Query 016010
Match_columns 397
No_of_seqs 215 out of 1439
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 02:58:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016010.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016010hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1.8E-95 4E-100 744.6 28.8 321 75-397 25-354 (454)
2 PLN02209 serine carboxypeptida 100.0 1.1E-76 2.4E-81 609.0 30.3 309 75-395 20-341 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2.7E-76 5.8E-81 605.8 28.2 305 76-394 19-336 (433)
4 PF00450 Peptidase_S10: Serine 100.0 2.3E-76 5.1E-81 597.8 23.0 295 84-383 1-306 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.1E-70 2.4E-75 569.2 28.0 289 82-389 35-347 (462)
6 COG2939 Carboxypeptidase C (ca 100.0 9.8E-52 2.1E-56 420.3 17.8 279 91-388 73-379 (498)
7 PLN02213 sinapoylglucose-malat 100.0 5.8E-48 1.3E-52 382.6 19.0 206 168-384 1-214 (319)
8 KOG1283 Serine carboxypeptidas 100.0 2.2E-43 4.7E-48 339.9 10.8 282 95-386 4-305 (414)
9 TIGR03611 RutD pyrimidine util 98.3 6.1E-06 1.3E-10 76.0 10.2 116 110-267 2-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 98.3 5.9E-06 1.3E-10 77.1 10.1 131 94-266 2-132 (288)
11 PRK00870 haloalkane dehalogena 98.1 8.3E-05 1.8E-09 72.4 14.5 140 76-264 7-149 (302)
12 TIGR03056 bchO_mg_che_rel puta 98.0 7.9E-05 1.7E-09 70.1 11.6 109 120-268 25-133 (278)
13 PHA02857 monoglyceride lipase; 98.0 6.3E-05 1.4E-09 71.8 11.0 125 105-267 9-134 (276)
14 PLN02824 hydrolase, alpha/beta 97.8 0.00017 3.7E-09 69.7 11.4 123 98-265 12-137 (294)
15 PRK10673 acyl-CoA esterase; Pr 97.8 0.00018 3.9E-09 67.3 10.2 104 118-263 11-114 (255)
16 TIGR01249 pro_imino_pep_1 prol 97.8 0.00022 4.7E-09 69.9 11.1 126 96-266 6-131 (306)
17 PLN02385 hydrolase; alpha/beta 97.7 0.00044 9.4E-09 69.1 11.8 128 105-266 70-198 (349)
18 COG1506 DAP2 Dipeptidyl aminop 97.6 0.00019 4.1E-09 77.8 9.0 139 98-270 367-512 (620)
19 PF10340 DUF2424: Protein of u 97.6 0.00014 2.9E-09 74.1 7.3 131 109-268 106-238 (374)
20 PF12697 Abhydrolase_6: Alpha/ 97.6 0.00025 5.4E-09 63.1 8.3 104 126-268 1-104 (228)
21 PRK03592 haloalkane dehalogena 97.5 0.00071 1.5E-08 65.4 11.0 115 106-267 16-130 (295)
22 PLN02298 hydrolase, alpha/beta 97.5 0.001 2.2E-08 65.7 11.9 137 96-267 34-171 (330)
23 PRK03204 haloalkane dehalogena 97.5 0.0012 2.6E-08 64.2 12.1 121 96-265 16-136 (286)
24 PRK05077 frsA fermentation/res 97.5 0.00084 1.8E-08 69.4 11.6 131 98-267 170-302 (414)
25 TIGR03695 menH_SHCHC 2-succiny 97.4 0.00081 1.8E-08 60.7 8.9 106 123-266 1-106 (251)
26 TIGR02240 PHA_depoly_arom poly 97.4 0.0013 2.8E-08 63.0 10.7 118 105-266 10-127 (276)
27 PRK11126 2-succinyl-6-hydroxy- 97.4 0.00086 1.9E-08 62.3 9.1 101 123-265 2-102 (242)
28 PLN02894 hydrolase, alpha/beta 97.3 0.0031 6.7E-08 64.8 12.5 120 107-265 92-211 (402)
29 TIGR03343 biphenyl_bphD 2-hydr 97.2 0.0019 4.1E-08 61.4 9.8 106 122-264 29-135 (282)
30 PLN02652 hydrolase; alpha/beta 97.2 0.0043 9.3E-08 63.8 12.5 130 104-267 118-247 (395)
31 PLN02578 hydrolase 97.1 0.0032 6.9E-08 63.2 10.3 112 106-264 75-186 (354)
32 PLN02679 hydrolase, alpha/beta 97.1 0.0046 1E-07 62.3 11.2 105 122-265 87-191 (360)
33 TIGR02821 fghA_ester_D S-formy 97.1 0.0098 2.1E-07 57.6 13.0 53 205-268 123-176 (275)
34 PRK14875 acetoin dehydrogenase 97.1 0.0048 1E-07 61.2 11.0 103 121-264 129-231 (371)
35 PLN02211 methyl indole-3-aceta 97.1 0.0036 7.8E-08 60.7 9.8 107 121-265 16-122 (273)
36 TIGR02427 protocat_pcaD 3-oxoa 97.0 0.0046 9.9E-08 56.0 9.8 89 121-240 11-99 (251)
37 PLN03084 alpha/beta hydrolase 97.0 0.0076 1.6E-07 61.8 11.9 133 91-266 101-233 (383)
38 PRK10349 carboxylesterase BioH 96.9 0.004 8.6E-08 58.7 8.8 95 124-264 14-108 (256)
39 PRK10749 lysophospholipase L2; 96.9 0.0069 1.5E-07 60.2 10.6 127 105-266 39-167 (330)
40 TIGR01738 bioH putative pimelo 96.9 0.004 8.7E-08 56.3 8.1 97 123-265 4-100 (245)
41 PLN03087 BODYGUARD 1 domain co 96.8 0.013 2.9E-07 61.8 11.9 134 91-264 173-308 (481)
42 PRK08775 homoserine O-acetyltr 96.7 0.0075 1.6E-07 60.1 9.3 76 167-266 98-174 (343)
43 PLN02442 S-formylglutathione h 96.7 0.02 4.3E-07 55.9 12.0 55 201-268 127-181 (283)
44 PRK06489 hypothetical protein; 96.7 0.012 2.5E-07 59.3 10.3 131 106-264 49-188 (360)
45 COG0596 MhpC Predicted hydrola 96.6 0.017 3.8E-07 51.2 10.1 104 123-266 21-124 (282)
46 TIGR01840 esterase_phb esteras 96.6 0.012 2.6E-07 54.5 9.1 54 201-265 77-130 (212)
47 KOG4409 Predicted hydrolase/ac 96.5 0.024 5.1E-07 57.2 10.8 132 96-268 67-198 (365)
48 PRK05855 short chain dehydroge 96.5 0.016 3.5E-07 60.9 10.2 98 105-234 11-108 (582)
49 PLN02965 Probable pheophorbida 96.4 0.013 2.8E-07 55.5 8.5 100 126-264 6-106 (255)
50 PRK10566 esterase; Provisional 96.4 0.022 4.7E-07 53.4 9.7 99 120-239 24-126 (249)
