Query 016009
Match_columns 397
No_of_seqs 381 out of 3342
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 02:57:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016009.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016009hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 7.2E-60 1.6E-64 433.8 25.5 280 112-396 62-350 (361)
2 PLN00113 leucine-rich repeat r 100.0 3.6E-52 7.8E-57 436.2 34.1 367 1-396 570-949 (968)
3 KOG0192 Tyrosine kinase specif 100.0 4E-53 8.7E-58 386.2 21.8 253 128-396 44-301 (362)
4 KOG0581 Mitogen-activated prot 100.0 1.5E-53 3.3E-58 371.0 17.3 254 126-394 80-335 (364)
5 KOG0575 Polo-like serine/threo 100.0 4.5E-52 9.7E-57 382.2 18.2 251 125-394 18-269 (592)
6 KOG0197 Tyrosine kinases [Sign 100.0 1.5E-51 3.2E-56 374.8 16.7 249 126-396 207-459 (468)
7 KOG0615 Serine/threonine prote 100.0 2.3E-51 4.9E-56 360.3 14.6 256 125-394 172-437 (475)
8 KOG0591 NIMA (never in mitosis 100.0 7.2E-52 1.6E-56 346.5 6.7 259 125-395 19-282 (375)
9 KOG0595 Serine/threonine-prote 100.0 7.4E-50 1.6E-54 351.0 19.1 202 124-334 9-217 (429)
10 KOG0598 Ribosomal protein S6 k 100.0 7.9E-50 1.7E-54 347.8 13.8 245 124-386 24-269 (357)
11 KOG1026 Nerve growth factor re 100.0 2E-49 4.4E-54 378.1 16.3 255 125-396 486-760 (774)
12 KOG0593 Predicted protein kina 100.0 3.6E-48 7.7E-53 327.5 14.5 261 125-393 2-283 (396)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 7.9E-49 1.7E-53 367.9 8.2 263 114-396 609-889 (996)
14 KOG0193 Serine/threonine prote 100.0 1.5E-47 3.3E-52 351.0 16.1 263 117-396 384-651 (678)
15 KOG0578 p21-activated serine/t 100.0 1.2E-47 2.7E-52 350.1 14.5 250 125-394 273-523 (550)
16 KOG0582 Ste20-like serine/thre 100.0 1.1E-46 2.4E-51 333.9 19.1 262 124-394 25-293 (516)
17 KOG4721 Serine/threonine prote 100.0 4E-47 8.7E-52 345.2 13.0 240 129-397 128-367 (904)
18 KOG0198 MEKK and related serin 100.0 1.6E-46 3.4E-51 332.7 16.2 252 125-395 17-277 (313)
19 KOG0592 3-phosphoinositide-dep 100.0 2.4E-46 5.1E-51 339.2 17.1 254 122-394 70-338 (604)
20 KOG0583 Serine/threonine prote 100.0 1.3E-45 2.8E-50 340.1 22.2 254 123-393 15-274 (370)
21 cd05102 PTKc_VEGFR3 Catalytic 100.0 6.3E-46 1.4E-50 344.7 19.2 257 123-396 5-332 (338)
22 KOG0201 Serine/threonine prote 100.0 8.9E-47 1.9E-51 334.2 10.9 250 125-394 13-263 (467)
23 KOG0659 Cdk activating kinase 100.0 1.9E-45 4.1E-50 305.7 18.0 262 125-394 2-281 (318)
24 KOG0600 Cdc2-related protein k 100.0 7.5E-46 1.6E-50 333.3 16.4 264 122-393 114-399 (560)
25 KOG0597 Serine-threonine prote 100.0 4E-46 8.7E-51 338.6 12.4 249 125-394 2-251 (808)
26 PHA02988 hypothetical protein; 100.0 1.7E-44 3.6E-49 326.4 21.6 245 130-396 25-277 (283)
27 cd05631 STKc_GRK4 Catalytic do 100.0 9.6E-45 2.1E-49 328.6 19.2 254 127-394 2-261 (285)
28 cd05096 PTKc_DDR1 Catalytic do 100.0 2.5E-44 5.5E-49 329.0 22.0 261 125-396 5-303 (304)
29 KOG0661 MAPK related serine/th 100.0 1.2E-45 2.7E-50 329.6 12.4 260 124-394 9-291 (538)
30 KOG1095 Protein tyrosine kinas 100.0 1.2E-44 2.6E-49 357.4 20.6 254 126-396 693-959 (1025)
31 KOG0616 cAMP-dependent protein 100.0 7.2E-45 1.6E-49 306.6 16.1 239 125-385 44-283 (355)
32 KOG0588 Serine/threonine prote 100.0 2.7E-45 5.9E-50 339.2 14.8 249 126-394 13-263 (786)
33 cd05571 STKc_PKB Catalytic dom 100.0 3.8E-45 8.3E-50 337.0 15.8 245 131-394 1-251 (323)
34 KOG0194 Protein tyrosine kinas 100.0 4.6E-45 1E-49 337.5 16.1 259 120-396 152-418 (474)
35 KOG0694 Serine/threonine prote 100.0 6E-45 1.3E-49 339.1 16.9 246 123-388 366-613 (694)
36 cd05104 PTKc_Kit Catalytic dom 100.0 2.6E-44 5.6E-49 337.6 19.8 255 124-396 34-372 (375)
37 cd05585 STKc_YPK1_like Catalyt 100.0 1E-44 2.2E-49 332.6 16.1 242 133-393 1-246 (312)
38 KOG0580 Serine/threonine prote 100.0 4.2E-45 9E-50 299.3 11.2 252 124-394 21-273 (281)
39 cd05612 STKc_PRKX_like Catalyt 100.0 9.6E-45 2.1E-49 329.5 14.9 248 125-394 1-254 (291)
40 cd05593 STKc_PKB_gamma Catalyt 100.0 2.5E-44 5.5E-49 332.0 17.8 245 131-394 1-251 (328)
41 KOG0589 Serine/threonine prote 100.0 4.8E-45 1E-49 331.2 12.3 254 124-394 3-258 (426)
42 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-44 4.9E-49 331.7 16.8 245 131-394 1-251 (323)
43 cd05106 PTKc_CSF-1R Catalytic 100.0 4.4E-44 9.5E-49 335.7 18.9 258 121-396 34-370 (374)
44 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.2E-43 2.6E-48 318.3 20.6 252 125-396 5-263 (266)
45 cd05584 STKc_p70S6K Catalytic 100.0 6.4E-44 1.4E-48 328.8 19.2 246 131-394 2-256 (323)
46 PTZ00263 protein kinase A cata 100.0 3.7E-44 8.1E-49 331.1 17.5 248 125-394 18-271 (329)
47 KOG1094 Discoidin domain recep 100.0 5.7E-44 1.2E-48 325.5 17.5 259 126-396 539-802 (807)
48 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-43 2.3E-48 317.7 18.9 255 122-396 3-259 (261)
49 cd06649 PKc_MEK2 Catalytic dom 100.0 2.8E-43 6.1E-48 325.6 22.2 259 124-394 4-301 (331)
50 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.8E-43 4E-48 320.7 20.5 261 125-394 5-285 (288)
51 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-43 3.7E-48 319.6 19.8 250 133-394 1-257 (280)
52 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.2E-44 1.1E-48 331.0 16.6 256 125-394 1-257 (333)
53 KOG0585 Ca2+/calmodulin-depend 100.0 5.6E-44 1.2E-48 318.8 15.9 258 122-395 94-373 (576)
54 KOG0605 NDR and related serine 100.0 6.4E-44 1.4E-48 323.5 16.3 253 123-393 139-444 (550)
55 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.9E-43 1.3E-47 312.0 22.0 250 125-396 4-256 (256)
56 PLN00034 mitogen-activated pro 100.0 1.6E-43 3.5E-48 330.2 19.0 248 126-394 75-328 (353)
57 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.6E-43 5.7E-48 322.1 20.0 262 124-394 4-288 (303)
58 KOG2345 Serine/threonine prote 100.0 5.3E-44 1.1E-48 294.2 13.6 260 124-396 20-298 (302)
59 PF07714 Pkinase_Tyr: Protein 100.0 4.5E-44 9.7E-49 319.6 14.4 248 130-395 4-259 (259)
60 cd08228 STKc_Nek6 Catalytic do 100.0 6.6E-43 1.4E-47 313.7 21.8 260 125-396 2-263 (267)
61 cd05048 PTKc_Ror Catalytic Dom 100.0 4.1E-43 9E-48 317.7 20.6 255 125-396 5-281 (283)
62 cd07848 STKc_CDKL5 Catalytic d 100.0 2.1E-43 4.5E-48 320.3 18.4 262 125-394 1-284 (287)
63 PTZ00426 cAMP-dependent protei 100.0 1.4E-43 2.9E-48 328.2 17.5 248 125-394 30-284 (340)
64 KOG1989 ARK protein kinase fam 100.0 2.6E-43 5.6E-48 337.8 19.3 250 126-395 38-308 (738)
65 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.1E-43 1.3E-47 329.3 21.4 258 122-396 34-395 (400)
66 cd05062 PTKc_IGF-1R Catalytic 100.0 4.6E-43 9.9E-48 316.4 19.7 257 123-396 4-276 (277)
67 KOG0611 Predicted serine/threo 100.0 6.4E-44 1.4E-48 312.6 13.6 249 125-394 53-303 (668)
68 cd05589 STKc_PKN Catalytic dom 100.0 4E-43 8.8E-48 323.7 19.3 248 127-394 1-257 (324)
69 cd05594 STKc_PKB_alpha Catalyt 100.0 1.6E-43 3.4E-48 326.6 16.5 245 131-394 1-252 (325)
70 cd05618 STKc_aPKC_iota Catalyt 100.0 4.3E-43 9.3E-48 323.9 19.3 252 131-393 1-261 (329)
71 cd05588 STKc_aPKC Catalytic do 100.0 4.4E-43 9.5E-48 324.0 19.4 253 131-394 1-262 (329)
72 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-42 2.9E-47 311.5 21.9 252 125-396 4-263 (266)
73 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-42 2.7E-47 309.8 21.5 252 126-394 1-253 (256)
74 cd05068 PTKc_Frk_like Catalyti 100.0 7.2E-43 1.6E-47 312.4 20.0 252 124-396 5-259 (261)
75 cd05590 STKc_nPKC_eta Catalyti 100.0 3.8E-43 8.3E-48 323.1 18.7 244 131-393 1-252 (320)
76 cd05605 STKc_GRK4_like Catalyt 100.0 4.2E-43 9E-48 317.9 18.6 255 126-394 1-261 (285)
77 cd05072 PTKc_Lyn Catalytic dom 100.0 9.5E-43 2.1E-47 311.6 20.7 252 124-396 5-259 (261)
78 cd05591 STKc_nPKC_epsilon Cata 100.0 4.2E-43 9.1E-48 323.2 18.8 245 131-394 1-254 (321)
79 KOG0599 Phosphorylase kinase g 100.0 5.3E-44 1.2E-48 298.1 11.4 256 124-394 16-283 (411)
80 cd05049 PTKc_Trk Catalytic dom 100.0 1.2E-42 2.6E-47 314.2 21.2 255 125-396 5-279 (280)
81 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.4E-42 3E-47 309.6 21.3 250 125-396 4-256 (256)
82 cd05587 STKc_cPKC Catalytic do 100.0 6.8E-43 1.5E-47 322.2 19.9 249 126-393 1-256 (324)
83 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-42 2.8E-47 311.7 21.1 260 125-396 2-263 (267)
84 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-42 4.7E-47 319.7 22.9 200 124-333 4-204 (333)
85 cd05614 STKc_MSK2_N N-terminal 100.0 2E-43 4.4E-48 327.0 16.1 255 126-394 1-267 (332)
86 cd05575 STKc_SGK Catalytic dom 100.0 1.5E-43 3.3E-48 326.4 14.9 240 131-389 1-242 (323)
87 cd05616 STKc_cPKC_beta Catalyt 100.0 7.2E-43 1.6E-47 321.9 19.3 244 126-388 1-246 (323)
88 cd05054 PTKc_VEGFR Catalytic d 100.0 5.7E-43 1.2E-47 323.9 18.7 258 123-396 5-331 (337)
89 cd06646 STKc_MAP4K5 Catalytic 100.0 2.1E-42 4.5E-47 310.5 21.7 254 125-395 9-266 (267)
90 KOG0663 Protein kinase PITSLRE 100.0 3.9E-43 8.4E-48 300.7 16.0 262 124-394 75-361 (419)
91 cd05592 STKc_nPKC_theta_delta 100.0 4.3E-43 9.3E-48 322.2 17.2 243 131-392 1-246 (316)
92 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.3E-43 1.1E-47 325.2 18.0 260 126-394 1-290 (338)
93 cd07862 STKc_CDK6 Catalytic do 100.0 1.2E-42 2.7E-47 315.8 19.9 261 126-394 2-287 (290)
94 cd05626 STKc_LATS2 Catalytic d 100.0 6.3E-43 1.4E-47 329.3 18.6 252 126-394 2-305 (381)
95 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5E-42 1.1E-46 307.8 23.6 260 125-396 2-263 (267)
96 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-43 3.6E-48 330.1 14.4 252 125-394 1-285 (350)
97 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-42 2.7E-47 319.5 19.7 250 125-396 7-266 (316)
98 cd05570 STKc_PKC Catalytic dom 100.0 1E-42 2.2E-47 320.1 19.0 245 131-394 1-252 (318)
99 PTZ00267 NIMA-related protein 100.0 1.6E-42 3.5E-47 334.9 21.3 251 126-394 68-323 (478)
100 KOG0574 STE20-like serine/thre 100.0 8.7E-45 1.9E-49 306.8 4.6 248 127-394 35-283 (502)
101 cd05628 STKc_NDR1 Catalytic do 100.0 8.9E-43 1.9E-47 326.3 18.7 203 125-334 1-239 (363)
102 KOG3653 Transforming growth fa 100.0 2.1E-42 4.7E-47 308.7 20.1 256 127-395 212-500 (534)
103 cd05599 STKc_NDR_like Catalyti 100.0 3.2E-43 7E-48 329.8 15.7 252 125-394 1-296 (364)
104 cd05052 PTKc_Abl Catalytic dom 100.0 2.1E-42 4.5E-47 309.8 20.2 252 125-396 6-260 (263)
105 cd05596 STKc_ROCK Catalytic do 100.0 2.9E-43 6.3E-48 329.9 15.3 254 123-394 41-304 (370)
106 PHA03212 serine/threonine kina 100.0 2.7E-42 5.9E-47 324.7 21.7 253 125-394 92-376 (391)
107 cd05090 PTKc_Ror1 Catalytic do 100.0 2.3E-42 5E-47 312.8 20.5 253 125-396 5-281 (283)
108 cd05582 STKc_RSK_N N-terminal 100.0 3.6E-43 7.9E-48 323.3 15.4 240 131-390 2-245 (318)
109 cd05093 PTKc_TrkB Catalytic do 100.0 3.9E-42 8.4E-47 312.1 21.8 254 125-396 5-277 (288)
110 cd05084 PTKc_Fes Catalytic dom 100.0 4E-42 8.6E-47 305.9 21.4 247 132-397 2-252 (252)
111 cd05619 STKc_nPKC_theta Cataly 100.0 8.2E-43 1.8E-47 320.2 17.1 242 131-393 1-247 (316)
112 cd05620 STKc_nPKC_delta Cataly 100.0 6.4E-43 1.4E-47 321.1 16.2 243 131-392 1-246 (316)
113 cd05607 STKc_GRK7 Catalytic do 100.0 2.5E-42 5.5E-47 311.4 19.7 248 133-393 1-249 (277)
114 cd05604 STKc_SGK3 Catalytic do 100.0 2.8E-43 6E-48 325.0 13.5 241 131-390 1-243 (325)
115 cd05059 PTKc_Tec_like Catalyti 100.0 5E-42 1.1E-46 306.0 21.1 250 126-396 5-256 (256)
116 cd05094 PTKc_TrkC Catalytic do 100.0 5.1E-42 1.1E-46 311.8 21.3 254 125-396 5-280 (291)
117 cd05602 STKc_SGK1 Catalytic do 100.0 4E-43 8.6E-48 323.9 14.0 241 131-390 1-243 (325)
118 cd06637 STKc_TNIK Catalytic do 100.0 2.6E-42 5.7E-47 310.6 18.9 254 122-394 3-269 (272)
119 cd06612 STKc_MST1_2 Catalytic 100.0 7.6E-42 1.7E-46 304.7 21.7 250 125-394 3-253 (256)
120 cd05621 STKc_ROCK2 Catalytic d 100.0 8.2E-43 1.8E-47 326.5 16.1 255 122-394 40-304 (370)
121 PTZ00283 serine/threonine prot 100.0 1.4E-42 3E-47 335.5 18.1 256 123-394 30-297 (496)
122 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.8E-42 8.2E-47 307.5 19.6 252 124-396 5-258 (260)
123 KOG0594 Protein kinase PCTAIRE 100.0 5.5E-42 1.2E-46 298.6 19.9 264 125-394 11-302 (323)
124 KOG0032 Ca2+/calmodulin-depend 100.0 6.9E-42 1.5E-46 315.1 21.6 254 124-394 34-293 (382)
125 cd05629 STKc_NDR_like_fungal C 100.0 8.1E-43 1.8E-47 328.4 15.8 252 125-394 1-305 (377)
126 cd05603 STKc_SGK2 Catalytic do 100.0 5.7E-43 1.2E-47 322.4 14.4 240 131-389 1-242 (321)
127 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.7E-42 1.7E-46 305.5 21.2 250 125-396 6-258 (260)
128 cd06654 STKc_PAK1 Catalytic do 100.0 8.4E-42 1.8E-46 311.0 21.5 250 125-394 20-270 (296)
129 cd05615 STKc_cPKC_alpha Cataly 100.0 3.1E-42 6.7E-47 317.5 18.9 244 126-388 1-246 (323)
130 cd05617 STKc_aPKC_zeta Catalyt 100.0 4E-42 8.7E-47 317.3 19.7 246 131-388 1-248 (327)
131 cd05601 STKc_CRIK Catalytic do 100.0 4.5E-43 9.8E-48 324.4 13.2 251 125-394 1-263 (330)
132 cd05097 PTKc_DDR_like Catalyti 100.0 9.7E-42 2.1E-46 310.6 21.7 261 125-396 5-294 (295)
133 cd05598 STKc_LATS Catalytic do 100.0 7.4E-43 1.6E-47 328.6 14.8 254 125-394 1-301 (376)
134 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-41 2.3E-46 304.9 21.5 251 125-396 6-258 (262)
135 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-41 2.4E-46 304.9 21.6 255 125-395 2-261 (263)
136 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.8E-42 1E-46 323.1 19.9 258 121-396 33-397 (401)
137 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-42 3.5E-47 326.9 16.7 251 126-394 2-305 (382)
138 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.5E-42 2.1E-46 308.8 21.0 257 128-396 7-279 (283)
139 cd05045 PTKc_RET Catalytic dom 100.0 9.9E-42 2.2E-46 309.8 21.2 254 126-396 1-284 (290)
140 cd05091 PTKc_Ror2 Catalytic do 100.0 6.5E-42 1.4E-46 309.9 19.9 254 126-396 6-281 (283)
141 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-41 3.1E-46 306.9 21.9 250 125-396 7-266 (279)
142 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-41 2.4E-46 304.0 20.8 243 132-396 2-253 (257)
143 cd05032 PTKc_InsR_like Catalyt 100.0 1.1E-41 2.5E-46 307.3 20.9 255 124-396 5-276 (277)
144 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.1E-42 1.7E-46 308.3 19.9 255 123-396 4-276 (277)
145 cd05051 PTKc_DDR Catalytic dom 100.0 1.8E-41 3.9E-46 309.0 22.3 262 124-396 4-295 (296)
146 cd05055 PTKc_PDGFR Catalytic d 100.0 9.6E-42 2.1E-46 311.4 20.5 256 124-396 34-299 (302)
147 cd06624 STKc_ASK Catalytic dom 100.0 1.6E-41 3.4E-46 304.9 21.6 259 120-394 3-265 (268)
148 KOG0033 Ca2+/calmodulin-depend 100.0 3.3E-44 7E-49 295.0 3.7 254 124-394 10-267 (355)
149 PRK13184 pknD serine/threonine 100.0 9.4E-42 2E-46 339.1 22.0 259 125-396 2-288 (932)
150 cd08219 STKc_Nek3 Catalytic do 100.0 9.5E-42 2.1E-46 304.0 20.0 251 126-394 1-252 (255)
151 cd05061 PTKc_InsR Catalytic do 100.0 9.3E-42 2E-46 309.6 20.2 258 122-396 3-276 (288)
152 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3E-41 6.5E-46 305.7 23.4 259 125-396 4-281 (284)
153 cd05085 PTKc_Fer Catalytic dom 100.0 1.5E-41 3.3E-46 301.8 21.0 246 132-396 2-249 (250)
154 cd05095 PTKc_DDR2 Catalytic do 100.0 1.8E-41 4E-46 308.9 22.0 261 125-396 5-295 (296)
155 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-41 3.6E-46 303.5 21.3 253 123-396 4-259 (261)
156 cd05115 PTKc_Zap-70 Catalytic 100.0 1.7E-41 3.8E-46 302.6 21.0 244 133-396 3-253 (257)
157 cd05039 PTKc_Csk_like Catalyti 100.0 2.1E-41 4.6E-46 301.9 21.4 249 124-396 5-254 (256)
158 cd05069 PTKc_Yes Catalytic dom 100.0 3E-41 6.6E-46 301.7 22.4 250 125-396 6-258 (260)
159 cd00192 PTKc Catalytic domain 100.0 3.6E-41 7.7E-46 301.2 22.8 248 131-396 1-262 (262)
160 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-41 4.6E-46 305.0 21.3 250 125-394 1-251 (274)
161 cd05092 PTKc_TrkA Catalytic do 100.0 1.6E-41 3.6E-46 306.7 20.6 253 125-396 5-279 (280)
162 cd06655 STKc_PAK2 Catalytic do 100.0 1.4E-41 2.9E-46 309.5 20.1 250 125-394 19-269 (296)
163 cd05632 STKc_GRK5 Catalytic do 100.0 1.1E-41 2.4E-46 308.5 19.5 253 127-393 2-260 (285)
164 cd07861 STKc_CDK1_euk Catalyti 100.0 1.5E-41 3.2E-46 307.9 20.3 263 126-394 1-282 (285)
165 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.4E-41 5.2E-46 303.7 21.4 253 124-396 4-265 (268)
166 cd05630 STKc_GRK6 Catalytic do 100.0 9.9E-42 2.2E-46 308.8 19.0 254 127-394 2-261 (285)
167 cd05075 PTKc_Axl Catalytic dom 100.0 3.6E-41 7.8E-46 303.2 22.5 252 128-396 2-269 (272)
168 PF00069 Pkinase: Protein kina 100.0 1.5E-42 3.2E-47 310.0 13.4 255 127-394 1-257 (260)
169 cd05089 PTKc_Tie1 Catalytic do 100.0 1.7E-41 3.7E-46 309.3 20.6 253 125-396 2-273 (297)
170 cd08221 STKc_Nek9 Catalytic do 100.0 3.3E-41 7.2E-46 300.7 22.0 253 126-395 1-254 (256)
171 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.6E-41 3.4E-46 311.2 20.4 261 125-394 6-286 (309)
172 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-41 3.1E-46 307.2 19.8 256 124-396 5-274 (280)
173 cd05622 STKc_ROCK1 Catalytic d 100.0 3.9E-42 8.4E-47 322.2 16.6 260 118-395 36-305 (371)
174 cd06656 STKc_PAK3 Catalytic do 100.0 3.1E-41 6.7E-46 307.4 22.0 249 125-393 19-268 (297)
175 cd06619 PKc_MKK5 Catalytic dom 100.0 2.8E-41 6.1E-46 305.0 21.6 251 126-394 2-253 (279)
176 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5E-41 1.1E-45 301.8 23.0 252 132-396 2-268 (269)
177 cd05053 PTKc_FGFR Catalytic do 100.0 7.8E-42 1.7E-46 310.9 18.0 257 122-396 9-289 (293)
178 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-41 3.5E-46 307.8 19.9 264 115-395 8-284 (286)
179 cd05050 PTKc_Musk Catalytic do 100.0 2.1E-41 4.5E-46 307.4 20.6 256 124-396 4-287 (288)
180 cd05066 PTKc_EphR_A Catalytic 100.0 2.5E-41 5.4E-46 303.5 20.9 252 125-396 4-264 (267)
181 KOG0577 Serine/threonine prote 100.0 6.3E-43 1.4E-47 319.2 10.3 247 127-394 28-278 (948)
182 cd05098 PTKc_FGFR1 Catalytic d 100.0 2E-41 4.4E-46 310.2 20.1 256 124-396 17-297 (307)
183 KOG0610 Putative serine/threon 100.0 1.4E-41 3.1E-46 299.1 17.9 253 126-393 78-391 (459)
184 cd05035 PTKc_Axl_like Catalyti 100.0 5E-41 1.1E-45 302.4 22.1 254 127-396 1-270 (273)
185 cd06645 STKc_MAP4K3 Catalytic 100.0 1.9E-41 4.1E-46 304.2 19.3 253 125-394 9-265 (267)
186 cd05109 PTKc_HER2 Catalytic do 100.0 3E-41 6.5E-46 304.9 20.7 251 124-396 6-266 (279)
187 cd08223 STKc_Nek4 Catalytic do 100.0 4.6E-41 1E-45 299.9 21.5 252 126-394 1-254 (257)
188 cd06640 STKc_MST4 Catalytic do 100.0 7.4E-41 1.6E-45 302.0 23.0 248 126-394 5-253 (277)
189 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-41 3.2E-46 310.4 18.3 253 125-396 7-278 (303)
190 cd08227 PK_STRAD_alpha Pseudok 100.0 3.7E-41 8E-46 311.1 21.1 259 130-394 3-307 (327)
191 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 9.9E-41 2.1E-45 298.6 23.1 239 132-396 2-262 (262)
192 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.6E-41 5.7E-46 313.9 20.1 256 124-396 6-337 (343)
193 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.9E-41 4.1E-46 305.9 18.6 248 126-394 5-253 (277)
194 cd07876 STKc_JNK2 Catalytic do 100.0 4.7E-41 1E-45 314.4 21.8 260 123-394 19-315 (359)
195 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.7E-41 1.5E-45 300.5 22.0 258 125-394 1-264 (267)
196 cd06613 STKc_MAP4K3_like Catal 100.0 4.6E-41 1E-45 300.7 20.9 255 124-394 2-260 (262)
197 cd08218 STKc_Nek1 Catalytic do 100.0 3.2E-41 7E-46 300.8 19.8 252 126-394 1-253 (256)
198 cd05040 PTKc_Ack_like Catalyti 100.0 4.7E-41 1E-45 299.9 20.7 248 131-396 1-256 (257)
199 cd06643 STKc_SLK Catalytic dom 100.0 4.5E-41 9.8E-46 304.2 20.9 250 127-394 7-262 (282)
200 cd06644 STKc_STK10_LOK Catalyt 100.0 7E-41 1.5E-45 304.5 22.2 252 125-394 12-269 (292)
201 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-41 3.1E-46 319.3 18.2 260 126-394 1-288 (372)
202 cd05060 PTKc_Syk_like Catalyti 100.0 5.9E-41 1.3E-45 299.3 21.2 245 131-396 1-253 (257)
203 KOG4278 Protein tyrosine kinas 100.0 2E-42 4.3E-47 317.5 11.9 258 117-396 259-521 (1157)
204 cd05627 STKc_NDR2 Catalytic do 100.0 4.6E-42 1E-46 321.2 14.7 252 125-394 1-293 (360)
205 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.5E-41 9.6E-46 307.6 20.8 255 124-396 14-294 (304)
206 cd06615 PKc_MEK Catalytic doma 100.0 6.5E-41 1.4E-45 306.9 21.8 258 125-394 1-287 (308)
207 cd06611 STKc_SLK_like Catalyti 100.0 3E-41 6.6E-46 305.0 19.3 253 124-394 4-262 (280)
208 cd06631 STKc_YSK4 Catalytic do 100.0 6.7E-41 1.4E-45 300.3 21.2 253 126-393 1-261 (265)
209 cd05082 PTKc_Csk Catalytic dom 100.0 5.6E-41 1.2E-45 299.3 20.6 247 125-396 6-254 (256)
210 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.3E-40 2.8E-45 301.5 23.2 259 126-396 5-281 (284)
211 cd05042 PTKc_Aatyk Catalytic d 100.0 4.1E-41 8.8E-46 302.4 19.8 252 132-396 2-268 (269)
212 KOG0660 Mitogen-activated prot 100.0 1.2E-41 2.7E-46 295.5 15.4 262 124-394 21-310 (359)
213 cd05112 PTKc_Itk Catalytic dom 100.0 1E-40 2.2E-45 297.5 21.8 251 125-396 4-256 (256)
214 cd05065 PTKc_EphR_B Catalytic 100.0 4E-41 8.7E-46 302.4 19.3 251 126-396 5-266 (269)
215 cd06628 STKc_MAPKKK_Byr2_like 100.0 9E-41 1.9E-45 299.8 21.4 251 127-394 2-264 (267)
216 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.3E-41 2E-45 300.7 21.4 239 132-396 2-274 (274)
217 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.5E-41 1.2E-45 304.2 20.1 262 125-394 1-283 (286)
218 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.4E-41 1.6E-45 307.4 20.8 255 124-396 11-291 (314)
219 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.5E-41 1.2E-45 304.3 19.7 255 125-394 1-262 (286)
220 cd05073 PTKc_Hck Catalytic dom 100.0 7.8E-41 1.7E-45 299.0 20.2 252 124-396 5-258 (260)
221 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.7E-41 1.5E-45 303.1 20.0 260 116-394 7-279 (282)
222 cd07874 STKc_JNK3 Catalytic do 100.0 6E-41 1.3E-45 313.3 20.1 261 122-394 14-311 (355)
223 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.6E-41 9.9E-46 304.5 18.4 259 125-395 5-267 (284)
224 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-40 2.7E-45 299.0 21.0 252 132-396 2-267 (268)
225 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.6E-41 1.9E-45 305.2 20.2 261 125-394 6-286 (301)
226 PTZ00036 glycogen synthase kin 100.0 3.6E-41 7.9E-46 321.9 18.5 258 124-394 65-351 (440)
227 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-40 3.1E-45 299.0 21.2 247 131-396 1-266 (270)
228 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-40 2.3E-45 302.7 20.4 261 126-394 1-285 (288)
229 PTZ00266 NIMA-related protein 100.0 2.2E-41 4.9E-46 337.7 17.3 258 121-393 9-294 (1021)
230 cd06639 STKc_myosinIIIB Cataly 100.0 8.9E-41 1.9E-45 303.7 19.7 262 116-394 13-287 (291)
231 cd05041 PTKc_Fes_like Catalyti 100.0 2.1E-40 4.6E-45 294.6 21.7 246 131-397 1-251 (251)
232 cd08528 STKc_Nek10 Catalytic d 100.0 1.8E-40 3.9E-45 298.2 21.4 258 126-396 1-268 (269)
233 cd07868 STKc_CDK8 Catalytic do 100.0 2.3E-40 5E-45 304.7 22.4 194 130-333 6-218 (317)
234 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.2E-40 4.8E-45 300.4 21.9 259 125-394 1-266 (287)
235 KOG0658 Glycogen synthase kina 100.0 8.3E-42 1.8E-46 297.0 11.9 256 126-394 25-306 (364)
236 PHA03211 serine/threonine kina 100.0 9E-41 2E-45 318.2 19.9 191 125-331 169-362 (461)
237 cd06658 STKc_PAK5 Catalytic do 100.0 4.6E-41 1E-45 305.4 17.2 247 128-394 25-272 (292)
238 cd08217 STKc_Nek2 Catalytic do 100.0 2.2E-40 4.8E-45 296.6 21.3 256 126-394 1-262 (265)
239 cd05586 STKc_Sck1_like Catalyt 100.0 1.8E-41 4E-46 313.6 14.5 243 133-393 1-252 (330)
240 KOG2052 Activin A type IB rece 100.0 2.8E-40 6.1E-45 293.1 21.2 259 124-395 210-500 (513)
241 cd06659 STKc_PAK6 Catalytic do 100.0 6.9E-41 1.5E-45 305.1 17.6 246 129-394 25-271 (297)
242 cd05597 STKc_DMPK_like Catalyt 100.0 6.5E-41 1.4E-45 309.8 17.7 255 125-394 1-266 (331)
243 cd06647 STKc_PAK_I Catalytic d 100.0 2.9E-40 6.2E-45 300.4 21.6 250 125-394 19-269 (293)
244 cd05058 PTKc_Met_Ron Catalytic 100.0 3.4E-40 7.3E-45 295.2 21.7 247 131-396 1-257 (262)
245 cd06623 PKc_MAPKK_plant_like C 100.0 4.4E-40 9.6E-45 294.6 22.4 253 125-394 1-256 (264)
246 cd06605 PKc_MAPKK Catalytic do 100.0 9.9E-41 2.1E-45 299.2 18.1 255 125-394 1-257 (265)
247 cd05574 STKc_phototropin_like 100.0 3.1E-40 6.7E-45 303.7 21.8 255 125-394 1-289 (316)
248 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.2E-40 7E-45 294.8 21.1 238 131-396 1-259 (259)
249 cd07875 STKc_JNK1 Catalytic do 100.0 2.3E-40 5E-45 310.3 21.1 260 123-394 22-318 (364)
250 cd06917 STKc_NAK1_like Catalyt 100.0 5.1E-40 1.1E-44 296.6 22.5 249 126-394 2-255 (277)
251 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.4E-40 2.9E-45 301.7 18.8 262 125-394 1-283 (286)
252 KOG0579 Ste20-like serine/thre 100.0 2.6E-42 5.7E-47 317.3 7.6 252 125-394 32-289 (1187)
253 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.9E-40 6.2E-45 299.2 20.7 262 125-396 4-281 (284)
254 KOG1025 Epidermal growth facto 100.0 2.2E-41 4.7E-46 319.3 13.7 247 127-395 698-954 (1177)
255 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-40 3.8E-45 299.0 19.0 256 122-394 3-272 (275)
256 cd06651 STKc_MEKK3 Catalytic d 100.0 5.4E-40 1.2E-44 294.6 22.1 253 125-394 2-261 (266)
257 cd05046 PTK_CCK4 Pseudokinase 100.0 4.5E-40 9.7E-45 296.6 21.6 256 125-396 5-274 (275)
258 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.5E-40 5.5E-45 306.5 20.3 254 125-396 12-291 (334)
259 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.3E-40 2.8E-45 297.3 17.7 239 132-396 2-258 (258)
260 cd05044 PTKc_c-ros Catalytic d 100.0 2.4E-40 5.2E-45 297.4 19.5 248 131-396 1-268 (269)
261 cd06614 STKc_PAK Catalytic dom 100.0 4.1E-40 8.9E-45 298.6 21.1 253 123-394 17-270 (286)
262 cd05083 PTKc_Chk Catalytic dom 100.0 2.5E-40 5.5E-45 294.7 19.3 246 125-396 6-252 (254)
263 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.4E-40 1.2E-44 298.6 21.6 263 123-394 3-288 (291)
264 PHA03209 serine/threonine kina 100.0 8.4E-41 1.8E-45 312.0 16.7 191 123-330 64-255 (357)
265 cd05624 STKc_MRCK_beta Catalyt 100.0 7.3E-41 1.6E-45 309.4 16.1 255 125-394 1-266 (331)
266 KOG4257 Focal adhesion tyrosin 100.0 1.5E-40 3.2E-45 305.3 17.7 247 129-396 393-647 (974)
267 cd06641 STKc_MST3 Catalytic do 100.0 6E-40 1.3E-44 296.1 21.5 248 126-394 5-253 (277)
268 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-40 2.3E-45 308.6 16.9 255 125-394 1-266 (332)
269 cd07860 STKc_CDK2_3 Catalytic 100.0 2.3E-40 5E-45 299.9 18.8 262 126-394 1-281 (284)
270 cd05609 STKc_MAST Catalytic do 100.0 3.5E-40 7.7E-45 301.7 20.1 255 125-395 1-271 (305)
271 cd07841 STKc_CDK7 Catalytic do 100.0 3.1E-40 6.8E-45 301.1 19.7 263 126-394 1-282 (298)
272 cd05580 STKc_PKA Catalytic dom 100.0 4.3E-40 9.4E-45 299.0 20.5 247 125-393 1-253 (290)
273 cd06626 STKc_MEKK4 Catalytic d 100.0 7E-40 1.5E-44 293.4 21.4 252 126-393 1-260 (264)
274 cd06632 STKc_MEKK1_plant Catal 100.0 5.4E-40 1.2E-44 293.1 20.4 252 126-394 1-255 (258)
275 cd06652 STKc_MEKK2 Catalytic d 100.0 9.8E-40 2.1E-44 292.8 22.2 252 125-394 2-261 (265)
276 cd07839 STKc_CDK5 Catalytic do 100.0 2.3E-40 5E-45 299.9 18.2 261 126-394 1-281 (284)
277 cd08220 STKc_Nek8 Catalytic do 100.0 7.3E-40 1.6E-44 291.9 21.2 251 126-394 1-253 (256)
278 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.4E-40 5.1E-45 307.9 18.7 260 122-394 12-298 (343)
279 cd05057 PTKc_EGFR_like Catalyt 100.0 9.1E-40 2E-44 295.2 22.0 251 125-396 7-266 (279)
280 cd06648 STKc_PAK_II Catalytic 100.0 5.6E-40 1.2E-44 297.4 20.6 249 126-394 20-269 (285)
281 cd05110 PTKc_HER4 Catalytic do 100.0 3.9E-40 8.4E-45 301.1 19.7 250 125-396 7-266 (303)
282 cd07844 STKc_PCTAIRE_like Cata 100.0 5.6E-40 1.2E-44 298.4 20.3 261 125-394 5-288 (291)
283 cd05056 PTKc_FAK Catalytic dom 100.0 4.3E-40 9.4E-45 295.9 19.4 252 125-396 6-263 (270)
284 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.6E-40 1.4E-44 295.0 20.6 257 126-394 2-269 (272)
285 PTZ00284 protein kinase; Provi 100.0 2.3E-40 5E-45 319.7 18.7 262 118-394 122-438 (467)
286 PHA03207 serine/threonine kina 100.0 3.7E-40 8E-45 311.4 19.7 255 124-394 91-375 (392)
287 KOG4717 Serine/threonine prote 100.0 2.3E-40 5.1E-45 298.1 17.1 248 126-393 19-269 (864)
288 smart00219 TyrKc Tyrosine kina 100.0 1.4E-39 3.1E-44 290.3 22.2 249 128-395 2-258 (258)
289 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-39 2.4E-44 292.8 21.2 256 126-394 1-264 (268)
290 cd07867 STKc_CDC2L6 Catalytic 100.0 1.4E-39 3.1E-44 299.5 22.4 193 131-333 7-218 (317)
291 cd06607 STKc_TAO Catalytic dom 100.0 1.8E-39 3.8E-44 297.4 22.7 249 125-394 15-267 (307)
292 cd08225 STKc_Nek5 Catalytic do 100.0 5.7E-40 1.2E-44 292.8 18.9 252 126-394 1-254 (257)
293 cd07835 STKc_CDK1_like Catalyt 100.0 6.5E-40 1.4E-44 296.8 19.2 261 127-394 1-280 (283)
294 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-39 2.5E-44 295.9 20.6 261 126-394 2-285 (288)
295 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-39 3.4E-44 294.4 20.5 262 126-394 1-281 (284)
296 cd05122 PKc_STE Catalytic doma 100.0 2.7E-39 5.9E-44 287.2 21.7 250 126-394 1-251 (253)
297 cd05577 STKc_GRK Catalytic dom 100.0 1.3E-39 2.9E-44 293.8 19.8 246 133-393 1-253 (277)
298 cd07832 STKc_CCRK Catalytic do 100.0 1.7E-39 3.8E-44 294.4 20.5 261 126-394 1-282 (286)
299 cd07843 STKc_CDC2L1 Catalytic 100.0 1.9E-39 4.1E-44 295.3 20.0 262 125-394 5-290 (293)
300 cd06617 PKc_MKK3_6 Catalytic d 100.0 2E-39 4.3E-44 293.6 20.1 253 125-394 1-261 (283)
301 KOG4279 Serine/threonine prote 100.0 1.7E-40 3.6E-45 308.3 13.0 244 132-393 582-831 (1226)
302 KOG0596 Dual specificity; seri 100.0 3E-40 6.5E-45 299.9 14.2 254 124-394 360-627 (677)
303 KOG0667 Dual-specificity tyros 100.0 7.7E-40 1.7E-44 304.7 17.2 194 126-332 187-389 (586)
304 cd07837 STKc_CdkB_plant Cataly 100.0 2.3E-39 5E-44 295.0 19.8 264 125-394 1-291 (295)
305 cd06657 STKc_PAK4 Catalytic do 100.0 1.8E-39 3.9E-44 294.9 18.9 244 131-394 26-270 (292)
306 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.4E-39 7.4E-44 290.5 20.6 253 127-396 1-270 (273)
307 cd05578 STKc_Yank1 Catalytic d 100.0 6.8E-40 1.5E-44 292.6 15.4 251 126-393 1-254 (258)
308 cd06635 STKc_TAO1 Catalytic do 100.0 8.8E-39 1.9E-43 294.0 23.0 248 127-395 27-278 (317)
309 cd05633 STKc_GRK3 Catalytic do 100.0 4E-39 8.7E-44 290.8 20.3 245 132-394 1-255 (279)
310 cd06606 STKc_MAPKKK Catalytic 100.0 9.6E-39 2.1E-43 284.9 22.3 251 126-394 1-257 (260)
311 cd06616 PKc_MKK4 Catalytic dom 100.0 2.2E-39 4.7E-44 294.1 18.1 253 126-394 5-267 (288)
312 cd05572 STKc_cGK_PKG Catalytic 100.0 7.6E-39 1.7E-43 286.5 21.2 243 133-393 1-251 (262)
313 KOG0584 Serine/threonine prote 100.0 1.6E-40 3.4E-45 306.7 10.3 247 130-393 45-295 (632)
314 KOG0199 ACK and related non-re 100.0 1.1E-39 2.3E-44 303.1 15.7 244 130-394 115-368 (1039)
315 cd07845 STKc_CDK10 Catalytic d 100.0 3.3E-39 7.1E-44 295.9 18.7 263 124-394 6-290 (309)
316 PLN00009 cyclin-dependent kina 100.0 7.1E-39 1.5E-43 291.6 20.7 263 125-394 2-284 (294)
317 cd05611 STKc_Rim15_like Cataly 100.0 4.6E-39 9.9E-44 287.6 19.1 245 131-394 2-248 (260)
318 KOG0983 Mitogen-activated prot 100.0 4E-40 8.6E-45 275.0 10.6 252 126-394 93-349 (391)
319 cd06627 STKc_Cdc7_like Catalyt 100.0 9.1E-39 2E-43 284.4 20.2 249 126-393 1-250 (254)
320 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-38 2.7E-43 284.1 20.9 253 126-394 1-255 (258)
321 cd08530 STKc_CNK2-like Catalyt 100.0 6.6E-39 1.4E-43 285.7 18.7 251 126-394 1-253 (256)
322 KOG0986 G protein-coupled rece 100.0 2.6E-40 5.6E-45 293.7 9.1 251 124-388 184-435 (591)
323 cd05579 STKc_MAST_like Catalyt 100.0 4.1E-39 8.8E-44 288.4 16.8 246 133-395 1-255 (265)
324 cd07850 STKc_JNK Catalytic dom 100.0 2.3E-38 4.9E-43 295.6 22.0 260 123-394 14-311 (353)
325 cd05613 STKc_MSK1_N N-terminal 100.0 9.4E-39 2E-43 290.2 18.8 255 126-394 1-268 (290)
326 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.4E-38 5.3E-43 283.5 21.2 253 125-394 2-261 (264)
327 PHA02882 putative serine/threo 100.0 1.7E-38 3.8E-43 288.8 20.4 260 125-396 12-294 (294)
328 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-38 2.3E-43 293.5 19.0 264 126-394 1-313 (316)
329 cd07831 STKc_MOK Catalytic dom 100.0 2.4E-38 5.2E-43 286.3 20.7 257 127-394 1-279 (282)
330 cd05118 STKc_CMGC Catalytic do 100.0 1.9E-38 4.2E-43 287.1 20.0 260 127-394 1-280 (283)
331 KOG0586 Serine/threonine prote 100.0 3.7E-39 8.1E-44 297.2 15.4 250 124-394 55-306 (596)
332 cd05583 STKc_MSK_N N-terminal 100.0 5.6E-39 1.2E-43 291.4 16.4 257 126-396 1-265 (288)
333 PHA03390 pk1 serine/threonine- 100.0 3.1E-38 6.8E-43 283.2 20.9 250 118-394 7-262 (267)
334 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-38 2.9E-43 290.0 18.8 254 124-394 14-273 (296)
335 cd06633 STKc_TAO3 Catalytic do 100.0 4E-38 8.7E-43 289.0 22.0 247 127-394 23-273 (313)
336 cd07838 STKc_CDK4_6_like Catal 100.0 6.3E-38 1.4E-42 284.3 22.8 260 127-394 1-284 (287)
337 cd08216 PK_STRAD Pseudokinase 100.0 2.9E-38 6.3E-43 290.3 20.7 256 132-394 9-295 (314)
338 cd06634 STKc_TAO2 Catalytic do 100.0 2.2E-38 4.7E-43 290.2 19.6 249 126-395 16-268 (308)
339 cd07852 STKc_MAPK15 Catalytic 100.0 1.4E-38 3.1E-43 295.2 18.6 262 123-394 5-295 (337)
340 cd07840 STKc_CDK9_like Catalyt 100.0 2.6E-38 5.7E-43 286.7 19.5 260 127-394 1-284 (287)
341 cd07864 STKc_CDK12 Catalytic d 100.0 2.6E-38 5.7E-43 289.0 19.4 265 122-394 4-299 (302)
342 cd07865 STKc_CDK9 Catalytic do 100.0 6.4E-38 1.4E-42 287.5 22.1 263 124-394 11-307 (310)
343 cd07849 STKc_ERK1_2_like Catal 100.0 1E-38 2.2E-43 296.0 16.8 260 124-394 4-292 (336)
344 PHA03210 serine/threonine kina 100.0 1.1E-38 2.5E-43 309.2 17.8 268 123-394 146-454 (501)
345 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.2E-38 2.5E-43 295.6 17.1 262 124-394 4-291 (337)
346 cd08226 PK_STRAD_beta Pseudoki 100.0 7.2E-38 1.6E-42 289.3 22.0 255 132-394 5-308 (328)
347 cd07855 STKc_ERK5 Catalytic do 100.0 1.3E-38 2.8E-43 295.1 16.6 262 124-394 4-294 (334)
348 cd05606 STKc_beta_ARK Catalyti 100.0 5.8E-38 1.3E-42 283.2 20.4 245 132-394 1-255 (278)
349 cd05581 STKc_PDK1 Catalytic do 100.0 1.9E-38 4.2E-43 286.6 17.3 251 125-394 1-277 (280)
350 KOG1024 Receptor-like protein 100.0 1.6E-38 3.5E-43 277.5 15.3 261 118-395 277-552 (563)
351 cd07830 STKc_MAK_like Catalyti 100.0 9.7E-38 2.1E-42 282.5 20.8 259 127-394 1-280 (283)
352 KOG0607 MAP kinase-interacting 100.0 1.8E-38 3.8E-43 270.6 14.7 262 117-393 75-360 (463)
353 KOG0200 Fibroblast/platelet-de 100.0 2.6E-38 5.7E-43 311.3 17.8 260 120-396 291-577 (609)
354 PTZ00024 cyclin-dependent prot 100.0 8.9E-38 1.9E-42 289.7 20.2 262 126-394 9-313 (335)
355 KOG1035 eIF-2alpha kinase GCN2 100.0 8.9E-39 1.9E-43 313.5 14.0 255 121-393 475-870 (1351)
356 cd08222 STKc_Nek11 Catalytic d 100.0 3.9E-38 8.4E-43 281.6 17.0 254 126-394 1-257 (260)
357 cd07834 STKc_MAPK Catalytic do 100.0 3.6E-38 7.8E-43 291.8 17.3 260 126-394 1-289 (330)
358 KOG4250 TANK binding protein k 100.0 2.3E-38 4.9E-43 296.1 15.6 253 127-386 15-296 (732)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.1E-38 2E-42 288.3 19.0 262 120-394 5-288 (328)
360 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-37 3.9E-42 275.5 20.1 242 133-393 1-246 (250)
361 KOG0587 Traf2- and Nck-interac 100.0 4.8E-38 1E-42 299.4 17.3 260 117-394 11-282 (953)
362 cd07829 STKc_CDK_like Catalyti 100.0 9.4E-38 2E-42 282.4 18.5 260 127-394 1-279 (282)
363 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-39 2.4E-44 321.4 6.2 253 124-394 1234-1494(1509)
364 KOG0604 MAP kinase-activated p 100.0 1.3E-38 2.9E-43 269.0 11.7 254 123-394 59-322 (400)
365 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-37 2.9E-42 289.1 19.3 256 125-394 15-297 (342)
366 KOG0690 Serine/threonine prote 100.0 3.2E-39 6.9E-44 275.8 7.7 243 124-386 167-411 (516)
367 cd07866 STKc_BUR1 Catalytic do 100.0 9.9E-38 2.1E-42 286.3 17.7 263 124-394 7-308 (311)
368 cd07877 STKc_p38alpha_MAPK14 C 100.0 2E-37 4.4E-42 288.1 18.9 265 117-394 9-300 (345)
369 cd07880 STKc_p38gamma_MAPK12 C 100.0 3E-37 6.6E-42 286.7 18.7 259 123-394 13-298 (343)
370 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.7E-37 6E-42 287.0 16.0 258 125-394 5-300 (342)
371 cd07851 STKc_p38 Catalytic dom 100.0 3E-37 6.5E-42 286.8 15.9 259 123-394 13-298 (343)
372 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-36 2.7E-41 303.8 21.0 148 125-279 4-152 (669)
373 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-36 3.3E-41 280.9 19.1 259 126-393 1-291 (332)
374 cd05576 STKc_RPK118_like Catal 100.0 4.4E-36 9.6E-41 264.4 18.9 224 136-393 4-233 (237)
375 KOG4236 Serine/threonine prote 100.0 1.3E-37 2.8E-42 281.1 9.2 247 130-394 569-819 (888)
376 KOG0666 Cyclin C-dependent kin 100.0 2.5E-37 5.5E-42 262.6 9.9 205 122-332 21-241 (438)
377 KOG0696 Serine/threonine prote 100.0 9.8E-38 2.1E-42 274.4 7.3 243 125-386 349-593 (683)
378 KOG1006 Mitogen-activated prot 100.0 7.5E-39 1.6E-43 266.4 -0.0 251 130-394 69-327 (361)
379 KOG0603 Ribosomal protein S6 k 100.0 1.3E-36 2.9E-41 281.8 13.4 240 124-394 321-563 (612)
380 KOG0662 Cyclin-dependent kinas 100.0 5.3E-36 1.2E-40 235.7 13.2 261 126-394 3-283 (292)
381 KOG0612 Rho-associated, coiled 100.0 5.3E-37 1.1E-41 299.0 7.6 257 119-393 69-337 (1317)
382 smart00220 S_TKc Serine/Threon 100.0 4.9E-35 1.1E-39 258.2 18.6 240 137-394 1-241 (244)
383 KOG0695 Serine/threonine prote 100.0 4.3E-36 9.3E-41 257.8 10.8 252 124-386 249-502 (593)
384 PLN03225 Serine/threonine-prot 100.0 3.2E-35 7E-40 286.7 18.3 261 123-394 130-450 (566)
385 KOG0671 LAMMER dual specificit 100.0 2.6E-36 5.6E-41 263.4 8.6 270 112-394 76-406 (415)
386 PLN03224 probable serine/threo 100.0 1.8E-34 4E-39 274.7 19.5 267 123-394 143-500 (507)
387 KOG1151 Tousled-like protein k 100.0 1.6E-35 3.5E-40 262.6 8.6 257 126-392 464-739 (775)
388 KOG0669 Cyclin T-dependent kin 100.0 5.1E-36 1.1E-40 247.7 3.2 262 125-394 17-315 (376)
389 KOG1027 Serine/threonine prote 100.0 4.3E-35 9.3E-40 278.1 9.1 245 127-394 511-767 (903)
390 KOG0614 cGMP-dependent protein 100.0 1.6E-35 3.4E-40 266.5 4.5 244 126-387 421-665 (732)
391 KOG0608 Warts/lats-like serine 100.0 2.6E-34 5.6E-39 264.8 12.3 213 117-336 618-876 (1034)
392 KOG0984 Mitogen-activated prot 100.0 2.5E-34 5.5E-39 231.0 8.9 205 121-332 42-253 (282)
393 cd00180 PKc Catalytic domain o 100.0 9.5E-32 2.1E-36 231.8 21.7 212 133-395 1-215 (215)
394 KOG1290 Serine/threonine prote 100.0 3.2E-32 7E-37 244.3 16.9 133 124-265 77-222 (590)
395 KOG0576 Mitogen-activated prot 100.0 1.4E-33 3E-38 261.6 4.7 253 124-393 14-270 (829)
396 KOG0668 Casein kinase II, alph 100.0 1.3E-32 2.8E-37 224.6 8.9 253 124-393 37-321 (338)
397 KOG0664 Nemo-like MAPK-related 100.0 3.9E-33 8.5E-38 233.3 2.8 258 129-395 57-344 (449)
398 KOG0665 Jun-N-terminal kinase 100.0 2.6E-31 5.6E-36 227.1 9.2 257 125-394 17-310 (369)
399 smart00221 STYKc Protein kinas 100.0 8.8E-30 1.9E-34 222.1 19.0 199 127-333 1-202 (225)
400 KOG1152 Signal transduction se 100.0 4.9E-31 1.1E-35 241.0 8.7 199 125-331 561-769 (772)
401 KOG0670 U4/U6-associated splic 100.0 1.9E-30 4.2E-35 234.5 8.0 201 121-332 428-636 (752)
402 KOG1345 Serine/threonine kinas 100.0 4.4E-30 9.5E-35 214.8 7.7 250 125-393 24-283 (378)
403 smart00750 KIND kinase non-cat 100.0 5.7E-29 1.2E-33 208.8 12.8 165 210-396 1-167 (176)
404 PLN00181 protein SPA1-RELATED; 100.0 1.1E-29 2.5E-34 259.8 8.5 195 181-394 28-265 (793)
405 KOG1167 Serine/threonine prote 100.0 1.3E-28 2.8E-33 218.2 9.9 200 118-332 29-279 (418)
406 KOG0195 Integrin-linked kinase 99.9 3.9E-27 8.4E-32 197.4 5.9 245 130-396 195-444 (448)
407 PRK09188 serine/threonine prot 99.9 1.6E-25 3.4E-30 204.9 15.6 168 122-305 15-194 (365)
408 KOG1164 Casein kinase (serine/ 99.9 1.3E-24 2.9E-29 199.4 18.5 254 126-395 19-294 (322)
409 COG0515 SPS1 Serine/threonine 99.9 6.8E-23 1.5E-27 189.2 21.5 260 127-393 2-274 (384)
410 KOG0590 Checkpoint kinase and 99.9 4.3E-25 9.3E-30 215.1 6.5 254 129-393 322-584 (601)
411 KOG1240 Protein kinase contain 99.9 4.7E-25 1E-29 215.6 6.1 246 126-394 24-291 (1431)
412 KOG1165 Casein kinase (serine/ 99.9 1.1E-22 2.5E-27 175.2 15.8 250 126-392 29-293 (449)
413 PRK10359 lipopolysaccharide co 99.9 1.8E-23 4E-28 178.0 9.9 174 124-326 30-217 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.9 8.6E-23 1.9E-27 172.1 14.0 143 130-281 2-167 (190)
415 KOG1163 Casein kinase (serine/ 99.9 2.8E-23 6.1E-28 171.3 10.4 255 124-395 14-281 (341)
416 KOG1023 Natriuretic peptide re 99.9 2.8E-23 6E-28 193.5 10.9 209 179-396 1-222 (484)
417 cd05145 RIO1_like RIO kinase f 99.9 5.6E-22 1.2E-26 167.9 15.0 144 130-282 2-168 (190)
418 PRK12274 serine/threonine prot 99.9 6.4E-22 1.4E-26 164.9 14.5 185 129-331 6-207 (218)
419 KOG0603 Ribosomal protein S6 k 99.9 3.1E-23 6.8E-28 193.2 3.4 227 132-388 1-232 (612)
420 PF14531 Kinase-like: Kinase-l 99.9 1.4E-21 3E-26 171.5 12.5 234 128-385 15-288 (288)
421 PRK10345 hypothetical protein; 99.8 3.7E-20 8E-25 157.5 14.2 138 127-279 4-158 (210)
422 KOG1166 Mitotic checkpoint ser 99.8 8.4E-20 1.8E-24 181.9 13.2 202 119-330 692-902 (974)
423 smart00090 RIO RIO-like kinase 99.8 1.7E-19 3.7E-24 157.2 13.4 147 125-282 28-199 (237)
424 PRK14879 serine/threonine prot 99.8 3.5E-19 7.7E-24 153.8 14.9 138 131-280 2-143 (211)
425 cd05144 RIO2_C RIO kinase fami 99.8 5.6E-19 1.2E-23 150.8 14.4 149 118-282 8-176 (198)
426 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.1E-20 4.6E-25 171.2 3.3 174 199-392 330-510 (516)
427 TIGR03724 arch_bud32 Kae1-asso 99.8 1.3E-18 2.7E-23 148.9 14.1 134 132-280 1-138 (199)
428 KOG4158 BRPK/PTEN-induced prot 99.8 5.8E-19 1.3E-23 156.0 12.1 195 183-395 274-511 (598)
429 PRK09605 bifunctional UGMP fam 99.8 1.6E-18 3.5E-23 169.7 15.0 142 124-281 332-477 (535)
430 KOG0606 Microtubule-associated 99.7 1.4E-18 3E-23 170.5 5.4 207 124-386 82-304 (1205)
431 cd05120 APH_ChoK_like Aminogly 99.7 5.4E-17 1.2E-21 132.3 12.9 134 130-280 3-138 (155)
432 cd05119 RIO RIO kinase family, 99.7 6.6E-17 1.4E-21 136.8 13.0 140 130-282 2-165 (187)
433 PRK01723 3-deoxy-D-manno-octul 99.7 1.6E-16 3.5E-21 138.9 12.8 140 130-281 36-192 (239)
434 KOG0590 Checkpoint kinase and 99.7 4.7E-18 1E-22 166.0 0.5 253 126-392 21-284 (601)
435 KOG1266 Protein kinase [Signal 99.6 4.2E-16 9E-21 134.9 7.3 201 177-394 119-331 (458)
436 TIGR01982 UbiB 2-polyprenylphe 99.6 9.2E-15 2E-19 138.7 12.1 146 130-283 122-309 (437)
437 PRK04750 ubiB putative ubiquin 99.5 2.9E-13 6.3E-18 130.0 12.2 147 125-282 120-315 (537)
438 KOG0601 Cyclin-dependent kinas 99.5 7.9E-14 1.7E-18 130.7 7.3 247 127-393 116-378 (524)
439 cd05151 ChoK Choline Kinase (C 99.5 5.8E-13 1.3E-17 110.7 10.7 130 131-280 4-136 (170)
440 KOG1243 Protein kinase [Genera 99.4 1.5E-12 3.3E-17 123.5 13.3 169 145-329 33-201 (690)
441 cd05146 RIO3_euk RIO kinase fa 99.4 4.1E-12 8.9E-17 106.2 13.9 139 131-281 3-174 (197)
442 COG3642 Mn2+-dependent serine/ 99.4 2.4E-11 5.2E-16 98.1 13.4 134 132-280 3-140 (204)
443 cd05154 ACAD10_11_like Acyl-Co 99.3 2.7E-11 5.9E-16 105.3 13.5 143 131-280 4-206 (223)
444 KOG3087 Serine/threonine prote 99.3 8.8E-11 1.9E-15 94.4 13.8 148 129-281 11-166 (229)
445 KOG0601 Cyclin-dependent kinas 99.3 2.7E-12 5.9E-17 120.5 4.8 248 122-395 262-515 (524)
446 KOG3741 Poly(A) ribonuclease s 99.2 5.1E-10 1.1E-14 103.5 15.9 215 138-394 289-521 (655)
447 COG4248 Uncharacterized protei 99.2 1.7E-09 3.7E-14 97.7 17.5 253 130-395 16-297 (637)
448 KOG0606 Microtubule-associated 99.2 6.5E-12 1.4E-16 124.4 1.6 251 123-389 802-1084(1205)
449 PRK15123 lipopolysaccharide co 99.1 3.5E-09 7.6E-14 93.7 15.5 139 137-280 34-194 (268)
450 PF01163 RIO1: RIO1 family; I 99.1 1.4E-09 3E-14 90.8 11.5 129 140-281 1-156 (188)
451 PRK09902 hypothetical protein; 99.0 1.8E-08 3.9E-13 84.5 15.0 142 133-280 26-179 (216)
452 COG0478 RIO-like serine/threon 98.9 1.2E-08 2.6E-13 87.7 11.5 137 128-279 94-250 (304)
453 PF06293 Kdo: Lipopolysacchari 98.9 2.7E-08 5.8E-13 85.2 12.3 128 148-281 31-171 (206)
454 KOG2137 Protein kinase [Signal 98.9 7.3E-10 1.6E-14 105.9 1.4 149 234-393 105-264 (700)
455 COG0661 AarF Predicted unusual 98.8 4.1E-08 8.8E-13 94.2 12.2 144 131-283 131-317 (517)
456 PF12260 PIP49_C: Protein-kina 98.6 2.7E-06 5.8E-11 71.4 15.5 104 174-281 8-112 (188)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 1.5E-06 3.2E-11 75.4 14.3 138 131-279 7-181 (226)
458 PF06176 WaaY: Lipopolysacchar 98.6 5.5E-07 1.2E-11 76.0 10.4 139 124-279 30-182 (229)
459 COG1718 RIO1 Serine/threonine 98.6 8.5E-07 1.8E-11 75.7 11.6 156 115-281 35-216 (268)
460 KOG0576 Mitogen-activated prot 98.5 1.1E-08 2.3E-13 97.2 -1.5 184 129-332 246-431 (829)
461 cd05150 APH Aminoglycoside 3'- 98.4 8.2E-06 1.8E-10 72.0 13.5 139 133-279 6-192 (244)
462 KOG1235 Predicted unusual prot 98.4 3.6E-06 7.8E-11 80.7 11.6 145 131-282 167-356 (538)
463 PF01636 APH: Phosphotransfera 98.3 9.5E-06 2.1E-10 70.9 12.8 142 131-279 3-196 (239)
464 PF10707 YrbL-PhoP_reg: PhoP r 98.3 2.9E-05 6.3E-10 65.4 15.0 138 129-279 5-171 (199)
465 COG2112 Predicted Ser/Thr prot 98.3 7.4E-06 1.6E-10 66.2 10.7 128 129-280 26-155 (201)
466 PLN02876 acyl-CoA dehydrogenas 98.3 2.6E-05 5.7E-10 80.7 15.9 149 130-281 43-258 (822)
467 PRK10593 hypothetical protein; 98.2 5.3E-05 1.1E-09 68.7 13.7 76 130-212 19-100 (297)
468 cd05155 APH_ChoK_like_1 Unchar 98.1 4E-05 8.8E-10 67.1 11.4 73 131-213 3-82 (235)
469 PLN03150 hypothetical protein; 98.1 6.7E-06 1.5E-10 82.2 7.2 48 1-49 489-538 (623)
470 PF13095 FTA2: Kinetochore Sim 98.1 5.5E-05 1.2E-09 63.3 11.4 129 125-278 37-206 (207)
471 cd05157 ETNK_euk Ethanolamine 98.0 9.5E-05 2E-09 64.8 12.4 141 131-280 4-201 (235)
472 KOG1035 eIF-2alpha kinase GCN2 98.0 4E-05 8.7E-10 78.4 10.5 195 172-394 229-434 (1351)
473 PRK09550 mtnK methylthioribose 97.9 0.00028 6.1E-09 66.1 13.9 80 130-211 31-117 (401)
474 TIGR02721 ycfN_thiK thiamine k 97.9 0.00017 3.8E-09 64.0 11.2 138 133-280 4-175 (256)
475 cd05153 HomoserineK_II Homoser 97.8 0.00023 4.9E-09 64.8 11.7 142 130-279 19-204 (296)
476 PRK05231 homoserine kinase; Pr 97.7 0.00087 1.9E-08 61.6 13.8 155 117-279 9-216 (319)
477 cd05156 ChoK_euk Choline Kinas 97.7 0.0004 8.8E-09 63.3 11.3 140 132-280 5-213 (302)
478 TIGR00938 thrB_alt homoserine 97.7 0.0016 3.5E-08 59.5 14.7 143 130-279 27-216 (307)
479 KOG2270 Serine/threonine prote 97.6 0.0008 1.7E-08 61.0 10.4 144 128-280 147-313 (520)
480 COG3173 Predicted aminoglycosi 97.5 0.0018 3.9E-08 58.6 12.5 146 133-282 33-230 (321)
481 KOG1826 Ras GTPase activating 97.5 2.1E-05 4.6E-10 82.3 -0.7 162 170-331 1274-1440(2724)
482 KOG2268 Serine/threonine prote 97.4 0.00033 7.3E-09 62.3 6.2 136 127-278 94-249 (465)
483 PF03881 Fructosamin_kin: Fruc 97.3 0.0022 4.8E-08 57.5 10.0 73 130-210 22-97 (288)
484 cd05152 MPH2' Macrolide 2'-Pho 97.3 0.0046 1E-07 55.4 12.0 31 250-280 185-216 (276)
485 PLN02756 S-methyl-5-thioribose 97.2 0.0097 2.1E-07 55.8 13.4 77 130-209 37-119 (418)
486 PLN02236 choline kinase 97.2 0.0082 1.8E-07 55.7 12.7 139 133-280 44-231 (344)
487 COG3001 Uncharacterized protei 97.1 0.01 2.2E-07 50.5 11.7 134 132-274 23-210 (286)
488 TIGR01767 MTRK 5-methylthiorib 97.1 0.0077 1.7E-07 55.4 11.4 76 132-209 2-84 (370)
489 TIGR02906 spore_CotS spore coa 96.9 0.019 4E-07 52.6 12.6 29 250-279 187-215 (313)
490 PF00560 LRR_1: Leucine Rich R 96.8 0.00032 6.8E-09 36.1 0.1 18 3-21 1-18 (22)
491 PRK12396 5-methylribose kinase 96.6 0.015 3.2E-07 54.2 9.6 78 130-209 34-117 (409)
492 PLN03150 hypothetical protein; 96.6 0.0048 1E-07 62.0 6.7 36 1-36 465-501 (623)
493 COG2334 Putative homoserine ki 96.5 0.046 9.9E-07 50.1 11.9 136 137-279 37-227 (331)
494 PLN02421 phosphotransferase, a 96.5 0.039 8.5E-07 50.9 11.4 139 133-280 22-213 (330)
495 PRK11768 serine/threonine prot 96.4 0.095 2.1E-06 48.3 13.7 72 136-212 36-114 (325)
496 PRK06148 hypothetical protein; 96.3 0.075 1.6E-06 56.6 13.7 141 132-280 32-236 (1013)
497 PF01633 Choline_kinase: Choli 96.2 0.014 3E-07 50.1 6.8 29 251-279 144-173 (211)
498 PTZ00384 choline kinase; Provi 96.2 0.039 8.5E-07 51.8 9.8 29 251-280 228-256 (383)
499 PF07387 Seadorna_VP7: Seadorn 95.8 0.08 1.7E-06 45.0 9.0 151 137-327 74-224 (308)
500 PF13504 LRR_7: Leucine rich r 95.7 0.0062 1.3E-07 29.0 1.3 14 2-15 1-14 (17)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-60 Score=433.77 Aligned_cols=280 Identities=41% Similarity=0.734 Sum_probs=237.5
Q ss_pred CCcccHHHHHHHhcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeE
Q 016009 112 EGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 191 (397)
...|+++++..||++|+..+.||+|+||.||+|.+++|+.||||++....... ..+|.+|++++.+++|||+|+++
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~----~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG----EREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc----hhHHHHHHHHHhcCCCcCcccEE
Confidence 44689999999999999999999999999999999999999999876532211 35699999999999999999999
Q ss_pred EEEecCC-eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcE
Q 016009 192 GFCSHAR-HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEA 270 (397)
Q Consensus 192 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 270 (397)
|||.+.+ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||..+.++|+||||||+|||||+++++
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 9999988 599999999999999999886644 79999999999999999999999998899999999999999999999
Q ss_pred EEeeeccccccCCCCCCcccc-cccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccc----c---ccc
Q 016009 271 HVADFGIAKFLKPDSSNWTEF-AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSIS----S---SFL 342 (397)
Q Consensus 271 kl~Dfg~~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~----~---~~~ 342 (397)
||+|||+++............ .||.+|+|||+...+..++|+||||||++|+|++||+.|.+...... . ...
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 999999997654312222222 89999999999999999999999999999999999998877433111 0 111
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+++|+.+........+....+.+++.+|++.+|++||+|.||+++|+
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 223368899999986322221267778999999999999999999999999884
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.6e-52 Score=436.16 Aligned_cols=367 Identities=27% Similarity=0.534 Sum_probs=258.4
Q ss_pred CCCCCEEecCCCcccccCCCCCccccCCcccccCCCCCCCCCC--CCCCCCCCCCCCCCCCCceeEEEehhhHHHHHHHH
Q 016009 1 MHGLSVIDISDNQLQGPVPNSTAFRNASVEALEGNKGLCGGVK--GMQPCKGFLSHKQNSGAKRFAIVFPVLGALLVSMT 78 (397)
Q Consensus 1 l~~L~~ldls~N~l~G~iP~~~~~~~~~~~~~~gN~~lcg~~~--~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (397)
+++|++||||+|+|+|.||+..+|.+++..++.||+.+||..+ ...+|... .+....+.++++++++++++++
T Consensus 570 l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-----~~~~~~~~~~~~~~~~~~~~~~ 644 (968)
T PLN00113 570 VESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-----RKTPSWWFYITCTLGAFLVLAL 644 (968)
T ss_pred CcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc-----cccceeeeehhHHHHHHHHHHH
Confidence 4678899999999999999888888888899999999999643 23455321 1112223333333333333333
Q ss_pred HHHhhhhhccCCCCCCccCCCCCCCCcceeecc----CCcccHHHHHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEE
Q 016009 79 LVAIFILRKRNSDSGDRQRSNQNPHGLFSILNF----EGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVA 153 (397)
Q Consensus 79 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~va 153 (397)
++++++++++++....++.... .+......+ ...+.++++. ..|...+.||+|+||.||+|.. .++..||
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~va 719 (968)
T PLN00113 645 VAFGFVFIRGRNNLELKRVENE--DGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFV 719 (968)
T ss_pred HHHHHHHHHhhhcccccccccc--cccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEE
Confidence 3333333332221111111111 110110001 1123344433 4577788999999999999976 5789999
Q ss_pred EEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHH
Q 016009 154 IKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNV 233 (397)
Q Consensus 154 vK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i 233 (397)
||++..... ....|++.+++++||||++++|+|.+.+..++||||+++|+|.++++ .++|.++.++
T Consensus 720 vK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i 785 (968)
T PLN00113 720 VKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKI 785 (968)
T ss_pred EEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHH
Confidence 999864211 11346889999999999999999999999999999999999999994 3899999999
Q ss_pred HHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccccccccccCcccccCCCCCcchh
Q 016009 234 IKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCD 313 (397)
Q Consensus 234 ~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~D 313 (397)
+.|+|+||+|||+.+.++++||||||+||+++.++.+++. ||........ ....++..|+|||++.+..++.++|
T Consensus 786 ~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sD 860 (968)
T PLN00113 786 AIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSD 860 (968)
T ss_pred HHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccc
Confidence 9999999999997766799999999999999999988875 6655432211 2236789999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCCcccccccc------ccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC
Q 016009 314 VYSFGVLALEVIKGKHPRDFLSSISSS------FLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT 387 (397)
Q Consensus 314 v~s~G~~l~el~tg~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt 387 (397)
||||||++|||+||+.|++........ ..........++|+.+........+...++.+++.+||+.||++|||
T Consensus 861 v~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt 940 (968)
T PLN00113 861 IYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPC 940 (968)
T ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcC
Confidence 999999999999999998543221100 00111223344555554333333456678899999999999999999
Q ss_pred HHHHHHHhc
Q 016009 388 MKIVSQQLQ 396 (397)
Q Consensus 388 ~~~vl~~Le 396 (397)
|+||+++|+
T Consensus 941 ~~evl~~L~ 949 (968)
T PLN00113 941 ANDVLKTLE 949 (968)
T ss_pred HHHHHHHHH
Confidence 999999986
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4e-53 Score=386.22 Aligned_cols=253 Identities=31% Similarity=0.543 Sum_probs=208.1
Q ss_pred CCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC-eeeEEEEe
Q 016009 128 DAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR-HSFLVYEF 206 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 206 (397)
...+.+|+|+||+||+|.+.....||||++......... .++|.+|+.+|.+++|||||+++|+|.+.. ..++||||
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~--~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES--RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH--HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 334559999999999999965555999999864433322 679999999999999999999999998887 79999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-ceeccCCCCcEEeCCCC-cEEEeeeccccccCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPP-IVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPD 284 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~ 284 (397)
|++|+|.++++.. ....+++..+++++.+||+||.|||++ + ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999874 235799999999999999999999998 7 99999999999999998 9999999999876543
Q ss_pred CCCcccccccccccCccccc--CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 285 SSNWTEFAGTYGYVAPELAY--TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
....+...||+.|||||++. ...|+.|+||||||+++|||+||+.||............ ......+.+ +.
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v----~~~~~Rp~~--p~-- 269 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV----VVGGLRPPI--PK-- 269 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH----HhcCCCCCC--Cc--
Confidence 33334478999999999999 568999999999999999999999999866542211111 011111111 11
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
++...+..++.+||+.||+.||++.+++..|+
T Consensus 270 --~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 270 --ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred --cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 24456888999999999999999999999886
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-53 Score=371.03 Aligned_cols=254 Identities=28% Similarity=0.426 Sum_probs=211.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC-eeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR-HSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv 203 (397)
+.+..+.||+|..|+|||+.++ +++.+|+|++.... +....+++.+|++++++.+||+||.++|.|.... ...++
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~---~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI---DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC---CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence 3444678999999999999765 78899999985422 2345789999999999999999999999999888 59999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||||++|||++.+... +.+++...-+|+.+|++||.|||+. .+||||||||+|||++..|++||+|||.+..+..
T Consensus 157 mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN 231 (364)
T ss_pred hhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence 9999999999999765 3599999999999999999999973 2999999999999999999999999999987765
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
. ...+.+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+..... .+...-+-+..+++...+..+..
T Consensus 232 S--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~---~~~~~~~Ll~~Iv~~ppP~lP~~- 305 (364)
T KOG0581|consen 232 S--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP---PYLDIFELLCAIVDEPPPRLPEG- 305 (364)
T ss_pred h--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC---CCCCHHHHHHHHhcCCCCCCCcc-
Confidence 4 44567999999999999999999999999999999999999999865411 11111223455555433322221
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.++.++.+++..||++||.+|||++|++++
T Consensus 306 -~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 306 -EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 466779999999999999999999999864
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-52 Score=382.19 Aligned_cols=251 Identities=25% Similarity=0.456 Sum_probs=214.7
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
..|...+.||+|+|+.+|.++. .+|+.||+|++.+..- ......+.+.+|+++.++|+|||||+++++|++.+..|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l-~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL-KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh-cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 4688899999999999999976 8999999999875322 2234567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
.|+|.+++|..++..+ +++++.+++.++.||+.||.|||+. +|+|||||..|+|+++++++||+|||+|..+..
T Consensus 97 LELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999999743 4699999999999999999999999 999999999999999999999999999999998
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
+.....+.+||+.|+|||++.....+..+||||+||+||-|++|++||+...- .+....+.......|.
T Consensus 171 ~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v--------kety~~Ik~~~Y~~P~--- 239 (592)
T KOG0575|consen 171 DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV--------KETYNKIKLNEYSMPS--- 239 (592)
T ss_pred cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH--------HHHHHHHHhcCccccc---
Confidence 87777889999999999999999999999999999999999999999973211 1111222222222221
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+||.++|++||.+|||+++|+..
T Consensus 240 -~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 240 -HLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -ccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 233457789999999999999999999863
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-51 Score=374.82 Aligned_cols=249 Identities=29% Similarity=0.525 Sum_probs=208.0
Q ss_pred CCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
.+...+.||+|.||.||.|.+.....||+|.++.. ....++|.+|+++|++|+|+|||+++|+|..+..++||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-----~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE 281 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-----SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE 281 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-----ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence 34456779999999999999988889999998753 1235789999999999999999999999999889999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
||+.|+|.++|.... +..+...+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+|||+++....+.
T Consensus 282 ~m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~ 357 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE 357 (468)
T ss_pred ecccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCc
Confidence 999999999998733 35689999999999999999999999 99999999999999999999999999999544333
Q ss_pred CCc-ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc--CCCCCCCCc
Q 016009 286 SNW-TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEML--DPRLPAPSR 361 (397)
Q Consensus 286 ~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 361 (397)
... ....-+..|.|||.+..+.++.|||||||||+||||+| |+.|+..+.... +-+.+ ..+++.|..
T Consensus 358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e---------v~~~le~GyRlp~P~~ 428 (468)
T KOG0197|consen 358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE---------VLELLERGYRLPRPEG 428 (468)
T ss_pred eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH---------HHHHHhccCcCCCCCC
Confidence 222 22233668999999999999999999999999999999 999987554321 11112 234555544
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
++..+.+++..||..+|++|||++.+...|+
T Consensus 429 ----CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 429 ----CPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred ----CCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 4456999999999999999999999888775
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-51 Score=360.28 Aligned_cols=256 Identities=25% Similarity=0.382 Sum_probs=210.7
Q ss_pred cCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcc---hhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQ---IVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
+.|...+.||+|+||.|-+| ..++|+.||||.++....... ........+|+++|++|+|||||++.+++..++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 45677889999999999999 556899999999976333221 11233457999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC---CcEEEeeecc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE---FEAHVADFGI 277 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~ 277 (397)
|+||||++||+|.+.+-.++. +.+..-..++.|++.|+.|||++ ||+||||||+|||+..+ -.+||+|||+
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred EEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccch
Confidence 999999999999999977654 66677788999999999999999 99999999999999766 6799999999
Q ss_pred ccccCCCCCCcccccccccccCcccccCCCC---CcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKI---TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~---~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
|+... ......+.+||+.|.|||++.+..+ ..+.|+||+||+||-+++|.+||.....-. .-.+.+...
T Consensus 326 AK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-------sl~eQI~~G 397 (475)
T KOG0615|consen 326 AKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-------SLKEQILKG 397 (475)
T ss_pred hhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-------cHHHHHhcC
Confidence 99876 4556677899999999999986653 347899999999999999999987432211 112333444
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+....+..+.....+..++|.++|..||++|||+.|++++
T Consensus 398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 4444455666777889999999999999999999999874
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-52 Score=346.46 Aligned_cols=259 Identities=23% Similarity=0.332 Sum_probs=211.2
Q ss_pred cCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEE-EEecCCe-ee
Q 016009 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG-FCSHARH-SF 201 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~ 201 (397)
.+|.+.++||+|.||+||++ ...+|..+|.|.++- ..-+...+++...|+.+|++|+|||||++++ .+..+++ ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f--~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF--GMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch--hhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 35677889999999999999 567999999999873 3344456788999999999999999999999 4445555 89
Q ss_pred EEEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 202 LVYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFP-PIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
||||||.+|+|..++...+ ..+.++++.+|+++.|++.||..+|+.... .|.||||||.||+++.+|.+||+|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 9999999999999986543 335689999999999999999999994332 38999999999999999999999999999
Q ss_pred ccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 280 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 280 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
++.......+..+|||.||+||.+.+.+|+.||||||+||++|||+.-++||..... ......+. ....++.
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~-----~~L~~KI~---qgd~~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL-----LSLCKKIE---QGDYPPL 248 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH-----HHHHHHHH---cCCCCCC
Confidence 998777767788999999999999999999999999999999999999999864321 11111111 2222211
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
+ ...++..+..||..|+..||+.||+.-.++..+
T Consensus 249 p--~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 249 P--DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred c--HHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 1 145677899999999999999999865555443
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-50 Score=351.03 Aligned_cols=202 Identities=30% Similarity=0.498 Sum_probs=179.8
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
..+|...+.||+|.|++||+|++. ++..||||.+....- .....+.+..|+.+|+.++|||||+++++++.++..||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 357888888999999999999764 689999999875321 22345678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC------CcEEEeeec
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE------FEAHVADFG 276 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg 276 (397)
|||||.||+|.++++..+ .+++.....++.|+|.||++||++ +||||||||+||||+.. -.+||+|||
T Consensus 87 VMEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999999998765 599999999999999999999999 99999999999999765 458999999
Q ss_pred cccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 016009 277 IAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFL 334 (397)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~ 334 (397)
+|+.+... ....+.+|++-|||||++..++|+.|+|+||+|+++|++++|+.||+..
T Consensus 161 fAR~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 161 FARFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hhhhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99988743 3446689999999999999999999999999999999999999999843
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-50 Score=347.77 Aligned_cols=245 Identities=26% Similarity=0.394 Sum_probs=204.7
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+..++||+|+||+||.++. ++++.+|+|++++..-.. ..+.+....|..+|.+++||.||+++-.|++++.+||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~-~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE-KKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhh-hhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 45799999999999999999954 578999999997633222 2346778899999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|+||+.||.|..+|+..+ .+++..+.-++.+|+.||.|||+. +||||||||+|||||++|+++|+|||+++...
T Consensus 103 Vld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999997654 489999999999999999999999 99999999999999999999999999999765
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.......+.+||+.|||||++.+..|+..+|+||+|+++|||++|.+||...... ...+.+.....+.++..
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~--------~~~~~I~~~k~~~~p~~ 248 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK--------KMYDKILKGKLPLPPGY 248 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH--------HHHHHHhcCcCCCCCcc
Confidence 5555556689999999999999999999999999999999999999998643321 11222222222222221
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRP 386 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RP 386 (397)
...+..+++...+..||++|.
T Consensus 249 ---ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 249 ---LSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---CCHHHHHHHHHHhccCHHHhc
Confidence 223477888899999999995
No 11
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-49 Score=378.07 Aligned_cols=255 Identities=27% Similarity=0.471 Sum_probs=209.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
.+....+.||+|.||+||+|+.. +.+.||||.++..... ...++|.+|++++..++|||||+++|.|..++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~---~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN---QARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH---HHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 34445677999999999999643 3567999999864332 24789999999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccc-------cC----CCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAA-------AQ----ELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE 267 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~-------~~----~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 267 (397)
..++|+|||..|+|.++|..... +. +|+..+.+.||.|||.||.||-++ .+|||||.++|+|+.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 99999999999999999975431 12 388999999999999999999999 89999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccc
Q 016009 268 FEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNT 344 (397)
Q Consensus 268 ~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~ 344 (397)
..+||+|||+++.....+... ....-..+|||||.+..++||++||||||||+|||+++ |+.||.....