51 TIGR03101 hydr2_PEP hydrolase, 96.3 0.049 1.1E-06 53.2 11.6 126 106-269 9-138 (266)
52 TIGR03100 hydr1_PEP hydrolase, 96.0 0.046 9.9E-07 52.9 9.7 79 169-267 58-136 (274)
53 COG3509 LpqC Poly(3-hydroxybut 95.9 0.067 1.5E-06 52.9 10.6 146 106-286 44-202 (312)
54 cd00707 Pancreat_lipase_like P 95.9 0.0081 1.7E-07 58.7 4.3 112 120-264 33-146 (275)
55 KOG2564 Predicted acetyltransf 95.9 0.023 5.1E-07 55.8 7.2 112 121-267 72-184 (343)
56 KOG1515 Arylacetamide deacetyl 95.9 0.091 2E-06 53.1 11.6 146 95-269 62-211 (336)
57 PLN02980 2-oxoglutarate decarb 95.8 0.058 1.3E-06 64.9 11.5 108 119-264 1367-1479(1655)
58 PRK00175 metX homoserine O-ace 95.7 0.082 1.8E-06 53.7 10.8 133 106-265 32-182 (379)
59 PRK07581 hypothetical protein; 95.6 0.077 1.7E-06 52.5 9.7 130 106-265 25-159 (339)
60 PRK10985 putative hydrolase; P 95.5 0.079 1.7E-06 52.5 9.6 128 106-266 41-169 (324)
61 PF00561 Abhydrolase_1: alpha/ 95.5 0.024 5.2E-07 51.3 5.4 77 170-264 2-78 (230)
62 TIGR01607 PST-A Plasmodium sub 95.4 0.19 4.2E-06 50.2 12.0 154 104-266 5-186 (332)
63 PLN02511 hydrolase 95.4 0.15 3.2E-06 52.2 11.4 134 98-266 75-211 (388)
64 PLN00021 chlorophyllase 95.3 0.071 1.5E-06 53.2 8.3 116 120-267 49-168 (313)
65 TIGR00976 /NonD putative hydro 95.3 0.052 1.1E-06 58.0 7.8 131 104-268 4-135 (550)
66 PRK10162 acetyl esterase; Prov 95.3 0.16 3.5E-06 50.4 10.8 63 200-267 135-197 (318)
67 TIGR03230 lipo_lipase lipoprot 94.8 0.11 2.3E-06 54.5 8.3 81 168-264 73-153 (442)
68 KOG1455 Lysophospholipase [Lip 94.6 0.21 4.5E-06 49.6 9.2 129 105-265 36-164 (313)
69 PRK10115 protease 2; Provision 94.4 0.072 1.6E-06 58.7 6.3 143 97-270 417-564 (686)
70 PF00326 Peptidase_S9: Prolyl 94.2 0.06 1.3E-06 49.6 4.4 92 168-271 14-105 (213)
71 KOG4178 Soluble epoxide hydrol 93.9 0.42 9.2E-06 47.9 9.9 138 92-270 20-158 (322)
72 KOG2100 Dipeptidyl aminopeptid 93.8 0.27 5.7E-06 54.9 9.3 137 106-269 507-648 (755)
73 KOG4391 Predicted alpha/beta h 92.6 0.32 6.9E-06 46.5 6.4 124 107-269 65-188 (300)
74 PRK11460 putative hydrolase; P 92.3 0.84 1.8E-05 43.2 9.1 24 216-239 99-122 (232)
75 PF00975 Thioesterase: Thioest 92.2 1 2.2E-05 41.5 9.3 102 125-265 2-104 (229)
76 PF10230 DUF2305: Uncharacteri 92.2 1.3 2.7E-05 43.1 10.3 121 123-269 2-126 (266)
77 COG2267 PldB Lysophospholipase 92.1 1.4 3.1E-05 43.5 10.8 138 94-269 9-146 (298)
78 cd00312 Esterase_lipase Estera 90.5 1.2 2.6E-05 46.5 8.9 39 199-238 156-194 (493)
79 PF10503 Esterase_phd: Esteras 90.4 2.2 4.7E-05 40.6 9.7 53 204-266 81-133 (220)
80 KOG1838 Alpha/beta hydrolase [ 89.5 3 6.4E-05 43.3 10.4 132 97-265 96-236 (409)
81 PF12695 Abhydrolase_5: Alpha/ 89.4 0.89 1.9E-05 38.3 5.7 94 125-264 1-94 (145)
82 TIGR01392 homoserO_Ac_trn homo 88.6 4.6 0.0001 40.2 11.1 140 105-265 14-162 (351)
83 PF02230 Abhydrolase_2: Phosph 88.4 0.67 1.4E-05 43.0 4.6 60 198-269 85-144 (216)
84 PRK05371 x-prolyl-dipeptidyl a 88.2 1.2 2.5E-05 50.0 7.0 83 167-266 278-374 (767)
85 PF05990 DUF900: Alpha/beta hy 88.1 0.8 1.7E-05 43.7 5.0 74 195-269 67-141 (233)
86 KOG1454 Predicted hydrolase/ac 88.0 2.4 5.1E-05 42.6 8.6 96 121-244 56-152 (326)
87 PF06500 DUF1100: Alpha/beta h 87.8 0.36 7.8E-06 50.0 2.5 82 168-268 218-299 (411)
88 KOG3975 Uncharacterized conser 87.3 1.9 4.2E-05 42.0 6.9 102 121-246 27-132 (301)
89 COG0657 Aes Esterase/lipase [L 86.9 5.8 0.00013 38.8 10.5 63 200-269 133-195 (312)
90 PF02129 Peptidase_S15: X-Pro 86.1 1.2 2.5E-05 43.0 5.0 83 169-269 58-140 (272)
91 PRK11071 esterase YqiA; Provis 86.0 2.3 5E-05 39.0 6.7 48 204-267 48-95 (190)
92 PF07859 Abhydrolase_3: alpha/ 85.9 0.79 1.7E-05 41.7 3.5 61 200-267 52-112 (211)
93 PF05577 Peptidase_S28: Serine 85.8 3.6 7.8E-05 42.5 8.7 99 168-277 59-160 (434)
94 PF01764 Lipase_3: Lipase (cla 85.0 2.1 4.6E-05 36.4 5.6 62 199-266 46-107 (140)
95 COG0400 Predicted esterase [Ge 84.7 5 0.00011 37.8 8.3 148 109-283 5-155 (207)
96 PLN02872 triacylglycerol lipas 84.5 2.3 5E-05 43.9 6.5 97 121-234 72-174 (395)
97 COG4099 Predicted peptidase [G 84.2 15 0.00033 36.9 11.6 133 104-266 169-305 (387)
98 PRK13604 luxD acyl transferase 84.0 9.9 0.00021 38.1 10.5 124 105-266 18-142 (307)
99 cd00741 Lipase Lipase. Lipase 83.2 2.4 5.3E-05 37.0 5.3 43 199-244 10-52 (153)
100 PLN02454 triacylglycerol lipas 82.1 3.7 8E-05 42.7 6.8 68 197-267 206-273 (414)
101 PF11288 DUF3089: Protein of u 79.8 2.4 5.1E-05 40.1 4.1 44 199-244 76-119 (207)
102 PF11144 DUF2920: Protein of u 79.3 3.8 8.3E-05 42.4 5.8 62 197-268 160-222 (403)
103 cd00519 Lipase_3 Lipase (class 79.0 4.6 9.9E-05 37.8 5.9 59 201-267 112-170 (229)
104 PF00151 Lipase: Lipase; Inte 76.2 0.77 1.7E-05 46.3 -0.3 70 168-243 104-173 (331)
105 PF05728 UPF0227: Uncharacteri 75.9 2.6 5.7E-05 39.0 3.2 52 204-271 46-97 (187)
106 PF06057 VirJ: Bacterial virul 75.6 5.4 0.00012 37.3 5.1 65 195-268 46-110 (192)
107 PRK10252 entF enterobactin syn 75.0 23 0.00049 41.5 11.3 103 123-264 1068-1170(1296)
108 PLN02733 phosphatidylcholine-s 72.9 5.5 0.00012 41.8 5.0 39 198-239 143-181 (440)
109 PRK10439 enterobactin/ferric e 71.2 22 0.00049 36.8 9.1 36 220-265 288-323 (411)
110 PF03283 PAE: Pectinacetyleste 71.2 39 0.00085 34.5 10.7 151 107-267 35-199 (361)
111 PLN02571 triacylglycerol lipas 69.8 13 0.00028 38.7 6.9 69 198-267 205-277 (413)
112 PLN02753 triacylglycerol lipas 65.4 17 0.00037 39.0 6.8 73 195-267 285-361 (531)
113 PF05677 DUF818: Chlamydia CHL 65.3 15 0.00033 37.4 6.1 61 167-236 170-231 (365)
114 PLN02719 triacylglycerol lipas 63.9 18 0.00039 38.7 6.6 71 197-267 273-347 (518)
115 PRK06765 homoserine O-acetyltr 63.4 12 0.00026 38.6 5.1 51 201-264 144-195 (389)
116 PF07819 PGAP1: PGAP1-like pro 63.2 45 0.00098 31.5 8.7 65 198-269 61-128 (225)
117 PF05448 AXE1: Acetyl xylan es 63.1 27 0.00058 35.1 7.5 146 104-267 64-211 (320)
118 PF08237 PE-PPE: PE-PPE domain 62.8 28 0.0006 33.2 7.2 87 170-265 4-90 (225)
119 PRK14566 triosephosphate isome 62.8 20 0.00042 35.1 6.2 61 197-268 188-248 (260)
120 KOG1552 Predicted alpha/beta h 62.7 22 0.00047 34.8 6.4 109 121-269 58-167 (258)
121 PF10081 Abhydrolase_9: Alpha/ 61.9 18 0.00038 35.9 5.7 37 196-232 85-121 (289)
122 PRK14567 triosephosphate isome 60.1 24 0.00052 34.4 6.3 61 197-268 178-238 (253)
123 COG0627 Predicted esterase [Ge 59.8 38 0.00083 34.0 7.9 129 122-268 52-190 (316)
124 PLN03082 Iron-sulfur cluster a 58.2 5.1 0.00011 36.4 1.2 66 121-187 76-148 (163)
125 KOG3101 Esterase D [General fu 57.8 1.1E+02 0.0024 29.6 9.9 156 92-269 7-180 (283)
126 COG4425 Predicted membrane pro 57.1 20 0.00044 37.8 5.4 36 197-232 374-409 (588)
127 PLN02847 triacylglycerol lipas 56.9 20 0.00044 39.1 5.6 63 192-262 222-288 (633)
128 COG2945 Predicted hydrolase of 56.3 11 0.00025 35.4 3.2 57 177-241 68-124 (210)
129 KOG4627 Kynurenine formamidase 53.9 18 0.00039 34.6 4.1 72 179-266 102-173 (270)
130 COG2272 PnbA Carboxylesterase 52.8 1E+02 0.0022 32.9 9.9 32 204-236 165-196 (491)
131 PF11187 DUF2974: Protein of u 52.3 19 0.0004 34.3 4.1 39 201-243 69-107 (224)
132 smart00824 PKS_TE Thioesterase 51.5 82 0.0018 27.4 8.0 76 168-263 25-100 (212)
133 PLN02324 triacylglycerol lipas 50.9 43 0.00093 35.0 6.7 70 197-267 193-267 (415)
134 PLN02802 triacylglycerol lipas 50.4 35 0.00076 36.5 6.0 65 198-267 309-373 (509)
135 TIGR01911 HesB_rel_seleno HesB 50.3 12 0.00027 30.5 2.2 58 125-183 28-90 (92)
136 PF00756 Esterase: Putative es 50.1 52 0.0011 30.6 6.7 55 203-268 98-153 (251)
137 TIGR03502 lipase_Pla1_cef extr 49.1 72 0.0016 36.1 8.6 45 195-240 521-575 (792)
138 KOG2183 Prolylcarboxypeptidase 49.0 30 0.00065 36.3 5.1 62 168-233 111-180 (492)
139 COG0429 Predicted hydrolase of 48.9 2.6E+02 0.0056 28.6 11.6 123 107-264 61-185 (345)
140 KOG1553 Predicted alpha/beta h 48.9 38 0.00083 34.8 5.8 62 190-268 286-347 (517)
141 PRK04940 hypothetical protein; 48.8 18 0.00039 33.4 3.3 40 220-272 60-99 (180)
142 PLN02761 lipase class 3 family 48.6 46 0.001 35.8 6.6 71 197-267 268-344 (527)
143 PF07849 DUF1641: Protein of u 48.6 6.2 0.00014 27.6 0.1 18 354-371 14-31 (42)
144 PF08840 BAAT_C: BAAT / Acyl-C 48.4 13 0.00027 34.9 2.2 35 207-241 9-43 (213)
145 PLN02408 phospholipase A1 48.0 44 0.00095 34.4 6.2 65 198-267 179-243 (365)
146 PLN02561 triosephosphate isome 48.0 42 0.00092 32.7 5.8 59 198-267 180-239 (253)
147 KOG2281 Dipeptidyl aminopeptid 46.7 1.3E+02 0.0028 33.5 9.5 126 107-269 623-766 (867)
148 PLN02429 triosephosphate isome 46.4 47 0.001 33.4 6.0 60 198-268 239-299 (315)
149 KOG3079 Uridylate kinase/adeny 45.1 12 0.00026 34.9 1.5 16 121-136 5-20 (195)
150 TIGR01836 PHA_synth_III_C poly 43.4 35 0.00077 33.9 4.7 53 203-268 122-174 (350)
151 PLN00413 triacylglycerol lipas 42.6 29 0.00064 36.8 4.0 39 202-243 269-307 (479)
152 PLN02934 triacylglycerol lipas 40.8 42 0.00091 36.0 4.9 41 201-244 305-345 (515)
153 PF06259 Abhydrolase_8: Alpha/ 39.6 73 0.0016 29.3 5.7 66 167-240 62-129 (177)
154 PF05057 DUF676: Putative seri 39.5 67 0.0015 30.0 5.7 74 195-269 54-130 (217)
155 KOG4569 Predicted lipase [Lipi 39.3 60 0.0013 32.7 5.6 60 202-267 156-215 (336)
156 PF12146 Hydrolase_4: Putative 39.0 1.8E+02 0.004 22.7 7.3 79 106-208 1-79 (79)
157 cd00311 TIM Triosephosphate is 38.5 92 0.002 30.1 6.5 59 198-268 176-235 (242)
158 PLN02162 triacylglycerol lipas 37.8 45 0.00098 35.4 4.5 39 202-243 263-301 (475)
159 PRK09504 sufA iron-sulfur clus 37.8 23 0.00051 30.4 2.1 63 124-187 40-108 (122)
160 PF12740 Chlorophyllase2: Chlo 37.6 2.2E+02 0.0047 27.9 9.0 40 221-265 92-131 (259)