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-------- 711 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-------- 711 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------
Confidence 999999999998655443322 13345779999999999999999999999999999998 9999764433
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 345 DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
++.+..+-+..+- ..++.++.++.+|+..||+.+|++||++.||-..|+
T Consensus 712 ~EVIe~i~~g~lL---~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 712 QEVIECIRAGQLL---SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHHHHcCCcc---cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 2223333333332 222456677999999999999999999999998885
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.6e-48 Score=327.45 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=208.1
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+.|+...++|+|+||+||+++.+ +|+.||||++... .++..-++-.++|+++|++++|+|+|.++.+|..+..++||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es--edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES--EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC--CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 35777888999999999999765 6999999999752 23344467789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+|||+..-|.++- ... ..++.+.+.+++.|+++|+.|+|++ +++||||||+|||++.++.+||+|||+|+.+..
T Consensus 80 FE~~dhTvL~eLe-~~p--~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 80 FEYCDHTVLHELE-RYP--NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred eeecchHHHHHHH-hcc--CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 9999886665543 332 2478899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc----------------ccccc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF----------------LNTDI 346 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~----------------~~~~~ 346 (397)
.....+..+.|-.|.|||.+.+ .+|....|||++||++.||++|.+-|...+.+..-+ .....
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 6677788889999999999887 789999999999999999999998876544432111 11111
Q ss_pred ccccccCCCCCCCCc---chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 347 ELDEMLDPRLPAPSR---SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 347 ~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
....+.-|....+.. ..+.....+.+++..|++.||++|++-+|++.
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 122222222211111 11122346889999999999999999999875
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-49 Score=367.89 Aligned_cols=263 Identities=25% Similarity=0.522 Sum_probs=220.8
Q ss_pred cccHHHHHHHhcCC---------CCCccccccCcEEEEEEEeC----CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHH
Q 016009 114 KLVYDEIVRATNDF---------DAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALT 180 (397)
Q Consensus 114 ~~~~~~~~~~~~~~---------~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~ 180 (397)
.++|+|--.|..+| .+.++||.|.||.||+|+++ ....||||.++.....+ .+.+|+.|+.||.
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek---qrrdFL~EAsIMG 685 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK---QRRDFLSEASIMG 685 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHH---HHhhhhhhhhhcc
Confidence 56676665555554 46678999999999999765 23579999998755443 3688999999999
Q ss_pred hccCCceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCC
Q 016009 181 EIRHRNIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSK 260 (397)
Q Consensus 181 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 260 (397)
+.+||||++|.|+.......++|.|||+||+|+.+|+.+.+ ++++.|+..++++||.||.||.+. ++|||||.++
T Consensus 686 QFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAAR 760 (996)
T KOG0196|consen 686 QFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAAR 760 (996)
T ss_pred cCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhh
Confidence 99999999999999999999999999999999999988764 599999999999999999999998 9999999999
Q ss_pred cEEeCCCCcEEEeeeccccccCCCCC-Ccccccc--cccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccc
Q 016009 261 NLLLDLEFEAHVADFGIAKFLKPDSS-NWTEFAG--TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSS 336 (397)
Q Consensus 261 Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~g--~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~ 336 (397)
|||++.+..+|++|||++++++.+.. ..+...| ..+|.|||.+...++|.+|||||||++|||.++ |.+||.++..
T Consensus 761 NILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN 840 (996)
T KOG0196|consen 761 NILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 840 (996)
T ss_pred heeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch
Confidence 99999999999999999998876553 2333334 468999999999999999999999999999887 9999876654
Q ss_pred cccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 337 ISSSFLNTDIELDEML-DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 337 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.. .+..+. +-+++.|. +++..|.+|+..||++|-.+||++.+|+..|+
T Consensus 841 Qd--------VIkaIe~gyRLPpPm----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 841 QD--------VIKAIEQGYRLPPPM----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred HH--------HHHHHHhccCCCCCC----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 22 122221 23455443 55667999999999999999999999999885
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-47 Score=351.04 Aligned_cols=263 Identities=23% Similarity=0.394 Sum_probs=213.3
Q ss_pred HHHHHHHhcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec
Q 016009 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH 196 (397)
Q Consensus 117 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 196 (397)
.++++...+++.....||+|.||+||+|.+.. .||||++....... ...+.|.+|+.++++-+|.||+-+.|||.+
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~--~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTP--EQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCH--HHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 45666666677788899999999999999853 49999998654433 357899999999999999999999999988
Q ss_pred CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeec
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 276 (397)
+.. ++|..+|+|-+|..+++..+ ..++..+.+.|+.|||+||.|||.+ +|||+|||+.||++.++++|||+|||
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred Cce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEeccc
Confidence 877 99999999999999998765 4688899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCC--CCCcccccccccccCcccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 016009 277 IAKFLKPD--SSNWTEFAGTYGYVAPELAYTM---KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 277 ~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
++..-..- ........|...|||||+++.. +|+..+||||||+++|||+||..||.....-..-+..+.+.
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~---- 609 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGY---- 609 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccc----
Confidence 99754332 2233455788899999998854 58999999999999999999999987322211111111110
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+........+.+++.+|+..||..++++||.+.+|+.+|+
T Consensus 610 ---l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 610 ---LMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred ---cCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 112222233456678999999999999999999999999765
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-47 Score=350.15 Aligned_cols=250 Identities=25% Similarity=0.444 Sum_probs=213.3
Q ss_pred cCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
..|.....||+|..|.||.+ +..+++.||||++... ....++-+.+|+.+|+..+|+|||++++.|..++++|+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~----~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR----KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEec----cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 45677788999999999999 5568899999998752 223467789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||||+||+|.+.+... .+++.++..|+.++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+..
T Consensus 349 MEym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EeecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 9999999999998654 389999999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
........+||+.|||||+.....|.+|.||||||++++||+-|.+||=...++..-++.. ..-.|.+..+
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa-----~ng~P~lk~~---- 492 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-----TNGTPKLKNP---- 492 (550)
T ss_pred ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh-----hcCCCCcCCc----
Confidence 7777788899999999999999999999999999999999999999975444433322221 1112222222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.||++||++.|+|++
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 2344568999999999999999999999974
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=333.88 Aligned_cols=262 Identities=27% Similarity=0.407 Sum_probs=211.5
Q ss_pred hcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+...+||.|..++||+|. .+.++.||||++...... .+.+.+.+|+..++.++||||++++..|..+..+|+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~---~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN---NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh---hhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 4578889999999999999994 567899999998753222 236889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||.||.+||+.+.+...-. ..+++..+..|++++++||.|||++ |.||||+|+.|||++++|.+||+|||.+..+.
T Consensus 102 VmpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred eehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 9999999999999976543 3489999999999999999999999 99999999999999999999999999887655
Q ss_pred CCCCCc----ccccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 016009 283 PDSSNW----TEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRL 356 (397)
Q Consensus 283 ~~~~~~----~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (397)
...... ...+||+.|||||++.. ..|+.|+||||||++..||.+|..||..+.++..-....+....... ..
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~--t~ 255 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL--TS 255 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc--cc
Confidence 433221 45689999999999653 35999999999999999999999999877765422221111111000 00
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+.+.......++.+++..|+++||++|||++++++.
T Consensus 256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 11122223445689999999999999999999999863
No 17
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-47 Score=345.17 Aligned_cols=240 Identities=30% Similarity=0.510 Sum_probs=202.6
Q ss_pred CCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
..+-||+|+-|.||+|++. ++.||||+++. .-..+++.|++|+||||+.+.|+|......+||||||.
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~e-----------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRE-----------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhh-----------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccc
Confidence 3567999999999999994 57899999753 12367899999999999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
.|-|...|.... .++......|..+||.||.|||.+ .|||||||+-||||+.+..+||+|||-++..... ...
T Consensus 196 ~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STk 268 (904)
T KOG4721|consen 196 QGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STK 268 (904)
T ss_pred cccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhh
Confidence 999999997654 588889999999999999999999 9999999999999999999999999999876543 445
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
..++||..|||||+++..+.++|+||||||||||||+||..||.+......-+-.....+ .++.|. .++.
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL------~LpvPs----tcP~ 338 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSL------HLPVPS----TCPD 338 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcc------cccCcc----cCch
Confidence 568999999999999999999999999999999999999999876554332222221111 122222 3445
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 016009 369 SIVEVVFSCLNESPESRPTMKIVSQQLQI 397 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~~vl~~Le~ 397 (397)
.+.-|+++||+..|..||++++++.+|+|
T Consensus 339 GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 339 GFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 57778899999999999999999999986
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-46 Score=332.74 Aligned_cols=252 Identities=27% Similarity=0.419 Sum_probs=199.4
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC--eee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR--HSF 201 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~ 201 (397)
.+|...+.||+|+||.||++... +|...|||.+..... ...+.+.+|+.+|++++|||||+++|...... ..+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~----~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS----PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc----hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 35667788999999999999665 599999999875311 11677899999999999999999999854444 689
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC-CCcEEEeeeccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKF 280 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 280 (397)
+.|||+++|+|.+++...+. .+++..+..++.||++||+|||++ +++||||||+|||++. ++.+||+|||++..
T Consensus 93 i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 99999999999999987664 599999999999999999999998 9999999999999999 79999999999987
Q ss_pred cCCC---CCCcccccccccccCcccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCcc-ccccccccccccccccccCCC
Q 016009 281 LKPD---SSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFL-SSISSSFLNTDIELDEMLDPR 355 (397)
Q Consensus 281 ~~~~---~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 355 (397)
.... ........||+.|||||++..+. ...++||||+||++.||+||+.||... ..... .........
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~-------~~~ig~~~~ 240 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEA-------LLLIGREDS 240 (313)
T ss_pred cccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHH-------HHHHhccCC
Confidence 6631 12234578999999999999643 345999999999999999999998752 11110 011111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
.+.-+ ...+....+++.+|++.||++|||+++++++-
T Consensus 241 ~P~ip---~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 241 LPEIP---DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred CCCCC---cccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 11111 12334578889999999999999999999763
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-46 Score=339.23 Aligned_cols=254 Identities=26% Similarity=0.381 Sum_probs=209.0
Q ss_pred HHhcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCe
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARH 199 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 199 (397)
+..++|.+.+.||.|+|++|++|+ ..+++.+|||++.+..-.. ....+.+..|-++|.+| .||.|++|+..|++...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iik-e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIK-EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHh-hcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 334688899999999999999995 5579999999986532211 12234567788999999 89999999999999999
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
+|+|+||+++|+|.+++...+ .+++...+.++.+|+.||+|||+. |||||||||+|||||+||+++|+|||.++
T Consensus 149 LYFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 999999999999999998764 599999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCC-----------c--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 016009 280 FLKPDSSN-----------W--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDI 346 (397)
Q Consensus 280 ~~~~~~~~-----------~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~ 346 (397)
.+.+.... . ...+||..|.+||++.....+..+|+|+|||++|+|+.|++||......-
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl-------- 294 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL-------- 294 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH--------
Confidence 87542111 1 44789999999999999999999999999999999999999997654421
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+++-....+... +..+.+|+.+.|..||.+|+|.++|-++
T Consensus 295 iFqkI~~l~y~fp~~f----p~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 295 IFQKIQALDYEFPEGF----PEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHHHHhcccCCCCC----CHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1223332222222222 2457889999999999999999998764
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=340.11 Aligned_cols=254 Identities=23% Similarity=0.350 Sum_probs=207.9
Q ss_pred HhcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcc-hhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCe
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQ-IVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARH 199 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 199 (397)
..+.|...+.||+|+||+|+.|. ..++..||+|.+........ ....+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 34578889999999999999995 45789999997665311111 123456678999999998 9999999999999999
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-CcEEEeeeccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGIA 278 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 278 (397)
.++||||+.||+|.+++... .++.+.....++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999873 3588899999999999999999999 99999999999999999 99999999999
Q ss_pred cccCCCCCCcccccccccccCcccccCCC-CC-cchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCC
Q 016009 279 KFLKPDSSNWTEFAGTYGYVAPELAYTMK-IT-EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRL 356 (397)
Q Consensus 279 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (397)
...........+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++..... ....+.....
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~--------l~~ki~~~~~ 240 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN--------LYRKIRKGEF 240 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH--------HHHHHhcCCc
Confidence 98753445567789999999999999877 76 78999999999999999999998633211 0111222222
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
..+.... ..++.+++.+|++.||.+|+|+.+|++
T Consensus 241 ~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 241 KIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred cCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 2222211 456889999999999999999999984
No 21
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=6.3e-46 Score=344.67 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=200.9
Q ss_pred HhcCCCCCccccccCcEEEEEEEe------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEe
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCS 195 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 195 (397)
+.++|.+.+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.+++++ +||||++++++|.
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT---ASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc---hHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 456788899999999999999963 2356899999864322 22346789999999999 8999999999887
Q ss_pred cC-CeeeEEEEeccCCCHHHhhccccc-----------------------------------------------------
Q 016009 196 HA-RHSFLVYEFLKRGSLAAILSSDAA----------------------------------------------------- 221 (397)
Q Consensus 196 ~~-~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 221 (397)
.. ...++||||+++|+|.+++.....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 64 457899999999999999864321
Q ss_pred ------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC--cccccc
Q 016009 222 ------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAG 293 (397)
Q Consensus 222 ------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g 293 (397)
..++++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++........ .....+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 13478899999999999999999998 9999999999999999999999999999865432221 122345
Q ss_pred cccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-CCCCCcchHHHHHHHH
Q 016009 294 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPR-LPAPSRSVQEKLRSIV 371 (397)
Q Consensus 294 ~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 371 (397)
+..|+|||++.+..++.++||||||+++|||++ |..||....... .....+.+.. ...+ ......+.
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~l~ 307 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-------EFCQRLKDGTRMRAP----ENATPEIY 307 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-------HHHHHHhcCCCCCCC----CCCCHHHH
Confidence 678999999998899999999999999999997 999986432110 0001111111 1111 12234588
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 372 EVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 372 ~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+++.+||+.||++|||+.|+++.|+
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHH
Confidence 9999999999999999999999986
No 22
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-47 Score=334.16 Aligned_cols=250 Identities=29% Similarity=0.439 Sum_probs=213.8
Q ss_pred cCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
..|+..+.||+|.||.||+|. ..+++.||+|++....... ..+++.+|+.+|.+++++||.+++|.+..+..++++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d---eIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED---EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcch---hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 356777889999999999994 5678999999997644333 357788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||||.||++.+.+.... .+.+....-++.++..|+.|||.+ +.+|||||+.||++..+|.+||+|||++.++..
T Consensus 90 Mey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 99999999999997654 347778888999999999999999 999999999999999999999999999998877
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
......+.+||+.|||||++....|+.|+||||||++.+||++|.+|+....++..-+.. .+..+ +...
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI---------pk~~P--P~L~ 232 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI---------PKSAP--PRLD 232 (467)
T ss_pred hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec---------cCCCC--Cccc
Confidence 666667889999999999999889999999999999999999999998877664433322 11111 1122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+...+.+++..|+++||+.|||+.+++++
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 2566779999999999999999999999875
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.9e-45 Score=305.67 Aligned_cols=262 Identities=24% Similarity=0.350 Sum_probs=207.3
Q ss_pred cCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.+|...+.+|+|.||.||+| ..++|+.||||+++.....+. -.....+|++.|+.++|+||+.++++|...+...||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG--i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG--INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC--ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEE
Confidence 35777889999999999999 566899999999986422221 245678999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+|||+. +|+..++... ..++..++..++.++.+|++|||.+ .|+||||||.|+|++++|.+||+|||+++.+.+
T Consensus 80 fEfm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred EEeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 999975 9999997655 4688999999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccc----------ccccccccccccc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISS----------SFLNTDIELDEML 352 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~----------~~~~~~~~~~~~~ 352 (397)
.....+..+-|-.|.|||.+.|. .|+...|+||.||++.||+-|.+-|...+.+.+ ........+..+-
T Consensus 154 p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 154 PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence 77666666889999999988865 599999999999999999999876654333210 0000000011110
Q ss_pred C---C-CCCCC--CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 D---P-RLPAP--SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 ~---~-~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
| - ..+.+ ............+|+..++..||.+|+|++|++++
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0 0 01100 11222334557899999999999999999999875
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-46 Score=333.32 Aligned_cols=264 Identities=26% Similarity=0.403 Sum_probs=206.6
Q ss_pred HHhcCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--C
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--R 198 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~ 198 (397)
+-.+.|+.++.||+|+||.||+| +..+|+.||+|+++..... ........+|+.+|++|+||||+++.+..... .
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~--~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK--EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG 191 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC--CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence 33456778889999999999999 5678999999999863322 23356678999999999999999999998766 6
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
.+|||+|||+. +|.-++.... -.++..++..++.|++.||+|+|++ +|.|||||.+|||||.+|.+||+|||+|
T Consensus 192 siYlVFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred eEEEEEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccce
Confidence 89999999987 8888886543 3699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccc--------------cccc
Q 016009 279 KFLKPDSS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSIS--------------SSFL 342 (397)
Q Consensus 279 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~--------------~~~~ 342 (397)
+++..... ..+..+-|..|.|||.+.|. .|+.+.|+||.||+|.||++|++.+.....+. ..|.
T Consensus 266 r~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 266 RFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred eeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence 98876554 36778889999999988865 69999999999999999999999876433321 0111
Q ss_pred ccccccccccCCCCCCCC---cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 343 NTDIELDEMLDPRLPAPS---RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
...-.....+.+..+-.. +.........++|+..+|..||.+|.|+.++++
T Consensus 346 ~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 346 VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 000000111111111000 011122356788999999999999999999875
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4e-46 Score=338.58 Aligned_cols=249 Identities=28% Similarity=0.386 Sum_probs=209.4
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|.||.||||+. .+.+.||+|.+.+... ...+.+.+.+|++++++++||||+.++++|++..+.++|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 4677778899999999999954 4788999999876433 233467799999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
.||+.| +|..++...+ .++++++..++.+++.||.|||+. +|.|||+||.|||++.++++|++|||+++.+..
T Consensus 80 te~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred ehhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 999987 9999998765 499999999999999999999999 999999999999999999999999999998887
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.....+...||+.|||||...+..|+..+|.||+||++||+.+|++||-..+- .. -...+.......+
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si-----~~---Lv~~I~~d~v~~p---- 220 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI-----TQ---LVKSILKDPVKPP---- 220 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH-----HH---HHHHHhcCCCCCc----
Confidence 66666778999999999999999999999999999999999999999742111 00 0111111111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+..++...+.+||.+|.|-.+++.+
T Consensus 221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 221 STASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred ccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 2445568889999999999999998888753
No 26
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-44 Score=326.37 Aligned_cols=245 Identities=22% Similarity=0.335 Sum_probs=196.6
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec----CCeeeEEEE
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH----ARHSFLVYE 205 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e 205 (397)
...+|+|++|.||+|.. +|+.||||++..... ......+.+.+|++++++++||||++++|++.+ ....++|||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 35699999999999988 688999999875322 221224678899999999999999999999866 346789999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++|+|.+++.... .+++.....++.+++.||.|||+.. +++||||||+||++++++.+||+|||++.......
T Consensus 103 y~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 103 YCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred eCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 999999999997643 5899999999999999999999742 77899999999999999999999999988654322
Q ss_pred CCcccccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccccc--CCCCCCCCc
Q 016009 286 SNWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML--DPRLPAPSR 361 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 361 (397)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....+. ..+.+.+.
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~- 245 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--------IYDLIINKNNSLKLPL- 245 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhcCCCCCCCC-
Confidence 23467889999999876 679999999999999999999999987543211 011111 11111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+++.+||+.||++|||++++++.|+
T Consensus 246 ---~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 246 ---DCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred ---cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 23446889999999999999999999999886
No 27
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.6e-45 Score=328.60 Aligned_cols=254 Identities=21% Similarity=0.255 Sum_probs=199.8
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|+||.||++.. .+|+.||+|.+...... .......+.+|++++++++|+|++++.+++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 66678899999999999965 57999999998642211 11223567899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999988754332 3589999999999999999999998 99999999999999999999999999998654322
Q ss_pred CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 286 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ .......+....... ...
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~----~~~ 227 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRVKEDQEEY----SEK 227 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHhhcccccC----Ccc
Confidence 22345789999999999999999999999999999999999999874322100 000000111111111 112
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 016009 366 KLRSIVEVVFSCLNESPESRPT-----MKIVSQQ 394 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt-----~~~vl~~ 394 (397)
....+.+|+.+||+.||++||+ +++++++
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 3345889999999999999997 7888764
No 28
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.5e-44 Score=329.00 Aligned_cols=261 Identities=23% Similarity=0.351 Sum_probs=198.8
Q ss_pred cCCCCCccccccCcEEEEEEEeCC-----------------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCce
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS-----------------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 187 (397)
++|...+.||+|+||.||++...+ +..||+|.+..... .....++.+|++++++++||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN---KNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC---HHHHHHHHHHHHHHhhcCCCCe
Confidence 467888999999999999996532 33699999875322 2235679999999999999999
Q ss_pred eeeEEEEecCCeeeEEEEeccCCCHHHhhcccc----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 016009 188 VKLYGFCSHARHSFLVYEFLKRGSLAAILSSDA----------------AAQELGWSQRMNVIKGVADALSYLHHDCFPP 251 (397)
Q Consensus 188 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 251 (397)
+++++++...+..++||||+++|+|.+++.... ....++|.+++.++.|++.||+|||+. +
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ 158 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---N 158 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---C
Confidence 999999999999999999999999999885432 112478899999999999999999998 9
Q ss_pred ceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh--C
Q 016009 252 IVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK--G 327 (397)
Q Consensus 252 ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t--g 327 (397)
++||||||+||++++++.+||+|||++......... .....++..|+|||++.++.++.++||||||+++|||++ +
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 999999999999999999999999999765433211 122345778999999988899999999999999999987 5
Q ss_pred CCCCCccccccccccccccccccc-cCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 328 KHPRDFLSSISSSFLNTDIELDEM-LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 328 ~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..||............ ....... .......+ ...+..+.+++.+||+.||++|||+++|.+.|+
T Consensus 239 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 239 EQPYGELTDEQVIENA-GEFFRDQGRQVYLFRP----PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCcCCHHHHHHHH-HHHhhhccccccccCC----CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 5666533221100000 0000000 00000011 122345889999999999999999999999886
No 29
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=329.62 Aligned_cols=260 Identities=24% Similarity=0.370 Sum_probs=206.7
Q ss_pred hcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCC-ee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHAR-HS 200 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~ 200 (397)
.++|...+.||.|+||.||+|+ ..+|..||||+++......+ .-.=++|+..|+++. ||||+++.+++.+.+ .+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e---e~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE---ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH---HHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 4578888999999999999995 55799999999986444322 223468999999998 999999999997777 99
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++|||||+. +|.+++..+ .+.+++.++..|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+|+.
T Consensus 86 ~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 999999965 999999876 36899999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCCcccccccccccCccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc--------------cccccc
Q 016009 281 LKPDSSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--------------SFLNTD 345 (397)
Q Consensus 281 ~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--------------~~~~~~ 345 (397)
.... ...+..+.|-.|+|||++. .+-|+.+.|+|++||+++|+.+-++-|......+. .+.. .
T Consensus 160 v~Sk-pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e-g 237 (538)
T KOG0661|consen 160 VRSK-PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE-G 237 (538)
T ss_pred cccC-CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh-H
Confidence 7643 3346678999999999765 66799999999999999999998887765443321 1110 0
Q ss_pred cccccccCCCCCCCCc-----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 346 IELDEMLDPRLPAPSR-----SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 346 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+...++-.++.... .......+..+++.+|++.||++|||+.|.+++
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1122222222221111 112345678899999999999999999999875
No 30
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-44 Score=357.43 Aligned_cols=254 Identities=27% Similarity=0.450 Sum_probs=207.2
Q ss_pred CCCCCccccccCcEEEEEEEeC--CCC----EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP--SGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
..+..+.||+|.||.||.|... +|. .||+|.+....+ .....+|++|..+|++++|||||+++|+|.+...
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~---~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS---EQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC---HHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 3445677999999999999664 343 499999876332 3457899999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHhhccccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 200 SFLVYEFLKRGSLAAILSSDAA----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
.++++|||++|+|..+|++.+. ...++....+.++.+||+|+.||+++ ++|||||.++|+||++...+||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 9999999999999999987632 23588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCccc-c-cccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc
Q 016009 276 GIAKFLKPDSSNWTE-F-AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEML 352 (397)
Q Consensus 276 g~~~~~~~~~~~~~~-~-~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
|+|+.+......... . .-...|||||.+..+.++.|+|||||||++||++| |..||......... .....
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~-------~~~~~ 919 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL-------LDVLE 919 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH-------HHHHh
Confidence 999954433332221 1 23468999999999999999999999999999999 99998754432211 11222
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 353 DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+++.|.. ++..+.+++..||+.+|++||++..++++++
T Consensus 920 ggRL~~P~~----CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 920 GGRLDPPSY----CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred CCccCCCCC----CChHHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 335555443 4456889999999999999999999999764
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-45 Score=306.64 Aligned_cols=239 Identities=25% Similarity=0.351 Sum_probs=200.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||.|+||.|.+++.+ +|..+|+|++....- ......+...+|..+|+.+.||.++++++.+.+.+.+++|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v-VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV-VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH-HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 46778899999999999999655 688999999875221 1222345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||++||-|..+++..+ +++++.++-++.+|+.||+|||+. +|++|||||+|||+|.+|.+||+|||+|+....
T Consensus 123 meyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EeccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999997654 599999999999999999999999 999999999999999999999999999997654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
. .-+.+||+.|+|||.+....+..++|.|+|||++|||+.|.+||....... .-+.++...+.-|..
T Consensus 197 r---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~--------iY~KI~~~~v~fP~~-- 263 (355)
T KOG0616|consen 197 R---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ--------IYEKILEGKVKFPSY-- 263 (355)
T ss_pred c---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH--------HHHHHHhCcccCCcc--
Confidence 3 345799999999999999999999999999999999999999987544321 122333333333332
Q ss_pred HHHHHHHHHHHHHccCCCCCCC
Q 016009 364 QEKLRSIVEVVFSCLNESPESR 385 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~R 385 (397)
....+.+|+...++.|-.+|
T Consensus 264 --fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 264 --FSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --cCHHHHHHHHHHHhhhhHhh
Confidence 23347888889999998888
No 32
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-45 Score=339.16 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=206.7
Q ss_pred CCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
-|+..+.||.|+-|.|-.|+ ..+|+.+|||.+..... ........+.+|+-+|+-+.|||++++++++++..++|+|.
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~-~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSE-LSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccc-cccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 46667889999999999995 56899999999876422 11223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|-|.+++-..+ ++++.+..+++.||+.|+.|+|.. +|+||||||+|+|||.++.+||+|||+|..-. +
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-P 164 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-C
Confidence 9999999999997655 589999999999999999999999 99999999999999999999999999998543 4
Q ss_pred CCCcccccccccccCcccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
+....+.+|++.|.|||+++|.+|. .++||||.||+||.|+||+.||++..- ..++.+-.......+
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi------------r~LLlKV~~G~f~MP 232 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI------------RVLLLKVQRGVFEMP 232 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH------------HHHHHHHHcCcccCC
Confidence 4555677999999999999999985 689999999999999999999984321 111111111111112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+.+..+|+.+|+..||++|.|++||+++
T Consensus 233 s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 233 SNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2344558899999999999999999999986
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.8e-45 Score=336.97 Aligned_cols=245 Identities=23% Similarity=0.280 Sum_probs=197.2
Q ss_pred ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccC
Q 016009 131 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 209 (397)
+.||+|+||.||++.. .+|+.||+|++..... ........+..|++++++++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI-IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 3599999999999965 4789999999864211 1112345678899999999999999999999999999999999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcc
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 289 (397)
|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 80 GELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 99999986543 589999999999999999999998 999999999999999999999999999875433333334
Q ss_pred cccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 016009 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRS 369 (397)
Q Consensus 290 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. .....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~ 221 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPR----TLSPE 221 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHH
Confidence 567999999999999989999999999999999999999998532211 001111111111111 22345
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 370 IVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 370 l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
+.+++.+||+.||++|| ++.+++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 88999999999999999 79988763
No 34
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-45 Score=337.52 Aligned_cols=259 Identities=27% Similarity=0.428 Sum_probs=205.3
Q ss_pred HHHHhcCCCCCccccccCcEEEEEEEeCC--C--CE-EEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEE
Q 016009 120 IVRATNDFDAQYCIGNGGHGSVYRAELPS--G--QV-VAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFC 194 (397)
Q Consensus 120 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~--~--~~-vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 194 (397)
|+-.-++-...++||+|+||.||+|++.. + .. ||||..+... ........+|++|++++++++|||||+++|++
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~-~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS-ELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc-cccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 33334455556889999999999996543 3 23 8999987522 22334578999999999999999999999999
Q ss_pred ecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEee
Q 016009 195 SHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVAD 274 (397)
Q Consensus 195 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 274 (397)
.....+++|||+|+||+|.++|..... .++..++..++.+.|+||+|||++ +++||||.++|+|++.++.+||+|
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISD 305 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISD 305 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCc
Confidence 999999999999999999999987653 699999999999999999999999 999999999999999999999999
Q ss_pred eccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccc-c
Q 016009 275 FGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEM-L 352 (397)
Q Consensus 275 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~-~ 352 (397)
||+++....-........-...|+|||.+..+.++.++|||||||++||+.+ |..||........ ...+ .
T Consensus 306 FGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v--------~~kI~~ 377 (474)
T KOG0194|consen 306 FGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV--------KAKIVK 377 (474)
T ss_pred cccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH--------HHHHHh
Confidence 9998764311111111234678999999999999999999999999999999 8889876553211 1111 1
Q ss_pred -CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 353 -DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 353 -~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+-+.+.+. ..+..+..++.+||..+|++||||.++.+.|+
T Consensus 378 ~~~r~~~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 378 NGYRMPIPS----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred cCccCCCCC----CCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 11222222 22345777888999999999999999999886
No 35
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-45 Score=339.07 Aligned_cols=246 Identities=26% Similarity=0.349 Sum_probs=205.1
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCee
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 200 (397)
..++|...++||+|.||+|+++..+ +++.+|||++++..- ....+.+..+.|.+|+... +||.++.++.++++++++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I-l~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI-LQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccce-eccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3568999999999999999999765 688999999987432 2334567788899998888 599999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
|+||||+.||++..+.+. +.+++..+.-++..|+.||+|||++ +||+||||.+|||||.+|.+||+|||+++.
T Consensus 445 ~fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 999999999995444332 3599999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 281 LKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 281 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
.-......++.+||+.|||||++.+..|+...|.|||||+||||+.|..||.... .++++|.-+....
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd------------Eee~FdsI~~d~~ 585 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD------------EEEVFDSIVNDEV 585 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC------------HHHHHHHHhcCCC
Confidence 6544556678899999999999999999999999999999999999999987322 2223332222222
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTM 388 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~ 388 (397)
.++...+.+...++.+.+.++|++|.-+
T Consensus 586 ~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 586 RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 3333445668889999999999999765
No 36
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.6e-44 Score=337.57 Aligned_cols=255 Identities=24% Similarity=0.421 Sum_probs=201.2
Q ss_pred hcCCCCCccccccCcEEEEEEEe------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEec
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSH 196 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 196 (397)
.++|+..+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|+++++.+ +||||++++++|..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC---cHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 45788899999999999999953 2466899999864322 22356788999999999 89999999999999
Q ss_pred CCeeeEEEEeccCCCHHHhhccccc-------------------------------------------------------
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAA------------------------------------------------------- 221 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 221 (397)
.+..++||||+++|+|.+++.....
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 9999999999999999999864321
Q ss_pred -----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 222 -----------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 222 -----------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 12478999999999999999999998 9999999999999999999999999999865433
Q ss_pred CCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC--CCCC
Q 016009 285 SSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPR--LPAP 359 (397)
Q Consensus 285 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 359 (397)
... .....++..|+|||.+.+..++.++||||||+++|||++ |..||........ ....+... ...+
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~ 339 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK--------FYKMIKEGYRMLSP 339 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH--------HHHHHHhCccCCCC
Confidence 221 112334667999999999999999999999999999998 8888764321100 00111111 0011
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. ....++.+++.+||+.||++|||+.||+++|+
T Consensus 340 ~----~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~ 372 (375)
T cd05104 340 E----CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372 (375)
T ss_pred C----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 1 11245889999999999999999999999987
No 37
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1e-44 Score=332.63 Aligned_cols=242 Identities=24% Similarity=0.320 Sum_probs=194.0
Q ss_pred ccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||+|+||.||++... +++.||+|.+..... ........+..|++++++++||||+++++++...+..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 699999999999654 688999999864211 112235678899999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccc
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 291 (397)
|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.............
T Consensus 80 L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 153 (312)
T cd05585 80 LFHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF 153 (312)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence 999986543 589999999999999999999998 99999999999999999999999999998644333333445
Q ss_pred cccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHH
Q 016009 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371 (397)
Q Consensus 292 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (397)
.||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+. .....+.
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~ 221 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--------EMYRKILQEPLRFPD----GFDRDAK 221 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCCCCC----cCCHHHH
Confidence 7899999999999999999999999999999999999998643211 011111111111111 2234588
Q ss_pred HHHHHccCCCCCCCCC---HHHHHH
Q 016009 372 EVVFSCLNESPESRPT---MKIVSQ 393 (397)
Q Consensus 372 ~l~~~cl~~~P~~RPt---~~~vl~ 393 (397)
+++.+||+.||++||+ +.+++.
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 9999999999999985 566654
No 38
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-45 Score=299.33 Aligned_cols=252 Identities=27% Similarity=0.412 Sum_probs=210.0
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+..+.||+|.||.||.|+. +++-.||+|++.+.. -......+++.+|+++-+.|+||||+++++++.+....||
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq-i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ-ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH-HHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 45788999999999999999965 478899999987532 2222335789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
++||.++|++...|.+... .++++.....++.|+|.|+.|+|.. +|+||||||+|+|++.++..|++|||.+..-.
T Consensus 100 ilEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 9999999999999986543 5688999999999999999999998 99999999999999999999999999987543
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.....+.+||..|.+||...+...+...|+|++|++.||++.|.+||..... ++...++..-++..|.
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------~etYkrI~k~~~~~p~-- 243 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------SETYKRIRKVDLKFPS-- 243 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--------HHHHHHHHHccccCCc--
Confidence 4455678999999999999999999999999999999999999999974431 1111222222222221
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......++|.+|+..+|.+|.+..|++.+
T Consensus 244 --~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 244 --TISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred --ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 223457899999999999999999999875
No 39
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.6e-45 Score=329.53 Aligned_cols=248 Identities=24% Similarity=0.320 Sum_probs=200.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEV-IRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHH-hhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 36888899999999999999764 789999999864211 1112346688999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 80 MEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999986543 588999999999999999999998 999999999999999999999999999886543
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
. .....|++.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.......+.
T Consensus 154 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--------~~~~i~~~~~~~~~--- 219 (291)
T cd05612 154 R---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--------IYEKILAGKLEFPR--- 219 (291)
T ss_pred C---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCcCCCc---
Confidence 2 223468999999999998889999999999999999999999986432210 01111111111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPT-----MKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt-----~~~vl~~ 394 (397)
.....+.+++.+||+.||.+||+ +++++++
T Consensus 220 -~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 220 -HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 11345889999999999999995 8888765
No 40
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.5e-44 Score=331.96 Aligned_cols=245 Identities=24% Similarity=0.293 Sum_probs=197.1
Q ss_pred ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccC
Q 016009 131 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 209 (397)
+.||+|+||.||++.. .+|+.||+|++...... .......+.+|+++++.++||||+++.+++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVII-AKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3589999999999965 47899999998642211 122356788999999999999999999999999999999999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcc
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 289 (397)
|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...........
T Consensus 80 g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 80 GELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 99998886543 589999999999999999999998 999999999999999999999999999875433333334
Q ss_pred cccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 016009 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRS 369 (397)
Q Consensus 290 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.......+. .....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--------~~~~~~~~~~~~p~----~~~~~ 221 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--------LFELILMEDIKFPR----TLSAD 221 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH--------HHHHhccCCccCCC----CCCHH
Confidence 4578999999999998899999999999999999999999986432110 01111111111111 22345
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 370 IVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 370 l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
+.+++.+||+.||++|| ++.+++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 78899999999999997 89998864
No 41
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-45 Score=331.21 Aligned_cols=254 Identities=21% Similarity=0.331 Sum_probs=214.5
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe-ee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH-SF 201 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~ 201 (397)
.++|...+.+|+|+||.++.++.+ ++..+++|.+....... ..++...+|+.++++++|||||.+.+.+..++. .+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~--~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE--PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc--hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 357888899999999999999654 67899999987543322 235578999999999999999999999998888 99
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+||+|++||++.+.+...+ ...++++++..|+.|++.|+.|||++ .|+|||||+.|||++.++.++|+|||+|+.+
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhc
Confidence 9999999999999998766 35689999999999999999999988 9999999999999999999999999999999
Q ss_pred CCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
.+.........||+.|+.||.+.+.+|..|+|||||||++|||++-+++|...... .-...+......+
T Consensus 157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~--------~Li~ki~~~~~~P--- 225 (426)
T KOG0589|consen 157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS--------ELILKINRGLYSP--- 225 (426)
T ss_pred CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH--------HHHHHHhhccCCC---
Confidence 87776667789999999999999999999999999999999999999998743321 1111122212111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+..++..++..|++.+|+.||++.+++.+
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 113455679999999999999999999999875
No 42
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.2e-44 Score=331.74 Aligned_cols=245 Identities=23% Similarity=0.283 Sum_probs=196.4
Q ss_pred ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccC
Q 016009 131 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 209 (397)
+.||+|+||.||++.. .+|+.||+|++...... .......+..|+++++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 3599999999999965 47899999998642211 112345678899999999999999999999999999999999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcc
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 289 (397)
|+|..++.... .+++..++.++.|++.||+|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 80 GELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 99998886543 589999999999999999999998 999999999999999999999999999875433333334
Q ss_pred cccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 016009 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRS 369 (397)
Q Consensus 290 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+. .....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~ 221 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEIRFPR----TLSPE 221 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCHH
Confidence 457899999999999989999999999999999999999998633211 011111111111111 22345
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 370 IVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 370 l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
+.+++.+||+.||++|| ++.+++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 78999999999999998 88888753
No 43
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.4e-44 Score=335.73 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=201.7
Q ss_pred HHHhcCCCCCccccccCcEEEEEEEe------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEE
Q 016009 121 VRATNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGF 193 (397)
Q Consensus 121 ~~~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 193 (397)
....++|...+.||+|+||.||+|.. .++..||+|++...... .....+.+|+++++.+ +|+||++++++
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT---DEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH---HHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 33455788899999999999999863 23457999998753221 2356788999999999 89999999999
Q ss_pred EecCCeeeEEEEeccCCCHHHhhcccc-----------------------------------------------------
Q 016009 194 CSHARHSFLVYEFLKRGSLAAILSSDA----------------------------------------------------- 220 (397)
Q Consensus 194 ~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------- 220 (397)
|...+..++||||+++|+|.+++....
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 999999999999999999999885321
Q ss_pred --------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 221 --------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 221 --------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
...++++.+++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++........
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 012478899999999999999999998 999999999999999999999999999976543221
Q ss_pred C--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC--CCCCc
Q 016009 287 N--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL--PAPSR 361 (397)
Q Consensus 287 ~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 361 (397)
. .....++..|+|||++.+..++.++||||||+++|||++ |+.||....... .......... ..+.
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--------~~~~~~~~~~~~~~~~- 338 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--------KFYKMVKRGYQMSRPD- 338 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--------HHHHHHHcccCccCCC-
Confidence 1 112234568999999998899999999999999999997 999986432210 0111111111 1111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+..+.+++.+||+.||++|||+.+|+++|+
T Consensus 339 ---~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~ 370 (374)
T cd05106 339 ---FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQ 370 (374)
T ss_pred ---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11345889999999999999999999999986
No 44
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.2e-43 Score=318.29 Aligned_cols=252 Identities=23% Similarity=0.389 Sum_probs=201.2
Q ss_pred cCCCCCccccccCcEEEEEEEeC----CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
++|++.+.||+|+||.||+|.+. .+..||+|.++.... ......+.+|+.++++++||||+++++++..++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS---DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 46788899999999999999653 356899999875322 12246789999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 99999999999999987543 3589999999999999999999998 999999999999999999999999998765
Q ss_pred cCCCCCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCC
Q 016009 281 LKPDSSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLP 357 (397)
Q Consensus 281 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 357 (397)
....... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||....... ....+.+. ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 228 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--------VIKAVEDGFRLP 228 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHHCCCCCC
Confidence 3222111 112234678999999999999999999999999999875 999986443211 01111111 111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+ ...+..+.+++.+||+.+|++|||+++|++.|+
T Consensus 229 ~~----~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 229 AP----RNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CC----CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 11 123456889999999999999999999999875
No 45
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.4e-44 Score=328.84 Aligned_cols=246 Identities=24% Similarity=0.350 Sum_probs=196.9
Q ss_pred ccccccCcEEEEEEEe----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 131 YCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
+.||+|+||.||++.. .+++.||+|.+..............+..|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5699999999999964 357899999986422111122345678899999999999999999999999999999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999986543 478889999999999999999998 999999999999999999999999999875433333
Q ss_pred CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHH
Q 016009 287 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366 (397)
Q Consensus 287 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
......|++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.......+.. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--------~~~~~~~~~~~~~~~~----~ 223 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--------KTIDKILKGKLNLPPY----L 223 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCC----C
Confidence 334457899999999999888999999999999999999999998643321 1112222222222221 2
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 367 LRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 367 ~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
...+.+++.+||+.||++|| ++++++++
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 34588999999999999999 78887753
No 46
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.7e-44 Score=331.12 Aligned_cols=248 Identities=25% Similarity=0.309 Sum_probs=200.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+.+|++++++++||||+++++++..++..++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI-LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 46888899999999999999765 689999999864211 1112346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999987543 588899999999999999999998 999999999999999999999999999986543
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.. ....|++.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......+..
T Consensus 171 ~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--------~~~~i~~~~~~~p~~-- 237 (329)
T PTZ00263 171 RT---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR--------IYEKILAGRLKFPNW-- 237 (329)
T ss_pred Cc---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH--------HHHHHhcCCcCCCCC--
Confidence 22 23578999999999999889999999999999999999999986432211 011111222221111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPT-----MKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt-----~~~vl~~ 394 (397)
....+.+++.+||+.||++||+ +++++++
T Consensus 238 --~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 238 --FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred --CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1234788999999999999997 6887754
No 47
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-44 Score=325.53 Aligned_cols=259 Identities=24% Similarity=0.380 Sum_probs=207.8
Q ss_pred CCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
...+.++||+|.||.|.++....+..||||+++.... .....+|.+|+++|.+++||||++++|+|..++.+++|+|
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~---~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT---KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccc---hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 4456788999999999999998889999999986433 2346899999999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
||++|+|.+++..+.... +.-....+|+.|||.||+||.+. ++|||||.++|+|+|.++++||+|||+++.+...+
T Consensus 616 YmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCC
Confidence 999999999998875422 34556678999999999999998 99999999999999999999999999999766554
Q ss_pred CCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCccccccccccccccccccccCCC-CCCCC
Q 016009 286 SNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK--GKHPRDFLSSISSSFLNTDIELDEMLDPR-LPAPS 360 (397)
Q Consensus 286 ~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 360 (397)
... ...+-.++|||+|.+..++++++||||+||+++||+++ ...||..+...... +...++++.. ...-.
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv-----en~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV-----ENAGEFFRDQGRQVVL 766 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH-----HhhhhhcCCCCcceec
Confidence 433 23455789999999999999999999999999999875 78888755432100 0111111111 00000
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.-++..+.+++..||..|-++|||++++...|+
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 111234456889999999999999999999998875
No 48
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-43 Score=317.72 Aligned_cols=255 Identities=29% Similarity=0.545 Sum_probs=208.8
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
++..+|+..+.||.|+||.||+|...++..+++|.+.... ......+..|+++++.++|+||+++++++...+..+
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVY 78 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeE
Confidence 4556788899999999999999988889999999986522 223567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+||||+++++|.+++..... ..+++.+++.++.+++.|++|||+. +++|+||+|+||++++++.+||+|||.+...
T Consensus 79 lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLI 154 (261)
T ss_pred EEEeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhc
Confidence 99999999999999976442 4689999999999999999999998 9999999999999999999999999999866
Q ss_pred CCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLPAP 359 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 359 (397)
...........++..|+|||...+..++.++||||||+++|+|++ |+.||....... ....+... ..+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~ 226 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--------VYDQITAGYRMPCP 226 (261)
T ss_pred CCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--------HHHHHHhCCcCCCC
Confidence 433322233345778999999988889999999999999999998 899986433210 11111111 11111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 227 ----~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 227 ----AKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred ----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 123356889999999999999999999999986
No 49
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-43 Score=325.63 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=202.6
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+..+.||+|+||.||++... +|..+|+|.+..... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 357888999999999999999665 688899999865321 2235679999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ +++||||||+||+++.++.++|+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred EeecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 999999999999996543 4889999999999999999999852 69999999999999999999999999987654
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc------cccccccc---------
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS------SFLNTDIE--------- 347 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~------~~~~~~~~--------- 347 (397)
.. ......|+..|+|||.+.+..++.++|||||||++|||+||+.||........ ........
T Consensus 156 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 156 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred cc--ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccc
Confidence 32 22335689999999999998999999999999999999999999864321100 00000000
Q ss_pred -----------------------cccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 348 -----------------------LDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 348 -----------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+.....+ ..........+.+|+.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPP--KLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCc--CCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 00001234568999999999999999999999875
No 50
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.8e-43 Score=320.71 Aligned_cols=261 Identities=20% Similarity=0.285 Sum_probs=198.9
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||+|... +++.||+|.++..... .....+.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC---CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 46888999999999999999654 7899999998643221 1235678999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 82 ~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 82 FEYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred EeCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 999975 8988886543 3578999999999999999999998 999999999999999999999999999976543
Q ss_pred CCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccc--------------ccc--cccc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--------------SFL--NTDI 346 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--------------~~~--~~~~ 346 (397)
.........+++.|+|||.+.+ ..++.++||||+||++|||+||+.||........ .+. ....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 156 PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred CCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 3333344578999999998865 5689999999999999999999999864321100 000 0000
Q ss_pred ccccccCCCCCCCC--cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEMLDPRLPAPS--RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+...... ........+..+++.+|++.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00111111110000 0000112457899999999999999999999874
No 51
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.7e-43 Score=319.59 Aligned_cols=250 Identities=22% Similarity=0.289 Sum_probs=196.1
Q ss_pred ccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||+|+||+||++.. .+|+.||+|.+..... ......+.+..|+++++.++|+||+++.+++..+...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL-KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHH-hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 69999999999965 4789999999864221 111223567889999999999999999999999999999999999999
Q ss_pred HHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCccc
Q 016009 212 LAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTE 290 (397)
Q Consensus 212 L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 290 (397)
|.+++.... ....+++.++..++.|++.||.|||+. +++||||||+||++++++.++|+|||++............
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence 998874322 224689999999999999999999998 9999999999999999999999999999766544333344
Q ss_pred ccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 016009 291 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSI 370 (397)
Q Consensus 291 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 370 (397)
..|++.|+|||.+.+..++.++||||||+++|||++|+.||......... ......+.......+ ...+..+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~ 228 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN----KELKQRILNDSVTYP----DKFSPAS 228 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH----HHHHHhhcccCCCCc----ccCCHHH
Confidence 57899999999999999999999999999999999999998643211000 000111111111111 2234568
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 371 VEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 371 ~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
.+++.+||+.||++|| ++++++++
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 8999999999999999 77777753
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.2e-44 Score=331.03 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=202.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|... +++.||+|++..... ........+..|+++++.++||||+++++++...+..++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL-FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 36888899999999999999765 689999999864211 1112346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 80 MEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999996543 588999999999999999999998 999999999999999999999999999976543
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
......||+.|+|||++.+..++.++|||||||++|||++|+.||............ .........+....+ .
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~---~ 226 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL-KYWKETLQRPVYDDP---R 226 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHH-HhccccccCCCCCcc---c
Confidence 223457899999999999989999999999999999999999998643321100000 000000001111100 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.+|++||++++++++
T Consensus 227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1234568899999999999999999999875
No 53
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-44 Score=318.78 Aligned_cols=258 Identities=24% Similarity=0.344 Sum_probs=203.5
Q ss_pred HHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcc----------hhcHHHHHHHHHHHHhccCCceeee
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQ----------IVDKKEFLTEVEALTEIRHRNIVKL 190 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~~ 190 (397)
+..++|+..+.||+|.||.|-+|.. .+++.||||++.+.....+ ....+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3457899999999999999999954 4799999999865322111 1123578999999999999999999
Q ss_pred EEEEecC--CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC
Q 016009 191 YGFCSHA--RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF 268 (397)
Q Consensus 191 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 268 (397)
+.+..+. +.+|||+|||..|.+...-. ....+++.+.++++.++..||.|||.+ +||||||||+|+|++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 9998665 57899999999888754322 112389999999999999999999999 999999999999999999
Q ss_pred cEEEeeeccccccCCC-----CCCcccccccccccCcccccCCC----CCcchhhHHHHHHHHHHHhCCCCCCccccccc
Q 016009 269 EAHVADFGIAKFLKPD-----SSNWTEFAGTYGYVAPELAYTMK----ITEKCDVYSFGVLALEVIKGKHPRDFLSSISS 339 (397)
Q Consensus 269 ~~kl~Dfg~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~ 339 (397)
++||+|||.+...... .......+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-....+
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~-- 325 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL-- 325 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH--
Confidence 9999999999876332 12234478999999999887743 356889999999999999999998643321
Q ss_pred cccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 340 SFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
+-.+.+++..+..|.. .+....+.+||.++|.+||++|.+..+|..+.
T Consensus 326 ------~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 326 ------ELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred ------HHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 1233444444443332 24456688999999999999999999987653
No 54
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.4e-44 Score=323.53 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=201.0
Q ss_pred HhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
..++|+....||+|+||.||+++. .+|..+|+|++++..- ......+.+..|-.+|....+|+||+++-.|++...+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M-~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM-LKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH-HhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 457899999999999999999954 5799999999986322 22234566888999999999999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
|||||++||++..+|.... .|++.....++.+++.|+.-+|+. |+|||||||+|+|||..|++||+|||++.-+
T Consensus 218 LiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999997654 599999999999999999999999 9999999999999999999999999998532
Q ss_pred CC-----------------------CCC----Cc--------------------ccccccccccCcccccCCCCCcchhh
Q 016009 282 KP-----------------------DSS----NW--------------------TEFAGTYGYVAPELAYTMKITEKCDV 314 (397)
Q Consensus 282 ~~-----------------------~~~----~~--------------------~~~~g~~~y~aPE~~~~~~~~~~~Dv 314 (397)
.. +.. .. ...+|||.|+|||++.+..|+..+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 11 000 00 13469999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC---HH
Q 016009 315 YSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT---MK 389 (397)
Q Consensus 315 ~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~ 389 (397)
||+||++|||+.|-+||....+.. ....+++ ..+..|.. .....+..+||.+|+. ||++|.- ++
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~--------T~rkI~nwr~~l~fP~~--~~~s~eA~DLI~rll~-d~~~RLG~~G~~ 440 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQE--------TYRKIVNWRETLKFPEE--VDLSDEAKDLITRLLC-DPENRLGSKGAE 440 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHHHhhhccCCCc--CcccHHHHHHHHHHhc-CHHHhcCcccHH
Confidence 999999999999999997544321 0111111 11111111 1222568899999999 9999964 66
Q ss_pred HHHH
Q 016009 390 IVSQ 393 (397)
Q Consensus 390 ~vl~ 393 (397)
||-+
T Consensus 441 EIK~ 444 (550)
T KOG0605|consen 441 EIKK 444 (550)
T ss_pred HHhc
Confidence 6543
No 55
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.9e-43 Score=312.03 Aligned_cols=250 Identities=26% Similarity=0.477 Sum_probs=201.7
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
++|+..+.||+|+||.||++...++..+|+|.+.... ...+++.+|++++++++||||+++++++...+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 4677888999999999999998888899999876321 22467899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+++.... ..+++..+..++.+++.||.|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 79 EFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 9999999999987543 2589999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCc
Q 016009 285 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLPAPSR 361 (397)
Q Consensus 285 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 361 (397)
... .....++..|+|||...+..++.++||||||+++|||++ |+.||....... ....+... ....+.
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~--------~~~~i~~~~~~~~~~- 224 (256)
T cd05114 154 EYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE--------VVEMISRGFRLYRPK- 224 (256)
T ss_pred ceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHHCCCCCCCCC-
Confidence 211 122234568999999988889999999999999999999 899986433211 01111111 111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+++.+||+.+|++|||+.++++.|.
T Consensus 225 ---~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 ---LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12345889999999999999999999999873
No 56
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.6e-43 Score=330.19 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=192.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|+||.||+|... +++.||+|++.... .......+.+|+++++.++|+||+++++++...+..++||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 4556788999999999999654 78999999986422 1223567899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+.. ..++..+..++.||+.||+|||+. +++||||||+|||+++++.+||+|||++......
T Consensus 152 e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 152 EFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred ecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999986532 356778889999999999999998 9999999999999999999999999999876543
Q ss_pred CCCcccccccccccCcccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 285 SSNWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
........|+..|+|||.+.. ...+.++|||||||++|||++|+.||....... +. .....+.....
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~---~~~~~~~~~~~--- 293 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WA---SLMCAICMSQP--- 293 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HH---HHHHHHhccCC---
Confidence 333344578999999998743 224568999999999999999999986321100 00 00000000000
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..........+.+++.+||+.||++|||+.|++++
T Consensus 294 ~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111234568899999999999999999999875
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.6e-43 Score=322.07 Aligned_cols=262 Identities=20% Similarity=0.302 Sum_probs=198.2
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|+++++.++||||+++++++..+...++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE---GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc---ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence 467889999999999999999765 7899999998643221 123457789999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++....
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred EEECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 999996 57877775543 3588899999999999999999998 99999999999999999999999999987554
Q ss_pred CCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc--------cccc------c
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL--------NTDI------E 347 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~--------~~~~------~ 347 (397)
..........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||........... .... .
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 155 VPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 33333344578999999998765 4578899999999999999999999975432110000 0000 0
Q ss_pred cccccCCCCCC-CCcchH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 348 LDEMLDPRLPA-PSRSVQ------EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 348 ~~~~~~~~~~~-~~~~~~------~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
........... ...... .....+.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000000000 000000 012457799999999999999999999864
No 58
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-44 Score=294.22 Aligned_cols=260 Identities=25% Similarity=0.358 Sum_probs=208.0
Q ss_pred hcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC-----
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA----- 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 197 (397)
.++|++.+.||+|||+-||.++ ..++..+|+|++.-+. ..+.+..++|++..++++|||+++++++...+
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 3578899999999999999995 6688999999987533 23467889999999999999999999987433
Q ss_pred CeeeEEEEeccCCCHHHhhccccccC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeec
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQ-ELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~-~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 276 (397)
.+.||+++|...|+|.+.+......+ .+++.+.+.|+.++++||.+||+.. ++++||||||.||++++.+.+++.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEecc
Confidence 45899999999999999997654433 6899999999999999999999973 359999999999999999999999999
Q ss_pred cccccCCCCCC---------cccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccc
Q 016009 277 IAKFLKPDSSN---------WTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT 344 (397)
Q Consensus 277 ~~~~~~~~~~~---------~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~ 344 (397)
.++...-.... +....-|..|.|||.+. +...++++|||||||+||+|+.|..||+.... .+
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------~G 248 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------QG 248 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh------cC
Confidence 98865322111 12345688999999876 44578999999999999999999999974332 11
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 345 DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..-.-.+.++.+..|.... ++..+.+++.+|++.||.+||++.+++..++
T Consensus 249 gSlaLAv~n~q~s~P~~~~--yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 249 GSLALAVQNAQISIPNSSR--YSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred CeEEEeeeccccccCCCCC--ccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 1112233344444333322 5667999999999999999999999998875
No 59
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.5e-44 Score=319.58 Aligned_cols=248 Identities=34% Similarity=0.553 Sum_probs=191.1
Q ss_pred CccccccCcEEEEEEEeC-----CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 130 QYCIGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.+.||.|.||.||+|.+. .+..|+||.++.. ......+.+.+|++.+++++||||++++|++...+..++|+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS---SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT---SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc---cccccceeeeecccccccccccccccccccccccccccccc
Confidence 467999999999999765 3568999999642 22223688999999999999999999999999888899999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+++.... ...+++.+++.|+.|+++||+|||+. +++|+||+++||++++++.+||+|||++......
T Consensus 81 e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp E--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 9999999999998762 24689999999999999999999998 9999999999999999999999999999876322
Q ss_pred CCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 285 SSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 285 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
... .........|+|||.+....++.++||||||+++|||++ |+.|+....... ....+.+.......
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~--------~~~~~~~~~~~~~~- 227 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE--------IIEKLKQGQRLPIP- 227 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH--------HHHHHHTTEETTSB-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccceec-
Confidence 111 123456778999999998889999999999999999999 788876442211 01111111111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
......+.+++..||+.||++|||++++++.|
T Consensus 228 --~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 --DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 12234588999999999999999999999986
No 60
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.6e-43 Score=313.66 Aligned_cols=260 Identities=20% Similarity=0.291 Sum_probs=206.1
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|++.+.||+|+||.||+|.. .+++.||+|.+..... ........+.+|+++++.++|||++++++++...+..+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 4788899999999999999965 4789999998764221 2223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDAA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
+||+++++|.+++..... ...+++.++..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 999999999988854321 23578999999999999999999998 99999999999999999999999999988765
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
..........++..|+|||.+.+..++.++|+||||+++|||++|+.|+......... ....+.....+ ...
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~------~~~~~~~~~~~--~~~ 229 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS------LCQKIEQCDYP--PLP 229 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH------HHHHHhcCCCC--CCC
Confidence 4333333456888999999998888999999999999999999999997532210000 00111111111 111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.......+.+++.+||+.+|++||++.+|++.|+
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 1234456899999999999999999999999875
No 61
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.1e-43 Score=317.72 Aligned_cols=255 Identities=25% Similarity=0.447 Sum_probs=202.9
Q ss_pred cCCCCCccccccCcEEEEEEEeCC------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
++|+..+.||+|+||.||+|.... ...|++|.+..... ......+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE---PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC---HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 467888999999999999996532 25799999864221 223567899999999999999999999999989
Q ss_pred eeeEEEEeccCCCHHHhhccccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 265 (397)
..+++|||+++++|.+++..... ...+++.+++.++.|++.||+|||+. +++|+||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVG 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEc
Confidence 99999999999999999865421 13588999999999999999999998 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccc
Q 016009 266 LEFEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342 (397)
Q Consensus 266 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~ 342 (397)
+++.++|+|||++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---- 234 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---- 234 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH----
Confidence 999999999999876533221 1223456788999999988889999999999999999998 999976432210
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+....... .....+.++.+|+.+||+.||++||+++||+++|+
T Consensus 235 ----~~~~i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 235 ----VIEMIRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred ----HHHHHHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 011111111111 11234567999999999999999999999999986
No 62
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.1e-43 Score=320.33 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=201.3
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||++... +++.||+|++...... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN--EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence 46888899999999999999765 6889999998753221 22356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||++++++..+.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 79 FEYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred EecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9999998777654322 3589999999999999999999998 999999999999999999999999999987643
Q ss_pred CCC-CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc----------------cccc
Q 016009 284 DSS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL----------------NTDI 346 (397)
Q Consensus 284 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~----------------~~~~ 346 (397)
... ......|+..|+|||++.+..++.++|||||||++|||++|+.||........... ....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 322 22345689999999999988899999999999999999999999864332110000 0000
Q ss_pred ccccccCCCCCCCCc----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEMLDPRLPAPSR----SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+....+.. ........+.+++.+||+.||++|||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000000000 001134568999999999999999999999864
No 63
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-43 Score=328.15 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=199.8
Q ss_pred cCCCCCccccccCcEEEEEEEeCC--CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
++|...+.||+|+||.||+|...+ +..||+|++..... ......+.+.+|+++++.++||||+++++++...+..++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 468888999999999999996543 36899998753211 111234568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999997543 589999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......+..
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--------~~~~i~~~~~~~p~~- 250 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL--------IYQKILEGIIYFPKF- 250 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH--------HHHHHhcCCCCCCCC-
Confidence 32 234578999999999998889999999999999999999999986433211 011111211111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
....+.+++.+|++.||++|+ ++++++++
T Consensus 251 ---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 251 ---LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 123477899999999999995 89998764
No 64
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-43 Score=337.81 Aligned_cols=250 Identities=22% Similarity=0.338 Sum_probs=205.2
Q ss_pred CCCCCccccccCcEEEEEEEeCCC-CEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEE-EEe-----c-
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSG-QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYG-FCS-----H- 196 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~-~~~-----~- 196 (397)
+.++.+.|.+|||+.||.|....+ ..+|+|++... +....+.+.+|+++|++|+ |+|||.+++ ... .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 456778899999999999976655 99999998753 3445788999999999996 999999999 331 1
Q ss_pred CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeec
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 276 (397)
..+.+|.||||.||+|-+++..+... .|++.++++|+.++++|+++||.. .++|||||||-+||||+.++..||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 24678999999999999999866543 499999999999999999999995 5689999999999999999999999999
Q ss_pred cccccCCCCCCc---------ccccccccccCcccc---cCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccc
Q 016009 277 IAKFLKPDSSNW---------TEFAGTYGYVAPELA---YTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT 344 (397)
Q Consensus 277 ~~~~~~~~~~~~---------~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~ 344 (397)
.+.......... -...-|+.|+|||++ .+...++|+|||+|||+||-|+...+||+...
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------- 262 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------- 262 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---------
Confidence 987543322111 123468999999975 47789999999999999999999999998432
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 345 DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
...|++.....|.. +.+...|.+||..||+.||++||++-+|+..+
T Consensus 263 ---~laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 263 ---KLAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred ---ceeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 23444545443332 46677899999999999999999999999876
No 65
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.1e-43 Score=329.31 Aligned_cols=258 Identities=23% Similarity=0.392 Sum_probs=202.2
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEE
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFC 194 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 194 (397)
...++|.+.+.||+|+||.||+|... .+..||||++..... ....+.+.+|+++++++. ||||++++++|
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR---SSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 34567888899999999999999642 234799999865322 223567999999999996 99999999999
Q ss_pred ecCCeeeEEEEeccCCCHHHhhccccc-----------------------------------------------------
Q 016009 195 SHARHSFLVYEFLKRGSLAAILSSDAA----------------------------------------------------- 221 (397)
Q Consensus 195 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 221 (397)
......++||||+++|+|.+++.....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 999999999999999999998864210
Q ss_pred ----------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCc
Q 016009 222 ----------------------------------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN 261 (397)
Q Consensus 222 ----------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 261 (397)
...+++.++..++.|++.||+|||+. +++|+||||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~N 267 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARN 267 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHh
Confidence 12478889999999999999999998 99999999999
Q ss_pred EEeCCCCcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccc
Q 016009 262 LLLDLEFEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSIS 338 (397)
Q Consensus 262 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~ 338 (397)
|++++++.+||+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 9999999999999999986543222 1122346778999999998889999999999999999997 999976432110
Q ss_pred ccccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 339 SSFLNTDIELDEMLDP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 339 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. ....+... ....+ ......+.+++.+||+.||++|||+.+|.++|+
T Consensus 348 ~-------~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~ 395 (400)
T cd05105 348 T-------FYNKIKSGYRMAKP----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE 395 (400)
T ss_pred H-------HHHHHhcCCCCCCC----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence 0 00000000 11111 123456889999999999999999999999885
No 66
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.6e-43 Score=316.44 Aligned_cols=257 Identities=22% Similarity=0.380 Sum_probs=202.0
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH 196 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 196 (397)
.+++|+..+.||+|+||.||+|... ++..||+|++.... ......++.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4678999999999999999998643 35679999875422 12235678999999999999999999999999
Q ss_pred CCeeeEEEEeccCCCHHHhhccccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAA-------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE 269 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 269 (397)
....++||||+++++|.+++..... ...+++.++..++.|++.||.|||+. +++|+||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCC
Confidence 9999999999999999999865321 12468899999999999999999998 9999999999999999999
Q ss_pred EEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 016009 270 AHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI 346 (397)
Q Consensus 270 ~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 346 (397)
++|+|||++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||...... .
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~ 229 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------Q 229 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------H
Confidence 999999998755432211 112345678999999998889999999999999999999 78887543221 0
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 347 ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+......... ......+.+++.+||+.||++|||+.|++++|+
T Consensus 230 ~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 230 VLRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11111111111111 122346889999999999999999999999986
No 67
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.4e-44 Score=312.61 Aligned_cols=249 Identities=24% Similarity=0.385 Sum_probs=206.8
Q ss_pred cCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.+|++.+.||+|.||.|-++. ...|+.||||.+++.. -....+.-.+.+|++||+.|+||||+.++.+|++.+...+|
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk-IkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK-IKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh-cccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 357777889999999999994 5789999999998633 33344556788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||..+|.|.+++.+.+ .+++.+.+.++.||..|+.|+|.+ +++|||||.+|||+|.|+++||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc-
Confidence 99999999999998765 599999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccCcccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
......+++|++-|.+||+..+.+|. +..|.||||++||-|+.|..||+.-... .+ +..+-......|.
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~l-----vrQIs~GaYrEP~-- 274 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---RL-----VRQISRGAYREPE-- 274 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---HH-----HHHhhcccccCCC--
Confidence 33455778999999999999998874 6899999999999999999999843221 11 1112122222111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+....-||.+||..+|++|.|+++|..+
T Consensus 275 ---~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 275 ---TPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred ---CCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 11225568889999999999999999865
No 68
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4e-43 Score=323.73 Aligned_cols=248 Identities=26% Similarity=0.343 Sum_probs=194.4
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHH---HhccCCceeeeEEEEecCCeeeE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEAL---TEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~l 202 (397)
|++.+.||+|+||.||+|.. .+++.||||+++..... .....+.+..|.+++ +.++||||+++++++...+..++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 55678899999999999965 47899999998642111 111235566676655 56689999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+++|+|..++.. ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 80 v~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 80 VMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999999988854 3589999999999999999999998 99999999999999999999999999987543
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
..........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+.
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~p~-- 222 (324)
T cd05589 153 GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDEVRYPR-- 222 (324)
T ss_pred CCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC--
Confidence 3333334567899999999999989999999999999999999999998643221 011111111111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
.....+.+++.+||+.||++|| ++.+++++
T Consensus 223 --~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 223 --FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred --CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1234578899999999999999 57777653
No 69
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.6e-43 Score=326.62 Aligned_cols=245 Identities=23% Similarity=0.286 Sum_probs=195.8
Q ss_pred ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccC
Q 016009 131 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 209 (397)
+.||+|+||.||++.. .+|+.||+|.+...... .......+..|+++++.++||||+++.+++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3599999999999964 57899999998642211 112345678899999999999999999999999999999999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
|+|.+++.... .+++.++..++.|++.||+|||+ . +++||||||+|||++.++.+||+|||++..........
T Consensus 80 ~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 80 GELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 99999886543 58999999999999999999997 6 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~~~~~~~p~----~~~~ 221 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPR----TLSP 221 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCH
Confidence 4457999999999999989999999999999999999999998532211 011111111111111 1234
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 369 SIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
.+.+++.+||+.||++|+ ++.+++++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 588899999999999996 89998864
No 70
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.3e-43 Score=323.93 Aligned_cols=252 Identities=25% Similarity=0.330 Sum_probs=195.5
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||++... +++.||+|.+...... .....+.+..|+.++.++ +||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence 35999999999999754 6889999998753221 122345678899988877 89999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|..++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 80 GGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 99999888654 3589999999999999999999998 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccc-ccccccCCCCCCCCcchHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDI-ELDEMLDPRLPAPSRSVQEKL 367 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 367 (397)
....||..|+|||++.+..++.++||||||+++|||++|+.||............... ....+.......+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~----~~~ 229 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 229 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC----CCC
Confidence 4467899999999999999999999999999999999999998643221110000000 01111222222221 223
Q ss_pred HHHHHHHHHccCCCCCCCCC------HHHHHH
Q 016009 368 RSIVEVVFSCLNESPESRPT------MKIVSQ 393 (397)
Q Consensus 368 ~~l~~l~~~cl~~~P~~RPt------~~~vl~ 393 (397)
..+.+++.+||+.||++||+ +.++++
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 45789999999999999998 467654
No 71
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.4e-43 Score=323.97 Aligned_cols=253 Identities=25% Similarity=0.338 Sum_probs=196.8
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||++... +++.||+|+++.... ......+.+..|..++..+ +||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV-NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 35999999999999654 688999999874221 1122345688899999998 79999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 80 GGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 99999888654 3589999999999999999999998 99999999999999999999999999987533223333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccc-ccccccccCCCCCCCCcchHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT-DIELDEMLDPRLPAPSRSVQEKL 367 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 367 (397)
....||+.|+|||++.+..++.++|||||||++|||+||+.||+............ ......+.......+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~ 229 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR----SLS 229 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCC----CCC
Confidence 44678999999999999899999999999999999999999997432211000000 0011112222222222 123
Q ss_pred HHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 016009 368 RSIVEVVFSCLNESPESRPT------MKIVSQQ 394 (397)
Q Consensus 368 ~~l~~l~~~cl~~~P~~RPt------~~~vl~~ 394 (397)
..+.+++.+||+.||++||| +++++++
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 45788999999999999997 6777653
No 72
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-42 Score=311.51 Aligned_cols=252 Identities=27% Similarity=0.479 Sum_probs=202.7
Q ss_pred cCCCCCccccccCcEEEEEEEeCC----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
++|+..+.||+|+||.||+|.... ...|++|.+..... ......+..|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS---DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC---hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 568889999999999999997642 45799998864322 22356789999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+++|||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||++++++.++|+|||++..
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 81 MIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 99999999999999997644 3689999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CC
Q 016009 281 LKPDSSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RL 356 (397)
Q Consensus 281 ~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 356 (397)
........ ....++..|+|||...+..++.++||||||+++|||++ |..||....... ....+.+. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~ 227 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--------VIKAVEDGYRL 227 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--------HHHHHHcCCCC
Confidence 65222211 12234578999999998899999999999999999998 999985432110 01111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+.+ ...+..+.+++.+||+.+|++||++++|+++|+
T Consensus 228 ~~~----~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 228 PPP----MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred CCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 123456889999999999999999999999986
No 73
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.2e-42 Score=309.81 Aligned_cols=252 Identities=26% Similarity=0.383 Sum_probs=205.5
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||++... +++.|++|.+..... .......+.+|++++++++|||++++++++...+..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence 4677788999999999999654 689999999864221 2334678899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.... ...+++.+++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 79 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 79 EYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred EeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 9999999999997643 24689999999999999999999998 9999999999999999999999999998876544
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........+++.|+|||+..+..++.++|+||||++++||++|+.||....... ....+.....+... .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~---~ 223 (256)
T cd08529 155 TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--------LILKIIRGVFPPVS---Q 223 (256)
T ss_pred cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCCCCCc---c
Confidence 433344568889999999999889999999999999999999999986433210 01111111111111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 334568999999999999999999999875
No 74
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.2e-43 Score=312.37 Aligned_cols=252 Identities=27% Similarity=0.514 Sum_probs=204.1
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.++|+..+.||+|++|.||+|...+++.||+|.++... ...+++.+|++++++++|||++++++++...+..+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence 45688889999999999999988778899999986422 1256789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++.... ...+++.++..++.+++.|+.|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 80 TELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 99999999999997644 24689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCCC
Q 016009 284 DSSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD-PRLPAPS 360 (397)
Q Consensus 284 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 360 (397)
.... ......+..|+|||...+..++.++||||||+++|||+| |+.||....... ....+.. ...+.+
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~~- 226 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--------VLQQVDQGYRMPCP- 226 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCCCCCC-
Confidence 2211 111223457999999998899999999999999999999 999986432210 0000000 011111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
......+.+++.+|++.+|++||+++++++.||
T Consensus 227 ---~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 227 ---PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred ---CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 123356889999999999999999999999987
No 75
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.8e-43 Score=323.11 Aligned_cols=244 Identities=25% Similarity=0.358 Sum_probs=194.4
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||+|... +++.||+|++..... ......+.+..|..++..+ +||||+++++++...+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH-hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence 35999999999999764 688999999864211 1112345677888888877 69999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 80 GGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred CchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 999999886543 589999999999999999999998 99999999999999999999999999987643333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~ 221 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--------LFEAILNDEVVYPT----WLSQ 221 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--------HHHHHhcCCCCCCC----CCCH
Confidence 45678999999999998889999999999999999999999986433211 11111111111111 1234
Q ss_pred HHHHHHHHccCCCCCCCCCH------HHHHH
Q 016009 369 SIVEVVFSCLNESPESRPTM------KIVSQ 393 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~------~~vl~ 393 (397)
.+.+++.+|++.||++||++ +++++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~ 252 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLTLGGEEAILR 252 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCCCHHHHHc
Confidence 57899999999999999998 66654
No 76
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.2e-43 Score=317.88 Aligned_cols=255 Identities=22% Similarity=0.272 Sum_probs=200.5
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|+||.||++.. .+++.||+|++...... .......+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 367788999999999999965 47899999998642211 1122456788999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 80 TLMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred eccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999988864332 4589999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
. ......|+..|+|||.+.+..++.++||||+|+++|||++|+.||........ .......+.... .....
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~---~~~~~ 226 (285)
T cd05605 156 E-TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-----REEVERRVKEDQ---EEYSE 226 (285)
T ss_pred C-ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-----HHHHHHHhhhcc---cccCc
Confidence 2 22334689999999999988899999999999999999999999864321100 000111111111 11112
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
.....+.+++.+||+.||++|| ++++++++
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 3345688999999999999999 88898764
No 77
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=9.5e-43 Score=311.57 Aligned_cols=252 Identities=23% Similarity=0.442 Sum_probs=203.9
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.++|+..+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence 35788889999999999999988888899999876421 1357889999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++..... ..+++.+++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred EecCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 999999999999865432 4588999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCC
Q 016009 284 DSSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLPAPS 360 (397)
Q Consensus 284 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 360 (397)
.... .....++..|+|||+..+..++.++||||||+++|+|+| |+.||....... ....+... ..+..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~~- 226 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--------VMSALQRGYRMPRM- 226 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--------HHHHHHcCCCCCCC-
Confidence 2211 122345678999999988889999999999999999998 999985332110 00100000 11111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+|++.+|++|||++++.+.|+
T Consensus 227 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 227 ---ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred ---CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 122345889999999999999999999999986
No 78
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.2e-43 Score=323.19 Aligned_cols=245 Identities=25% Similarity=0.336 Sum_probs=195.7
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||+|... +++.||+|++..... ......+.+..|.+++..+ +||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI-LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence 35999999999999764 678999999864211 1122345677899998876 79999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+.+.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 80 GGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 999999886543 588999999999999999999998 99999999999999999999999999987644333334
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....|++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.......+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--------~~~~~i~~~~~~~p~~----~~~ 221 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--------DLFESILHDDVLYPVW----LSK 221 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCC----CCH
Confidence 4557899999999999889999999999999999999999998743321 1111111111111111 224
Q ss_pred HHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 016009 369 SIVEVVFSCLNESPESRP-------TMKIVSQQ 394 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RP-------t~~~vl~~ 394 (397)
.+.+++..||+.||++|| ++++++++
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 578899999999999999 78888754
No 79
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-44 Score=298.11 Aligned_cols=256 Identities=23% Similarity=0.387 Sum_probs=210.5
Q ss_pred hcCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchh----cHHHHHHHHHHHHhc-cCCceeeeEEEEecC
Q 016009 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV----DKKEFLTEVEALTEI-RHRNIVKLYGFCSHA 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 197 (397)
-+.|...+.||.|..++|-++ ..++|.++|+|++.......... -.+.-.+|+.+|+++ .||+|+.+.++++++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 346777888999999999888 45578999999986533322221 234557899999999 699999999999999
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...++|+|.|+.|.|.|+|...- .++++..++|+.|+.+|++|||.+ +||||||||+|||+|++.+++|+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 99999999999999999996543 599999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccC------CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYT------MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
++.+.++ ......+||++|+|||.+.. ..|+...|.|++|++||-|+.|.+||.--..+ ..+.-+
T Consensus 170 a~~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm--------lMLR~I 240 (411)
T KOG0599|consen 170 ACQLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM--------LMLRMI 240 (411)
T ss_pred eeccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH--------HHHHHH
Confidence 9988755 44567899999999998864 35788999999999999999999997521111 112233
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...........+.+......+||.+|++.||.+|.|++|++++
T Consensus 241 meGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 241 MEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 3334444445566777789999999999999999999999864
No 80
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.2e-42 Score=314.15 Aligned_cols=255 Identities=27% Similarity=0.471 Sum_probs=203.3
Q ss_pred cCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
++|...+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|+++++.++|+|++++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS---NDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC---HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 46777889999999999999653 347899999865322 123578999999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccc-----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAA-----------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE 267 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 267 (397)
..++||||+++++|.+++..... ...+++.++..++.|++.|++|||+. +++|+||||+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCC
Confidence 99999999999999999975421 23578999999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccc
Q 016009 268 FEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNT 344 (397)
Q Consensus 268 ~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~ 344 (397)
+.++|+|||++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~------ 232 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE------ 232 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------
Confidence 9999999999875432221 1123345778999999999999999999999999999998 999975432211
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 345 DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+......... ......+.+++.+||+.||++|||++||++.|+
T Consensus 233 --~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 233 --VIECITQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11111111111111 123355889999999999999999999999986
No 81
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.4e-42 Score=309.56 Aligned_cols=250 Identities=26% Similarity=0.474 Sum_probs=201.4
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
++|+..+.||+|+||.||+|...++..+|+|.+.... ...+++.+|+.++++++||||+++++++......+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-----ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 3577788899999999999988777789999876421 12467899999999999999999999999888999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||.+......
T Consensus 79 e~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 79 EYMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 9999999999986543 2589999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCC-CCCCCc
Q 016009 285 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPR-LPAPSR 361 (397)
Q Consensus 285 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 361 (397)
... .....++..|+|||...+..++.++||||||+++|||++ |+.||....... ....+.... ...+.
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~- 224 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--------TVEKVSQGLRLYRPH- 224 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHhcCCCCCCCC-
Confidence 211 112235678999999988889999999999999999999 999986433210 001111111 11111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+++.+||+.+|++|||+.++++.||
T Consensus 225 ---~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 ---LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 12356889999999999999999999999886
No 82
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.8e-43 Score=322.23 Aligned_cols=249 Identities=23% Similarity=0.311 Sum_probs=196.8
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCC-ceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR-NIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv 203 (397)
+|+..+.||+|+||.||+|... +++.||+|++..... ......+.+..|.+++..++|+ +|+.+++++...+..++|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 4777889999999999999654 678999999864221 1122356788899999999764 688899999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999999986543 488999999999999999999998 999999999999999999999999999875433
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+.......+.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~~~~~--- 222 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNVSYPK--- 222 (324)
T ss_pred CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCC---
Confidence 333334457899999999999989999999999999999999999998643221 011111111111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTM-----KIVSQ 393 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~-----~~vl~ 393 (397)
.....+.+++.+||+.||++||+. +++++
T Consensus 223 -~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 223 -SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 123457889999999999999976 56654
No 83
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.3e-42 Score=311.72 Aligned_cols=260 Identities=22% Similarity=0.328 Sum_probs=206.0
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||++.. .+++.++||.+..... .......++.+|+++++.++||||+++++++..++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh-hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 4677888999999999999964 5889999998764221 2223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|||+++++|.+++.... ....+++.+++.++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999886422 224589999999999999999999998 99999999999999999999999999987665
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
..........++..|+|||...+..++.++|+||||+++|+|++|..||.......... .........+..+
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~----- 229 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL---CKKIEQCDYPPLP----- 229 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH---hhhhhcCCCCCCC-----
Confidence 44333334568889999999988889999999999999999999999975322100000 0011111111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.......+.+++.+||+.||++|||+.+|++.++
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 1234456889999999999999999999988775
No 84
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-42 Score=319.75 Aligned_cols=200 Identities=26% Similarity=0.403 Sum_probs=173.3
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+..+.||+|+||.||++... ++..+|+|.+..... ......+.+|++++++++||||+++++++..++..++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 367889999999999999999765 688899998765321 2235678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+++|+|.+++.... .+++..+..++.+++.||.|||+.. +++|+||||+||+++.++.+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred EEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 999999999999996543 4889999999999999999999742 79999999999999999999999999987553
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDF 333 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~ 333 (397)
... .....|+..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 156 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 156 DSM--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred hhc--cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 221 1234688999999999988899999999999999999999999864
No 85
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-43 Score=326.97 Aligned_cols=255 Identities=22% Similarity=0.294 Sum_probs=197.7
Q ss_pred CCCCCccccccCcEEEEEEEe----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCee
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 200 (397)
+|+..+.||+|+||.||++.. .+++.||+|++............+.+..|+++++++ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477788999999999999864 368899999986422112222345678899999999 599999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999986543 489999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCC-CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 016009 281 LKPDSS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358 (397)
Q Consensus 281 ~~~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
...... ......||..|+|||.+.+. .++.++|||||||++|||+||+.||......... ......+.......
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----~~~~~~~~~~~~~~ 230 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ----SEVSRRILKCDPPF 230 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH----HHHHHHHhcCCCCC
Confidence 543322 22345789999999998765 4788999999999999999999998633211000 00001111111111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 359 PSRSVQEKLRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 359 ~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
+. .....+.+++.+||+.||++|| ++++++++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 231 PS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 11 1234578899999999999999 77788754
No 86
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.5e-43 Score=326.41 Aligned_cols=240 Identities=24% Similarity=0.308 Sum_probs=188.8
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHH-HHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVE-ALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||+||+|... +|+.||+|++....... ......+..|.. +++.++||||+++++++...+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 35999999999999664 78999999986421111 112344555554 5678899999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++.... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 80 GGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 999999986543 588999999999999999999998 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~ 221 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA--------EMYDNILNKPLRLKP----NISV 221 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCH
Confidence 4457899999999999989999999999999999999999998643211 011111111111111 1234
Q ss_pred HHHHHHHHccCCCCCCCCCHH
Q 016009 369 SIVEVVFSCLNESPESRPTMK 389 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~ 389 (397)
.+.+++.+|++.||++||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCC
Confidence 588999999999999999984
No 87
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7.2e-43 Score=321.91 Aligned_cols=244 Identities=23% Similarity=0.318 Sum_probs=195.0
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 203 (397)
+|...+.||+|+||.||+|... +++.||+|.+...... .....+.+..|..++..+ +|++|+.+++++...+..++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 4777889999999999999655 6789999998752211 112245567788888877 589999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+.+.... .+++.++..++.|++.||+|||+. +++||||||+|||+++++.+||+|||++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 80 MEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred EcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999999886543 488999999999999999999998 999999999999999999999999999875443
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+.......+.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--------~~~~~i~~~~~~~p~--- 222 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNVAYPK--- 222 (323)
T ss_pred CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC---
Confidence 333334567899999999999999999999999999999999999998643321 111112222222111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTM 388 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~ 388 (397)
.....+.+++.+|++.||++|++.
T Consensus 223 -~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 223 -SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -cCCHHHHHHHHHHcccCHHhcCCC
Confidence 223457889999999999999984
No 88
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.7e-43 Score=323.90 Aligned_cols=258 Identities=26% Similarity=0.401 Sum_probs=199.6
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEe
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCS 195 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 195 (397)
+.++|++.+.||+|+||.||+|... +++.||+|+++.... ....+.+..|+++++++ +|+||++++++|.