161 PRK09502 iscA iron-sulfur clus 37.1 27 0.00058 29.2 2.3 64 124-188 25-94 (107)
162 KOG2984 Predicted hydrolase [G 37.0 61 0.0013 31.0 4.8 91 124-239 43-133 (277)
163 PF15253 STIL_N: SCL-interrupt 36.8 37 0.0008 35.4 3.6 36 93-131 199-235 (410)
164 COG4757 Predicted alpha/beta h 36.6 74 0.0016 31.1 5.4 125 169-299 58-196 (281)
165 PTZ00333 triosephosphate isome 36.2 87 0.0019 30.5 6.0 60 197-267 182-242 (255)
166 PRK11190 Fe/S biogenesis prote 35.9 30 0.00064 32.3 2.6 64 125-189 25-96 (192)
167 KOG2182 Hydrolytic enzymes of 35.5 1.4E+02 0.003 32.0 7.6 65 169-234 119-186 (514)
168 PRK00042 tpiA triosephosphate 35.2 1.2E+02 0.0025 29.5 6.6 59 198-268 180-239 (250)
169 COG4782 Uncharacterized protei 35.0 55 0.0012 33.6 4.5 119 120-269 113-238 (377)
170 PF06342 DUF1057: Alpha/beta h 34.9 89 0.0019 31.2 5.8 103 120-264 32-136 (297)
171 PLN02310 triacylglycerol lipas 34.9 81 0.0017 32.9 5.8 65 198-267 186-251 (405)
172 PLN03037 lipase class 3 family 34.5 87 0.0019 33.7 6.0 65 199-267 296-361 (525)
173 PF06821 Ser_hydrolase: Serine 33.1 34 0.00074 31.0 2.5 39 219-266 54-92 (171)
174 PF02450 LCAT: Lecithin:choles 32.1 36 0.00077 35.0 2.7 38 201-242 104-141 (389)
175 COG0529 CysC Adenylylsulfate k 31.7 46 0.00099 31.1 3.0 24 120-144 19-44 (197)
176 PF01083 Cutinase: Cutinase; 31.6 55 0.0012 29.8 3.6 85 170-269 41-127 (179)
177 COG5510 Predicted small secret 30.9 65 0.0014 22.9 3.0 13 1-13 2-14 (44)
178 TIGR01838 PHA_synth_I poly(R)- 30.8 2.4E+02 0.0053 30.4 8.8 85 169-268 221-305 (532)
179 COG3896 Chloramphenicol 3-O-ph 30.6 40 0.00087 31.0 2.4 28 122-150 21-52 (205)
180 PRK10081 entericidin B membran 30.2 63 0.0014 23.5 2.9 11 1-11 2-12 (48)
181 PF03583 LIP: Secretory lipase 30.0 1.4E+02 0.003 29.4 6.3 65 198-267 46-115 (290)
182 TIGR02011 IscA iron-sulfur clu 29.2 34 0.00074 28.3 1.7 64 123-187 22-91 (105)
183 PF07519 Tannase: Tannase and 29.0 59 0.0013 34.5 3.8 59 198-270 97-155 (474)
184 PF04414 tRNA_deacylase: D-ami 28.9 1.3E+02 0.0029 28.5 5.8 47 195-244 105-152 (213)
185 PF00681 Plectin: Plectin repe 27.7 27 0.00058 24.5 0.7 32 262-293 11-42 (45)
186 PF08538 DUF1749: Protein of u 27.3 1.3E+02 0.0028 30.2 5.6 70 195-270 82-153 (303)
187 COG3673 Uncharacterized conser 26.5 64 0.0014 32.9 3.3 68 168-241 65-143 (423)
188 PRK13962 bifunctional phosphog 26.4 1.3E+02 0.0028 33.4 5.8 61 197-268 574-635 (645)
189 COG2819 Predicted hydrolase of 26.3 5.2E+02 0.011 25.4 9.4 35 200-235 113-152 (264)
190 PRK06762 hypothetical protein; 26.3 39 0.00084 29.6 1.6 13 124-136 2-14 (166)
191 PF07389 DUF1500: Protein of u 26.0 53 0.0011 26.9 2.1 27 202-230 8-34 (100)
192 TIGR03712 acc_sec_asp2 accesso 25.5 4.5E+02 0.0098 28.3 9.4 115 108-268 277-393 (511)
193 PF00121 TIM: Triosephosphate 25.5 39 0.00085 32.6 1.6 61 197-268 177-238 (244)
194 PF06309 Torsin: Torsin; Inte 24.8 58 0.0013 28.5 2.3 17 120-136 49-65 (127)
195 PF03403 PAF-AH_p_II: Platelet 24.1 50 0.0011 33.9 2.1 37 221-268 229-265 (379)
196 KOG1516 Carboxylesterase and r 22.6 3.2E+02 0.007 28.8 8.0 35 203-238 179-213 (545)
197 PRK03995 hypothetical protein; 22.2 1.5E+02 0.0033 29.1 5.0 47 195-244 157-203 (267)
198 PF01738 DLH: Dienelactone hyd 22.0 65 0.0014 29.4 2.3 35 205-239 83-117 (218)
199 PRK14565 triosephosphate isome 22.0 1.6E+02 0.0034 28.5 4.9 53 197-268 173-225 (237)
200 PF13974 YebO: YebO-like prote 21.9 1.7E+02 0.0036 23.6 4.2 31 4-38 6-36 (80)
201 TIGR03341 YhgI_GntY IscR-regul 21.9 1.1E+02 0.0025 28.3 3.8 64 124-188 23-94 (190)
202 PRK15492 triosephosphate isome 21.8 2.2E+02 0.0048 27.8 6.0 59 198-268 189-248 (260)
203 PRK07868 acyl-CoA synthetase; 21.3 2.7E+02 0.0059 32.2 7.6 40 219-267 140-179 (994)
204 TIGR01997 sufA_proteo FeS asse 21.2 76 0.0016 26.4 2.3 62 125-187 26-93 (107)
205 PF01583 APS_kinase: Adenylyls 20.4 58 0.0013 29.3 1.5 14 123-136 1-14 (156)
206 PF09292 Neil1-DNA_bind: Endon 20.4 59 0.0013 22.4 1.2 11 124-134 25-35 (39)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-95 Score=744.62 Aligned_cols=321 Identities=49% Similarity=0.873 Sum_probs=293.3
Q ss_pred cccCccccCCCCCCCCCceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCC
Q 016010 75 MLADKIKWLPGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKD 154 (397)
Q Consensus 75 ~~~~~v~~Lpg~~~~~~~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~ 154 (397)
+++|+|+.|||++.+++|+||||||+|++..+++||||||||+.+|+++||||||||||||||++ |+|.|+|||+|+.|
T Consensus 25 ~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~ 103 (454)
T KOG1282|consen 25 DEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYN 103 (454)
T ss_pred chhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCC
Confidence 67789999999998899999999999999999999999999999999999999999999999997 99999999999999
Q ss_pred CCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccc
Q 016010 155 GKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYV 234 (397)
Q Consensus 155 ~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yv 234 (397)
|++|+.||||||+.|||||||||+||||||+++++|+. .+|+.+|+|++.||++||++||||++|||||+|||||||||
T Consensus 104 G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YV 182 (454)
T KOG1282|consen 104 GKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYV 182 (454)
T ss_pred CCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceeh
Confidence 99999999999999999999999999999999999887 59999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccCCCCceeeeeeeEeeccccCCcccccchhhhhhhccCCChHhHhchhccccccc-----CCCChhHHH
Q 016010 235 PQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR-----EGNDTKECE 309 (397)
Q Consensus 235 P~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~q~~~~~~f~~~~glIs~~~~~~i~~~C~~~~-----~~~~~~~C~ 309 (397)
|+||++|+++|+....+.|||||++||||++|+..|..++++|+|.||+||+++++.+++.|++.. ....+.+|.
T Consensus 183 P~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~ 262 (454)
T KOG1282|consen 183 PALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCN 262 (454)
T ss_pred HHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHH
Confidence 999999999998655678999999999999999999999999999999999999999999998741 123467899
Q ss_pred HHHHHHH-hhcCCCccccCCcccCCCCCCCCCCCCCCCCCCCCchhHHhhhCCcHHHHHHhCCCCC---Cccccchhhhh
Q 016010 310 TFLEKAS-DEIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTDYYVEAYLNTREVQTVLHVKPT---NWTACRYVYRT 385 (397)
Q Consensus 310 ~a~~~~~-~~~g~in~YnI~~p~C~~~~~~~~~~~~~~~~dpC~~~~~~~YLN~pdVqkALhv~~~---~W~~Cs~~v~~ 385 (397)
++++... ...++|+.|+|+.+.|...............+++|.+++.+.|||+|+||+||||+.+ +|+.||+.|..
T Consensus 263 ~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~~ 342 (454)
T KOG1282|consen 263 KAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVNY 342 (454)
T ss_pred HHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhhc
Confidence 9999888 5667999999999999862211000112457899999888999999999999999987 49999999999
Q ss_pred ccccCCCCcccC
Q 016010 386 QFKYTLKTFVPI 397 (397)
Q Consensus 386 ~~~ds~~s~lp~ 397 (397)
+|++...+|+|+
T Consensus 343 ~~~~~~~sm~p~ 354 (454)
T KOG1282|consen 343 NYNDDIKSMLPI 354 (454)
T ss_pred ccccCccchHHH
Confidence 999999999984
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.1e-76 Score=608.99 Aligned_cols=309 Identities=29% Similarity=0.524 Sum_probs=263.8
Q ss_pred cccCccccCCCCCCCCCceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCC
Q 016010 75 MLADKIKWLPGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKD 154 (397)
Q Consensus 75 ~~~~~v~~Lpg~~~~~~~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~ 154 (397)
++.|+|+.|||++.++++++||||++|++..+++||||||||+.+|+++||||||||||||||+ +|+|.|+|||+++.+
T Consensus 20 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~ 98 (437)
T PLN02209 20 RSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNK 98 (437)
T ss_pred CccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccC
Confidence 4568999999998789999999999999877899999999999999999999999999999999 699999999999876
Q ss_pred C-----CccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEeccc
Q 016010 155 G-----KTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESY 229 (397)
Q Consensus 155 ~-----~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESY 229 (397)
+ .++++||+|||+.|||||||||+||||||+++..++. +++++|++++.||+.||++||+|++++|||+||||
T Consensus 99 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 99 VYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred CCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 4 3789999999999999999999999999987765543 56677899999999999999999999999999999
Q ss_pred ccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcccccchhhhhhhccCCChHhHhchhccccccc--CCCChhH
Q 016010 230 AGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR--EGNDTKE 307 (397)
Q Consensus 230 gG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~q~~~~~~f~~~~glIs~~~~~~i~~~C~~~~--~~~~~~~ 307 (397)
||||||.+|++|+++|++..+..||||||+||||++||..|..++++|+|.||+|++++++++++.|.... ....+..
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 99999999999999886545568999999999999999999999999999999999999999999996421 1234678
Q ss_pred HHHHHHHHHhhcCCCccccCCcccCCCCCCCCCCCCCCCCCCCCch---hHHhhhCCcHHHHHHhCCCCC---Cccccch
Q 016010 308 CETFLEKASDEIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTD---YYVEAYLNTREVQTVLHVKPT---NWTACRY 381 (397)
Q Consensus 308 C~~a~~~~~~~~g~in~YnI~~p~C~~~~~~~~~~~~~~~~dpC~~---~~~~~YLN~pdVqkALhv~~~---~W~~Cs~ 381 (397)
|.+++.......+.+|.|+++.+.|..... .....+|.+ ..+..|||+|+||+||||+.. .|..|+.