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---ASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC---HHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 3457888999999999999999532 357899999874322 12346688999999999 8999999999886
Q ss_pred c-CCeeeEEEEeccCCCHHHhhccccc-----------------------------------------------------
Q 016009 196 H-ARHSFLVYEFLKRGSLAAILSSDAA----------------------------------------------------- 221 (397)
Q Consensus 196 ~-~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------------- 221 (397)
. +...+++|||+++++|.+++.....
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 5 4568899999999999998854211
Q ss_pred -----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC--ccccccc
Q 016009 222 -----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGT 294 (397)
Q Consensus 222 -----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~ 294 (397)
..+++|.++..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..+...... .....++
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~ 238 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCC
Confidence 12689999999999999999999998 9999999999999999999999999999876433221 1233456
Q ss_pred ccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHH
Q 016009 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEV 373 (397)
Q Consensus 295 ~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 373 (397)
..|+|||++.+..++.++|||||||++|||++ |..||....... .....+...... .........+.++
T Consensus 239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~l 308 (337)
T cd05054 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--------EFCRRLKEGTRM--RAPEYATPEIYSI 308 (337)
T ss_pred ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--------HHHHHHhccCCC--CCCccCCHHHHHH
Confidence 78999999999999999999999999999998 999985322100 000011000000 0001233468899
Q ss_pred HHHccCCCCCCCCCHHHHHHHhc
Q 016009 374 VFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 374 ~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+.+||+.+|++||++.||+++|+
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILG 331 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999985
No 89
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-42 Score=310.46 Aligned_cols=254 Identities=26% Similarity=0.392 Sum_probs=201.5
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 4788899999999999999975 5788999999864221 2245678999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++.... .+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 85 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999999986543 589999999999999999999998 999999999999999999999999999986643
Q ss_pred CCCCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
.........++..|+|||.+. ...++.++||||||+++|||++|+.|+............. ......+...
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~--- 232 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS---KSNFQPPKLK--- 232 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee---cCCCCCCCCc---
Confidence 333233456888999999874 3457889999999999999999999975433211110000 0000111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
........+.+++.+||+.+|++|||++++++.|
T Consensus 233 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 233 -DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1112345688999999999999999999999865
No 90
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-43 Score=300.70 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=203.3
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe--cCCee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS--HARHS 200 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~ 200 (397)
.++|+..+.|++|+||.||+|+. ++++.||+|+++....... -.-.-++|+.+|.+++|||||.+..+.. +-+..
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G--FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG--FPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC--CcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 34677788999999999999965 5789999999986432221 1234589999999999999999998874 44679
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
|+|||||+. +|...+.... +++...++..++.|+++|++|||++ .|+|||||++|+|++..|.+||+|||+|+.
T Consensus 153 y~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred eeeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhh
Confidence 999999987 8999987655 5799999999999999999999999 999999999999999999999999999999
Q ss_pred cCCCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccc--------------cccccc
Q 016009 281 LKPDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--------------SFLNTD 345 (397)
Q Consensus 281 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--------------~~~~~~ 345 (397)
+.......+..+-|..|.|||.+.+. .|++..|+||+||++.||+++++-|...+...+ .+.. -
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg-~ 305 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG-Y 305 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC-c
Confidence 98777777888999999999998875 589999999999999999999988754433210 0000 0
Q ss_pred cccccccCCCCC-CCCcchH----H--HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 346 IELDEMLDPRLP-APSRSVQ----E--KLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 346 ~~~~~~~~~~~~-~~~~~~~----~--~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+..+-.-..+ .+..... . ....-++|+...+..||.+|.|++|.|++
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 000000000000 0000000 0 12456788889999999999999998864
No 91
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.3e-43 Score=322.21 Aligned_cols=243 Identities=26% Similarity=0.356 Sum_probs=190.9
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||+|... +++.||+|.++..... .....+.+..|..++... +||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 35999999999999764 6889999998642211 112244556677777655 89999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++.... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 80 GGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 999999986543 589999999999999999999998 99999999999999999999999999997654333334
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~ 221 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE--------LFDSILNDRPHFPR----WISK 221 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCCCCCC----CCCH
Confidence 45678999999999998899999999999999999999999986432210 01111111111111 1234
Q ss_pred HHHHHHHHccCCCCCCCCCHH-HHH
Q 016009 369 SIVEVVFSCLNESPESRPTMK-IVS 392 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~-~vl 392 (397)
.+.+++.+||+.||++||++. +++
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHH
Confidence 578899999999999999875 454
No 92
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.3e-43 Score=325.19 Aligned_cols=260 Identities=25% Similarity=0.405 Sum_probs=194.0
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC-----Ce
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA-----RH 199 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 199 (397)
+|+..+.||+|+||.||+|.. .+|+.||+|++..... .......+.+|++++++++||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE--HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc--cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence 467788999999999999965 4789999999864222 122345788999999999999999999988543 34
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++||||+. ++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++.
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 79 IYVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 799999995 68988886543 589999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCC---CcccccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------cccc--
Q 016009 280 FLKPDSS---NWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------LNTD-- 345 (397)
Q Consensus 280 ~~~~~~~---~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------~~~~-- 345 (397)
....... ......|+..|+|||++.+ ..++.++|||||||++|||+||+.||.......... ....
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 6432211 1234578999999998865 578999999999999999999999986432210000 0000
Q ss_pred ------cccccc---cCCCCCCC-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 346 ------IELDEM---LDPRLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 346 ------~~~~~~---~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...... +.+..+.+ ..........+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000 00000000 00001123457899999999999999999999864
No 93
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.2e-42 Score=315.75 Aligned_cols=261 Identities=21% Similarity=0.345 Sum_probs=194.1
Q ss_pred CCCCCccccccCcEEEEEEEe-C-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc---cCCceeeeEEEEe-----
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-P-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI---RHRNIVKLYGFCS----- 195 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~----- 195 (397)
+|+..+.||+|+||.||+|.. . +++.||+|.++...... .....+.+|+++++.+ +||||++++++|.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC--CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 688889999999999999965 3 46889999986533221 1234566777777766 6999999999985
Q ss_pred cCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 196 HARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 196 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
.....++||||++ ++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 3456899999996 589988865432 3589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc--cc-----cccccc
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS--FL-----NTDIEL 348 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~--~~-----~~~~~~ 348 (397)
|++...... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||......... .. ......
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 999765433 2233456899999999998888999999999999999999999998754321100 00 000000
Q ss_pred -------ccccCCCCCCCC-cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 -------DEMLDPRLPAPS-RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 -------~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+....+. ....+....+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000110000000 0001223457899999999999999999999864
No 94
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6.3e-43 Score=329.34 Aligned_cols=252 Identities=21% Similarity=0.288 Sum_probs=194.8
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.|+..+.||+|+||+||+|.. .+++.||+|++..... ........+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV-LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 577889999999999999954 5788999999864211 11123467889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 81 DYIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999986543 488899999999999999999998 9999999999999999999999999997543110
Q ss_pred CC-----------------------------------------------CcccccccccccCcccccCCCCCcchhhHHH
Q 016009 285 SS-----------------------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSF 317 (397)
Q Consensus 285 ~~-----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~ 317 (397)
.. ......||+.|+|||.+.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 0112468999999999998889999999999
Q ss_pred HHHHHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHH--ccCCCCCCCCCHHHHHH
Q 016009 318 GVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFS--CLNESPESRPTMKIVSQ 393 (397)
Q Consensus 318 G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~--cl~~~P~~RPt~~~vl~ 393 (397)
||++|||+||+.||....... ....+.+ .....+.. .....++.+++.+ |+..+|..||+++++++
T Consensus 235 G~il~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~~--~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTE--------TQLKVINWENTLHIPPQ--VKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHH--------HHHHHHccccccCCCCC--CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 999999999999986433211 0011111 01111110 0122346677766 66667777999999986
Q ss_pred H
Q 016009 394 Q 394 (397)
Q Consensus 394 ~ 394 (397)
+
T Consensus 305 h 305 (381)
T cd05626 305 H 305 (381)
T ss_pred C
Confidence 4
No 95
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5e-42 Score=307.84 Aligned_cols=260 Identities=22% Similarity=0.322 Sum_probs=207.1
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|... +|+.|++|.++.... ......+.+.+|++++++++|+|++++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM-MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 57888999999999999999765 899999998864221 2222356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|||+++++|.+++.... ....+++.+++.++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999986432 224589999999999999999999998 99999999999999999999999999987665
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
..........++..|+|||.+.+..++.++||||||+++|+|++|+.||.......... ...+.....+. ..
T Consensus 158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~~~~~~--~~ 229 (267)
T cd08224 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL------CKKIEKCDYPP--LP 229 (267)
T ss_pred CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH------HhhhhcCCCCC--CC
Confidence 43333344568889999999988889999999999999999999999975322100000 00000001110 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.......+.+++.+||+.+|++|||+.+|+++|+
T Consensus 230 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 230 ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 1133456889999999999999999999999885
No 96
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-43 Score=330.14 Aligned_cols=252 Identities=25% Similarity=0.356 Sum_probs=203.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||+|... +|+.||+|++...... .......+..|++++..++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 36888899999999999999765 7899999998642111 112356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 80 MEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999999765 3589999999999999999999998 999999999999999999999999999986554
Q ss_pred CC-----------------------------CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 016009 284 DS-----------------------------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFL 334 (397)
Q Consensus 284 ~~-----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~ 334 (397)
.. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 33 1223456899999999999999999999999999999999999998754
Q ss_pred ccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 016009 335 SSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT-MKIVSQQ 394 (397)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-~~~vl~~ 394 (397)
.... ....+.. .....+... .....+.+++..|++ ||.+||+ +++++++
T Consensus 234 ~~~~--------~~~~i~~~~~~~~~p~~~--~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQE--------TYNKIINWKESLRFPPDP--PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHHH--------HHHHHhccCCcccCCCCC--CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 3211 0111111 111111110 133458889999998 9999999 9999875
No 97
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-42 Score=319.48 Aligned_cols=250 Identities=24% Similarity=0.451 Sum_probs=198.4
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCC----EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
.+|+..+.||+|+||.||+|.+. ++. .||+|.++.... ....+++.+|+.+++.++||||++++|+|... .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~ 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNPHVCRLLGICLTS-T 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence 46888999999999999999753 343 489999864221 22356788999999999999999999999764 5
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++++||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++.
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred ceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccc
Confidence 679999999999999997643 3588999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC--C
Q 016009 280 FLKPDSSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD--P 354 (397)
Q Consensus 280 ~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 354 (397)
......... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||+...... ...+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---------~~~~~~~~~ 228 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---------ISSILEKGE 228 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHhCCC
Confidence 765433222 12234668999999999999999999999999999998 999986432211 011111 1
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+. .+...+.+++.+||+.+|++|||+.+++..|.
T Consensus 229 ~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 229 RLPQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111 12345889999999999999999999998764
No 98
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1e-42 Score=320.06 Aligned_cols=245 Identities=24% Similarity=0.318 Sum_probs=195.4
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||++... +++.||+|.++.... ........+..|.++++.+ +||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI-LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 35999999999999665 578999999864211 1112345677899999888 79999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++.... .+++.++..++.|++.||.|||+. +++||||||+||++++++.++|+|||++..........
T Consensus 80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 80 GGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 999999886543 589999999999999999999998 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....|+..|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......+. ....
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~ 221 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE--------LFQSILEDEVRYPR----WLSK 221 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH--------HHHHHHcCCCCCCC----cCCH
Confidence 44568999999999999999999999999999999999999986433211 01111111111111 1234
Q ss_pred HHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 016009 369 SIVEVVFSCLNESPESRPTM-----KIVSQQ 394 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~-----~~vl~~ 394 (397)
.+.+++.+||+.||++|||+ .+++++
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 58899999999999999999 887653
No 99
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-42 Score=334.86 Aligned_cols=251 Identities=20% Similarity=0.213 Sum_probs=199.6
Q ss_pred CCCCCccccccCcEEEEEEEeC-C-CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-S-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.|...+.||+|++|.||+|... + ++.||+|.+... .......+..|+.+++.++||||+++++++..++..++|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN----DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 3778889999999999999543 4 678888876431 122345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|||+++|+|.+++.... ...++++.++..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 99999999999886432 234688999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 283 PDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 283 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.........
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--------~~~~~~~~~~~~~~~ 292 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR--------EIMQQVLYGKYDPFP 292 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC
Confidence 3322 123456899999999999989999999999999999999999998643221 011111111111101
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.||++||++++++..
T Consensus 293 ---~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 293 ---CPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ---ccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 1223458899999999999999999999753
No 100
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-45 Score=306.81 Aligned_cols=248 Identities=28% Similarity=0.450 Sum_probs=216.9
Q ss_pred CCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|.+..+||+|+||.||++. ..+|+.+|+|++... .+.+++..|+.++++++.|++|+++|.|.....+|+|||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 5567789999999999994 458999999997642 247889999999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
||..|+..+.++.++ +++++.++..++...++||+|||.. .-+|||||+.|||++.+|.+||+|||.+.++...-
T Consensus 109 YCGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 109 YCGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hcCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 999999999997665 5799999999999999999999998 88999999999999999999999999999887666
Q ss_pred CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 286 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
....+..||+-|||||++..-.|+.++||||+|+...||..|++||.+..++..-+.. ....++....+.+
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI---------PT~PPPTF~KPE~ 254 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI---------PTKPPPTFKKPEE 254 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec---------cCCCCCCCCChHh
Confidence 6667789999999999999999999999999999999999999999877665433322 1222333445567
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 366 KLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
++.++.+++..|+.++|++|-|+.+++++
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 88899999999999999999999998875
No 101
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=8.9e-43 Score=326.32 Aligned_cols=203 Identities=27% Similarity=0.356 Sum_probs=173.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||+||++... +++.||+|++..... ........+..|+.++.+++|+||+++++.+.+....++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 47888999999999999999654 689999999864211 1122345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 80 MEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred EcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999997543 589999999999999999999998 999999999999999999999999999875432
Q ss_pred CCC-----------------------------------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCC
Q 016009 284 DSS-----------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328 (397)
Q Consensus 284 ~~~-----------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~ 328 (397)
... .....+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 012347899999999999989999999999999999999999
Q ss_pred CCCCcc
Q 016009 329 HPRDFL 334 (397)
Q Consensus 329 ~p~~~~ 334 (397)
.||...
T Consensus 234 ~Pf~~~ 239 (363)
T cd05628 234 PPFCSE 239 (363)
T ss_pred CCCCCC
Confidence 998643
No 102
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-42 Score=308.66 Aligned_cols=256 Identities=27% Similarity=0.461 Sum_probs=197.8
Q ss_pred CCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc--cCCceeeeEEEEecCC----ee
Q 016009 127 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNIVKLYGFCSHAR----HS 200 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~----~~ 200 (397)
....+++|+|.||.||||.+. ++.||||++.. .+++.|.+|-+|.+.. +|+||++++++-.... +.
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~-------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE-------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCH-------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 344567999999999999984 58999999863 3578899999988865 8999999999876655 88
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCceeccCCCCcEEeCCCCcEEEee
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDC------FPPIVHRDISSKNLLLDLEFEAHVAD 274 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------~~~ivH~dlk~~Nill~~~~~~kl~D 274 (397)
+||+||.+.|+|.++|..+. ++|....+++..+++||+|||+.. .++|+|||||++|||+..|+++.|+|
T Consensus 284 wLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 99999999999999997654 899999999999999999999864 36899999999999999999999999
Q ss_pred eccccccCCCCC--CcccccccccccCcccccCCC-CC-----cchhhHHHHHHHHHHHhCCCCCC--cccccccc----
Q 016009 275 FGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMK-IT-----EKCDVYSFGVLALEVIKGKHPRD--FLSSISSS---- 340 (397)
Q Consensus 275 fg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~-~~-----~~~Dv~s~G~~l~el~tg~~p~~--~~~~~~~~---- 340 (397)
||+|..+.+... .....+||.+|||||++.+.- +. .+.||||+|.+||||++.....+ ........
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 999998775433 234478999999999987642 22 37899999999999998654432 11111100
Q ss_pred --cccccc-----ccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 341 --FLNTDI-----ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 341 --~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
....-+ .+.+...|.++..+... ..+..+.+.+..||+.||+.|.|+.-|-+++
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 000001 12222334443322222 4467799999999999999999999887765
No 103
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.2e-43 Score=329.79 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=198.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||+||++... +|+.||||++..... ........+.+|+++++.++||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM-LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 47888999999999999999654 689999999864211 1112345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||++.++.++|+|||++..+..
T Consensus 80 ~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 80 MEYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred ECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999987543 489999999999999999999998 999999999999999999999999999875432
Q ss_pred CCC--------------------------------------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHH
Q 016009 284 DSS--------------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 325 (397)
Q Consensus 284 ~~~--------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~ 325 (397)
... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 110 001235899999999999989999999999999999999
Q ss_pred hCCCCCCccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 016009 326 KGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT---MKIVSQQ 394 (397)
Q Consensus 326 tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~~vl~~ 394 (397)
+|..||........ ...+.+ ..+..+.. ......+.+++.+|+. +|.+|++ +++++++
T Consensus 234 ~G~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 234 VGYPPFCSDNPQET--------YRKIINWKETLQFPDE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred cCCCCCCCCCHHHH--------HHHHHcCCCccCCCCC--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99999864432110 011110 11111111 0123357788889986 9999998 8888764
No 104
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.1e-42 Score=309.76 Aligned_cols=252 Identities=25% Similarity=0.434 Sum_probs=201.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.+|...+.||+|++|.||+|... +++.|++|.+... .....++.+|++++++++|||++++++++...+..+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 35777888999999999999654 6889999997642 12356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 81 TEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred EEeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 999999999999865432 4589999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCCc-ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 284 DSSNW-TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 284 ~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
..... .....+..|+|||...+..++.++||||||+++|||++ |..|+........ . ........+ ..+
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~----~~~~~~~~~--~~~-- 227 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-Y----ELLEKGYRM--ERP-- 227 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-H----HHHHCCCCC--CCC--
Confidence 22111 11234568999999998899999999999999999998 8999753221100 0 000000111 111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+||+.||++|||+.+++++|+
T Consensus 228 --~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 228 --EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred --CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 122356889999999999999999999999986
No 105
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.9e-43 Score=329.88 Aligned_cols=254 Identities=23% Similarity=0.320 Sum_probs=200.0
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
..++|+..+.||+|+||.||++... +++.||+|.+..... ........+..|+.+++.++||||+++++++.+++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM-IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3567888999999999999999654 688999999853111 11123455788999999999999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999998643 478888999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCC-CcccccccccccCcccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC-
Q 016009 282 KPDSS-NWTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPR- 355 (397)
Q Consensus 282 ~~~~~-~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 355 (397)
..... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||....... ....+.+..
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--------~~~~i~~~~~ 264 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKIMDHKN 264 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH--------HHHHHHcCCC
Confidence 43322 22345799999999988653 47889999999999999999999986433210 111111111
Q ss_pred -CCCCCcchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 016009 356 -LPAPSRSVQEKLRSIVEVVFSCLNESPES--RPTMKIVSQQ 394 (397)
Q Consensus 356 -~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~~vl~~ 394 (397)
+..+. .......+.+++.+|++.+|++ |||+++++++
T Consensus 265 ~~~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 SLTFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred cCCCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11111 0122345888999999999998 9999999865
No 106
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-42 Score=324.69 Aligned_cols=253 Identities=21% Similarity=0.298 Sum_probs=195.5
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||++.. .+++.||+|... .+.+.+|++++++++||||+++++++......++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 5799999999999999999954 578999999743 24567899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+|++. ++|..++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 162 ~e~~~-~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 162 LPRYK-TDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred EecCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 99985 6888887654 3588999999999999999999998 999999999999999999999999999975432
Q ss_pred C-CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc--------------------ccc
Q 016009 284 D-SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--------------------SFL 342 (397)
Q Consensus 284 ~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--------------------~~~ 342 (397)
. ........||+.|+|||++.+..++.++|||||||++|||+||+.|+-....... .+.
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 2 1222345799999999999998999999999999999999999987532111000 000
Q ss_pred c-ccccccccc---------CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 343 N-TDIELDEML---------DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 343 ~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. ......... .+..........+....+.+++.+||+.||++|||++|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 000000000 000000011112334578899999999999999999999864
No 107
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-42 Score=312.81 Aligned_cols=253 Identities=24% Similarity=0.423 Sum_probs=200.3
Q ss_pred cCCCCCccccccCcEEEEEEEe-----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
++|+..+.||+|+||.||+|.. .++..+++|.+..... ......+.+|++++++++||||+++++++..+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 4677788999999999999963 3567899999874222 2234678899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHhhccccc--------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC
Q 016009 200 SFLVYEFLKRGSLAAILSSDAA--------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 265 (397)
.++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. +++|+||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIG 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEc
Confidence 9999999999999999853221 13478999999999999999999998 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccc
Q 016009 266 LEFEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342 (397)
Q Consensus 266 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~ 342 (397)
+++.+||+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~----- 233 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ----- 233 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 999999999999976543221 1223345678999999988889999999999999999998 99887532211
Q ss_pred ccccccccccCCC--CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 343 NTDIELDEMLDPR--LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 343 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+.++.. .+.+. .....+.+++.+||+.||++||++.+|+++|.
T Consensus 234 ----~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 234 ----EVIEMVRKRQLLPCSE----DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred ----HHHHHHHcCCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 011111111 11111 22345888999999999999999999999885
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.6e-43 Score=323.26 Aligned_cols=240 Identities=26% Similarity=0.355 Sum_probs=192.8
Q ss_pred ccccccCcEEEEEEEe----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 131 YCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
+.||+|+||.||++.. .+|+.||+|++..... .......+..|++++++++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 5699999999999854 3688999999864211 112345677899999999999999999999999999999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++........
T Consensus 80 ~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 80 LRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 99999999986543 589999999999999999999998 999999999999999999999999999886544433
Q ss_pred CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHH
Q 016009 287 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366 (397)
Q Consensus 287 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+.......+. ..
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--------~~~~i~~~~~~~p~----~~ 221 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE--------TMTMILKAKLGMPQ----FL 221 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH--------HHHHHHcCCCCCCC----CC
Confidence 3344678999999999998889999999999999999999999986432211 11111111111111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHH
Q 016009 367 LRSIVEVVFSCLNESPESRPTMKI 390 (397)
Q Consensus 367 ~~~l~~l~~~cl~~~P~~RPt~~~ 390 (397)
...+.+++.+||+.||++||++.+
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 345788999999999999999443
No 109
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.9e-42 Score=312.12 Aligned_cols=254 Identities=26% Similarity=0.462 Sum_probs=200.6
Q ss_pred cCCCCCccccccCcEEEEEEEe------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
++|.+.+.||+|+||.||++.. .++..+|+|.+... .....+.+.+|++++++++|||++++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 4678889999999999999964 23456899987642 1223567899999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccc----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAA----------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF 268 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 268 (397)
..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. +++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 99999999999999999864321 13489999999999999999999998 999999999999999999
Q ss_pred cEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccc
Q 016009 269 EAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTD 345 (397)
Q Consensus 269 ~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~ 345 (397)
.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||+| |..||.......
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~------- 230 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------- 230 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 999999999876543221 1122345678999999998889999999999999999998 899976432210
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 346 IELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+.......... .....+.+++.+||+.||.+|||++++++.|+
T Consensus 231 -~~~~i~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 231 -VIECITQGRVLQRPR---TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred -HHHHHHcCCcCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 011111111111011 12345899999999999999999999998875
No 110
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4e-42 Score=305.92 Aligned_cols=247 Identities=25% Similarity=0.424 Sum_probs=195.5
Q ss_pred cccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCC
Q 016009 132 CIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRG 210 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 210 (397)
.||+|+||.||+|.. .+++.+|+|.+..... ......+.+|++++++++||||+++++++......++||||++++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLP---PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 599999999999965 4789999998764221 223567899999999999999999999999999999999999999
Q ss_pred CHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc--
Q 016009 211 SLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW-- 288 (397)
Q Consensus 211 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-- 288 (397)
+|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++..........
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999986543 3589999999999999999999998 99999999999999999999999999987543221111
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcchHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKL 367 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (397)
.....+..|+|||.+.++.++.++||||||+++|||++ |..|+....... ....+...... ......+
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---------~~~~~~~~~~~--~~~~~~~ 222 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---------TREAIEQGVRL--PCPELCP 222 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---------HHHHHHcCCCC--CCcccCC
Confidence 11123457999999998889999999999999999998 888876433211 01111111110 0011224
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 016009 368 RSIVEVVFSCLNESPESRPTMKIVSQQLQI 397 (397)
Q Consensus 368 ~~l~~l~~~cl~~~P~~RPt~~~vl~~Le~ 397 (397)
..+.+++.+|++.+|++|||+.+|+++|+.
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 568899999999999999999999999873
No 111
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.2e-43 Score=320.24 Aligned_cols=242 Identities=27% Similarity=0.374 Sum_probs=191.5
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||+|... +++.||+|.++..... .......+..|..++... +||||+++++++.+.+..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 35999999999999764 5789999998642211 111235567788888765 89999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++... ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 80 GGDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 99999998653 3588999999999999999999998 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccc--cCCCCCCCCcchHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM--LDPRLPAPSRSVQEK 366 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 366 (397)
....||..|+|||++.+..++.++|||||||++|||++|+.||....... ....+ ..+..+ . ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--------~~~~i~~~~~~~~--~----~~ 219 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--------LFQSIRMDNPCYP--R----WL 219 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCCCC--c----cC
Confidence 44578999999999998899999999999999999999999986432110 00111 111111 1 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 016009 367 LRSIVEVVFSCLNESPESRPTMK-IVSQ 393 (397)
Q Consensus 367 ~~~l~~l~~~cl~~~P~~RPt~~-~vl~ 393 (397)
...+.+++.+||+.||++||++. ++.+
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 220 TREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 34578899999999999999997 5543
No 112
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.4e-43 Score=321.06 Aligned_cols=243 Identities=24% Similarity=0.316 Sum_probs=191.6
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||+|... +|+.||+|.++..... .......+..|..++... +||||+++++++...+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence 35999999999999765 6889999998642211 112245567788888765 89999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++..........
T Consensus 80 ~g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 80 GGDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 99999988654 3588999999999999999999998 99999999999999999999999999987543333334
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....||..|+|||++.+..++.++||||||+++|||++|+.||...... .....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~ 221 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDTPHYPR----WITK 221 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC----CCCH
Confidence 4567899999999999999999999999999999999999998643221 001111111111111 1234
Q ss_pred HHHHHHHHccCCCCCCCCCHH-HHH
Q 016009 369 SIVEVVFSCLNESPESRPTMK-IVS 392 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~-~vl 392 (397)
.+.+++.+||+.||++||++. +++
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHH
Confidence 578899999999999999985 555
No 113
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.5e-42 Score=311.43 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=193.0
Q ss_pred ccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||+|+||.||++..+ +|+.||+|.+...... .......+..|++++++++||||+++.+++..+...++||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLK-KKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhh-cchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 699999999999654 6899999998642211 11123456679999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccc
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 291 (397)
|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++....... .....
T Consensus 80 L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~ 154 (277)
T cd05607 80 LKYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQR 154 (277)
T ss_pred HHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeecc
Confidence 9988864432 3588999999999999999999998 99999999999999999999999999987654322 22335
Q ss_pred cccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHH
Q 016009 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371 (397)
Q Consensus 292 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (397)
.|+..|+|||++.+..++.++||||+||++|||++|+.||........ ................. ......+.
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~ 227 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA----KEELKRRTLEDEVKFEH---QNFTEESK 227 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh----HHHHHHHhhcccccccc---ccCCHHHH
Confidence 688999999999988899999999999999999999999863221000 00001111111111111 12344588
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 016009 372 EVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 372 ~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
+++.+||+.||++||+++|+++
T Consensus 228 ~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 228 DICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHHhccCHhhCCCCccchh
Confidence 9999999999999999976554
No 114
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.8e-43 Score=324.98 Aligned_cols=241 Identities=24% Similarity=0.317 Sum_probs=189.3
Q ss_pred ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHH-HHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVE-ALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||++.. .+|+.+|+|++...... .......+..|.. +++.++||||+++++++..++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence 3599999999999965 47899999998642111 1122345556655 4677899999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|..++... ..+++.++..++.||+.||+|||+. +++||||||+||++++++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 80 GGELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 99999888654 3589999999999999999999998 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....|++.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--------~~~~~~~~~~~~~~----~~~~ 221 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE--------MYDNILHKPLVLRP----GASL 221 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH--------HHHHHHcCCccCCC----CCCH
Confidence 45678999999999999999999999999999999999999986432110 01111111111111 1234
Q ss_pred HHHHHHHHccCCCCCCCCCHHH
Q 016009 369 SIVEVVFSCLNESPESRPTMKI 390 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~~ 390 (397)
.+.+++.+|++.+|++||++++
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCC
Confidence 5778999999999999998863
No 115
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5e-42 Score=306.02 Aligned_cols=250 Identities=27% Similarity=0.471 Sum_probs=200.2
Q ss_pred CCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
+|+..+.||+|+||.||++..+++..+|+|.+.... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-----MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 577888999999999999988777889999876421 124578899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++++|.+++.... ..+++..++.++.|++.|++|||+. +++|+||||+||++++++.+||+|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 80 YMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred cCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 999999999987543 2589999999999999999999998 99999999999999999999999999987654221
Q ss_pred CC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 286 SN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 286 ~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.. .....++..|+|||...+..++.++||||||+++|||++ |+.||+........ ......... ..+.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~--~~~~--- 224 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----ESVSAGYRL--YRPK--- 224 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----HHHHcCCcC--CCCC---
Confidence 11 111223457999999998899999999999999999999 89998643221100 001111111 1111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 225 -~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 225 -LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred -CCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 23446889999999999999999999999873
No 116
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.1e-42 Score=311.80 Aligned_cols=254 Identities=27% Similarity=0.500 Sum_probs=201.4
Q ss_pred cCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
.+|...+.||+|+||.||++... ++..+++|.+... .....+.+.+|++++++++|+||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 35777888999999999999632 3556889987642 2223467899999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 265 (397)
..++||||+++++|.+++..... ...+++.+++.++.|++.|++|||++ +++|+||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 99999999999999999965431 23489999999999999999999998 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccc
Q 016009 266 LEFEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342 (397)
Q Consensus 266 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~ 342 (397)
.++.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 233 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---- 233 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----
Confidence 999999999999976543221 1223456788999999998899999999999999999999 999976433211
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+......... ...+..+.+++.+||+.+|++|||+++|+++|+
T Consensus 234 ----~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 234 ----VIECITQGRVLERP---RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred ----HHHHHhCCCCCCCC---ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 01111111111111 122345889999999999999999999999885
No 117
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4e-43 Score=323.93 Aligned_cols=241 Identities=23% Similarity=0.293 Sum_probs=187.9
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHH-HHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEV-EALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||+||++... +++.||+|++........ .....+..|. .+++.++||||+++++++...+..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK-KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh-hHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 35999999999999655 678899999864211111 1123444444 45678899999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++.... .+++.....++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 80 GGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 999999986543 478888999999999999999998 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~ 221 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--------MYDNILNKPLQLKP----NITN 221 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH--------HHHHHHhCCcCCCC----CCCH
Confidence 45679999999999999999999999999999999999999986432211 01111111111111 2234
Q ss_pred HHHHHHHHccCCCCCCCCCHHH
Q 016009 369 SIVEVVFSCLNESPESRPTMKI 390 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~~ 390 (397)
.+.+++.+|++.||.+||++.+
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred HHHHHHHHHcccCHHHCCCCCC
Confidence 5888999999999999998774
No 118
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.6e-42 Score=310.62 Aligned_cols=254 Identities=27% Similarity=0.428 Sum_probs=200.1
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecC--
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHA-- 197 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-- 197 (397)
.+++.|+..+.||+|+||.||+|... +++.||+|.+.... .....+..|+.+++++ +|+|++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 77 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence 45677888899999999999999654 68899999986421 2246788999999998 799999999998653
Q ss_pred ----CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEe
Q 016009 198 ----RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVA 273 (397)
Q Consensus 198 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 273 (397)
...+++|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 78 PGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CCCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEc
Confidence 457899999999999999876432 4589999999999999999999998 99999999999999999999999
Q ss_pred eeccccccCCCCCCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 016009 274 DFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIEL 348 (397)
Q Consensus 274 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 348 (397)
|||++..............|+..|+|||++. ...++.++|||||||++|||++|+.||............
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~----- 228 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----- 228 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH-----
Confidence 9999986544333334457889999999876 335788999999999999999999998644322111100
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+... .......+.+++.+||+.||++|||+.+++++
T Consensus 229 ~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 PRNPAPRLK-----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred hcCCCCCCC-----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000001111 01223458899999999999999999999864
No 119
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7.6e-42 Score=304.72 Aligned_cols=250 Identities=30% Similarity=0.459 Sum_probs=204.4
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|... +++.+++|.+.... ..+++.+|++++++++|||++++++++......+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE------DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 57888999999999999999765 47899999986421 157899999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 77 MEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred EecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999986533 4689999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........++..|+|||++.+..++.++||||||+++|+|++|+.|+........... ......+.. ...
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~----~~~ 222 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-----IPNKPPPTL----SDP 222 (256)
T ss_pred CccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-----hccCCCCCC----Cch
Confidence 43333445678899999999988899999999999999999999999874332111000 000001111 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.||++|||++||+++
T Consensus 223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 2234568899999999999999999999864
No 120
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.2e-43 Score=326.46 Aligned_cols=255 Identities=22% Similarity=0.317 Sum_probs=198.7
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
...++|+..+.||+|+||.||++... +++.+|+|.+..... ......+.+.+|+.+++.++||||+++++++.+++..
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 34568999999999999999999765 688999999853111 1112345678999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++..
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 9999999999999998643 478899999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCC-CcccccccccccCcccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 016009 281 LKPDSS-NWTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPR 355 (397)
Q Consensus 281 ~~~~~~-~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ....+.+..
T Consensus 192 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~--------~~~~i~~~~ 263 (370)
T cd05621 192 MDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG--------TYSKIMDHK 263 (370)
T ss_pred cccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCC
Confidence 643222 22345799999999998754 37889999999999999999999986433211 111122111
Q ss_pred --CCCCCcchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 016009 356 --LPAPSRSVQEKLRSIVEVVFSCLNESPES--RPTMKIVSQQ 394 (397)
Q Consensus 356 --~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~~vl~~ 394 (397)
+..+. .......+.+++..|++.+|.+ |||+.|++++
T Consensus 264 ~~~~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 NSLNFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cccCCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11111 1122345778888999865544 8999999875
No 121
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-42 Score=335.51 Aligned_cols=256 Identities=25% Similarity=0.293 Sum_probs=201.7
Q ss_pred HhcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC---
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR--- 198 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--- 198 (397)
..++|.+.+.||+|+||+||++. ..+|+.||||.+..... .......+.+|+..+..++|+|++++.+.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34689999999999999999995 45799999999865322 2234567889999999999999999988764332
Q ss_pred -----eeeEEEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEE
Q 016009 199 -----HSFLVYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 199 -----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
..++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 3689999999999999986532 234689999999999999999999998 9999999999999999999999
Q ss_pred eeeccccccCCCC--CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 016009 273 ADFGIAKFLKPDS--SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDE 350 (397)
Q Consensus 273 ~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 350 (397)
+|||+++.+.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~--------~~~~ 256 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE--------VMHK 256 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--------HHHH
Confidence 9999998654321 12234578999999999999999999999999999999999999986432110 0111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......... ......+.+++.+||+.||++||++.+++++
T Consensus 257 ~~~~~~~~~~---~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAGRYDPLP---PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcCCCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111000 1223458899999999999999999999864
No 122
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.8e-42 Score=307.51 Aligned_cols=252 Identities=23% Similarity=0.455 Sum_probs=202.1
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.++|...++||+|+||.||+|..++++.||+|.+.... ....++.+|++++++++|+|++++++++. .+..+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-----MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-----CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 35688889999999999999998889999999986422 23567899999999999999999999874 4578999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 79 TEYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999999865443 4689999999999999999999998 999999999999999999999999999976553
Q ss_pred CCC-CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 284 DSS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 284 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
... ......++..|+|||++.+..++.++||||||+++||+++ |+.||........ . ...... ...+.+.
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~---~~~~~~--~~~~~~~- 226 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV--I---QNLERG--YRMPRPD- 226 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH--H---HHHHcC--CCCCCCC-
Confidence 221 1222345678999999988889999999999999999999 9999864332100 0 000000 0111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+..+.+++.+|++.+|++|||++++++.|+
T Consensus 227 ---~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 227 ---NCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred ---CCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 12345899999999999999999999999986
No 123
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.5e-42 Score=298.55 Aligned_cols=264 Identities=24% Similarity=0.315 Sum_probs=202.6
Q ss_pred cCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc-eeeeEEEEecCC----
Q 016009 125 NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN-IVKLYGFCSHAR---- 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~---- 198 (397)
..|...+.||+|+||+||+|+ ..+|+.||+|+++..... ........+|+.+|++++|+| |+++.+++.+.+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 345566779999999999995 457899999999864332 112455689999999999999 999999998877
Q ss_pred --eeeEEEEeccCCCHHHhhcccccc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 199 --HSFLVYEFLKRGSLAAILSSDAAA-QELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 199 --~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
..++|+||++. +|.+++...... +.++...+..++.|+++||+|||++ +|+||||||+||+++++|.+||+||
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 78999999965 999998765532 3466688999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccc----------ccccc
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISS----------SFLNT 344 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~----------~~~~~ 344 (397)
|+|+...-.....+..++|..|.|||++.+. .|+...||||+||++.||++++.-|........ .....
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 9999766555556777899999999999877 699999999999999999999888765443210 00000
Q ss_pred ccccccccCCC--CCC---CCcchHHH---HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 345 DIELDEMLDPR--LPA---PSRSVQEK---LRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 345 ~~~~~~~~~~~--~~~---~~~~~~~~---~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
........+-. .+. +....... .....+++.+|++.+|.+|.|++.++.+
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00111111111 110 11111111 1367899999999999999999999875
No 124
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-42 Score=315.06 Aligned_cols=254 Identities=26% Similarity=0.363 Sum_probs=215.2
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 201 (397)
...|+..+.||+|.||.||++..+ +|+.+|+|.+........ .....+.+|+++|+++. |||||.+.+.+++....+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-EDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-ccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 346777789999999999999765 599999999976433221 24578999999999998 999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC----CcEEEeeecc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE----FEAHVADFGI 277 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~ 277 (397)
+|||++.||.|.+.+... .+++.....++.|++.++.|||+. +++||||||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999765 289999999999999999999998 99999999999999543 5799999999
Q ss_pred ccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
+..... .......+||+.|+|||++....|+..+||||+|+++|.|++|..||...... .....+....+.
T Consensus 186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~--------~~~~~i~~~~~~ 256 (382)
T KOG0032|consen 186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF--------EIFLAILRGDFD 256 (382)
T ss_pred ceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh--------HHHHHHHcCCCC
Confidence 998876 55667789999999999999999999999999999999999999998754431 112233333334
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+........+++..++..||.+|+|+.+++++
T Consensus 257 f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 257 FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 3444555667778999999999999999999999975
No 125
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.1e-43 Score=328.37 Aligned_cols=252 Identities=21% Similarity=0.297 Sum_probs=195.5
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||++.. .+++.||+|++..... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 3688889999999999999964 5789999999854111 1112345688899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 80 ~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 80 MEFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999998654 3588999999999999999999998 999999999999999999999999999863321
Q ss_pred CCC-----------------------------------------------CcccccccccccCcccccCCCCCcchhhHH
Q 016009 284 DSS-----------------------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYS 316 (397)
Q Consensus 284 ~~~-----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s 316 (397)
... ......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 000 001246899999999999889999999999
Q ss_pred HHHHHHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHccCCCCCCC---CCHHHH
Q 016009 317 FGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESR---PTMKIV 391 (397)
Q Consensus 317 ~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---Pt~~~v 391 (397)
|||++|||+||+.||........ ...+.. ..+..+.. ......+.+++.+|+. +|.+| +|+.|+
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~p~~--~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHET--------YRKIINWRETLYFPDD--IHLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHHH--------HHHHHccCCccCCCCC--CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 99999999999999864332110 011110 01111110 0123457888999997 67765 599998
Q ss_pred HHH
Q 016009 392 SQQ 394 (397)
Q Consensus 392 l~~ 394 (397)
+++
T Consensus 303 l~h 305 (377)
T cd05629 303 KSH 305 (377)
T ss_pred hcC
Confidence 875
No 126
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.7e-43 Score=322.37 Aligned_cols=240 Identities=23% Similarity=0.316 Sum_probs=187.5
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHH-HHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVE-ALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||+|... +++.||+|++....... ......+..|.. +++.++||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK-KKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 35999999999999764 68899999986421111 112344555554 6788999999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|...+... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 80 GGELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 99999888643 3588899999999999999999998 99999999999999999999999999987543323333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~ 221 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS--------QMYDNILHKPLQLPG----GKTV 221 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCH
Confidence 4457899999999999888999999999999999999999998643211 011112222222121 2234
Q ss_pred HHHHHHHHccCCCCCCCCCHH
Q 016009 369 SIVEVVFSCLNESPESRPTMK 389 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~ 389 (397)
.+.+++.+|++.||.+||+..
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCC
Confidence 588999999999999999753
No 127
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.7e-42 Score=305.52 Aligned_cols=250 Identities=27% Similarity=0.490 Sum_probs=201.2
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
++|++.+.||+|+||.||+|..+++..+|+|.+..... ..+.+.+|+.++++++|+|++++++++. ....+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence 46788899999999999999888888999999865221 2467899999999999999999999885 45689999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++..... ..+++.+++.++.+++.||+|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 80 EYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999999875432 4589999999999999999999998 9999999999999999999999999999765433
Q ss_pred CCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCc
Q 016009 285 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLPAPSR 361 (397)
Q Consensus 285 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 361 (397)
... .....++..|+|||...+..++.++||||||+++|||++ |..||....... ....+... ..+.+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~-- 225 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--------VLEQVERGYRMPCP-- 225 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCCCCCC--
Confidence 211 122234568999999988889999999999999999999 889986432210 01111110 11111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+....+.+++.+|++.+|++|||+.++++.|+
T Consensus 226 --~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 226 --QDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred --CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 123456889999999999999999999999886
No 128
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-42 Score=311.00 Aligned_cols=250 Identities=25% Similarity=0.402 Sum_probs=202.1
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.+|+..+.||+|++|.||+|.. .+++.|++|.+..... ...+.+.+|+.+++.++|+|++++++++..+...++|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc----chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 4678888999999999999964 5789999999864222 2356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++... .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred ecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999998542 478999999999999999999998 999999999999999999999999999876554
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........+++.|+|||.+.+..++.++||||||+++|+|++|+.||.......... ......... ....
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~-------~~~~~~~~~--~~~~ 239 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-------LIATNGTPE--LQNP 239 (296)
T ss_pred cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH-------HHhcCCCCC--CCCc
Confidence 3333344578899999999988889999999999999999999999986433211100 000011000 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.+|++|||+.++++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 2334558899999999999999999999874
No 129
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.1e-42 Score=317.52 Aligned_cols=244 Identities=23% Similarity=0.319 Sum_probs=193.6
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 203 (397)
+|+..+.||+|+||.||++.. .+|+.||+|++..... ......+.+..|..+++.+. |++|+++.+++...+..++|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 366778999999999999965 4789999999864211 11123456778999998885 57788899999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 80 MEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999986543 589999999999999999999998 999999999999999999999999999875443
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+.......+.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~~~p~--- 222 (323)
T cd05615 154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNVSYPK--- 222 (323)
T ss_pred CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCc---
Confidence 333334456899999999999888999999999999999999999998643321 111112222221111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTM 388 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~ 388 (397)
.....+.+++.+|++.+|.+|++.
T Consensus 223 -~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 223 -SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -cCCHHHHHHHHHHcccCHhhCCCC
Confidence 223457889999999999999974
No 130
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4e-42 Score=317.29 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=191.8
Q ss_pred ccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||++... +++.||+|++..... ......+.+..|..++.++ +||||+++++++...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV-HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 35999999999999654 678999999875321 1122345688999999988 69999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|..++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 80 GGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 999998886543 589999999999999999999998 99999999999999999999999999987543333333
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....||+.|+|||++.+..++.++||||||+++|||++|+.||+......... ........+.......+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~p~----~~~~ 228 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-TEDYLFQVILEKPIRIPR----FLSV 228 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-cHHHHHHHHHhCCCCCCC----CCCH
Confidence 45678999999999999999999999999999999999999986432111000 000011111122222111 1224
Q ss_pred HHHHHHHHccCCCCCCCCCH
Q 016009 369 SIVEVVFSCLNESPESRPTM 388 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~ 388 (397)
.+.+++.+||+.||++||++
T Consensus 229 ~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHHhccCHHHcCCC
Confidence 47889999999999999984
No 131
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.5e-43 Score=324.39 Aligned_cols=251 Identities=23% Similarity=0.307 Sum_probs=199.6
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||++... +|+.||+|+++.... ......+.+..|+.+++.++|+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 46888899999999999999654 789999999874221 1112346688999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 80 MEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred ECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 99999999999997653 3589999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCC-cccccccccccCccccc------CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccC---
Q 016009 284 DSSN-WTEFAGTYGYVAPELAY------TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--- 353 (397)
Q Consensus 284 ~~~~-~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 353 (397)
.... .....||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...+..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--------~~~i~~~~~ 226 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT--------YNNIMNFQR 226 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH--------HHHHHcCCC
Confidence 3322 23346899999999986 45678899999999999999999999864332110 011110
Q ss_pred -CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 354 -PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 354 -~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+... .....+.+++..|++ +|++|||+++++++
T Consensus 227 ~~~~~~~~----~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 FLKFPEDP----KVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ccCCCCCC----CCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0111111 123457888999998 99999999999864
No 132
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9.7e-42 Score=310.59 Aligned_cols=261 Identities=21% Similarity=0.348 Sum_probs=198.2
Q ss_pred cCCCCCccccccCcEEEEEEEeCC---------------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS---------------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVK 189 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 189 (397)
++|+..+.||+|+||.||++.... ...||+|.++.... ......+.+|++++++++|+|+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT---KTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC---HHHHHHHHHHHHHHHhCCCCCcCe
Confidence 478888999999999999986532 23589999875322 223567999999999999999999
Q ss_pred eEEEEecCCeeeEEEEeccCCCHHHhhccccc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCC
Q 016009 190 LYGFCSHARHSFLVYEFLKRGSLAAILSSDAA---------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSK 260 (397)
Q Consensus 190 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 260 (397)
+++++...+..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. +++|+||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 99999999999999999999999999864321 12478999999999999999999998 9999999999
Q ss_pred cEEeCCCCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCcccc
Q 016009 261 NLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK--GKHPRDFLSS 336 (397)
Q Consensus 261 Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t--g~~p~~~~~~ 336 (397)
||++++++.+||+|||++......... .....++..|+|||...++.++.++||||||+++|||++ |..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 999999999999999998765432211 122344678999999998889999999999999999998 5667654322
Q ss_pred ccccccccccccccccCCC-CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 337 ISSSFLNTDIELDEMLDPR-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....... ........... ...+. ..+..+.+++.+||+.||++|||+.+|++.|+
T Consensus 239 ~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 EQVIENT-GEFFRNQGRQIYLSQTP----LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHH-HHhhhhccccccCCCCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1100000 00000000000 00011 12346999999999999999999999999986
No 133
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.4e-43 Score=328.63 Aligned_cols=254 Identities=20% Similarity=0.277 Sum_probs=195.1
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|++.+.||+|+||.||++.. .+++.||+|.+..... ........+.+|++++++++||||+++++.+..++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence 3688899999999999999965 4689999999864211 1112345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+..
T Consensus 80 ~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 80 MDYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999996543 488899999999999999999998 999999999999999999999999999753210
Q ss_pred CC-------------------------------------------CCcccccccccccCcccccCCCCCcchhhHHHHHH
Q 016009 284 DS-------------------------------------------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVL 320 (397)
Q Consensus 284 ~~-------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~ 320 (397)
.. .......||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 00 00112468999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 016009 321 ALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRP---TMKIVSQQ 394 (397)
Q Consensus 321 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP---t~~~vl~~ 394 (397)
+|||++|+.||........... ... .......+. .......+.+++.+|+ .+|.+|+ |+.+++++
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~-----i~~-~~~~~~~~~--~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLK-----VIN-WETTLHIPS--QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHH-----Hhc-cCccccCCC--CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 9999999999875432110000 000 000111111 0112334667777766 4999999 89998864
No 134
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-41 Score=304.88 Aligned_cols=251 Identities=26% Similarity=0.452 Sum_probs=200.8
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
++|++.+.||+|+||.||+|...++..||+|.+.... ...+.+.+|++++++++||||+++++++.. ...++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-----cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 4688889999999999999987777789999986422 124678999999999999999999998754 5679999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 80 EYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EcCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999975432 3579999999999999999999998 9999999999999999999999999999765433
Q ss_pred CCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 285 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 285 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
... .....++..|+|||...+..++.++||||||+++|||+| |..||....... ....+.. .... ..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--------~~~~~~~-~~~~--~~ 224 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------VLDQVER-GYRM--PC 224 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--------HHHHHhc-CCCC--CC
Confidence 221 122345678999999988889999999999999999999 888876432110 0111111 0000 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+..+.+++.+|++.||++|||+.++++.|+
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 1234566889999999999999999999999986
No 135
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-41 Score=304.95 Aligned_cols=255 Identities=21% Similarity=0.318 Sum_probs=202.2
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCc-chhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSD-QIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
++|...+.||+|++|.||++.. .+++.+++|.+....... .....+.+.+|++++++++||||+++++++......++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999965 478999999986432211 12234578899999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|+||+++++|.+++.... .+++..+..++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999986543 488899999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCc---ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 283 PDSSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 283 ~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
...... ....++..|+|||.+.+..++.++||||+|+++|||++|+.||......... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--------~~~~~~~~~-- 225 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI--------FKIATQPTN-- 225 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH--------HHHhccCCC--
Confidence 321111 2345788999999999988999999999999999999999998643321100 000000000
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
..........+.+++.+||+.+|++|||+.+++++.
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 226 PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 001112334588999999999999999999999763
No 136
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.8e-42 Score=323.08 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=202.2
Q ss_pred HHHhcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEE
Q 016009 121 VRATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGF 193 (397)
Q Consensus 121 ~~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~ 193 (397)
....++|...+.||+|+||.||+|.+. .+..||+|+++..... ...+.+.+|++++.++. ||||++++++
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS---SEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh---hHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 334456778889999999999999753 3468999999753221 22457889999999997 9999999999
Q ss_pred EecCCeeeEEEEeccCCCHHHhhccccc----------------------------------------------------
Q 016009 194 CSHARHSFLVYEFLKRGSLAAILSSDAA---------------------------------------------------- 221 (397)
Q Consensus 194 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------- 221 (397)
+...+..++||||+++|+|.++++....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999864321
Q ss_pred -------------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCC
Q 016009 222 -------------------------------------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDIS 258 (397)
Q Consensus 222 -------------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 258 (397)
...+++.+++.++.|++.||+|||+. +++|||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlk 266 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLA 266 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCC
Confidence 12467888999999999999999998 99999999
Q ss_pred CCcEEeCCCCcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccc
Q 016009 259 SKNLLLDLEFEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLS 335 (397)
Q Consensus 259 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~ 335 (397)
|+||++++++.+||+|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999976532221 1122356788999999998889999999999999999998 888976432
Q ss_pred cccccccccccccccccCC--CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 336 SISSSFLNTDIELDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
... .....+.. +...+. .....+.+++.+||+.+|++||+++||++.|+
T Consensus 347 ~~~--------~~~~~~~~~~~~~~p~----~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 347 MNE--------QFYNAIKRGYRMAKPA----HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred chH--------HHHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111 01111111 111111 12345889999999999999999999999986
No 137
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.6e-42 Score=326.90 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=192.8
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.|+..+.||+|+||.||+|.. .+++.||+|++..... ........+.+|++++++++||||+++++.+.+++..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV-LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 577889999999999999965 4788999999864211 11123457889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 81 DYIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999986543 488899999999999999999998 9999999999999999999999999997532100
Q ss_pred C-----------------------------------------------CCcccccccccccCcccccCCCCCcchhhHHH
Q 016009 285 S-----------------------------------------------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSF 317 (397)
Q Consensus 285 ~-----------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~ 317 (397)
. .......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 00112468999999999999899999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccccccccccccc--CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC---HHHHH
Q 016009 318 GVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML--DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT---MKIVS 392 (397)
Q Consensus 318 G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~~vl 392 (397)
||++|||++|+.||........ ...+. ......+.. ........+++.+++ .+|++|++ +++++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLET--------QMKVINWQTSLHIPPQ--AKLSPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHH--------HHHHHccCCCcCCCCc--ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 9999999999999864332110 01111 111111110 112234666676665 49999987 88876
Q ss_pred HH
Q 016009 393 QQ 394 (397)
Q Consensus 393 ~~ 394 (397)
++
T Consensus 304 ~h 305 (382)
T cd05625 304 AH 305 (382)
T ss_pred cC
Confidence 53
No 138
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9.5e-42 Score=308.81 Aligned_cols=257 Identities=24% Similarity=0.371 Sum_probs=197.0
Q ss_pred CCCccccccCcEEEEEEEe-----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--Cee
Q 016009 128 DAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHS 200 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 200 (397)
...+.||+|+||+||++.. .+++.||+|.+..... ......+.+|++++++++||||+++++++... ...
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG---QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 7788899999999988642 3678899999865321 12356788999999999999999999988653 467
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+++|||+++++|.+++... .+++.+++.++.|++.||.|||+. +++|+||||+||++++++.++|+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 8999999999999998643 489999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCC---cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc------ccccccccc
Q 016009 281 LKPDSSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL------NTDIELDEM 351 (397)
Q Consensus 281 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~------~~~~~~~~~ 351 (397)
....... .....++..|+|||...+..++.++||||||+++|||+||..|+........... .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6533221 1122456679999999888899999999999999999999999754321100000 000011111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+.....+ .....+..+.+++..||+.+|++|||+++|+++|+
T Consensus 237 ~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 237 LERGMRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred hhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 11111110 01123456899999999999999999999999886
No 139
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=9.9e-42 Score=309.77 Aligned_cols=254 Identities=24% Similarity=0.421 Sum_probs=198.8
Q ss_pred CCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
+|...+.||+|+||.||+|... ....+++|.+..... .....++.+|+++++.++||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS---SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC---HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC
Confidence 4667788999999999999642 235788888764222 2234678999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHhhcccc---------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCC
Q 016009 200 SFLVYEFLKRGSLAAILSSDA---------------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDIS 258 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 258 (397)
.++++||+.+++|.+++.... ....+++.+++.++.|++.||+|||+. +++|||||
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dik 154 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLA 154 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhh
Confidence 999999999999999875421 123588999999999999999999998 99999999
Q ss_pred CCcEEeCCCCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccc
Q 016009 259 SKNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLS 335 (397)
Q Consensus 259 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~ 335 (397)
|+||++++++.++|+|||++......... .....++..|+|||...+..++.++||||||+++|||+| |..||....
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999765433221 122345678999999988889999999999999999999 999986432
Q ss_pred cccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 336 SISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
... +..........+ ........+.+++.+||+.+|++||++.++++.|+
T Consensus 235 ~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 235 PER---------LFNLLKTGYRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284 (290)
T ss_pred HHH---------HHHHHhCCCCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 211 111111111100 01122346889999999999999999999999986
No 140
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.5e-42 Score=309.90 Aligned_cols=254 Identities=20% Similarity=0.331 Sum_probs=199.8
Q ss_pred CCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
+|...+.||+|+||.||+|... +++.||+|++..... ....+.+..|+.+++.++||||+++++++.....
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE---GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 4566788999999999999653 357899999875322 1234678899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHhhcccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC
Q 016009 200 SFLVYEFLKRGSLAAILSSDA-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL 266 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 266 (397)
.++++||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecC
Confidence 999999999999999985321 123488899999999999999999998 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccc
Q 016009 267 EFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLN 343 (397)
Q Consensus 267 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~ 343 (397)
++.+||+|||+++........ .....+++.|+|||.+.++.++.++||||||+++|||++ |..||......
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------ 233 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------ 233 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence 999999999998765432211 123345778999999988889999999999999999998 88887532211
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+....... .+.+..+.+++..||+.+|++||++++|++.|+
T Consensus 234 --~~~~~i~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 234 --DVIEMIRNRQVLPCP---DDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred --HHHHHHHcCCcCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 111222222211111 123455889999999999999999999999885
No 141
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-41 Score=306.88 Aligned_cols=250 Identities=25% Similarity=0.400 Sum_probs=195.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCC----EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
++|+..+.||+|+||.||+|.+. +++ .+++|.+..... .....++..|+..+++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG---RQTFQEITDHMLAMGSLDHAYIVRLLGICPG-AS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc---hHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Cc
Confidence 46778899999999999999753 454 477787653211 1224567888889999999999999998854 45
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccce
Confidence 788999999999999997543 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC--
Q 016009 280 FLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-- 354 (397)
Q Consensus 280 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 354 (397)
....... ......++..|+|||...++.++.++||||||+++||+++ |+.||....... ..+++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---------~~~~~~~~~ 228 (279)
T cd05111 158 LLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---------VPDLLEKGE 228 (279)
T ss_pred eccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHHCCC
Confidence 6543322 1233456778999999998899999999999999999998 999986433211 0111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+. .+...+.+++.+||+.||++|||+.|+++.|+
T Consensus 229 ~~~~~~----~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 229 RLAQPQ----ICTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred cCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111 12345788999999999999999999999874
No 142
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-41 Score=303.99 Aligned_cols=243 Identities=26% Similarity=0.453 Sum_probs=193.4
Q ss_pred cccccCcEEEEEEEe---CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 132 CIGNGGHGSVYRAEL---PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
.||+|+||.||+|.+ .++..+|+|+++.... .....+++..|+.+++.++||||+++++++. .+..++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999954 3578899999864322 2234577899999999999999999999885 456789999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++..........
T Consensus 79 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 79 LGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 999999986543 589999999999999999999998 99999999999999999999999999998664432211
Q ss_pred ---ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC--CCCCCCcc
Q 016009 289 ---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP--RLPAPSRS 362 (397)
Q Consensus 289 ---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 362 (397)
....++..|+|||.+....++.++|+||||+++|||++ |+.||....... ....+.. ..+.+.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---------~~~~i~~~~~~~~~~-- 221 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE---------VTQMIESGERMECPQ-- 221 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---------HHHHHHCCCCCCCCC--
Confidence 12233578999999988889999999999999999998 999987433211 0111111 111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+++.+||+.||++||++.+|.+.|+
T Consensus 222 --~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 222 --RCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred --CCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 22345889999999999999999999999986
No 143
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.1e-41 Score=307.31 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=202.8
Q ss_pred hcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 197 (397)
.++|...+.||+|+||.||+|... ++..|++|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 357888899999999999999653 24689999976422 222356788999999999999999999999999
Q ss_pred CeeeEEEEeccCCCHHHhhccccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcE
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAA-------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEA 270 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 270 (397)
...++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCE
Confidence 999999999999999999865332 22478999999999999999999998 99999999999999999999
Q ss_pred EEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccc
Q 016009 271 HVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIE 347 (397)
Q Consensus 271 kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 347 (397)
||+|||+++....... ......++..|+|||.+.+..++.++||||||+++||++| |..||....... .
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--------~ 230 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--------V 230 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--------H
Confidence 9999999876543321 1123346788999999988889999999999999999998 999986432211 0
Q ss_pred cccccCCCC-CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 348 LDEMLDPRL-PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 348 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+.+... ..+. .....+.+++.+||+.+|++|||+.++++.|+
T Consensus 231 ~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 231 LKFVIDGGHLDLPE----NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHhcCCCCCCCC----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111111 1111 12456889999999999999999999999986
No 144
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.1e-42 Score=308.28 Aligned_cols=255 Identities=26% Similarity=0.415 Sum_probs=200.1
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH 196 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 196 (397)
.+++|...+.||+|++|.||+|... .+..|++|.+..... ......+..|+.++++++|+||+++++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS---EQDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 3467888899999999999999764 356789998754221 2234678999999999999999999999998
Q ss_pred CCeeeEEEEeccCCCHHHhhccccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC---c
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAA----AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF---E 269 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~ 269 (397)
....++||||+++++|.+++..... ...+++.++..++.|++.||+|||+. +++|+||||+||+++.++ .
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcc
Confidence 8899999999999999999865432 12589999999999999999999998 999999999999998765 5
Q ss_pred EEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 016009 270 AHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI 346 (397)
Q Consensus 270 ~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 346 (397)
+||+|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-------- 229 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-------- 229 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 999999999865322211 112233568999999998899999999999999999997 999986432110
Q ss_pred ccccccC--CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 347 ELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 347 ~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+. .....+. ..+..+.+++.+||+.+|++|||+.+|+++|+
T Consensus 230 -~~~~~~~~~~~~~~~----~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 230 -VMEFVTGGGRLDPPK----GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -HHHHHHcCCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 011111 1111111 22346889999999999999999999999986
No 145
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.8e-41 Score=309.05 Aligned_cols=262 Identities=24% Similarity=0.397 Sum_probs=201.2
Q ss_pred hcCCCCCccccccCcEEEEEEEeCC-----------------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPS-----------------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 186 (397)
..+|+..+.||+|+||.||++...+ +..||+|.+..... ....+.+.+|++++++++|||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS---DNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC---HHHHHHHHHHHHHHHhcCCCC
Confidence 3578889999999999999986542 24589999875322 133578899999999999999
Q ss_pred eeeeEEEEecCCeeeEEEEeccCCCHHHhhccccc--------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCC
Q 016009 187 IVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAA--------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDIS 258 (397)
Q Consensus 187 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 258 (397)
++++++++..++..+++|||+++++|.+++..... ...+++..++.++.|++.||+|||+. +++|+|||
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlk 157 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLA 157 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccc
Confidence 99999999999999999999999999999865431 12589999999999999999999998 99999999
Q ss_pred CCcEEeCCCCcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCcc
Q 016009 259 SKNLLLDLEFEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK--GKHPRDFL 334 (397)
Q Consensus 259 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t--g~~p~~~~ 334 (397)
|+||+++.++.++|+|||++........ ......++..|+|||...+..++.++||||||+++|||++ |..|+...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999999876533221 1223345778999999988889999999999999999998 67776533
Q ss_pred cccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 335 SSISSSFLNTDIELDEML-DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..... .. ...... +.............+.++.+++.+||+.||++|||+.+|++.|+
T Consensus 238 ~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 238 TDQQV--IE---NAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ChHHH--HH---HHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 21110 00 000000 00000000001122346899999999999999999999999986
No 146
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=9.6e-42 Score=311.45 Aligned_cols=256 Identities=23% Similarity=0.388 Sum_probs=201.7
Q ss_pred hcCCCCCccccccCcEEEEEEEe------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEec
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSH 196 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 196 (397)
.++|...+.||+|+||.||++.. .++..||+|.++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 35788899999999999999953 1345799998865322 22346789999999999 79999999999999
Q ss_pred CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeec
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 276 (397)
.+..+++|||+++|+|.+++..... ..+++.++..++.+++.||+|||+. +++|+||||+||+++.++.++++|||
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999999865432 3489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC
Q 016009 277 IAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD 353 (397)
Q Consensus 277 ~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||....... .......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--------~~~~~~~ 258 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--------KFYKLIK 258 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--------HHHHHHH
Confidence 99865433211 122345678999999998889999999999999999998 999976432210 0111111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 354 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...... ........+.+++.+||+.+|++|||+.|+++.|+
T Consensus 259 ~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 259 EGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred cCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 111100 00112345889999999999999999999999886
No 147
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.6e-41 Score=304.89 Aligned_cols=259 Identities=24% Similarity=0.350 Sum_probs=200.4
Q ss_pred HHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 120 IVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 120 ~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
++.+++++.....||+|+||.||+|.. .++..|++|.+.... ....+.+.+|++++++++|+||+++++++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 78 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG 78 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC
Confidence 345667777778899999999999965 467889999876422 223567899999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC-CCcEEEeeecc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL-EFEAHVADFGI 277 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~ 277 (397)
..++|+||+++++|.+++.........++..+..++.|++.||+|||+. +++|+||||+||+++. ++.++|+|||+
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchh
Confidence 9999999999999999997543211227888999999999999999998 9999999999999976 67999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPR 355 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
+..............++..|+|||+..+.. ++.++||||||+++|+|++|+.|+............ .... -..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~--~~~~-~~~~~ 232 (268)
T cd06624 156 SKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK--VGMF-KIHPE 232 (268)
T ss_pred heecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh--hhhh-ccCCC
Confidence 876543333333446789999999986543 788999999999999999999998643211100000 0000 00111
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
++ ......+.+++.+||+.+|++|||+.|++++
T Consensus 233 ~~------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 233 IP------ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CC------cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 11 1233458889999999999999999999874
No 148
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-44 Score=294.95 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=206.5
Q ss_pred hcCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
++.|+.-++||+|.|+.||++ ..++|+.+|+|.+...... ..+.+++.+|+.|.+.++||||+++...+.+....|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 346777788999999999999 5668999999988643222 2357889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC---CcEEEeeecccc
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE---FEAHVADFGIAK 279 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~ 279 (397)
|+|+|.|++|..-+-.+. -.++..+-..+.||+++|.|+|.+ +|||||+||+|+++-.. .-+||+|||++.
T Consensus 88 vFe~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred EEecccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEE
Confidence 999999999976664432 367888889999999999999999 99999999999999543 358999999999
Q ss_pred ccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 280 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 280 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
.+. +.......+|||+|||||+++..+|+..+|||+.|++||-|+.|.+||....... -.+.+.......+
T Consensus 162 ~l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--------lye~I~~g~yd~~ 232 (355)
T KOG0033|consen 162 EVN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------LYEQIKAGAYDYP 232 (355)
T ss_pred EeC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--------HHHHHhccccCCC
Confidence 888 5556677899999999999999999999999999999999999999986422210 0111222222222
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+..+.....+..+|+.+||..||.+|.|+.|.+++
T Consensus 233 ~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 233 SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 22334445567889999999999999999998865
No 149
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=9.4e-42 Score=339.09 Aligned_cols=259 Identities=27% Similarity=0.432 Sum_probs=200.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|... +|+.||+|++...... .....+.+.+|++++++++||||+++++++.+++..+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~-~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSE-NPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccccc-CHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 46888899999999999999654 6899999998753322 223356799999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhcccc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 204 YEFLKRGSLAAILSSDA--------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
|||++||+|.+++.... ....+++..++.++.|+++||+|||+. +++||||||+||+++.++.++|+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 99999999999886421 113467788899999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCC------------------CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccc
Q 016009 276 GIAKFLKPDS------------------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSI 337 (397)
Q Consensus 276 g~~~~~~~~~------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~ 337 (397)
|++....... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9998652110 0011246899999999999999999999999999999999999998642211
Q ss_pred cccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhc
Q 016009 338 SSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRP-TMKIVSQQLQ 396 (397)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-t~~~vl~~Le 396 (397)
.... ...+.++....+ ..+.+..+.+++.+|++.||++|| +++++++.|+
T Consensus 238 ki~~------~~~i~~P~~~~p---~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 238 KISY------RDVILSPIEVAP---YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred hhhh------hhhccChhhccc---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 0000 011111111001 123345688999999999999996 5666666553
No 150
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=9.5e-42 Score=304.03 Aligned_cols=251 Identities=21% Similarity=0.318 Sum_probs=202.4
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|+||.||++... +++.+++|.++.... ....+.+..|+.+++.++|+|++++.+.+..++..+++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEE
Confidence 4677889999999999999654 788999999864222 223567889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||||+||++++++.++++|||.+......
T Consensus 78 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 78 EYCDGGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred eeCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 99999999998865332 4578999999999999999999998 9999999999999999999999999999766543
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........++..|+|||+..+..++.++|+||||+++|+|++|+.||........ ...+......... .
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~---~ 222 (255)
T cd08219 154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL--------ILKVCQGSYKPLP---S 222 (255)
T ss_pred ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH--------HHHHhcCCCCCCC---c
Confidence 3333445688899999999988899999999999999999999999864322110 0011111111001 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.||++|||+.+++..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 223458899999999999999999999875
No 151
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9.3e-42 Score=309.62 Aligned_cols=258 Identities=22% Similarity=0.366 Sum_probs=200.9
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS 195 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 195 (397)
...++|++.+.||+|+||.||+|... .+..||+|.+..... ......+.+|+.+++.++||||+++++++.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS---LRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 34568899999999999999999543 245799998764221 223456889999999999999999999999
Q ss_pred cCCeeeEEEEeccCCCHHHhhccccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC
Q 016009 196 HARHSFLVYEFLKRGSLAAILSSDAA-------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF 268 (397)
Q Consensus 196 ~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 268 (397)
..+..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+. +++||||||+||++++++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~ 156 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 156 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCC
Confidence 99999999999999999999964321 23467888999999999999999998 999999999999999999
Q ss_pred cEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccc
Q 016009 269 EAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTD 345 (397)
Q Consensus 269 ~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~ 345 (397)
.++|+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-------- 228 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-------- 228 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--------
Confidence 9999999998765432211 112234678999999998889999999999999999998 78887532211
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 346 IELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+....... ......+.+++.+|++.||++|||+.++++.|+
T Consensus 229 ~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 276 (288)
T cd05061 229 QVLKFVMDGGYLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276 (288)
T ss_pred HHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111111111111111 122346899999999999999999999999875
No 152
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3e-41 Score=305.71 Aligned_cols=259 Identities=29% Similarity=0.453 Sum_probs=197.8
Q ss_pred cCCCCCccccccCcEEEEEEEe-----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec--C
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--A 197 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~ 197 (397)
.+|+..+.||+|+||.||++.. .++..|++|.+... .....+.+.+|++++++++||||+++++++.. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 4677889999999999999964 35789999998642 12235678999999999999999999998743 3
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcc
Confidence 46889999999999999986543 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCc---ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccc-------cc
Q 016009 278 AKFLKPDSSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTD-------IE 347 (397)
Q Consensus 278 ~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~ 347 (397)
+.......... ....++..|+|||...+..++.++||||||+++|||++|..|+.............. ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred cccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence 98765432211 112234569999999888899999999999999999998877543221100000000 00
Q ss_pred cccccCC--CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 348 LDEMLDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 348 ~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+.+.+.. ..+.+ ......+.+++.+||+.+|++|||+++|++.|+
T Consensus 235 ~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 235 LIELLKNNGRLPAP----PGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred HHHHHhcCCcCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 0011111 11111 122345889999999999999999999999986
No 153
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.5e-41 Score=301.81 Aligned_cols=246 Identities=25% Similarity=0.425 Sum_probs=196.8
Q ss_pred cccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
.||+|+||.||+|...+++.+|+|.+..... ......+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP---QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 5899999999999888899999999865322 1234568899999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc-cc
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW-TE 290 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~ 290 (397)
|.+++.... ..+++.+++.++.+++.||.|+|+. +++|+||+|+||++++++.++|+|||++.......... ..
T Consensus 79 L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 79 FLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 999986543 3588999999999999999999998 99999999999999999999999999987543222111 12
Q ss_pred ccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 016009 291 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRS 369 (397)
Q Consensus 291 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
..++..|+|||+..+..++.++||||||+++||+++ |..||.......... ..... .....+. ..+..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~-----~~~~~--~~~~~~~----~~~~~ 222 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE-----QVEKG--YRMSCPQ----KCPDD 222 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHHcC--CCCCCCC----CCCHH
Confidence 234567999999998889999999999999999998 999986432211000 00000 0111111 22356
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 370 IVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 370 l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+.+++.+|++.+|++||++.+++++|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 889999999999999999999999885
No 154
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.8e-41 Score=308.91 Aligned_cols=261 Identities=22% Similarity=0.375 Sum_probs=199.2
Q ss_pred cCCCCCccccccCcEEEEEEEeC-----------------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCce
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-----------------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI 187 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 187 (397)
++|++.+.||+|+||.||++... ++..+|+|.+..... ....+++.+|++++++++|+||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN---KNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCc
Confidence 46888999999999999998532 234689999864321 2235688999999999999999
Q ss_pred eeeEEEEecCCeeeEEEEeccCCCHHHhhccccc--------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCC
Q 016009 188 VKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAA--------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISS 259 (397)
Q Consensus 188 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~ 259 (397)
+++++++...+..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+. +++|+||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp 158 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLAT 158 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCh
Confidence 9999999999999999999999999999865331 12478889999999999999999998 999999999
Q ss_pred CcEEeCCCCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCccc
Q 016009 260 KNLLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK--GKHPRDFLS 335 (397)
Q Consensus 260 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t--g~~p~~~~~ 335 (397)
+||++++++.++|+|||++..+...... .....++..|+|||...++.++.++||||||+++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 9999999999999999998765432211 122334678999999888889999999999999999998 677875332
Q ss_pred ccccccccccccccc-ccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 336 SISSSFLNTDIELDE-MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 336 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..... ......... ......+.+. .++..+.+++.+||+.||++|||+.+|++.|+
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 239 DEQVI-ENTGEFFRDQGRQVYLPKPA----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred hHHHH-HHHHHHHhhccccccCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 21100 000000000 0000111111 12356889999999999999999999999886
No 155
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-41 Score=303.51 Aligned_cols=253 Identities=26% Similarity=0.519 Sum_probs=204.8
Q ss_pred HhcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
..++|.+.+.||+|+||.||++..++++.+++|.+.... ...+++.+|++++++++|+|++++++++......++
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYI 78 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEE
Confidence 346788899999999999999988888899999987422 235678999999999999999999999999899999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+++++|.+++..... ..+++.++..++.+++.|++|||+. +++|+||||+||++++++.++|+|||++....
T Consensus 79 v~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIE 154 (261)
T ss_pred EEeccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceecc
Confidence 9999999999999976442 4689999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCC-CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 016009 283 PDSS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLPAP 359 (397)
Q Consensus 283 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 359 (397)
.... ......++..|+|||.+.+..++.++|+||||++++|++| |+.||...... .....+... ..+.+
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 226 (261)
T cd05034 155 DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGYRMPRP 226 (261)
T ss_pred chhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 3211 1112234568999999998889999999999999999999 99998543211 011111110 11111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. +.+..+.+++.+|++.+|++||+++++++.|+
T Consensus 227 ~----~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 227 P----NCPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred C----CCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 1 12345889999999999999999999999886
No 156
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.7e-41 Score=302.62 Aligned_cols=244 Identities=25% Similarity=0.419 Sum_probs=191.6
Q ss_pred ccccCcEEEEEEEeC---CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccC
Q 016009 133 IGNGGHGSVYRAELP---SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 133 lg~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 209 (397)
||+|+||.||+|.+. ++..||+|.+..... ....+.+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~---~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE---KSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccC---hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 899999999999653 355799999865321 2235678999999999999999999998864 568999999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc-
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW- 288 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 288 (397)
++|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++..........
T Consensus 79 ~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 79 GPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99999986533 3589999999999999999999998 99999999999999999999999999997654332211
Q ss_pred --ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 289 --TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 289 --~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
....++..|+|||...+..++.++||||||+++||+++ |..||........... +... .....+. .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~~~~--~~~~~~~----~ 222 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSF-----IEQG--KRLDCPA----E 222 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH-----HHCC--CCCCCCC----C
Confidence 11223568999999988889999999999999999996 9999865432110000 0000 0111111 2
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 366 KLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...++.+++.+||+.||++||++.+|.+.|+
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMR 253 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 2346889999999999999999999999886
No 157
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.1e-41 Score=301.94 Aligned_cols=249 Identities=27% Similarity=0.452 Sum_probs=202.2
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.++|+..+.||+|+||.||+|... |+.|++|.+..... ..+++.+|+.++++++|+|++++++++...+..++|
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 78 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEE
Confidence 357888899999999999999874 78999999875321 357899999999999999999999999989999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred EEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccc
Confidence 999999999999875442 3589999999999999999999998 999999999999999999999999999986532
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
... ....+..|+|||.+.+..++.++||||||+++||+++ |..||....... +...+..... ...
T Consensus 155 ~~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---------~~~~~~~~~~--~~~ 220 (256)
T cd05039 155 GQD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---------VVPHVEKGYR--MEA 220 (256)
T ss_pred ccc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---------HHHHHhcCCC--CCC
Confidence 221 2334668999999988889999999999999999997 999976332110 0000000000 000
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+..+.+++.+||+.+|++|||+.+++++|+
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 1122356889999999999999999999999986
No 158
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3e-41 Score=301.68 Aligned_cols=250 Identities=27% Similarity=0.477 Sum_probs=199.9
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
++|...+.||+|++|.||++...++..+++|.+.... ...+.+.+|++++++++|+|++++++++. .+..+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 3577788899999999999988777789999876421 12467889999999999999999999875 45688999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++..... ..+++..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 80 EFMGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 99999999999975432 4589999999999999999999998 9999999999999999999999999999765432
Q ss_pred CC-CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCCCc
Q 016009 285 SS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLPAPSR 361 (397)
Q Consensus 285 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 361 (397)
.. ......++..|+|||...+..++.++||||||+++|||+| |+.||....... ....+... ..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~~-- 225 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--------VLEQVERGYRMPCP-- 225 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCCC--
Confidence 21 1122345678999999988889999999999999999999 899986432211 00111110 11111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+||+.||++||++++|++.|+
T Consensus 226 --~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 226 --QGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred --cccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 133456889999999999999999999999986
No 159
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.6e-41 Score=301.17 Aligned_cols=248 Identities=29% Similarity=0.508 Sum_probs=201.8
Q ss_pred ccccccCcEEEEEEEeCC----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 131 YCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
+.||+|+||.||++.... +..|++|.+....... ..+.+.+|++.++.++|+|++++++++......++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE---ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh---HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEe
Confidence 359999999999997653 7899999987533322 367899999999999999999999999999999999999
Q ss_pred ccCCCHHHhhccccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 207 LKRGSLAAILSSDAA------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+++++|.+++..... ...+++.+++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccc
Confidence 999999999976521 24689999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCC--CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCC
Q 016009 281 LKPDS--SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD-PRL 356 (397)
Q Consensus 281 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 356 (397)
..... .......++..|+|||.+....++.++||||+|+++|||++ |..||....... ....+.+ ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~ 226 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--------VLEYLRKGYRL 226 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCCC
Confidence 65432 12233457889999999988889999999999999999999 699987543211 0111111 111
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+ ...+..+.+++.+||+.+|++|||+.|++++|+
T Consensus 227 ~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 PKP----EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCC----ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111 122456889999999999999999999999885
No 160
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.1e-41 Score=305.04 Aligned_cols=250 Identities=30% Similarity=0.463 Sum_probs=203.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||.|++|.||+|... +++.|++|.+..... ......+.+|+++++.++|+|++++.+++..+...++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA---EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc---chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEE
Confidence 35777888999999999999654 688999999864321 22346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.+++... .+++..++.++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 78 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 78 MEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred EEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 9999999999998653 589999999999999999999998 999999999999999999999999999987764
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........++..|+|||.+.+..++.++||||||+++|||+||+.||........... ......+.....
T Consensus 151 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~---- 221 (274)
T cd06609 151 TMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFL-----IPKNNPPSLEGN---- 221 (274)
T ss_pred cccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHH-----hhhcCCCCCccc----
Confidence 43333445788899999999988899999999999999999999999864332110000 000011111110
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||..+|++|||+++++++
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 133458899999999999999999999864
No 161
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.6e-41 Score=306.72 Aligned_cols=253 Identities=26% Similarity=0.486 Sum_probs=199.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
+++...+.||+|+||.||++... ++..+++|.+... .....+.+.+|+++++.++|+||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 35667888999999999999532 3567899987642 2233568999999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAA------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL 266 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 266 (397)
..+++|||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +++|+||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 99999999999999999865431 12488999999999999999999998 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccc
Q 016009 267 EFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLN 343 (397)
Q Consensus 267 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~ 343 (397)
++.++|+|||++......... .....+++.|+|||...+..++.++||||||+++|||++ |+.||.......
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----- 232 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE----- 232 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-----
Confidence 999999999998755432211 122334678999999998889999999999999999998 899975432211
Q ss_pred cccccccccCCC-CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 344 TDIELDEMLDPR-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 344 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+.... ...+. ..+..+.+++.+||+.||++||++++|++.|+
T Consensus 233 ---~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 233 ---AIECITQGRELERPR----TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---HHHHHHcCccCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 011111111 11111 22345889999999999999999999999986
No 162
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-41 Score=309.54 Aligned_cols=250 Identities=27% Similarity=0.447 Sum_probs=202.3
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.+|+..+.||.|++|.||+|.. .+++.|++|.+.... ....+.+.+|+++++.++|||++++++++...+..++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK----QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc----CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 3588888999999999999964 578999999986422 22356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.+++... .+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 95 MEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999988542 489999999999999999999998 999999999999999999999999999886654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........++..|+|||.+.+..++.++||||||+++|+|++|+.||........... ......+....+
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~-----~~~~~~~~~~~~---- 238 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNGTPELQNP---- 238 (296)
T ss_pred ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHhcCCcccCCc----
Confidence 43333445688899999999988899999999999999999999999865432111000 000000111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.||++|||+.+++.+
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1233458889999999999999999999863
No 163
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.1e-41 Score=308.52 Aligned_cols=253 Identities=20% Similarity=0.253 Sum_probs=197.1
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|+||+||++.. .+++.+|+|.+..... ........+.+|++++++++|+|++++.+++..++..+++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI-KKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh-hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 55667899999999999965 4789999999864221 111223457889999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred eccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999999988865432 3599999999999999999999998 99999999999999999999999999987654322
Q ss_pred CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 286 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
......|+..|+|||.+.+..++.++|+||||+++|||++|..||......... ......+...... ....
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~----~~~~~~~~~~~~~----~~~~ 227 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR----EEVDRRVLETEEV----YSAK 227 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHhhhccccc----cCcc
Confidence 223457899999999999888999999999999999999999998643211000 0000011111111 1112
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 016009 366 KLRSIVEVVFSCLNESPESRPT-----MKIVSQ 393 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt-----~~~vl~ 393 (397)
....+.+|+..|++.||++||+ +.+++.
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 3345788999999999999999 667665
No 164
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.5e-41 Score=307.86 Aligned_cols=263 Identities=24% Similarity=0.306 Sum_probs=198.5
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||+|... +++.||+|++...... ......+.+|+.++++++|||++++++++..++..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE--EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc--CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 4677888999999999999764 7899999998653221 223467889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||++ ++|.+++........+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 9997 68888886544445689999999999999999999998 9999999999999999999999999998765433
Q ss_pred CCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc-------cccc---cccccc-
Q 016009 285 SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL-------NTDI---ELDEML- 352 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~-------~~~~---~~~~~~- 352 (397)
........+++.|+|||.+.+. .++.++||||||+++|||+||+.||........... ..+. ......
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 3333334678899999987654 578899999999999999999999864322110000 0000 000000
Q ss_pred -CCCCCC-CC----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 -DPRLPA-PS----RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 -~~~~~~-~~----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+..+. .. ........++.+++.+||+.||++|||+++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000 00 0001123457899999999999999999999864
No 165
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.4e-41 Score=303.70 Aligned_cols=253 Identities=28% Similarity=0.504 Sum_probs=201.0
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCC---EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQ---VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
.++|+..+.||+|+||.||+|... +++ .+++|.+..... ....+.+..|++++++++|||++++.+++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT---EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC---HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 346788899999999999999764 333 799998864322 2235678999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++|+||||+||++++++.++|+|||++.
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccce
Confidence 999999999999999986543 3589999999999999999999998 99999999999999999999999999987
Q ss_pred ccCCCCCCc-c--cccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-
Q 016009 280 FLKPDSSNW-T--EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP- 354 (397)
Q Consensus 280 ~~~~~~~~~-~--~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 354 (397)
......... . ....+..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--------~~~~~i~~~~ 227 (268)
T cd05063 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------EVMKAINDGF 227 (268)
T ss_pred ecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhcCC
Confidence 654322211 1 1123457999999988889999999999999999998 99998543221 011111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+ .+....+.+++.+||+.+|++||++.+|++.|+
T Consensus 228 ~~~~~----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 228 RLPAP----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265 (268)
T ss_pred CCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111 123456889999999999999999999999885
No 166
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=9.9e-42 Score=308.80 Aligned_cols=254 Identities=21% Similarity=0.282 Sum_probs=198.9
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|+||.||++.. .+++.||+|.+...... .......+..|+.++++++|+|++++++.+...+..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 56678899999999999965 47899999998642221 12223567889999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++++|.+++..... ..+++.++..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999998854332 4589999999999999999999998 99999999999999999999999999987654322
Q ss_pred CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 286 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||........ ............. .....
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-----~~~~~~~~~~~~~---~~~~~ 227 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-----REEVERLVKEVQE---EYSEK 227 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-----HHHHHhhhhhhhh---hcCcc
Confidence 22334789999999999998999999999999999999999999864321100 0001111110000 00112
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 016009 366 KLRSIVEVVFSCLNESPESRPT-----MKIVSQQ 394 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt-----~~~vl~~ 394 (397)
....+.+++..||+.||++||| ++|++++
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 2345889999999999999999 8888764
No 167
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.6e-41 Score=303.21 Aligned_cols=252 Identities=25% Similarity=0.419 Sum_probs=194.3
Q ss_pred CCCccccccCcEEEEEEEeCC-CC--EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC------C
Q 016009 128 DAQYCIGNGGHGSVYRAELPS-GQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA------R 198 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 198 (397)
.+.+.||+|+||.||+|...+ +. .+|+|.++..... ....+.+..|+++++.++|+||+++++++... .
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT--RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 456789999999999997654 33 5899988653222 23357789999999999999999999987432 2
Q ss_pred eeeEEEEeccCCCHHHhhcccc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 199 HSFLVYEFLKRGSLAAILSSDA---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
..+++|||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 4689999999999998874322 123589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc
Q 016009 276 GIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEML 352 (397)
Q Consensus 276 g~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
|++......... .....+++.|+|||...+..++.++||||||+++|||++ |+.||....... ....+.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~~~~~~ 228 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE--------IYDYLR 228 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHH
Confidence 999876433221 122345678999999998899999999999999999999 788886432210 001111
Q ss_pred CC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 353 DP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.. ....+. .....+.+++.+||+.||++|||+.++++.|+
T Consensus 229 ~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 269 (272)
T cd05075 229 QGNRLKQPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELE 269 (272)
T ss_pred cCCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 111111 22345889999999999999999999999886
No 168
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.5e-42 Score=310.00 Aligned_cols=255 Identities=30% Similarity=0.513 Sum_probs=199.7
Q ss_pred CCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|+||+||++... +++.+|+|.+..... ..........|+.++++++||||+++++++......++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI--EEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH--HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc--cccccchhhhhhhcccccccccccccccccccccccccccc
Confidence 456788999999999999765 566899999875322 22223344569999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++++|.+++... ..+++..++.++.|+++||.+||+. +++|+||||+||++++++.++|+|||.+.......
T Consensus 79 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~ 152 (260)
T PF00069_consen 79 YCPGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN 152 (260)
T ss_dssp EETTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred cccccccccccccc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 99999999999732 4589999999999999999999999 99999999999999999999999999997653333
Q ss_pred CCcccccccccccCccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 286 SNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
.......++..|+|||... +..++.++||||+|+++++|++|..||........... .................
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 227 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI-----IEKILKRPLPSSSQQSR 227 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH-----HHHHHHTHHHHHTTSHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh-----hhhcccccccccccccc
Confidence 4445567899999999998 88899999999999999999999999875411110000 00000000000000000
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++..||+.||++|||+.+++++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112569999999999999999999999864
No 169
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.7e-41 Score=309.25 Aligned_cols=253 Identities=27% Similarity=0.421 Sum_probs=196.4
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCC--EEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 200 (397)
++|++.+.||+|+||.||+|..+ ++. .+++|.++.... ....+.+.+|++++.++ +||||+++++++...+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS---ENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC---HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 47888899999999999999765 333 478888763221 12346789999999999 799999999999999999
Q ss_pred eEEEEeccCCCHHHhhcccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC
Q 016009 201 FLVYEFLKRGSLAAILSSDA-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE 267 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 267 (397)
++++||+++++|.+++.... ....+++.+++.++.|++.||+|||+. +++|+||||+||+++++
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGEN 155 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCC
Confidence 99999999999999986532 113588999999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 016009 268 FEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI 346 (397)
Q Consensus 268 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 346 (397)
+.+||+|||++........ ......+..|+|||...+..++.++||||||+++|||++ |..||.......
T Consensus 156 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-------- 226 (297)
T cd05089 156 LASKIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-------- 226 (297)
T ss_pred CeEEECCcCCCccccceec-cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 9999999999864321111 111223457999999988889999999999999999998 999986432211
Q ss_pred ccccccCC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 347 ELDEMLDP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 347 ~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+... ....+ ......+.+++.+||+.+|.+|||++++++.|+
T Consensus 227 ~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 227 LYEKLPQGYRMEKP----RNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 00011100 11111 122345889999999999999999999998875
No 170
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.3e-41 Score=300.70 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=205.1
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||.|+||.||.++. .+++.+++|.+..... .....+++.+|++++++++|+||+++++++.+.+..+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL--SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc--chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence 477788999999999999954 4688999998764221 1233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.... ...+++.++..++.|++.|+.|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 79 EYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred EecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 9999999999997653 24589999999999999999999998 9999999999999999999999999999876544
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........+++.|+|||...+..++.++||||||+++|||++|..||...... .....+......... .
T Consensus 155 ~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~---~ 223 (256)
T cd08221 155 YSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--------NLVVKIVQGNYTPVV---S 223 (256)
T ss_pred cccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCc---c
Confidence 43334457899999999998888899999999999999999999998642211 111111111111111 2
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
.....+.+++.+||+.+|++||+++++++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 2345588999999999999999999999875
No 171
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.6e-41 Score=311.21 Aligned_cols=261 Identities=18% Similarity=0.285 Sum_probs=197.6
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||+|..+ +++.||+|.+...... .....+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC---CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 46888899999999999999654 6788999998653221 1234677899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 83 FEYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred EeCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 999975 8888775543 3588999999999999999999998 999999999999999999999999999976544
Q ss_pred CCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccc-----cc--ccccccc------c
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS-----SF--LNTDIEL------D 349 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~-----~~--~~~~~~~------~ 349 (397)
.........++..|+|||.+.+ ..++.++||||||+++|||+||+.||........ .. ....... .
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 157 PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred CccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 3333344567899999998765 4588999999999999999999999864322100 00 0000000 0
Q ss_pred cccCCCCCCC-C----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 350 EMLDPRLPAP-S----RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 350 ~~~~~~~~~~-~----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+...+.. . .........+.+++.+|++.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000000 0 0001123457899999999999999999999874
No 172
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-41 Score=307.17 Aligned_cols=256 Identities=23% Similarity=0.368 Sum_probs=202.5
Q ss_pred hcCCCCCccccccCcEEEEEEEeCC-----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec-C
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPS-----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH-A 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~ 197 (397)
.++|...+.||+|+||.||+|...+ +..|++|++.... .....+.+.+|+.++++++|+|++++++++.. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA---SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 4578888999999999999997655 6889999876422 22335778899999999999999999998865 5
Q ss_pred CeeeEEEEeccCCCHHHhhcccccc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEE
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAA-----QELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
...++++||+++++|.+++...... ..+++.+++.++.+++.||+|||+. +++|+||||+||++++++.+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEE
Confidence 6789999999999999998654322 4689999999999999999999998 9999999999999999999999
Q ss_pred eeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccc
Q 016009 273 ADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELD 349 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 349 (397)
+|||+++.+...... .....++..|+|||++.+..++.++||||||+++||+++ |+.||.......... ...
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~ 233 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA-----YLK 233 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-----HHH
Confidence 999999865433221 122345678999999988889999999999999999999 999986433211000 000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. ......+ ...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 234 ~--~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 234 D--GYRLAQP----INCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred c--CCCCCCC----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 0 0011111 122346889999999999999999999999885
No 173
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.9e-42 Score=322.20 Aligned_cols=260 Identities=21% Similarity=0.310 Sum_probs=200.8
Q ss_pred HHHHHHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec
Q 016009 118 DEIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH 196 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 196 (397)
.++....++|+..+.||+|+||.||++... +++.+|+|.+..... ......+.+.+|+.+++.++||||+++++++..
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 344555689999999999999999999665 688999999753111 111224567889999999999999999999999
Q ss_pred CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeec
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 276 (397)
++..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 99999999999999999998643 478888999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCC-CcccccccccccCcccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 016009 277 IAKFLKPDSS-NWTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 277 ~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--------~~~~i 259 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKI 259 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH--------HHHHH
Confidence 9987643322 22345799999999998754 37889999999999999999999987433211 01111
Q ss_pred cCC--CCCCCCcchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHh
Q 016009 352 LDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPES--RPTMKIVSQQL 395 (397)
Q Consensus 352 ~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~~vl~~L 395 (397)
... .+..+. .......+.+++..|++.++.+ ||++++++++.
T Consensus 260 ~~~~~~~~~~~--~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 260 MNHKNSLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HcCCCcccCCC--cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111 111111 1123445788899999844443 78999998763
No 174
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.1e-41 Score=307.43 Aligned_cols=249 Identities=26% Similarity=0.421 Sum_probs=202.0
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.+|+..+.||+|++|.||++.. .+++.||+|.+..... ...+.+.+|+.+++.++|+|++++++++..++..++|
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 5788889999999999999965 5799999999864221 2346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++.. ..+++.++..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 95 MEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred ecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 999999999999854 2478999999999999999999998 999999999999999999999999999876554
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........+++.|+|||...+..++.++|+||||+++|++++|+.||............ .....+... ..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-----~~~~~~~~~----~~ 238 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-----ATNGTPELQ----NP 238 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-----ccCCCCCCC----Cc
Confidence 433334456888999999999888999999999999999999999998643221110000 000001111 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
......+.+++.+||+.+|++||+++++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 223345788999999999999999999986
No 175
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.8e-41 Score=305.05 Aligned_cols=251 Identities=24% Similarity=0.377 Sum_probs=197.4
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|++++++++|||++++++++...+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT---VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC---hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 577788999999999999964 5789999999864221 223467899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|..+. .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 79 EFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred ecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999999997542 377888999999999999999998 9999999999999999999999999999765432
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||........... .......+.++..+... ..
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~ 223 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-PLQLLQCIVDEDPPVLP--VG 223 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-hHHHHHHHhccCCCCCC--CC
Confidence 22335789999999999988899999999999999999999999864322110000 00001111111111100 01
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+|++.+|++||+++|++++
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 123458899999999999999999999875
No 176
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5e-41 Score=301.84 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=189.5
Q ss_pred cccccCcEEEEEEEeCC---CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 132 CIGNGGHGSVYRAELPS---GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
.||+|+||.||+|...+ +..+++|.++.... ......+.+|+.++++++||||+++++++.+....++||||++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS---VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 58999999999997543 45799998865322 1234578899999999999999999999999999999999999
Q ss_pred CCCHHHhhccccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 209 RGSLAAILSSDAA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 209 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+|+|.+++..... ....++..+..++.|++.|++|||+. +++|+||||+||+++.+++++|+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 9999999965432 23467788889999999999999998 999999999999999999999999999875432221
Q ss_pred C--cccccccccccCcccccCC-------CCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 016009 287 N--WTEFAGTYGYVAPELAYTM-------KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356 (397)
Q Consensus 287 ~--~~~~~g~~~y~aPE~~~~~-------~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (397)
. .....++..|+|||++.+. .++.++|+||||+++|||++ |+.||.....................++..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL 235 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc
Confidence 1 1224567889999987642 35789999999999999996 999986433211000000000011111111
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.. .....+.+++..|| .+|++|||++||++.|+
T Consensus 236 ~~------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 KL------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CC------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 10 12234778888999 58999999999999885
No 177
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.8e-42 Score=310.95 Aligned_cols=257 Identities=25% Similarity=0.426 Sum_probs=202.1
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEE
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFC 194 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 194 (397)
...++|+..+.||+|+||.||++... +...+|+|.+..... ......+.+|+++++++ +|+||+++++++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC---HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34457888899999999999999653 236799998875322 12346688999999999 899999999999
Q ss_pred ecCCeeeEEEEeccCCCHHHhhccc-------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCc
Q 016009 195 SHARHSFLVYEFLKRGSLAAILSSD-------------AAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN 261 (397)
Q Consensus 195 ~~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 261 (397)
..++..+++|||+++|+|.+++... .....+++..++.++.|++.||+|||+. +++|+||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccceee
Confidence 9999999999999999999998643 1234689999999999999999999998 99999999999
Q ss_pred EEeCCCCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccc
Q 016009 262 LLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSIS 338 (397)
Q Consensus 262 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~ 338 (397)
|++++++.+||+|||++......... .....++..|+|||...+..++.++|||||||++|||++ |..||.......
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 99999999999999999865433211 122234678999999988889999999999999999998 988875332111
Q ss_pred ccccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 339 SSFLNTDIELDEMLDP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 339 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. ...+... ....+. .....+.+++.+||+.||++|||+.|+++.|+
T Consensus 243 ~--------~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~ 289 (293)
T cd05053 243 L--------FKLLKEGYRMEKPQ----NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLD 289 (293)
T ss_pred H--------HHHHHcCCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHHH
Confidence 0 0000010 111111 22345889999999999999999999999885
No 178
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.6e-41 Score=307.76 Aligned_cols=264 Identities=24% Similarity=0.391 Sum_probs=205.1
Q ss_pred ccHHHHHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEE
Q 016009 115 LVYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYG 192 (397)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~ 192 (397)
+.++.+..+.++|+..+.||+|+||.||++.. .+++.+++|.+.... .....+..|+.+++++ +|||++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~ 82 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYG 82 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeee
Confidence 44566677889999999999999999999965 468899999875311 1235678899999999 6999999999
Q ss_pred EEe-----cCCeeeEEEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC
Q 016009 193 FCS-----HARHSFLVYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL 266 (397)
Q Consensus 193 ~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 266 (397)
++. .++..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++|+||||+||++++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~ 159 (286)
T cd06638 83 MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTT 159 (286)
T ss_pred eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECC
Confidence 883 3457899999999999999875422 224588999999999999999999998 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCCcccccccccccCcccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc
Q 016009 267 EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF 341 (397)
Q Consensus 267 ~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~ 341 (397)
++.++|+|||++..............|+..|+|||++.. ..++.++||||+|+++|||++|+.|+..........
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 160 EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred CCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 999999999998866543333344568999999998753 447889999999999999999999986443211100
Q ss_pred cccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 342 LNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
. ......+....+. .....+.+++.+||+.||++|||+.|+++.+
T Consensus 240 ~-----~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 K-----IPRNPPPTLHQPE----LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred h-----ccccCCCcccCCC----CcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 0000011111111 1234588999999999999999999999875
No 179
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.1e-41 Score=307.40 Aligned_cols=256 Identities=24% Similarity=0.417 Sum_probs=201.7
Q ss_pred hcCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 197 (397)
.++|+..+.||+|+||.||++... ++..||+|.+..... ....+++.+|+.++++++|||++++++++..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC---HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 467888999999999999999753 467899999864222 22356789999999999999999999999999
Q ss_pred CeeeEEEEeccCCCHHHhhcccc-------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCC
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDA-------------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDIS 258 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 258 (397)
...++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++|+|||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~ 157 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLA 157 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccccc
Confidence 99999999999999999986432 112478899999999999999999998 99999999
Q ss_pred CCcEEeCCCCcEEEeeeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccc
Q 016009 259 SKNLLLDLEFEAHVADFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLS 335 (397)
Q Consensus 259 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~ 335 (397)
|+||++++++.++|+|||++........ .......+..|+|||...+..++.++||||||+++|||++ |..||....
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999875432221 1112234667999999988899999999999999999998 888875332
Q ss_pred cccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 336 SISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.. .....+.+....... ...+..+.+++.+||+.+|++|||+.|+++.||
T Consensus 238 ~~--------~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 238 HE--------EVIYYVRDGNVLSCP---DNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HH--------HHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 11 111111111111101 122356889999999999999999999999987
No 180
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.5e-41 Score=303.46 Aligned_cols=252 Identities=26% Similarity=0.470 Sum_probs=200.6
Q ss_pred cCCCCCccccccCcEEEEEEEeC-C---CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-S---GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
.+|++.+.||+|+||.||+|... + +..+|+|.++.... ....+.+..|+.++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT---EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 46778899999999999999653 2 33799999864322 12356789999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 99999999999999997543 3589999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCCc---ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-C
Q 016009 281 LKPDSSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-R 355 (397)
Q Consensus 281 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 355 (397)
........ ....++..|+|||.+.+..++.++|+||||+++||+++ |..||....... ....+.+. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~ 227 (267)
T cd05066 156 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--------VIKAIEEGYR 227 (267)
T ss_pred cccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--------HHHHHhCCCc
Confidence 65432211 11223568999999998889999999999999999887 999986433211 01111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+.+. ..+..+.+++.+|++.+|++||++.++++.|+
T Consensus 228 ~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 228 LPAPM----DCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CCCCC----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 11111 22345889999999999999999999999885
No 181
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-43 Score=319.16 Aligned_cols=247 Identities=30% Similarity=0.441 Sum_probs=202.8
Q ss_pred CCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|...+.||.|+||.||.+. ..+.+.||||++.-..+. ....-++++.|+..|++++|||.+.+-|+|..+...|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ-s~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccc-cHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4556779999999999995 457889999999753332 22335789999999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
||- ||-.|++.-.. +++.+..+..|+.+.+.||+|||+. +.||||||+.|||+++.|.+||+|||.+....+.
T Consensus 107 YCl-GSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHh-ccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 995 58888876544 5788899999999999999999999 9999999999999999999999999999765543
Q ss_pred CCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 286 SNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
..++|||.|||||++. .++|+-++||||||++..||...++|.-.+..+..-+.. ..--.|.+.
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI-----AQNesPtLq----- 246 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-----AQNESPTLQ----- 246 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH-----HhcCCCCCC-----
Confidence 3468999999999876 578999999999999999999999996555443322211 111122332
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..++...+.+++..||++-|.+|||.++++++
T Consensus 247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 23667778999999999999999999999875
No 182
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-41 Score=310.22 Aligned_cols=256 Identities=25% Similarity=0.394 Sum_probs=199.6
Q ss_pred hcCCCCCccccccCcEEEEEEEeC--------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFC 194 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 194 (397)
.++|.+.+.||+|+||.||++... ++..+|+|.+..... .....++..|+++++.+ +||||+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT---EKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC---hHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 357888899999999999999642 235799999875321 22356788999999999 799999999999
Q ss_pred ecCCeeeEEEEeccCCCHHHhhccccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCc
Q 016009 195 SHARHSFLVYEFLKRGSLAAILSSDAA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN 261 (397)
Q Consensus 195 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 261 (397)
...+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +++|+||||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 999999999999999999999975421 13489999999999999999999998 99999999999
Q ss_pred EEeCCCCcEEEeeeccccccCCCCCCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccc
Q 016009 262 LLLDLEFEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSIS 338 (397)
Q Consensus 262 ill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~ 338 (397)
|++++++.++|+|||.+.......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~ 250 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 999999999999999987654322111 11223568999999998889999999999999999998 888875322110
Q ss_pred ccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 339 SSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+..... ..........+.+++.+||+.+|++|||+.+|++.|+
T Consensus 251 ---------~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 251 ---------LFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred ---------HHHHHHcCCC--CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 0000100100 0001123346889999999999999999999999885
No 183
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-41 Score=299.06 Aligned_cols=253 Identities=24% Similarity=0.298 Sum_probs=205.1
Q ss_pred CCCCCccccccCcEEEEEEEeCC-CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||.|.-|+||++++.+ +..+|+|++.+..-. ......+...|.+||+.++||.++.+++.++.+...+|+|
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~-~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLA-SRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHh-hhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 45667889999999999998764 589999998753221 1223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC-
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP- 283 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~- 283 (397)
|||+||+|..+.+.+.. +.+++..++-++.+|+-||+|||-. |||.|||||+|||+.++|++.|+||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999998876554 6799999999999999999999999 999999999999999999999999998753210
Q ss_pred --------------------------------CCC-----------------------CcccccccccccCcccccCCCC
Q 016009 284 --------------------------------DSS-----------------------NWTEFAGTYGYVAPELAYTMKI 308 (397)
Q Consensus 284 --------------------------------~~~-----------------------~~~~~~g~~~y~aPE~~~~~~~ 308 (397)
... .....+||-.|+|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 0123468999999999999999
Q ss_pred CcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC-
Q 016009 309 TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT- 387 (397)
Q Consensus 309 ~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt- 387 (397)
+.++|+|+|||++|||+.|..||..... .+.+..++-..+..+.. .+.+..+.+||.+.|.+||++|..
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~--------~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNN--------KETLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCc--------hhhHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccChhhhhcc
Confidence 9999999999999999999999864332 23344444444443322 145567999999999999999987
Q ss_pred ---HHHHHH
Q 016009 388 ---MKIVSQ 393 (397)
Q Consensus 388 ---~~~vl~ 393 (397)
+.||-+
T Consensus 383 ~rGA~eIK~ 391 (459)
T KOG0610|consen 383 KRGAAEIKR 391 (459)
T ss_pred ccchHHhhc
Confidence 666644
No 184
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5e-41 Score=302.38 Aligned_cols=254 Identities=24% Similarity=0.414 Sum_probs=197.6
Q ss_pred CCCCccccccCcEEEEEEEeCC----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe---
Q 016009 127 FDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH--- 199 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 199 (397)
|...+.||+|+||.||+|.... +..||+|.++..... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT--YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 4567889999999999996542 367999998753222 2235678999999999999999999998865544
Q ss_pred ---eeEEEEeccCCCHHHhhcccc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEe
Q 016009 200 ---SFLVYEFLKRGSLAAILSSDA---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVA 273 (397)
Q Consensus 200 ---~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 273 (397)
.++++||+++|+|..++.... ....+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEEC
Confidence 799999999999999985432 223589999999999999999999998 99999999999999999999999
Q ss_pred eeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccc
Q 016009 274 DFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350 (397)
Q Consensus 274 Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 350 (397)
|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||....... ....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--------~~~~ 227 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--------IYDY 227 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHH
Confidence 99999865433221 112234678999999988889999999999999999999 888876432211 1111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+.+..... ........+.+++.+||+.||++|||+.|+++.|+
T Consensus 228 ~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 228 LRHGNRLK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLE 270 (273)
T ss_pred HHcCCCCC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111110 01123456899999999999999999999999885
No 185
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.9e-41 Score=304.19 Aligned_cols=253 Identities=28% Similarity=0.403 Sum_probs=199.0
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||+|.. .+++.||+|.++.... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG----EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 4677788899999999999965 4688999999864221 2245678899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++.... .+++.+++.++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 85 MEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred EeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 99999999999986543 589999999999999999999998 999999999999999999999999999876544
Q ss_pred CCCCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
.........|+..|+|||.+. ...++.++|||||||++|||++|..|+............. ......+....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~-- 233 (267)
T cd06645 159 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT---KSNFQPPKLKD-- 233 (267)
T ss_pred cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh---ccCCCCCcccc--
Confidence 333334457899999999874 4568899999999999999999999975332211000000 00000111110
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+.+++.+|++.+|++|||+++|+++
T Consensus 234 --~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 234 --KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred --cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 01123458899999999999999999999864
No 186
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3e-41 Score=304.88 Aligned_cols=251 Identities=24% Similarity=0.458 Sum_probs=198.4
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCC----EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
.++|+..+.||+|+||+||+|.. .+|. .||+|.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~- 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS---PKANKEILDEAYVMAGVGSPYVCRLLGICLTS- 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC---HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-
Confidence 35788889999999999999964 4554 489999864322 22356788999999999999999999999754
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
..++++||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~ 156 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLA 156 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCce
Confidence 5789999999999999987543 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-
Q 016009 279 KFLKPDSSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP- 354 (397)
Q Consensus 279 ~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 354 (397)
+......... ....++..|+|||...+..++.++||||||+++|||++ |..||+...... ....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---------~~~~~~~~ 227 (279)
T cd05109 157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---------IPDLLEKG 227 (279)
T ss_pred eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHHCC
Confidence 8765332221 12234678999999998889999999999999999998 899986432110 0111111
Q ss_pred -CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 355 -RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 355 -~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+ ......+.+++.+||+.||++||++.++++.|+
T Consensus 228 ~~~~~~----~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 228 ERLPQP----PICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CcCCCC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 123456889999999999999999999998774
No 187
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.6e-41 Score=299.91 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=201.1
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec-CCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH-ARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv 203 (397)
+|+..+.||+|++|.||++... +++.|++|.+..... .....+.+.+|++++++++|+|++++.+.+.. ....+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence 4777889999999999999654 678999999864221 12235678899999999999999999998764 4467899
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++.... ...+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 79 MGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 99999999999997543 24589999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........+++.|+|||.+.+..++.++||||||+++++|++|+.||....... ....+.....+.. .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~~~---~ 223 (257)
T cd08223 155 QCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS--------LVYRIIEGKLPPM---P 223 (257)
T ss_pred cCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHhcCCCCC---c
Confidence 3333344568899999999999889999999999999999999999986322110 0011111111111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+|++.||++|||+.+++++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 2334568899999999999999999999874
No 188
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7.4e-41 Score=301.99 Aligned_cols=248 Identities=27% Similarity=0.431 Sum_probs=202.2
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.|+..+.||.|+||.||+|... +++.||+|.+..... ......+.+|++++++++|||++++++++.+....++||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 4666788999999999999754 688999998764221 123567899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.. .++++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 82 EYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred ecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 99999999999864 2488899999999999999999998 9999999999999999999999999999766543
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........++..|+|||.+.+..++.++|+||||+++|||+||+.|+.......... ...... +.....
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~---------~~~~~~--~~~~~~ 223 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF---------LIPKNN--PPTLTG 223 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh---------hhhcCC--CCCCch
Confidence 333334467889999999988889999999999999999999999986443211100 000000 111223
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 455678899999999999999999999875
No 189
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.5e-41 Score=310.43 Aligned_cols=253 Identities=27% Similarity=0.438 Sum_probs=196.3
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCC--EEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 200 (397)
++|++.+.||+|+||.||+|... ++. .+++|.+.... .......+.+|++++.++ +||||+++++++...+..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC---CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 57888899999999999999754 454 45777765321 122356788999999999 899999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC
Q 016009 201 FLVYEFLKRGSLAAILSSDAA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE 267 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 267 (397)
++||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +++||||||+||+++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 999999999999999865421 12578999999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccc
Q 016009 268 FEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDI 346 (397)
Q Consensus 268 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 346 (397)
+.+||+|||++....... .......+..|+|||...+..++.++||||||+++|||+| |..||.......
T Consensus 161 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------- 231 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------- 231 (303)
T ss_pred CcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--------
Confidence 999999999986422111 1111234567999999988889999999999999999998 999985332110
Q ss_pred ccccccCC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 347 ELDEMLDP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 347 ~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+... ....+. .....+.+++.+||+.+|++||++++++++|+
T Consensus 232 ~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 232 LYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred HHHHHhcCCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 00011010 111111 12345889999999999999999999998874
No 190
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.7e-41 Score=311.13 Aligned_cols=259 Identities=19% Similarity=0.269 Sum_probs=192.5
Q ss_pred Ccccccc--CcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 130 QYCIGNG--GHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 130 ~~~lg~G--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
.++||+| +|++||++.. .+|+.||+|++...... ....+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT--NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhcc--HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 4679999 7899999965 57899999998653221 12245677899999999999999999999999999999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+++|+|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++++||+..........
T Consensus 81 ~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 81 MAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred cCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999865432 3589999999999999999999998 999999999999999999999999986543321111
Q ss_pred -------CcccccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccccc-----
Q 016009 287 -------NWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML----- 352 (397)
Q Consensus 287 -------~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----- 352 (397)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||.....................
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0112346778999999875 45889999999999999999999998643221100000000000000
Q ss_pred --------------CCCC----------C-----CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 --------------DPRL----------P-----APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 --------------~~~~----------~-----~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+... + ............+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0000 0 0000112234568899999999999999999999863
No 191
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=9.9e-41 Score=298.58 Aligned_cols=239 Identities=23% Similarity=0.392 Sum_probs=187.0
Q ss_pred cccccCcEEEEEEEeCC-------------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 132 CIGNGGHGSVYRAELPS-------------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
.||+|+||.||+|...+ ...|++|.+... .......+.+|+.+++.++||||+++++++..+.
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 58999999999997532 225888887642 2223467889999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc-------EE
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE-------AH 271 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-------~k 271 (397)
..++||||+++|+|..++.... ..+++..++.++.|+++||+|||+. +++||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999999886543 3589999999999999999999998 9999999999999987664 89
Q ss_pred EeeeccccccCCCCCCcccccccccccCccccc-CCCCCcchhhHHHHHHHHHHH-hCCCCCCccccccccccccccccc
Q 016009 272 VADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVI-KGKHPRDFLSSISSSFLNTDIELD 349 (397)
Q Consensus 272 l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~-tg~~p~~~~~~~~~~~~~~~~~~~ 349 (397)
++|||++...... ....++..|+|||.+. +..++.++||||||+++|||+ +|..|+....... ..
T Consensus 153 l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---------~~ 219 (262)
T cd05077 153 LSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE---------KE 219 (262)
T ss_pred eCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH---------HH
Confidence 9999998654322 2345778899999886 466899999999999999998 5888865322110 00
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
........... .....+.+++.+||+.||++||++.+|++.|+
T Consensus 220 ~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQCMLVT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcCccCCC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 11111111111 11245889999999999999999999999874
No 192
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.6e-41 Score=313.92 Aligned_cols=256 Identities=24% Similarity=0.411 Sum_probs=197.2
Q ss_pred hcCCCCCccccccCcEEEEEEEe------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEec
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSH 196 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 196 (397)
.++|+..+.||+|+||.||+|.. .+++.||||+++.... ......+.+|+.++.++ +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC---hHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 45788999999999999999953 3578999999875322 12246788999999999 68999999998865
Q ss_pred C-CeeeEEEEeccCCCHHHhhccccc------------------------------------------------------
Q 016009 197 A-RHSFLVYEFLKRGSLAAILSSDAA------------------------------------------------------ 221 (397)
Q Consensus 197 ~-~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------ 221 (397)
. ...+++|||+++|+|.+++.....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 4 467899999999999999864210
Q ss_pred ----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC--cc
Q 016009 222 ----------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN--WT 289 (397)
Q Consensus 222 ----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~ 289 (397)
...+++.++..++.|++.||+|||+. +++||||||+||++++++++||+|||++......... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 239 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG 239 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcC
Confidence 12378889999999999999999998 9999999999999999999999999998765332221 12
Q ss_pred cccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CCCCCCCcchHHHH
Q 016009 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD-PRLPAPSRSVQEKL 367 (397)
Q Consensus 290 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 367 (397)
...++..|+|||.+.+..++.++||||||+++|||++ |..||........ ....+.+ .....+.. ..
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~----~~ 308 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------FCRRLKEGTRMRAPDY----TT 308 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-------HHHHHhccCCCCCCCC----CC
Confidence 2345678999999988889999999999999999997 8989754321100 0000000 01111111 12
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 368 RSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 368 ~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+++..||+.||++|||+.+|+++|+
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 35889999999999999999999999986
No 193
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.9e-41 Score=305.88 Aligned_cols=248 Identities=27% Similarity=0.419 Sum_probs=199.7
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 355567799999999999965 4678999998764221 123567899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.. ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 82 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 82 EYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence 99999999998854 3588999999999999999999998 9999999999999999999999999999866543
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........++..|+|||++.+..++.++||||||+++|||++|+.|+.......... .+.....+ ....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--------~~~~~~~~---~~~~ 223 (277)
T cd06642 155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF--------LIPKNSPP---TLEG 223 (277)
T ss_pred chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh--------hhhcCCCC---CCCc
Confidence 333334467889999999998889999999999999999999999976432211100 00001111 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.+|++|||+.+++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 234568899999999999999999999975
No 194
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.7e-41 Score=314.43 Aligned_cols=260 Identities=23% Similarity=0.354 Sum_probs=195.2
Q ss_pred HhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC---
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR--- 198 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--- 198 (397)
..++|...+.||+|+||.||++.. .+|+.||+|++...... ......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN--QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc--hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 346899999999999999999965 46899999998653222 223567889999999999999999999986443
Q ss_pred ---eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 199 ---HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 199 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 46999999976 5655553 2478899999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-------------cc
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-------------FL 342 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-------------~~ 342 (397)
|++...... .......+|..|+|||.+.+..++.++||||||+++|||++|+.||......... ..
T Consensus 168 g~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 168 GLARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CCccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 999754322 2223457899999999999999999999999999999999999998643211000 00
Q ss_pred cc-ccccccccC--CCCC--------------CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 343 NT-DIELDEMLD--PRLP--------------APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 343 ~~-~~~~~~~~~--~~~~--------------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.. ......... +..+ ............+.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 000000000 0000 0000001123457899999999999999999999875
No 195
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.7e-41 Score=300.47 Aligned_cols=258 Identities=29% Similarity=0.446 Sum_probs=204.9
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||.|+||+||+|.. .++..+++|++....... ..+.+.+|+++++.++|+|++++++.+..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence 4688899999999999999975 468899999986422211 467899999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.+++........+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..+..
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 99999999999997644334689999999999999999999998 999999999999999999999999999877654
Q ss_pred CCCC----cccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 016009 284 DSSN----WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358 (397)
Q Consensus 284 ~~~~----~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
.... .....++..|+|||.+... .++.++|+||||+++|||++|+.||............ .. ...+....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~----~~-~~~~~~~~ 229 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLT----LQ-NDPPSLET 229 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHH----hc-CCCCCcCC
Confidence 3322 1334688899999998876 7899999999999999999999998754332100000 00 00111111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 359 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. .........+.+++.+||+.||++|||+++++++
T Consensus 230 ~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 230 G-ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred c-cccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 0012334568899999999999999999999864
No 196
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.6e-41 Score=300.72 Aligned_cols=255 Identities=29% Similarity=0.439 Sum_probs=204.5
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+..+.||+|+||.||++... +++.+++|.+..... ...+.+.+|++++++++|||++++++++...+..++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch----hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEE
Confidence 357888899999999999999654 678899999864322 245788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
+|||+++++|.+++.... ..+++.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 78 ~~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred EEeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhh
Confidence 999999999999986542 3589999999999999999999998 99999999999999999999999999987655
Q ss_pred CCCCCcccccccccccCcccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTM---KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
..........++..|+|||...+. .++.++||||||+++|||+||+.|+............ .......+..
T Consensus 153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~---~~~~~~~~~~--- 226 (262)
T cd06613 153 ATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI---SKSNFPPPKL--- 226 (262)
T ss_pred hhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhccCCCccc---
Confidence 433233445678899999998776 7899999999999999999999998643321111000 0000000111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.........+.+++.+||+.+|.+|||+.+|+.+
T Consensus 227 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 -KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred -cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1122345668999999999999999999999863
No 197
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.2e-41 Score=300.77 Aligned_cols=252 Identities=21% Similarity=0.310 Sum_probs=202.7
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|+||.+|++.. .+|+.|++|.+..... .....+++.+|++++++++||||+++++++...+..++|+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEE
Confidence 477788999999999999965 4789999999864221 1223567899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++..... ..+++.+++.++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 79 DYCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred ecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 99999999999865432 3578999999999999999999998 9999999999999999999999999999866543
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........+++.|+|||...+..++.++|+||||+++++|++|+.|+...... .....+.....+.. ..
T Consensus 155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~---~~ 223 (256)
T cd08218 155 VELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--------NLVLKIIRGSYPPV---SS 223 (256)
T ss_pred hhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--------HHHHHHhcCCCCCC---cc
Confidence 33333456788999999999888999999999999999999999997532210 01111111111111 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.+|++||++.+|+++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 234468899999999999999999999875
No 198
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.7e-41 Score=299.91 Aligned_cols=248 Identities=27% Similarity=0.437 Sum_probs=197.7
Q ss_pred ccccccCcEEEEEEEeCC--C--CEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 131 YCIGNGGHGSVYRAELPS--G--QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.+..|++++++++||||+++++++.. ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEe
Confidence 358999999999997543 3 36999998753322 346789999999999999999999999988 889999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+++++|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 77 APLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred cCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999999976543 4689999999999999999999998 999999999999999999999999999987654322
Q ss_pred C---cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 287 N---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 287 ~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
. .....++..|+|||...+..++.++||||||+++|||++ |+.||........... ... .......+
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-----~~~-~~~~~~~~--- 223 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK-----IDK-EGERLERP--- 223 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHh-cCCcCCCC---
Confidence 1 112356788999999998889999999999999999999 9999864332110000 000 00111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 224 -~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 -EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 123356889999999999999999999999885
No 199
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.5e-41 Score=304.21 Aligned_cols=250 Identities=25% Similarity=0.404 Sum_probs=197.2
Q ss_pred CCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|+||.||+|... ++..+++|.+... .....+.+.+|+++++.++|||++++++++..++..++|+|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC----CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 556778999999999999765 5778899887542 12235678899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++++|..++.... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 83 FCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred ecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 999999998876432 3589999999999999999999998 99999999999999999999999999987654333
Q ss_pred CCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 286 SNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
.......++..|+|||++. +..++.++|||||||++|||++|+.||........... ......+....+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~- 231 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLK-----IAKSEPPTLAQP- 231 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHH-----HhhcCCCCCCCc-
Confidence 3334456889999999874 34578899999999999999999999864332110000 000001111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.||++|||+.+++++
T Consensus 232 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 232 ---SRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1223468899999999999999999999864
No 200
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7e-41 Score=304.49 Aligned_cols=252 Identities=25% Similarity=0.414 Sum_probs=199.4
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+.|++.+.||+|+||.||+|... +++.+++|.+... .....+.+..|+++++.++|||++++++++..++..++|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 46888899999999999999764 5889999998642 223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|..++.+.. ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 88 IEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred EecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 99999999998875433 3589999999999999999999998 999999999999999999999999999875433
Q ss_pred CCCCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
.........++..|+|||++. ...++.++||||||+++|||++|+.||......... ........+....
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~ 237 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-----LKIAKSEPPTLSQ 237 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH-----HHHhcCCCccCCC
Confidence 333334456788999999875 345688999999999999999999998643321100 0000001111111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 359 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+ ......+.+++.+||+.||++||+++++++.
T Consensus 238 ~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 238 P----SKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred C----cccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1 1233458899999999999999999999863
No 201
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-41 Score=319.31 Aligned_cols=260 Identities=25% Similarity=0.337 Sum_probs=196.2
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC-----e
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR-----H 199 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~ 199 (397)
+|+..+.||+|+||.||++.. .+|+.||+|++..... .....+.+.+|+++++.++||||+++++++...+ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc--chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence 477889999999999999975 4789999999864222 2223567889999999999999999999998776 7
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++|+||+. ++|.+.+... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEEEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccccee
Confidence 899999996 5787777543 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCC-CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-----cc--ccc----
Q 016009 280 FLKPDSS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-----LN--TDI---- 346 (397)
Q Consensus 280 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-----~~--~~~---- 346 (397)
....... ......++..|+|||.+.+. .++.++||||+||++|||++|+.||.......... .. ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 6543322 22334678899999998764 47899999999999999999999986433211000 00 000
Q ss_pred ---ccc-cccCCCCCCCC-----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ---ELD-EMLDPRLPAPS-----RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ---~~~-~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
... .+.......+. ....+....+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000 00000000000 0001123468899999999999999999999864
No 202
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.9e-41 Score=299.29 Aligned_cols=245 Identities=30% Similarity=0.467 Sum_probs=193.4
Q ss_pred ccccccCcEEEEEEEeC--C--CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 131 YCIGNGGHGSVYRAELP--S--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
+.||+|+||.||+|... + +..+|+|.+...... ...+++..|+++++.++|+|++++++++. .+..++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEe
Confidence 36999999999999643 2 268999998753222 24567899999999999999999999876 4567999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+++|+|.+++.... .+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 77 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 77 APLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 99999999997644 589999999999999999999998 999999999999999999999999999986644332
Q ss_pred Ccc---cccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 287 NWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 287 ~~~---~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
... ...++..|+|||...+..++.++||||||+++|||++ |..||+.......... .... .....+
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~-----~~~~--~~~~~~--- 220 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAM-----LESG--ERLPRP--- 220 (257)
T ss_pred ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHH-----HHcC--CcCCCC---
Confidence 211 1123467999999998889999999999999999998 9999865432110000 0000 001111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 221 -~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 221 -EECPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253 (257)
T ss_pred -CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 122346889999999999999999999999886
No 203
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=317.52 Aligned_cols=258 Identities=26% Similarity=0.444 Sum_probs=212.5
Q ss_pred HHHHHHHhcCCCCCccccccCcEEEEEEEeCC-CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe
Q 016009 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS 195 (397)
Q Consensus 117 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 195 (397)
++.|+-...+....++||-|.||.||.|.++. .-.||||.++.+ .-..++|+.|+.+|+.++|||+|+++|+|.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-----tMeveEFLkEAAvMKeikHpNLVqLLGVCT 333 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 333 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-----chhHHHHHHHHHHHHhhcCccHHHHhhhhc
Confidence 35566555667777899999999999998764 567999998752 234789999999999999999999999999
Q ss_pred cCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 196 HARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 196 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
.+...|||.|||..|+|.++|++... ..++--..+.++.||+.||.||..+ ++|||||.++|+|+.++..+|++||
T Consensus 334 ~EpPFYIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 334 HEPPFYIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred cCCCeEEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeecc
Confidence 99999999999999999999986543 4577778899999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCcc-cccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC
Q 016009 276 GIAKFLKPDSSNWT-EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD 353 (397)
Q Consensus 276 g~~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
|+++++..+....+ ...-.+.|.|||-+....++.|+|||+|||+|||+.| |..||.....- .+..++.
T Consensus 410 GLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS---------qVY~LLE 480 (1157)
T KOG4278|consen 410 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---------QVYGLLE 480 (1157)
T ss_pred chhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH---------HHHHHHh
Confidence 99999875543322 1223678999999999999999999999999999999 88887643221 1122222
Q ss_pred C--CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 354 P--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 354 ~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. ++..+ ..++..+.+|+..||+.+|.+||++.|+-+.+|
T Consensus 481 kgyRM~~P----eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 481 KGYRMDGP----EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred ccccccCC----CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 2 22222 345567999999999999999999999988775
No 204
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.6e-42 Score=321.22 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=194.5
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||++... +++.||+|++..... ........+..|+.++.+++||||+++++.+.+.+..++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM-LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 46888899999999999999654 689999999864211 1112346788899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 80 MEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred EeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999986543 489999999999999999999998 999999999999999999999999999875422
Q ss_pred CCC-----------------------------------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCC
Q 016009 284 DSS-----------------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 328 (397)
Q Consensus 284 ~~~-----------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~ 328 (397)
... ......||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 100 011346899999999999999999999999999999999999
Q ss_pred CCCCccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 016009 329 HPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT---MKIVSQQ 394 (397)
Q Consensus 329 ~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~~vl~~ 394 (397)
.||........ ...+.. .....+... .....+.+++.+++. ||++|++ +++++++
T Consensus 234 ~Pf~~~~~~~~--------~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 234 PPFCSETPQET--------YRKVMNWKETLVFPPEV--PISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCCHHHH--------HHHHHcCCCceecCCCC--CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 99864332110 011111 111111110 112346677777664 9999985 6777653
No 205
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-41 Score=307.56 Aligned_cols=255 Identities=24% Similarity=0.416 Sum_probs=200.4
Q ss_pred hcCCCCCccccccCcEEEEEEEe--------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL--------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFC 194 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 194 (397)
.++|.+.+.||+|+||.||++.. .++..||+|.+..... ....+.+.+|+.+++.+ +||||+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc---hHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 45677889999999999999963 1345799998764221 22356789999999999 899999999999
Q ss_pred ecCCeeeEEEEeccCCCHHHhhccccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCc
Q 016009 195 SHARHSFLVYEFLKRGSLAAILSSDAA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN 261 (397)
Q Consensus 195 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 261 (397)
......++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +++|+||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 999999999999999999999875321 13588999999999999999999998 99999999999
Q ss_pred EEeCCCCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccc
Q 016009 262 LLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSIS 338 (397)
Q Consensus 262 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~ 338 (397)
|++++++.+||+|||++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+.......
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 247 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 99999999999999999866432221 122345678999999988889999999999999999998 788875332211
Q ss_pred ccccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 339 SSFLNTDIELDEMLDP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 339 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+... ....+ ......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 248 --------~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~ 294 (304)
T cd05101 248 --------LFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLD 294 (304)
T ss_pred --------HHHHHHcCCcCCCC----CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 00011011 11111 123456889999999999999999999999885
No 206
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=6.5e-41 Score=306.90 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=199.6
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||++... ++..+++|.+..... .....++.+|++++++++||||+++++++..++..++|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK---PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEE
Confidence 36888899999999999999654 688899998764222 22356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ +++|+||||+||+++.++.++|+|||++.....
T Consensus 78 ~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 78 MEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred eeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 9999999999999754 35889999999999999999999732 899999999999999999999999999875432
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-cccc-c---------------
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-LNTD-I--------------- 346 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-~~~~-~--------------- 346 (397)
.. .....++..|+|||.+.+..++.++|+||||+++|||++|+.||.......... .... .
T Consensus 153 ~~--~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 153 SM--ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred cc--cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCC
Confidence 21 233568899999999988889999999999999999999999975322110000 0000 0
Q ss_pred -----------ccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 -----------ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+.....+ ..........+.+++.+||+.||++|||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPP--KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCc--cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 00001133468899999999999999999999875
No 207
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3e-41 Score=305.02 Aligned_cols=253 Identities=26% Similarity=0.437 Sum_probs=202.0
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|++.+.||.|+||.||++... ++..+|+|.+... .....+.+..|++++++++|||++++++++..+...++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Confidence 456888899999999999999764 6889999998642 22235678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+++++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 80 v~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 80 LIEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred EeeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 999999999999986543 3589999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCCCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 283 PDSSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
..........++..|+|||.+. ...++.++|+||||+++|||++|+.||.......... .......+.+.
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~ 229 (280)
T cd06611 155 STLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLL-----KILKSEPPTLD 229 (280)
T ss_pred ccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHH-----HHhcCCCCCcC
Confidence 4433334456889999999875 3446789999999999999999999986543211000 00000011111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+ ......+.+++..||+.+|++||+++++++.
T Consensus 230 ~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 230 QP----SKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred Cc----ccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 11 1233458899999999999999999999874
No 208
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.7e-41 Score=300.32 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=200.8
Q ss_pred CCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCc--chhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSD--QIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+|...+.||+|+||.||+|...+++.+|+|.+....... .......+.+|++++++++|+||+++++++...+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 467788899999999999988889999999986532211 122345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999996543 478999999999999999999998 999999999999999999999999999876432
Q ss_pred CC------CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 284 DS------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 284 ~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
.. .......++..|+|||...+..++.++||||||+++|+|++|+.||............. ......+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~ 231 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG---AHRGLMPRLP 231 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh---hccCCCCCCC
Confidence 11 11123467889999999998889999999999999999999999986433211100000 0000011111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
......+.+++.+||+.+|++||++.++++
T Consensus 232 ------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 232 ------DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ------CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 123345889999999999999999999986
No 209
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.6e-41 Score=299.26 Aligned_cols=247 Identities=26% Similarity=0.426 Sum_probs=196.9
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEE-ecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFC-SHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv 203 (397)
++|...+.||+|+||.||++... |..+++|.++.. ...+.+.+|+.++++++|+|++++++++ ..++..+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 46788899999999999999764 778999987542 1246789999999999999999999976 455678999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++..... ..+++..++.++.+++.||+|||+. +++|+||||+||++++++.+||+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 999999999999875442 3588999999999999999999998 999999999999999999999999999875432
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.. ....++..|+|||+..+..++.++||||||+++|||++ |+.||....... ....+..... ...
T Consensus 155 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---------~~~~~~~~~~--~~~ 220 (256)
T cd05082 155 TQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---------VVPRVEKGYK--MDA 220 (256)
T ss_pred cC---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---------HHHHHhcCCC--CCC
Confidence 22 22344568999999998889999999999999999998 999975322110 0000000000 000
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 221 PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 1123346889999999999999999999999886
No 210
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.3e-40 Score=301.53 Aligned_cols=259 Identities=23% Similarity=0.391 Sum_probs=199.1
Q ss_pred CCCCCccccccCcEEEEEEEe-----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--C
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--R 198 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~ 198 (397)
.|...+.||+|+||.||++.. .++..||+|.++.... ......+.+|++++++++|||++++.+++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 467788999999999999963 3578899999865322 22346789999999999999999999998765 5
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 6899999999999999986543 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCC---cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc---cccc----cc
Q 016009 279 KFLKPDSSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL---NTDI----EL 348 (397)
Q Consensus 279 ~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~---~~~~----~~ 348 (397)
......... .....++..|+|||.+.+..++.++||||||+++|||+|++.|............ ..+. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 866533221 1234567789999999888899999999999999999998876432111000000 0000 00
Q ss_pred ccccCC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 349 DEMLDP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 349 ~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+. ..+.+ ...+..+.+++.+||+.+|++|||++++++.|+
T Consensus 237 ~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 281 (284)
T cd05079 237 RVLEEGKRLPRP----PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFE 281 (284)
T ss_pred HHHHcCccCCCC----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 000011 11111 123456899999999999999999999999886
No 211
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.1e-41 Score=302.40 Aligned_cols=252 Identities=27% Similarity=0.363 Sum_probs=187.2
Q ss_pred cccccCcEEEEEEEeCC---CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 132 CIGNGGHGSVYRAELPS---GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
.||+|+||.||+|...+ ...+++|.+.... .......+.+|+++++.++||||+++++++......++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC---ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999996543 3468888765422 12234678899999999999999999999999999999999999
Q ss_pred CCCHHHhhccccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 209 RGSLAAILSSDAA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 209 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+|+|.+++..... ....++.....++.|++.|++|||+. +++||||||+||++++++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 9999999976542 22356888899999999999999998 999999999999999999999999999865432221
Q ss_pred --CcccccccccccCcccccC-------CCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCC
Q 016009 287 --NWTEFAGTYGYVAPELAYT-------MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRL 356 (397)
Q Consensus 287 --~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (397)
......++..|+|||+... ..++.++||||||+++|||++ |..||........... ... ..+..+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~----~~~-~~~~~~ 230 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQ----VVR-EQDIKL 230 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHH----Hhh-ccCccC
Confidence 1122345678999998642 356889999999999999999 7888764322110000 000 001111
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+.+ .........+.+++..|| .||++|||+++|++.|.
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKP-QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCC-cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111 111123345677888898 59999999999999874
No 212
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=295.45 Aligned_cols=262 Identities=25% Similarity=0.393 Sum_probs=201.6
Q ss_pred hcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec-----C
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH-----A 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~ 197 (397)
...|...+.||+|+||.|+.+. ..+|+.||||++..... .....+...+|+++|+.++|+||+.+.+.+.. -
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~--~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE--NQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhh--chHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 3455557889999999999995 45899999999875333 33457788999999999999999999998844 4
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
+..|+|+|+| ..+|...++.+. .++......++.|+++||.|+|+. +|+||||||+|++++.+..+||+|||+
T Consensus 99 ~DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 6789999999 569999997653 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC--CCCcccccccccccCccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------cccccc
Q 016009 278 AKFLKPD--SSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------LNTDIE 347 (397)
Q Consensus 278 ~~~~~~~--~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------~~~~~~ 347 (397)
|+..... ....+..+.|..|.|||++. ...|+...||||.||++.||++|++-|.....+.+-. ...++.
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 9987542 23346678899999999765 5679999999999999999999998876443321000 000111
Q ss_pred ccc--------ccCCCCCCCCcc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 348 LDE--------MLDPRLPAPSRS----VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 348 ~~~--------~~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+.. .+......+... .+.......+|+.+||..||.+|+|++|.+++
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111 111111111111 11223457789999999999999999999874
No 213
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1e-40 Score=297.55 Aligned_cols=251 Identities=27% Similarity=0.477 Sum_probs=200.3
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.+|+..+.||+|+||.||++...+++.+++|.+.... ....++.+|++++++++|||++++++++......++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-----MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-----CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 4677788999999999999987778899999876422 22467899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.... ..+++..++.++.+++.|++|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 79 EFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred EcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 9999999999986543 3588999999999999999999998 9999999999999999999999999998755322
Q ss_pred CCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 285 SSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 285 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
... .....++..|+|||...+..++.++||||||+++|||++ |+.||....... .. ..+...... ..+.
T Consensus 154 ~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~---~~~~~~~~~--~~~~-- 224 (256)
T cd05112 154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--VV---ETINAGFRL--YKPR-- 224 (256)
T ss_pred cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HH---HHHhCCCCC--CCCC--
Confidence 111 112234678999999998889999999999999999998 999986332110 00 000000000 0011
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+++.+||+.+|++|||+.+++++|+
T Consensus 225 --~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 --LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12345889999999999999999999999874
No 214
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4e-41 Score=302.42 Aligned_cols=251 Identities=28% Similarity=0.539 Sum_probs=199.4
Q ss_pred CCCCCccccccCcEEEEEEEeC-CC---CEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SG---QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
+|+..+.||+|+||.||+|... ++ ..|++|.+.... ......+|..|+.++++++||||+++++++..+...+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 5677889999999999999764 33 369999986532 2233578999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+||||+++++|.+++.... ..+++.+++.++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999987543 3589999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCC--cc-ccc--ccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccc-cCC
Q 016009 282 KPDSSN--WT-EFA--GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEM-LDP 354 (397)
Q Consensus 282 ~~~~~~--~~-~~~--g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 354 (397)
...... .. ... .+..|+|||.+.+..++.++||||||+++||+++ |..||........ ...+ .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~--------~~~i~~~~ 228 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV--------INAIEQDY 228 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHH--------HHHHHcCC
Confidence 432221 11 111 2457999999998899999999999999999886 9999864332110 0000 011
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+. +.+..+.+++..||+.+|++||++++|+..|+
T Consensus 229 ~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 229 RLPPPM----DCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred cCCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 23445889999999999999999999999886
No 215
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=9e-41 Score=299.80 Aligned_cols=251 Identities=28% Similarity=0.459 Sum_probs=199.8
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcc-----hhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQ-----IVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
|...+.||+|++|.||+|.. .+++.+|+|.+........ ....+.+.+|++++++++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 56678899999999999965 4688999998865333221 11235688999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+++|||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||.+..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999996543 588999999999999999999998 999999999999999999999999999886
Q ss_pred cCCCCC------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 016009 281 LKPDSS------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354 (397)
Q Consensus 281 ~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
...... ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||.......... .......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~ 230 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF-----KIGENASP 230 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH-----HHhccCCC
Confidence 653211 1122457889999999998889999999999999999999999987543211100 00111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+ ......+.+++.+||+.||++||++.++++.
T Consensus 231 ~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 231 EIP------SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred cCC------cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 111 1233558899999999999999999999864
No 216
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.3e-41 Score=300.71 Aligned_cols=239 Identities=21% Similarity=0.377 Sum_probs=185.3
Q ss_pred cccccCcEEEEEEEeCC-------------------------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc
Q 016009 132 CIGNGGHGSVYRAELPS-------------------------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN 186 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n 186 (397)
.||+|+||.||+|.... ...|++|.+... .......+.+|+.+++.++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS----HRDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH----HHHHHHHHHHHHHHHhcCCCCC
Confidence 59999999999996421 135888887542 1223457888999999999999
Q ss_pred eeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC
Q 016009 187 IVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL 266 (397)
Q Consensus 187 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 266 (397)
|+++++++......++||||+++|+|..++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~ 152 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLAR 152 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEec
Confidence 9999999999999999999999999999986533 3588999999999999999999998 9999999999999976
Q ss_pred CC-------cEEEeeeccccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHH-hCCCCCCccccc
Q 016009 267 EF-------EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVI-KGKHPRDFLSSI 337 (397)
Q Consensus 267 ~~-------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~-tg~~p~~~~~~~ 337 (397)
.+ .++++|||++...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.|+......
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred cCcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 43 3799999987643221 22356788999998865 56899999999999999995 689987643221
Q ss_pred cccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 338 SSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. ...........+.. ....+.+++.+||+.+|++|||+.+|++.|.
T Consensus 229 ~---------~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 E---------KERFYEKKHRLPEP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H---------HHHHHHhccCCCCC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 01111111111111 1134889999999999999999999999874
No 217
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.5e-41 Score=304.23 Aligned_cols=262 Identities=23% Similarity=0.374 Sum_probs=200.5
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||+|... +|+.||+|++...... ....+.+.+|++++++++|||++++++++..+...++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD--PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC--ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEE
Confidence 36788889999999999999765 6899999988642211 12245688999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|..+.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 79 FEYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred EeccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9999999888876543 2489999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc---------c-------ccc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL---------N-------TDI 346 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~---------~-------~~~ 346 (397)
.........++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... . ...
T Consensus 153 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 153 PGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred CcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence 4333334567889999998875 4578999999999999999999999864332110000 0 000
Q ss_pred ccccccCCCCCCCC---cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEMLDPRLPAPS---RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+...... .........+.+++.+||+.+|++|||+.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000001000000 0011223568899999999999999999999864
No 218
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.4e-41 Score=307.43 Aligned_cols=255 Identities=24% Similarity=0.417 Sum_probs=199.0
Q ss_pred hcCCCCCccccccCcEEEEEEEeC--------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFC 194 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 194 (397)
.++|.+.+.||+|+||.||++... ....+|+|.++.... ......+..|+++++++ +||||+++++++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT---DKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC---hHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 457788899999999999999642 245789998764322 22356788999999999 699999999999
Q ss_pred ecCCeeeEEEEeccCCCHHHhhccccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCc
Q 016009 195 SHARHSFLVYEFLKRGSLAAILSSDAA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKN 261 (397)
Q Consensus 195 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 261 (397)
...+..+++|||+++|+|.+++..... ...+++.++..++.|++.||.|||+. +++|+||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 998999999999999999999965321 23589999999999999999999998 99999999999
Q ss_pred EEeCCCCcEEEeeeccccccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccc
Q 016009 262 LLLDLEFEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSIS 338 (397)
Q Consensus 262 ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~ 338 (397)
|++++++.+||+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999999865432211 111234467999999988889999999999999999999 888875432110
Q ss_pred ccccccccccccccCCC-CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 339 SSFLNTDIELDEMLDPR-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 339 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+.... ...+. .....+.+++.+||+.+|++|||+.++++.|+
T Consensus 245 --------~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 245 --------LFKLLREGHRMDKPS----NCTHELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred --------HHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 000011111 11111 22345889999999999999999999999875
No 219
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.5e-41 Score=304.27 Aligned_cols=255 Identities=23% Similarity=0.362 Sum_probs=200.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||++... ++..||+|.+..... ......+.+|++++++++||||+++++++...+..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD---ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC---HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence 36778899999999999999765 789999998864221 22346789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|..++........+++..+..++.+++.||.|||+.+ +++|+||||+||+++.++.++|+|||++.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence 999999999998876433346899999999999999999999642 899999999999999999999999999876532
Q ss_pred CCCCcccccccccccCcccccCCC------CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMK------ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~------~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
.. .....++..|+|||.+.+.. ++.++|+|||||++|||++|+.||....... . ......+.+...+
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~---~~~~~~~~~~~~~ 228 (286)
T cd06622 156 SL--AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--I---FAQLSAIVDGDPP 228 (286)
T ss_pred Cc--cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--H---HHHHHHHhhcCCC
Confidence 22 22346788999999886543 4789999999999999999999986322100 0 0011111121111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+....+.+++.+||+.+|++||++++++..
T Consensus 229 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 229 ---TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred ---CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1112345568899999999999999999999864
No 220
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.8e-41 Score=299.02 Aligned_cols=252 Identities=24% Similarity=0.464 Sum_probs=201.2
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.++|...+.||+|+||.||++...++..+++|.+... ....+.+.+|++++++++|+|++++.+++.. ...+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 3568888999999999999998877888999987642 1235678999999999999999999999887 778999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++..... ..+++.+++.++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EEeCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 999999999999976432 4588999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 284 DSSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 284 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
.... .....++..|+|||++....++.++|+||||+++|+++| |+.||.......... .... +...+.+
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~-----~~~~--~~~~~~~-- 225 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----ALER--GYRMPRP-- 225 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHhC--CCCCCCc--
Confidence 2211 122345677999999988889999999999999999999 899986432210000 0000 0011111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+|++.+|++||++.++.+.|+
T Consensus 226 --~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 226 --ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred --ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 123346889999999999999999999999986
No 221
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.7e-41 Score=303.10 Aligned_cols=260 Identities=24% Similarity=0.388 Sum_probs=203.5
Q ss_pred cHHHHHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEE
Q 016009 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGF 193 (397)
Q Consensus 116 ~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 193 (397)
++.++..+.+.|+..+.||+|+||.||+|.. .+++.+|+|.+... .....++..|+.+++++ +|+|+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-----hHHHHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 4455566778899999999999999999965 46889999987532 12345688899999999 69999999999
Q ss_pred Eec------CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC
Q 016009 194 CSH------ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE 267 (397)
Q Consensus 194 ~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 267 (397)
+.. ....+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++++
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 843 4578999999999999999865432 4588889999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc
Q 016009 268 FEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342 (397)
Q Consensus 268 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~ 342 (397)
+.++|+|||++..............++..|+|||.+. ...++.++||||||+++|||++|+.||.........
T Consensus 158 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-- 235 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-- 235 (282)
T ss_pred CCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh--
Confidence 9999999999876543333334456889999999875 345788999999999999999999998643321111
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+...... ..........+.+++.+||+.||.+|||+.|+++.
T Consensus 236 ------~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 236 ------FLIPRNPPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ------hhHhhCCCC--CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 011111111 11112334568999999999999999999999863
No 222
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=6e-41 Score=313.30 Aligned_cols=261 Identities=23% Similarity=0.316 Sum_probs=196.4
Q ss_pred HHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC---
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--- 197 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--- 197 (397)
...++|...+.||+|+||.||++.. ..++.||+|++...... ......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN--QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC--hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc
Confidence 3456899999999999999999965 46889999998753322 22356778999999999999999999988543
Q ss_pred ---CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEee
Q 016009 198 ---RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVAD 274 (397)
Q Consensus 198 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 274 (397)
...++||||+++ +|.+.+. ..+++.++..++.|+++||+|||+. +++||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEee
Confidence 356999999975 5666653 2478899999999999999999998 999999999999999999999999
Q ss_pred eccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-------------c
Q 016009 275 FGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-------------F 341 (397)
Q Consensus 275 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-------------~ 341 (397)
||+++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 163 fg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 163 FGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred CcccccCCCcc-ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99998654322 223457899999999999989999999999999999999999998643211000 0
Q ss_pred -ccccccccccc----------------CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 342 -LNTDIELDEML----------------DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 342 -~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
........... +...+............+.+++.+|++.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000 000000000111123467899999999999999999999975
No 223
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-41 Score=304.49 Aligned_cols=259 Identities=27% Similarity=0.382 Sum_probs=202.2
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||+||++.. ++|+.||+|++..... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK---SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc---chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 4677788999999999999965 4688999998764221 22357889999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++... +.+++..+..++.+++.||.|||+.. +++|+||+|+||++++++.++|+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 82 MEFMDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred EecCCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 9999999999988653 35899999999999999999999742 899999999999999999999999999865432
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc---cccccccccccCCCCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF---LNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 360 (397)
.. .....++..|+|||++.+..++.++|||||||++|+++||+.||.......... .........+.....+...
T Consensus 157 ~~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd06620 157 SI--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP 234 (284)
T ss_pred hc--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC
Confidence 21 123468899999999988889999999999999999999999987433210000 0000011111111111100
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
..+....+.+++.+|++.||++|||+.|++++.
T Consensus 235 --~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 235 --SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 112445688999999999999999999999863
No 224
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-40 Score=299.04 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=186.3
Q ss_pred cccccCcEEEEEEEeCCC---CEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 132 CIGNGGHGSVYRAELPSG---QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
.||+|+||.||+|...++ ..+++|.+..... ....+.+.+|+.+++.++||||+++++++......++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS---SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC---hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 599999999999965433 3456676553221 2235789999999999999999999999999999999999999
Q ss_pred CCCHHHhhccccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC--
Q 016009 209 RGSLAAILSSDAA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS-- 285 (397)
Q Consensus 209 ~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~-- 285 (397)
+|+|.+++..... ....++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 9999999976432 23467778889999999999999998 99999999999999999999999999876432211
Q ss_pred CCcccccccccccCcccccC-------CCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCC
Q 016009 286 SNWTEFAGTYGYVAPELAYT-------MKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
.......++..|+|||+... ..++.++||||||+++|||++ |..||.....................++.+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 11223467889999998753 245789999999999999997 5667753322100000000011112222222
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. .....+.+++..|| .+|++||++++|++.|.
T Consensus 236 ~------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 236 L------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred C------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1 12345778888999 57999999999999873
No 225
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.6e-41 Score=305.22 Aligned_cols=261 Identities=19% Similarity=0.258 Sum_probs=197.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||+|... +++.||+|.+...... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc---CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 46888899999999999999654 6889999998643221 1245677899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 83 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 83 FEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred Eeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 99997 58988886543 3588999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-----c--ccccccccccc---
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-----F--LNTDIELDEML--- 352 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-----~--~~~~~~~~~~~--- 352 (397)
.........+++.|+|||.+.+. .++.++||||||+++|||+||+.||......... . .........+.
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 157 PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred CCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence 33333345678899999987653 5788999999999999999999998643221000 0 00000000000
Q ss_pred ---CCCCCCC-Cc----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 ---DPRLPAP-SR----SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 ---~~~~~~~-~~----~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+.. .. ........+.+++.+|++.||.+|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000 00 001123457899999999999999999999864
No 226
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.6e-41 Score=321.91 Aligned_cols=258 Identities=24% Similarity=0.293 Sum_probs=188.8
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC-----
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA----- 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 197 (397)
..+|...+.||+|+||.||+|.. .+++.||||++... .....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~--------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD--------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC--------cchHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 45788999999999999999965 46889999987531 12345799999999999999999886432
Q ss_pred ---CeeeEEEEeccCCCHHHhhccc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC-cEEE
Q 016009 198 ---RHSFLVYEFLKRGSLAAILSSD-AAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF-EAHV 272 (397)
Q Consensus 198 ---~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl 272 (397)
...++||||+++ +|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceee
Confidence 246789999985 676665432 1234689999999999999999999998 999999999999998665 7999
Q ss_pred eeeccccccCCCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------ccc
Q 016009 273 ADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------LNT 344 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------~~~ 344 (397)
+|||+++.+..... .....+|+.|+|||++.+. .++.++|||||||++|||++|.+||.......... ...
T Consensus 213 ~DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 213 CDFGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT 291 (440)
T ss_pred eccccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 99999986653322 2335679999999987654 68999999999999999999999986432211000 000
Q ss_pred cccccc----ccCCCCCCC-Ccch-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 345 DIELDE----MLDPRLPAP-SRSV-----QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 345 ~~~~~~----~~~~~~~~~-~~~~-----~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...... ..+..++.. .... ...+.++.+|+.+||+.||.+|||+.|++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000000 000000000 0000 0123468899999999999999999999864
No 227
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-40 Score=298.98 Aligned_cols=247 Identities=27% Similarity=0.433 Sum_probs=191.0
Q ss_pred ccccccCcEEEEEEEeC-CCC--EEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEe
Q 016009 131 YCIGNGGHGSVYRAELP-SGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
+.||+|+||.||+|... ++. .+++|.+..... ....+.+.+|+++++++ +||||+++++++...+..+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC---HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEe
Confidence 35899999999999765 343 468888763211 12346788999999999 899999999999999999999999
Q ss_pred ccCCCHHHhhccccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEe
Q 016009 207 LKRGSLAAILSSDAA-------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVA 273 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 273 (397)
+++|+|.+++..... ...+++.++..++.|++.|++|||+. +++|+||||+||++++++.+||+
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEEC
Confidence 999999999865321 13478999999999999999999998 99999999999999999999999
Q ss_pred eeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc
Q 016009 274 DFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEML 352 (397)
Q Consensus 274 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
|||++....... .......+..|+|||+.....++.++||||||+++|||++ |..||....... ....+.
T Consensus 155 dfgl~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--------~~~~~~ 225 (270)
T cd05047 155 DFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------LYEKLP 225 (270)
T ss_pred CCCCccccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--------HHHHHh
Confidence 999985322111 1111233567999999988889999999999999999997 999985432110 000010
Q ss_pred C-CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 353 D-PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 353 ~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. .....+. .....+.+++.+||+.+|.+|||+.++++.|+
T Consensus 226 ~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 226 QGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred CCCCCCCCC----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 0 0111111 22345889999999999999999999999885
No 228
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-40 Score=302.71 Aligned_cols=261 Identities=26% Similarity=0.361 Sum_probs=192.4
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc---cCCceeeeEEEEec-----
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI---RHRNIVKLYGFCSH----- 196 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~----- 196 (397)
+|+..+.||+|+||.||+|... +++.||+|.+....... .....+.+|+++++.+ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 4677889999999999999654 78999999987532221 1223456777777665 69999999998854
Q ss_pred CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeec
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFG 276 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 276 (397)
....+++|||+++ +|.+++..... ..+++.++..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||
T Consensus 79 ~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 79 ETKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred CceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence 3457999999975 88888865432 4589999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc--cc-----ccccccc-
Q 016009 277 IAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--SF-----LNTDIEL- 348 (397)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--~~-----~~~~~~~- 348 (397)
++....... ......++..|+|||++.+..++.++||||+||++|||++|+.||........ .. .......
T Consensus 154 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 154 LARIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred ccccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 998654322 22335678999999999988899999999999999999999999853321100 00 0000000
Q ss_pred ------ccccCCCCCCC-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 ------DEMLDPRLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 ------~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+....+ .....+....+.+++.+|++.||++|||+.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000 00111233457899999999999999999999864
No 229
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.2e-41 Score=337.74 Aligned_cols=258 Identities=23% Similarity=0.355 Sum_probs=198.4
Q ss_pred HHHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec--C
Q 016009 121 VRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--A 197 (397)
Q Consensus 121 ~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~ 197 (397)
....++|.+.+.||+|+||+||++... ++..+|+|.+..... .......+..|+.++++++||||+++++++.. .
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l--~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL--KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 344568999999999999999999654 677899998864322 22235678999999999999999999998854 4
Q ss_pred CeeeEEEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCceeccCCCCcEEeCCC-----
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCF----PPIVHRDISSKNLLLDLE----- 267 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~----~~ivH~dlk~~Nill~~~----- 267 (397)
...++||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+... .+|+|+||||+|||++.+
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 56899999999999999986532 12469999999999999999999998521 259999999999999642
Q ss_pred ------------CcEEEeeeccccccCCCCCCcccccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 016009 268 ------------FEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLALEVIKGKHPRDF 333 (397)
Q Consensus 268 ------------~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~ 333 (397)
+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||+||||+||+.||..
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 348999999998654322 2234578999999998864 4588999999999999999999999864
Q ss_pred ccccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 334 LSSISSSFLNTDIELDEML-DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
...... .+..+. .+.++. ......+.+||..||+.+|++||++.|++.
T Consensus 246 ~~~~~q-------li~~lk~~p~lpi-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANNFSQ-------LISELKRGPDLPI-----KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcHHH-------HHHHHhcCCCCCc-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 322110 001110 111111 112345889999999999999999999985
No 230
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.9e-41 Score=303.69 Aligned_cols=262 Identities=26% Similarity=0.412 Sum_probs=203.0
Q ss_pred cHHHHHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEE
Q 016009 116 VYDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGF 193 (397)
Q Consensus 116 ~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 193 (397)
...++..++++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.+++++ +|||+++++++
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 3455566788999999999999999999965 478899999986421 1245678899999999 89999999999
Q ss_pred EecC-----CeeeEEEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC
Q 016009 194 CSHA-----RHSFLVYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE 267 (397)
Q Consensus 194 ~~~~-----~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 267 (397)
+... +..++||||+++++|.+++.... ....+++..++.++.|++.||.|||+. +++|+||||+||+++++
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 8653 35899999999999999886422 224689999999999999999999998 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCcccccccccccCcccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc
Q 016009 268 FEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342 (397)
Q Consensus 268 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~ 342 (397)
+.++|+|||++..............++..|+|||.+... .++.++||||||+++|||++|+.||..........
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~- 243 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF- 243 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH-
Confidence 999999999988655433333345688899999987643 36889999999999999999999986433211000
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+.+..+ ......+.+++.+||+.+|++||++.|++++
T Consensus 244 ----~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 ----KIPRNPPPTLLHP----EKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ----HHhcCCCCCCCcc----cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0000001111111 1233468899999999999999999999864
No 231
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.1e-40 Score=294.62 Aligned_cols=246 Identities=30% Similarity=0.474 Sum_probs=197.4
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCC
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRG 210 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 210 (397)
+.||+|+||.||++...+++.|++|.+...... .....+.+|++++++++|+||+++++++......++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP---DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH---HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 358999999999998767999999988653322 23567899999999999999999999999999999999999999
Q ss_pred CHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc--
Q 016009 211 SLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW-- 288 (397)
Q Consensus 211 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-- 288 (397)
+|.+++.... ..+++..++.++.+++.|++|||++ +++|+||+|+||+++.++.++|+|||++..........
T Consensus 78 ~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 78 SLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 9999986543 3578999999999999999999998 99999999999999999999999999987654221111
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC--CCCCCCcchHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP--RLPAPSRSVQE 365 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 365 (397)
.....+..|+|||.+.++.++.++|+||||+++|||+| |..||....... ....+.. ....+ ..
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---------~~~~~~~~~~~~~~----~~ 219 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---------TRERIESGYRMPAP----QL 219 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---------HHHHHhcCCCCCCC----cc
Confidence 11233567999999988889999999999999999999 888875432110 0111111 11111 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 016009 366 KLRSIVEVVFSCLNESPESRPTMKIVSQQLQI 397 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le~ 397 (397)
.+..+.+++.+|++.+|++|||+.|+++.|+.
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 34468899999999999999999999999863
No 232
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.8e-40 Score=298.16 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=201.2
Q ss_pred CCCCCccccccCcEEEEEEEeCC--CCEEEEEecCCCCCC------cchhcHHHHHHHHHHHHh-ccCCceeeeEEEEec
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPS--GQVVAIKKFHSPLPS------DQIVDKKEFLTEVEALTE-IRHRNIVKLYGFCSH 196 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~--~~~vavK~~~~~~~~------~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 196 (397)
+|+..+.||+|+||.||+|.... ++.+|+|.+...... .......++..|+.++.+ ++|||++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778889999999999997654 688999987542211 112234567788988875 699999999999999
Q ss_pred CCeeeEEEEeccCCCHHHhhccc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 197 ARHSFLVYEFLKRGSLAAILSSD-AAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 197 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
++..+++|||+++++|.+++... .....+++..++.++.|++.||.|||+. .+++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999987542 1224589999999999999999999963 18999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPR 355 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
|.+....... ......++..|+|||...+..++.++||||||+++|||++|+.||....... ....+.+..
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~--------~~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS--------LATKIVEAV 229 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH--------HHHHHhhcc
Confidence 9998655433 3344568889999999998889999999999999999999999976432211 011111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...... ......+.+++.+||+.||++||++.|+.++++
T Consensus 230 ~~~~~~--~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPLPE--GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcCCc--ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111000 112345889999999999999999999999885
No 233
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.3e-40 Score=304.71 Aligned_cols=194 Identities=22% Similarity=0.366 Sum_probs=158.8
Q ss_pred CccccccCcEEEEEEEeC---CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec--CCeeeEEE
Q 016009 130 QYCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--ARHSFLVY 204 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 204 (397)
.+.||+|+||.||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....+++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC------CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 357999999999999754 56789999986421 12457789999999999999999998854 45689999
Q ss_pred EeccCCCHHHhhcccc------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEe----CCCCcEEEee
Q 016009 205 EFLKRGSLAAILSSDA------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLL----DLEFEAHVAD 274 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~D 274 (397)
||+. ++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 9986 48877765322 123588999999999999999999998 99999999999999 4567899999
Q ss_pred eccccccCCCCC---CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCc
Q 016009 275 FGIAKFLKPDSS---NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDF 333 (397)
Q Consensus 275 fg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~ 333 (397)
||++........ ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 999987643321 22345789999999998764 589999999999999999999999863
No 234
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-40 Score=300.42 Aligned_cols=259 Identities=25% Similarity=0.337 Sum_probs=199.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec--CCeee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--ARHSF 201 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 201 (397)
++|+..+.||.|++|.||++... +++.+|+|.+..... ......+.+|++++++++||||+++++++.. .+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence 36777889999999999999764 688999998864322 1235778999999999999999999999854 34689
Q ss_pred EEEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 202 LVYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccc
Confidence 9999999999998875322 224588999999999999999999998 999999999999999999999999999875
Q ss_pred cCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccC---CCCC
Q 016009 281 LKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD---PRLP 357 (397)
Q Consensus 281 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 357 (397)
...... ....++..|+|||...+..++.++||||+|+++|+|++|+.||+......... ......+.+ +.+.
T Consensus 155 ~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 229 (287)
T cd06621 155 LVNSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGP---IELLSYIVNMPNPELK 229 (287)
T ss_pred cccccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCCh---HHHHHHHhcCCchhhc
Confidence 432221 23457889999999998899999999999999999999999987542200000 000111111 1111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
............+.+++.+||+.+|++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 230 DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1111111234568999999999999999999999874
No 235
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.3e-42 Score=297.05 Aligned_cols=256 Identities=27% Similarity=0.351 Sum_probs=190.8
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC-----e
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR-----H 199 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~ 199 (397)
.|...+++|+|+||.||+|... +++.||||+...+.... -.|+++|+.++|||||+++-+|.... .
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k--------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK--------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC--------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 4666789999999999999654 57899999986533322 27999999999999999999885432 3
Q ss_pred eeEEEEeccCCCHHHhhccc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-CcEEEeeecc
Q 016009 200 SFLVYEFLKRGSLAAILSSD-AAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGI 277 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 277 (397)
..+|||||+. +|.+.++.. ...+.++...+.-++.|+.+||+|||+. +|+||||||.|+|+|.+ |.+||+|||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 4589999987 888887642 1124577778888999999999999998 99999999999999987 8999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccc-------cccccccccc
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISS-------SFLNTDIELD 349 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~-------~~~~~~~~~~ 349 (397)
|+.+..+....+ ..-|-.|.|||.+.+. .|+.+.||||.||++.||+.|++-|...+.... -.....+++.
T Consensus 173 AK~L~~~epniS-YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 173 AKVLVKGEPNIS-YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred ceeeccCCCcee-EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 999877655533 3446789999988864 699999999999999999999988764333210 0000000111
Q ss_pred -------cccCCCCCCCC--c-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 350 -------EMLDPRLPAPS--R-SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 350 -------~~~~~~~~~~~--~-~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+...+.+.... . .......+..+|+.++++.+|++|.++.|++.+
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111111110 0 112233568899999999999999999998864
No 236
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9e-41 Score=318.18 Aligned_cols=191 Identities=25% Similarity=0.338 Sum_probs=164.9
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
..|.+.+.||+|+||.||++... +++.||||... ...+.+|++++++++|+||+++++++..++..++|
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 36888899999999999999765 57889999632 23457899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||++. ++|.+++.... ..++|.+++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 239 ~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 99995 68888876433 3699999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCC
Q 016009 284 DSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPR 331 (397)
Q Consensus 284 ~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~ 331 (397)
.... .....||..|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 2221 22356899999999999999999999999999999999987653
No 237
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.6e-41 Score=305.43 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=197.6
Q ss_pred CCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 128 DAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
.....||+|+||.||++.. .++..||+|.+... .....+.+.+|+.+++.++|+|++++++.+..++..++||||
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 3345699999999999965 46889999997542 123356788999999999999999999999999999999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
+++++|.+++.. ..+++.++..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 101 LEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 999999998853 2488999999999999999999998 999999999999999999999999999876544333
Q ss_pred CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHH
Q 016009 287 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366 (397)
Q Consensus 287 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
......++..|+|||...+..++.++||||||+++|||++|+.||.......... .......+..... ...
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~ 244 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR-----RIRDNLPPRVKDS----HKV 244 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhcCCCccccc----ccc
Confidence 3344568899999999988889999999999999999999999986432211000 0111111111111 122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 367 LRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 367 ~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+.+++..||+.||++|||+++++++
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 3457788999999999999999999875
No 238
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.2e-40 Score=296.63 Aligned_cols=256 Identities=25% Similarity=0.380 Sum_probs=201.7
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec--CCeeeE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--ARHSFL 202 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 202 (397)
+|+..+.||.|+||.||++.. .+++.+++|.+..... .....+.+..|++++++++|||++++++++.. +...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM--TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence 467788899999999999954 5788999999864322 22345678899999999999999999998753 456799
Q ss_pred EEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 203 VYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDC--FPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
+|||+++++|.+++.... ....+++..++.++.+++.||.|||..+ ..+++|+||+|+||++++++.+||+|||++.
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence 999999999999986532 2246899999999999999999999321 2299999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 280 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 280 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
.............++..|+|||.+.+..++.++|+||||+++++|++|+.||....... ....+.....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~- 229 (265)
T cd08217 159 ILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ--------LASKIKEGKFRR- 229 (265)
T ss_pred cccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH--------HHHHHhcCCCCC-
Confidence 76654432344578999999999998889999999999999999999999987432110 011111111111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
........+.+++.+|++.+|++|||+++|+++
T Consensus 230 --~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 230 --IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 112334568899999999999999999999874
No 239
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.8e-41 Score=313.59 Aligned_cols=243 Identities=24% Similarity=0.280 Sum_probs=187.1
Q ss_pred ccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc---cCCceeeeEEEEecCCeeeEEEEecc
Q 016009 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI---RHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 133 lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
||+|+||+||+|... +++.||+|++...... .......+..|..++... +||||+++++++...+..++||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-AKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-hhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence 699999999999654 6899999998531111 111233455677777665 69999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++..........