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~-------~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~ 329 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNT-------QHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHR 329 (437)
T ss_pred HHHHHHHHHHHhhcCCcccccccccccccc-------ccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccc
Confidence 999888776666788999876667854311 112245643 367899999999999999853 7999987
Q ss_pred hhhhccccCCCCcc
Q 016010 382 VYRTQFKYTLKTFV 395 (397)
Q Consensus 382 ~v~~~~~ds~~s~l 395 (397)
.+ .+.++..+++
T Consensus 330 ~~--~~~~d~~~~~ 341 (437)
T PLN02209 330 GI--PYKSDIRSSI 341 (437)
T ss_pred hh--hcccchhhhH
Confidence 65 3444444443
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2.7e-76 Score=605.83 Aligned_cols=305 Identities=30% Similarity=0.567 Sum_probs=263.3
Q ss_pred ccCccccCCCCCCCCCceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCC-
Q 016010 76 LADKIKWLPGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKD- 154 (397)
Q Consensus 76 ~~~~v~~Lpg~~~~~~~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~- 154 (397)
+.+.|++|||+..++++++|||||+|++..+.+||||||||+.+|+++||||||||||||||+ .|+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 347899999997778999999999999877899999999999999999999999999999999 699999999998743
Q ss_pred ----CCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccc
Q 016010 155 ----GKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYA 230 (397)
Q Consensus 155 ----~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYg 230 (397)
+.++++||+||++.|||||||||+||||||+++..++ .+|..+|++++.||+.||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 3578999999999999999999999999998776654 3677788999999999999999999999999999999
Q ss_pred cccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcccccchhhhhhhccCCChHhHhchhccccccc--CCCChhHH
Q 016010 231 GHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR--EGNDTKEC 308 (397)
Q Consensus 231 G~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~q~~~~~~f~~~~glIs~~~~~~i~~~C~~~~--~~~~~~~C 308 (397)
|||||.+|++|+++|++..+.+||||||+||||++||..|..++.+|+|.||+|++++++.+++.|.... .......|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 9999999999999987545578999999999999999999999999999999999999999999997521 12346789
Q ss_pred HHHHHHHHhhcCCCccccCCcccCCCCCCCCCCCCCCCCCCCCch---hHHhhhCCcHHHHHHhCCCCC---Cccccchh
Q 016010 309 ETFLEKASDEIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTD---YYVEAYLNTREVQTVLHVKPT---NWTACRYV 382 (397)
Q Consensus 309 ~~a~~~~~~~~g~in~YnI~~p~C~~~~~~~~~~~~~~~~dpC~~---~~~~~YLN~pdVqkALhv~~~---~W~~Cs~~ 382 (397)
..++.......+++|+|||+.+.|.... . ..++|.. ..++.|||+++||+||||+.. +|..|+..
T Consensus 256 ~~~~~~~~~~~~~~n~yni~~~~~~~~~-------~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~ 326 (433)
T PLN03016 256 LKLTEEYHKCTAKINIHHILTPDCDVTN-------V--TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRT 326 (433)
T ss_pred HHHHHHHHHHhcCCChhhccCCcccccc-------c--CCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcc
Confidence 9998887777889999999987674211 0 1235653 367899999999999999752 79999998
Q ss_pred hhhccccCCCCc
Q 016010 383 YRTQFKYTLKTF 394 (397)
Q Consensus 383 v~~~~~ds~~s~ 394 (397)
|. +.++..++
T Consensus 327 v~--~~~d~~~~ 336 (433)
T PLN03016 327 IP--YNHDIVSS 336 (433)
T ss_pred cc--cccccchh
Confidence 85 44433333
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.3e-76 Score=597.75 Aligned_cols=295 Identities=42% Similarity=0.770 Sum_probs=239.8
Q ss_pred CCCCCCCCceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCC-CccccCC
Q 016010 84 PGQPDGVDFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDG-KTLFRNN 162 (397)
Q Consensus 84 pg~~~~~~~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~-~~l~~N~ 162 (397)
||...++++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|.|+|||++++++ .+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 7888788999999999999888899999999999999999999999999999999 7999999999999554 7899999
Q ss_pred CCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHH
Q 016010 163 YAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTIL 242 (397)
Q Consensus 163 ~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~ 242 (397)
+||+++|||||||||+||||||+.+..++. .+++++|++++.||+.||.+||+|+++||||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYV-WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeecccccccc-chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 999999999999999999999998887655 4899999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCceeeeeeeEeeccccCCcccccchhhhhhhccCCChHhHhchhcccccc-cCCCChhHHHHHHHHHHh----
Q 016010 243 LNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFA-REGNDTKECETFLEKASD---- 317 (397)
Q Consensus 243 ~~n~~~~~~~inLkGI~IGNg~id~~~q~~~~~~f~~~~glIs~~~~~~i~~~C~~~-~~~~~~~~C~~a~~~~~~---- 317 (397)
++|++.....||||||+||||++||..|..++.+|+|.||+|++++++.+.+.|... ........|..+++.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 999865557899999999999999999999999999999999999999999999642 134567889988887765
Q ss_pred --hcCCCccccCCcccCCCCCCCCCCCCCCCCCCCCchhHHhhhCCcHHHHHHhCCC--CC-Cccccchhh
Q 016010 318 --EIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTDYYVEAYLNTREVQTVLHVK--PT-NWTACRYVY 383 (397)
Q Consensus 318 --~~g~in~YnI~~p~C~~~~~~~~~~~~~~~~dpC~~~~~~~YLN~pdVqkALhv~--~~-~W~~Cs~~v 383 (397)
..+++|+|||+.+.|.... . ........+++....+..|||+++||+||||+ .. +|..|++.|
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V 306 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSR-S--SYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAV 306 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SH-C--TTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHH
T ss_pred ccccCCcceeeeecccccccc-c--cccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCccc
Confidence 3479999999987443110 0 00111223455567899999999999999997 22 899999988
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.1e-70 Score=569.20 Aligned_cols=289 Identities=30% Similarity=0.641 Sum_probs=246.2
Q ss_pred cCCCCCCCCCceeEEEEEEecC-CCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCcccc
Q 016010 82 WLPGQPDGVDFDQYAGYVTVDP-KTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFR 160 (397)
Q Consensus 82 ~Lpg~~~~~~~~~ysGyl~v~~-~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~ 160 (397)
++..-..+.++++|||||+|+. ..+++||||||||+.+|+++||||||||||||||+ +|+|.|+|||+|+.++.++.+
T Consensus 35 ~~~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~ 113 (462)
T PTZ00472 35 GSGWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYN 113 (462)
T ss_pred CCCccccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeE
Confidence 3434335667999999999975 45789999999999999999999999999999999 799999999999999888999
Q ss_pred CCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHH
Q 016010 161 NNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (397)
Q Consensus 161 N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 240 (397)
||+||++.+||||||||+||||||+... ++. .+++++|+|++.||+.||++||+|+.+++||+||||||||||.+|.+
T Consensus 114 n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 114 NTYSWNNEAYVIYVDQPAGVGFSYADKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred CCcccccccCeEEEeCCCCcCcccCCCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 9999999999999999999999998654 454 47789999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCceeeeeeeEeeccccCCcccccchhhhhhh-------ccCCChHhHhchhc----------ccccccCCC
Q 016010 241 ILLNNKNTKNTVINLKGIAIGNALIDGPTRSMGVYENLWT-------HALNSDQTHKGIFT----------YCDFAREGN 303 (397)
Q Consensus 241 I~~~n~~~~~~~inLkGI~IGNg~id~~~q~~~~~~f~~~-------~glIs~~~~~~i~~----------~C~~~~~~~ 303 (397)
|+++|++..+.+||||||+||||++||..|..++.+|+|. +|+|++++++.+.+ .|... ...