T Consensus 80 ~g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~ 153 (330)
T cd05586 80 GGELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT 153 (330)
T ss_pred CChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence 99999988654 3589999999999999999999998 99999999999999999999999999987644333333
Q ss_pred ccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHH
Q 016009 289 TEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKL 367 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (397)
....||..|+|||.+.+. .++.++|||||||++|||+||+.||....... ....+.......+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~~---~~~ 222 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ--------MYRNIAFGKVRFPKN---VLS 222 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH--------HHHHHHcCCCCCCCc---cCC
Confidence 456799999999998754 47899999999999999999999986422110 011111111111111 123
Q ss_pred HHHHHHHHHccCCCCCCCC----CHHHHHH
Q 016009 368 RSIVEVVFSCLNESPESRP----TMKIVSQ 393 (397)
Q Consensus 368 ~~l~~l~~~cl~~~P~~RP----t~~~vl~ 393 (397)
..+.+++.+||+.||++|| ++.++++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 4577899999999999998 5666665
No 240
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=293.07 Aligned_cols=259 Identities=27% Similarity=0.426 Sum_probs=199.0
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc--cCCceeeeEEEEecC----
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI--RHRNIVKLYGFCSHA---- 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~---- 197 (397)
..+....+.||+|.||.||+|.+ .|+.||||++.. .+.+...+|.++.+.+ +|+||+.+++.-..+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s-------rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS-------RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEecc-------cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 34566778899999999999999 578899999874 1246788899998875 999999999876443
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCceeccCCCCcEEeCCCCcEEE
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHD-----CFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
.++|||.+|.+.|||.|+|..+ .++-...++++..+|.||++||.. ..|.|.|||||+.|||+..++...|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 3679999999999999999763 488999999999999999999975 3478999999999999999999999
Q ss_pred eeeccccccCCCCC----CcccccccccccCcccccCCC----C--CcchhhHHHHHHHHHHHhC----------CCCCC
Q 016009 273 ADFGIAKFLKPDSS----NWTEFAGTYGYVAPELAYTMK----I--TEKCDVYSFGVLALEVIKG----------KHPRD 332 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~----~--~~~~Dv~s~G~~l~el~tg----------~~p~~ 332 (397)
+|+|+|-....... .....+||.+|||||++...- + -..+||||||.++||++-. +.||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 99999976654422 235578999999999987532 1 2368999999999999752 35554
Q ss_pred cccccccccccc-ccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 333 FLSSISSSFLNT-DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 333 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
+..+....+... .....+-+.|.++..+.. .+.+..+.+++..||..+|..|-|+-.+-+.|
T Consensus 438 d~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s-~~~l~~m~klMkeCW~~Np~aRltALriKKtl 500 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVVCVQKLRPNIPNRWKS-DPALRVMAKLMKECWYANPAARLTALRIKKTL 500 (513)
T ss_pred cCCCCCCCHHHHhcceeecccCCCCCccccc-CHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence 443332222211 111122233444433333 46788899999999999999999987776654
No 241
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.9e-41 Score=305.06 Aligned_cols=246 Identities=26% Similarity=0.415 Sum_probs=196.6
Q ss_pred CCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEec
Q 016009 129 AQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
....||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.+++.++|||++++++++..++..++|+||+
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc----cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 345699999999999965 478999999985421 123467889999999999999999999999999999999999
Q ss_pred cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC
Q 016009 208 KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287 (397)
Q Consensus 208 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 287 (397)
++++|.+++.. ..+++.+++.++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 101 ~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 101 QGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred CCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccccc
Confidence 99999998754 3489999999999999999999998 9999999999999999999999999998765443333
Q ss_pred cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHH
Q 016009 288 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKL 367 (397)
Q Consensus 288 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (397)
.....++..|+|||++.+..++.++||||||+++|||++|+.||........... +.....+... ......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~ 244 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-----LRDSPPPKLK----NAHKIS 244 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HhccCCCCcc----ccCCCC
Confidence 3445788999999999988899999999999999999999999864322110000 0000000111 111223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 368 RSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 368 ~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+.+++.+||+.+|++||++++++++
T Consensus 245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 245 PVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 457889999999999999999999874
No 242
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.5e-41 Score=309.77 Aligned_cols=255 Identities=23% Similarity=0.309 Sum_probs=194.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|++.+.||+|+||.||++... +++.||+|++.... .......+.+.+|..++..++|+||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-MLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 46888899999999999999754 68999999986311 11112345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred EecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999996532 3588999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCC-cccccccccccCcccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccC--CC
Q 016009 284 DSSN-WTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PR 355 (397)
Q Consensus 284 ~~~~-~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 355 (397)
.... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ...+.. ..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~--------~~~i~~~~~~ 226 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGKIMNHKEH 226 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH--------HHHHHcCCCc
Confidence 3222 223468999999999863 4578899999999999999999999864322110 000100 00
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCC--CCCCCCHHHHHHH
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNES--PESRPTMKIVSQQ 394 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~--P~~RPt~~~vl~~ 394 (397)
...+.. .......+.+++.+|+..+ +..||++++++++
T Consensus 227 ~~~~~~-~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 227 FQFPPD-VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ccCCCc-cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 110110 0112345677777766543 3347899998865
No 243
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.9e-40 Score=300.44 Aligned_cols=250 Identities=26% Similarity=0.413 Sum_probs=202.1
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||++.. .+++.|++|.+.... ....+.+.+|+.++++++|||++++++++...+..++|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc----chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 5788889999999999999964 478899999975321 22356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.+++... .+++.++..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 95 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred EecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999998643 478999999999999999999998 999999999999999999999999999876654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........+++.|+|||.+.+..++.++||||||+++|++++|+.||........... ....+... ....
T Consensus 168 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-------~~~~~~~~--~~~~ 238 (293)
T cd06647 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------IATNGTPE--LQNP 238 (293)
T ss_pred cccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-------hhcCCCCC--CCCc
Confidence 44333445688899999999888899999999999999999999999864332111000 00011100 1111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.+|++||++++++.+
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2233458899999999999999999999875
No 244
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.4e-40 Score=295.21 Aligned_cols=247 Identities=28% Similarity=0.430 Sum_probs=188.9
Q ss_pred ccccccCcEEEEEEEeC----CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe-cCCeeeEEEE
Q 016009 131 YCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS-HARHSFLVYE 205 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e 205 (397)
+.||+|+||.||+|... ++..+|+|.+.... .....+.+.+|+.+++.++|||++++++++. .++..++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEe
Confidence 35899999999999653 24579999875321 1223567889999999999999999999875 4556889999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+.+|+|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++.......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 78 YMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 999999999986543 3467888899999999999999998 99999999999999999999999999987543221
Q ss_pred ----CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhC-CCCCCccccccccccccccccccccCCCCCCCC
Q 016009 286 ----SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-KHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 286 ----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
.......++..|+|||...+..++.++||||||+++|||++| ..|+....... ....+.........
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 224 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD--------ITVYLLQGRRLLQP 224 (262)
T ss_pred ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHhcCCCCCCC
Confidence 111223456789999999888899999999999999999995 55554322110 00111111111101
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++..||+.+|++||++.+|++.|+
T Consensus 225 ---~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 225 ---EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred ---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 112345889999999999999999999999886
No 245
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.4e-40 Score=294.65 Aligned_cols=253 Identities=28% Similarity=0.437 Sum_probs=206.3
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||++... +++.|++|++...... ...+.+.+|++.+++++|+|++++++++...+..++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEE
Confidence 36788899999999999999765 5999999998753321 3367899999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|||+++++|.+++... ..+++..++.++.|+++|++|||+ . +++|+||+|+||+++.++.++|+|||++....
T Consensus 78 ~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~ 151 (264)
T cd06623 78 LEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLE 151 (264)
T ss_pred EEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 9999999999999754 358999999999999999999999 8 99999999999999999999999999998765
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
..........++..|+|||...+..++.++|+||||+++|+|+||+.|+....... . ......+.....+...
T Consensus 152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~---~~~~~~~~~~~~~~~~-- 224 (264)
T cd06623 152 NTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS--F---FELMQAICDGPPPSLP-- 224 (264)
T ss_pred cCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC--H---HHHHHHHhcCCCCCCC--
Confidence 44433334567889999999998889999999999999999999999986543200 0 0011111111111111
Q ss_pred hHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQE-KLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~-~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.. .+..+.+++.+||+.+|++|||+++++++
T Consensus 225 -~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 225 -AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11 34568899999999999999999999874
No 246
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9.9e-41 Score=299.16 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=203.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||++... +++.+++|.+...... ...+++.+|++++++++||||+++++++...+..+++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE---AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh---HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEE
Confidence 35777888999999999999765 6899999998753221 3356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++|+||+|+||++++++.++|+|||.+....
T Consensus 78 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 78 MEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred EEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 99999999999987643 468899999999999999999999 7 99999999999999999999999999987654
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.... ....++..|+|||...+..++.++||||||+++|+|++|+.|+........... .....+.....+...
T Consensus 153 ~~~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~-- 225 (265)
T cd06605 153 NSLA--KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF---ELLQYIVNEPPPRLP-- 225 (265)
T ss_pred HHHh--hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHH---HHHHHHhcCCCCCCC--
Confidence 3221 125688899999999988999999999999999999999999864421110000 011111111111101
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+.+++.+||..||++|||+.+++.+
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 226 SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11144568899999999999999999999864
No 247
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.1e-40 Score=303.72 Aligned_cols=255 Identities=24% Similarity=0.300 Sum_probs=202.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||++... +++.||+|.+..... ......+.+..|+++++.++|+||+++++.+......++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM-IKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecccc-chHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence 36778889999999999999765 589999999875322 1122456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+.+++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 80 MDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999999986543 24689999999999999999999998 999999999999999999999999999875432
Q ss_pred CCC-----------------------------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcc
Q 016009 284 DSS-----------------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFL 334 (397)
Q Consensus 284 ~~~-----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~ 334 (397)
... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 211 011235788999999999888999999999999999999999998643
Q ss_pred ccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC----HHHHHHH
Q 016009 335 SSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT----MKIVSQQ 394 (397)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt----~~~vl~~ 394 (397)
... .....+.+.....+.. ......+.+++.+||+.||++||| +++++..
T Consensus 236 ~~~--------~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 236 NRD--------ETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred chH--------HHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 321 1111222222211111 113456899999999999999999 8887763
No 248
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.2e-40 Score=294.77 Aligned_cols=238 Identities=26% Similarity=0.443 Sum_probs=188.0
Q ss_pred ccccccCcEEEEEEEeCCCC-----------EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 131 YCIGNGGHGSVYRAELPSGQ-----------VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
+.||+|+||.||+|...+.. .+++|.+.... . ....+.+|+.++++++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----R-DSLAFFETASLMSQLSHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----h-hHHHHHHHHHHHHcCCCcchhheeeEEec-CC
Confidence 35899999999999765432 47777765321 1 15788999999999999999999999988 77
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC-------cEEE
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF-------EAHV 272 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-------~~kl 272 (397)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++ .++|
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEe
Confidence 8999999999999999976542 589999999999999999999998 999999999999999888 7999
Q ss_pred eeeccccccCCCCCCcccccccccccCcccccCC--CCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccc
Q 016009 273 ADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELD 349 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 349 (397)
+|||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..|+.......... ...
T Consensus 150 ~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-----~~~ 220 (259)
T cd05037 150 SDPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-----FYQ 220 (259)
T ss_pred CCCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-----HHh
Confidence 99999886543 1223567789999998876 78999999999999999999 577765432110000 000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+. ...+.+++.+||+.+|++|||+.+|++.|+
T Consensus 221 --~~~~~~~~~------~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 --DQHRLPMPD------CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --cCCCCCCCC------chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 011111111 146889999999999999999999999874
No 249
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.3e-40 Score=310.29 Aligned_cols=260 Identities=23% Similarity=0.327 Sum_probs=195.6
Q ss_pred HhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC----
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA---- 197 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---- 197 (397)
..++|...+.||+|+||.||++.. ..++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN--QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC--chhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 356899999999999999999965 46889999998753322 22356788999999999999999999987543
Q ss_pred --CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 198 --RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 198 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
...++||||+++ +|.+.+. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeC
Confidence 357999999975 6766663 2478899999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-------------cc
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-------------FL 342 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-------------~~ 342 (397)
|++....... ......+|..|+|||++.+..++.++|||||||++|||++|+.||......... ..
T Consensus 171 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 171 GLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred CCccccCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9998654322 223457899999999999999999999999999999999999998643221000 00
Q ss_pred c-cccccccccC--------------CCC--CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 343 N-TDIELDEMLD--------------PRL--PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 343 ~-~~~~~~~~~~--------------~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. .......... +.. +............+.+++.+|++.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0000000000 000 00000001123467899999999999999999999875
No 250
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.1e-40 Score=296.56 Aligned_cols=249 Identities=28% Similarity=0.473 Sum_probs=200.0
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc---CCceeeeEEEEecCCeee
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR---HRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~ 201 (397)
.|+..+.||+|+||.||+|.. .+++.|++|.+..... .....++.+|++++++++ |||++++++++..+...+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence 466778899999999999975 5789999999864322 123467889999999996 999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+||||+++++|.+++... .+++..++.++.+++.||.|||+. +++|+||+|+||++++++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred EEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999999999998543 589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
...........|+..|+|||.+.++ .++.++|+||||+++|+|++|..||........... ......+.+..
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~-- 224 (277)
T cd06917 152 NQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMML-----IPKSKPPRLED-- 224 (277)
T ss_pred CCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhc-----cccCCCCCCCc--
Confidence 5544334445788999999988654 468899999999999999999999864332111000 00001111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.||++||++.+++++
T Consensus 225 ---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 225 ---NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 1134568899999999999999999999864
No 251
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.4e-40 Score=301.69 Aligned_cols=262 Identities=24% Similarity=0.400 Sum_probs=200.2
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||+|..+ +++.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK--MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc--hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence 36778899999999999999765 68999999986532221 2346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.++.... ..+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 79 FEFVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred EecCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999999998876543 2489999999999999999999998 999999999999999999999999999887654
Q ss_pred CCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccc---------ccccc-------cc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS---------SFLNT-------DI 346 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~---------~~~~~-------~~ 346 (397)
.........++..|+|||+..+ ..++.++||||||+++|||++|+.||........ ..... ..
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 153 PGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred CccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence 4333344567889999998875 4478899999999999999999998853221100 00000 00
Q ss_pred ccccccCCCCCCCC---cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEMLDPRLPAPS---RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+..+...... .........+.+++.+||+.+|++||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000001100000 0011224568899999999999999999999864
No 252
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-42 Score=317.34 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=206.9
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCC-EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+.|.++..||.|+||.||++..++.. ..|.|++.. ......++|+-|++||..++||+||++++.|...+.+|++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet----kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET----KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc----cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence 35667788999999999999766544 445566543 2234578899999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
.|||.||-.+..+-.-+ ..|++.++..+++|++.||.|||++ .|||||||+.|||++-+|.++|+|||.+.....
T Consensus 108 iEFC~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred EeecCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh
Confidence 99999999988875433 5699999999999999999999999 999999999999999999999999999876555
Q ss_pred CCCCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
.......+.||++|||||+.. ..+|+.++||||||++|.||..+.+|.....++..-.-.. .--.|.+.
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia-----KSePPTLl- 256 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-----KSEPPTLL- 256 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh-----hcCCCccc-
Confidence 545556789999999999865 4578999999999999999999999988766654221111 00112222
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 359 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+..+...+.+++..||.+||..||++.+++++
T Consensus 257 ---qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 257 ---QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred ---CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 234667789999999999999999999999875
No 253
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.9e-40 Score=299.16 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=201.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC-----CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec--C
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--A 197 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~ 197 (397)
++|...+.||+|+||.||++... ++..+|+|.+...... ...+.+.+|+++++.++|+||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 35667788999999999999753 4678999998753322 235789999999999999999999999877 5
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...+++|||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccc
Confidence 67899999999999999997644 2589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCc---ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc---c---cccccc
Q 016009 278 AKFLKPDSSNW---TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF---L---NTDIEL 348 (397)
Q Consensus 278 ~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~---~---~~~~~~ 348 (397)
+.......... ....++..|+|||...+..++.++||||||++++||+||+.|+.......... . ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 156 AKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 98765332211 11234567999999988889999999999999999999999975332111000 0 000001
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+.+......+. ......++.+++.+||+.+|++|||+.||+++|+
T Consensus 236 ~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 236 LELLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281 (284)
T ss_pred HHHHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence 111111111000 1122356889999999999999999999999986
No 254
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=319.33 Aligned_cols=247 Identities=28% Similarity=0.502 Sum_probs=204.0
Q ss_pred CCCCccccccCcEEEEEEE-eCCCC----EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 127 FDAQYCIGNGGHGSVYRAE-LPSGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~-~~~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
....++||+|+||+||+|. .+.|+ +||+|++...... ...+++++|+-+|.+++|||+++++|+|.... ..
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~---~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP---KASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc---hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 3446789999999999994 44543 7899998753322 23578999999999999999999999998766 88
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
||++||+.|+|.++++.++ ..+..+..+.|..|||+||.|||.+ +++||||.++|||+.+-..+||.|||+++.+
T Consensus 774 lvtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll 848 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLL 848 (1177)
T ss_pred HHHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence 9999999999999998866 3688899999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCCcccccc--cccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc--CCCC
Q 016009 282 KPDSSNWTEFAG--TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEML--DPRL 356 (397)
Q Consensus 282 ~~~~~~~~~~~g--~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~ 356 (397)
..+........| .+.|||-|.+....++.++|||||||.+||++| |..|++..... ++.+.+ ..++
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~---------eI~dlle~geRL 919 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE---------EIPDLLEKGERL 919 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH---------HhhHHHhccccC
Confidence 876655444333 568999999999999999999999999999998 99998754421 111111 1234
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
+.|+ .+..+++.++.+||..|+..||+++++...+
T Consensus 920 sqPp----iCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 920 SQPP----ICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred CCCC----CccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 4444 3445689999999999999999999988764
No 255
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-40 Score=299.04 Aligned_cols=256 Identities=27% Similarity=0.425 Sum_probs=201.6
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCC-
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHAR- 198 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~- 198 (397)
.++++|+..+.||+|++|.||+|... +++.+++|.+.... ...+++.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP 77 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCC
Confidence 35688999999999999999999764 67899999976421 1346789999999999 7999999999996544
Q ss_pred -----eeeEEEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEE
Q 016009 199 -----HSFLVYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 199 -----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|
T Consensus 78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l 154 (275)
T cd06608 78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKL 154 (275)
T ss_pred CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEE
Confidence 4899999999999999986532 124689999999999999999999998 9999999999999999999999
Q ss_pred eeeccccccCCCCCCcccccccccccCcccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccc
Q 016009 273 ADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 347 (397)
+|||++..............++..|+|||.+.. ..++.++||||||+++|+|++|+.||........
T Consensus 155 ~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------- 226 (275)
T cd06608 155 VDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-------- 226 (275)
T ss_pred CCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--------
Confidence 999998765443333344568899999998753 3467899999999999999999999864322110
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 348 LDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+.... .............+.+++.+||+.||++|||+.+++++
T Consensus 227 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 227 LFKIPRNP-PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HHHhhccC-CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 01111100 10111112345678899999999999999999999864
No 256
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5.4e-40 Score=294.60 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=195.5
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCC-cchhcHHHHHHHHHHHHhccCCceeeeEEEEec--CCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPS-DQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--ARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 200 (397)
.+|...+.||+|+||.||++.. .++..|++|++...... ........+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688889999999999999965 46899999988643221 112234568899999999999999999998865 3577
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++++||+++++|.+++.... .+++...+.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999986543 488999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCC---CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 281 LKPDS---SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 281 ~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||........... .......+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~ 231 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK----IATQPTNPQLP 231 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH----HhcCCCCCCCc
Confidence 53211 112234578899999999988899999999999999999999999864322110000 00000111111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++ .||..+|++||+++||+++
T Consensus 232 ------~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 232 ------SHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred ------hhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 12233455666 6888999999999999863
No 257
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.5e-40 Score=296.59 Aligned_cols=256 Identities=23% Similarity=0.393 Sum_probs=200.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
++|+....||+|+||.||+|..+ +.+.+++|.+.... .....+.+.+|++++++++|+|++++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 46788889999999999999753 34679999875421 1123567899999999999999999999999989
Q ss_pred eeeEEEEeccCCCHHHhhcccccc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEE
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAA------QELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
..++||||+++|+|.+++...... ..+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEE
Confidence 999999999999999999755421 1589999999999999999999998 9999999999999999999999
Q ss_pred eeeccccccCCCC-CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccc
Q 016009 273 ADFGIAKFLKPDS-SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350 (397)
Q Consensus 273 ~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 350 (397)
+|||++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--------~~~~ 230 (275)
T cd05046 159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--------VLNR 230 (275)
T ss_pred cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--------HHHH
Confidence 9999987543221 12233456778999999988888999999999999999999 788875332211 0011
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
........+ .....+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 231 ~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQAGKLELP--VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHcCCcCCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111111100 00122346889999999999999999999999986
No 258
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-40 Score=306.46 Aligned_cols=254 Identities=24% Similarity=0.409 Sum_probs=198.8
Q ss_pred cCCCCCccccccCcEEEEEEEeC--------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEe
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCS 195 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 195 (397)
.+|.+.+.||+|+||.||++... .+..||+|.++... .....+++.+|+++++++ +||||+++++++.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 46788899999999999999532 12368999876422 122356889999999999 7999999999999
Q ss_pred cCCeeeEEEEeccCCCHHHhhcccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcE
Q 016009 196 HARHSFLVYEFLKRGSLAAILSSDA-------------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNL 262 (397)
Q Consensus 196 ~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Ni 262 (397)
..+..++++||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 9999999999999999999986532 123588999999999999999999998 999999999999
Q ss_pred EeCCCCcEEEeeeccccccCCCCCCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccc
Q 016009 263 LLDLEFEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISS 339 (397)
Q Consensus 263 ll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~ 339 (397)
++++++.+||+|||+++......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~- 244 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE- 244 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-
Confidence 99999999999999987654322111 12233567999999999889999999999999999998 888875432111
Q ss_pred cccccccccccccCCC-CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 340 SFLNTDIELDEMLDPR-LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 340 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
....+.... ...+. .....+.+++.+||+.+|++|||+.++++.|+
T Consensus 245 -------~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 245 -------LFKLLKEGHRMDKPA----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred -------HHHHHHcCCCCCCCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 011111111 11111 22345889999999999999999999999885
No 259
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.3e-40 Score=297.25 Aligned_cols=239 Identities=23% Similarity=0.416 Sum_probs=186.6
Q ss_pred cccccCcEEEEEEEeC-C-------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 132 CIGNGGHGSVYRAELP-S-------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
.||+|+||.||+|... . ...+++|.+... .....+.+.+|+.+++.++|||++++++++..+...++|
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 5999999999999653 2 234888876431 122346788999999999999999999999998999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc--------EEEeee
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE--------AHVADF 275 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--------~kl~Df 275 (397)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++. ++++||
T Consensus 78 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999997654 2589999999999999999999998 9999999999999987765 699999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCC-CCCCccccccccccccccccccccC
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGK-HPRDFLSSISSSFLNTDIELDEMLD 353 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
|++...... ....++..|+|||.+.+. .++.++||||||+++|||++|. .|+........ .....
T Consensus 153 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~---------~~~~~ 219 (258)
T cd05078 153 GISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK---------LQFYE 219 (258)
T ss_pred ccccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH---------HHHHH
Confidence 988654321 234678889999998864 5789999999999999999985 55443221110 00111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 354 PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 354 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.. ....+.+++.+||+.||++|||++++++.|+
T Consensus 220 ~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLPAP----KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCCCC----CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111111 1235889999999999999999999999885
No 260
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.4e-40 Score=297.37 Aligned_cols=248 Identities=28% Similarity=0.461 Sum_probs=194.6
Q ss_pred ccccccCcEEEEEEEeCC-------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 131 YCIGNGGHGSVYRAELPS-------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+.||+|+||.||+|...+ ++.+++|.+..... ......+.+|+++++.++||||+++++++......++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT---DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc---hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEE
Confidence 358999999999996542 25789998754221 12356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhcccc----ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC-----cEEEee
Q 016009 204 YEFLKRGSLAAILSSDA----AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF-----EAHVAD 274 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-----~~kl~D 274 (397)
|||+++++|.+++.... ....+++.+++.++.|++.||+|||+. +++|+||+|+||+++.++ .++++|
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999999999996532 123478999999999999999999998 999999999999999887 899999
Q ss_pred eccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccc
Q 016009 275 FGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 275 fg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
||++........ ......++..|+|||.+.++.++.++||||||+++|||+| |+.||........ ...+
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~--------~~~~ 226 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV--------LQHV 226 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH--------HHHH
Confidence 999876533221 1122345678999999999999999999999999999998 9999864322110 0000
Q ss_pred cC-CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 352 LD-PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 352 ~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.. .....+ ...+..+.+++.+||+.+|++||++++|++.|+
T Consensus 227 ~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 227 TAGGRLQKP----ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred hcCCccCCc----ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00 111111 123456889999999999999999999999986
No 261
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.1e-40 Score=298.56 Aligned_cols=253 Identities=28% Similarity=0.452 Sum_probs=205.0
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
.++.|+..+.||+|++|.||+|..+ +++.+++|++..... ..+.+.+|+++++.++|+|++++++++......+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence 4556778888999999999999765 688999999864222 3577889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+++||+++++|.+++.... ..+++..++.++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred EEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 9999999999999997654 3699999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
...........++..|+|||.+.+..++.++|+||||+++|+|++|+.|+........ ...+.....+ ...
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~-~~~ 237 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA--------LFLITTKGIP-PLK 237 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHhcCCC-CCc
Confidence 4433333334578899999999888899999999999999999999999864332110 0011111111 011
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
........+.+++.+||+.+|.+|||+.+++++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111234568899999999999999999999864
No 262
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.5e-40 Score=294.69 Aligned_cols=246 Identities=27% Similarity=0.463 Sum_probs=196.5
Q ss_pred cCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
++|+..+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++|||++++++++... ..+++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV------TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 4578889999999999999975 67889999976421 246789999999999999999999998654 479999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++..... ..+++..++.++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 78 ELMSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred ECCCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 99999999999975432 3588999999999999999999998 9999999999999999999999999998754322
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
. .....+..|+|||.+.+..++.++|+||||+++|||++ |+.||........ ........... ..
T Consensus 154 ~---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---------~~~~~~~~~~~--~~ 219 (254)
T cd05083 154 V---DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV---------KECVEKGYRME--PP 219 (254)
T ss_pred C---CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH---------HHHHhCCCCCC--CC
Confidence 1 12234568999999988889999999999999999998 9999864332110 00011111100 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 123356889999999999999999999999886
No 263
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.4e-40 Score=298.56 Aligned_cols=263 Identities=21% Similarity=0.259 Sum_probs=196.3
Q ss_pred HhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
++++|...+.||+|+||.||+|.. .+|+.|++|.+....... ....+.+|+++++.++|+||+++.+++..++..+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 79 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG---VPFTAIREASLLKGLKHANIVLLHDIIHTKETLT 79 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC---CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEE
Confidence 457888999999999999999965 468899999986532211 2346778999999999999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+|+||+. ++|.+++.... ..+++.++..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus 80 lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 80 FVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred EEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccccc
Confidence 9999996 67776664432 3478888999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc------------------
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL------------------ 342 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~------------------ 342 (397)
...........++..|+|||.+.+. .++.++||||||+++|||++|+.||...........
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 4333333344578899999988754 578899999999999999999999864332100000
Q ss_pred ccccccccccCCCCCCCCc---chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 343 NTDIELDEMLDPRLPAPSR---SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..............+.... ........+.+++.+|++.||++|||++|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000000000000000 000113457889999999999999999999863
No 264
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-41 Score=312.03 Aligned_cols=191 Identities=23% Similarity=0.354 Sum_probs=163.7
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
...+|+..+.||+|+||.||+|... +++.||+|.... .....|+.++++++||||+++++++......+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK----------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc----------cccHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence 3457999999999999999999765 577899997432 22356899999999999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+|+||+. ++|.+++.... ..+++.+++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 134 lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 9999995 58888876433 4689999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p 330 (397)
... .......||..|+|||++.+..++.++|||||||++|||+++..|
T Consensus 208 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 208 VVA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred ccC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 322 222345689999999999999999999999999999999986554
No 265
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7.3e-41 Score=309.43 Aligned_cols=255 Identities=22% Similarity=0.297 Sum_probs=196.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||++... +++.||+|.+.... .........+.+|..++..++|+||+++++++...+..++|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-MLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 46888899999999999999754 68899999986411 11122345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred EeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999997533 3588999999999999999999998 999999999999999999999999999976654
Q ss_pred CCCC-cccccccccccCcccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccC--CC
Q 016009 284 DSSN-WTEFAGTYGYVAPELAYT-----MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PR 355 (397)
Q Consensus 284 ~~~~-~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 355 (397)
.... .....|++.|+|||++.+ +.++.++||||||+++|||++|+.||....... ....+.. .+
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--------~~~~i~~~~~~ 226 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE--------TYGKIMNHEER 226 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH--------HHHHHHcCCCc
Confidence 3322 233568999999998875 467889999999999999999999986432211 0111111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPES--RPTMKIVSQQ 394 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~~vl~~ 394 (397)
.+.+ ....+....+.+++.+|+..++++ |+++++++++
T Consensus 227 ~~~p-~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 227 FQFP-SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ccCC-CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 1111 111123455788888988866554 4688888764
No 266
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=305.31 Aligned_cols=247 Identities=26% Similarity=0.442 Sum_probs=202.7
Q ss_pred CCccccccCcEEEEEEEeCC---CC--EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 129 AQYCIGNGGHGSVYRAELPS---GQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~~---~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
..++||.|.||.||+|.+.+ |+ .||||.-+.... ..+.+.|+.|..+|++++||||++++|+|.. ...|+|
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t---~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wiv 468 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT---PDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIV 468 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC---hhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEE
Confidence 44679999999999996532 33 588888765433 3347889999999999999999999999965 467999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||.++-|.|..+|..+.. .++......++.||+.||+|||+. ..|||||..+|||+....-+||+|||+++.+..
T Consensus 469 mEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 999999999999987764 688889999999999999999999 999999999999999999999999999999886
Q ss_pred CCCCccc-ccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc-CCCCCCCC
Q 016009 284 DSSNWTE-FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEML-DPRLPAPS 360 (397)
Q Consensus 284 ~~~~~~~-~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 360 (397)
+...... ..-...|||||.+.-.+++.+||||.|||++||++. |..||........ +..+- ..+++.|+
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------I~~iEnGeRlP~P~ 615 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------IGHIENGERLPCPP 615 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------EEEecCCCCCCCCC
Confidence 6544332 233668999999999999999999999999999986 9999875443211 11111 23445444
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.++..+..|+.+||+.+|.+||++.++...|.
T Consensus 616 ----nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 616 ----NCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred ----CCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 44556889999999999999999999988763
No 267
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6e-40 Score=296.06 Aligned_cols=248 Identities=27% Similarity=0.413 Sum_probs=199.7
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
-|+..+.||+|+||.||+|.. .++..+|+|.+..... ....+.+.+|++++++++||||+++++++..+...++||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 466678899999999999965 4788999998754221 123467889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.. ..+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 82 EYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 99999999999864 2488999999999999999999998 9999999999999999999999999998765543
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........++..|+|||.+.+..++.++|+||||+++|+|++|..|+......... ..+.....+ ....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~--------~~~~~~~~~---~~~~ 223 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL--------FLIPKNNPP---TLEG 223 (277)
T ss_pred hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH--------HHHhcCCCC---CCCc
Confidence 32333456788999999998888999999999999999999999998643321100 000000000 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.+|++||++.+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 233558899999999999999999999874
No 268
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-40 Score=308.56 Aligned_cols=255 Identities=23% Similarity=0.311 Sum_probs=195.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|+||.||++..+ +++.+|+|.+..... ........+..|+.++..++|+||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH-HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 36888899999999999999765 578899999753111 1112234578899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 80 ~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred EeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999997533 3589999999999999999999998 999999999999999999999999999876543
Q ss_pred CCC-CcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC--C
Q 016009 284 DSS-NWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP--R 355 (397)
Q Consensus 284 ~~~-~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 355 (397)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...+... .
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~--------~~~i~~~~~~ 226 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGKIMNHKER 226 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH--------HHHHhCCCcc
Confidence 322 223357899999999886 34578999999999999999999999864332110 1111110 0
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPES--RPTMKIVSQQ 394 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPt~~~vl~~ 394 (397)
...+ .........+.+++.+|+..+|++ ||++++++++
T Consensus 227 ~~~p-~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 FQFP-AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccCC-CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1111 111123345778888877654444 6899998765
No 269
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.3e-40 Score=299.87 Aligned_cols=262 Identities=25% Similarity=0.364 Sum_probs=197.2
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||.|++|.||+|... +|+.|++|++...... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc--cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence 4777889999999999999654 7899999998643221 123457889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+. ++|.+++..... ..+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 79 EFLH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred eccc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9996 689888865432 4689999999999999999999998 9999999999999999999999999998765543
Q ss_pred CCCcccccccccccCcccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCcccccccccc------ccccc----cccccC
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL------NTDIE----LDEMLD 353 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~------~~~~~----~~~~~~ 353 (397)
........++..|+|||...+.. ++.++||||||+++|||+||+.||........... ..... .....+
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 33334445788999999887644 58899999999999999999999854322110000 00000 000000
Q ss_pred --CCCCC-CCcch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 354 --PRLPA-PSRSV----QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 354 --~~~~~-~~~~~----~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+. ..... ......+.+++.+||+.||++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000 00000 0122457789999999999999999999864
No 270
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.5e-40 Score=301.71 Aligned_cols=255 Identities=22% Similarity=0.263 Sum_probs=196.5
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|...+.||+|+||.||++... +++.|++|.+..... ......+.+.+|+++++.++||||+++++.+..++..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 36888899999999999999654 678999998764221 1122346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++.... .+++..+..++.+++.||+|||+. +++|+||||+||+++.++.++|+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 80 MEYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999996543 589999999999999999999998 999999999999999999999999998864211
Q ss_pred CCC---------------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccc
Q 016009 284 DSS---------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIEL 348 (397)
Q Consensus 284 ~~~---------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 348 (397)
... ......++..|+|||.+.+..++.++|+||||+++|||++|..||...... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~--------~~~ 225 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--------ELF 225 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHH
Confidence 100 011235678899999998888999999999999999999999998532210 001
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 349 DEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
..........+... ...+..+.+++.+||+.||++||++.++.+.|
T Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 226 GQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred HHHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 11111111111110 12334588999999999999999965554444
No 271
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.1e-40 Score=301.14 Aligned_cols=263 Identities=24% Similarity=0.310 Sum_probs=199.2
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCc-chhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSD-QIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+|+..+.||+|++|.||+|... +|+.|++|.+....... .......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3667788999999999999754 68999999987533221 111245677899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+ +++|.+++.... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999997543 3589999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-----cc--cccc------ccc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-----FL--NTDI------ELD 349 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-----~~--~~~~------~~~ 349 (397)
.........++..|+|||.+.+ ..++.++||||||+++|||++|..||......... .. .... ...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 4333334456788999998864 45789999999999999999998776533321100 00 0000 000
Q ss_pred cccCCCCCCC---CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 350 EMLDPRLPAP---SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 350 ~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.........+ ..........+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 00111224568899999999999999999999875
No 272
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.3e-40 Score=298.98 Aligned_cols=247 Identities=26% Similarity=0.348 Sum_probs=200.3
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||++... +++.+|+|.+..... ......+.+.+|++++++++||||+++++++..++..++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI-VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 36788899999999999999654 689999999864211 1122356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 80 MEYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred EecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 9999999999998664 3589999999999999999999998 999999999999999999999999999887543
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
. .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||....... ....+.......+..
T Consensus 154 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 220 (290)
T cd05580 154 R---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ--------IYEKILEGKVRFPSF-- 220 (290)
T ss_pred C---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCccCCcc--
Confidence 3 233468899999999988888999999999999999999999986433210 111111222221111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRP-----TMKIVSQ 393 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RP-----t~~~vl~ 393 (397)
....+.+++.+||+.||++|| +++|+++
T Consensus 221 --~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 221 --FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred --CCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 234588999999999999999 7788764
No 273
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7e-40 Score=293.44 Aligned_cols=252 Identities=28% Similarity=0.426 Sum_probs=200.5
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|...+.||+|+||.||+|.. .+++.|++|.++..... ....+.+..|++++++++|+||+++++++.+.+..++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE
Confidence 467778899999999999965 47899999998753322 234678999999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.... .+++..+..++.+++.||+|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 79 EYCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred ecCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999999987543 478899999999999999999998 9999999999999999999999999998876543
Q ss_pred CCCc----ccccccccccCcccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 285 SSNW----TEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 285 ~~~~----~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
.... ....++..|+|||++.+.. ++.++||||||++++|+++|+.||........... .......+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~ 228 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMF----HVGAGHKPPIP 228 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHH----HHhcCCCCCCC
Confidence 3221 1346788999999988766 88999999999999999999999864321100000 00111111121
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.. ......+.+++.+||+.+|++|||+.+++.
T Consensus 229 ~~----~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 229 DS----LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cc----cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 112345778999999999999999999975
No 274
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.4e-40 Score=293.10 Aligned_cols=252 Identities=26% Similarity=0.385 Sum_probs=199.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCC-cchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPS-DQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+|+..+.||+|++|.||+|... +++.|++|.+...... ......+.+.+|+++++.++|+|++++.+++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3666788999999999999765 7899999987642211 1122346789999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999986543 488999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCcccccccccccCcccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||........... ... ....+. .
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~-----~~~--~~~~~~---~ 223 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK-----IGR--SKELPP---I 223 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH-----HHh--cccCCC---c
Confidence 32 223456788999999987766 89999999999999999999999864432111000 000 001110 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 224 PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 11223457889999999999999999999864
No 275
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.8e-40 Score=292.77 Aligned_cols=252 Identities=22% Similarity=0.339 Sum_probs=196.9
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCC-cchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--Cee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPS-DQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 200 (397)
++|+..+.||+|+||.||+|.. .++..|++|.+...... ......+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688889999999999999965 46899999987642221 1122346788999999999999999999988663 467
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+++|||+++++|.+++.... .+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999986543 478889999999999999999998 999999999999999999999999999876
Q ss_pred cCCCC---CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccccc-CCCC
Q 016009 281 LKPDS---SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML-DPRL 356 (397)
Q Consensus 281 ~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 356 (397)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||........ ..... .+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~ 227 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--------IFKIATQPTN 227 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--------HHHHhcCCCC
Confidence 54211 112334688899999999888899999999999999999999999864322110 01111 1111
Q ss_pred CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 357 PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 357 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+ .........+.+++.+|+. +|++||+++||+++
T Consensus 228 ~---~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 228 P---VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred C---CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 1 1112334567788889985 99999999999875
No 276
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.3e-40 Score=299.91 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=195.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|+||.||+|... +|+.+++|.+...... ......+.+|++++++++|||++++++++.+....++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc--ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence 3677788999999999999664 7899999998643221 122356788999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||++ ++|.+++.... ..+++..++.++.|+++||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 79 EYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred ecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 9997 47877775433 3589999999999999999999998 9999999999999999999999999999865543
Q ss_pred CCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc--------cccc---cccccc
Q 016009 285 SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL--------NTDI---ELDEML 352 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~--------~~~~---~~~~~~ 352 (397)
........++..|+|||.+.+. .++.++||||||+++|||+||..|+........... .... ......
T Consensus 153 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 153 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 3333445678899999988764 468999999999999999999988532211100000 0000 000000
Q ss_pred CC-CCCCCCc------chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 DP-RLPAPSR------SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 ~~-~~~~~~~------~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+. ..+.... ........+.+++.+||+.||.+|||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 00 0000000 001223567899999999999999999999875
No 277
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7.3e-40 Score=291.95 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=199.8
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||++.. .+++.+++|.+..... .....+.+.+|++++++++|||++++++.+..++..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM--TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence 467788999999999999965 4788999999865322 2223578999999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-CcEEEeeeccccccCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGIAKFLKP 283 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~ 283 (397)
||+++++|.+++..... ..+++..+..++.+++.|+.|||++ +++|+||+|+||+++++ +.++|+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 79 EYAPGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred ecCCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 99999999999976432 4589999999999999999999998 99999999999999865 4689999999986643
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||+...... ..............
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~--- 222 (256)
T cd08220 155 KS-KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--------LVLKIMSGTFAPIS--- 222 (256)
T ss_pred Cc-cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--------HHHHHHhcCCCCCC---
Confidence 32 2233467889999999998889999999999999999999999986432210 01111111111000
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.+|++|||++|++++
T Consensus 223 ~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 223 DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1123458899999999999999999999874
No 278
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.4e-40 Score=307.87 Aligned_cols=260 Identities=23% Similarity=0.355 Sum_probs=194.6
Q ss_pred HHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC---
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--- 197 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--- 197 (397)
...++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3457899999999999999999964 5788999999864321 122345678999999999999999999987533
Q ss_pred ---CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEee
Q 016009 198 ---RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVAD 274 (397)
Q Consensus 198 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 274 (397)
...++++|++ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcC
Confidence 4568999987 7899888753 3489999999999999999999998 999999999999999999999999
Q ss_pred eccccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------ccccc
Q 016009 275 FGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------LNTDI 346 (397)
Q Consensus 275 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------~~~~~ 346 (397)
||++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .....
T Consensus 162 fg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07878 162 FGLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238 (343)
T ss_pred CccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999865432 233468999999999876 568899999999999999999999986432210000 00000
Q ss_pred ccccc-------cCCCCCC-CCcch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEM-------LDPRLPA-PSRSV----QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~-------~~~~~~~-~~~~~----~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+ ....++. +.... ......+.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000 00000 0112347799999999999999999999864
No 279
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.1e-40 Score=295.21 Aligned_cols=251 Identities=26% Similarity=0.453 Sum_probs=198.5
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCC----EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
.+|...+.||+|+||.||+|... +|. .+|+|.+..... ......+.+|+.++++++|||++++++++.. ..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS---PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 46778899999999999999754 333 589998764322 2335678899999999999999999999987 78
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||++.
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred eEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 899999999999999997644 2489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCcc--cccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC-CC
Q 016009 280 FLKPDSSNWT--EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD-PR 355 (397)
Q Consensus 280 ~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 355 (397)
.......... ...++..|+|||......++.++|+||||+++||+++ |+.||+....... ...+.. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------~~~~~~~~~ 229 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI--------PDLLEKGER 229 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH--------HHHHhCCCC
Confidence 7653322211 1223568999999988889999999999999999999 9999864322110 001111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+.+.. ....+.+++.+||..+|++|||+.++++.|+
T Consensus 230 ~~~~~~----~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 230 LPQPPI----CTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CCCCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111111 2235788999999999999999999998874
No 280
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.6e-40 Score=297.41 Aligned_cols=249 Identities=25% Similarity=0.393 Sum_probs=198.7
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.|...+.||+|++|.||++.. .+++.+++|++.... ....+.+.+|+.+++.++|||++++++++...+..++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence 345567899999999999965 478899999875321 123466889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.. ..+++.++..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.+......
T Consensus 96 e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 96 EFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred eccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 99999999999865 2488999999999999999999998 9999999999999999999999999988765433
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........|+..|+|||...+..++.++||||||+++|||++|+.||.......... .......+....+ .
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~----~ 239 (285)
T cd06648 169 VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-----RIRDNLPPKLKNL----H 239 (285)
T ss_pred CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-----HHHhcCCCCCccc----c
Confidence 333334568899999999988889999999999999999999999985432211000 0001111111111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.+|++|||+.+++++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 133468899999999999999999999863
No 281
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.9e-40 Score=301.12 Aligned_cols=250 Identities=26% Similarity=0.455 Sum_probs=195.8
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCC----EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQ----VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
++|+..+.||+|+||.||+|.. .+|. .+|+|.+..... .....++.+|+.+++.++||||+++++++... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG---PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 4677888999999999999965 3454 478888764221 22245688999999999999999999998754 4
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++++||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||++.
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccc
Confidence 679999999999999986543 3588999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccccc--CC
Q 016009 280 FLKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEML--DP 354 (397)
Q Consensus 280 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 354 (397)
........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||....... ....+ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---------~~~~~~~~~ 228 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---------IPDLLEKGE 228 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---------HHHHHHCCC
Confidence 66433221 122345678999999988889999999999999999997 899986432110 00111 11
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..+.+. .....+.+++..||..+|++||+++++++.|+
T Consensus 229 ~~~~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 229 RLPQPP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 12345889999999999999999999999875
No 282
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.6e-40 Score=298.44 Aligned_cols=261 Identities=21% Similarity=0.325 Sum_probs=195.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||+|..+ +++.||+|.+....... ....+.+|++++++++|+||+++++++..++..++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG---APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC---CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 57888899999999999999765 78999999986532211 134567899999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||+++ +|.+++.... ..+++.....++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 82 FEYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred EecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 999985 9999886543 3588999999999999999999998 999999999999999999999999999875433
Q ss_pred CCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc------c--cccccc------
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF------L--NTDIEL------ 348 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~------~--~~~~~~------ 348 (397)
.........++..|+|||...+ ..++.++||||+|+++|||++|+.||.......... . ......
T Consensus 156 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 156 PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 2222233356788999998875 457899999999999999999999986433110000 0 000000
Q ss_pred ccccCCCCCCC-Ccch------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 DEMLDPRLPAP-SRSV------QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 ~~~~~~~~~~~-~~~~------~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
........... .... ......+.+++.+|++.+|++|||+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000000 0000 0011457789999999999999999999864
No 283
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.3e-40 Score=295.89 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=197.2
Q ss_pred cCCCCCccccccCcEEEEEEEeCC----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
++|...+.||+|+||.||+|...+ ...|++|....... ....+.+.+|+.++++++|||++++++++.. ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 357778899999999999997543 24689998764321 2235678999999999999999999999875 457
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+++|+|.+++.... ..+++.+++.++.+++.||.|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 89999999999999996543 3589999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCC-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCCCCCC
Q 016009 281 LKPDSSN-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDPRLPA 358 (397)
Q Consensus 281 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
....... .....++..|+|||.+....++.++||||||+++||+++ |..||.......... .... ....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-----~~~~--~~~~~~ 229 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-----RIEN--GERLPM 229 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-----HHHc--CCcCCC
Confidence 5433221 112234568999999988889999999999999999986 999986443211000 0000 011111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 359 PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 359 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+. ..+..+.+++.+|+..+|++|||+.++++.|+
T Consensus 230 ~~----~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 230 PP----NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 22346889999999999999999999999875
No 284
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.6e-40 Score=294.99 Aligned_cols=257 Identities=25% Similarity=0.402 Sum_probs=198.4
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcc------hhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQ------IVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
+|...+.||+|+||.||+|.. .+|+.+|+|.++....... ....+.+..|++++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 356678899999999999964 4789999998754221111 111346788999999999999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999998765 3589999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCC--CcccccccccccCcccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 016009 279 KFLKPDSS--NWTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354 (397)
Q Consensus 279 ~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
........ ......++..|+|||.+.... ++.++|+||||+++||+++|..|+.............. . ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~--~~ 229 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN----K--RS 229 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhc----c--cc
Confidence 76442211 122345788999999887654 78999999999999999999999863322110000000 0 00
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+.....+....+.+++.+||+.+|++|||+++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 230 APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0111111112334568899999999999999999999875
No 285
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.3e-40 Score=319.74 Aligned_cols=262 Identities=17% Similarity=0.260 Sum_probs=191.5
Q ss_pred HHHHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccC------Cceeee
Q 016009 118 DEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH------RNIVKL 190 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~ 190 (397)
+++...+++|.+.+.||+|+||+||+|.. .+++.||||+++... .....+..|+++++.++| ++++.+
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i 196 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKI 196 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeee
Confidence 34445678899999999999999999965 468899999986421 113445667777777754 458889
Q ss_pred EEEEecC-CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceeccCCCCcEEeCCCC
Q 016009 191 YGFCSHA-RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHRDISSKNLLLDLEF 268 (397)
Q Consensus 191 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~ 268 (397)
++++... ...++|||++ +++|.+++... ..+++..+..++.||+.||.|||+ . +|+||||||+|||++.++
T Consensus 197 ~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 197 QRYFQNETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSD 269 (467)
T ss_pred EEEEEcCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCC
Confidence 9988765 5788999987 77888888654 358999999999999999999997 5 899999999999998765
Q ss_pred ----------------cEEEeeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 016009 269 ----------------EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 332 (397)
Q Consensus 269 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~ 332 (397)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 270 ~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 270 TVVDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cccccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 49999999876422 22234678999999999999999999999999999999999999996
Q ss_pred ccccccc-------------ccccc--ccccccccC------CCCCCC-------Ccch--HHHHHHHHHHHHHccCCCC
Q 016009 333 FLSSISS-------------SFLNT--DIELDEMLD------PRLPAP-------SRSV--QEKLRSIVEVVFSCLNESP 382 (397)
Q Consensus 333 ~~~~~~~-------------~~~~~--~~~~~~~~~------~~~~~~-------~~~~--~~~~~~l~~l~~~cl~~~P 382 (397)
....... .+... ......+.+ +..... .... ......+.+|+.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 4332110 00000 000000000 000000 0000 0112457799999999999
Q ss_pred CCCCCHHHHHHH
Q 016009 383 ESRPTMKIVSQQ 394 (397)
Q Consensus 383 ~~RPt~~~vl~~ 394 (397)
++|||++|++++
T Consensus 427 ~~R~ta~e~L~H 438 (467)
T PTZ00284 427 QKRLNARQMTTH 438 (467)
T ss_pred hhCCCHHHHhcC
Confidence 999999999874
No 286
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.7e-40 Score=311.42 Aligned_cols=255 Identities=22% Similarity=0.262 Sum_probs=194.8
Q ss_pred hcCCCCCccccccCcEEEEEEEeC---CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 200 (397)
..+|.+.+.||+|+||.||++... .+..|++|.+... ....+|++++++++||||+++++++......
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 347889999999999999999643 4578999987531 2346899999999999999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+++||++. ++|.+++... ..+++.+++.++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++..
T Consensus 162 ~lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACK 234 (392)
T ss_pred EEEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccc
Confidence 99999985 6888888432 4589999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCCC--cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccc----------------cccc
Q 016009 281 LKPDSSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSIS----------------SSFL 342 (397)
Q Consensus 281 ~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~----------------~~~~ 342 (397)
....... .....||..|+|||++.+..++.++|||||||++|||++|+.||....... ..+.
T Consensus 235 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 235 LDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred cCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 5543221 234578999999999999899999999999999999999999985332110 0000
Q ss_pred ccc-c----c---cccccCCCCCCCCc-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 343 NTD-I----E---LDEMLDPRLPAPSR-SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 343 ~~~-~----~---~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
... . . ......+....+.. ........+.+++.+||..||++|||+.|++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 0 0 00000000000000 000123457889999999999999999999864
No 287
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=298.11 Aligned_cols=248 Identities=22% Similarity=0.357 Sum_probs=211.2
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
-|...+.||+|.|..|-++++ =+|..||||++.+.. ........+.+|++.|+.++|||||+++.+..+...+|||+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTK--lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK--LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccc--cchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 466677899999999998853 389999999997522 23345678999999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC-CCcEEEeeeccccccCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKP 283 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~ 283 (397)
|.=++|+|.+++..+.. .+++....+++.||+.|+.|+|+. .+|||||||+||.+.+ -|-+||+|||++..+.+
T Consensus 97 ELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999977653 488999999999999999999999 8999999999998865 47899999999988775
Q ss_pred CCCCcccccccccccCcccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKIT-EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
+. ...+.+|+..|-|||++.+..|+ ++.|||||||+||.|++|+.||+.... .+.+..++|-....|
T Consensus 172 G~-kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND--------SETLTmImDCKYtvP--- 239 (864)
T KOG4717|consen 172 GK-KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND--------SETLTMIMDCKYTVP--- 239 (864)
T ss_pred cc-hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc--------hhhhhhhhcccccCc---
Confidence 54 44667999999999999998875 589999999999999999999975432 344556666655544
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.....+..+||..||..||++|.+.++|+.
T Consensus 240 -shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 240 -SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 355667899999999999999999999875
No 288
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-39 Score=290.28 Aligned_cols=249 Identities=29% Similarity=0.489 Sum_probs=198.2
Q ss_pred CCCccccccCcEEEEEEEeCC-----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 128 DAQYCIGNGGHGSVYRAELPS-----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
++.+.||.|+||.||++...+ +..||+|.+...... ...+.+..|+++++.++|+|++++++++...+..++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE---QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh---HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 456789999999999997653 388999998653221 135788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
+|||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 79 i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 9999999999999875432 2289999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCCcc-cccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccCC-CCCCC
Q 016009 283 PDSSNWT-EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLDP-RLPAP 359 (397)
Q Consensus 283 ~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 359 (397)
....... ...++..|+|||...+..++.++||||+|+++++|++ |..|+....... ....+... ....+
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~ 226 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE--------VLEYLKKGYRLPKP 226 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhcCCCCCCC
Confidence 4322111 2236789999999988889999999999999999998 788876422110 00111111 11111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
. ..+..+.+++.+|++.||++|||+.|+++.|
T Consensus 227 ~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 E----NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred C----cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1 1345688999999999999999999999875
No 289
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-39 Score=292.81 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=200.8
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCc--chhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSD--QIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
+|+..+.||+|++|.||++.. .+++.||+|.+....... .....+.+..|++++++++|+|++++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467788899999999999964 578999999986433211 11235678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC-cEEEeeecccccc
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFL 281 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 281 (397)
|+||+++++|.+++.... ++++..+..++.|++.||.|||+. +++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999986543 588999999999999999999998 999999999999998776 5999999998776
Q ss_pred CCCCC----CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 282 KPDSS----NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 282 ~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
..... ......++..|+|||.+.+..++.++||||+|+++++|++|..||......... ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~-- 227 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-----ALIFKIASAT-- 227 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-----HHHHHHhccC--
Confidence 54321 112346788999999998888999999999999999999999998633211000 0000000000
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
............+.+++.+|++.+|++|||+.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 0111112344568899999999999999999999863
No 290
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.4e-39 Score=299.47 Aligned_cols=193 Identities=22% Similarity=0.377 Sum_probs=157.7
Q ss_pred ccccccCcEEEEEEEeC---CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe--cCCeeeEEEE
Q 016009 131 YCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS--HARHSFLVYE 205 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e 205 (397)
..||+|+||.||+|... ++..||+|.+.... ....+.+|++++++++||||+++++++. .+...++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 56999999999999764 45789999886421 1345788999999999999999999884 4567899999
Q ss_pred eccCCCHHHhhcccc------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEe----CCCCcEEEeee
Q 016009 206 FLKRGSLAAILSSDA------AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLL----DLEFEAHVADF 275 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~Df 275 (397)
|+.+ +|.+++.... ....+++..++.++.|++.||.|||+. +++||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9875 7777664221 123588999999999999999999998 99999999999999 56678999999
Q ss_pred ccccccCCCCC---CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCc
Q 016009 276 GIAKFLKPDSS---NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDF 333 (397)
Q Consensus 276 g~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~ 333 (397)
|+++....... ......+|..|+|||.+.+. .++.++||||||+++|||+||+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99986643322 22345688999999988764 578999999999999999999999863
No 291
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.8e-39 Score=297.38 Aligned_cols=249 Identities=29% Similarity=0.433 Sum_probs=196.1
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
..|...+.||+|+||.||+|... +++.||+|.+..... ......+.+.+|+++++.++|||++++.+++..++..++|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc-CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 45778889999999999999654 689999999864222 1222346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
|||++ |++.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99997 57777665433 3589999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
. ....++..|+|||.+. ...++.++||||||+++|||+||+.|+.......... .+.....+ .
T Consensus 168 ~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~--------~~~~~~~~--~ 233 (307)
T cd06607 168 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--------HIAQNDSP--T 233 (307)
T ss_pred C----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH--------HHhcCCCC--C
Confidence 2 2346788999999874 4568889999999999999999999976433211100 00000000 1
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+...+.+++.+||+.+|++||++.+|+.+
T Consensus 234 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1112345568999999999999999999999874
No 292
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.7e-40 Score=292.84 Aligned_cols=252 Identities=23% Similarity=0.338 Sum_probs=200.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|+||.||++... +|..+|+|.+..... .....+.+.+|++++++++|+|++++++.+......++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence 4677788999999999999664 688999999864211 1123567889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc-EEEeeeccccccCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE-AHVADFGIAKFLKP 283 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~~~~~~~ 283 (397)
||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||++++++. ++|+|||.+.....
T Consensus 79 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 79 EYCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred ecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999999999865432 3579999999999999999999998 9999999999999998864 69999999887654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........|++.|+|||...+..++.++|+||||++++||++|..|+....... ..............
T Consensus 155 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~--- 223 (257)
T cd08225 155 SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ--------LVLKICQGYFAPIS--- 223 (257)
T ss_pred CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHhcccCCCCC---
Confidence 3333334568889999999988889999999999999999999999986432111 01111111111100
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+||+.+|++|||++|++++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1123458899999999999999999999874
No 293
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.5e-40 Score=296.78 Aligned_cols=261 Identities=25% Similarity=0.322 Sum_probs=197.0
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||.|++|.||+|.. .+|..|++|++...... ......+.+|++++++++|||++++++++..++..+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED--EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc--ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence 55678899999999999965 47999999998653221 1224568899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|++ ++|.+++..... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 79 FLD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred ccC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 995 689998865442 3589999999999999999999998 99999999999999999999999999997654333
Q ss_pred CCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc-------cccc------cccc-
Q 016009 286 SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL-------NTDI------ELDE- 350 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~-------~~~~------~~~~- 350 (397)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||........... .... ...+
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 333334568899999987654 578899999999999999999999864332110000 0000 0000
Q ss_pred ---ccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 351 ---MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 351 ---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...................+.+++.+|++.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000000011223568899999999999999999999864
No 294
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-39 Score=295.89 Aligned_cols=261 Identities=26% Similarity=0.400 Sum_probs=199.9
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||+|... +++.|++|.++.... .....+.+.+|++++++++|+||+++++++..++..+++|
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 6788889999999999999765 688999999864322 1223577899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||++++.+..+.... ..+++.++..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 80 EYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999987777665432 3489999999999999999999998 9999999999999999999999999998876544
Q ss_pred CC-CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccc----------------ccccc
Q 016009 285 SS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF----------------LNTDI 346 (397)
Q Consensus 285 ~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~----------------~~~~~ 346 (397)
.. ......++..|+|||++.+. .++.++||||||+++|+|++|+.||.......... .....
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 32 23345678899999999887 78999999999999999999999986432211000 00000
Q ss_pred ccc--cccCCCCCC--CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELD--EMLDPRLPA--PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~--~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
... ...+..... ...........+.+++.+||+.+|++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000 000000000 000001124668999999999999999999999864
No 295
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.6e-39 Score=294.42 Aligned_cols=262 Identities=20% Similarity=0.331 Sum_probs=198.9
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||.|++|.||+|... +|+.||+|.+...... .....+.+|++++++++|+|++++++++...+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE---GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc---cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence 4777889999999999999765 6889999998753321 22456788999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++ +|.+++........+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 99985 8888886554335689999999999999999999998 9999999999999999999999999999765443
Q ss_pred CCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccc--c-----ccccccccccc-----
Q 016009 285 SSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--S-----FLNTDIELDEM----- 351 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--~-----~~~~~~~~~~~----- 351 (397)
........++..|++||.+.+. .++.++||||||+++|+|++|+.||........ . ..........+
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 3333344678899999987654 468899999999999999999999864322100 0 00000000000
Q ss_pred cCCCCCCCCc-----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 352 LDPRLPAPSR-----SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 352 ~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.... ........+.+++.+|++.||++||++.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0001110000 001223567899999999999999999999863
No 296
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.7e-39 Score=287.22 Aligned_cols=250 Identities=32% Similarity=0.494 Sum_probs=202.8
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||++... +++.+++|++..... ...+.+.+|++++++++|+|++++++++......++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4667788999999999999765 788999999875322 24578999999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++.... ..+++..+..++.+++.|+.|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 77 e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 77 EFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred ecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 9999999999987653 4689999999999999999999998 9999999999999999999999999998876543
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
.. .....++..|+|||.+.+..++.++||||||+++++|++|+.|+............ ....-+..... .
T Consensus 152 ~~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~----~ 221 (253)
T cd05122 152 KA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKI-----ATNGPPGLRNP----E 221 (253)
T ss_pred cc-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-----HhcCCCCcCcc----c
Confidence 32 33456888999999998888999999999999999999999998644221110000 00000111111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.||++|||+.|++++
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 123458899999999999999999999864
No 297
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.3e-39 Score=293.84 Aligned_cols=246 Identities=24% Similarity=0.292 Sum_probs=192.9
Q ss_pred ccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||+|+||+||++.. .+|+.+++|.+...... .......+..|++++++++|||++++++++...+..++||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 68999999999964 47899999998642211 11234567789999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccc
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 291 (397)
|.+++..... ..+++.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+..... .......
T Consensus 80 L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~ 154 (277)
T cd05577 80 LKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGR 154 (277)
T ss_pred HHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCccccc
Confidence 9999875442 4589999999999999999999998 999999999999999999999999999876543 2222334
Q ss_pred cccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccc-ccCCCCCCCCcchHHHHHHH
Q 016009 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDE-MLDPRLPAPSRSVQEKLRSI 370 (397)
Q Consensus 292 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 370 (397)
.++..|+|||...+..++.++||||||+++++|++|+.||........ ...+.. ....... ........+
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~ 225 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-----KEELKRRTLEMAVE----YPDKFSPEA 225 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-----HHHHHhcccccccc----CCccCCHHH
Confidence 678899999999888899999999999999999999999864332100 000000 1111111 111224458
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHH
Q 016009 371 VEVVFSCLNESPESRP-----TMKIVSQ 393 (397)
Q Consensus 371 ~~l~~~cl~~~P~~RP-----t~~~vl~ 393 (397)
.+++.+||+.||++|| ++.++++
T Consensus 226 ~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 226 KDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHHccCChhHccCCCcccHHHHHh
Confidence 8999999999999999 6666765
No 298
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.7e-39 Score=294.38 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=199.5
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||+|.. .+|+.|++|++...... ......+.+|+.++++++|||++++++++..+...++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE--GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc--chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence 467788899999999999975 47899999998753321 123567899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+ +++|.+++.... ..+++.+++.++.|+++||+|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 79 e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 79 EYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred ccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 999 999999986543 4689999999999999999999998 9999999999999999999999999998876543
Q ss_pred CC-CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccc--------------ccccc--cc
Q 016009 285 SS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--------------SFLNT--DI 346 (397)
Q Consensus 285 ~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--------------~~~~~--~~ 346 (397)
.. ......++..|+|||.+.+. .++.++||||+|++++||+||..||........ .+... ..
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 21 23345688999999988654 468999999999999999999887753321100 00000 00
Q ss_pred ccccccCCCCCC-C-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEMLDPRLPA-P-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~~~~~~~~-~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+..+.... + .....+....+.+++.+|++.+|++|||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000 0 00001223678999999999999999999999875
No 299
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.9e-39 Score=295.28 Aligned_cols=262 Identities=23% Similarity=0.288 Sum_probs=197.6
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--Ceee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHSF 201 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 201 (397)
++|+..+.||+|+||.||+|..+ +++.+++|.++..... ......+.+|++++++++||||+++++++... +..+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 46888899999999999999765 6889999998753322 12234677899999999999999999998777 8899
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+||||+++ +|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++...
T Consensus 83 lv~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred EEehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 99999974 9988886543 2589999999999999999999998 9999999999999999999999999998876
Q ss_pred CCCCCCcccccccccccCcccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCccccccccc-----cc--cc------cc
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-----LN--TD------IE 347 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-----~~--~~------~~ 347 (397)
...........++..|+|||.+.+.. ++.++|+||||+++|||++|+.||.......... .. .. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 157 GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred cCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 54433334456788999999887544 6889999999999999999999986432211000 00 00 00
Q ss_pred ccccc-----CCCCCCCCcchHH--HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 348 LDEML-----DPRLPAPSRSVQE--KLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 348 ~~~~~-----~~~~~~~~~~~~~--~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+.... ............. ....+.+++.+||+.||++|||+.|++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000 0000000000011 24457899999999999999999999864
No 300
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2e-39 Score=293.58 Aligned_cols=253 Identities=23% Similarity=0.391 Sum_probs=193.0
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHH-HHhccCCceeeeEEEEecCCeeeE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEA-LTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
++|++.+.||+|+||.||++... +|+.||+|.+....... ...++..|+.+ ++..+|||++++++++..++..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ---EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH---HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEE
Confidence 46888899999999999999664 69999999987532221 23456667665 566689999999999999999999
Q ss_pred EEEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 203 VYEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+|||++ |+|.+++.... ....+++..++.++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++...
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999996 68887775422 2246899999999999999999999852 7999999999999999999999999998765
Q ss_pred CCCCCCcccccccccccCcccccC----CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYT----MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
.... ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||....... ...........+
T Consensus 155 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~ 226 (283)
T cd06617 155 VDSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-------QQLKQVVEEPSP 226 (283)
T ss_pred cccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-------HHHHHHHhcCCC
Confidence 4221 1223467889999998764 446889999999999999999999986322100 011111111111
Q ss_pred -CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 -APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 -~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+. ...+..+.+++.+||+.+|++||++.+++++
T Consensus 227 ~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 227 QLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 1234568899999999999999999999863
No 301
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=308.30 Aligned_cols=244 Identities=27% Similarity=0.403 Sum_probs=199.7
Q ss_pred cccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCC
Q 016009 132 CIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRG 210 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 210 (397)
+||+|.||+||-|+.. +...+|||.+.... ....+.+..|+.+-++++|.|||+++|.+..++..-+.||-++||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd----sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD----SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc----chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 5999999999999655 45678999876422 233577899999999999999999999999999999999999999
Q ss_pred CHHHhhccccccCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC-CCCcEEEeeeccccccCCCCCC
Q 016009 211 SLAAILSSDAAAQEL--GWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD-LEFEAHVADFGIAKFLKPDSSN 287 (397)
Q Consensus 211 ~L~~~l~~~~~~~~l--~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~ 287 (397)
||.++|+..- +++ ++..+-.+.+||++||.|||.+ .|||||||-+|||++ -.|.+||+|||-++.+..-...
T Consensus 658 SLSsLLrskW--GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 658 SLSSLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred cHHHHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 9999997643 345 7788889999999999999999 999999999999994 5789999999999987765555
Q ss_pred cccccccccccCcccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 288 WTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 288 ~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
..+..||..|||||++..++ |..++|||||||++.||.||++||-.+........... +. .+.|.+ +.+
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG--my-KvHP~i------Pee 803 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG--MY-KVHPPI------PEE 803 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc--ce-ecCCCC------cHH
Confidence 66788999999999998664 88999999999999999999999876554222111100 00 011222 245
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 366 KLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
...+...+|.+|+.+||.+||+++++++
T Consensus 804 lsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 804 LSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 5667889999999999999999999985
No 302
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-40 Score=299.88 Aligned_cols=254 Identities=25% Similarity=0.414 Sum_probs=203.0
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 202 (397)
...|++.+.||+||.+.||++...+.+.+|+|++.... .+.....-|.+|+..|.+++ |.+|+++++|-..++.+|+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~--~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE--ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh--cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 35688889999999999999998888999999876422 23344678999999999994 9999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|||| ...+|..+|..... ....| .+..+..|++.|+.++|.. +|||.||||.|+|+ -.|.+||+|||.|..+.
T Consensus 438 vmE~-Gd~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 438 VMEC-GDIDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDFGIANAIQ 510 (677)
T ss_pred Eeec-ccccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeeechhcccC
Confidence 9996 46699999987653 22334 7788899999999999999 99999999999998 46789999999999877
Q ss_pred CCCCC--cccccccccccCcccccCC-----------CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccc
Q 016009 283 PDSSN--WTEFAGTYGYVAPELAYTM-----------KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELD 349 (397)
Q Consensus 283 ~~~~~--~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 349 (397)
.+... ....+||..||+||.+... +.+.+|||||+||+||+|+.|+.||+.... ....+.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~aKl~ 583 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIAKLH 583 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHHHHH
Confidence 65433 3457899999999987643 256799999999999999999999875432 233456
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 350 EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+.||.-..+.....+ ..++.++++.||+.||++|||+.++|++
T Consensus 584 aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 6666643211111111 1228899999999999999999999874
No 303
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.7e-40 Score=304.67 Aligned_cols=194 Identities=24% Similarity=0.386 Sum_probs=168.3
Q ss_pred CCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-C-----CceeeeEEEEecCC
Q 016009 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-H-----RNIVKLYGFCSHAR 198 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~ 198 (397)
+|++.+.||+|+||.|.+| +.++++.||||+++... .-..+-..|+.+|..|+ | -|+|++++++...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 7888999999999999999 56689999999998632 23466778999999996 4 48999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC--CcEEEeeec
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE--FEAHVADFG 276 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg 276 (397)
+.+||+|.+ ..+|.+++..+.. ..++...++.++.||+.||.+||+. +|||+||||+||||.+- ..+||+|||
T Consensus 262 HlciVfELL-~~NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 262 HLCIVFELL-STNLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred ceeeeehhh-hhhHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecc
Confidence 999999988 4599999988765 4599999999999999999999998 99999999999999654 379999999
Q ss_pred cccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 016009 277 IAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 332 (397)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~ 332 (397)
.+++...... ...-+..|.|||++.+.+|+.+.|+|||||++.||++|.+-|.
T Consensus 337 SSc~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 337 SSCFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred cccccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 9987543322 3456778999999999999999999999999999999976654
No 304
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.3e-39 Score=294.99 Aligned_cols=264 Identities=21% Similarity=0.278 Sum_probs=195.3
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCe---
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARH--- 199 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~--- 199 (397)
++|+..+.||+|+||.||+|... +++.||+|.+...... ......+.+|+.+++.++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE--EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc--cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 36888899999999999999754 7899999987653221 122457888999999995 6999999999876655
Q ss_pred --eeEEEEeccCCCHHHhhccccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC-CCcEEEee
Q 016009 200 --SFLVYEFLKRGSLAAILSSDAA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL-EFEAHVAD 274 (397)
Q Consensus 200 --~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~D 274 (397)
.++||||+++ +|.+++..... ...+++..++.++.||+.||.|||+. +++|+||+|+||+++. ++.++|+|
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 8999999986 78888764332 24689999999999999999999998 9999999999999998 88999999
Q ss_pred eccccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc-------cccc
Q 016009 275 FGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL-------NTDI 346 (397)
Q Consensus 275 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~-------~~~~ 346 (397)
||++..............+++.|+|||.+.+ ..++.++||||||+++|+|++|..||........... ....
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T cd07837 155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ 234 (295)
T ss_pred cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 9998765433222233456888999998765 4578999999999999999999999864322110000 0000
Q ss_pred ccccc---c----CCCCCC--CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEM---L----DPRLPA--PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~---~----~~~~~~--~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..... . .+.... ...........+.+++.+||+.||++|||+.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 0 000000 000011234568899999999999999999999864
No 305
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.8e-39 Score=294.94 Aligned_cols=244 Identities=26% Similarity=0.414 Sum_probs=195.2
Q ss_pred ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccC
Q 016009 131 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 209 (397)
..||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++|+|++++++++...+..++||||+++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 5699999999999966 478999999875321 22356789999999999999999999999999999999999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcc
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 289 (397)
++|.+++... .+++.....++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++...........
T Consensus 102 ~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 102 GALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 9999987532 478999999999999999999998 999999999999999999999999999876544333333
Q ss_pred cccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 016009 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRS 369 (397)
Q Consensus 290 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
...++..|+|||...+..++.++|+||+|+++|+|++|..||......... ........+.... .......
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~ 245 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-----KMIRDNLPPKLKN----LHKVSPS 245 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHhhCCcccCC----cccCCHH
Confidence 456889999999998888899999999999999999999997632211000 0001111111111 1122345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 370 IVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 370 l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+.+++.+||+.+|.+||++.+++++
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhcC
Confidence 7889999999999999999999863
No 306
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.4e-39 Score=290.51 Aligned_cols=253 Identities=27% Similarity=0.444 Sum_probs=194.7
Q ss_pred CCCCccccccCcEEEEEEEeC----CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC----
Q 016009 127 FDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR---- 198 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 198 (397)
|.+.+.||+|+||.||+|... +++.||+|.+...... ....+++.+|++++++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS--SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC--hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 456778999999999999643 4688999998653322 223567899999999999999999999885432
Q ss_pred --eeeEEEEeccCCCHHHhhcccc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEe
Q 016009 199 --HSFLVYEFLKRGSLAAILSSDA---AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVA 273 (397)
Q Consensus 199 --~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 273 (397)
..++++||+++|+|.+++.... ....+++...+.++.|++.||+|||+. +++|+||||+||+++.++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEEC
Confidence 2478899999999998875322 112478999999999999999999998 99999999999999999999999
Q ss_pred eeccccccCCCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccccccccccc
Q 016009 274 DFGIAKFLKPDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDE 350 (397)
Q Consensus 274 Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 350 (397)
|||++........ ......++..|++||......++.++||||||+++|||++ |+.||....... ....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--------~~~~ 227 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--------IYNY 227 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--------HHHH
Confidence 9999886543221 1122345678999999988889999999999999999999 888876432210 0000
Q ss_pred ccC-CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 351 MLD-PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 351 ~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
+.. .....+. .....+.+++.+||+.+|++|||+.++++.|+
T Consensus 228 ~~~~~~~~~~~----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~ 270 (273)
T cd05074 228 LIKGNRLKQPP----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270 (273)
T ss_pred HHcCCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 100 0111111 23346899999999999999999999999985
No 307
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.8e-40 Score=292.58 Aligned_cols=251 Identities=27% Similarity=0.354 Sum_probs=201.4
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|...+.||.|+||.||++... +++.|++|.+..... ......+.+.+|++++++++||||+++++++..+...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh-cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 4677889999999999999765 689999999864221 11123578899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+.+++|.+++... ..+++.++..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 80 DLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred eCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 999999999998654 3588999999999999999999998 9999999999999999999999999998865433
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
. ......++..|+|||...+..++.++|+||||+++|+|++|+.||........... ...........+ .
T Consensus 154 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~----~ 223 (258)
T cd05578 154 T-LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI-----RAKQETADVLYP----A 223 (258)
T ss_pred c-cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH-----HHHhccccccCc----c
Confidence 2 22345678899999999888899999999999999999999999875432100000 011110111111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH--HHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTM--KIVSQ 393 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~--~~vl~ 393 (397)
.....+.+++.+||+.||.+||++ +|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 233568899999999999999999 77764
No 308
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=8.8e-39 Score=293.99 Aligned_cols=248 Identities=29% Similarity=0.428 Sum_probs=194.9
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|+||.||++.. .++..+|+|.+...... .......+.+|++++++++|||++++++++..++..++|||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 66678899999999999975 46889999998643222 22234678899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++ +|.+.+.... ..+++.++..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 106 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 9975 7777775433 3589999999999999999999998 9999999999999999999999999988754322
Q ss_pred CCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 286 SNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
....++..|+|||.+. .+.++.++||||||+++|||++|+.||....... ....+.....+. ..
T Consensus 179 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~--~~ 245 (317)
T cd06635 179 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNESPT--LQ 245 (317)
T ss_pred ---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHhccCCC--CC
Confidence 2346788999999874 4568899999999999999999999975432111 011111111110 01
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
.......+.+++.+||+.+|++||++.++++++
T Consensus 246 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 246 SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred CccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 113344588999999999999999999999864
No 309
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4e-39 Score=290.82 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=186.4
Q ss_pred cccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHh---ccCCceeeeEEEEecCCeeeEEEEec
Q 016009 132 CIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTE---IRHRNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~---l~h~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
.||+|+||.||++.. .+++.+|+|.+........ .....+.+|..+++. .+|||++.+.+++...+..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccc-hHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 389999999999965 4689999998865322211 112334445444443 47999999999999999999999999
Q ss_pred cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC
Q 016009 208 KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287 (397)
Q Consensus 208 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 287 (397)
++|+|.+++.... .+++.++..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 80 ~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 80 NGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999999886543 589999999999999999999998 99999999999999999999999999987543222
Q ss_pred cccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHH
Q 016009 288 WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366 (397)
Q Consensus 288 ~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
.....|+..|+|||...+ ..++.++||||+|+++|||++|..||......... ....... ..........
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~------~~~~~~~---~~~~~~~~~~ 222 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH------EIDRMTL---TVNVELPDSF 222 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH------HHHHHhh---cCCcCCcccc
Confidence 223468999999998864 55889999999999999999999998643221100 0111100 0001111223
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 367 LRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 367 ~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
...+.+++.+||+.||++|| |+++++++
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 45688999999999999999 69999875
No 310
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9.6e-39 Score=284.90 Aligned_cols=251 Identities=27% Similarity=0.392 Sum_probs=203.9
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--CeeeE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHSFL 202 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 202 (397)
+|...+.||+|++|.||+|... +++.|++|++...... ....+.+.+|++++++++|||++++++.+... +..++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEE
Confidence 3667788999999999999765 7899999998753322 23467889999999999999999999999888 89999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
++||+++++|.+++.... .+++.+++.++.++++||+|||+. +++|+||+|+||+++.++.++|+|||.+....
T Consensus 79 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999999987644 689999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCC--CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccC-CCCCCC
Q 016009 283 PDSS--NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD-PRLPAP 359 (397)
Q Consensus 283 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 359 (397)
.... ......++..|+|||...+...+.++||||||+++++|++|..||........ ....... ....
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~-- 223 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA-------ALYKIGSSGEPP-- 223 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-------HHHhccccCCCc--
Confidence 4432 13345688899999999888899999999999999999999999875431100 0011111 0111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.........+.+++.+|++.+|++||++.++++.
T Consensus 224 -~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 224 -EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred -CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 0111224568899999999999999999999874
No 311
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.2e-39 Score=294.12 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=193.2
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 203 (397)
+|...+.||+|+||.||++.. .+++.+|+|.+...... .....+.+|+.++.++. |+||+++++++..++..+++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 455567899999999999965 46899999998643222 33567899999999996 99999999999999999999
Q ss_pred EEeccCCCHHHhhcc--ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 204 YEFLKRGSLAAILSS--DAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
|||+.. ++.++... ......+++..+..++.+++.||+|||+.. +++||||||+||+++.++.++|+|||++...
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 999864 55544321 111246899999999999999999999742 8999999999999999999999999998765
Q ss_pred CCCCCCcccccccccccCcccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccC---CC
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTM---KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD---PR 355 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 355 (397)
..... .....++..|+|||.+.+. .++.++||||||+++|||++|+.||....... ........ +.
T Consensus 159 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~ 230 (288)
T cd06616 159 VDSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF-------DQLTQVVKGDPPI 230 (288)
T ss_pred ccCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH-------HHHhhhcCCCCCc
Confidence 43222 1234678899999998766 68999999999999999999999986432110 00111111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+. ..........+.+++.+||+.+|++|||+++|++.
T Consensus 231 ~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 231 LS--NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CC--CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 11112345568999999999999999999999874
No 312
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.6e-39 Score=286.48 Aligned_cols=243 Identities=27% Similarity=0.364 Sum_probs=195.4
Q ss_pred ccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||.|++|.||++... +++.+++|.+...... .....+.+.+|+++++.++||||+++++++.+++..++++||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 689999999999765 5899999998653221 12235679999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccc
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 291 (397)
|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 80 L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~ 152 (262)
T cd05572 80 LWTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTF 152 (262)
T ss_pred HHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccc
Confidence 999997543 488999999999999999999998 99999999999999999999999999998765432 22334
Q ss_pred cccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccC--CCCCCCCcchHHHHHH
Q 016009 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAPSRSVQEKLRS 369 (397)
Q Consensus 292 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 369 (397)
.++..|+|||.+.+..++.++|+||+|+++|+|++|..||....... ......+.+ .....+. .....
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~----~~~~~ 222 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP------MEIYNDILKGNGKLEFPN----YIDKA 222 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH------HHHHHHHhccCCCCCCCc----ccCHH
Confidence 67889999999988889999999999999999999999986443100 001111111 1111111 11456
Q ss_pred HHHHHHHccCCCCCCCCC-----HHHHHH
Q 016009 370 IVEVVFSCLNESPESRPT-----MKIVSQ 393 (397)
Q Consensus 370 l~~l~~~cl~~~P~~RPt-----~~~vl~ 393 (397)
+.+++.+||+.+|++||+ ++|+++
T Consensus 223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 223 AKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 899999999999999999 888876
No 313
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-40 Score=306.74 Aligned_cols=247 Identities=22% Similarity=0.373 Sum_probs=192.7
Q ss_pred CccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe--eeEEEEe
Q 016009 130 QYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH--SFLVYEF 206 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 206 (397)
..+||+|+|-+||+|.. .+|..||--.++...........+.|..|+.+|+.|+||||++++.++.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 45699999999999954 46777775544432223334446889999999999999999999999976654 7799999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-CcEEEeeeccccccCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~~~ 285 (397)
+..|+|..++...+ ..+...+..|+.||++||.|||++ .|+|+|||||.+||+++.+ |.+||+|+|+|.......
T Consensus 125 ~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 99999999997765 488899999999999999999996 4699999999999999765 899999999999876544
Q ss_pred CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 286 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
.. ...|||.|||||+.. ..|++..||||||++++||+|+..||..-.....-+ ..+-....+ .....-
T Consensus 201 ak--svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIY--------KKV~SGiKP-~sl~kV 268 (632)
T KOG0584|consen 201 AK--SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIY--------KKVTSGIKP-AALSKV 268 (632)
T ss_pred cc--eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHH--------HHHHcCCCH-HHhhcc
Confidence 33 378999999999887 689999999999999999999999986433211100 000000000 000000
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 366 KLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.-.++.++|.+|+.. .++|||+.|+|+
T Consensus 269 ~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 269 KDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 013488999999999 999999999986
No 314
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=303.13 Aligned_cols=244 Identities=27% Similarity=0.454 Sum_probs=199.7
Q ss_pred CccccccCcEEEEEEEeC--CCC--EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 130 QYCIGNGGHGSVYRAELP--SGQ--VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
.++||+|.||.|++|.+. +|+ .||||.++...... ...+|++|+.+|.+|+|||+++++|+..+ ....+|+|
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~---~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA---IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch---hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 467999999999999664 454 68999998643322 46899999999999999999999999987 67889999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
.++.|||.+.|+. .....|-......++.|||.||+||.++ ++|||||..+|+++-..-.+||+|||+.+-+....
T Consensus 191 LaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999999987 3334577788899999999999999999 99999999999999999999999999999877554
Q ss_pred CCcc---cccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccccC--CCCCCC
Q 016009 286 SNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEMLD--PRLPAP 359 (397)
Q Consensus 286 ~~~~---~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 359 (397)
.... ...-...|.|||.+....++.+||||+|||++|||+| |..||-...... +-+.+| ++++.+
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q---------IL~~iD~~erLpRP 337 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ---------ILKNIDAGERLPRP 337 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH---------HHHhccccccCCCC
Confidence 4331 1223568999999999999999999999999999999 788875433211 111122 234444
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. .+.+.+++++..||..+|++|||+..|.+.
T Consensus 338 k----~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 338 K----YCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred C----CChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 3 455679999999999999999999999744
No 315
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.3e-39 Score=295.90 Aligned_cols=263 Identities=28% Similarity=0.336 Sum_probs=196.2
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--Cee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHS 200 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 200 (397)
.++|+..+.||+|+||.||+|... +|+.||+|.+....... .....+.+|+.++++++|+|++++++++... +..
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD--GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC--CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 457888999999999999999654 68999999986432211 1123466899999999999999999998654 568
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+.+ +|.+++.... ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++..
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EEEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeee
Confidence 999999975 8888876533 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-----cc-cc-ccc---cc
Q 016009 281 LKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-----FL-NT-DIE---LD 349 (397)
Q Consensus 281 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-----~~-~~-~~~---~~ 349 (397)
............++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......... .. .. ... ..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 6544333333455788999998865 45789999999999999999999998643321100 00 00 000 00
Q ss_pred ccc---CCCCC-CCCcch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 350 EML---DPRLP-APSRSV----QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 350 ~~~---~~~~~-~~~~~~----~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..- ..... .+.... ......+.+++.+|++.||++|||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 00000 000000 1124567889999999999999999999864
No 316
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.1e-39 Score=291.63 Aligned_cols=263 Identities=23% Similarity=0.326 Sum_probs=195.1
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|+..+.||+|++|.||+|... +|+.|++|.+...... ....+.+.+|++++++++|||++++++++......++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED--EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc--ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 46888899999999999999764 7899999998643221 12346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC-CCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~ 282 (397)
|||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++. ++.+||+|||++....
T Consensus 80 ~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred Eeccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 99996 578777754332 3467888999999999999999998 9999999999999985 5679999999997654
Q ss_pred CCCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc------c-ccc------cc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL------N-TDI------EL 348 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~------~-~~~------~~ 348 (397)
..........+++.|+|||.+.+. .++.++||||+|+++|+|+||+.||........... . ... .+
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 155 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred CCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence 333333344678899999988664 578999999999999999999999864322100000 0 000 00
Q ss_pred cccc--CCCCCCCC--cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 DEML--DPRLPAPS--RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 ~~~~--~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.... .+...... .........+.+++.+|++.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00000000 0001123458899999999999999999999864
No 317
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.6e-39 Score=287.57 Aligned_cols=245 Identities=24% Similarity=0.288 Sum_probs=185.8
Q ss_pred ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHH-HhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEAL-TEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
+.||+|+||.||+|.. .+|+.||+|.+...... .......+..|..++ ...+|+|++++++++...+..++|+||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI-AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh-HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 4589999999999965 46899999998642111 111123345555544 44589999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++..... .
T Consensus 81 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~ 150 (260)
T cd05611 81 GGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----N 150 (260)
T ss_pred CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----c
Confidence 999999986543 488999999999999999999998 999999999999999999999999998875432 2
Q ss_pred ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH
Q 016009 289 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR 368 (397)
Q Consensus 289 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
....++..|+|||...+..++.++||||||+++|||++|..||........ ...+.......+.........
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV--------FDNILSRRINWPEEVKEFCSP 222 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH--------HHHHHhcccCCCCcccccCCH
Confidence 234678899999999888889999999999999999999999864322110 011111111101111112345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 369 SIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 369 ~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+.+++.+||+.+|++||++.++.+.
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHH
Confidence 68899999999999999977544443
No 318
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4e-40 Score=275.03 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=198.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 203 (397)
+......||+|..|.|++++.. +|...|||.+..... ..+.+.++..++++...+ +|+||+.+|||..+...++.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N---kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC---HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 4445667999999999999654 689999999976433 334677888888877774 99999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||.|. ..++.++.... +++++.-+-++...+..||.||..++ +|+|||+||+|||+|+.|++|++|||.+..+..
T Consensus 170 MelMs-~C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 170 MELMS-TCAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHH-HHHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec
Confidence 99884 46777775544 46888888899999999999999985 999999999999999999999999999987764
Q ss_pred CCCCcccccccccccCcccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 284 DSSNWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
+. ..+..+|.+.|||||.+.- ..|+.++||||||+.++||.||+.||..-..- -+.+..+++...+...
T Consensus 245 Sk-AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-------Fe~ltkvln~ePP~L~ 316 (391)
T KOG0983|consen 245 SK-AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-------FEVLTKVLNEEPPLLP 316 (391)
T ss_pred cc-ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-------HHHHHHHHhcCCCCCC
Confidence 33 3355689999999998863 46889999999999999999999998642210 1112233332222111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+..+.+++..||++|+.+||...+++++
T Consensus 317 -~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 317 -GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred -cccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 111255679999999999999999999999874
No 319
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=9.1e-39 Score=284.41 Aligned_cols=249 Identities=27% Similarity=0.415 Sum_probs=202.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||++... +++.|++|.+...... ....+.+.+|++++++++|+|++++++++.+.+..+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEE
Confidence 4677889999999999999654 6889999998764322 234578999999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 79 EYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred ecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 999999999998654 3589999999999999999999998 9999999999999999999999999999876654
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
........++..|+|||...+..++.++||||+|+++++|++|+.|+............ .....+..+ .
T Consensus 153 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~--~---- 221 (254)
T cd06627 153 SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI-----VQDDHPPLP--E---- 221 (254)
T ss_pred cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH-----hccCCCCCC--C----
Confidence 44334456888999999988878899999999999999999999998643321110000 000011111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.....+.+++.+||+.+|++|||+.+++.
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 12345889999999999999999999985
No 320
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.2e-38 Score=284.07 Aligned_cols=253 Identities=25% Similarity=0.388 Sum_probs=204.1
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|...+.||+|++|.||++... +++.+++|++..... .....+.+..|+++++.++|||++++.+.+......++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence 4677788999999999999654 689999999865322 2234677899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 205 EFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||+++++|.+++.... ....+++.++..++.+++.||.|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 9999999999987642 124689999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
.........+++.|+|||...+..++.++|+||+|+++++|++|+.||+...... ...............
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 225 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE--------LALKILKGQYPPIPS-- 225 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH--------HHHHHhcCCCCCCCC--
Confidence 4323344568889999999988889999999999999999999999986433111 001111111111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+.+++.+||+.+|++|||+.++++.
T Consensus 226 -~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 226 -QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 223458899999999999999999999864
No 321
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.6e-39 Score=285.72 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=202.7
Q ss_pred CCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|+..+.||+|++|.||++.. .+++.+++|.+...... ......+.+|++++++++|+||+++.+++......++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS--QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc--HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence 467788899999999999954 47889999998643221 233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 205 EFLKRGSLAAILSSDAA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
||+++++|.+++..... ...+++..++.++.+++.||+|||+. +++|+||+|+||++++++.+||+|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 99999999999865321 24589999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 284 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 284 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
. ......++..|+|||...+..++.++|+||||+++|||++|+.||........ ...+.....+.. .
T Consensus 156 ~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~---~ 222 (256)
T cd08530 156 N--MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL--------RYKVQRGKYPPI---P 222 (256)
T ss_pred C--CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHhcCCCCCC---c
Confidence 4 22234678899999999988899999999999999999999999864332110 011111111111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.+++.+|++.+|++|||+.++++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 2344568999999999999999999999875
No 322
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=293.69 Aligned_cols=251 Identities=23% Similarity=0.280 Sum_probs=202.5
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.+.|+.-++||+|+||.||-+.. .+|+.+|.|++.+..- .........++|-.+|.+++.+.||.+--.|++++.+++
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi-Kkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRI-KKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHH-HHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 35688889999999999999954 5799999999864221 112234557889999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|+..|.||+|.-++.+.+. ..++++.++.++.+|+.||++||+. +||.|||||+|||+|+.|+++|+|+|+|..+.
T Consensus 263 VLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999987664 4599999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.... ....+||.+|||||++.++.|+...|.||+||++|||+.|+.||.....-.. .+.++..+ +..+...
T Consensus 339 ~g~~-~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk-----~eEvdrr~---~~~~~ey 409 (591)
T KOG0986|consen 339 EGKP-IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK-----REEVDRRT---LEDPEEY 409 (591)
T ss_pred CCCc-cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh-----HHHHHHHH---hcchhhc
Confidence 5433 3445999999999999999999999999999999999999999864332111 11111111 1112222
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTM 388 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~ 388 (397)
....+.+..++....|++||++|.-.
T Consensus 410 ~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 410 SDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred ccccCHHHHHHHHHHHccCHHHhccC
Confidence 23445567777889999999999643
No 323
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4.1e-39 Score=288.44 Aligned_cols=246 Identities=26% Similarity=0.367 Sum_probs=193.8
Q ss_pred ccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||.|+||.||++... +|+.+++|.+..... ......+.+.+|++++++++|||++++++.+..+...+++|||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh-hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999776 599999999865322 112345678999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC-----
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS----- 286 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~----- 286 (397)
|.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 80 L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 80 LASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 999987543 589999999999999999999998 999999999999999999999999999876443311
Q ss_pred ---CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcch
Q 016009 287 ---NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSV 363 (397)
Q Consensus 287 ---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (397)
......++..|+|||.......+.++||||||+++||+++|+.||....... ....+.......+...
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~- 224 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE--------IFQNILNGKIEWPEDV- 224 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCcCCCccc-
Confidence 2233467889999999988889999999999999999999999986433210 0111111111111110
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 364 QEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 364 ~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
.....+.+++.+||+.+|++|||+..+.+.|
T Consensus 225 -~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 -EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred -cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 1245688999999999999999994444433
No 324
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.3e-38 Score=295.59 Aligned_cols=260 Identities=23% Similarity=0.362 Sum_probs=195.5
Q ss_pred HhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC----
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA---- 197 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---- 197 (397)
..++|+..+.||+|+||.||++.. .+|+.||+|.+...... ......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN--VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC--hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 456899999999999999999965 47899999998643221 22345678899999999999999999988543
Q ss_pred --CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 198 --RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 198 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
...++||||+.+ +|.+.+.. .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+||
T Consensus 92 ~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 92 EFQDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred ccCcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 356999999964 88877743 278899999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc-------------c--
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS-------------S-- 340 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~-------------~-- 340 (397)
|++........ .....++..|+|||.+.+..++.++||||||+++|+|++|+.||........ .
T Consensus 163 g~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 163 GLARTAGTSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred ccceeCCCCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99986543222 2334678899999999999999999999999999999999999864321100 0
Q ss_pred ---------cccc-----ccccccccCCCC-CCC-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 341 ---------FLNT-----DIELDEMLDPRL-PAP-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 341 ---------~~~~-----~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+... ............ +.. ..........+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 000000000000 000 00011234567899999999999999999999864
No 325
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.4e-39 Score=290.23 Aligned_cols=255 Identities=24% Similarity=0.313 Sum_probs=196.0
Q ss_pred CCCCCccccccCcEEEEEEEe----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCee
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 200 (397)
+|+..+.||+|+||.||++.. .+|..||+|.+............+.+..|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 366778899999999999965 378999999986532222222346788999999999 699999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999986543 588999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCC-CcccccccccccCcccccCC--CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 281 LKPDSS-NWTEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 281 ~~~~~~-~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
...... ......++..|+|||...+. .++.++||||||+++|+|++|+.||......... ......+.....+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~----~~~~~~~~~~~~~ 230 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ----AEISRRILKSEPP 230 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH----HHHHHHhhccCCC
Confidence 543221 22234688899999998753 4678999999999999999999998632211000 0001111111111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
.+ ......+.+++.+||+.||++|| ++++++.+
T Consensus 231 ~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 231 YP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 11 12334578999999999999997 77777653
No 326
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.4e-38 Score=283.53 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=197.6
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCC-CcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--Cee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLP-SDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHS 200 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 200 (397)
.+|...+.||+|+||.||+|.. .+++.|++|.+..... .........+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688889999999999999965 4689999998753221 11223456788999999999999999999998654 467
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++++||+++++|.+++.... .+++.....++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999986543 478999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCC---CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 281 LKPDS---SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 281 ~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
..... .......++..|+|||.+.+..++.++|+||||+++|||++|+.||....... ...........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~ 227 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--------AIFKIATQPTK 227 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--------HHHHHHcCCCC
Confidence 53211 11223467889999999998889999999999999999999999986432211 01111100000
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+......+.+++.+||+ +|..|||..+++.+
T Consensus 228 --~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 228 --PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred --CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 11112334568899999999 57999999998865
No 327
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=288.81 Aligned_cols=260 Identities=19% Similarity=0.230 Sum_probs=182.9
Q ss_pred cCCCCCccccccCcEEEEEEEeCC----CCEEEEEecCCCCCCcchh-------cHHHHHHHHHHHHhccCCceeeeEEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIV-------DKKEFLTEVEALTEIRHRNIVKLYGF 193 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~ 193 (397)
++|.+.+.||+|+||.||+|...+ +..+++|............ .......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578889999999999999997654 3456666533211110000 00112233445566789999999997
Q ss_pred EecCC----eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc
Q 016009 194 CSHAR----HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE 269 (397)
Q Consensus 194 ~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 269 (397)
+.... ..++++|++.. ++.+.+... ...++..+..++.|++.||+|||+. +++||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 75443 34677777643 666665432 2357888999999999999999998 9999999999999999999
Q ss_pred EEEeeeccccccCCCCC-------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc
Q 016009 270 AHVADFGIAKFLKPDSS-------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342 (397)
Q Consensus 270 ~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~ 342 (397)
++|+|||+++.+..... ......||+.|+|||...+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999986643221 11234689999999999999999999999999999999999999975422110000
Q ss_pred c-cccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 343 N-TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 343 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
. .......+..+.... ......+.+++..|++.+|++||+++++++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKI-----KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHHhhhhhhcc-----CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0 000111111111111 122355889999999999999999999998874
No 328
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-38 Score=293.46 Aligned_cols=264 Identities=21% Similarity=0.289 Sum_probs=193.8
Q ss_pred CCCCCccccccCcEEEEEEEeC---CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--Cee
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP---SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHS 200 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 200 (397)
.|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+.+|+.++++++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE-QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc-cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence 3667788999999999999764 478999999875321 1112235678899999999999999999999888 889
Q ss_pred eEEEEeccCCCHHHhhccccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC----CCcEEEee
Q 016009 201 FLVYEFLKRGSLAAILSSDAA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL----EFEAHVAD 274 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~----~~~~kl~D 274 (397)
++||||+++ +|.+++..... ...+++..++.++.|++.||+|||+. +++|+||||+||+++. ++.+||+|
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECC
Confidence 999999975 66666643221 13688999999999999999999998 9999999999999999 89999999
Q ss_pred eccccccCCCCC---CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc-cccccc-
Q 016009 275 FGIAKFLKPDSS---NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL-NTDIEL- 348 (397)
Q Consensus 275 fg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~- 348 (397)
||++........ ......++..|+|||.+.+. .++.++||||||++++||++|+.||........... .....+
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999986543322 12234678899999987664 578999999999999999999999864332110000 000000
Q ss_pred -----------------------ccc--cCCCCCCCCcchH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 -----------------------DEM--LDPRLPAPSRSVQ-------EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 -----------------------~~~--~~~~~~~~~~~~~-------~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
... .......+..... .....+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 0000000000111 123458899999999999999999999864
No 329
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.4e-38 Score=286.35 Aligned_cols=257 Identities=22% Similarity=0.300 Sum_probs=191.1
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecC--CeeeE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHA--RHSFL 202 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~l 202 (397)
|+..+.||+|+||.||+|.. .+++.||+|.++...... .......|+.+++++. |+|++++++++.+. +..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL---EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc---hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 45677899999999999965 478999999987532221 1234457899999985 99999999999887 88999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||++ ++|.+.+.... ..+++.+++.++.|++.||+|||+. +++|+||+|+||+++. +.+||+|||++....
T Consensus 78 v~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 78 VFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred EEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 999997 57877776533 3589999999999999999999998 9999999999999999 999999999998664
Q ss_pred CCCCCcccccccccccCccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc-----ccccc-cc------ccc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS-----SFLNT-DI------ELD 349 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~-----~~~~~-~~------~~~ 349 (397)
.... .....++..|+|||... +..++.++|||||||++|||++|..||........ ..... .. ...
T Consensus 151 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 151 SKPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred cCCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccc
Confidence 3322 22345788999999764 45578899999999999999999999864332110 00000 00 000
Q ss_pred cccCCCCCCC-C----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 350 EMLDPRLPAP-S----RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 350 ~~~~~~~~~~-~----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+...+.. . ......+..+.+++.+||+.+|++|||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000000 0 0011235679999999999999999999999864
No 330
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.9e-38 Score=287.07 Aligned_cols=260 Identities=25% Similarity=0.331 Sum_probs=199.9
Q ss_pred CCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|++|.||++... +++.+++|.+...... ......+..|++++++++|+|++++++++..++..++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES--EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 456678999999999999664 7889999998753322 1235678899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++ +|.+++.... ..+++.++..++.+++.||.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 79 FMDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred ccCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 9975 8888876543 4689999999999999999999998 99999999999999999999999999998765443
Q ss_pred CCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccc-------cccccccccC----
Q 016009 286 SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN-------TDIELDEMLD---- 353 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~-------~~~~~~~~~~---- 353 (397)
.......++..|+|||.+.+. .++.++|+||+|+++|+|+||+.||............ .........+
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARN 232 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhh
Confidence 223334678889999998776 7899999999999999999999998643321100000 0000000000
Q ss_pred -------CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 354 -------PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 354 -------~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...........+....+.+++.+||+.||.+||++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000011122345679999999999999999999999864
No 331
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-39 Score=297.25 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=204.6
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
...|.+...||+|.|++|..+.. .++..||+|.+.+... +....+.+.+|+++|+.++|||||+++.+......+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l--n~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL--NPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc--ChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 45788889999999999999954 4799999999876332 23334568999999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+.+|.+.+++..+.. +.......++.|+..|++|||++ .|+|||||++||||+.+.++||+|||++.++.
T Consensus 133 V~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999987764 55588889999999999999999 99999999999999999999999999999887
Q ss_pred CCCCCcccccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
.. ....+.+|++.|.|||++.+.+| .+++|+||+|+++|-|+.|..||+...-.. -....+...+..+..
T Consensus 207 ~~-~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------Lr~rvl~gk~rIp~~ 277 (596)
T KOG0586|consen 207 YG-LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------LRPRVLRGKYRIPFY 277 (596)
T ss_pred cc-ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--------ccchheeeeecccce
Confidence 43 34456799999999999998876 578999999999999999999998422110 011111112222211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. ..+..+++++++..+|.+|++++++-+.
T Consensus 278 m----s~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 278 M----SCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred e----echhHHHHHHhhccCccccCCHHHhhhh
Confidence 1 1236688889999999999999998654
No 332
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=5.6e-39 Score=291.41 Aligned_cols=257 Identities=23% Similarity=0.311 Sum_probs=197.7
Q ss_pred CCCCCccccccCcEEEEEEEe----CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCee
Q 016009 126 DFDAQYCIGNGGHGSVYRAEL----PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 200 (397)
+|+..+.||+|++|.||++.. .+++.||+|.++...........+.+.+|++++.++ +|||++++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778899999999999864 357889999986432222223346788999999999 599999999999999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999998653 3588999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCC-cccccccccccCcccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 281 LKPDSSN-WTEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 281 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
....... .....++..|+|||...+.. .+.++||||||+++|||++|..||......... ......+.....+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~ 230 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ----SEISRRILKSKPP 230 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH----HHHHHHHHccCCC
Confidence 5433221 22345788999999987655 788999999999999999999998532211100 0001111111111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+. .....+.+++.+||+.||++|||+.++.+.|+
T Consensus 231 ~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 231 FPK----TMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 111 12345788999999999999999887766553
No 333
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.1e-38 Score=283.16 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=191.4
Q ss_pred HHHHHHhcCCCCCccc--cccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEE
Q 016009 118 DEIVRATNDFDAQYCI--GNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGF 193 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~l--g~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 193 (397)
.+.....++|++.+.+ |+|+||.||++.. .++..+|+|.+...... . .|+.....+ +|||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-------~--~e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-------A--IEPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-------h--hhHHHHHHhhcCCCEEEEEEE
Confidence 3444445677777766 9999999999965 47888999987642111 0 122222223 79999999999
Q ss_pred EecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC-cEEE
Q 016009 194 CSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF-EAHV 272 (397)
Q Consensus 194 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl 272 (397)
+...+..++||||+++++|.+++.... .+++.++..++.|+++||.|||+. +++|+||||+||+++.++ .++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEE
Confidence 999999999999999999999997543 689999999999999999999998 999999999999999998 9999
Q ss_pred eeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 016009 273 ADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML 352 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
+|||++...... ....++..|+|||++.+..++.++||||||+++|||++|+.||.......... .......
T Consensus 152 ~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~ 223 (267)
T PHA03390 152 CDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL----ESLLKRQ 223 (267)
T ss_pred ecCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH----HHHHHhh
Confidence 999998765432 22367889999999998889999999999999999999999986332211000 0011111
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 016009 353 DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT-MKIVSQQ 394 (397)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt-~~~vl~~ 394 (397)
..... ........+.+++.+||+.+|.+||+ +++++++
T Consensus 224 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 224 QKKLP----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cccCC----cccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 11111 11234456889999999999999996 6998863
No 334
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.4e-38 Score=290.02 Aligned_cols=254 Identities=24% Similarity=0.377 Sum_probs=193.5
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 201 (397)
.++|+..+.||+|++|.||+|... +++.||||.++..... .....+..|+.++.+.. ||||+++++++..+...+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK---EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh---HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 356788899999999999999876 4899999998653221 22456677887777774 999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
++|||+. +++.+++.... ..+++..+..++.+++.||+|||+. .+++|+||+|+||++++++.++|+|||++..+
T Consensus 91 ~v~e~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 91 ICMELMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EEeeccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 9999985 47777665432 3689999999999999999999973 18999999999999999999999999998765
Q ss_pred CCCCCCcccccccccccCcccccCCC----CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCC
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTMK----ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLP 357 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (397)
..... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... .....+.+...+
T Consensus 166 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~ 237 (296)
T cd06618 166 VDSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-------EVLTKILQEEPP 237 (296)
T ss_pred cCCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-------HHHHHHhcCCCC
Confidence 43222 22345788999999987553 7889999999999999999999986421100 001111111111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 358 APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 358 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.... ......++.+++.+||+.||++||++++++++
T Consensus 238 ~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 238 SLPP-NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCC-CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 01233468899999999999999999999875
No 335
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4e-38 Score=289.02 Aligned_cols=247 Identities=28% Similarity=0.414 Sum_probs=192.2
Q ss_pred CCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|...+.||+|+||+||+|.. .+++.|++|.+...... .......+.+|+++++.++|||++++++++.+....++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 55567799999999999965 46889999998643221 22234578899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 102 ~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 102 YCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred cCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 996 57777775433 3589999999999999999999998 999999999999999999999999998864322
Q ss_pred CCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 286 SNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.....++..|+|||.+. ...++.++||||||+++|||++|..|+............ .....+...
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~----- 241 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-----AQNDSPTLQ----- 241 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-----HhcCCCCCC-----
Confidence 22346788999999874 456888999999999999999999997643321100000 000001111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+.+++.+||+.+|++||++.++++.
T Consensus 242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11223458889999999999999999999864
No 336
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.3e-38 Score=284.26 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=194.6
Q ss_pred CCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc---cCCceeeeEEEEecCCe---
Q 016009 127 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI---RHRNIVKLYGFCSHARH--- 199 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~--- 199 (397)
|+..+.||+|+||.||+|..+ +++.+|+|.+....... .....+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE--GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc--hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 456788999999999999876 58999999987533221 1234566788877766 59999999999987766
Q ss_pred --eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 200 --SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 200 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
.+++|||+.+ +|.+++..... ..+++.+++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||+
T Consensus 79 ~~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 79 LKLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred ceeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCc
Confidence 8999999975 89888865432 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc--cc-----cccccc-c-
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--SF-----LNTDIE-L- 348 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--~~-----~~~~~~-~- 348 (397)
+........ .....++..|+|||.+.+..++.++|+||||+++|||++|+.||........ .. ...... .
T Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 154 ARIYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ceeccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCC
Confidence 877643322 2233578899999999988899999999999999999999999864332110 00 000000 0
Q ss_pred -----ccccCCCCCC-CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 -----DEMLDPRLPA-PSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 -----~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......... ......+....+.+++.+||+.||++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000000 011112334567899999999999999999999863
No 337
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.9e-38 Score=290.35 Aligned_cols=256 Identities=18% Similarity=0.238 Sum_probs=189.9
Q ss_pred cccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
.+|.|+++.+|++.. +++.||+|++..... .....+.+.+|+++++.++|+||+++++++...+..+++|||+++|+
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSC--SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEecccc--chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 345555555555544 789999999875321 22345789999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC-----
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS----- 286 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~----- 286 (397)
|.+++..... ..+++.....++.|++.||+|||+. +|+|+||||+||+++.++.++++|||.+........
T Consensus 86 l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999975432 3588999999999999999999998 999999999999999999999999998865432211
Q ss_pred --CcccccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc----------------ccccc
Q 016009 287 --NWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF----------------LNTDI 346 (397)
Q Consensus 287 --~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~----------------~~~~~ 346 (397)
......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||.......... .....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 1122356778999999875 358899999999999999999999987433211000 00000
Q ss_pred cccc----ccCCCC--CCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDE----MLDPRL--PAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~----~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.... ..++.. .............+.+++.+||+.||++|||+++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 000000 01111122334568899999999999999999999874
No 338
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.2e-38 Score=290.18 Aligned_cols=249 Identities=28% Similarity=0.427 Sum_probs=193.8
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
.|+..+.||+|+||.||+|... +++.+++|.+...... .....+++.+|+++++.++|+|++++.+++......++||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 4666788999999999999754 6788999988642111 1223457889999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+. |++.+.+.... ..+++.++..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9996 57877765433 3588999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 285 SSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
....++..|+|||.+. ...++.++||||||+++|||++|+.|+........ ...+.....+ ..
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~--~~ 234 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--------LYHIAQNESP--AL 234 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH--------HHHHhhcCCC--Cc
Confidence 2345788999999874 35678899999999999999999999754322110 0000000111 00
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
........+.+++.+||+.+|++||+++++++.-
T Consensus 235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0113345688999999999999999999998753
No 339
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.4e-38 Score=295.16 Aligned_cols=262 Identities=24% Similarity=0.361 Sum_probs=195.6
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecC--C
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHA--R 198 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~ 198 (397)
..++|+..+.||+|+||.||+|... +++.+|+|++...... ......+..|+.+++++ +||||+++++++... .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 3467888899999999999999765 6889999988642221 12245677899999999 999999999998643 4
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
..++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~ 154 (337)
T cd07852 83 DIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLA 154 (337)
T ss_pred eEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccch
Confidence 6899999997 5998888643 578999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCC-----CcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------cccc
Q 016009 279 KFLKPDSS-----NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------LNTD 345 (397)
Q Consensus 279 ~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------~~~~ 345 (397)
........ ......++..|+|||.+.+ ..++.++||||||+++|+|+||+.||.......... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 86543321 2233467889999998764 457889999999999999999999986432211000 0000
Q ss_pred c--------ccccccC----CCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 346 I--------ELDEMLD----PRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 346 ~--------~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. ....+.+ ................+.+++.+||+.||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 0000000 00000001111134568899999999999999999999864
No 340
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.6e-38 Score=286.72 Aligned_cols=260 Identities=25% Similarity=0.373 Sum_probs=196.1
Q ss_pred CCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC--CeeeEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA--RHSFLV 203 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 203 (397)
|+..+.||+|++|.||+|... +++.+++|++.... ........+.+|++++++++|+|++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 456778999999999999765 58899999987643 1122346788999999999999999999999887 889999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+||+++ +|.+++.... ..+++.+++.++.|+++||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 79 FEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred eccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 999975 8888886543 3589999999999999999999998 999999999999999999999999999987654
Q ss_pred CCC-CcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccc-----c---ccccc--ccccc-
Q 016009 284 DSS-NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS-----S---FLNTD--IELDE- 350 (397)
Q Consensus 284 ~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~-----~---~~~~~--~~~~~- 350 (397)
... ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||........ . ..... .....
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 321 2233456788999997764 4578999999999999999999999864332110 0 00000 00000
Q ss_pred ----ccCCCCCCCC---cchHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 351 ----MLDPRLPAPS---RSVQE-KLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 351 ----~~~~~~~~~~---~~~~~-~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+....+. ..... ....+.+++.+||+.+|++||+++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000000 00001 14568899999999999999999999864
No 341
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.6e-38 Score=288.99 Aligned_cols=265 Identities=24% Similarity=0.342 Sum_probs=196.7
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC--
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR-- 198 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 198 (397)
...++|++.+.||+|+||.||+|..+ +|+.||+|.++..... ......+.+|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc--cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence 45678999999999999999999765 6889999998653221 122456788999999999999999999987654
Q ss_pred --------eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcE
Q 016009 199 --------HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEA 270 (397)
Q Consensus 199 --------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 270 (397)
..++|+||+++ ++.+.+.... ..+++.+++.++.|++.||+|||+. +++|+||+|+||++++++.+
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcE
Confidence 78999999986 6767665432 3589999999999999999999998 99999999999999999999
Q ss_pred EEeeeccccccCCCCC-CcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-----c--
Q 016009 271 HVADFGIAKFLKPDSS-NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-----F-- 341 (397)
Q Consensus 271 kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-----~-- 341 (397)
||+|||++........ ......++..|+|||.+.+ ..++.++||||||++++||++|+.||......... .
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T cd07864 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG 235 (302)
T ss_pred EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999999987654332 1222345778999998764 35788999999999999999999998643321100 0
Q ss_pred cccccccccc--------cCCCCCC--C-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 342 LNTDIELDEM--------LDPRLPA--P-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 342 ~~~~~~~~~~--------~~~~~~~--~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.........+ .++.... . .......+..+.+++..||+.||++|||+++++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000000000 0000000 0 00001123568899999999999999999999864
No 342
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=6.4e-38 Score=287.46 Aligned_cols=263 Identities=24% Similarity=0.335 Sum_probs=192.1
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC----
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR---- 198 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 198 (397)
.++|+..+.||+|+||.||+|... +++.||+|.+....... .....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE--GFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC--CchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 347888999999999999999654 78999999886432211 12345678999999999999999999986654
Q ss_pred ----eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEee
Q 016009 199 ----HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVAD 274 (397)
Q Consensus 199 ----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 274 (397)
..++||||+.+ +|.+.+.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECc
Confidence 34999999964 7888775433 3589999999999999999999998 999999999999999999999999
Q ss_pred eccccccCCCCCC----cccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccc----------
Q 016009 275 FGIAKFLKPDSSN----WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISS---------- 339 (397)
Q Consensus 275 fg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~---------- 339 (397)
||++......... .....++..|+|||.+.+. .++.++||||||+++|||+||+.||........
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T cd07865 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGS 242 (310)
T ss_pred CCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999765432211 1234567889999987664 368899999999999999999999854321100
Q ss_pred ---cccccccccccccCCCCCCCC-cchH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 340 ---SFLNTDIELDEMLDPRLPAPS-RSVQ------EKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 340 ---~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
............-....+... .... .....+.+++.+||+.||++|||+++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000000000000000000000 0000 012356789999999999999999999864
No 343
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1e-38 Score=296.04 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=193.6
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC-----
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA----- 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 197 (397)
+++|+..+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|+.++++++||||+++++++...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH---QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 46889999999999999999964 5789999999863211 12346678899999999999999999987543
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...++++||+.+ +|.+.+.. +.+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 357999999975 88777743 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCC---cccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-------cccccc
Q 016009 278 AKFLKPDSSN---WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-------FLNTDI 346 (397)
Q Consensus 278 ~~~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-------~~~~~~ 346 (397)
+......... .....++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......... ......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 8765432211 123467889999998654 46889999999999999999999998543211000 000000
Q ss_pred ccccccCCC-------CCC-CCcc----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 ELDEMLDPR-------LPA-PSRS----VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~~~~~~~~~-------~~~-~~~~----~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....+.+.. .+. +... .......+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 011111000 000 0000 01123568899999999999999999999875
No 344
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-38 Score=309.19 Aligned_cols=268 Identities=18% Similarity=0.216 Sum_probs=186.4
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC--CCCEEEEEecCCC-------------CCCcchhcHHHHHHHHHHHHhccCCce
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP--SGQVVAIKKFHSP-------------LPSDQIVDKKEFLTEVEALTEIRHRNI 187 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~--~~~~vavK~~~~~-------------~~~~~~~~~~~~~~e~~~l~~l~h~ni 187 (397)
..++|++.+.||+|+||+||++..+ ++...+.|.+... ...........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3568999999999999999998643 2222222211100 000111224568899999999999999
Q ss_pred eeeEEEEecCCeeeEEEEeccCCCHHHhhccccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC
Q 016009 188 VKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAA--AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265 (397)
Q Consensus 188 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 265 (397)
+++++++...+..++|+|++. ++|.+++..... .......+...++.|++.||.|||+. +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 467666643321 12234667788999999999999998 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCC-CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCC-CCcccccccc---
Q 016009 266 LEFEAHVADFGIAKFLKPDSS-NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP-RDFLSSISSS--- 340 (397)
Q Consensus 266 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p-~~~~~~~~~~--- 340 (397)
.++.+||+|||++..+..... ......||..|+|||++.+..++.++|||||||++|||++|..+ +.........
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 999999999999987654322 22345789999999999999999999999999999999998754 4322111000
Q ss_pred ------------ccccccccccccC-CCCCCCCcchHH------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 341 ------------FLNTDIELDEMLD-PRLPAPSRSVQE------KLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 341 ------------~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+......+...++ ............ ....+.+++.+|++.||++|||+.|++++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000000000000 000000000001 12346778899999999999999999874
No 345
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.2e-38 Score=295.65 Aligned_cols=262 Identities=24% Similarity=0.353 Sum_probs=196.4
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC-----
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA----- 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 197 (397)
.++|...+.||+|+||+||++.. .+++.||+|.+...... ......+..|+.+++.++|+||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN--RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc--cchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence 45788889999999999999964 47899999998753221 22345677899999999999999999988543
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...++|+||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 82 NDVYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred CcEEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 35799999996 6888888653 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccc--------------cc-
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--------------SF- 341 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--------------~~- 341 (397)
+..............++..|+|||.+.. ..++.++||||||+++|+|++|+.||........ ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 155 ARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred ccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 9866543333334467889999998764 4688999999999999999999999864321100 00
Q ss_pred cccccccccccC--CCCCCC--CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 342 LNTDIELDEMLD--PRLPAP--SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 342 ~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
............ +..+.. ..........+.+++.+||+.+|++|||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000000000 000000 00011234568899999999999999999999875
No 346
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.2e-38 Score=289.33 Aligned_cols=255 Identities=23% Similarity=0.306 Sum_probs=190.6
Q ss_pred ccccc--CcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 132 CIGNG--GHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 132 ~lg~G--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
.||+| +||+||++.. .+|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++..++..++|+||+.
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 46666 8999999965 47999999998643222 2235678899999999999999999999999999999999999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNW 288 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 288 (397)
+++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999999876432 3588999999999999999999998 99999999999999999999999997654322111110
Q ss_pred -------ccccccccccCcccccCC--CCCcchhhHHHHHHHHHHHhCCCCCCcccccccc--cccc------c-----c
Q 016009 289 -------TEFAGTYGYVAPELAYTM--KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS--FLNT------D-----I 346 (397)
Q Consensus 289 -------~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~--~~~~------~-----~ 346 (397)
....++..|+|||++.+. .++.++||||||+++|||++|+.||......... .... . .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 112345679999998763 4789999999999999999999998643211000 0000 0 0
Q ss_pred c---------------cc---------cccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 E---------------LD---------EMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 ~---------------~~---------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. .. .+.+..+. ..........+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR--TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhhccchhhhhcccccchhcccccccccccccc--chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 00 00000010 11123455678999999999999999999999864
No 347
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.3e-38 Score=295.08 Aligned_cols=262 Identities=25% Similarity=0.371 Sum_probs=197.3
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec----CC
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH----AR 198 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~ 198 (397)
.++|+..+.||+|++|.||+|.. .+|+.||+|++...... ....+.+.+|+.++++++||||+++.+++.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV--PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc--ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCc
Confidence 36888889999999999999965 47999999998753221 2235677889999999999999999998753 35
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
..++||||+. ++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred eEEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccc
Confidence 6899999995 68988886543 489999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCCC----cccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-------------
Q 016009 279 KFLKPDSSN----WTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS------------- 340 (397)
Q Consensus 279 ~~~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~------------- 340 (397)
......... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 765432211 123467889999998765 45889999999999999999999998643321100
Q ss_pred ccc--cccccccccC---CCCCCC-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 341 FLN--TDIELDEMLD---PRLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 341 ~~~--~~~~~~~~~~---~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
... .........+ .....+ ..........+.+++.+||+.+|++|||+.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000 0000000000 000000 00011234668999999999999999999999875
No 348
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.8e-38 Score=283.18 Aligned_cols=245 Identities=19% Similarity=0.244 Sum_probs=186.5
Q ss_pred cccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHH---HHHhccCCceeeeEEEEecCCeeeEEEEec
Q 016009 132 CIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVE---ALTEIRHRNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
.||+|+||.||++.. .+++.||+|.+........ .....+..|.. .++...|||++.+.+++...+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc-hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 389999999999965 4688999999865322111 11222344443 344457999999999999999999999999
Q ss_pred cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC
Q 016009 208 KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN 287 (397)
Q Consensus 208 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 287 (397)
++|+|.+++... ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 80 NGGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 999999988643 3589999999999999999999998 99999999999999999999999999987553322
Q ss_pred cccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHH
Q 016009 288 WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366 (397)
Q Consensus 288 ~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
.....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||............ .........++ . ..
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~--~----~~ 222 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RMTLTMAVELP--D----SF 222 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH---HHhhccCCCCC--C----cC
Confidence 2334689999999998754 6899999999999999999999998654221110000 00000111111 1 12
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 016009 367 LRSIVEVVFSCLNESPESRP-----TMKIVSQQ 394 (397)
Q Consensus 367 ~~~l~~l~~~cl~~~P~~RP-----t~~~vl~~ 394 (397)
...+.+++.+|++.+|.+|| ++.+++++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 35688999999999999999 99999864
No 349
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.9e-38 Score=286.56 Aligned_cols=251 Identities=26% Similarity=0.383 Sum_probs=201.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 202 (397)
++|...+.||+|++|.||++... +|+.|++|++..... ......+.+..|.+++++++ ||||+++++++..++..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL-IKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc-cchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 36788889999999999999654 789999999865221 11223467889999999998 9999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+++++|.+++.... .+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 80 v~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 80 VLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999997643 599999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCC--------------------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc
Q 016009 283 PDSS--------------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL 342 (397)
Q Consensus 283 ~~~~--------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~ 342 (397)
.... ......++..|+|||...+..++.++|+||||++++++++|+.|+.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---- 229 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---- 229 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH----
Confidence 3221 1123456889999999988889999999999999999999999987443211
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCH----HHHHHH
Q 016009 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTM----KIVSQQ 394 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~----~~vl~~ 394 (397)
....+.+.....+. .....+.+++.+||+.+|++|||+ ++++++
T Consensus 230 ----~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 ----TFQKILKLEYSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred ----HHHHHHhcCCCCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 01111111111111 223458899999999999999999 888764
No 350
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=277.54 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=209.5
Q ss_pred HHHHHHhcCCCCCccccccCcEEEEEEEe------CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeE
Q 016009 118 DEIVRATNDFDAQYCIGNGGHGSVYRAEL------PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLY 191 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 191 (397)
.++.....+++..-++.+|.||.||+|.+ .+.+.|.+|.++..... .....++.|.-.+..+.|||+..+.
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~---iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQ---IQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccH---HHHHHHHHHHHHHhcCcCCCcccee
Confidence 34445556677777899999999999944 34567888888754332 2357789999999999999999999
Q ss_pred EEEec-CCeeeEEEEeccCCCHHHhhc-----cccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC
Q 016009 192 GFCSH-ARHSFLVYEFLKRGSLAAILS-----SDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265 (397)
Q Consensus 192 ~~~~~-~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 265 (397)
+++.. ....+.+|.++.-|+|..+|. +....+.++-.+...++.|++.|++|||+. ++||.||.++|.++|
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 99855 467789999999999999997 444456788889999999999999999999 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCCc--ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccc
Q 016009 266 LEFEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL 342 (397)
Q Consensus 266 ~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~ 342 (397)
+..++||+|=.+++.+-+.+.+. .....+..||+||.+....|+..+||||||++||||+| |+.|+....+.....+
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y 510 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY 510 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH
Confidence 99999999999998776554432 33456778999999999999999999999999999998 9999876655322111
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 343 NTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
..+ ..++..|. +++.+++.++.-||+.+|++||+++|++..|
T Consensus 511 lkd-------GyRlaQP~----NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 511 LKD-------GYRLAQPF----NCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred Hhc-------cceecCCC----CCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 111 12333343 3445699999999999999999999998876
No 351
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=9.7e-38 Score=282.55 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=195.0
Q ss_pred CCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 204 (397)
|.+.+.||+|++|+||+|... +++.|++|++...... .......+|+..+++++ |+|++++++++..++..++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence 456788999999999999765 5789999998653321 12334567999999998 999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
||+ +|+|.+.+.... ...+++.++..++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 78 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 78 EYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred ecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 999 889998886644 24589999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCCcccccccccccCccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------------ccccccccc
Q 016009 285 SSNWTEFAGTYGYVAPELAY-TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------------LNTDIELDE 350 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------------~~~~~~~~~ 350 (397)
.. .....++..|+|||.+. ...++.++|+||||++++||++|+.||.......... .........
T Consensus 153 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 153 PP-YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CC-cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 22 23346788999999875 4457899999999999999999999985433211000 000000000
Q ss_pred ccCCCCCCCC-c----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 351 MLDPRLPAPS-R----SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 351 ~~~~~~~~~~-~----~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+...+... . ........+.+++.+||+.||++|||++|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0111111000 0 000113568899999999999999999999864
No 352
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=270.56 Aligned_cols=262 Identities=20% Similarity=0.362 Sum_probs=211.7
Q ss_pred HHHHHHHhcCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEE
Q 016009 117 YDEIVRATNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFC 194 (397)
Q Consensus 117 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 194 (397)
|+|+-+.|+ +.||+|+++.|-.+ ...+|.++|||++.+. ....+..+.+|++++.+.+ |+||+.++++|
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq----~gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ----PGHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC----CchHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 567776664 45999999999988 5779999999998752 3456788999999999995 99999999999
Q ss_pred ecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC---cEE
Q 016009 195 SHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF---EAH 271 (397)
Q Consensus 195 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~k 271 (397)
+++...|||||-|.||+|..++.++. .+++.++.++..+|+.||.|||.+ +|.||||||+|||...-. -+|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 99999999999999999999998765 489999999999999999999999 999999999999996544 379
Q ss_pred EeeeccccccCCC-------CCCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccc
Q 016009 272 VADFGIAKFLKPD-------SSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS 339 (397)
Q Consensus 272 l~Dfg~~~~~~~~-------~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~ 339 (397)
|+||.+....... .....+.+|+..|||||+.. ...|+.++|.|||||++|-|++|.+||...-...-
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 9999887643221 11234568999999999753 23588999999999999999999999976554332
Q ss_pred cccccc-------cccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 340 SFLNTD-------IELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 340 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.|-.++ .-.+.+-+.....|...+...+.+..+++...+..|+.+|.++.+++.
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 222211 122334445555666667777788889999999999999999998876
No 353
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=311.26 Aligned_cols=260 Identities=27% Similarity=0.448 Sum_probs=204.9
Q ss_pred HHHHhcCCCCCccccccCcEEEEEEEeC--------CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeee
Q 016009 120 IVRATNDFDAQYCIGNGGHGSVYRAELP--------SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKL 190 (397)
Q Consensus 120 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~ 190 (397)
++...++..+.+.||+|.||.|++|... ....||||.++..... .+.+.+..|+++|+.+ +|+|++.+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~---~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS---SEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc---HHHHHHHHHHHHHHHhcCCcchhhh
Confidence 3444445556668999999999999642 1457999999864443 3578899999999999 79999999
Q ss_pred EEEEecCCeeeEEEEeccCCCHHHhhcccc------c-----c--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccC
Q 016009 191 YGFCSHARHSFLVYEFLKRGSLAAILSSDA------A-----A--QELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDI 257 (397)
Q Consensus 191 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------~-----~--~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl 257 (397)
+|+|..++..++|+||+..|+|.++++..+ . . ..++..+.+.++.|||.||+||++. +++||||
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDL 444 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDL 444 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhh
Confidence 999999999999999999999999998765 0 0 1388899999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEeeeccccccCCCCCCc-ccccc--cccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCc
Q 016009 258 SSKNLLLDLEFEAHVADFGIAKFLKPDSSNW-TEFAG--TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDF 333 (397)
Q Consensus 258 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~g--~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~ 333 (397)
.++|||++++..+||+|||+++......... ....+ ...|||||.+....|+.++||||||++||||+| |..|+..
T Consensus 445 AaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 445 AARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred hhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999998655443332 22222 456999999999999999999999999999999 8889764
Q ss_pred cccccccccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 334 LSSISSSFLNTDIELDEMLDP-RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
..... .....+.+. ++..|. .+..++.+++..||+.+|++||++.++.+.|+
T Consensus 525 ~~~~~-------~l~~~l~~G~r~~~P~----~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 525 IPPTE-------ELLEFLKEGNRMEQPE----HCSDEIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred CCcHH-------HHHHHHhcCCCCCCCC----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 22100 001111111 222222 33456899999999999999999999998875
No 354
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=8.9e-38 Score=289.67 Aligned_cols=262 Identities=24% Similarity=0.287 Sum_probs=192.4
Q ss_pred CCC-CCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchh----------cHHHHHHHHHHHHhccCCceeeeEEE
Q 016009 126 DFD-AQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIV----------DKKEFLTEVEALTEIRHRNIVKLYGF 193 (397)
Q Consensus 126 ~~~-~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~~~~~ 193 (397)
+|. ..+.||.|+||+||+|... +++.||+|++.......... ....+.+|++++++++|+||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 454 3467999999999999654 78999999986532221100 01257789999999999999999999
Q ss_pred EecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEe
Q 016009 194 CSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVA 273 (397)
Q Consensus 194 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 273 (397)
+..++..++||||+. |+|.+++... ..+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++|+
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEEC
Confidence 999999999999997 5899888643 3489999999999999999999998 99999999999999999999999
Q ss_pred eeccccccCC--------------CCCCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccc
Q 016009 274 DFGIAKFLKP--------------DSSNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSIS 338 (397)
Q Consensus 274 Dfg~~~~~~~--------------~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~ 338 (397)
|||++..... .........++..|+|||.+.+. .++.++||||||+++|||++|+.||.......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999876541 11112233467889999988764 46899999999999999999999986433211
Q ss_pred ccc-----c--cccccccc--------ccCCCCCCC-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 339 SSF-----L--NTDIELDE--------MLDPRLPAP-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 339 ~~~-----~--~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
... . ........ ......+.. ..........+.+++.+||+.+|++|||++|++.+
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 000 0 00000000 000000000 00001123568899999999999999999999864
No 355
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.9e-39 Score=313.54 Aligned_cols=255 Identities=26% Similarity=0.413 Sum_probs=195.5
Q ss_pred HHHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec---
Q 016009 121 VRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH--- 196 (397)
Q Consensus 121 ~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--- 196 (397)
.+-.++|+....||+||||.||+++.+ ||+.||||++.... .......+.+|+..|++|+|||||+++..+.+
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 345578888999999999999999766 99999999997643 22335678999999999999999998732200
Q ss_pred --------------------------------------------------------------------------------
Q 016009 197 -------------------------------------------------------------------------------- 196 (397)
Q Consensus 197 -------------------------------------------------------------------------------- 196 (397)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred ----------------------------C--------CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHH
Q 016009 197 ----------------------------A--------RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADA 240 (397)
Q Consensus 197 ----------------------------~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 240 (397)
+ ..+|+=||||+..+|.++++.+.... .-...|+++.+|++|
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEG 709 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHH
Confidence 0 12467788998888888876654211 356789999999999
Q ss_pred HHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC------------------CCCCCcccccccccccCccc
Q 016009 241 LSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK------------------PDSSNWTEFAGTYGYVAPEL 302 (397)
Q Consensus 241 l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~------------------~~~~~~~~~~g~~~y~aPE~ 302 (397)
|+|+|+. ++|||||||.||++|++..+||+|||+++... .+....+..+||.-|+|||+
T Consensus 710 LaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 9999999 99999999999999999999999999998621 01113356789999999999
Q ss_pred ccCCC---CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccC
Q 016009 303 AYTMK---ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLN 379 (397)
Q Consensus 303 ~~~~~---~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 379 (397)
+.+.. |+.|+|+||+||+++||+.- |+- .+ ..-..+..+.++.++.+.+...+....=.++|.++++
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~T--sM-----ERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGT--SM-----ERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhcc---CCc--hH-----HHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhc
Confidence 87654 99999999999999999973 321 11 1111234444555655533344444556688999999
Q ss_pred CCCCCCCCHHHHHH
Q 016009 380 ESPESRPTMKIVSQ 393 (397)
Q Consensus 380 ~~P~~RPt~~~vl~ 393 (397)
.||.+|||+.|+|.
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999986
No 356
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.9e-38 Score=281.59 Aligned_cols=254 Identities=21% Similarity=0.276 Sum_probs=195.7
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCC-CcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLP-SDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
+|.+.+.||+|+||.||++... .+..+++|.++.... ........++..|+.++++++|||++++++++......++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4677888999999999999654 345566666543211 11112234577899999999999999999999998999999
Q ss_pred EEeccCCCHHHhhcccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 204 YEFLKRGSLAAILSSDA-AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|||+++++|.+++.... ....+++.+++.++.|++.|+.|||+. +++|+||+|+||++++ +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999886422 234689999999999999999999998 9999999999999975 569999999987765
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
..........++..|+|||...+..++.++|+||||+++|+|++|..|+....... ..........+. .
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~ 225 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS--------VVLRIVEGPTPS---L 225 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCCCCC---C
Confidence 44333344567889999999888888999999999999999999999986322111 011111111111 1
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......+.+++.+||+.+|++||++.++++.
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 12344568899999999999999999999864
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.6e-38 Score=291.75 Aligned_cols=260 Identities=25% Similarity=0.365 Sum_probs=198.6
Q ss_pred CCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC-----e
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR-----H 199 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~ 199 (397)
+|.+.+.||+|++|.||+|... +++.|++|++..... .....+.+.+|+++++.++|+||+++.+++.... .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence 4677889999999999999765 589999999875322 1233567899999999999999999999987765 7
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.+++|||++ ++|.+++.... .+++..++.++.+++.||+|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred eEEEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 899999998 48888886543 689999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCC---CCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccc--------------c
Q 016009 280 FLKPDS---SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS--------------F 341 (397)
Q Consensus 280 ~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~--------------~ 341 (397)
...... .......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||......... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 231 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL 231 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHh
Confidence 765443 123344678899999999887 7899999999999999999999998643321000 0
Q ss_pred c-ccccccccccCCCCCCCCc----chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 342 L-NTDIELDEMLDPRLPAPSR----SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 342 ~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
. .........+......... ...+....+.+++.+||+.+|++|||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0000000000000000000 001124568899999999999999999999875
No 358
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=296.08 Aligned_cols=253 Identities=28% Similarity=0.422 Sum_probs=196.2
Q ss_pred CCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC------e
Q 016009 127 FDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR------H 199 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 199 (397)
|...+.||+|+||.||+|+ ..+|+.||||.++.... ....+....|+++|++++|+|||++++.-++.. .
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~---~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS---LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc---cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 4455679999999999997 56899999999986432 234677889999999999999999999765543 5
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC--CCCc--EEEeee
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD--LEFE--AHVADF 275 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--~~~~--~kl~Df 275 (397)
..+|||||.+|||...+....+...|++.+.+.++.+++.||.|||++ +|+||||||.||++- ++|+ -||+||
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 689999999999999999888778899999999999999999999998 999999999999993 3343 699999
Q ss_pred ccccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------cccccc
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------LNTDIE 347 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------~~~~~~ 347 (397)
|.|+.++.+. .....+||..|++||.... ..|+..+|.|||||++||++||..||.......... ......
T Consensus 169 G~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 169 GAARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred cccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 9999887544 6677899999999999884 789999999999999999999999986433221000 000000
Q ss_pred cccc----------cCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCC
Q 016009 348 LDEM----------LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRP 386 (397)
Q Consensus 348 ~~~~----------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 386 (397)
.... ....++.+....+.....+...+..++..+|++|-
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 0000 11123333333444455566777777888888886
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=9.1e-38 Score=288.28 Aligned_cols=262 Identities=26% Similarity=0.379 Sum_probs=196.5
Q ss_pred HHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec-C
Q 016009 120 IVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH-A 197 (397)
Q Consensus 120 ~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~ 197 (397)
+...+++|+..+.||.|+||.||++.. .+++.||+|++...... ....+.+..|++++++++|||++++.+++.. .
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST--PVLAKRTYRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc--cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 345678899999999999999999964 47899999987643221 1234678899999999999999999999865 5
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...++++||+ +++|.+++... .+++.....++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.
T Consensus 83 ~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 83 EDIYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred CcEEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccc
Confidence 6789999998 56898887542 478888899999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-----cc--ccccccc
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-----FL--NTDIELD 349 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-----~~--~~~~~~~ 349 (397)
+...... .....++..|+|||.+.+ ..++.++||||||+++|+|+||+.||......... .. ..+....
T Consensus 155 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 155 ARIQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred ccccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 8754322 123456888999998765 56899999999999999999999998643221000 00 0000000
Q ss_pred cccCC-------CCC----CCC-cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 350 EMLDP-------RLP----APS-RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 350 ~~~~~-------~~~----~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+. ..+ .+. .........+.+++.+||+.+|++|||+.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000 000 0001123568899999999999999999999864
No 360
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.8e-37 Score=275.50 Aligned_cols=242 Identities=27% Similarity=0.352 Sum_probs=195.5
Q ss_pred ccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||.|+||.||++... +++.+++|.+..... ........+..|++++++++|||++++++.+..+...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh-cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 689999999999765 589999999865322 112235678999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccc
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEF 291 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 291 (397)
|.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.............
T Consensus 80 L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (250)
T cd05123 80 LFSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF 153 (250)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence 999997543 489999999999999999999998 99999999999999999999999999998765433333445
Q ss_pred cccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHH
Q 016009 292 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIV 371 (397)
Q Consensus 292 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (397)
.++..|+|||...+...+.++|+||||+++|++++|+.||...... .....+.......+.. ....+.
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~----~~~~l~ 221 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--------EIYEKILKDPLRFPEF----LSPEAR 221 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHhcCCCCCCCC----CCHHHH
Confidence 6788999999998888899999999999999999999998643210 0111111122222111 134578
Q ss_pred HHHHHccCCCCCCCCCH---HHHHH
Q 016009 372 EVVFSCLNESPESRPTM---KIVSQ 393 (397)
Q Consensus 372 ~l~~~cl~~~P~~RPt~---~~vl~ 393 (397)
+++.+||..||++||++ ++++.
T Consensus 222 ~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred HHHHHHhcCCHhhCCCcccHHHHHh
Confidence 99999999999999999 66654
No 361
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=299.43 Aligned_cols=260 Identities=24% Similarity=0.419 Sum_probs=217.6
Q ss_pred HHHHHHHhcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEE
Q 016009 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFC 194 (397)
Q Consensus 117 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 194 (397)
++.+...++-|++.+++|.|.+|.||+++ .++|+..|+|++...... .+++..|.++|+.. .|||++.++|++
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-----deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-----EEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-----cHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 34445567788999999999999999995 457899999988753322 46778899999988 699999999998
Q ss_pred e-----cCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc
Q 016009 195 S-----HARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE 269 (397)
Q Consensus 195 ~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 269 (397)
. .++++|||||||.+||..|++.... +..+.|..+..|+..++.|+.+||.. .++|||+|-.|||++.++.
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 4 4578999999999999999998766 57899999999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCCCCCcccccccccccCcccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccc
Q 016009 270 AHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNT 344 (397)
Q Consensus 270 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~ 344 (397)
+||.|||++.+++.......+..||+.|||||++... .|+..+|+||||++..||.-|.+|+-++.++..-+..
T Consensus 162 VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I- 240 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI- 240 (953)
T ss_pred EEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-
Confidence 9999999999888766666778999999999998754 3677999999999999999999998766654332221
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 345 DIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
....++....+..+..++.++|..|+.+|-++||++.+++++
T Consensus 241 --------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 241 --------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred --------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 111122233456778899999999999999999999998864
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=9.4e-38 Score=282.39 Aligned_cols=260 Identities=25% Similarity=0.358 Sum_probs=198.3
Q ss_pred CCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|+..+.||+|++|.||+|... +++.+++|.+..... .....+.+..|++++++++|+|++++++++...+..++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE--EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc--cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence 455677999999999999765 589999999875331 12234677899999999999999999999999999999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|++ ++|.+++.... ..+++.++..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 79 YCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred CcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 998 58999997653 3589999999999999999999998 99999999999999999999999999998765443
Q ss_pred CCcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-----cc--ccccc---cccc--c
Q 016009 286 SNWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-----FL--NTDIE---LDEM--L 352 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-----~~--~~~~~---~~~~--~ 352 (397)
.......++..|+|||.+.+. .++.++||||||++++|+++|+.||......... .. ..+.. ...+ .
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 153 RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 333334567789999998766 7899999999999999999999998643221000 00 00000 0000 0
Q ss_pred CCCCCCCC-----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 DPRLPAPS-----RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 ~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+...+... .........+.+++..||+.||++||++++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00111000 0011124568999999999999999999999864
No 363
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=321.35 Aligned_cols=253 Identities=28% Similarity=0.417 Sum_probs=200.7
Q ss_pred hcCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
+-+|.....||.|.||.||.| ...+|...|+|.++..... ........+|+.++..++|||+|+++|+-.+.+..+|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 345667778999999999999 5668999999998754333 2335678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
.||||++|+|.+.+.-.+. .++.....+..|++.|++|||+. |||||||||.||+|+.+|.+|++|||.|..+.
T Consensus 1312 FMEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEec
Confidence 9999999999999965443 55666677889999999999999 99999999999999999999999999998876
Q ss_pred CCCCC----cccccccccccCcccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 016009 283 PDSSN----WTEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPR 355 (397)
Q Consensus 283 ~~~~~----~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
..... .....||+.|||||++.+.. ...+.||||+|||.+||+||++||......-.-.+ .+...-.|.
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy----~V~~gh~Pq 1461 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY----HVAAGHKPQ 1461 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh----HHhccCCCC
Confidence 54322 23468999999999998654 45578999999999999999999875432110000 011122233
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
+|. ....+=.+++..|+..||++|.++.|+++.
T Consensus 1462 ~P~------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1462 IPE------RLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred Cch------hhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 321 234456788889999999999999888764
No 364
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=269.03 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=206.2
Q ss_pred HhcCCCCC-ccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEec---
Q 016009 123 ATNDFDAQ-YCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSH--- 196 (397)
Q Consensus 123 ~~~~~~~~-~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~--- 196 (397)
.|++|++. ++||-|-.|.|-.+.. .+++.+|+|++.. .....+|+++--.. .|||||.++++|++
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D---------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD---------SPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc---------CHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 35566544 5799999999999854 4789999999864 24456888876555 69999999999854
Q ss_pred -CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC---CCcEEE
Q 016009 197 -ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL---EFEAHV 272 (397)
Q Consensus 197 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl 272 (397)
...+.+|||+|+||.|...+++++. +.+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+. |..+||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 4677899999999999999987664 6799999999999999999999999 9999999999999965 456999
Q ss_pred eeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccccc
Q 016009 273 ADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML 352 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
+|||+++.... .....+.+-|+.|.|||++...+|+...|+||+||++|-|++|.+||-..... ....+....+.
T Consensus 206 tDfGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~----aispgMk~rI~ 280 (400)
T KOG0604|consen 206 TDFGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKRRIR 280 (400)
T ss_pred cccccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc----cCChhHHhHhh
Confidence 99999986543 33345568899999999999999999999999999999999999997533221 11122233344
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 DPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......|...+.+.+....++|+..|..+|.+|.|++++..+
T Consensus 281 ~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 281 TGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 444555666777888889999999999999999999999764
No 365
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.3e-37 Score=289.06 Aligned_cols=256 Identities=23% Similarity=0.381 Sum_probs=190.8
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC------
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA------ 197 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 197 (397)
++|...+.||+|+||.||+|.. .+|+.||+|++....... .....+.+|++++++++||||+++++++...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE--IFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc--cchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 6888889999999999999975 478999999987532221 2245688999999999999999999998654
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...++|+||+.. +|..+.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 345899999964 7776642 2488999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-------ccc-----
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-------LNT----- 344 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-------~~~----- 344 (397)
+...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... ...
T Consensus 164 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 164 ARHADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CcCCCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 8754322 223457888999998876 468899999999999999999999986432211000 000
Q ss_pred ---ccccccccC--CCCCCCC--cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 345 ---DIELDEMLD--PRLPAPS--RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 345 ---~~~~~~~~~--~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......... +..+... .........+.+++.+||+.||++||++.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 0000000 0001123457899999999999999999999864
No 366
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=275.77 Aligned_cols=243 Identities=26% Similarity=0.304 Sum_probs=198.0
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+..++||+|.||+|-+++. .+|+.+|+|++++..--. ......-+.|-++|+..+||.+..+--.++..+.+++
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia-kdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA-KDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheee-hHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 46889999999999999999964 479999999998643221 1223445678899999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||..||.|.-+|+..+ .+++...+.+-..|+.||.|||++ +||.||||.+|.|+|.+|++||+|||+.+.-.
T Consensus 246 VMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999999987644 488888888999999999999998 99999999999999999999999999998766
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccc-ccCCCCCCCCc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDE-MLDPRLPAPSR 361 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 361 (397)
.........+||+.|+|||++....|....|.|.+||++|||++|+.||-.-.. +.+-+ ++-..+..|..
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh---------~kLFeLIl~ed~kFPr~ 390 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH---------EKLFELILMEDLKFPRT 390 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---------hHHHHHHHhhhccCCcc
Confidence 566667789999999999999999999999999999999999999999742111 11111 11112222222
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCC
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRP 386 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RP 386 (397)
...+...|+...+.+||.+|.
T Consensus 391 ----ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 391 ----LSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ----CCHHHHHHHHHHhhcChHhhc
Confidence 222356677789999999995
No 367
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=9.9e-38 Score=286.35 Aligned_cols=263 Identities=24% Similarity=0.310 Sum_probs=192.1
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC-----
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA----- 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 197 (397)
.++|+..+.||+|+||.||+|... +++.+++|++....... .....+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD--GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC--CcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 468889999999999999999754 68999999986432211 1134567899999999999999999987443
Q ss_pred ---CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEee
Q 016009 198 ---RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVAD 274 (397)
Q Consensus 198 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 274 (397)
...++|+||+.+ +|...+.... ..+++.++..++.|+++||+|||+. +++|+||||+||++++++.++|+|
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 346999999875 6776665432 3589999999999999999999998 999999999999999999999999
Q ss_pred eccccccCCCCCC-----------cccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-
Q 016009 275 FGIAKFLKPDSSN-----------WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF- 341 (397)
Q Consensus 275 fg~~~~~~~~~~~-----------~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~- 341 (397)
||++......... .....+++.|+|||.+.+. .++.++||||||+++|||++|+.||..........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~ 238 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL 238 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999765432211 1223567889999987654 57899999999999999999999986433211000
Q ss_pred ------------ccccccccc----ccCCCCCCCC-cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 342 ------------LNTDIELDE----MLDPRLPAPS-RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 342 ------------~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+.. ......+... .........+.+++.+|++.||++|||+.|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000000 0000010000 0001122468899999999999999999999864
No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2e-37 Score=288.13 Aligned_cols=265 Identities=23% Similarity=0.341 Sum_probs=196.9
Q ss_pred HHHHHHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe
Q 016009 117 YDEIVRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS 195 (397)
Q Consensus 117 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 195 (397)
..++...+++|...+.||+|+||.||++.. .+++.||+|++..... .....+.+.+|++++++++||||+++.+++.
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 355667789999999999999999999964 5789999999865322 1223466888999999999999999999885
Q ss_pred cC------CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc
Q 016009 196 HA------RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE 269 (397)
Q Consensus 196 ~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 269 (397)
.. ...+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 43 3467888876 7899888754 2489999999999999999999998 9999999999999999999
Q ss_pred EEEeeeccccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccc--c-----c
Q 016009 270 AHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISS--S-----F 341 (397)
Q Consensus 270 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~--~-----~ 341 (397)
++|+|||++..... ......++..|+|||...+ ..++.++||||||+++|||++|+.||........ . .
T Consensus 159 ~kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 159 LKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred EEEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99999999875432 2233467889999998765 4678899999999999999999999853221100 0 0
Q ss_pred cccccccccccC----------CCCCCC--CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 342 LNTDIELDEMLD----------PRLPAP--SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 342 ~~~~~~~~~~~~----------~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.........+.+ +..+.. ..........+.+++.+|++.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000000 000000 00000123457899999999999999999999864
No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3e-37 Score=286.70 Aligned_cols=259 Identities=24% Similarity=0.354 Sum_probs=194.1
Q ss_pred HhcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC---
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR--- 198 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--- 198 (397)
..++|...+.||+|+||.||++. ..+|..||+|++..... .......+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 45689899999999999999996 45789999999864322 1223456889999999999999999999986543
Q ss_pred ---eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 199 ---HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 199 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
..++||||+ +++|.+++.. ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 358999998 7799888753 3589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc--c----cccccc
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF--L----NTDIEL 348 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~--~----~~~~~~ 348 (397)
|++...... .....++..|+|||.+.+ ..++.++|+||||+++|++++|+.||.......... . ......
T Consensus 163 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 163 GLARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred ccccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 998765432 223456889999998875 458899999999999999999999986432210000 0 000000
Q ss_pred ccccC--------CCCCCC-C----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 349 DEMLD--------PRLPAP-S----RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 349 ~~~~~--------~~~~~~-~----~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+. ..++.. . .........+.+++.+|++.||++|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000000 0 0001223458899999999999999999999853
No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.7e-37 Score=286.96 Aligned_cols=258 Identities=22% Similarity=0.327 Sum_probs=189.6
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC------
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA------ 197 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 197 (397)
.+|...+.||.|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 5788889999999999999965 4689999999864222 2356788999999999999999999776543
Q ss_pred --------CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC-CCC
Q 016009 198 --------RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD-LEF 268 (397)
Q Consensus 198 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~ 268 (397)
...++||||++ ++|.+++.. ..+++..++.++.|++.||.|||+. +++||||||+||+++ +++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 35789999997 588888753 2488999999999999999999998 999999999999997 456
Q ss_pred cEEEeeeccccccCCCCC---CcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc---
Q 016009 269 EAHVADFGIAKFLKPDSS---NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF--- 341 (397)
Q Consensus 269 ~~kl~Dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~--- 341 (397)
.++++|||++........ ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..........
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 789999999876533211 1122357888999997654 557889999999999999999999986433211000
Q ss_pred ----cccccccccc-------cCCCCCCCCcch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 342 ----LNTDIELDEM-------LDPRLPAPSRSV----QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 342 ----~~~~~~~~~~-------~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.......... ............ ......+.+++.+||+.||++|||+.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000000000 000000000000 1123468899999999999999999999863
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3e-37 Score=286.83 Aligned_cols=259 Identities=22% Similarity=0.361 Sum_probs=194.3
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe--
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH-- 199 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-- 199 (397)
..++|+..+.||+|++|.||+|... +++.||+|++...... ....+.+.+|+.++++++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS--AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch--hhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 3567888999999999999999765 6889999998643221 2234567889999999999999999988765544
Q ss_pred ----eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 200 ----SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 200 ----~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
.++|+||+ +++|.+++.. ..+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccc
Confidence 89999998 6699998864 3589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccc-----c--cccc-
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSF-----L--NTDI- 346 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~-----~--~~~~- 346 (397)
|++...... .....++..|+|||...+ ..++.++||||||+++||+++|+.||.......... . ..+.
T Consensus 163 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 163 GLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL 239 (343)
T ss_pred ccccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence 999865432 233467888999998765 367899999999999999999999985332210000 0 0000
Q ss_pred -------ccccccCCCCCCCCcch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 347 -------ELDEMLDPRLPAPSRSV----QEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 347 -------~~~~~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.....+........... ......+.+++.+||+.||++|||+.+|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000000000000000 1124568899999999999999999999864
No 372
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.2e-36 Score=303.82 Aligned_cols=148 Identities=28% Similarity=0.365 Sum_probs=130.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 203 (397)
++|.+.+.||+|+||.||+|... +++.||+|+++.... ........+..|+.+++.++||||+++++++......++|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 57888899999999999999765 789999999865222 1222346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
|||+.+++|.+++.... .+++..++.++.||+.||.|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999986543 488899999999999999999998 99999999999999999999999999875
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.5e-36 Score=280.92 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=189.2
Q ss_pred CCCCCccccccCcEEEEEEEeC-C--CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEec----C
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP-S--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSH----A 197 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~ 197 (397)
+|+..+.||+|+||.||++... + +..||+|++...... ....+.+.+|+++++++ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 78 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK--KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNF 78 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccC
Confidence 3667788999999999999754 4 788999998642221 12246788999999999 59999999987533 2
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
...++++||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||+
T Consensus 79 ~~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 79 NELYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred CcEEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 45788889886 6898888643 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCC----CcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccc-------ccccc
Q 016009 278 AKFLKPDSS----NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSS-------FLNTD 345 (397)
Q Consensus 278 ~~~~~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~-------~~~~~ 345 (397)
+........ ......|+..|+|||...+ ..++.++|+||+|+++|+|++|+.||......... .....
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 986543221 1223468899999998765 46889999999999999999999998643211000 00000
Q ss_pred cccccccCC----------CCC-CC-CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 346 IELDEMLDP----------RLP-AP-SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 346 ~~~~~~~~~----------~~~-~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.....+.++ ..+ .+ ..........+.+++.+|++.||++|||+.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 000 00 0000012346889999999999999999999875
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.4e-36 Score=264.41 Aligned_cols=224 Identities=21% Similarity=0.204 Sum_probs=176.8
Q ss_pred cCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCCHHH
Q 016009 136 GGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGSLAA 214 (397)
Q Consensus 136 G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~ 214 (397)
|.+|.||++.. .+++.+|+|++... ..+..|...+....|||++++++++...+..++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKS---------SEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecch---------hhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 79999999965 57899999998642 123345555556679999999999999999999999999999999
Q ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCccccccc
Q 016009 215 ILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGT 294 (397)
Q Consensus 215 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~ 294 (397)
++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||.+...... .....++
T Consensus 75 ~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~ 145 (237)
T cd05576 75 HISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVE 145 (237)
T ss_pred HHHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcC
Confidence 986543 489999999999999999999998 9999999999999999999999999987654432 1223456
Q ss_pred ccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHH
Q 016009 295 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVV 374 (397)
Q Consensus 295 ~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 374 (397)
..|+|||...+..++.++||||+|+++|||++|+.|+...... ........++ . .....+.+++
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~--~----~~~~~~~~li 209 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIP--E----WVSEEARSLL 209 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCc--c----cCCHHHHHHH
Confidence 7899999998888999999999999999999999886522110 0000000111 1 1234588899
Q ss_pred HHccCCCCCCCCCH-----HHHHH
Q 016009 375 FSCLNESPESRPTM-----KIVSQ 393 (397)
Q Consensus 375 ~~cl~~~P~~RPt~-----~~vl~ 393 (397)
.+|++.||++||++ ++++.
T Consensus 210 ~~~l~~dp~~R~~~~~~~~~~~~~ 233 (237)
T cd05576 210 QQLLQFNPTERLGAGVAGVEDIKS 233 (237)
T ss_pred HHHccCCHHHhcCCCccchHHHHc
Confidence 99999999999996 55553
No 375
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=281.14 Aligned_cols=247 Identities=25% Similarity=0.352 Sum_probs=204.8
Q ss_pred CccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 130 QYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
.++||+|.||+||-|. .++|+.||||++.+..... ....++.+|+.||++++||.||.+...|++.+..++|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~--kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT--KQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCC--chHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence 3679999999999995 4589999999987633222 234789999999999999999999999999999999999996
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC---CcEEEeeeccccccCCCC
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE---FEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~~~~~ 285 (397)
|.-|+-.|.... .++++.....++.||+.||.|||.+ +|+|+||||+|||+.+. -.+||+|||+++.+. +.
T Consensus 647 GDMLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg-Ek 720 (888)
T KOG4236|consen 647 GDMLEMILSSEK--GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG-EK 720 (888)
T ss_pred chHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecc-hh
Confidence 655555555444 4688888889999999999999999 99999999999999654 369999999999876 34
Q ss_pred CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHH
Q 016009 286 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQE 365 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
+.....+||+.|+|||++....|...-|+||.|+++|--++|..||+..... -+.+-+..+..|...+.+
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI----------ndQIQNAaFMyPp~PW~e 790 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI----------NDQIQNAAFMYPPNPWSE 790 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch----------hHHhhccccccCCCchhh
Confidence 4456679999999999999999999999999999999999999998743321 123334445555666778
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 366 KLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 366 ~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
......+||...++..-.+|.|.+.-+.+
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 88889999999999999999998876643
No 376
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.5e-37 Score=262.63 Aligned_cols=205 Identities=23% Similarity=0.349 Sum_probs=168.4
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC---C--CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP---S--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH 196 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 196 (397)
.....|+....||+|.||.||+|.-+ + ...+|+|+++...... .--....+|+.+++.++|||++.+..++.+
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t--GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~ 98 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT--GISMSACREIALLRELKHPNVISLVKVFLS 98 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC--CcCHHHHHHHHHHHHhcCCcchhHHHHHhc
Confidence 33457888999999999999999432 2 2379999998643211 123567899999999999999999999866
Q ss_pred -CCeeeEEEEeccCCCHHHhhcccc--ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC----Cc
Q 016009 197 -ARHSFLVYEFLKRGSLAAILSSDA--AAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE----FE 269 (397)
Q Consensus 197 -~~~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~ 269 (397)
+...++++||.+. +|...++-+. ..+.++-..+..|+.||+.|+.|||++ -|+||||||.|||+..+ |.
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~ 174 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGR 174 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCe
Confidence 7889999999976 8888876443 235688889999999999999999998 89999999999999877 89
Q ss_pred EEEeeeccccccCCCCCC---cccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCC
Q 016009 270 AHVADFGIAKFLKPDSSN---WTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRD 332 (397)
Q Consensus 270 ~kl~Dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~ 332 (397)
+||+|||+++.+...-.. ....+-|..|.|||.+.+. .||.+.|||+.||++.||+|-.+-|.
T Consensus 175 VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 175 VKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred eEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 999999999987654322 2445779999999998876 48999999999999999999776553
No 377
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-38 Score=274.41 Aligned_cols=243 Identities=24% Similarity=0.335 Sum_probs=199.5
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeE
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 202 (397)
.+|....+||+|+||.|-++..+ +.+.+|||++++..--+ ..+.+--+.|-++|... +-|.++.+..++++.+.+|+
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 47888999999999999999654 56789999998743321 12233345677777766 67889999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
||||+.||+|-.++++-+ .+.++.+..++.+||-||-+||++ +|+.||||..||++|.+|++||+|||+++.--
T Consensus 428 VMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999998887654 477788999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcc
Q 016009 283 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRS 362 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
.+.....+.+||+.|+|||++...+|...+|.|||||+||||+.|++||+.... ++-...+.+....-|.
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--------~elF~aI~ehnvsyPK-- 571 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQAIMEHNVSYPK-- 571 (683)
T ss_pred cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHHccCcCcc--
Confidence 666667788999999999999999999999999999999999999999984332 2223444454444332
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC
Q 016009 363 VQEKLRSIVEVVFSCLNESPESRP 386 (397)
Q Consensus 363 ~~~~~~~l~~l~~~cl~~~P~~RP 386 (397)
..+.+...+....+.+.|.+|.
T Consensus 572 --slSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 572 --SLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred --cccHHHHHHHHHHhhcCCcccc
Confidence 3344566778888999999994
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-39 Score=266.36 Aligned_cols=251 Identities=27% Similarity=0.367 Sum_probs=193.8
Q ss_pred CccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEEEec
Q 016009 130 QYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
...||.|.||+|+|-. .+.|+..|||+++.... ..+.++++.|.+...+- +.||||+++|.+-.++..|+.||.|
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~---~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI---EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc---hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 4569999999999995 45899999999986332 23467888998865554 7999999999999999999999999
Q ss_pred cCCCHHHhhccc--cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 208 KRGSLAAILSSD--AAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 208 ~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
. .||+.+...- .....+++.-+-.|..-..+||.||.... .|+|||+||+|||+|..|.+||+|||.+..+..+-
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si 222 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI 222 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence 5 4776665321 11235888888899999999999999874 89999999999999999999999999998765332
Q ss_pred CCcccccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccccc--CCCCCCCCc
Q 016009 286 SNWTEFAGTYGYVAPELAYT--MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEML--DPRLPAPSR 361 (397)
Q Consensus 286 ~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 361 (397)
..+.-+|...|||||.+.. ..|+.+|||||||++|||+.||+.|+.....+ -+.+..++ |+.......
T Consensus 223 -AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv-------feql~~Vv~gdpp~l~~~~ 294 (361)
T KOG1006|consen 223 -AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV-------FEQLCQVVIGDPPILLFDK 294 (361)
T ss_pred -HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH-------HHHHHHHHcCCCCeecCcc
Confidence 2344578889999998863 34899999999999999999999997633221 11122222 222222233
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+....+..++..|+.+|-..||.+.++.++
T Consensus 295 ~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 295 ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 333566789999999999999999999998753
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=281.84 Aligned_cols=240 Identities=24% Similarity=0.299 Sum_probs=192.2
Q ss_pred hcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 201 (397)
+..|.....+|.|+|+.|-.+. ..+++..+||++.... .+-.+|+.++... +|||++++.+.+.++.+.|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~--------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA--------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc--------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 5677888889999999998885 4578899999987531 2234677676666 7999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEe-CCCCcEEEeeeccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLL-DLEFEAHVADFGIAKF 280 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfg~~~~ 280 (397)
+|||.+.|+-+.+.+.... ....++..|+.+++.|+.|||.+ ++|||||||+|||+ ++.++++|+|||.++.
T Consensus 393 ~v~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 9999999998888775443 22277888999999999999998 99999999999999 6889999999999988
Q ss_pred cCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCC
Q 016009 281 LKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPS 360 (397)
Q Consensus 281 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (397)
...+ ....+-|..|.|||++....|++++|+||||++||+|++|+.||.....- .+....+..+...
T Consensus 466 ~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s--- 532 (612)
T KOG0603|consen 466 LERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFS--- 532 (612)
T ss_pred Cchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccc---
Confidence 7655 33446688999999999999999999999999999999999998633221 0111111111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 361 RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 361 ~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+....+|+.+||+.||.+||+|.++..+
T Consensus 533 ---~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 533 ---ECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ---cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 2344567888999999999999999998753
No 380
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-36 Score=235.67 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=195.2
Q ss_pred CCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+|...++||+|.||+||+|+ .++++.||+|+++..... ..-....++|+-+++.++|.|||++++....+..+-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd--egvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC--CCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 45556789999999999995 457889999998753332 223567899999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
|||.. +|..+...-. ..++.+....++.|+.+||.|+|++ ++.||||||.|.+++.+|++|++|||+++-+.-.
T Consensus 81 e~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred HHhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 99965 8888876543 3588899999999999999999999 9999999999999999999999999999987765
Q ss_pred CCCcccccccccccCcccccCCC-CCcchhhHHHHHHHHHHHh-CCCCCCcccccc---c-------ccccccccccccc
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK-GKHPRDFLSSIS---S-------SFLNTDIELDEML 352 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~---~-------~~~~~~~~~~~~~ 352 (397)
-...+..+-|..|.+|.++.+.+ |+...|+||-||++.|+.. |++-|....... . ........+..+-
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence 55556667899999999998765 8999999999999999997 444443211100 0 0000000111111
Q ss_pred CCCC-C--CCCcchHHHH----HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 353 DPRL-P--APSRSVQEKL----RSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 353 ~~~~-~--~~~~~~~~~~----~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
|-.. + .....+.+.. ..=.+++...+.-+|.+|.++++.++.
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1110 0 1111222222 223466777888899999999988764
No 381
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-37 Score=299.00 Aligned_cols=257 Identities=24% Similarity=0.293 Sum_probs=203.2
Q ss_pred HHHHHhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC
Q 016009 119 EIVRATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA 197 (397)
Q Consensus 119 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 197 (397)
++.-..++|.+.++||+|+||.|..++.+ +++.||.|++.+..- ....+..-|..|-++|..-+.+.|+.+.-.|++.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eM-lKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEM-LKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHH-hhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 44455678999999999999999999765 688999999865211 1123356789999999999999999999999999
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
+.+|+|||||+||+|-.++.... .+++.-+..++..|+-||.-||+. |+|||||||+|||+|..|++||+|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999997765 588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CcccccccccccCccccc----C-CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 016009 278 AKFLKPDSS-NWTEFAGTYGYVAPELAY----T-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 278 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~----~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
+-.+..+.. .....+|||.|++||++. + +.|...+|.||+||++|||+.|..||-...-+. . -..+
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslve-T-------Y~KI 293 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVE-T-------YGKI 293 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHH-H-------HHHH
Confidence 887775443 456679999999999886 3 568999999999999999999999985332211 0 1111
Q ss_pred cCC--CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 016009 352 LDP--RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPT---MKIVSQ 393 (397)
Q Consensus 352 ~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt---~~~vl~ 393 (397)
++- .+..|.. .+.+....+||...+. +|+.|.. ++++-.
T Consensus 294 m~hk~~l~FP~~--~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 294 MNHKESLSFPDE--TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred hchhhhcCCCcc--cccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 111 1222211 1234456777777666 7888877 777654
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=4.9e-35 Score=258.19 Aligned_cols=240 Identities=29% Similarity=0.452 Sum_probs=191.6
Q ss_pred CcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCCHHHh
Q 016009 137 GHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGSLAAI 215 (397)
Q Consensus 137 ~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 215 (397)
+||.||+|... +|+.+++|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK---RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH---HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 58999999776 589999999875322211 57899999999999999999999999999999999999999999999
Q ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccccccc
Q 016009 216 LSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTY 295 (397)
Q Consensus 216 l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~ 295 (397)
+.... .+++.+++.++.+++.++.|||+. +++|+||+|+||++++++.++++|||.+....... ......++.
T Consensus 78 ~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~ 150 (244)
T smart00220 78 LKKRG---RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTP 150 (244)
T ss_pred HHhcc---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCc
Confidence 86543 288999999999999999999998 99999999999999999999999999998765432 233456788
Q ss_pred cccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHH
Q 016009 296 GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVF 375 (397)
Q Consensus 296 ~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 375 (397)
.|++||...+..++.++||||||++++++++|..||....... ............. ..........+.+++.
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 222 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-------ELFKKIGKPKPPF-PPPEWKISPEAKDLIR 222 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-------HHHHHHhccCCCC-ccccccCCHHHHHHHH
Confidence 9999999988889999999999999999999999986421110 0011111111110 0000003356889999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 016009 376 SCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 376 ~cl~~~P~~RPt~~~vl~~ 394 (397)
+|+..+|++||++.++++.
T Consensus 223 ~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHccCCchhccCHHHHhhC
Confidence 9999999999999999863
No 383
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-36 Score=257.78 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=203.8
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 201 (397)
.++|...++||+|+|.+|..+++. +.+.+|+|++++..... ..+.+-...|-.+..+. +||.+|.+..+++++..++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 467889999999999999999764 67889999987654433 23455667788888777 7999999999999999999
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
+|.||++||+|--+++.. +.++++.++.+...|+-||.|||++ ||+.||||..|||+|.+|++||+|||+.+.-
T Consensus 328 fvieyv~ggdlmfhmqrq---rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeehhhh---hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999998777554 3599999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCc
Q 016009 282 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSR 361 (397)
Q Consensus 282 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (397)
-......++.+||+.|+|||++++..|....|.|++|++++||+.|+.||+....-.......+--...++...+..|..