T Consensus 192 i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~-~~~ 270 (462)
T PTZ00472 192 INMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSN-PDD 270 (462)
T ss_pred HHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhcccc-CCC
Confidence 9999876556789999999999999999999999999996 58999999988764 24331 112
Q ss_pred ChhHHHHHHHHHHh-----hcCCCccccCCcccCCCCCCCCCCCCCCCCCCCCch-hHHhhhCCcHHHHHHhCCCCCCcc
Q 016010 304 DTKECETFLEKASD-----EIGDIDIYNIYAPICINPAFQNGSIGSVHNYDPCTD-YYVEAYLNTREVQTVLHVKPTNWT 377 (397)
Q Consensus 304 ~~~~C~~a~~~~~~-----~~g~in~YnI~~p~C~~~~~~~~~~~~~~~~dpC~~-~~~~~YLN~pdVqkALhv~~~~W~ 377 (397)
....|..+...|.. ..+++|+|||+.+ |.. ++|.+ ..++.|||+|+||+||||+..+|+
T Consensus 271 ~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~--------------~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~ 335 (462)
T PTZ00472 271 ADSSCSVARALCNEYIAVYSATGLNNYDIRKP-CIG--------------PLCYNMDNTIAFMNREDVQSSLGVKPATWQ 335 (462)
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCChhheecc-CCC--------------CCccCHHHHHHHhCCHHHHHHhCCCCCCce
Confidence 33457655544432 1367999999975 732 36764 578999999999999999865899
Q ss_pred ccchhhhhcccc
Q 016010 378 ACRYVYRTQFKY 389 (397)
Q Consensus 378 ~Cs~~v~~~~~d 389 (397)
.|+..|+..+..
T Consensus 336 ~c~~~V~~~~~~ 347 (462)
T PTZ00472 336 SCNMEVNLMFEM 347 (462)
T ss_pred eCCHHHHHHhhh
Confidence 999999887753
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-52 Score=420.31 Aligned_cols=279 Identities=29% Similarity=0.554 Sum_probs=223.3
Q ss_pred CceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccc-cCCCCccccc
Q 016010 91 DFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLF-RNNYAWNNVA 169 (397)
Q Consensus 91 ~~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~-~N~~sW~~~a 169 (397)
++++|+||.+.. -.+|||+||++++|.++|++|||||||||||+ +|+|.|+||+||+.+.+... .||+||++.+
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a 147 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFA 147 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCC
Confidence 356666663322 23999999999999999999999999999999 79999999999999843333 6999999999
Q ss_pred ceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCC--CeEEEecccccccchHHHHHHHHhccC
Q 016010 170 NVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKR--DFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 170 nvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~--~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
||||||||+||||||+... +.. .+...+.+|++.|++.||+.||+|.+. ++||+||||||||+|.||+.|+++|..
T Consensus 148 dLvFiDqPvGTGfS~a~~~-e~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 148 DLVFIDQPVGTGFSRALGD-EKK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred ceEEEecCcccCccccccc-ccc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 9999999999999998322 222 366678899999999999999999887 999999999999999999999998732
Q ss_pred CCCceeeeeeeEeecc-ccCCcccccchhhhhhh----ccCCChHhHhchhccccccc---------CCCChhHHHHHHH
Q 016010 248 TKNTVINLKGIAIGNA-LIDGPTRSMGVYENLWT----HALNSDQTHKGIFTYCDFAR---------EGNDTKECETFLE 313 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg-~id~~~q~~~~~~f~~~----~glIs~~~~~~i~~~C~~~~---------~~~~~~~C~~a~~ 313 (397)
.+..+||++++|||| +|||..++..+..++.. ++..+.+.++++.+.|.... .......|..+..
T Consensus 226 -~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~ 304 (498)
T COG2939 226 -LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASA 304 (498)
T ss_pred -cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHH
Confidence 234799999999999 99999999999999885 45666778888888776421 1233446777766
Q ss_pred HHHhhc------CC---CccccCCcccCCCCCCCCCCCCCCCCCCCCch--hHHhhhCCcHHHHHHhCCCCCCccccchh
Q 016010 314 KASDEI------GD---IDIYNIYAPICINPAFQNGSIGSVHNYDPCTD--YYVEAYLNTREVQTVLHVKPTNWTACRYV 382 (397)
Q Consensus 314 ~~~~~~------g~---in~YnI~~p~C~~~~~~~~~~~~~~~~dpC~~--~~~~~YLN~pdVqkALhv~~~~W~~Cs~~ 382 (397)
.|.... .+ .|.|+|+.. |-.... .--|++ .++..|+|...+|+++......|..|++.
T Consensus 305 ~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~----------~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~ 373 (498)
T COG2939 305 YLTGLMREYVGRAGGRLLNVYDIREE-CRDPGL----------GGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTD 373 (498)
T ss_pred HHHhcchhhhccccccccccccchhh-cCCCCc----------ccccccceeeccccccccchhccccccccchhccchH
Confidence 665322 24 799999874 754211 124555 36788999999999999888789999999
Q ss_pred hhhccc
Q 016010 383 YRTQFK 388 (397)
Q Consensus 383 v~~~~~ 388 (397)
+..+|.
T Consensus 374 a~~~f~ 379 (498)
T COG2939 374 AMTDFL 379 (498)
T ss_pred HHHhhh
Confidence 887774
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=5.8e-48 Score=382.61 Aligned_cols=206 Identities=28% Similarity=0.464 Sum_probs=174.8
Q ss_pred ccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC
Q 016010 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
+|||||||||+||||||+++..++ .+|+.+|+|++.||+.||++||+|++|||||+||||||||||.||++|+++|++
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 589999999999999998766554 366777899999999999999999999999999999999999999999998875
Q ss_pred CCCceeeeeeeEeeccccCCcccccchhhhhhhccCCChHhHhchhccccccc--CCCChhHHHHHHHHHHhhcCCCccc
Q 016010 248 TKNTVINLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFTYCDFAR--EGNDTKECETFLEKASDEIGDIDIY 325 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg~id~~~q~~~~~~f~~~~glIs~~~~~~i~~~C~~~~--~~~~~~~C~~a~~~~~~~~g~in~Y 325 (397)
..+..||||||+||||++||..|..++.+|+|.||+|++++++.+++.|.... .......|.+++.......+++|+|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 55568999999999999999999999999999999999999999999997421 1134568999888777777899999
Q ss_pred cCCcccCCCCCCCCCCCCCCCCCCCCch---hHHhhhCCcHHHHHHhCCCC---CCccccchhhh
Q 016010 326 NIYAPICINPAFQNGSIGSVHNYDPCTD---YYVEAYLNTREVQTVLHVKP---TNWTACRYVYR 384 (397)
Q Consensus 326 nI~~p~C~~~~~~~~~~~~~~~~dpC~~---~~~~~YLN~pdVqkALhv~~---~~W~~Cs~~v~ 384 (397)
||+.+.|.... . ..++|.+ ..+..|||+++||+||||+. .+|..||..|.