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprs 481 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRS 481 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccce
Confidence 65666667889999999999999999999999999999999999999999976632222111111223344444443322
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCC
Q 016009 362 SVQEKLRSIVEVVFSCLNESPESRP 386 (397)
Q Consensus 362 ~~~~~~~~l~~l~~~cl~~~P~~RP 386 (397)
. +.....+++.-+++||.+|.
T Consensus 482 l----svkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 482 L----SVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred e----ehhhHHHHHHhhcCCcHHhc
Confidence 1 22344567788999999995
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.2e-35 Score=286.72 Aligned_cols=261 Identities=20% Similarity=0.222 Sum_probs=168.8
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-C----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEE----
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-S----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGF---- 193 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~---- 193 (397)
..++|...+.||+|+||.||+|... + +..||+|++..... .+....| .++...+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 4678999999999999999999764 4 68999998754111 1111111 1122222222222111
Q ss_pred --EecCCeeeEEEEeccCCCHHHhhcccccc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCcee
Q 016009 194 --CSHARHSFLVYEFLKRGSLAAILSSDAAA-----------------QELGWSQRMNVIKGVADALSYLHHDCFPPIVH 254 (397)
Q Consensus 194 --~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH 254 (397)
+......++||||+.+++|.+++...... .......+..++.|++.||+|||+. +|+|
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiH 278 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVH 278 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 24567889999999999999998653210 0112344668999999999999998 9999
Q ss_pred ccCCCCcEEeCC-CCcEEEeeeccccccCCCCC-CcccccccccccCcccccCC----------------------CCCc
Q 016009 255 RDISSKNLLLDL-EFEAHVADFGIAKFLKPDSS-NWTEFAGTYGYVAPELAYTM----------------------KITE 310 (397)
Q Consensus 255 ~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~----------------------~~~~ 310 (397)
|||||+|||+++ ++.+||+|||+++.+..... ......+++.|+|||.+... .++.
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999999999986 57999999999986543322 22445789999999965322 2345
Q ss_pred chhhHHHHHHHHHHHhCCCCCCcccccc-ccccccc---cccccccCCCCCCC----CcchHHHHHHHHHHHHHccCCCC
Q 016009 311 KCDVYSFGVLALEVIKGKHPRDFLSSIS-SSFLNTD---IELDEMLDPRLPAP----SRSVQEKLRSIVEVVFSCLNESP 382 (397)
Q Consensus 311 ~~Dv~s~G~~l~el~tg~~p~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~~P 382 (397)
++|||||||++|||+++..|++...... ....... ........+..... ............+|+.+|++.||
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 6799999999999999887754221100 0000000 00111111111000 00000011235689999999999
Q ss_pred CCCCCHHHHHHH
Q 016009 383 ESRPTMKIVSQQ 394 (397)
Q Consensus 383 ~~RPt~~~vl~~ 394 (397)
++|||+++++++
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999875
No 385
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=263.43 Aligned_cols=270 Identities=21% Similarity=0.294 Sum_probs=201.8
Q ss_pred CCcccHHHHHHHhcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc--CC---
Q 016009 112 EGKLVYDEIVRATNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR--HR--- 185 (397)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~--- 185 (397)
+|.+.|..--..+++|.+...+|+|.||.|..+. ...+..||+|+++... .-.+..+-|+++|+++. .|
T Consensus 76 dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-----kYreAa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 76 DGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-----KYREAALIEIEVLQKINESDPNGK 150 (415)
T ss_pred CceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-----HHhhHHHHHHHHHHHHHhcCCCCc
Confidence 3444443333447889999999999999999994 4468899999987521 12455678999999993 23
Q ss_pred -ceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEe
Q 016009 186 -NIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLL 264 (397)
Q Consensus 186 -niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 264 (397)
-++.+.+|+...++.++|+|.+ |-|+.+++..+.. .+++..+++.++.|++++++|||+. +++|.||||+|||+
T Consensus 151 ~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILf 225 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILF 225 (415)
T ss_pred eEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEE
Confidence 3777888899999999999987 6699999987654 5789999999999999999999999 99999999999999
Q ss_pred CC--------------------CCcEEEeeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHH
Q 016009 265 DL--------------------EFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEV 324 (397)
Q Consensus 265 ~~--------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el 324 (397)
.+ +..++|+|||.|++-. ...+..+.|..|.|||++.+..++.++||||+||+|.|+
T Consensus 226 vss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~---e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 226 VSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH---EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred eccceEEEeccCCccceeccCCCcceEEEecCCcceec---cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 32 3458999999998633 334667889999999999999999999999999999999
Q ss_pred HhCCCCCCcccc-------------ccccccccc-------------------cccccccCCCCCC--CCcchHHHHHHH
Q 016009 325 IKGKHPRDFLSS-------------ISSSFLNTD-------------------IELDEMLDPRLPA--PSRSVQEKLRSI 370 (397)
Q Consensus 325 ~tg~~p~~~~~~-------------~~~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~~~~l 370 (397)
.||..-|.-... .+....... .+.....++..+. .......+...|
T Consensus 303 ytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 303 YTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred eccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 999887642221 000000000 0001111111110 001122344579
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 016009 371 VEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 371 ~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
++|+..+|..||.+|+|+.|++.+
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHHccCccccccHHHHhcC
Confidence 999999999999999999999864
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.8e-34 Score=274.65 Aligned_cols=267 Identities=17% Similarity=0.226 Sum_probs=181.6
Q ss_pred HhcCCCCCccccccCcEEEEEEEe-----------------CCCCEEEEEecCCCCCCcch----------hcHHHHHHH
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAEL-----------------PSGQVVAIKKFHSPLPSDQI----------VDKKEFLTE 175 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~-----------------~~~~~vavK~~~~~~~~~~~----------~~~~~~~~e 175 (397)
..++|+..++||+|+||+||+|.. .+++.||||++......... ...+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999953 24568999998642211000 011223457
Q ss_pred HHHHHhccCCce-----eeeEEEEec--------CCeeeEEEEeccCCCHHHhhccccc---------------------
Q 016009 176 VEALTEIRHRNI-----VKLYGFCSH--------ARHSFLVYEFLKRGSLAAILSSDAA--------------------- 221 (397)
Q Consensus 176 ~~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------- 221 (397)
+.++.+++|.++ ++++++|.. ++..+|||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788876654 677787743 3568999999999999999864211
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC-cccccccccccCc
Q 016009 222 AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN-WTEFAGTYGYVAP 300 (397)
Q Consensus 222 ~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~g~~~y~aP 300 (397)
...++|..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......... .....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788999999999999999998 9999999999999999999999999999765432211 1122347899999
Q ss_pred ccccCCCC----------------------CcchhhHHHHHHHHHHHhCCC-CCCccccccccccccccccc---cccCC
Q 016009 301 ELAYTMKI----------------------TEKCDVYSFGVLALEVIKGKH-PRDFLSSISSSFLNTDIELD---EMLDP 354 (397)
Q Consensus 301 E~~~~~~~----------------------~~~~Dv~s~G~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~---~~~~~ 354 (397)
|.+..... ..+.||||+||++++|++|.. |+.................. .....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 98754321 134799999999999999875 65432211111100000000 00001
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHH
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESP---ESRPTMKIVSQQ 394 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P---~~RPt~~~vl~~ 394 (397)
... ............+++.+++..+| .+|+|++|++++
T Consensus 460 ~~~--~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 460 KYD--FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred CCC--cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 110 11112233557888999999766 689999999875
No 387
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=262.64 Aligned_cols=257 Identities=27% Similarity=0.381 Sum_probs=192.5
Q ss_pred CCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchh---cHHHHHHHHHHHHhccCCceeeeEEEEec-CCee
Q 016009 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIV---DKKEFLTEVEALTEIRHRNIVKLYGFCSH-ARHS 200 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 200 (397)
+|-..++||+|+|+.||++ .+...+.||||+-.......... --+...+|.+|-+.|.||.||++++|+.- .+..
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 3445567999999999999 56677889999754322222111 12346789999999999999999999964 4567
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC---CCCcEEEeeecc
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD---LEFEAHVADFGI 277 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~ 277 (397)
+-|+|||+|.+|+-+|..+. .+++.+++.|+.||+.||.||... .++|||-||||.|||+- ..|.+||+|||+
T Consensus 544 CTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred eeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 89999999999999998765 489999999999999999999986 45899999999999994 457899999999
Q ss_pred ccccCCCCCC-------cccccccccccCcccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccc
Q 016009 278 AKFLKPDSSN-------WTEFAGTYGYVAPELAYTM----KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDI 346 (397)
Q Consensus 278 ~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~ 346 (397)
++.+..+... .+..+||..|++||.+.-+ +.+.|.||||.||++|.++.|+.||+....-. ..+...
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dILqeN- 697 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DILQEN- 697 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HHHhhh-
Confidence 9988765433 2446799999999987643 47889999999999999999999997433211 111100
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 016009 347 ELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392 (397)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl 392 (397)
.+-....-.++..+ ....+...+|.+||+.--++|....++.
T Consensus 698 TIlkAtEVqFP~KP----vVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 698 TILKATEVQFPPKP----VVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred chhcceeccCCCCC----ccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 01111111122211 1223467788999999999998877764
No 388
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-36 Score=247.72 Aligned_cols=262 Identities=24% Similarity=0.391 Sum_probs=191.9
Q ss_pred cCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEec-------
Q 016009 125 NDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSH------- 196 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------- 196 (397)
+.|+...++|+|.||.||+|+. ++|+.||+|+...... . ..-....++|+++|..++|+|++.++..|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-K-eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-K-EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-c-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 3455567799999999999965 4678899987653211 1 1123456899999999999999999998843
Q ss_pred -CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 197 -ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 197 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
....|+||++|+. +|..+|.... ..++..++.+++.++..||.|+|.. .|+|||+|+.|+|++.++.+||+||
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecc
Confidence 2347999999976 8888887654 4689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC----CcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccc------------
Q 016009 276 GIAKFLKPDSS----NWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSIS------------ 338 (397)
Q Consensus 276 g~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~------------ 338 (397)
|+++.+..... ..++.+-|..|.+||.+.+ ..++++.|||.-||++.||+||.+-+.......
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 99977654322 2455677999999998775 468999999999999999999987765332211
Q ss_pred --ccccccc-ccc-ccccCCCCC-CCCcchHHHHH------HHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 339 --SSFLNTD-IEL-DEMLDPRLP-APSRSVQEKLR------SIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 339 --~~~~~~~-~~~-~~~~~~~~~-~~~~~~~~~~~------~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..|...+ -.+ ..+--+.++ .......+.+. ...+|+..++..||.+|+++.+++.+
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 0000000 000 000000011 00011112222 56788999999999999999999864
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=278.08 Aligned_cols=245 Identities=25% Similarity=0.401 Sum_probs=189.5
Q ss_pred CCCCccccccCcEE-EEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEEE
Q 016009 127 FDAQYCIGNGGHGS-VYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 127 ~~~~~~lg~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 204 (397)
|...+++|.|+-|+ ||+|.. +|+.||||++-.. ..+-..+|+..|+.- .|||||++++.-.+....|+..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e-------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE-------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH-------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44556788988765 799988 6889999997531 234567899999998 6999999999999999999999
Q ss_pred EeccCCCHHHhhccccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC---C--CcEEEeeeccc
Q 016009 205 EFLKRGSLAAILSSDAA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL---E--FEAHVADFGIA 278 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~--~~~kl~Dfg~~ 278 (397)
|.|. .+|++++..... .....-...+.+..|++.||++||+. +||||||||.||||+. + ..++|+|||++
T Consensus 583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccc
Confidence 9995 599999977411 01111134578899999999999998 9999999999999975 3 46899999999
Q ss_pred cccCCCCCC---cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhC-CCCCCccccccccccccccccccccCC
Q 016009 279 KFLKPDSSN---WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-KHPRDFLSSISSSFLNTDIELDEMLDP 354 (397)
Q Consensus 279 ~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
+.+..+... .....||.+|+|||++....-+..+||||+||++|+.++| .+||+....-..+.......+..+..
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~- 737 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEP- 737 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeecc-
Confidence 998766543 3456799999999999998888899999999999999995 99998654322222222222111110
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..++ ...+||.+|++++|..||++.+|+.+
T Consensus 738 --------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 738 --------LPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred --------CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 1112 57789999999999999999999863
No 390
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=266.51 Aligned_cols=244 Identities=24% Similarity=0.385 Sum_probs=197.1
Q ss_pred CCCCCccccccCcEEEEEEEeCCCC-EEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSGQ-VVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
+++....||-|+||.|=++..++.. .+|+|.+++..- ......+.+..|-.+|...+.|.||+++-.|.+....|++|
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hI-VdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHI-VDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhc-cchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 4445567999999999998765433 488888765222 12223566788999999999999999999999999999999
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
|-|-||.|...++.++ .++......++..+.+|++|||++ +||.|||||+|.++|.+|-+||.|||+++.+..+
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999998765 488888889999999999999999 9999999999999999999999999999998866
Q ss_pred CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 285 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 285 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
...+ +.+||+.|.|||++.....+..+|.||||+++|||++|.+||....++.-...... .++.+- +| .
T Consensus 574 ~KTw-TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk-Gid~i~---~P------r 642 (732)
T KOG0614|consen 574 RKTW-TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK-GIDKIE---FP------R 642 (732)
T ss_pred Ccee-eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh-hhhhhh---cc------c
Confidence 6554 47999999999999999999999999999999999999999987666532221110 111111 11 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC
Q 016009 365 EKLRSIVEVVFSCLNESPESRPT 387 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt 387 (397)
...+...+++.+.+..+|.+|.-
T Consensus 643 ~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 643 RITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ccchhHHHHHHHHHhcCcHhhhc
Confidence 22344678888989999999975
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-34 Score=264.83 Aligned_cols=213 Identities=23% Similarity=0.334 Sum_probs=174.6
Q ss_pred HHHHHHHh---cCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEE
Q 016009 117 YDEIVRAT---NDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYG 192 (397)
Q Consensus 117 ~~~~~~~~---~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 192 (397)
|-.+.++. .-|..++.||-|+||.|.++. .++...+|.|.+++.... ..........|-+||...+.+.||+|+-
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl-~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL-MRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHH-hhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 33444443 346677889999999999994 445678999998753221 1122345678999999999999999999
Q ss_pred EEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEE
Q 016009 193 FCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 193 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
.|++++.+|+||||++||++-.+|...+. +.+..++.++.++++|+++.|.. |+|||||||+|||||.+|++||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKL 770 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKL 770 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceee
Confidence 99999999999999999999999976553 77888888999999999999999 9999999999999999999999
Q ss_pred eeeccccccC---------CCCCC---------------------------------cccccccccccCcccccCCCCCc
Q 016009 273 ADFGIAKFLK---------PDSSN---------------------------------WTEFAGTYGYVAPELAYTMKITE 310 (397)
Q Consensus 273 ~Dfg~~~~~~---------~~~~~---------------------------------~~~~~g~~~y~aPE~~~~~~~~~ 310 (397)
+|||++.-+. .++.. ....+||+.|+|||++....++.
T Consensus 771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q 850 (1034)
T KOG0608|consen 771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ 850 (1034)
T ss_pred eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence 9999975321 00000 02346999999999999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCCcccc
Q 016009 311 KCDVYSFGVLALEVIKGKHPRDFLSS 336 (397)
Q Consensus 311 ~~Dv~s~G~~l~el~tg~~p~~~~~~ 336 (397)
.+|.||.||+||||+.|+.||-...+
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLADTP 876 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccCCCC
Confidence 99999999999999999999875544
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=230.99 Aligned_cols=205 Identities=23% Similarity=0.379 Sum_probs=168.7
Q ss_pred HHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCC
Q 016009 121 VRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHAR 198 (397)
Q Consensus 121 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 198 (397)
+.+.++......||+|++|.|-+-++ .+|+..|+|.+...... ...++.++|+++..+. .+|.+|.++|......
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~---q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS---QEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh---HHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 33444555567799999999988854 58999999999865443 2357788899886665 7999999999999999
Q ss_pred eeeEEEEeccCCCHHHhhccc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 199 HSFLVYEFLKRGSLAAILSSD-AAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
..++.||.|. .||+.+...- .....+++..+-+|+..+..||.|||++. .++|||+||+|||++.+|++|++|||.
T Consensus 119 dvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 119 DVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccc
Confidence 9999999995 4887776432 12346889999999999999999999984 899999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccC----CCCCcchhhHHHHHHHHHHHhCCCCCC
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYT----MKITEKCDVYSFGVLALEVIKGKHPRD 332 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~G~~l~el~tg~~p~~ 332 (397)
+..+..+-. .+...|...|||||.+.. ..|+.+|||||||+.+.||.+++.||+
T Consensus 196 sG~L~dSiA-kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 196 SGYLVDSIA-KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred ceeehhhhH-HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 987654322 233578889999998763 368999999999999999999999976
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=9.5e-32 Score=231.75 Aligned_cols=212 Identities=35% Similarity=0.611 Sum_probs=184.1
Q ss_pred ccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
||+|.+|.||++... +++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++||+++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999775 48999999987532211 34779999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC-CCcEEEeeeccccccCCCCCCccc
Q 016009 212 LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKFLKPDSSNWTE 290 (397)
Q Consensus 212 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~ 290 (397)
|.+++.... ..+++..++.++.++++++.+||+. +++|+||+|.||+++. ++.++|+|||.+............
T Consensus 78 l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (215)
T cd00180 78 LKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT 152 (215)
T ss_pred HHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc
Confidence 999987542 3588999999999999999999999 9999999999999999 899999999999876544322334
Q ss_pred ccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 016009 291 FAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRS 369 (397)
Q Consensus 291 ~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
..+...|++||..... ..+.++|+|++|++++++ ..
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~ 189 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PE 189 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HH
Confidence 5678899999998877 788999999999999999 34
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 370 IVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 370 l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
+.+++..|++.+|++||++.++++.+
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 88899999999999999999998764
No 394
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-32 Score=244.32 Aligned_cols=133 Identities=26% Similarity=0.430 Sum_probs=112.6
Q ss_pred hcCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-----C---CceeeeEEEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-----H---RNIVKLYGFC 194 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~ 194 (397)
..+|-..++||-|.|++||++ ...+.+.||+|+.+. ...-.+..+.|+++|++++ | ..||+|+++|
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-----AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-----AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-----hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 357888999999999999999 556788999999764 2233567889999999983 3 3699999999
Q ss_pred e----cCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC
Q 016009 195 S----HARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD 265 (397)
Q Consensus 195 ~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 265 (397)
. ++.++++|+|++ |.+|..++..... +.++...+.+|+.||+.||.|||..| +|||.||||+|||+.
T Consensus 152 khsGpNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 152 KHSGPNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred eecCCCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 4 567899999998 6688888876554 55999999999999999999999998 999999999999994
No 395
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-33 Score=261.60 Aligned_cols=253 Identities=27% Similarity=0.393 Sum_probs=205.4
Q ss_pred hcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+....+|+|.+|.|||++. .+++..|+|.++.... .+.+-+.+|+-+++..+||||+.++|.+...+..++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~----dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG----DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC----ccccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 45788889999999999999964 4789999999876322 234567789999999999999999999999999999
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
.||||.+|+|++..+... ++++.++..++++..+|+.|||+. +-+|||||-.||++++.|.+|++|||.+..+.
T Consensus 90 cMEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred EEEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhh
Confidence 999999999999886544 699999999999999999999999 88999999999999999999999999998887
Q ss_pred CCCCCcccccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 283 PDSSNWTEFAGTYGYVAPELAY---TMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 283 ~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
..-.......||+.|||||+.. .+.|..++|||+.|+...|+-.-+.|-....++...++.. ....+|.-...
T Consensus 164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT----kS~~qpp~lkD 239 (829)
T KOG0576|consen 164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT----KSGFQPPTLKD 239 (829)
T ss_pred hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh----ccCCCCCcccC
Confidence 7666667789999999999764 5679999999999999999988887744333333222211 11111111111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
. ..+...+-++++.|+.++|++|||++-++.
T Consensus 240 k---~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 K---TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred C---ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1 233455888999999999999999987765
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=1.3e-32 Score=224.56 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=192.4
Q ss_pred hcCCCCCccccccCcEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecC--Ce
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHA--RH 199 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~ 199 (397)
.++|++.+.+|+|.++.||.|. ..+.+.++||.++. ..++.+.+|+.+|+.+. ||||+.+++...++ ..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 4678888999999999999994 56788999999874 34688999999999997 99999999998665 45
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-CcEEEeeeccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGIA 278 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 278 (397)
..||+||+.+.+...+. +.++...+...+.+++.||.|+|+. ||.|||+||.|+++|.. -.++|+|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchH
Confidence 68999999999888776 3477888999999999999999999 99999999999999865 46999999999
Q ss_pred cccCCCCCCcccccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCcccccc-------------------
Q 016009 279 KFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGKHPRDFLSSIS------------------- 338 (397)
Q Consensus 279 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~------------------- 338 (397)
.++.+.... ...+.+..|..||.+.. ..|+..-|+|||||++..|+..+.||-......
T Consensus 181 EFYHp~~eY-nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 181 EFYHPGKEY-NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hhcCCCcee-eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 988765443 33456777889998875 457889999999999999999999973221110
Q ss_pred -ccccccccccccccCCCCCCCC------cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 339 -SSFLNTDIELDEMLDPRLPAPS------RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
......+.....++......++ +.-.-...+..+++.+.+..|-++|||++|...
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0000001111111111110000 000011245788999999999999999999865
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-33 Score=233.30 Aligned_cols=258 Identities=26% Similarity=0.380 Sum_probs=192.0
Q ss_pred CCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecC-----CeeeE
Q 016009 129 AQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHA-----RHSFL 202 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l 202 (397)
..+-||-|+||.||.+..+ +|+.|+.|++..-. ......+.+.+|+++|...+|.|++..++..+-. .+.|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf--q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF--QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHH--HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 3566999999999999654 89999999986422 2334567899999999999999999998876543 35678
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
+.|.|.. +|.+.+-.. +.++-+.+.-+..||++||.|||+. +|.||||||.|.|++.|-.+||+|||+++..+
T Consensus 135 ~TELmQS-DLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHHh-hhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 8888854 788777543 4588888999999999999999998 99999999999999999999999999999876
Q ss_pred CCCC-CcccccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCcccccccccc---------------ccc
Q 016009 283 PDSS-NWTEFAGTYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFL---------------NTD 345 (397)
Q Consensus 283 ~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~---------------~~~ 345 (397)
.+.. ..+..+-|..|.|||.+++. .|+...||||.||++.|++..+.-|...+++..-.. .-+
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 5443 44556789999999999875 589999999999999999998877764443220000 001
Q ss_pred cccccccCCCCCCCC-------cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 346 IELDEMLDPRLPAPS-------RSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 346 ~~~~~~~~~~~~~~~-------~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
+....++......|. ........+-..+...++..||++|.+.++.+..+
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111111111111111 01112223455677789999999999998887654
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=227.09 Aligned_cols=257 Identities=23% Similarity=0.343 Sum_probs=187.8
Q ss_pred cCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe------cC
Q 016009 125 NDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS------HA 197 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------~~ 197 (397)
.+|...+.+|.|.- .|..+ ..-.+++||+|++..+... ....+...+|...+..+.|+|+++++.++. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n--~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN--QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc--CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 35666677888877 55555 3336899999998776332 334566789999999999999999999883 23
Q ss_pred CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 198 RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 198 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
.+.|+|||+|.. +|...+.. +++-..+..|..|++.|++|||+. +|+||||||+||++..+..+||.|||+
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 467999999954 78777752 366678899999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccc-------------------
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSIS------------------- 338 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~------------------- 338 (397)
++.-... -..+..+.+-.|.|||++.+..+.+.+||||.||++.||++|+.-|.......
T Consensus 165 ar~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 165 ARTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred hcccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 9854433 23455677889999999999889999999999999999999987654211100
Q ss_pred -----ccccc-cc----ccccc-ccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 339 -----SSFLN-TD----IELDE-MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 339 -----~~~~~-~~----~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
..+.. .+ ....+ .-|..++.......-......+++.+||..||++|.+++++|++
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00000 00 00000 11111111111111123457788999999999999999999874
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=8.8e-30 Score=222.14 Aligned_cols=199 Identities=32% Similarity=0.532 Sum_probs=170.6
Q ss_pred CCCCccccccCcEEEEEEEeCC-CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
|...+.||+|++|.||++...+ ++.+++|.+...... ...+.+.+|++.+++++|+|++++++++......++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEe
Confidence 4556789999999999997764 889999998753322 236788999999999999999999999999899999999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDS 285 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 285 (397)
|+++++|.+++..... .+++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 78 YCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred ccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 9999999999875432 278999999999999999999998 99999999999999999999999999988765432
Q ss_pred -CCcccccccccccCcccc-cCCCCCcchhhHHHHHHHHHHHhCCCCCCc
Q 016009 286 -SNWTEFAGTYGYVAPELA-YTMKITEKCDVYSFGVLALEVIKGKHPRDF 333 (397)
Q Consensus 286 -~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~ 333 (397)
.......++..|++||.. ....++.++|+|+||++++||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334677889999998 666788899999999999999999999853
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-31 Score=241.02 Aligned_cols=199 Identities=25% Similarity=0.353 Sum_probs=167.2
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchh----cHHHHHHHHHHHHhcc---CCceeeeEEEEec
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIV----DKKEFLTEVEALTEIR---HRNIVKLYGFCSH 196 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~----~~~~~~~e~~~l~~l~---h~niv~~~~~~~~ 196 (397)
.+|...+.+|.|+||.|+.+.++ +...|+||.+.+..--.... ..-.+-.|++||..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46888899999999999999665 56789999886532111100 1123567999999997 9999999999999
Q ss_pred CCeeeEEEEec-cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeee
Q 016009 197 ARHSFLVYEFL-KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADF 275 (397)
Q Consensus 197 ~~~~~lv~e~~-~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 275 (397)
++..||+||-. ++-+|.+++.... .+++.+...|+.||+.|+++||++ +|||||||-+||.++.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 99999999965 4668999997654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCcccccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCC
Q 016009 276 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPR 331 (397)
Q Consensus 276 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~tg~~p~ 331 (397)
|.+..... ..+...+||.+|.|||++.+.+| ...-|||++|++||-++....||
T Consensus 715 gsaa~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 715 GSAAYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred cchhhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 99876543 33566799999999999999887 45689999999999999888885
No 401
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=1.9e-30 Score=234.45 Aligned_cols=201 Identities=26% Similarity=0.299 Sum_probs=167.6
Q ss_pred HHHhcCCCCCccccccCcEEEEEEEe-CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc------CCceeeeEEE
Q 016009 121 VRATNDFDAQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR------HRNIVKLYGF 193 (397)
Q Consensus 121 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~ 193 (397)
+..-+.|.+....|+|-|++|.+|.. ..|+.||||++... ..-.+.=+.|+++|++|. -.|.++++-.
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 34456788888999999999999954 46889999999752 222355678999999995 3588999999
Q ss_pred EecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC-cEEE
Q 016009 194 CSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF-EAHV 272 (397)
Q Consensus 194 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl 272 (397)
|...+++|||+|-+ ..+|.+.|...+..-.|....+..++.|+.-||..|... +|+|.||||.|||+++.- .+||
T Consensus 503 F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKL 578 (752)
T KOG0670|consen 503 FKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKL 578 (752)
T ss_pred hhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeee
Confidence 99999999999977 569999998776555688899999999999999999998 999999999999998764 5899
Q ss_pred eeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 016009 273 ADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 332 (397)
Q Consensus 273 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~ 332 (397)
||||.|....... .+...-+--|.|||++.|..|+...|+||.||+||||.||+..|.
T Consensus 579 CDfGSA~~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp 636 (752)
T KOG0670|consen 579 CDFGSASFASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP 636 (752)
T ss_pred ccCcccccccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence 9999997654322 222334557999999999999999999999999999999997764
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-30 Score=214.79 Aligned_cols=250 Identities=20% Similarity=0.364 Sum_probs=183.7
Q ss_pred cCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEE-EecCCeee
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGF-CSHARHSF 201 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~~~~~~ 201 (397)
+.|.+.+.||+|.||.+-+++++ +.+.+++|.+..+. ...++|.+|...--.| .|.||+.-++. |++.+...
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 46888899999999999999765 56789999887533 3467899998776666 58999987764 57777888
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEe-CC-CCcEEEeeecccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLL-DL-EFEAHVADFGIAK 279 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill-~~-~~~~kl~Dfg~~~ 279 (397)
+++||++.|+|.+-+...+ +.+....+++.|++.|+.|+|++ ++||||||.+|||+ +. ..++||+|||..+
T Consensus 99 F~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccc
Confidence 9999999999998886643 66777889999999999999999 99999999999999 33 3479999999987
Q ss_pred ccCCCCCCcccccccccccCcccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 016009 280 FLKPDSSNWTEFAGTYGYVAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354 (397)
Q Consensus 280 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
..+. .......+..|.+||..... ...+.+|||.||++++.++||+.||.........+..... ......+
T Consensus 172 k~g~---tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~-w~~rk~~ 247 (378)
T KOG1345|consen 172 KVGT---TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ-WLKRKNP 247 (378)
T ss_pred ccCc---eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH-HhcccCc
Confidence 5432 22223345678899976432 3577899999999999999999999844433333322211 1122223
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
..+... ......+.++..+-+..+|++|=...++.+
T Consensus 248 ~~P~~F---~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 248 ALPKKF---NPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred cCchhh---cccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 333221 223344667777899999999955554443
No 403
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=5.7e-29 Score=208.81 Aligned_cols=165 Identities=23% Similarity=0.260 Sum_probs=124.8
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcc
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWT 289 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 289 (397)
|+|.+++...+ ..+++.+++.++.|++.||+|||+. + ||+||+++.++.+++ ||++.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 68999997543 4599999999999999999999998 4 999999999999999 99987654322
Q ss_pred cccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHH-
Q 016009 290 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLR- 368 (397)
Q Consensus 290 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 368 (397)
..|++.|+|||++.+..++.++|||||||++|||+||+.||............. .... .+..+...........
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 138 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEIL---LNGM-PADDPRDRSNLESVSAA 138 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHH---HHHh-ccCCccccccHHHHHhh
Confidence 267899999999999999999999999999999999999986443221111000 0000 0110100011122222
Q ss_pred -HHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 369 -SIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 369 -~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.+.+++.+||+.+|++|||+.|+++++.
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 5899999999999999999999998864
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.1e-29 Score=259.76 Aligned_cols=195 Identities=18% Similarity=0.197 Sum_probs=139.4
Q ss_pred hccC-CceeeeEEEE-------ecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 016009 181 EIRH-RNIVKLYGFC-------SHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 252 (397)
Q Consensus 181 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 252 (397)
.++| +||.++++++ ......++++||+ +++|.+++.... ..+++.+++.++.||++||.|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 4555 5788888877 2334567888987 669999996532 4589999999999999999999998 99
Q ss_pred eeccCCCCcEEeCC-------------------CCcEEEeeeccccccCCCC----------------CCcccccccccc
Q 016009 253 VHRDISSKNLLLDL-------------------EFEAHVADFGIAKFLKPDS----------------SNWTEFAGTYGY 297 (397)
Q Consensus 253 vH~dlk~~Nill~~-------------------~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~g~~~y 297 (397)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999964 4456666666665321100 000113578889
Q ss_pred cCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHc
Q 016009 298 VAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSC 377 (397)
Q Consensus 298 ~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 377 (397)
+|||++.+..++.++|||||||+||||++|..|+.......... ......+.. ........+++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSL------RHRVLPPQI-------LLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHH------HHhhcChhh-------hhcCHHHHHHHHHh
Confidence 99999999999999999999999999999998865321110000 000111110 01122356788899
Q ss_pred cCCCCCCCCCHHHHHHH
Q 016009 378 LNESPESRPTMKIVSQQ 394 (397)
Q Consensus 378 l~~~P~~RPt~~~vl~~ 394 (397)
|+++|.+|||+.|++++
T Consensus 249 L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 249 LHPEPSCRPSMSELLQS 265 (793)
T ss_pred CCCChhhCcChHHHhhc
Confidence 99999999999999874
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=1.3e-28 Score=218.19 Aligned_cols=200 Identities=28% Similarity=0.424 Sum_probs=166.2
Q ss_pred HHHHHHhcCCCCCccccccCcEEEEEEEeC----CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEE
Q 016009 118 DEIVRATNDFDAQYCIGNGGHGSVYRAELP----SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYG 192 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~ 192 (397)
+++....+.|...++||.|.|++||++... ..+.||+|.+.... ....+.+|+++|..+ -+.||+++.+
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts------~p~ri~~El~~L~~~gG~~ni~~~~~ 102 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS------SPSRILNELEMLYRLGGSDNIIKLNG 102 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc------CchHHHHHHHHHHHhccchhhhcchh
Confidence 344455677889999999999999999543 46789999987522 246689999999999 5999999999
Q ss_pred EEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-CcEE
Q 016009 193 FCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAH 271 (397)
Q Consensus 193 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~k 271 (397)
++...+...+|+||++.....+++. .++..++...+..+..||+++|++ ||||||+||+|++.+.. +.-.
T Consensus 103 ~~rnnd~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 103 CFRNNDQVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred hhccCCeeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCce
Confidence 9999999999999999999999884 377889999999999999999999 99999999999999754 5688
Q ss_pred EeeeccccccC-----------------C-CC--------------------------CCcccccccccccCcccccC-C
Q 016009 272 VADFGIAKFLK-----------------P-DS--------------------------SNWTEFAGTYGYVAPELAYT-M 306 (397)
Q Consensus 272 l~Dfg~~~~~~-----------------~-~~--------------------------~~~~~~~g~~~y~aPE~~~~-~ 306 (397)
|.|||++.... . .. ......+||++|.|||++.. .
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 99999987210 0 00 00123469999999998875 4
Q ss_pred CCCcchhhHHHHHHHHHHHhCCCCCC
Q 016009 307 KITEKCDVYSFGVLALEVIKGKHPRD 332 (397)
Q Consensus 307 ~~~~~~Dv~s~G~~l~el~tg~~p~~ 332 (397)
.-++++||||.|++++-+++++.||-
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred CcCCccceeeccceeehhhccccccc
Confidence 57889999999999999999999973
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.9e-27 Score=197.40 Aligned_cols=245 Identities=20% Similarity=0.320 Sum_probs=183.9
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccC
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 209 (397)
..+|.....|..|+|+++. ..+++|++... .....-.++|..|.-.|+-..||||.+++|.|..+....++..||+.
T Consensus 195 ~tkl~e~hsgelwrgrwqg-ndivakil~vr--~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG-NDIVAKILNVR--EVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhccCCCcccccccccC-cchhhhhhhhh--hcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 3457788899999999964 45677776531 12222246788899999999999999999999999999999999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEe--eeccccccCCCCCC
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVA--DFGIAKFLKPDSSN 287 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~--Dfg~~~~~~~~~~~ 287 (397)
|||...+++... -..+-.+..+++.++|+|++|||+.. +-|.---|.+..|++|++.+++|+ |--++.+ .
T Consensus 272 gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfq---e--- 343 (448)
T KOG0195|consen 272 GSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ---E--- 343 (448)
T ss_pred hHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeee---c---
Confidence 999999987653 34667789999999999999999973 223344689999999999988873 3222211 0
Q ss_pred cccccccccccCcccccCCCCC---cchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchH
Q 016009 288 WTEFAGTYGYVAPELAYTMKIT---EKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQ 364 (397)
Q Consensus 288 ~~~~~g~~~y~aPE~~~~~~~~---~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (397)
....-.+.||+||.+...+.+ ..+|+|||++++||+.|...||.+.+++.-..-.. -+.+.+.++ +
T Consensus 344 -~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----leglrv~ip--p---- 412 (448)
T KOG0195|consen 344 -VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----LEGLRVHIP--P---- 412 (448)
T ss_pred -cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh----hccccccCC--C----
Confidence 112346789999998876543 47899999999999999999998877654332221 111222222 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 365 EKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 365 ~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.....+.+++.-|++.||.+||.+..|+-.||
T Consensus 413 gis~hm~klm~icmnedpgkrpkfdmivpile 444 (448)
T KOG0195|consen 413 GISRHMNKLMNICMNEDPGKRPKFDMIVPILE 444 (448)
T ss_pred CccHHHHHHHHHHhcCCCCcCCCcceehhhHH
Confidence 22345889999999999999999999988776
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.6e-25 Score=204.94 Aligned_cols=168 Identities=20% Similarity=0.211 Sum_probs=128.9
Q ss_pred HHhcCCCCCccccccCcEEEEEEEeC--CCCEEEEEecCCCCCC-cchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAELP--SGQVVAIKKFHSPLPS-DQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
...++|...+.||+|+||+||+|... +++.||||++...... ......+.+.+|+++|++++|+|+++.+..+ +
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C
Confidence 34567999999999999999999654 5778899987532110 1122356799999999999999998533322 4
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccC-CCCcEEeCCCCcEEEeeecc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDI-SSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg~ 277 (397)
..++||||++|++|... .. .. ...++.+++++|.|||+. +|+|||| ||+|||++.++.++|+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 57999999999999732 11 11 146788999999999998 9999999 99999999999999999999
Q ss_pred ccccCCCCCC--------cccccccccccCcccccC
Q 016009 278 AKFLKPDSSN--------WTEFAGTYGYVAPELAYT 305 (397)
Q Consensus 278 ~~~~~~~~~~--------~~~~~g~~~y~aPE~~~~ 305 (397)
++.+...... .....++..|+|||++..
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 9976543311 134567888999998764
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-24 Score=199.40 Aligned_cols=254 Identities=21% Similarity=0.254 Sum_probs=187.7
Q ss_pred CCCCCccccccCcEEEEEEEeCCC--CEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccC----CceeeeEEEE-ecCC
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSG--QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH----RNIVKLYGFC-SHAR 198 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~ 198 (397)
+|.+.+.||+|+||.||.+...+. ..+|+|......... ...+..|..++..+.. +++..+++.. ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~----~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK----PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC----CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 788999999999999999976543 478888765422211 1257788999988863 6888999888 5777
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-----CcEEEe
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-----FEAHVA 273 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-----~~~kl~ 273 (397)
..++||+.+ |.+|.++..... .+.++..+...|+.|++.+|.++|+. |++||||||.|+.+... ..+.|.
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEE
Confidence 889999976 889999886555 46799999999999999999999999 99999999999999765 469999
Q ss_pred eecccc--ccCCCCC-------C-cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccc
Q 016009 274 DFGIAK--FLKPDSS-------N-WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLN 343 (397)
Q Consensus 274 Dfg~~~--~~~~~~~-------~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~ 343 (397)
|||+++ .+..... . .....||..|.++..+.+...+.+.|+||++.++.|+..|..||............
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 999998 3211111 1 12356999999999999999999999999999999999999998654432110000
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
........... ... ..+..+.++...+-..+..++|....+...|
T Consensus 250 ~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l 294 (322)
T KOG1164|consen 250 EKDPRKLLTDR----FGD---LKPEEFAKILEYIDSLDYEDKPDYEKLAELL 294 (322)
T ss_pred HHHhhhhcccc----ccC---CChHHHHHHHHHhhccCCcCCCCHHHHHHHH
Confidence 00000111110 001 1123455666666668999999998887765
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=6.8e-23 Score=189.23 Aligned_cols=260 Identities=28% Similarity=0.424 Sum_probs=193.9
Q ss_pred CCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCC-ceeeeEEEEecCCeeeEEEE
Q 016009 127 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR-NIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e 205 (397)
|.....||.|+||.||++... ..+++|.+........ .....+.+|+.+++.+.|+ +++++.+++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS-KEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch-hHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 455677999999999999776 7899999876433321 2367899999999999988 79999999977777899999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC-cEEEeeeccccccCCC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAKFLKPD 284 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~ 284 (397)
++.++++.+++........++......++.+++.++.|+|.. +++|||+||+||+++..+ .++++|||.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 999999997765443112588899999999999999999999 899999999999999998 7999999999865543
Q ss_pred CC------CcccccccccccCcccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 016009 285 SS------NWTEFAGTYGYVAPELAYT---MKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPR 355 (397)
Q Consensus 285 ~~------~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
.. ......++..|+|||...+ ...+...|+||+|++++++++|..|+....... ..............+.
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS-ATSQTLKIILELPTPS 234 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc-cHHHHHHHHHhcCCcc
Confidence 32 2355689999999999987 578899999999999999999999965443200 0000000000000000
Q ss_pred CC--CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 356 LP--APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 356 ~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.. ............+.+++..|+..+|..|.+..+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 00 000000112245778888999999999998887654
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=4.3e-25 Score=215.12 Aligned_cols=254 Identities=21% Similarity=0.299 Sum_probs=185.9
Q ss_pred CCccccccCcEEEEEEEe-CCCCEEEEEecCC---CCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 129 AQYCIGNGGHGSVYRAEL-PSGQVVAIKKFHS---PLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
..+.+|.|.+|.|+.... ......+.|.... +....... ...+..|+.+-..++|||++..+..+.+.....-.|
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~-~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKY-NYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHH-hhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456799999997777643 3344444444331 11111111 122667888888899999988887777666666669
Q ss_pred EeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCC
Q 016009 205 EFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD 284 (397)
Q Consensus 205 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 284 (397)
|||++ +|..++.... .++..++..++.|+..|+.|+|+. ++.|||+|++|++++.+|.+||+|||.+..+...
T Consensus 401 E~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 9999986542 477788999999999999999999 9999999999999999999999999999876544
Q ss_pred CC----CcccccccccccCcccccCCCCCc-chhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 285 SS----NWTEFAGTYGYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 285 ~~----~~~~~~g~~~y~aPE~~~~~~~~~-~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
.. .....+|+..|+|||.+.+..|.+ ..||||.|+++..|++|+.||.........+.. ...... ......+
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~-~~~~~~--~~~~~~~ 550 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT-NNYSDQ--RNIFEGP 550 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh-hccccc--cccccCh
Confidence 33 235578999999999999999876 589999999999999999998755443222100 000000 0001112
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
.......+.....++.++++.||.+|.|+++|++
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 2233445566888999999999999999999986
No 411
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.91 E-value=4.7e-25 Score=215.58 Aligned_cols=246 Identities=21% Similarity=0.239 Sum_probs=182.7
Q ss_pred CCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYE 205 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 205 (397)
++...+.||++.|=+|.+|+.+.|. |+||++-+...........+-+.|++ ...++|||.+++.-+-......|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666788999999999999998887 99999865443333222333344444 455689999999888888888899999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc--CC
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL--KP 283 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~--~~ 283 (397)
|..+ +|.|.+..+.- +...+...|+.|+..|+..+|.. +|+|||||.+|||++.-.-+.|+||...+.. ..
T Consensus 102 yvkh-nLyDRlSTRPF---L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRPF---LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccchH---HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9865 89999976543 67778888999999999999999 9999999999999999999999999765432 21
Q ss_pred CC-CCc----ccccccccccCcccccCC-----------CCCcchhhHHHHHHHHHHHh-CCCCCCcccccccccc---c
Q 016009 284 DS-SNW----TEFAGTYGYVAPELAYTM-----------KITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFL---N 343 (397)
Q Consensus 284 ~~-~~~----~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~---~ 343 (397)
++ ..+ .+...-.+|+|||.+... ..+++.||||+||++.||++ |++||+..+-...... .
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 11 111 233445689999976531 15788999999999999998 7888875544322111 1
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 344 TDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.+..++.+-|+ .++.++..|++.||.+|.++++.|+.
T Consensus 255 ~e~~Le~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 255 PEQLLEKIEDV--------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhCcCc--------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 11112222221 37889999999999999999999975
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-22 Score=175.20 Aligned_cols=250 Identities=17% Similarity=0.249 Sum_probs=188.8
Q ss_pred CCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCeeeEE
Q 016009 126 DFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 203 (397)
.|.+.++||+|.||.++.| .+-++++||||.-.. .+ +.-++..|....+.| ..++|...+-+...+.+-.||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc--cC----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 6888999999999999999 466899999997432 11 245788999999988 578999888888888888999
Q ss_pred EEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-----CcEEEeeeccc
Q 016009 204 YEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-----FEAHVADFGIA 278 (397)
Q Consensus 204 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-----~~~kl~Dfg~~ 278 (397)
+|.+ |-||+|++.-.+ +.++.+++..+|.|++.-++|+|++ .+|.|||||+|.||..- ..+.++|||++
T Consensus 103 idLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9987 789999885433 5799999999999999999999999 99999999999999643 35899999999
Q ss_pred cccCCCCCC-------cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 016009 279 KFLKPDSSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 279 ~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
+.+...... .....||.+||+-..+.+.+-+.+.|.=|+|-++++.+-|..||..+..-... ..-..+
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK-----~kYeKI 251 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK-----EKYEKI 251 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH-----HHHHHh
Confidence 987654332 23467999999999999999999999999999999999999999865431100 011111
Q ss_pred cCCCCC-CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 016009 352 LDPRLP-APSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392 (397)
Q Consensus 352 ~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl 392 (397)
-+..-. .........+.++..-+.-.=..+-++-|..+-+.
T Consensus 252 Ge~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr 293 (449)
T KOG1165|consen 252 GETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLR 293 (449)
T ss_pred ccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 121111 11112223344555555555556667777765443
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=1.8e-23 Score=178.01 Aligned_cols=174 Identities=13% Similarity=0.138 Sum_probs=133.2
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHH------HHHHHHHHHhccCCceeeeEEEEecC
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKE------FLTEVEALTEIRHRNIVKLYGFCSHA 197 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~------~~~e~~~l~~l~h~niv~~~~~~~~~ 197 (397)
.++|...+++|.|+||.||.... ++..+|+|.++....... ..... +.+|++.+.++.|++|..+..++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~-~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTE-RFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchH-HHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 57899999999999999999766 577899999976443322 11222 67999999999999999999886532
Q ss_pred --------CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc
Q 016009 198 --------RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE 269 (397)
Q Consensus 198 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 269 (397)
...+++|||++|.+|.++.. ++. ....+++.++..+|+. +++|||++|+||++++++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-
Confidence 35789999999999988732 222 2456899999999999 999999999999999988
Q ss_pred EEEeeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh
Q 016009 270 AHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK 326 (397)
Q Consensus 270 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t 326 (397)
++|+|||.......+.. .. .+.....+..++|+|+||+.+.....
T Consensus 173 i~liDfg~~~~~~e~~a-~d-----------~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKA-KD-----------RIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEEECCCcccccchhh-HH-----------HHHHHhHhcccccccceeEeehHHHH
Confidence 99999998765421111 00 02333346678999999999877653
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=8.6e-23 Score=172.13 Aligned_cols=143 Identities=22% Similarity=0.210 Sum_probs=108.6
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchh----------------------cHHHHHHHHHHHHhccCCce
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIV----------------------DKKEFLTEVEALTEIRHRNI 187 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~ni 187 (397)
...||+|+||.||+|..++|+.||||+++......... .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35699999999999988899999999997532211100 01223459999999988776
Q ss_pred eeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCceeccCCCCcEEeCC
Q 016009 188 VKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHRDISSKNLLLDL 266 (397)
Q Consensus 188 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~ivH~dlk~~Nill~~ 266 (397)
.....+... ..++||||++++++....... ..+++.+...++.|++.+|.++ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 443333222 238999999998776543222 3588999999999999999999 677 999999999999998
Q ss_pred CCcEEEeeecccccc
Q 016009 267 EFEAHVADFGIAKFL 281 (397)
Q Consensus 267 ~~~~kl~Dfg~~~~~ 281 (397)
++.++|+|||++...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 478999999998743
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.8e-23 Score=171.35 Aligned_cols=255 Identities=19% Similarity=0.292 Sum_probs=192.9
Q ss_pred hcCCCCCccccccCcEEEEEE-EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccC-CceeeeEEEEecCCeee
Q 016009 124 TNDFDAQYCIGNGGHGSVYRA-ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH-RNIVKLYGFCSHARHSF 201 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~ 201 (397)
...|...+.||+|+||.+|.| ...+|..||+|.-..... -.++..|..+.+.+++ ..|..+..|..+...-.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~------hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK------HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC------CcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 347888999999999999999 567899999998554222 3467889999999974 67777888888888889
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC---CcEEEeeeccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE---FEAHVADFGIA 278 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~ 278 (397)
+|||.. |-||++++.-.. +.++..+++-++-|++.-++|+|.+ +++||||||+|.|+.-+ ..+.++|||++
T Consensus 88 lVMdLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeeecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccch
Confidence 999987 789999986433 4689999999999999999999999 99999999999999654 46899999999
Q ss_pred cccCCCCCC-------cccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccc
Q 016009 279 KFLKPDSSN-------WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 279 ~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
+.+...... ..+..||..|.+--.+.+..-+.+.|+=|+|.+|.++--|..||.......... .-+.+
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q-----KyEkI 236 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ-----KYEKI 236 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH-----HHHHH
Confidence 876543221 245679999998888877778889999999999999999999998655422111 11122
Q ss_pred cCCCCCCCCc-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 352 LDPRLPAPSR-SVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 352 ~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
....+..+.+ .....+.++.-.+.-|=..--++-|...-+-+.+
T Consensus 237 ~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF 281 (341)
T KOG1163|consen 237 SEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF 281 (341)
T ss_pred HHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence 2222222111 1123345566777778887788888776665544
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.89 E-value=2.8e-23 Score=193.50 Aligned_cols=209 Identities=27% Similarity=0.475 Sum_probs=158.8
Q ss_pred HHhccCCceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCc-eeccC
Q 016009 179 LTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPI-VHRDI 257 (397)
Q Consensus 179 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i-vH~dl 257 (397)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.... ..++|.-...++.+++.||+|+|+. +| +|+.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 457899999999999999999999999999999999998743 4689999999999999999999997 44 99999
Q ss_pred CCCcEEeCCCCcEEEeeeccccccCC--CCCCcccccccccccCcccccCCC-------CCcchhhHHHHHHHHHHHhCC
Q 016009 258 SSKNLLLDLEFEAHVADFGIAKFLKP--DSSNWTEFAGTYGYVAPELAYTMK-------ITEKCDVYSFGVLALEVIKGK 328 (397)
Q Consensus 258 k~~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~-------~~~~~Dv~s~G~~l~el~tg~ 328 (397)
+++|.++|....+|++|||+...... .........-..-|.|||.+.... .+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999887642 111122233456799999987641 467899999999999999999
Q ss_pred CCCCccccccccccccccccccccC-CC-CCCCCcc-hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 016009 329 HPRDFLSSISSSFLNTDIELDEMLD-PR-LPAPSRS-VQEKLRSIVEVVFSCLNESPESRPTMKIVSQQLQ 396 (397)
Q Consensus 329 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~Le 396 (397)
.||+........ .+....+.+ .. ...|.-. ..+....+..++..||..+|++||++++|-..++
T Consensus 156 ~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 156 GPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred CccccccccCCh----HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 998753322111 001111111 11 0111111 1133346889999999999999999999987664
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=5.6e-22 Score=167.91 Aligned_cols=144 Identities=21% Similarity=0.217 Sum_probs=111.1
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcch----------------------hcHHHHHHHHHHHHhccCCce
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQI----------------------VDKKEFLTEVEALTEIRHRNI 187 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~ni 187 (397)
...||+|++|.||+|...+|+.||||+++........ .....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4569999999999998778999999998764221000 001224578999999999987
Q ss_pred eeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceeccCCCCcEEeCC
Q 016009 188 VKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHRDISSKNLLLDL 266 (397)
Q Consensus 188 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~ 266 (397)
.....+... ..++||||++++++....... ..++..+...++.+++.++.++|+ . +++||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence 554444333 248999999988654332221 247788899999999999999999 7 999999999999998
Q ss_pred CCcEEEeeeccccccC
Q 016009 267 EFEAHVADFGIAKFLK 282 (397)
Q Consensus 267 ~~~~kl~Dfg~~~~~~ 282 (397)
++.++|+|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 8899999999998654
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=6.4e-22 Score=164.90 Aligned_cols=185 Identities=12% Similarity=0.062 Sum_probs=137.3
Q ss_pred CCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeEEEEec
Q 016009 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
....|++|+||+||.+.. .+.+++.+.+..............+.+|+++|+++. |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 456799999999998766 677888777764222111112235789999999995 5889999886 3469999999
Q ss_pred cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccC-CCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 208 KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDI-SSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 208 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
.|.+|...+.. ....++.+++++|.++|+. +|+|||| ||+||+++.++.++|+|||++........
T Consensus 81 ~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 81 AGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred cCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 99998754321 1135778999999999999 9999999 79999999999999999999986554332
Q ss_pred C-----c--------ccccccccccCcccccCC-CCC-cchhhHHHHHHHHHHHhCCCCC
Q 016009 287 N-----W--------TEFAGTYGYVAPELAYTM-KIT-EKCDVYSFGVLALEVIKGKHPR 331 (397)
Q Consensus 287 ~-----~--------~~~~g~~~y~aPE~~~~~-~~~-~~~Dv~s~G~~l~el~tg~~p~ 331 (397)
. . .-...++.|++|+...-. ..+ ...+.++-|.-+|.++|++.+.
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 1 0 011246677777654322 233 4678899999999999999884
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.87 E-value=3.1e-23 Score=193.24 Aligned_cols=227 Identities=26% Similarity=0.336 Sum_probs=178.6
Q ss_pred cccccCcEEEEEEE----eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeEEEEe
Q 016009 132 CIGNGGHGSVYRAE----LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 132 ~lg~G~~g~vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
++|+|.||.|+.++ ...|.-+|.|++++....... +.....|..++..++ ||.++++.-.++.+...+++++|
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~--~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD--RTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccc--ccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence 37899999999873 234777899988764332221 225567888999996 99999999999999999999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
..+|.|...+.... .+++.........++-+++++|+. +++|+|+|++||+++.+|++++.|||+++..-....
T Consensus 79 ~rgg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred cccchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 99999998887654 366667777788899999999999 999999999999999999999999999986543322
Q ss_pred CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHH
Q 016009 287 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEK 366 (397)
Q Consensus 287 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (397)
.+||..|||||++. .....+|.||||++++||+||..||.. +....+....+..| .+.
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~~~~p----~~l 210 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAELEMP----REL 210 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhccCCc----hhh
Confidence 28999999999998 457789999999999999999999863 12233333233322 344
Q ss_pred HHHHHHHHHHccCCCCCCCCCH
Q 016009 367 LRSIVEVVFSCLNESPESRPTM 388 (397)
Q Consensus 367 ~~~l~~l~~~cl~~~P~~RPt~ 388 (397)
.....+++..++..+|..|.-.
T Consensus 211 ~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 211 SAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hHHHHHHHHHHHhhCHHHHhcc
Confidence 4556777778888899888644
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.87 E-value=1.4e-21 Score=171.53 Aligned_cols=234 Identities=21% Similarity=0.287 Sum_probs=147.2
Q ss_pred CCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc----------CCceeeeEEEE--
Q 016009 128 DAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR----------HRNIVKLYGFC-- 194 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----------h~niv~~~~~~-- 194 (397)
.....||.|+++.||.+... +|+++|+|++.... .......+++.+|.-....+. |-.++-.++..
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 34567999999999999765 68999999987644 333344667777765554432 21222222211
Q ss_pred -------ecC---C-----eeeEEEEeccCCCHHHhhcc---ccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceec
Q 016009 195 -------SHA---R-----HSFLVYEFLKRGSLAAILSS---DAA-AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHR 255 (397)
Q Consensus 195 -------~~~---~-----~~~lv~e~~~~g~L~~~l~~---~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~ 255 (397)
... . ..+++|+-+ .++|.+++.. ... ...+....++.+..|+++.+++||+. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 111 1 235677766 5688887642 111 12244556678889999999999999 99999
Q ss_pred cCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccccccccccCcccccC--------CCCCcchhhHHHHHHHHHHHhC
Q 016009 256 DISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYT--------MKITEKCDVYSFGVLALEVIKG 327 (397)
Q Consensus 256 dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~s~G~~l~el~tg 327 (397)
||+|+|++++.+|.+.|+||+....... .......+..|.+||.... ..++.+.|.|++|+++|.|++|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~---~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGT---RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTE---EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCc---eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 9999999999999999999987654322 1111344577899997643 2478899999999999999999
Q ss_pred CCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCC
Q 016009 328 KHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESR 385 (397)
Q Consensus 328 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R 385 (397)
+.||+.......... .+ ..+. +.+..+.+||..+|+.||++|
T Consensus 247 ~lPf~~~~~~~~~~~------------~f---~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW------------DF---SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG------------GG---TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc------------cc---hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999985433211100 11 1122 455668899999999999988
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.84 E-value=3.7e-20 Score=157.46 Aligned_cols=138 Identities=20% Similarity=0.267 Sum_probs=105.5
Q ss_pred CCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-----cCCceeeeEEEEecCC---
Q 016009 127 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-----RHRNIVKLYGFCSHAR--- 198 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~--- 198 (397)
++....||+|+||.||. .-.++. .+||++..... ...+.+.+|+++++.+ .||||++++|+++++.
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGD----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcC-eEEEEEecccc----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 34467899999999996 333444 47998764221 1356789999999999 5799999999998874
Q ss_pred eee-EEEEe--ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCceeccCCCCcEEeCC----CCcE
Q 016009 199 HSF-LVYEF--LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADAL-SYLHHDCFPPIVHRDISSKNLLLDL----EFEA 270 (397)
Q Consensus 199 ~~~-lv~e~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~Lh~~~~~~ivH~dlk~~Nill~~----~~~~ 270 (397)
..+ +|+|| +.+|+|.+++.+. .+++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.+
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcE
Confidence 333 78999 5589999999653 25544 35677888777 999999 9999999999999974 3479
Q ss_pred EEee-ecccc
Q 016009 271 HVAD-FGIAK 279 (397)
Q Consensus 271 kl~D-fg~~~ 279 (397)
+|+| ||...
T Consensus 149 ~LiDg~G~~~ 158 (210)
T PRK10345 149 VVCDNIGEST 158 (210)
T ss_pred EEEECCCCcc
Confidence 9999 55443
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=8.4e-20 Score=181.89 Aligned_cols=202 Identities=22% Similarity=0.238 Sum_probs=158.2
Q ss_pred HHHHHhcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCC
Q 016009 119 EIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHAR 198 (397)
Q Consensus 119 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 198 (397)
+.+.....|.+.+.+|+|+||+||+|...+|+.||+|+-+.+.. .+.+-..+++..++ ... -+-|..+...+.-.+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~-WEfYI~~q~~~RLk-~~~--~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP-WEFYICLQVMERLK-PQM--LPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc-eeeeehHHHHHhhc-hhh--hcchHHHHHHHccCC
Confidence 33444567888899999999999999888899999998665333 22222333333333 111 123344444445567
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeC-------CCCcEE
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLD-------LEFEAH 271 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-------~~~~~k 271 (397)
..+||+||.+.|+|.+++... +.++|..+..++.|+++.+..||.. +|||+||||+|.+|. ++.-++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~---~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTN---KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhccC---CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceE
Confidence 789999999999999999743 4599999999999999999999999 999999999999994 234589
Q ss_pred EeeeccccccC--CCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 016009 272 VADFGIAKFLK--PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330 (397)
Q Consensus 272 l~Dfg~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p 330 (397)
|+|||.+.-+. ++...+...++|-.+-.+|+..|..++.+.|.|.++.+++-|+.|+.-
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99999986543 234456677889999999999999999999999999999999999864
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=1.7e-19 Score=157.24 Aligned_cols=147 Identities=21% Similarity=0.231 Sum_probs=112.3
Q ss_pred cCCCCCccccccCcEEEEEEE--eCCCCEEEEEecCCCCCCcc------------------h--hcHHHHHHHHHHHHhc
Q 016009 125 NDFDAQYCIGNGGHGSVYRAE--LPSGQVVAIKKFHSPLPSDQ------------------I--VDKKEFLTEVEALTEI 182 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~--~~~~~~vavK~~~~~~~~~~------------------~--~~~~~~~~e~~~l~~l 182 (397)
..|.+.+.||+|++|.||+|. ..+|+.||+|+++....... . .....+..|++.++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347778899999999999997 56899999999875321100 0 0113467899999999
Q ss_pred cCC--ceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-ceeccCCC
Q 016009 183 RHR--NIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPP-IVHRDISS 259 (397)
Q Consensus 183 ~h~--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-ivH~dlk~ 259 (397)
.+. .+.+++++ ...++||||+++++|....... ..+...+...++.|++.++++||+. + ++|+||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 753 34444543 2358999999998887664322 2355667789999999999999999 8 99999999
Q ss_pred CcEEeCCCCcEEEeeeccccccC
Q 016009 260 KNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 260 ~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
+||+++ +++++|+|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999987543
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=3.5e-19 Score=153.82 Aligned_cols=138 Identities=17% Similarity=0.324 Sum_probs=114.6
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcc----hhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEe
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQ----IVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
+.||+|++|.||+|.. +|..+++|+......... ......+.+|++++..++|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4699999999999987 677899998654222111 11234678899999999999988877777777888999999
Q ss_pred ccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 207 LKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 207 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
++|++|.+++.... + .+..++.+++.+|.++|+. +++|+|++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999985421 2 7889999999999999998 999999999999999 78999999998864
No 425
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.81 E-value=5.6e-19 Score=150.78 Aligned_cols=149 Identities=19% Similarity=0.198 Sum_probs=113.9
Q ss_pred HHHHHHhcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcch------------------hcHHHHHHHHHHH
Q 016009 118 DEIVRATNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQI------------------VDKKEFLTEVEAL 179 (397)
Q Consensus 118 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~------------------~~~~~~~~e~~~l 179 (397)
.++.+....|...+.||+|+||.||++..++|+.||||++......... .....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 3445555457778899999999999998888999999987643211000 0122367889999
Q ss_pred HhccCC--ceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccC
Q 016009 180 TEIRHR--NIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDI 257 (397)
Q Consensus 180 ~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl 257 (397)
..+.|+ .++..++. ...++||||+++++|.+.... .....++.+++.++.++|+. +++|+||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 999887 44444442 345899999999999765421 23467889999999999998 9999999
Q ss_pred CCCcEEeCCCCcEEEeeeccccccC
Q 016009 258 SSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 258 k~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
+|+||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999986544
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.79 E-value=2.1e-20 Score=171.22 Aligned_cols=174 Identities=22% Similarity=0.378 Sum_probs=134.5
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
..|+.|++|...+|.+|+.........++.....++.|++.|+.| + +.+|+|+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999877766788999999999999999999 5 8899999999999999999999999998
Q ss_pred cccCCCC------CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCccccccccccccccccccc
Q 016009 279 KFLKPDS------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSISSSFLNTDIELDEM 351 (397)
Q Consensus 279 ~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 351 (397)
....... ...+...||..||+||.+.+..|+.|+||||||++|+|+++ =..+++- .....++
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-----------~~t~~d~ 472 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-----------IATLTDI 472 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------HHhhhhh
Confidence 7665433 23456789999999999999999999999999999999998 2222210 1122333
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 016009 352 LDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392 (397)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl 392 (397)
-|..++ +....+++. =..|+.+++.+.|.+||++.++.
T Consensus 473 r~g~ip--~~~~~d~p~-e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 473 RDGIIP--PEFLQDYPE-EYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hcCCCC--hHHhhcCcH-HHHHHHHhcCCCcccCchHHHHh
Confidence 333333 111122222 23677799999999999655543
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.79 E-value=1.3e-18 Score=148.91 Aligned_cols=134 Identities=17% Similarity=0.347 Sum_probs=107.9
Q ss_pred cccccCcEEEEEEEeCCCCEEEEEecCCCCCCc----chhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEec
Q 016009 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSD----QIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
.||+|++|.||+|.. +|..+++|......... .......+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 67889999865322111 1122466788999999999887665555566667779999999
Q ss_pred cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 208 KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 208 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+|++|.+.+..... .++.+++.+|.+||+. +++|+|++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988754210 7899999999999998 999999999999999 88999999999875
No 428
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=5.8e-19 Score=155.96 Aligned_cols=195 Identities=25% Similarity=0.351 Sum_probs=135.0
Q ss_pred cCCceeeeEEEEec---------------------------CCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHH
Q 016009 183 RHRNIVKLYGFCSH---------------------------ARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIK 235 (397)
Q Consensus 183 ~h~niv~~~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 235 (397)
+|||||++.++|.+ +..+|+||.-++. +|..++..+. .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 59999999887632 3456899987755 8888886543 55666777899
Q ss_pred HHHHHHHHHHhCCCCCceeccCCCCcEEe--CCCC--cEEEeeeccccccCCC------CCCcccccccccccCcccccC
Q 016009 236 GVADALSYLHHDCFPPIVHRDISSKNLLL--DLEF--EAHVADFGIAKFLKPD------SSNWTEFAGTYGYVAPELAYT 305 (397)
Q Consensus 236 ~i~~~l~~Lh~~~~~~ivH~dlk~~Nill--~~~~--~~kl~Dfg~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~ 305 (397)
|+++|+.|||.+ +|.|||+|++|||+ |+|+ .+.|+|||.+---... .+......|...-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999999 4444 4789999976421110 111233467788999998764
Q ss_pred CC------CCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccC
Q 016009 306 MK------ITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLN 379 (397)
Q Consensus 306 ~~------~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 379 (397)
.+ --.|+|.|+.|.+.||+++...||-.-..+--.. ...-...++.-+ ...+..+.+++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~-------r~Yqe~qLPalp---~~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT-------RTYQESQLPALP---SRVPPVARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech-------hhhhhhhCCCCc---ccCChHHHHHHHHHhc
Confidence 32 1258999999999999999999974311111000 001111122111 1223447889999999
Q ss_pred CCCCCCCCHHHHHHHh
Q 016009 380 ESPESRPTMKIVSQQL 395 (397)
Q Consensus 380 ~~P~~RPt~~~vl~~L 395 (397)
.||.+|++..-....|
T Consensus 496 r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVL 511 (598)
T ss_pred CCccccCCccHHHhHH
Confidence 9999999876555444
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.79 E-value=1.6e-18 Score=169.74 Aligned_cols=142 Identities=18% Similarity=0.298 Sum_probs=113.0
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEec-CCCCCCc---chhcHHHHHHHHHHHHhccCCceeeeEEEEecCCe
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKF-HSPLPSD---QIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARH 199 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~-~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 199 (397)
...|...+.||+|+||+||+|.+.+.. +++|+. ....... .....+.+.+|+++++.++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344566788999999999999875443 444432 2211111 11224568899999999999999988888877778
Q ss_pred eeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 200 SFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 200 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.++||||+++++|.+++. ....++.+++++|.+||+. +++||||||+||++ +++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999998874 3467899999999999998 99999999999999 67899999999997
Q ss_pred cc
Q 016009 280 FL 281 (397)
Q Consensus 280 ~~ 281 (397)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.74 E-value=1.4e-18 Score=170.54 Aligned_cols=207 Identities=24% Similarity=0.315 Sum_probs=137.7
Q ss_pred hcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 202 (397)
.++|+.++.+..|++|.||.++++ +.+.+|.| +++ + .-+++- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNk----q-----~lilRn--ilt~a~npfvv-------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INK----Q-----NLILRN--ILTFAGNPFVV-------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccc----c-----chhhhc--cccccCCccee--------------
Confidence 458899999999999999999776 45677874 332 1 111110 22223333333
Q ss_pred EEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 203 VYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 203 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
|+-...+...+ .++.. ++.+++|||+. +|+|||+||+|.+++.-|++|++|||+++...
T Consensus 136 -------gDc~tllk~~g---~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 -------GDCATLLKNIG---PLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred -------chhhhhcccCC---CCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 44444443322 23222 27789999998 99999999999999999999999999987532
Q ss_pred CCCC---------------CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccc
Q 016009 283 PDSS---------------NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIE 347 (397)
Q Consensus 283 ~~~~---------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 347 (397)
.... .....+||+.|+|||++....|...+|+|++|+++||.+.|..||....+.. -
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee--------l 266 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--------L 266 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH--------H
Confidence 1100 0123589999999999999999999999999999999999999986442210 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCC
Q 016009 348 LDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRP 386 (397)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 386 (397)
+..++...+.-+.. ......+..+++.+.++.+|.+|-
T Consensus 267 fg~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 267 FGQVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred Hhhhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 01111000000000 112223477888899999999994
No 431
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.73 E-value=5.4e-17 Score=132.26 Aligned_cols=134 Identities=18% Similarity=0.201 Sum_probs=113.2
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccC--CceeeeEEEEecCCeeeEEEEec
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH--RNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| .++++++++....+..+++|||+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 4679999999999998755 7899998764221 4578899999999976 58999999888888899999999
Q ss_pred cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 208 KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 208 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+++.+..+ +......++.+++++++++|.....+++|+|++|+||++++++.+++.|||.+..
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 98877543 4566778899999999999996444799999999999999989999999998864
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.72 E-value=6.6e-17 Score=136.83 Aligned_cols=140 Identities=22% Similarity=0.233 Sum_probs=99.3
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcH--------------------HHHHHHHHHHHhccCCc--e
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDK--------------------KEFLTEVEALTEIRHRN--I 187 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~--------------------~~~~~e~~~l~~l~h~n--i 187 (397)
.+.||+|+||.||+|...+|+.||||+++........... .....|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4569999999999998878999999998653221111000 01135666666665433 4
Q ss_pred eeeEEEEecCCeeeEEEEeccCCCHHHh-hccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceeccCCCCcEEeC
Q 016009 188 VKLYGFCSHARHSFLVYEFLKRGSLAAI-LSSDAAAQELGWSQRMNVIKGVADALSYLHH-DCFPPIVHRDISSKNLLLD 265 (397)
Q Consensus 188 v~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~ 265 (397)
.+.+++ ...++||||++++++... +.... .. .+...++.+++.++.++|. . +++|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444443 245899999999554321 11110 11 5678899999999999999 7 999999999999999
Q ss_pred CCCcEEEeeeccccccC
Q 016009 266 LEFEAHVADFGIAKFLK 282 (397)
Q Consensus 266 ~~~~~kl~Dfg~~~~~~ 282 (397)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999987543
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.70 E-value=1.6e-16 Score=138.88 Aligned_cols=140 Identities=15% Similarity=0.257 Sum_probs=106.5
Q ss_pred Ccccc-ccCcEEEEEEEeCCCCEEEEEecCCCCC-----C----cchhcHHHHHHHHHHHHhccCCce--eeeEEEEecC
Q 016009 130 QYCIG-NGGHGSVYRAELPSGQVVAIKKFHSPLP-----S----DQIVDKKEFLTEVEALTEIRHRNI--VKLYGFCSHA 197 (397)
Q Consensus 130 ~~~lg-~G~~g~vy~~~~~~~~~vavK~~~~~~~-----~----~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~ 197 (397)
...|| .|+.|+||++... +..+++|.+..... . ........+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8999999999874 67899988753110 0 011234668899999999998774 6777765433
Q ss_pred C----eeeEEEEeccC-CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEE
Q 016009 198 R----HSFLVYEFLKR-GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 198 ~----~~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
. ..++||||++| .+|.+++... +++.. .+.+++.++.+||+. ||+|+||||.|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6999887542 24443 356899999999999 9999999999999999999999
Q ss_pred eeecccccc
Q 016009 273 ADFGIAKFL 281 (397)
Q Consensus 273 ~Dfg~~~~~ 281 (397)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999988764
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68 E-value=4.7e-18 Score=166.03 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=185.2
Q ss_pred CCCCCccccccCcEEEEEEEeC--CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeE
Q 016009 126 DFDAQYCIGNGGHGSVYRAELP--SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 126 ~~~~~~~lg~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 202 (397)
.|...+.||+|.|+.|-..... ....+|+|.+.... ...........|..+-+.+. |+|++.+++...+.+..++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 4666777999999999887553 34456666665432 11222344556777777776 9999999999999999999
Q ss_pred EEEeccCCCHHHhh-ccccccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCceeccCCCCcEEeCCCC-cEEEeeecccc
Q 016009 203 VYEFLKRGSLAAIL-SSDAAAQELGWSQRMNVIKGVADALSYLH-HDCFPPIVHRDISSKNLLLDLEF-EAHVADFGIAK 279 (397)
Q Consensus 203 v~e~~~~g~L~~~l-~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~ 279 (397)
..||..++++.+-+ .... ...+....-..+.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||++.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999999888 4332 13455666788999999999999 76 999999999999999999 99999999998
Q ss_pred ccCC-CCC--Ccccccc-cccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCC
Q 016009 280 FLKP-DSS--NWTEFAG-TYGYVAPELAYTM-KITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDP 354 (397)
Q Consensus 280 ~~~~-~~~--~~~~~~g-~~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
.+.. ... .....+| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++........+... ...
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~-------~~~ 246 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSW-------KSN 246 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceee-------ccc
Confidence 8765 322 2344677 9999999998874 45678999999999999999999987655433221111 111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 016009 355 RLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVS 392 (397)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl 392 (397)
........+........+++.+++..+|..|.+.+++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 00000111122233466777789999999999988764
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=4.2e-16 Score=134.91 Aligned_cols=201 Identities=21% Similarity=0.363 Sum_probs=139.9
Q ss_pred HHHHhccCCceeeeEEEEec-----CCeeeEEEEeccCCCHHHhhccccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 016009 177 EALTEIRHRNIVKLYGFCSH-----ARHSFLVYEFLKRGSLAAILSSDAA-AQELGWSQRMNVIKGVADALSYLHHDCFP 250 (397)
Q Consensus 177 ~~l~~l~h~niv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~ 250 (397)
.-|-++-|.|||++..|+.+ .....++.|||..|++..+|++... ...+......+|+.||..||.|||+ |.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 34555679999999998854 3456889999999999999976542 3457778888999999999999999 677
Q ss_pred CceeccCCCCcEEeCCCCcEEEeeeccccccCCC-----CCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHH
Q 016009 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPD-----SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 325 (397)
Q Consensus 251 ~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~ 325 (397)
+++|+++..+.|++..++-+|++-- ........ ........+-++|.+||+-...+.+..+|||+||+..+||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~-ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSV-APDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEeccc-CccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 9999999999999999998887432 11111110 00112234678999999988888889999999999999998
Q ss_pred hCCCC-CCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 326 KGKHP-RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 326 tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
.|..- .+..+. ...++.....+- ...+. .-..++..|++..|..||+|++++.+
T Consensus 277 ilEiq~tnseS~-----~~~ee~ia~~i~----~len~------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 277 ILEIQSTNSESK-----VEVEENIANVII----GLENG------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HheeccCCCcce-----eehhhhhhhhee----eccCc------cccCcCcccccCCCCCCcchhhhhcC
Confidence 87543 111111 110111111000 00000 02346678999999999999998764
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.59 E-value=9.2e-15 Score=138.71 Aligned_cols=146 Identities=21% Similarity=0.262 Sum_probs=101.3
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhc------------------------------------HHHHH
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVD------------------------------------KKEFL 173 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~------------------------------------~~~~~ 173 (397)
.+.||+|++|.||+|++.+|+.||||+.+......-..+ .-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 357999999999999999999999999865321110000 01245
Q ss_pred HHHHHHHhcc----CCceeeeEEEE-ecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHH-HHHHHHhC
Q 016009 174 TEVEALTEIR----HRNIVKLYGFC-SHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVAD-ALSYLHHD 247 (397)
Q Consensus 174 ~e~~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~Lh~~ 247 (397)
.|+..+.+++ |.+-+.+-..+ ......+|||||++|++|.+....... .. .+..++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhC
Confidence 5666555552 22223332233 233457999999999999887643211 12 23456666666 46788987
Q ss_pred CCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 248 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+++|+|++|.||+++++++++++|||++..+..
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999999987653
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.48 E-value=2.9e-13 Score=130.04 Aligned_cols=147 Identities=17% Similarity=0.229 Sum_probs=93.4
Q ss_pred cCCCCCccccccCcEEEEEEEeCC-CCEEEEEecCCCCCCc-------------------------ch-----hcHH---
Q 016009 125 NDFDAQYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLPSD-------------------------QI-----VDKK--- 170 (397)
Q Consensus 125 ~~~~~~~~lg~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~-------------------------~~-----~~~~--- 170 (397)
.+|+. +.||+|++|.||+|.+++ |+.||||+.+...... .. .-.+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35665 689999999999999887 9999999997542110 00 0011
Q ss_pred ---HHHHHHHHHHhcc----CCceeeeEEEEec-CCeeeEEEEeccCCCHHHhh--cccc-ccCCCCHHHHHHHHHHHHH
Q 016009 171 ---EFLTEVEALTEIR----HRNIVKLYGFCSH-ARHSFLVYEFLKRGSLAAIL--SSDA-AAQELGWSQRMNVIKGVAD 239 (397)
Q Consensus 171 ---~~~~e~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~-~~~~l~~~~~~~i~~~i~~ 239 (397)
++..|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.+.- ...+ ....+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 2344444444442 3333333333322 35678999999999998742 2211 00112222223333333
Q ss_pred HHHHHHhCCCCCceeccCCCCcEEeCCCC----cEEEeeeccccccC
Q 016009 240 ALSYLHHDCFPPIVHRDISSKNLLLDLEF----EAHVADFGIAKFLK 282 (397)
Q Consensus 240 ~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~~~~ 282 (397)
... |++|+|++|.||+++.++ ++++.|||+...++
T Consensus 277 -----f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 -----FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -----HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 345 999999999999999988 99999999987654
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=7.9e-14 Score=130.71 Aligned_cols=247 Identities=25% Similarity=0.283 Sum_probs=176.5
Q ss_pred CCCCccccc--cCcEEEEEEEe---CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCCee
Q 016009 127 FDAQYCIGN--GGHGSVYRAEL---PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHARHS 200 (397)
Q Consensus 127 ~~~~~~lg~--G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 200 (397)
|.....+|. |.+|.+|.+.. .++..+|+|+-+...... .....=.+|+...+.+ .|+|.++....+...+..
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p--~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPP--LDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCc--cccccccchhhcccccCccccccccCcccccCCcc
Confidence 455677999 99999999965 468889999854433211 1122234566666666 499999988889999999
Q ss_pred eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCceeccCCCCcEEeCCC-CcEEEeee
Q 016009 201 FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVAD----ALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADF 275 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Df 275 (397)
++-.|++. .+|..+-+.... .++....+....+... |+.++|.. .++|-|+||.||++..+ ...+++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 99999885 688877765432 3566777777777777 99999998 99999999999999999 78999999
Q ss_pred ccccccCCCCCCc-----ccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCcccccccccccccccccc
Q 016009 276 GIAKFLKPDSSNW-----TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDE 350 (397)
Q Consensus 276 g~~~~~~~~~~~~-----~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 350 (397)
|+...+....-.. ....+...|++||...+ -++..+|+|++|.+.++..+|..+.... +.........
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g------~~~~W~~~r~ 340 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVG------KNSSWSQLRQ 340 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCC------CCCCcccccc
Confidence 9998776544221 12257788999998765 4688899999999999999987764311 0010111111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 016009 351 MLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQ 393 (397)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~ 393 (397)
+. .+.+....-..++...+..+++.+|..|++.+.+..
T Consensus 341 ~~-----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 341 GY-----IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cc-----CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11 111122222334556888999999999999887764
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.45 E-value=5.8e-13 Score=110.75 Aligned_cols=130 Identities=21% Similarity=0.187 Sum_probs=95.2
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCcee-eeEEEEecCCeeeEEEEeccC
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIV-KLYGFCSHARHSFLVYEFLKR 209 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~ 209 (397)
+.++.|.++.||++... +..+++|....... ....+..|+.+++.+.+.+++ +++.+. ....++||||++|
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G 75 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG 75 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence 45888999999999874 77899998754221 123467899999998655544 444443 2345899999999
Q ss_pred CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 210 GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDC--FPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 210 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
.++.+.- . ....++.+++++|+.||+.. ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Ccccccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 8876430 0 11345678999999999983 12359999999999999 66899999998763
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.43 E-value=1.5e-12 Score=123.47 Aligned_cols=169 Identities=18% Similarity=0.236 Sum_probs=125.6
Q ss_pred EeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCC
Q 016009 145 ELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQE 224 (397)
Q Consensus 145 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~ 224 (397)
+..++.+|.|...+.... .......+-++.|+.++||||++++..++..+..|||+|-+. .|..++.+
T Consensus 33 ~k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------ 100 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------ 100 (690)
T ss_pred eeccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------
Confidence 445788888888765222 123556677889999999999999999999999999999773 56666643
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccccccccccCccccc
Q 016009 225 LGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY 304 (397)
Q Consensus 225 l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 304 (397)
++.......+.||+.||.|||+.| +++|++|....|++++.|+.||++|.++..............--..|..|+.+.
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID 178 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcC
Confidence 334566678899999999999775 899999999999999999999999988764332221111112223456666543
Q ss_pred CCCCCcchhhHHHHHHHHHHHhCCC
Q 016009 305 TMKITEKCDVYSFGVLALEVIKGKH 329 (397)
Q Consensus 305 ~~~~~~~~Dv~s~G~~l~el~tg~~ 329 (397)
... -..|.|-||++++|++.|..
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCccc
Confidence 322 34699999999999999943
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.42 E-value=4.1e-12 Score=106.23 Aligned_cols=139 Identities=22% Similarity=0.236 Sum_probs=98.4
Q ss_pred ccccccCcEEEEEEEeCC-------CCEEEEEecCCCCCCc---------c---------hhcHHHH----HHHHHHHHh
Q 016009 131 YCIGNGGHGSVYRAELPS-------GQVVAIKKFHSPLPSD---------Q---------IVDKKEF----LTEVEALTE 181 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~~---------~---------~~~~~~~----~~e~~~l~~ 181 (397)
..||.|.-+.||.|...+ +..+|||+.+.....- . ....+.+ .+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996543 4789999875322100 0 0012233 389999999
Q ss_pred ccC--CceeeeEEEEecCCeeeEEEEeccCCCHHH-hhccccccCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCceeccC
Q 016009 182 IRH--RNIVKLYGFCSHARHSFLVYEFLKRGSLAA-ILSSDAAAQELGWSQRMNVIKGVADALSYL-HHDCFPPIVHRDI 257 (397)
Q Consensus 182 l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~ivH~dl 257 (397)
+.. -++..++++ ..-++||||+.++.+.. .+.+ ..++..+...+..+++.+|..+ |.. +++|+||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 953 466667764 45689999997754422 2221 1244456677889999999999 777 9999999
Q ss_pred CCCcEEeCCCCcEEEeeecccccc
Q 016009 258 SSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 258 k~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
++.||+++ ++.+.|+|||.+...
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeC
Confidence 99999997 467999999988644
No 442
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=2.4e-11 Score=98.11 Aligned_cols=134 Identities=19% Similarity=0.320 Sum_probs=100.2
Q ss_pred cccccCcEEEEEEEeCCCCEEEEEec-CCCCCCc---chhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEec
Q 016009 132 CIGNGGHGSVYRAELPSGQVVAIKKF-HSPLPSD---QIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~~~vavK~~-~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 207 (397)
.+++|+-+.+|.+.+.+ .++++|.- .+..... +......-.+|+.++.+++--.|.-..=+..+.+...++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 47899999999997744 34666642 2222211 1112345678999999997655555555566777888999999
Q ss_pred cCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 208 KRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 208 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
+|-.|.+.+... ...++..+-.-+.-||.. +|+|+||.++||++..+. +.++|||++.+
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999898654 245677777788889999 999999999999997765 99999999975
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.32 E-value=2.7e-11 Score=105.30 Aligned_cols=143 Identities=20% Similarity=0.259 Sum_probs=109.2
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccC--CceeeeEEEEecCC---eeeEEEE
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH--RNIVKLYGFCSHAR---HSFLVYE 205 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~---~~~lv~e 205 (397)
+.|+.|..+.+|++...+|+.+++|........ .....+..|.++++.+++ .++.+++.+..... ..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 458899999999998877789999987643221 124568899999999965 44677787776542 5689999
Q ss_pred eccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 016009 206 FLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDC------------------------------------- 248 (397)
Q Consensus 206 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------------------------------------- 248 (397)
|++|.++.+.+.. ..++..++..++.+++++|..||+..
T Consensus 81 ~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 9999988776532 23667777788888888888888531
Q ss_pred ----------------CCCceeccCCCCcEEeCC--CCcEEEeeeccccc
Q 016009 249 ----------------FPPIVHRDISSKNLLLDL--EFEAHVADFGIAKF 280 (397)
Q Consensus 249 ----------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~ 280 (397)
...++|+|+.+.||++++ ++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 135799999999999998 66789999988763
No 444
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.30 E-value=8.8e-11 Score=94.42 Aligned_cols=148 Identities=21% Similarity=0.270 Sum_probs=105.5
Q ss_pred CCccccccCcEEEEEEEeCCCCEEEEEecCC-CCC---CcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEE
Q 016009 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHS-PLP---SDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~-~~~---~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 204 (397)
....+-+|+-+.|+++.+ .|+...||.-.. ... -++...++...+|++.|.+++--.|.-..=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456788999999999988 577777765321 111 112223566789999999986545444444555666667999
Q ss_pred EeccC-CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC---cEEEeeeccccc
Q 016009 205 EFLKR-GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF---EAHVADFGIAKF 280 (397)
Q Consensus 205 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~ 280 (397)
||++| -++.+++...... +.........+..|-+.+.-||.+ +++|+||.++||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~-~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED-ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccC-cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 4777777654332 222233378888999999999999 999999999999996654 358999999865
Q ss_pred c
Q 016009 281 L 281 (397)
Q Consensus 281 ~ 281 (397)
.
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 3
No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=2.7e-12 Score=120.53 Aligned_cols=248 Identities=21% Similarity=0.207 Sum_probs=172.2
Q ss_pred HHhcCCCCCccccccCcEEEEEEEe--CCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEEecCC
Q 016009 122 RATNDFDAQYCIGNGGHGSVYRAEL--PSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFCSHAR 198 (397)
Q Consensus 122 ~~~~~~~~~~~lg~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 198 (397)
..+.+|..+..||.|.|+.|++... .++..+++|.+....... .+...-+.|+.+...+ .|.++++....+...+
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~--~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF--ASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch--HhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3455788888999999999999843 467889999876533221 1222234566666666 5888888877777777
Q ss_pred eeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC-CcEEEeeecc
Q 016009 199 HSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE-FEAHVADFGI 277 (397)
Q Consensus 199 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 277 (397)
..|+=-||+.++++.....- ...++...++++..+++.++.++|+. .++|+|++|+||++..+ +.-+++|||.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred cccCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 77899999999998776622 23467788899999999999999988 99999999999999876 7889999998
Q ss_pred ccccCCCCCCccccccccccc--CcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCC
Q 016009 278 AKFLKPDSSNWTEFAGTYGYV--APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPR 355 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
...+.... ......-++. +++......+..+.|+||||.-+.|.++|..--.... ....+....
T Consensus 414 ~t~~~~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-----------~~~~i~~~~ 479 (524)
T KOG0601|consen 414 WTRLAFSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-----------QSLTIRSGD 479 (524)
T ss_pred ccccceec---ccccccccccccchhhccccccccccccccccccccccccCcccCcccc-----------cceeeeccc
Confidence 86422211 1112233344 4555555667889999999999999999875421110 111122222
Q ss_pred CCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 016009 356 LPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQL 395 (397)
Q Consensus 356 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~L 395 (397)
.+.... ....+..+...+..+++..||.+.+...+.
T Consensus 480 ~p~~~~----~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 480 TPNLPG----LKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred ccCCCc----hHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 221111 114466677788999999999998876543
No 446
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.21 E-value=5.1e-10 Score=103.46 Aligned_cols=215 Identities=16% Similarity=0.194 Sum_probs=149.8
Q ss_pred cEEEEEEE-eCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEe----cCCeeeEEEEeccC-CC
Q 016009 138 HGSVYRAE-LPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCS----HARHSFLVYEFLKR-GS 211 (397)
Q Consensus 138 ~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~lv~e~~~~-g~ 211 (397)
-.+.|++. ..||..|+.|+++.... . .......-++.++++.|+|+|++..++. .+..+++||+|.++ ++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~-~---~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRD-Q---STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccc-c---CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 36789994 45899999999953211 1 1122345678999999999999998886 34578999999985 57
Q ss_pred HHHhhccccc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 212 LAAILSSDAA------------AQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 212 L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
|.+....... ....++..+|.++.|++.||.++|+. |+..+-|.+.+|+++.+.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEeccccee
Confidence 7666533211 12367789999999999999999999 99999999999999999999999998887
Q ss_pred ccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCccccccccccccccccccccCCCCCCC
Q 016009 280 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAP 359 (397)
Q Consensus 280 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (397)
.+..+.. |.+. --.+-|.=.||.+++.|.||..-...- .... ...+..
T Consensus 442 vl~~d~~--------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~-----d~~~-~s~~~~--------- 489 (655)
T KOG3741|consen 442 VLQEDPT--------------EPLE---SQQQNDLRDLGLLLLALATGTENSNRT-----DSTQ-SSHLTR--------- 489 (655)
T ss_pred eecCCCC--------------cchh---HHhhhhHHHHHHHHHHHhhcccccccc-----cchH-HHHHHH---------
Confidence 6654431 1111 134569999999999999996541100 0000 000010
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 360 SRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 360 ~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
-...+..++.+++......++++ -++++++.+
T Consensus 490 --I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 490 --ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred --hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 01234456777888888888876 577777655
No 447
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.19 E-value=1.7e-09 Score=97.68 Aligned_cols=253 Identities=17% Similarity=0.238 Sum_probs=152.4
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhc-cCCceeeeEEEE------ecC-Ceee
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEI-RHRNIVKLYGFC------SHA-RHSF 201 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~------~~~-~~~~ 201 (397)
.+.||+|+-+.+|..-.-. ..+.|+++.+.... .. +.+..|... .||-+-.-+.+= -+. ...-
T Consensus 16 gr~LgqGgea~ly~l~e~~--d~VAKIYh~Pppa~----~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 16 GRPLGQGGEADLYTLGEVR--DQVAKIYHAPPPAA----QA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CccccCCccceeeecchhh--chhheeecCCCchH----HH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 4569999999999652211 23556666533211 11 122333333 566443312211 112 2245
Q ss_pred EEEEeccCC-CHHHhhccc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecc
Q 016009 202 LVYEFLKRG-SLAAILSSD---AAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGI 277 (397)
Q Consensus 202 lv~e~~~~g-~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 277 (397)
++|..+.+. ....+++.. .......|+-.++.+..+|.+.+.||.. |.+-+|++++|+|+++++.+.|.|-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 677776654 233333221 1223478999999999999999999999 999999999999999999999998654
Q ss_pred ccccCCCCCCcccccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhC-CCCCCccccccccccccccc----
Q 016009 278 AKFLKPDSSNWTEFAGTYGYVAPELAY-----TMKITEKCDVYSFGVLALEVIKG-KHPRDFLSSISSSFLNTDIE---- 347 (397)
Q Consensus 278 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~tg-~~p~~~~~~~~~~~~~~~~~---- 347 (397)
-... .........+|...|++||.-. +-.-+..+|-|.+|+++++++.| ++||.........-...+..
T Consensus 164 fqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 164 FQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 3322 3344455678999999999654 33457789999999999999886 99987543221100000000
Q ss_pred -cc---cccCCCCCCCCc-chHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHHh
Q 016009 348 -LD---EMLDPRLPAPSR-SVQEKLRSIVEVVFSCLNE--SPESRPTMKIVSQQL 395 (397)
Q Consensus 348 -~~---~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~--~P~~RPt~~~vl~~L 395 (397)
.. +.-.+..+.|.. .+.-...++.-+..+|+.. ++.-|||++-.+..|
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl 297 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL 297 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence 00 000011111111 1112223455556678775 366899999888765
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.17 E-value=6.5e-12 Score=124.37 Aligned_cols=251 Identities=21% Similarity=0.262 Sum_probs=163.5
Q ss_pred HhcCCCCCccccccCcEEEEEEEeC-CCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeee
Q 016009 123 ATNDFDAQYCIGNGGHGSVYRAELP-SGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSF 201 (397)
Q Consensus 123 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 201 (397)
..+.+.+.+-+.+|.++.++.+.-. .|...+.|.... .......+.+....+-.++-..+||-+++..--+.-....+
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~-ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGL-APKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhcc-chhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 3456666777888999988877432 333333333221 11111111233333434444445666665554444556789
Q ss_pred EEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 202 LVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 202 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
|+++|..+++|...++... ..+..-....+..+..+++|||.. .+.|+|++|.|.+...++..+++|||.....
T Consensus 881 L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 9999999999999987655 244444555666788899999997 7899999999999999999999999832211
Q ss_pred C---------------------CCC----------CCcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 016009 282 K---------------------PDS----------SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 330 (397)
Q Consensus 282 ~---------------------~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p 330 (397)
. ... .......+|+.|.+||...+......+|+|+.|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 0 000 001234689999999999999999999999999999999999999
Q ss_pred CCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHH
Q 016009 331 RDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMK 389 (397)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~ 389 (397)
|+....-. ....+....++- .....+......+++...+..+|.+|-.+.
T Consensus 1035 ~na~tpq~--------~f~ni~~~~~~~-p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQQ--------IFENILNRDIPW-PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchhh--------hhhccccCCCCC-CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 87554321 112222222221 112223334567777788899999997664
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.10 E-value=3.5e-09 Score=93.69 Aligned_cols=139 Identities=22% Similarity=0.192 Sum_probs=98.5
Q ss_pred CcEEEEEEEeCCCCEEEEEecCCCCCCc---c----hhcHHHHHHHHHHHHhccCC--ceeeeEEEEec-----CCeeeE
Q 016009 137 GHGSVYRAELPSGQVVAIKKFHSPLPSD---Q----IVDKKEFLTEVEALTEIRHR--NIVKLYGFCSH-----ARHSFL 202 (397)
Q Consensus 137 ~~g~vy~~~~~~~~~vavK~~~~~~~~~---~----~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~-----~~~~~l 202 (397)
....|++..+ +|+.+.||......... . ......+.+|...+.++... ..+.++++... ....+|
T Consensus 34 ~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 34 EGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred CCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEE
Confidence 3344667766 67789999764322100 0 01122478899999888433 33445556543 235789
Q ss_pred EEEeccCC-CHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC-------CCcEEEee
Q 016009 203 VYEFLKRG-SLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL-------EFEAHVAD 274 (397)
Q Consensus 203 v~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-------~~~~kl~D 274 (397)
|+|++++. +|.+++..... .+.+...+..++.+++..+.-||.. |++|+|++++|||++. ++.+.++|
T Consensus 113 Vte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 113 ITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred EEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 99999986 89998853221 3355677789999999999999999 9999999999999975 46899999
Q ss_pred eccccc
Q 016009 275 FGIAKF 280 (397)
Q Consensus 275 fg~~~~ 280 (397)
|+.+..
T Consensus 189 l~r~~~ 194 (268)
T PRK15123 189 LHRAQI 194 (268)
T ss_pred CCcccc
Confidence 998853
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.08 E-value=1.4e-09 Score=90.78 Aligned_cols=129 Identities=25% Similarity=0.345 Sum_probs=83.0
Q ss_pred EEEEEEeCCCCEEEEEecCCCCCC----------------------cchhcHHHHHHHHHHHHhccCC--ceeeeEEEEe
Q 016009 140 SVYRAELPSGQVVAIKKFHSPLPS----------------------DQIVDKKEFLTEVEALTEIRHR--NIVKLYGFCS 195 (397)
Q Consensus 140 ~vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~ 195 (397)
.||.|...+|..+|+|..+..... ..........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389998889999999987542111 0111134467899999999755 566666553
Q ss_pred cCCeeeEEEEecc--CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHH-HHhCCCCCceeccCCCCcEEeCCCCcEEE
Q 016009 196 HARHSFLVYEFLK--RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSY-LHHDCFPPIVHRDISSKNLLLDLEFEAHV 272 (397)
Q Consensus 196 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 272 (397)
.-.+||||++ |..+..+.... ++......++.+++..+.. +|.. +++|+||.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 3479999998 65554433221 1123445677777776665 4676 99999999999999888 9999
Q ss_pred eeecccccc
Q 016009 273 ADFGIAKFL 281 (397)
Q Consensus 273 ~Dfg~~~~~ 281 (397)
+|||.+...
T Consensus 148 IDf~qav~~ 156 (188)
T PF01163_consen 148 IDFGQAVDS 156 (188)
T ss_dssp --GTTEEET
T ss_pred EecCcceec
Confidence 999987643
No 451
>PRK09902 hypothetical protein; Provisional
Probab=99.00 E-value=1.8e-08 Score=84.52 Aligned_cols=142 Identities=19% Similarity=0.180 Sum_probs=105.0
Q ss_pred ccccCcEEEEEEEeCCCCEEEEEecCCCCCCc--chhcHHHHHHHHHHHHhccC--CceeeeEEEEe-c----CCeeeEE
Q 016009 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSD--QIVDKKEFLTEVEALTEIRH--RNIVKLYGFCS-H----ARHSFLV 203 (397)
Q Consensus 133 lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~-~----~~~~~lv 203 (397)
-|+||.+.|++..+. |+.+-+|+-....... .......|.+|...|.++.. -.+.+.. ++. . ....+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 567888889998774 4579999865322211 13357889999999999953 3344544 332 1 1235799
Q ss_pred EEeccC-CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc--EEEeeeccccc
Q 016009 204 YEFLKR-GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE--AHVADFGIAKF 280 (397)
Q Consensus 204 ~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 280 (397)
+|-++| -+|.+++.+... .+.+..++..++.+++..++-||+. ++.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 589888865432 3567778889999999999999999 9999999999999986666 99999976653
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.93 E-value=1.2e-08 Score=87.66 Aligned_cols=137 Identities=23% Similarity=0.239 Sum_probs=94.8
Q ss_pred CCCccccccCcEEEEEEEeCCCCEEEEEecCCCCC------------------CcchhcHHHHHHHHHHHHhccCC--ce
Q 016009 128 DAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLP------------------SDQIVDKKEFLTEVEALTEIRHR--NI 187 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~~~~~e~~~l~~l~h~--ni 187 (397)
.+...||-|.-+.||.|..+.|.++|||.=+.... +..........+|.++|.++... .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 34567999999999999999999999996321110 00111234567899999999654 67
Q ss_pred eeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCC
Q 016009 188 VKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLE 267 (397)
Q Consensus 188 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 267 (397)
.+.+++ +.-.+||||++|-.|...- ++-...-.++..|++-+.-+-.. |+||+|+++-||++++|
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 777664 3457999999986665432 11222233444444444444455 99999999999999999
Q ss_pred CcEEEeeecccc
Q 016009 268 FEAHVADFGIAK 279 (397)
Q Consensus 268 ~~~kl~Dfg~~~ 279 (397)
|.+.++||--+.
T Consensus 239 g~~~vIDwPQ~v 250 (304)
T COG0478 239 GDIVVIDWPQAV 250 (304)
T ss_pred CCEEEEeCcccc
Confidence 999999996554
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.89 E-value=2.7e-08 Score=85.21 Aligned_cols=128 Identities=22% Similarity=0.285 Sum_probs=93.8
Q ss_pred CCCEEEEEecCCCCCCc---chhcHHHHHHHHHHHHhcc--CCceeeeEEEEecCC----eeeEEEEeccCC-CHHHhhc
Q 016009 148 SGQVVAIKKFHSPLPSD---QIVDKKEFLTEVEALTEIR--HRNIVKLYGFCSHAR----HSFLVYEFLKRG-SLAAILS 217 (397)
Q Consensus 148 ~~~~vavK~~~~~~~~~---~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~----~~~lv~e~~~~g-~L~~~l~ 217 (397)
.++.+.+|.+....... .........+|...+..+. .-.+++.+++..... ..++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 45566666543222111 1123456788998888885 334566677665432 458999999984 8999986
Q ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCC---cEEEeeecccccc
Q 016009 218 SDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEF---EAHVADFGIAKFL 281 (397)
Q Consensus 218 ~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~ 281 (397)
.... .+......++.+++..++-||.. +++|+|+++.|||++.+. .+.++||+-++..
T Consensus 111 ~~~~---~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 111 QWEQ---LDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hhcc---cchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 5332 55567789999999999999999 999999999999998887 8999999987653
No 454
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.85 E-value=7.3e-10 Score=105.94 Aligned_cols=149 Identities=22% Similarity=0.332 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCC----c-----ccccccccccCccccc
Q 016009 234 IKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSN----W-----TEFAGTYGYVAPELAY 304 (397)
Q Consensus 234 ~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~----~-----~~~~g~~~y~aPE~~~ 304 (397)
+.+++.|+.|+|.. +++||++|.|++|.++.++..||+.|+++......... + ....-...|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 34566999999997 58999999999999999999999999987543321111 0 1112355799999999
Q ss_pred CCCCCcchhhHHHHHHHHHHHh-CCCCCCcccccc-ccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCC
Q 016009 305 TMKITEKCDVYSFGVLALEVIK-GKHPRDFLSSIS-SSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESP 382 (397)
Q Consensus 305 ~~~~~~~~Dv~s~G~~l~el~t-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P 382 (397)
+...+.++|+||+|+++|.+.. |+.-+....... ..+.. ...+....... .+.+.++.+=+.+.+..++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~------~~~~~~~~~~s---~~~p~el~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR------NLLNAGAFGYS---NNLPSELRESLKKLLNGDS 253 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh------ccccccccccc---ccCcHHHHHHHHHHhcCCc
Confidence 9888999999999999999995 444333221111 00000 00011111001 2233446666778899999
Q ss_pred CCCCCHHHHHH
Q 016009 383 ESRPTMKIVSQ 393 (397)
Q Consensus 383 ~~RPt~~~vl~ 393 (397)
.-||++.++..
T Consensus 254 ~~rp~~~~l~~ 264 (700)
T KOG2137|consen 254 AVRPTLDLLLS 264 (700)
T ss_pred ccCcchhhhhc
Confidence 99998877653
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.82 E-value=4.1e-08 Score=94.19 Aligned_cols=144 Identities=22% Similarity=0.264 Sum_probs=93.7
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcH------------------------------H------HHHH
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDK------------------------------K------EFLT 174 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~------------------------------~------~~~~ 174 (397)
+-|+.++-|.||+|++++|+.||||+.+......-..+. + ++..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 569999999999999999999999998765432211111 0 1334
Q ss_pred HHHHHHhcc-----CCceeeeEEEE-ecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHH-HHHHHhC
Q 016009 175 EVEALTEIR-----HRNIVKLYGFC-SHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADA-LSYLHHD 247 (397)
Q Consensus 175 e~~~l~~l~-----h~niv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~-l~~Lh~~ 247 (397)
|..-+.+++ .+++ .+=..+ +-.+...|+|||++|-.+.+...-... ..+.+ .++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k---~ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRK---ELAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHH---HHHHHHHHHHHHHHHhc
Confidence 444444442 3333 222223 334667899999999988887432221 24422 333333332 2222223
Q ss_pred CCCCceeccCCCCcEEeCCCCcEEEeeeccccccCC
Q 016009 248 CFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKP 283 (397)
Q Consensus 248 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 283 (397)
+++|+|..|.||+++.++++.+.|||+...+..
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999876653
No 456
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.61 E-value=2.7e-06 Score=71.36 Aligned_cols=104 Identities=22% Similarity=0.259 Sum_probs=82.5
Q ss_pred HHHHHHHhccC-CceeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 016009 174 TEVEALTEIRH-RNIVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPI 252 (397)
Q Consensus 174 ~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 252 (397)
.|.-+++.+++ +++++++|+|- .+++.||...+++......-......+|..|.+|+.++++.+.++++.....+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 57888888865 69999999993 36789999887664321100011246899999999999999999999655568
Q ss_pred eeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 253 VHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 253 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
...|++++|+-+++++++|+.|.+.....
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhcchh
Confidence 89999999999999999999999876543
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.60 E-value=1.5e-06 Score=75.43 Aligned_cols=138 Identities=17% Similarity=0.241 Sum_probs=85.1
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc--eeeeEEEEecCCeeeEEEEecc
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~ 208 (397)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 45899999999984 25567788865311 2455788999999986433 4677888877777889999999
Q ss_pred CCC-HHHhhc---------------------cccccCCCCHHHHHH-H---HH-------HHHH-HHHHHHhC-CCCCce
Q 016009 209 RGS-LAAILS---------------------SDAAAQELGWSQRMN-V---IK-------GVAD-ALSYLHHD-CFPPIV 253 (397)
Q Consensus 209 ~g~-L~~~l~---------------------~~~~~~~l~~~~~~~-i---~~-------~i~~-~l~~Lh~~-~~~~iv 253 (397)
|.+ +...+. .-.. ...+...... + +. .+.. ...+|... ..+.++
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 156 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCL 156 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceE
Confidence 863 221111 1000 0111111110 0 00 0111 12223221 123578
Q ss_pred eccCCCCcEEeCCCCcEEEeeecccc
Q 016009 254 HRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 254 H~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
|+|+.|.||++++++ +.++||+.+.
T Consensus 157 HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 157 HGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred ecCCCCCcEEEcCCC-cEEEechhcC
Confidence 999999999999888 9999998875
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.58 E-value=5.5e-07 Score=75.98 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=89.3
Q ss_pred hcCCCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHH------HHHHHHHHHHhccC---CceeeeEEEE
Q 016009 124 TNDFDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKK------EFLTEVEALTEIRH---RNIVKLYGFC 194 (397)
Q Consensus 124 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~~e~~~l~~l~h---~niv~~~~~~ 194 (397)
..+|...+++-......|.+-.. +|+.+++|..+......+ .... ...+++..+.+++. .....++...
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~e-r~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPE-RRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHH-HHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 45677777777777667766666 578899998765332211 1111 12334444444432 2222323222
Q ss_pred e-----cCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCc
Q 016009 195 S-----HARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFE 269 (397)
Q Consensus 195 ~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 269 (397)
. -....+++|||++|..|.+... ++. .++..+++++.-+|.. |++|+|..|.|+++++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~- 172 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG- 172 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc-
Confidence 2 2234568999999988876532 222 2456677889999999 999999999999998655
Q ss_pred EEEeeecccc
Q 016009 270 AHVADFGIAK 279 (397)
Q Consensus 270 ~kl~Dfg~~~ 279 (397)
+++.||+..+
T Consensus 173 i~iID~~~k~ 182 (229)
T PF06176_consen 173 IRIIDTQGKR 182 (229)
T ss_pred EEEEECcccc
Confidence 9999997654
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.58 E-value=8.5e-07 Score=75.67 Aligned_cols=156 Identities=21% Similarity=0.277 Sum_probs=101.4
Q ss_pred ccHHHHHHHhcCCCCCc---cccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchh---------------cHH-----H
Q 016009 115 LVYDEIVRATNDFDAQY---CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIV---------------DKK-----E 171 (397)
Q Consensus 115 ~~~~~~~~~~~~~~~~~---~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~---------------~~~-----~ 171 (397)
.+.+.+....+...+.. .|++|.-+.||+|...++..+|||+++......... ... -
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 34455555555554444 466788899999988889999999986532211100 011 1
Q ss_pred HHHHHHHHHhcc--CCceeeeEEEEecCCeeeEEEEeccCCC-HHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 016009 172 FLTEVEALTEIR--HRNIVKLYGFCSHARHSFLVYEFLKRGS-LAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDC 248 (397)
Q Consensus 172 ~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g~-L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~ 248 (397)
...|..-|+++. +-.+.+.+++.. -.|||||+.... -.-.|..- ++...+...+..++++.+.-|-..+
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkDv----~~e~~e~~~~~~~~v~~~~~l~~~a 186 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRLKDV----PLELEEAEGLYEDVVEYMRRLYKEA 186 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCcccC----CcCchhHHHHHHHHHHHHHHHHHhc
Confidence 346777777773 445555665543 369999996531 11111111 1233356677778888888877732
Q ss_pred CCCceeccCCCCcEEeCCCCcEEEeeecccccc
Q 016009 249 FPPIVHRDISSKNLLLDLEFEAHVADFGIAKFL 281 (397)
Q Consensus 249 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 281 (397)
++||+||+.-|||+. ++.+.++|+|-+...
T Consensus 187 --~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 187 --GLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred --CcccccchhhheEEE-CCeEEEEECcccccc
Confidence 999999999999999 889999999987643
No 460
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.52 E-value=1.1e-08 Score=97.16 Aligned_cols=184 Identities=20% Similarity=0.156 Sum_probs=134.2
Q ss_pred CCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc-eeeeEEEEecCCeeeEEEEec
Q 016009 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN-IVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~ 207 (397)
.-+-+++|++++++|.+-.-.+....+.+.. .....-++++|.+++||| .++.++-++.+...+++++++
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~h~fvs~---------~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~ 316 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ---------TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRIC 316 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhheeceeecc---------chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhh
Confidence 3345788999999988644334444555432 134557889999999999 777777777788889999999
Q ss_pred cCC-CHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCC
Q 016009 208 KRG-SLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSS 286 (397)
Q Consensus 208 ~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 286 (397)
.++ +-..-.. .....+...+...+...-+++++++|+. .-+|+| ||+..+ +..+..||+....+....
T Consensus 317 s~~rs~~~~~~--~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~- 385 (829)
T KOG0576|consen 317 STGRSSALEMT--VSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM- 385 (829)
T ss_pred cCCccccccCC--hhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc-
Confidence 877 2211111 1111244455666777778899999986 458888 777765 678999999988776543
Q ss_pred CcccccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 016009 287 NWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 332 (397)
Q Consensus 287 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg~~p~~ 332 (397)
......+++.++|||+.....+..+.|+|+.|.--.++.-|-+|-.
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 3455678999999999999999999999999988778888877743
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.38 E-value=8.2e-06 Score=71.97 Aligned_cols=139 Identities=16% Similarity=0.153 Sum_probs=84.8
Q ss_pred ccccCc-EEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCceeeeEEEEecCCeeeEEEEeccCC
Q 016009 133 IGNGGH-GSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNIVKLYGFCSHARHSFLVYEFLKRG 210 (397)
Q Consensus 133 lg~G~~-g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g 210 (397)
|..|.. ..||+.... +..+++|...... ...+..|+++++.+. +--+.+++++....+..++|||+++|.
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~-------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP-------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc-------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 344444 788999764 4678888865321 235678999988883 445667788777666789999999998
Q ss_pred CHHHhhc-------------------cccc-cCCCC--HHHHHHHHH--------------------HHHHHHHHHHhC-
Q 016009 211 SLAAILS-------------------SDAA-AQELG--WSQRMNVIK--------------------GVADALSYLHHD- 247 (397)
Q Consensus 211 ~L~~~l~-------------------~~~~-~~~l~--~~~~~~i~~--------------------~i~~~l~~Lh~~- 247 (397)
++..... .-.. ..++. ......... .+......|-..
T Consensus 78 ~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 157 (244)
T cd05150 78 PAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATR 157 (244)
T ss_pred cHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhC
Confidence 8765421 1000 00111 000010000 011122222211
Q ss_pred ---CCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 248 ---CFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 248 ---~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
..+.++|+|+.|.||+++++....|+||+.+.
T Consensus 158 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 158 PAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 12468999999999999998778899998775
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.37 E-value=3.6e-06 Score=80.73 Aligned_cols=145 Identities=19% Similarity=0.225 Sum_probs=89.5
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcH---------------------------H------HHHHHHH
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDK---------------------------K------EFLTEVE 177 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------------~------~~~~e~~ 177 (397)
+.||.-+.|.||+|++++|+.||||+-+......-..+. + +|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 569999999999999999999999997764432211110 1 1344444
Q ss_pred HHHhc----cCCc---eeeeEEEE-ecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 016009 178 ALTEI----RHRN---IVKLYGFC-SHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCF 249 (397)
Q Consensus 178 ~l~~l----~h~n---iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~ 249 (397)
-..+. +|-+ -|.+=.++ .......|+||||+|..+.+.-.-.. ..++... ++..+.++.. +.-..
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~---i~~~l~~~~~--~qIf~ 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK--RGISPHD---ILNKLVEAYL--EQIFK 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH--cCCCHHH---HHHHHHHHHH--HHHHh
Confidence 33333 3444 11122222 22346789999999987766532111 1244443 3333333321 11111
Q ss_pred CCceeccCCCCcEEeCC----CCcEEEeeeccccccC
Q 016009 250 PPIVHRDISSKNLLLDL----EFEAHVADFGIAKFLK 282 (397)
Q Consensus 250 ~~ivH~dlk~~Nill~~----~~~~kl~Dfg~~~~~~ 282 (397)
.|.+|+|=.|.||+++. ++++.+-|||+...+.
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 28999999999999984 6789999999987654
No 463
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.34 E-value=9.5e-06 Score=70.90 Aligned_cols=142 Identities=17% Similarity=0.251 Sum_probs=83.5
Q ss_pred ccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCC--ceeeeEEEEec---CCeeeEEEE
Q 016009 131 YCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR--NIVKLYGFCSH---ARHSFLVYE 205 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~---~~~~~lv~e 205 (397)
+.++.|..+.||+....+ ..+++|..... .....+..|..+++.+... .+.+++.+... ....+++|+
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 458899999999998877 58999986531 2356788999999988533 35666665432 234689999
Q ss_pred eccCCCHHH----------------hh---cccc-ccCCCCHHH---------HHHH------------HHHHHH-HHHH
Q 016009 206 FLKRGSLAA----------------IL---SSDA-AAQELGWSQ---------RMNV------------IKGVAD-ALSY 243 (397)
Q Consensus 206 ~~~~g~L~~----------------~l---~~~~-~~~~l~~~~---------~~~i------------~~~i~~-~l~~ 243 (397)
+++|..+.. .+ +... ......+.. .... ...+.+ .+..
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE 155 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 999988877 11 0110 001111100 0000 111222 3333
Q ss_pred HHh----CCCCCceeccCCCCcEEeC-CCCcEEEeeecccc
Q 016009 244 LHH----DCFPPIVHRDISSKNLLLD-LEFEAHVADFGIAK 279 (397)
Q Consensus 244 Lh~----~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~ 279 (397)
++. .....++|+|+.+.||+++ +++.+.|.||+.+.
T Consensus 156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 332 1234699999999999999 66667899998764
No 464
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.34 E-value=2.9e-05 Score=65.43 Aligned_cols=138 Identities=20% Similarity=0.284 Sum_probs=95.3
Q ss_pred CCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCc------------chhcHHHHHHHHHHHHhcc------CCceeee
Q 016009 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSD------------QIVDKKEFLTEVEALTEIR------HRNIVKL 190 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~~~e~~~l~~l~------h~niv~~ 190 (397)
....||+|+.-.||. +++.....||++....... .....++..+|+.-...+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 355699999988885 5556678899887643000 0112466777777776665 8899999
Q ss_pred EEEEecCCeeeEEEEeccC------CCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEe
Q 016009 191 YGFCSHARHSFLVYEFLKR------GSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLL 264 (397)
Q Consensus 191 ~~~~~~~~~~~lv~e~~~~------g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 264 (397)
+|+.+++....+|+|.+.+ -+|.+++.... ++. .. ...+-+-..||-.. .|+.+|++|+||++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~-~~---~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE-EL---RQALDEFKRYLLDH---HIVIRDLNPHNIVV 151 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH-HH---HHHHHHHHHHHHHc---CCeecCCCcccEEE
Confidence 9999999999999998753 36777774432 444 33 33334445677777 89999999999999
Q ss_pred CCCC----cEEEee-ecccc
Q 016009 265 DLEF----EAHVAD-FGIAK 279 (397)
Q Consensus 265 ~~~~----~~kl~D-fg~~~ 279 (397)
..+. .+.|+| ||...
T Consensus 152 ~~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 152 QRRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred EecCCCceEEEEEeCCCCcc
Confidence 5332 577777 56544
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.33 E-value=7.4e-06 Score=66.17 Aligned_cols=128 Identities=20% Similarity=0.271 Sum_probs=86.1
Q ss_pred CCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEecc
Q 016009 129 AQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 129 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
..+.|++|++|.||+|.+. |..+|+|+-+.+. ....+..|+++|..++-.++.+=+-.+. .-++.|||+.
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds------~r~~l~kEakiLeil~g~~~~p~vy~yg---~~~i~me~i~ 95 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS------PRRNLEKEAKILEILAGEGVTPEVYFYG---EDFIRMEYID 95 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCc------chhhHHHHHHHHHHhhhcCCCceEEEec---hhhhhhhhhc
Confidence 3566999999999999885 4588999865432 3577899999999998766654332222 2234599999
Q ss_pred CCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCC--CcEEeCCCCcEEEeeeccccc
Q 016009 209 RGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISS--KNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 209 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~--~Nill~~~~~~kl~Dfg~~~~ 280 (397)
|-.|.+.-... +-++. ..+++.---|... ||-|+.|.- .||++.++ .+.|+||..|+.
T Consensus 96 G~~L~~~~~~~------~rk~l----~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~-~~~iIDFd~At~ 155 (201)
T COG2112 96 GRPLGKLEIGG------DRKHL----LRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDR-DVYIIDFDSATF 155 (201)
T ss_pred Ccchhhhhhcc------cHHHH----HHHHHHHHHHHHh---ccchhhhcCCceeEEecCC-cEEEEEccchhh
Confidence 98888775421 11222 3344442223333 888888864 56666554 999999998874
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.26 E-value=2.6e-05 Score=80.72 Aligned_cols=149 Identities=17% Similarity=0.289 Sum_probs=92.1
Q ss_pred CccccccCcEEEEEEEeCCC---CEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-CCce--eeeEEEEecC---Cee
Q 016009 130 QYCIGNGGHGSVYRAELPSG---QVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-HRNI--VKLYGFCSHA---RHS 200 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~ 200 (397)
.+.++.|.+..+|+....++ ..+++|+...... ......+.+|.++++.+. |.++ .+++.+|.+. +..
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~---~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL---LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc---CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 45588899999999876654 3677776532111 112457889999999995 6654 7788888664 467
Q ss_pred eEEEEeccCCCHHHh-----------------------hccccc--------cCCCCH--HHHHHHH-------------
Q 016009 201 FLVYEFLKRGSLAAI-----------------------LSSDAA--------AQELGW--SQRMNVI------------- 234 (397)
Q Consensus 201 ~lv~e~~~~g~L~~~-----------------------l~~~~~--------~~~l~~--~~~~~i~------------- 234 (397)
|+||||++|..+.+. |+.-.. ..+..+ .++..|.
T Consensus 120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~ 199 (822)
T PLN02876 120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP 199 (822)
T ss_pred eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence 899999998653221 111000 001111 1111111
Q ss_pred --HHHHHHHHHHHhCCC--------CCceeccCCCCcEEeCCC-Cc-EEEeeecccccc
Q 016009 235 --KGVADALSYLHHDCF--------PPIVHRDISSKNLLLDLE-FE-AHVADFGIAKFL 281 (397)
Q Consensus 235 --~~i~~~l~~Lh~~~~--------~~ivH~dlk~~Nill~~~-~~-~kl~Dfg~~~~~ 281 (397)
..+.+.+.+|..+.. +.+||+|+++.||+++.+ .. .-|.||+++..-
T Consensus 200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 123344667755322 259999999999999853 33 578999987653
No 467
>PRK10593 hypothetical protein; Provisional
Probab=98.15 E-value=5.3e-05 Score=68.72 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=56.5
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccC---CceeeeEEEEec---CCeeeEE
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH---RNIVKLYGFCSH---ARHSFLV 203 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~---~~~~~lv 203 (397)
.+.||.|..+.||+....+++ +++|..+. . .....+..|.+.|+.+.- -.+.+++++|.. .+..++|
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~-~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMARS-F-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEecc-c-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 456999999999999776664 66676432 1 123578899999999842 468888888754 3668999
Q ss_pred EEeccCCCH
Q 016009 204 YEFLKRGSL 212 (397)
Q Consensus 204 ~e~~~~g~L 212 (397)
||+++++++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999998765
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.09 E-value=4e-05 Score=67.11 Aligned_cols=73 Identities=14% Similarity=0.214 Sum_probs=45.0
Q ss_pred ccccccCcE-EEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCC---ceeeeEEEEecC---CeeeEE
Q 016009 131 YCIGNGGHG-SVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR---NIVKLYGFCSHA---RHSFLV 203 (397)
Q Consensus 131 ~~lg~G~~g-~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~---~~~~lv 203 (397)
+.++.|+.. .||+. +..+++|..... .....+..|.++++.+... .+.+.++..... ...+++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~------~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l 72 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAA------GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV 72 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCcc------chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence 346666665 58875 235777764421 1245788999999888532 344445444332 234889
Q ss_pred EEeccCCCHH
Q 016009 204 YEFLKRGSLA 213 (397)
Q Consensus 204 ~e~~~~g~L~ 213 (397)
|++++|.++.
T Consensus 73 ~~~i~G~~l~ 82 (235)
T cd05155 73 YRWLEGETAT 82 (235)
T ss_pred EEeecCCCCC
Confidence 9999997764
No 469
>PLN03150 hypothetical protein; Provisional
Probab=98.09 E-value=6.7e-06 Score=82.21 Aligned_cols=48 Identities=25% Similarity=0.567 Sum_probs=29.5
Q ss_pred CCCCCEEecCCCcccccCCCCCc--cccCCcccccCCCCCCCCCCCCCCCC
Q 016009 1 MHGLSVIDISDNQLQGPVPNSTA--FRNASVEALEGNKGLCGGVKGMQPCK 49 (397)
Q Consensus 1 l~~L~~ldls~N~l~G~iP~~~~--~~~~~~~~~~gN~~lcg~~~~~~~c~ 49 (397)
|++|++||||+|+|+|.+|.... +.+.....+.+|+.+||.+. ...|.
T Consensus 489 L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~-l~~C~ 538 (623)
T PLN03150 489 LTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG-LRACG 538 (623)
T ss_pred CCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCCC-CCCCc
Confidence 35566666666666666665321 12233457889999998653 45674
No 470
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.09 E-value=5.5e-05 Score=63.27 Aligned_cols=129 Identities=25% Similarity=0.410 Sum_probs=89.0
Q ss_pred cCCCCCccccccCc-EEEEEEEeCCCCEEEEEecCC---CCC--------Ccch------hcHHHHHHHHHHHHhcc---
Q 016009 125 NDFDAQYCIGNGGH-GSVYRAELPSGQVVAIKKFHS---PLP--------SDQI------VDKKEFLTEVEALTEIR--- 183 (397)
Q Consensus 125 ~~~~~~~~lg~G~~-g~vy~~~~~~~~~vavK~~~~---~~~--------~~~~------~~~~~~~~e~~~l~~l~--- 183 (397)
.+++..+.||.|.- |.||+++. +|+.+|+|.+.. ... .... .-...|..|.+...+++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67888899999999 99999998 677999999321 000 0000 12346888999888884
Q ss_pred CCce--eeeEEEEecC------------------CeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHH
Q 016009 184 HRNI--VKLYGFCSHA------------------RHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSY 243 (397)
Q Consensus 184 h~ni--v~~~~~~~~~------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~ 243 (397)
+.++ |+.+||..-. ....+|.||++... .++.. -+.++.+-|..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~----~~~~~~~dl~~ 179 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIR----DIPQMLRDLKI 179 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchh----HHHHHHHHHHH
Confidence 4455 8999987221 12357777776533 12222 34456666788
Q ss_pred HHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccc
Q 016009 244 LHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIA 278 (397)
Q Consensus 244 Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 278 (397)
+|.. +|+-+|+++.|.. .-+|+|||.+
T Consensus 180 ~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 9998 9999999999985 3578899864
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.03 E-value=9.5e-05 Score=64.75 Aligned_cols=141 Identities=17% Similarity=0.203 Sum_probs=80.2
Q ss_pred ccccccCcEEEEEEEeCC--CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc-eeeeEEEEecCCeeeEEEEec
Q 016009 131 YCIGNGGHGSVYRAELPS--GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN-IVKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 131 ~~lg~G~~g~vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~ 207 (397)
+.|..|-...+|+....+ +..+++|....... . ......|+.+++.+...+ .+++++... -.++|||+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~----~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i 74 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-L----IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFI 74 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-c----eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEee
Confidence 346777788999997764 67888997653211 1 122347888888885333 344444332 24799999
Q ss_pred cCCCHHHh-----------------hcccccc--------CCCC-HHHHHHHHH----------------------HHHH
Q 016009 208 KRGSLAAI-----------------LSSDAAA--------QELG-WSQRMNVIK----------------------GVAD 239 (397)
Q Consensus 208 ~~g~L~~~-----------------l~~~~~~--------~~l~-~~~~~~i~~----------------------~i~~ 239 (397)
+|.++... ++..... .... |..+..+.. .+..
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 154 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRD 154 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHH
Confidence 98776321 0111100 0111 222212211 1111
Q ss_pred HHHHH----HhC-CCCCceeccCCCCcEEeCC-CCcEEEeeeccccc
Q 016009 240 ALSYL----HHD-CFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKF 280 (397)
Q Consensus 240 ~l~~L----h~~-~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 280 (397)
.+..| ... ....++|+|+.+.||++++ ++.+.++||..+..
T Consensus 155 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 155 EISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 11222 211 1236899999999999998 57899999987753
No 472
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.00 E-value=4e-05 Score=78.36 Aligned_cols=195 Identities=18% Similarity=0.204 Sum_probs=132.4
Q ss_pred HHHHHHHHHhccCCceeeeEEEEecCCee----eEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Q 016009 172 FLTEVEALTEIRHRNIVKLYGFCSHARHS----FLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHD 247 (397)
Q Consensus 172 ~~~e~~~l~~l~h~niv~~~~~~~~~~~~----~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~ 247 (397)
...|.+.+.+..|+|++.++.|-...... .+..|++..-++...+..-. ..+....+.+..+..+|+.|+|+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---SIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---ccCHHHHHHHHHHHhhhHHHHHHh
Confidence 45577778888999999999987554322 34457777778877775433 478888999999999999999998
Q ss_pred CCCCceeccCCCC---cEEeCCCCcEEEe--eeccccccCCCCCCcccccccccccCcccccCCCCCc--chhhHHHHHH
Q 016009 248 CFPPIVHRDISSK---NLLLDLEFEAHVA--DFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITE--KCDVYSFGVL 320 (397)
Q Consensus 248 ~~~~ivH~dlk~~---Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~--~~Dv~s~G~~ 320 (397)
...|.-|..+ +.-.+.++...++ ||+.+..+........ ..-+..+.+||......+.. ..|+|++|..
T Consensus 306 ---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~-~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll 381 (1351)
T KOG1035|consen 306 ---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS-DLLAEIRNADEDLKENTAKKSRLTDLWCLGLL 381 (1351)
T ss_pred ---ccceeEEecccccccccCccceeecchhhhcccccCCCcccchh-hcCccccccccccccccchhhhhhHHHHHHHH
Confidence 5556555555 5555666777776 8888776543322222 23345677888766554443 4799999999
Q ss_pred HHHHHhCCCCCCccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 016009 321 ALEVIKGKHPRDFLSSISSSFLNTDIELDEMLDPRLPAPSRSVQEKLRSIVEVVFSCLNESPESRPTMKIVSQQ 394 (397)
Q Consensus 321 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPt~~~vl~~ 394 (397)
...+..|..+-.... ....+.+.... ..+.+....|+..++++|++..+++.+
T Consensus 382 ~~~~~~~~~i~~~~~-----------~~~~~l~~~~~----------~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 382 LLQLSQGEDISEKSA-----------VPVSLLDVLST----------SELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred HhhhhhcCccccccc-----------chhhhhccccc----------hhhhhhhhhhcchhhhhccchhhhhhc
Confidence 999999876622111 01111111110 136677779999999999999999865
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.92 E-value=0.00028 Score=66.06 Aligned_cols=80 Identities=21% Similarity=0.222 Sum_probs=55.3
Q ss_pred CccccccCcEEEEEEEeCCC-CEEEEEecCCCCCC--cc-hhcHHHHHHHHHHHHhcc---CCceeeeEEEEecCCeeeE
Q 016009 130 QYCIGNGGHGSVYRAELPSG-QVVAIKKFHSPLPS--DQ-IVDKKEFLTEVEALTEIR---HRNIVKLYGFCSHARHSFL 202 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~-~~vavK~~~~~~~~--~~-~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~l 202 (397)
.+.||.|.+..||++...+| +.++||.-...... .. ....+....|.+.|+.+. -.++++++.+ +....++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 35689999999999988777 48999985422111 11 124567778888888873 2456667766 3455789
Q ss_pred EEEeccCCC
Q 016009 203 VYEFLKRGS 211 (397)
Q Consensus 203 v~e~~~~g~ 211 (397)
||||+++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999998643
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.86 E-value=0.00017 Score=63.99 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=77.7
Q ss_pred ccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCce-eeeEEEEecCCeeeEEEEeccCCC
Q 016009 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI-VKLYGFCSHARHSFLVYEFLKRGS 211 (397)
Q Consensus 133 lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~ 211 (397)
+..|-.+.+|+... +++.+++|......... .-....|.++++.+....+ .++++... -++||||++|..
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~----~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~ 74 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKAL----GVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEV 74 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCcccccc----cCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcc
Confidence 45677788998874 56678888754321110 0134678889998854333 34444432 368999999876
Q ss_pred HHHh-----------------hccccc-cCCCCHHHH-HHHHHH---------HHHHHHHHHhC-----CCCCceeccCC
Q 016009 212 LAAI-----------------LSSDAA-AQELGWSQR-MNVIKG---------VADALSYLHHD-----CFPPIVHRDIS 258 (397)
Q Consensus 212 L~~~-----------------l~~~~~-~~~l~~~~~-~~i~~~---------i~~~l~~Lh~~-----~~~~ivH~dlk 258 (397)
+... ++.... ..+++.... .....+ +...+..+... ..+.++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 5421 111111 112222211 111111 11112222221 12358999999
Q ss_pred CCcEEeCCCCcEEEeeeccccc
Q 016009 259 SKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 259 ~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
|.||++++++ +.++||+.+..
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCc
Confidence 9999999877 78999988764
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.83 E-value=0.00023 Score=64.75 Aligned_cols=142 Identities=21% Similarity=0.213 Sum_probs=85.4
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc--eeeeEEE------EecCCeee
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKLYGF------CSHARHSF 201 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~------~~~~~~~~ 201 (397)
.+.+..|....+|+....++ .+++|.... .....+..|++++..+.+.. +.+++.. ....+..+
T Consensus 19 i~~i~~G~~n~~y~v~~~~~-~~vLr~~~~-------~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~ 90 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSG-RYVLTLFEK-------VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA 90 (296)
T ss_pred eecccCccccceEEEEeCCC-cEEEEEcCC-------CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence 44577777789999876544 688888653 12356677888888885332 4444432 12344568
Q ss_pred EEEEeccCCCHHH----hh----------ccc----cc----cCCCCHHHHH----------HHHHHHHHHHHHHHh---
Q 016009 202 LVYEFLKRGSLAA----IL----------SSD----AA----AQELGWSQRM----------NVIKGVADALSYLHH--- 246 (397)
Q Consensus 202 lv~e~~~~g~L~~----~l----------~~~----~~----~~~l~~~~~~----------~i~~~i~~~l~~Lh~--- 246 (397)
+|++|++|..+.. .. +.. .. .....|.... .....+..++.++..
T Consensus 91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 170 (296)
T cd05153 91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP 170 (296)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence 9999999876532 00 100 00 0112232211 111223344555553
Q ss_pred -CCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 247 -DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 247 -~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
....+++|+|+.|.||+++++....|.||+.+.
T Consensus 171 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 171 SDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred hcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 122479999999999999998778899998775
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.72 E-value=0.00087 Score=61.62 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=83.3
Q ss_pred HHHHHHHhcCCCC-----CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCC--ceee
Q 016009 117 YDEIVRATNDFDA-----QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR--NIVK 189 (397)
Q Consensus 117 ~~~~~~~~~~~~~-----~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~ 189 (397)
.+++......|.. .+.++.|....+|+....+| .+++|++.. . ..+.+..|.++++.+... .+.+
T Consensus 9 ~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~-~------~~~~l~~~~~~l~~L~~~glpvP~ 80 (319)
T PRK05231 9 DDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFER-L------TAEDLPFFLGLMQHLAARGVPVPA 80 (319)
T ss_pred HHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEecc-C------ChHHhHHHHHHHHHHHHCCCCCCc
Confidence 3444444344533 24466677788999877665 688887641 1 123445566666666322 2333
Q ss_pred eEE------EEecCCeeeEEEEeccCCCHHH-----h---------hcccc--------ccCCCCH-HHHHH--------
Q 016009 190 LYG------FCSHARHSFLVYEFLKRGSLAA-----I---------LSSDA--------AAQELGW-SQRMN-------- 232 (397)
Q Consensus 190 ~~~------~~~~~~~~~lv~e~~~~g~L~~-----~---------l~~~~--------~~~~l~~-~~~~~-------- 232 (397)
.+. +....+..++++||++|..+.. . ++... ....+.| .....
T Consensus 81 ~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (319)
T PRK05231 81 PVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLAD 160 (319)
T ss_pred ceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccCh
Confidence 332 1123456789999999875421 1 11100 0001112 11111
Q ss_pred ----HHHH-HHHHHHHHHhC----CCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 233 ----VIKG-VADALSYLHHD----CFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 233 ----i~~~-i~~~l~~Lh~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.+.+ +...+..+... ...+++|+|+.+.||+++++...-|.||+.+.
T Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 161 EQAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred hHHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1111 11222333311 23489999999999999876656899999875
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.70 E-value=0.0004 Score=63.29 Aligned_cols=140 Identities=22% Similarity=0.276 Sum_probs=81.6
Q ss_pred cccccCcEEEEEEEeCC-------CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc-eeeeEEEEecCCeeeEE
Q 016009 132 CIGNGGHGSVYRAELPS-------GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN-IVKLYGFCSHARHSFLV 203 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv 203 (397)
.+..|-...+|+....+ ++.+++|....... .......|.++++.+.... ..++++++.. .+|
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v 75 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-----LLIDRERELVVFARLSERNLGPKLYGIFPN----GRI 75 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-----ceechHHHHHHHHHHHhCCCCCceEEEeCC----Cch
Confidence 35556667899987655 57899998654221 1234568888888885333 3445555532 358
Q ss_pred EEeccCCCHHHh-h----------------ccccccC------CC--CHHHHHHH-------------------------
Q 016009 204 YEFLKRGSLAAI-L----------------SSDAAAQ------EL--GWSQRMNV------------------------- 233 (397)
Q Consensus 204 ~e~~~~g~L~~~-l----------------~~~~~~~------~l--~~~~~~~i------------------------- 233 (397)
+||++|..+... + +...... .. -|.....+
T Consensus 76 ~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (302)
T cd05156 76 EEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSL 155 (302)
T ss_pred hheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHH
Confidence 999998776431 1 1111100 00 01111111
Q ss_pred -HHHHHHHHHHHHh------CCCCCceeccCCCCcEEeCCC----CcEEEeeeccccc
Q 016009 234 -IKGVADALSYLHH------DCFPPIVHRDISSKNLLLDLE----FEAHVADFGIAKF 280 (397)
Q Consensus 234 -~~~i~~~l~~Lh~------~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 280 (397)
...+...+.++.. .....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 156 ~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 156 FLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 1122223344432 133478999999999999985 8899999988753
No 478
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.67 E-value=0.0016 Score=59.46 Aligned_cols=143 Identities=20% Similarity=0.201 Sum_probs=82.6
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc--eeeeEEEE------ecCCeee
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN--IVKLYGFC------SHARHSF 201 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~------~~~~~~~ 201 (397)
.+.++.|....+|+....+| .+++|..+... ..+.+..|.+++..|.... +.+++... ...+..+
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~------~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~ 99 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRV------KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPA 99 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCC------CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEE
Confidence 34567777789999876555 57788764311 1345566777777774322 34444321 2235578
Q ss_pred EEEEeccCCCHHHh--------------hcccccc---------CCCCHHHHH------------HHHHHHHHHHHHHHh
Q 016009 202 LVYEFLKRGSLAAI--------------LSSDAAA---------QELGWSQRM------------NVIKGVADALSYLHH 246 (397)
Q Consensus 202 lv~e~~~~g~L~~~--------------l~~~~~~---------~~l~~~~~~------------~i~~~i~~~l~~Lh~ 246 (397)
+++||++|..+... ++..... ..-.|.... .....+.+.++++..
T Consensus 100 ~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~ 179 (307)
T TIGR00938 100 CLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDK 179 (307)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHh
Confidence 99999988653210 1110000 001122111 011123344555543
Q ss_pred ----CCCCCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 247 ----DCFPPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 247 ----~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
....+++|+|+.+.||++++++...|.||+.+.
T Consensus 180 ~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 180 FWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 223589999999999999988877899998875
No 479
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.56 E-value=0.0008 Score=61.03 Aligned_cols=144 Identities=24% Similarity=0.287 Sum_probs=95.9
Q ss_pred CCCccccccCcEEEEEEEeCCCCEEEEEecCCCCCCc--------------------chhc--HHHHHHHHHHHHhccCC
Q 016009 128 DAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSD--------------------QIVD--KKEFLTEVEALTEIRHR 185 (397)
Q Consensus 128 ~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~--------------------~~~~--~~~~~~e~~~l~~l~h~ 185 (397)
.+..+|..|.-+.||.+...+|..+|||+++...-.- ++.. +.-...|++-|++++..
T Consensus 147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3456788999999999999999999999875432100 0000 11235678888888654
Q ss_pred ceeeeEEEEecCCeeeEEEEeccCCCH-HHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEe
Q 016009 186 NIVKLYGFCSHARHSFLVYEFLKRGSL-AAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLL 264 (397)
Q Consensus 186 niv~~~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 264 (397)
.|.-.--... ..-.|||+|+....- .-.|.. ..++...+...-.+++.-|.-|-+.| ++||.||.--|+|+
T Consensus 227 GIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd----~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly 298 (520)
T KOG2270|consen 227 GIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKD----ASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY 298 (520)
T ss_pred CCCCCCceee--ecceEeeeeccCCCCcCccccc----ccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE
Confidence 4332111111 123689999853221 111111 24667778888889999999888887 89999999999999
Q ss_pred CCCCcEEEeeeccccc
Q 016009 265 DLEFEAHVADFGIAKF 280 (397)
Q Consensus 265 ~~~~~~kl~Dfg~~~~ 280 (397)
. +|.+.++|.+-+..
T Consensus 299 h-dG~lyiIDVSQSVE 313 (520)
T KOG2270|consen 299 H-DGKLYIIDVSQSVE 313 (520)
T ss_pred E-CCEEEEEEcccccc
Confidence 5 45889999877653
No 480
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.53 E-value=0.0018 Score=58.59 Aligned_cols=146 Identities=18% Similarity=0.304 Sum_probs=82.4
Q ss_pred ccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccC--CceeeeEEEEecCC--eeeEEEEecc
Q 016009 133 IGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRH--RNIVKLYGFCSHAR--HSFLVYEFLK 208 (397)
Q Consensus 133 lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~--~~~lv~e~~~ 208 (397)
...|..-.+|..... ++.+++. ... ............+|..+++.+.- --+...+++|..+. ..+.||+|++
T Consensus 33 ~~~G~sn~t~~~~~~-~~~~vlR-~P~--~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~ve 108 (321)
T COG3173 33 ISGGWSNDTFRLGDT-GQKYVLR-KPP--RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVE 108 (321)
T ss_pred ccCCcccceEEEecC-CceEEEe-cCC--ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEec
Confidence 333433444444432 7778877 221 11222234566788888888742 34455677776665 7799999998
Q ss_pred CCCHHHhhccccc-----------------------------------cCCCCHHHHHHHH--------HHHHHHHHHHH
Q 016009 209 RGSLAAILSSDAA-----------------------------------AQELGWSQRMNVI--------KGVADALSYLH 245 (397)
Q Consensus 209 ~g~L~~~l~~~~~-----------------------------------~~~l~~~~~~~i~--------~~i~~~l~~Lh 245 (397)
|..+.+.+..... .+--.|...++.+ -....-..||+
T Consensus 109 Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~ 188 (321)
T COG3173 109 GEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLE 188 (321)
T ss_pred ceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHH
Confidence 8433222211000 0001111111100 01122345555
Q ss_pred hCCC-----CCceeccCCCCcEEeCCCCcEEEeeeccccccC
Q 016009 246 HDCF-----PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLK 282 (397)
Q Consensus 246 ~~~~-----~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 282 (397)
.+.. +.++|+|+.+.|++++++.-+-|.||+++..-.
T Consensus 189 ~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 189 ANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred hcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 4432 468999999999999999889999999987643
No 481
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.47 E-value=2.1e-05 Score=82.27 Aligned_cols=162 Identities=14% Similarity=0.063 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHhccCCceeeeEEEEe--cCCeeeEEEEeccCCCHHHhhccccc-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 016009 170 KEFLTEVEALTEIRHRNIVKLYGFCS--HARHSFLVYEFLKRGSLAAILSSDAA-AQELGWSQRMNVIKGVADALSYLHH 246 (397)
Q Consensus 170 ~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~ 246 (397)
+....|.+-++...|+++.....-.. ...+.+.+++|+.+|.+.+.+-.+.. ...+...-+.....+......-.|+
T Consensus 1274 emll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred HhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence 34455555666678988776655442 33466889999999999999865432 1223333233333332444444444
Q ss_pred CCC--CCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCcccccccccccCcccccCCCCCcchhhHHHHHHHHHH
Q 016009 247 DCF--PPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEV 324 (397)
Q Consensus 247 ~~~--~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el 324 (397)
... .-.+|++||+-|.++..+..++++++|+.+...+.........+++.|++|+......++.++|+|..|+.+|+.
T Consensus 1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 321 236899999999999999999999999998444444445556788899999999888899999999999999999
Q ss_pred HhCCCCC
Q 016009 325 IKGKHPR 331 (397)
Q Consensus 325 ~tg~~p~ 331 (397)
.-|..++
T Consensus 1434 s~~n~~f 1440 (2724)
T KOG1826|consen 1434 SDGNAYF 1440 (2724)
T ss_pred hcccHHH
Confidence 8888775
No 482
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.42 E-value=0.00033 Score=62.34 Aligned_cols=136 Identities=14% Similarity=0.123 Sum_probs=91.0
Q ss_pred CCCCccccccCcEEEEEEEeCCCCEEEEEecCCCCC------------------CcchhcHHHHHHHHHHHHhccC--Cc
Q 016009 127 FDAQYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLP------------------SDQIVDKKEFLTEVEALTEIRH--RN 186 (397)
Q Consensus 127 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~~~~~e~~~l~~l~h--~n 186 (397)
++..+.||-|.-+.+|.+...+|++.++|.=+.... +......-...+|...|+.+.. --
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 456778999999999999999999998885221000 0011112234678888888843 33
Q ss_pred eeeeEEEEecCCeeeEEEEeccCCCHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCC
Q 016009 187 IVKLYGFCSHARHSFLVYEFLKRGSLAAILSSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDL 266 (397)
Q Consensus 187 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 266 (397)
+.+.++++ .-++|||++.+-.|...-+- .+.++ +...+..-+.-|..+ |+||+|.+-=||++++
T Consensus 174 VPkpiD~~----RH~Vvmelv~g~Pl~~v~~v------~d~~~---ly~~lm~~Iv~la~~---GlIHgDFNEFNimv~d 237 (465)
T KOG2268|consen 174 VPKPIDHN----RHCVVMELVDGYPLRQVRHV------EDPPT---LYDDLMGLIVRLANH---GLIHGDFNEFNIMVKD 237 (465)
T ss_pred CCCccccc----ceeeHHHhhcccceeeeeec------CChHH---HHHHHHHHHHHHHHc---CceecccchheeEEec
Confidence 55555543 45789999988777654321 12222 333344445556666 9999999999999999
Q ss_pred CCcEEEeeeccc
Q 016009 267 EFEAHVADFGIA 278 (397)
Q Consensus 267 ~~~~kl~Dfg~~ 278 (397)
++.++++||--.
T Consensus 238 d~~i~vIDFPQm 249 (465)
T KOG2268|consen 238 DDKIVVIDFPQM 249 (465)
T ss_pred CCCEEEeechHh
Confidence 999999999644
No 483
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.28 E-value=0.0022 Score=57.54 Aligned_cols=73 Identities=22% Similarity=0.322 Sum_probs=48.0
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc---CCceeeeEEEEecCCeeeEEEEe
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR---HRNIVKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~ 206 (397)
.+.++.|....+|+.. .+++.+.||.-. ......|..|.+-|+.|. --.+++++++....+..+||+||
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~-------~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~ 93 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNS-------ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEF 93 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEE-------GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecC-------hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEe
Confidence 4558888899999987 577889999843 122457888999888883 44577889988877788999999
Q ss_pred ccCC
Q 016009 207 LKRG 210 (397)
Q Consensus 207 ~~~g 210 (397)
++.+
T Consensus 94 l~~~ 97 (288)
T PF03881_consen 94 LEMG 97 (288)
T ss_dssp ----
T ss_pred ecCC
Confidence 9876
No 484
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.27 E-value=0.0046 Score=55.40 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=25.7
Q ss_pred CCceeccCCCCcEEeCCCCc-EEEeeeccccc
Q 016009 250 PPIVHRDISSKNLLLDLEFE-AHVADFGIAKF 280 (397)
Q Consensus 250 ~~ivH~dlk~~Nill~~~~~-~kl~Dfg~~~~ 280 (397)
+.++|+|+.+.||++++++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 35899999999999997555 46999998764
No 485
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.19 E-value=0.0097 Score=55.75 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=50.7
Q ss_pred CccccccCcEEEEEEEeCCCCEEEEEecCCCCCCc-c--hhcHHHHHHHHHHHHhcc---CCceeeeEEEEecCCeeeEE
Q 016009 130 QYCIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSD-Q--IVDKKEFLTEVEALTEIR---HRNIVKLYGFCSHARHSFLV 203 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~-~--~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 203 (397)
.+.+|.|....||+.... +..++||.-....... . ......-..|.+.|+.+. ..++.+++.++. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 456899999999998764 4569999854222110 0 112344455677776663 247888888887 446789
Q ss_pred EEeccC
Q 016009 204 YEFLKR 209 (397)
Q Consensus 204 ~e~~~~ 209 (397)
|||+++
T Consensus 114 ME~L~~ 119 (418)
T PLN02756 114 MRYLEP 119 (418)
T ss_pred EeecCC
Confidence 999977
No 486
>PLN02236 choline kinase
Probab=97.15 E-value=0.0082 Score=55.71 Aligned_cols=139 Identities=19% Similarity=0.309 Sum_probs=78.9
Q ss_pred ccccCcEEEEEEEeCC-----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCce-eeeEEEEecCCeeeEEEEe
Q 016009 133 IGNGGHGSVYRAELPS-----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI-VKLYGFCSHARHSFLVYEF 206 (397)
Q Consensus 133 lg~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~ 206 (397)
+..|-...+|+....+ ++.|++|...... ... -.-.+|..+++.+...++ .++++.+..+ .|.||
T Consensus 44 l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~---idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~ef 114 (344)
T PLN02236 44 LKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELF---FDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEF 114 (344)
T ss_pred cCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--Cee---echHHHHHHHHHHHHcCCCCceEEEECCc----eEEEe
Confidence 4446667888886532 3678888765422 111 122578888888854333 3456665432 58999
Q ss_pred ccCCCHHHh-----------------hccccc--cC-CCCHHHHHHHHHHH-----------------HHHHHHH----H
Q 016009 207 LKRGSLAAI-----------------LSSDAA--AQ-ELGWSQRMNVIKGV-----------------ADALSYL----H 245 (397)
Q Consensus 207 ~~~g~L~~~-----------------l~~~~~--~~-~l~~~~~~~i~~~i-----------------~~~l~~L----h 245 (397)
+++.++... ++.... .. ...|.++.++..++ ...+..| .
T Consensus 115 i~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~ 194 (344)
T PLN02236 115 IHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELS 194 (344)
T ss_pred eCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhc
Confidence 987766421 111110 01 11233333333221 1112222 2
Q ss_pred h-CCCCCceeccCCCCcEEeCC-CCcEEEeeeccccc
Q 016009 246 H-DCFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKF 280 (397)
Q Consensus 246 ~-~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 280 (397)
. .....++|+|+++.||++++ ++.+.++||..+..
T Consensus 195 ~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 195 GDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred ccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1 12236899999999999986 46899999988864
No 487
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.13 E-value=0.01 Score=50.48 Aligned_cols=134 Identities=22% Similarity=0.278 Sum_probs=82.1
Q ss_pred cccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc---CCceeeeEEEEecCCeeeEEEEecc
Q 016009 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR---HRNIVKLYGFCSHARHSFLVYEFLK 208 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~ 208 (397)
.+.-|..-..|.... +..++.||.=. ......|..|+.-|..+. .-++.+++.+-....+.|+|+||++
T Consensus 23 ~v~gG~inea~~v~d-g~~~~FvK~n~-------~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~ 94 (286)
T COG3001 23 EVSGGDINEAWRLRD-GTDPFFVKCNQ-------REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLP 94 (286)
T ss_pred ccCCccccceeEeec-CCcceEEEecc-------hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeecc
Confidence 344444444444433 45789999732 223467888888777773 4568888888889999999999999
Q ss_pred CCCHHH--h---------hccccc---------------cCCCCHH---------HHHHHHHHH--------------HH
Q 016009 209 RGSLAA--I---------LSSDAA---------------AQELGWS---------QRMNVIKGV--------------AD 239 (397)
Q Consensus 209 ~g~L~~--~---------l~~~~~---------------~~~l~~~---------~~~~i~~~i--------------~~ 239 (397)
-|.+.. . |+.... .++-+|. +|+-+..++ +.
T Consensus 95 ~~~~d~~~~~~~GqqLA~LH~~~~~~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlqlar~rg~~f~did~~~~ 174 (286)
T COG3001 95 TGPLDAHSAFILGQQLARLHQWGGQAQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQLARERGLTFGDIDAIVE 174 (286)
T ss_pred CCCCCchhHHHHHHHHHHHHhhcCccccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHHHHHhCCCccCHHHHHH
Confidence 876651 1 111110 0111222 233333333 33
Q ss_pred HHHHHHhCCC--CCceeccCCCCcEEeCCCCcEEEee
Q 016009 240 ALSYLHHDCF--PPIVHRDISSKNLLLDLEFEAHVAD 274 (397)
Q Consensus 240 ~l~~Lh~~~~--~~ivH~dlk~~Nill~~~~~~kl~D 274 (397)
.+..+-..+. |..+|+||-..|..+..+| +.+-|
T Consensus 175 ~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fD 210 (286)
T COG3001 175 KIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFD 210 (286)
T ss_pred HHHHHHhcCCCCcceeecccccccccccCCC-Ceeec
Confidence 4444433333 6899999999999999998 66655
No 488
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.07 E-value=0.0077 Score=55.40 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=48.5
Q ss_pred cccccCcEEEEEEEeCCC-CEEEEEecCCCCC---CcchhcHHHHHHHHHHHHhcc--CCc-eeeeEEEEecCCeeeEEE
Q 016009 132 CIGNGGHGSVYRAELPSG-QVVAIKKFHSPLP---SDQIVDKKEFLTEVEALTEIR--HRN-IVKLYGFCSHARHSFLVY 204 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~-~~vavK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~--h~n-iv~~~~~~~~~~~~~lv~ 204 (397)
.||.|....||++..++| +.|+||.-..-.. ..-....++..-|.+.|+... -|. +++++. .++....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 479999999999987655 5899997542221 111233455667778887763 343 444443 3445567899
Q ss_pred EeccC
Q 016009 205 EFLKR 209 (397)
Q Consensus 205 e~~~~ 209 (397)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 99854
No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.89 E-value=0.019 Score=52.59 Aligned_cols=29 Identities=31% Similarity=0.387 Sum_probs=25.3
Q ss_pred CCceeccCCCCcEEeCCCCcEEEeeecccc
Q 016009 250 PPIVHRDISSKNLLLDLEFEAHVADFGIAK 279 (397)
Q Consensus 250 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 279 (397)
.+++|+|+.+.||+++. +.+.|.||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 47899999999999987 578999998664
No 490
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.82 E-value=0.00032 Score=36.09 Aligned_cols=18 Identities=39% Similarity=0.719 Sum_probs=16.3
Q ss_pred CCCEEecCCCcccccCCCC
Q 016009 3 GLSVIDISDNQLQGPVPNS 21 (397)
Q Consensus 3 ~L~~ldls~N~l~G~iP~~ 21 (397)
+|++||||+|+|+ .||..
T Consensus 1 ~L~~Ldls~n~l~-~ip~~ 18 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSS 18 (22)
T ss_dssp TESEEEETSSEES-EEGTT
T ss_pred CccEEECCCCcCE-eCChh
Confidence 5899999999999 99974
No 491
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.62 E-value=0.015 Score=54.23 Aligned_cols=78 Identities=19% Similarity=0.169 Sum_probs=51.0
Q ss_pred CccccccCcEEEEEEEeCC-CCEEEEEecCCCCC--CcchhcHHHHHHHHHHHHhcc--CCc-eeeeEEEEecCCeeeEE
Q 016009 130 QYCIGNGGHGSVYRAELPS-GQVVAIKKFHSPLP--SDQIVDKKEFLTEVEALTEIR--HRN-IVKLYGFCSHARHSFLV 203 (397)
Q Consensus 130 ~~~lg~G~~g~vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~~~~e~~~l~~l~--h~n-iv~~~~~~~~~~~~~lv 203 (397)
.+.||.|....||++..++ ++.|+||.-..-.. ..-....++..-|.+.|+... -|. +++++.+ ++....+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 4568999999999998753 56799997543222 111334566777888888763 454 4445433 44556788
Q ss_pred EEeccC
Q 016009 204 YEFLKR 209 (397)
Q Consensus 204 ~e~~~~ 209 (397)
||+++.
T Consensus 112 MEdL~~ 117 (409)
T PRK12396 112 MEDLSD 117 (409)
T ss_pred HHhCcc
Confidence 998854
No 492
>PLN03150 hypothetical protein; Provisional
Probab=96.58 E-value=0.0048 Score=61.99 Aligned_cols=36 Identities=31% Similarity=0.582 Sum_probs=22.8
Q ss_pred CCCCCEEecCCCcccccCCCC-CccccCCcccccCCC
Q 016009 1 MHGLSVIDISDNQLQGPVPNS-TAFRNASVEALEGNK 36 (397)
Q Consensus 1 l~~L~~ldls~N~l~G~iP~~-~~~~~~~~~~~~gN~ 36 (397)
|++|+.||||+|+|+|.||.. ..+.++....+.+|.
T Consensus 465 l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~ 501 (623)
T PLN03150 465 ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501 (623)
T ss_pred CCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCc
Confidence 456777777777777777763 234445555566664
No 493
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.51 E-value=0.046 Score=50.11 Aligned_cols=136 Identities=21% Similarity=0.280 Sum_probs=81.3
Q ss_pred CcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCc------eeeeEEE----EecCCeeeEEEEe
Q 016009 137 GHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRN------IVKLYGF----CSHARHSFLVYEF 206 (397)
Q Consensus 137 ~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~----~~~~~~~~lv~e~ 206 (397)
.-..+|+....+|+. ++|..... ....++..|...+..+.-.. +..+=|- ...+...+-+++|
T Consensus 37 ~eN~~f~~~~~~g~~-iLki~~~~------~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~ 109 (331)
T COG2334 37 EENSNFRVQTEDGRY-ILKIYRPG------WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEY 109 (331)
T ss_pred ccCceEEEEecCCCe-EEEEecCC------CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEe
Confidence 456789998877776 88887642 23567788888888883211 2222221 1222367789999
Q ss_pred ccCCCHHH-hh--------------c----cc----c-ccCCCCHHH-------------HHHHHHHHHHHHHHHHhCC-
Q 016009 207 LKRGSLAA-IL--------------S----SD----A-AAQELGWSQ-------------RMNVIKGVADALSYLHHDC- 248 (397)
Q Consensus 207 ~~~g~L~~-~l--------------~----~~----~-~~~~l~~~~-------------~~~i~~~i~~~l~~Lh~~~- 248 (397)
++|..+.. .. + .. . ......|.. ......++...+..+.+..
T Consensus 110 l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~ 189 (331)
T COG2334 110 LPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLP 189 (331)
T ss_pred cCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhch
Confidence 99988873 11 0 00 0 111234431 0112233444444444432
Q ss_pred ---CCC---ceeccCCCCcEEeCCCCc-EEEeeecccc
Q 016009 249 ---FPP---IVHRDISSKNLLLDLEFE-AHVADFGIAK 279 (397)
Q Consensus 249 ---~~~---ivH~dlk~~Nill~~~~~-~kl~Dfg~~~ 279 (397)
... +||+|+.|.||+++++.. ..+.||+-+.
T Consensus 190 ~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 190 AHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 123 899999999999999885 8999998775
No 494
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.45 E-value=0.039 Score=50.90 Aligned_cols=139 Identities=17% Similarity=0.261 Sum_probs=76.4
Q ss_pred ccccCcEEEEEEEeCC----CCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCce-eeeEEEEecCCeeeEEEEec
Q 016009 133 IGNGGHGSVYRAELPS----GQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNI-VKLYGFCSHARHSFLVYEFL 207 (397)
Q Consensus 133 lg~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~ 207 (397)
|..|-...+|+....+ +..|++|....... .. -.-.+|..+++.+..-++ .++++++.++ +|.+|+
T Consensus 22 l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~--~~---IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi 92 (330)
T PLN02421 22 ISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD--YV---IDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFI 92 (330)
T ss_pred eCCcccceEEEEEecCCCCCCceEEEEEecCCcC--eE---echHHHHHHHHHHHhcCCCCceeEEeCCc----Eeehhh
Confidence 4446667788886543 23788887654221 11 223578888888865444 3456655322 589999
Q ss_pred cCCCHHHh-----------------hccccc--cC-CCCHHHHHHHHHHH----------------------HHHHHHHH
Q 016009 208 KRGSLAAI-----------------LSSDAA--AQ-ELGWSQRMNVIKGV----------------------ADALSYLH 245 (397)
Q Consensus 208 ~~g~L~~~-----------------l~~~~~--~~-~l~~~~~~~i~~~i----------------------~~~l~~Lh 245 (397)
++..|..- ++.... .. .--|..+.++..++ ..-+..+.
T Consensus 93 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 172 (330)
T PLN02421 93 NARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELK 172 (330)
T ss_pred cCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHH
Confidence 87665321 111110 01 11233332222221 11122211
Q ss_pred ----hC-CCCCceeccCCCCcEEeCC-CCcEEEeeeccccc
Q 016009 246 ----HD-CFPPIVHRDISSKNLLLDL-EFEAHVADFGIAKF 280 (397)
Q Consensus 246 ----~~-~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 280 (397)
.. ...-.+|+|+.+.||++++ ++.++++||..+..
T Consensus 173 ~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 173 EITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred HHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 11 1123689999999999975 57899999998864
No 495
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.42 E-value=0.095 Score=48.25 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=45.5
Q ss_pred cCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCC--ceeeeE---E--EEecCCeeeEEEEecc
Q 016009 136 GGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHR--NIVKLY---G--FCSHARHSFLVYEFLK 208 (397)
Q Consensus 136 G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~---~--~~~~~~~~~lv~e~~~ 208 (397)
+.-..||+...++|..+++|..+... ....++..|.+.+..+... .++... | ....++..+.++++++
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~~-----~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~ 110 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPER-----WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRG 110 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCccc-----CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeC
Confidence 44577999988888889999865311 2356677888888777321 122211 1 1223456788999998
Q ss_pred CCCH
Q 016009 209 RGSL 212 (397)
Q Consensus 209 ~g~L 212 (397)
|...
T Consensus 111 G~~~ 114 (325)
T PRK11768 111 GRAP 114 (325)
T ss_pred CCCC
Confidence 7643
No 496
>PRK06148 hypothetical protein; Provisional
Probab=96.30 E-value=0.075 Score=56.59 Aligned_cols=141 Identities=17% Similarity=0.242 Sum_probs=78.3
Q ss_pred cccccCcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhcc-------CCceeeeE-E----EEec-CC
Q 016009 132 CIGNGGHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIR-------HRNIVKLY-G----FCSH-AR 198 (397)
Q Consensus 132 ~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-------h~niv~~~-~----~~~~-~~ 198 (397)
.|+ |..-.+|+....+|+.+++|+.+... .......|.+.|..+. -|.+++-. | .... ++
T Consensus 32 ~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~------~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G 104 (1013)
T PRK06148 32 PLD-GERDLNFRLTTDDGADYILKIVNPSE------PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDG 104 (1013)
T ss_pred ecC-CcCCceEEEEeCCCCeEEEEEcCCcc------chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCC
Confidence 454 45577899888888899999987521 1234445556666552 22333221 1 1111 12
Q ss_pred --eeeEEEEeccCCCHHHhhc---------------------c--c-cccCCCCHHH-----------------HHHHHH
Q 016009 199 --HSFLVYEFLKRGSLAAILS---------------------S--D-AAAQELGWSQ-----------------RMNVIK 235 (397)
Q Consensus 199 --~~~lv~e~~~~g~L~~~l~---------------------~--~-~~~~~l~~~~-----------------~~~i~~ 235 (397)
..+-+++|++|..+.+... . . ...+.+.|.. ...++.
T Consensus 105 ~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~ 184 (1013)
T PRK06148 105 EPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVE 184 (1013)
T ss_pred ceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHH
Confidence 4567899999987765110 0 0 0012233321 112222
Q ss_pred HHHHHHH-----HHHhCCCCCceeccCCCCcEEeCCCC--cEE-Eeeeccccc
Q 016009 236 GVADALS-----YLHHDCFPPIVHRDISSKNLLLDLEF--EAH-VADFGIAKF 280 (397)
Q Consensus 236 ~i~~~l~-----~Lh~~~~~~ivH~dlk~~Nill~~~~--~~k-l~Dfg~~~~ 280 (397)
++.+... .+.+ ....+||+|+.+.||+++.++ ++. |+|||.+..
T Consensus 185 ~~~~~~~~~v~p~l~~-Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 185 RFLARFERNVAPRLAA-LPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHHHHHhc-CCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 2322221 1222 234799999999999999875 454 999998753
No 497
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.24 E-value=0.014 Score=50.07 Aligned_cols=29 Identities=28% Similarity=0.472 Sum_probs=20.8
Q ss_pred CceeccCCCCcEEe-CCCCcEEEeeecccc
Q 016009 251 PIVHRDISSKNLLL-DLEFEAHVADFGIAK 279 (397)
Q Consensus 251 ~ivH~dlk~~Nill-~~~~~~kl~Dfg~~~ 279 (397)
.++|+|+.+.||++ +.++.++++||..+.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 57899999999999 888999999998875
No 498
>PTZ00384 choline kinase; Provisional
Probab=96.16 E-value=0.039 Score=51.80 Aligned_cols=29 Identities=28% Similarity=0.282 Sum_probs=24.4
Q ss_pred CceeccCCCCcEEeCCCCcEEEeeeccccc
Q 016009 251 PIVHRDISSKNLLLDLEFEAHVADFGIAKF 280 (397)
Q Consensus 251 ~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 280 (397)
..+|.|+-+.||+.+++ .+.++||..+..
T Consensus 228 VfCHNDL~~gNIL~~~~-~l~lID~EYA~~ 256 (383)
T PTZ00384 228 LFCHNDLFFTNILDFNQ-GIYFIDFDFAGF 256 (383)
T ss_pred eeeeccCCcccEEecCC-CEEEEEeccccC
Confidence 57899999999997654 699999988764
No 499
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.83 E-value=0.08 Score=44.99 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=87.4
Q ss_pred CcEEEEEEEeCCCCEEEEEecCCCCCCcchhcHHHHHHHHHHHHhccCCceeeeEEEEecCCeeeEEEEeccCCCHHHhh
Q 016009 137 GHGSVYRAELPSGQVVAIKKFHSPLPSDQIVDKKEFLTEVEALTEIRHRNIVKLYGFCSHARHSFLVYEFLKRGSLAAIL 216 (397)
Q Consensus 137 ~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l 216 (397)
+-.+.-.+..+-| +..+|++....- .....-|..+.+++++++ .|+++..= +....-++.|+|..-.
T Consensus 74 gNsTl~~~kt~iG-~L~lKKi~slp~---~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~----- 140 (308)
T PF07387_consen 74 GNSTLLIGKTKIG-PLFLKKIRSLPC---CINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIK----- 140 (308)
T ss_pred CceEEEEeccccc-hhhhhhccCCCc---ccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCcc-----
Confidence 3344444433333 456666653111 112355678888888885 46666621 3334568889874311
Q ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCcEEeCCCCcEEEeeeccccccCCCCCCccccccccc
Q 016009 217 SSDAAAQELGWSQRMNVIKGVADALSYLHHDCFPPIVHRDISSKNLLLDLEFEAHVADFGIAKFLKPDSSNWTEFAGTYG 296 (397)
Q Consensus 217 ~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~ 296 (397)
....-.|..+ ..+|.-.|+.. .+.+|+|-.|+||+-|..|.+||.|-+.-- + .+..
T Consensus 141 ----------i~~~N~i~ag-i~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll--~----------~~V~ 196 (308)
T PF07387_consen 141 ----------INFSNFITAG-IKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCLL--E----------NQVN 196 (308)
T ss_pred ----------cchhHHHHHh-HHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhhhh--h----------heee
Confidence 0111122222 35677788654 389999999999999999999999976432 1 0111
Q ss_pred ccCcccccCCCCCcchhhHHHHHHHHHHHhC
Q 016009 297 YVAPELAYTMKITEKCDVYSFGVLALEVIKG 327 (397)
Q Consensus 297 y~aPE~~~~~~~~~~~Dv~s~G~~l~el~tg 327 (397)
|.--|+ ...|+++.+-+|=.-++++...
T Consensus 197 ~vN~~Y---~~lT~~aE~~~fv~s~l~~v~~ 224 (308)
T PF07387_consen 197 MVNIEY---ESLTQEAEVKVFVKSCLKLVEK 224 (308)
T ss_pred EEeeec---cccChHHHHHHHHHHHHHHHHH
Confidence 222111 2346777777777777777663
No 500
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.72 E-value=0.0062 Score=28.96 Aligned_cols=14 Identities=36% Similarity=0.646 Sum_probs=10.0
Q ss_pred CCCCEEecCCCccc
Q 016009 2 HGLSVIDISDNQLQ 15 (397)
Q Consensus 2 ~~L~~ldls~N~l~ 15 (397)
++|+.||||+|+|+
T Consensus 1 ~~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 1 PNLRTLDLSNNRLT 14 (17)
T ss_dssp TT-SEEEETSS--S
T ss_pred CccCEEECCCCCCC
Confidence 57999999999986
Done!