T Consensus 159 ~~~~~~~~~~~-------~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~ 214 (319)
T PLN02213 159 HILTPDCDVTN-------V--TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP 214 (319)
T ss_pred hcccCcccCcc-------C--CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc
Confidence 99976664211 0 1135652 36899999999999999974 27999999885
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-43 Score=339.88 Aligned_cols=282 Identities=26% Similarity=0.381 Sum_probs=226.1
Q ss_pred EEEEEEecCCCCceEEEEEEecCCC-CCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEE
Q 016010 95 YAGYVTVDPKTGRSLFYYFAESPQN-SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVF 173 (397)
Q Consensus 95 ysGyl~v~~~~~~~lFy~f~ea~~~-~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLf 173 (397)
-.|||+|+ .+.++|||++.+... ...+||.|||+||||.||.|||+|+|+||...+ +.+|+.+|.+.|+|||
T Consensus 4 ~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 46999997 469999999998754 478999999999999999999999999999765 4579999999999999
Q ss_pred eeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCcee
Q 016010 174 LESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVI 253 (397)
Q Consensus 174 iDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~i 253 (397)
||.|||+||||.+.++.|. .+++++|.|+...|+.||..||||+.+||||+-|||||+..|.+|..+....++ ++.+.
T Consensus 77 vDnPVGaGfSyVdg~~~Y~-~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~-G~i~~ 154 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYT-TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR-GEIKL 154 (414)
T ss_pred ecCCCcCceeeecCccccc-ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc-Cceee
Confidence 9999999999999887776 499999999999999999999999999999999999999999999999887765 45789
Q ss_pred eeeeeEeeccccCCcccccchhhhhhhccCCChHhHhchhc---ccccccC----CCChhHHHHHHHHHHhhcCCCcccc
Q 016010 254 NLKGIAIGNALIDGPTRSMGVYENLWTHALNSDQTHKGIFT---YCDFARE----GNDTKECETFLEKASDEIGDIDIYN 326 (397)
Q Consensus 254 nLkGI~IGNg~id~~~q~~~~~~f~~~~glIs~~~~~~i~~---~C~~~~~----~~~~~~C~~a~~~~~~~~g~in~Yn 326 (397)
|+.||++|+.||+|..-..++.+|+++.++++|..++.+.+ .|....+ ......+....+.+.++..++|.||
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYN 234 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYN 234 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceee
Confidence 99999999999999999999999999999999988877643 3432110 1222233444455667778999999
Q ss_pred CCcccCCCCCCCC-----CCC----CCCCC-CCCCchhHHhhhCCcHHHHHHhCCCCC--Cccccchhhhhc
Q 016010 327 IYAPICINPAFQN-----GSI----GSVHN-YDPCTDYYVEAYLNTREVQTVLHVKPT--NWTACRYVYRTQ 386 (397)
Q Consensus 327 I~~p~C~~~~~~~-----~~~----~~~~~-~dpC~~~~~~~YLN~pdVqkALhv~~~--~W~~Cs~~v~~~ 386 (397)
|..+.-.+..... +++ +.... .-+-..+.++.+||- .||++|++.++ .|..-+..++.+
T Consensus 235 il~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g-~vrkkLgIip~~~~wGgqsg~vFt~ 305 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNG-PVRKKLGIIPGGVKWGGQSGDVFTK 305 (414)
T ss_pred eeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhcc-cccccccccCCCCcccCcCCchHHH
Confidence 9987443322111 111 00001 112123568899985 69999999877 899999988754
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.26 E-value=6.1e-06 Score=76.03 Aligned_cols=116 Identities=21% Similarity=0.234 Sum_probs=75.7
Q ss_pred EEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCC
Q 016010 110 FYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKS 189 (397)
Q Consensus 110 Fy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~ 189 (397)
+|..+.. ...++|+||+++|.+|.+.. |....+. + .+..+++-+| ..|.|.|-.....
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~~-----------l-------~~~~~vi~~D-~~G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLDV-----------L-------TQRFHVVTYD-HRGTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHHH-----------H-------HhccEEEEEc-CCCCCCCCCCCcc
Confidence 4555543 22467999999998777666 5433321 1 1346999999 5689998643322
Q ss_pred CcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 190 DYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 190 ~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
.+ +.++.++++.+++. . .+..+++|+|+|+||..+..+|.+.-+ .++++++.+++..+
T Consensus 60 ~~---~~~~~~~~~~~~i~----~---~~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLD----A---LNIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHH----H---hCCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCCC
Confidence 22 34455666555554 3 244579999999999988888864321 37888888887654
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.25 E-value=5.9e-06 Score=77.12 Aligned_cols=131 Identities=25% Similarity=0.321 Sum_probs=79.8
Q ss_pred eEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEE
Q 016010 94 QYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVF 173 (397)
Q Consensus 94 ~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLf 173 (397)
+..++++++. ..+.|.-+. .+..+|.||+++||||++..-+..+.+. +.. +-.+|+.
T Consensus 2 ~~~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~~------~g~~vi~ 58 (288)
T TIGR01250 2 QIEGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL-----------LKE------EGREVIM 58 (288)
T ss_pred CccceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH-----------HHh------cCCEEEE
Confidence 3456777753 344444332 2234688999999999987533333321 111 1478999
Q ss_pred eeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCcee
Q 016010 174 LESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVI 253 (397)
Q Consensus 174 iDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~i 253 (397)
+|.| |.|.|......+-. .+-+..++++..++. . +..++++|.|+|+||..+..+|..- +.
T Consensus 59 ~d~~-G~G~s~~~~~~~~~-~~~~~~~~~~~~~~~----~---~~~~~~~liG~S~Gg~ia~~~a~~~----------p~ 119 (288)
T TIGR01250 59 YDQL-GCGYSDQPDDSDEL-WTIDYFVDELEEVRE----K---LGLDKFYLLGHSWGGMLAQEYALKY----------GQ 119 (288)
T ss_pred EcCC-CCCCCCCCCccccc-ccHHHHHHHHHHHHH----H---cCCCcEEEEEeehHHHHHHHHHHhC----------cc
Confidence 9955 99988643222100 134455555544443 2 3445799999999999888887641 23
Q ss_pred eeeeeEeeccccC
Q 016010 254 NLKGIAIGNALID 266 (397)
Q Consensus 254 nLkGI~IGNg~id 266 (397)
.++++++.++...
T Consensus 120 ~v~~lvl~~~~~~ 132 (288)
T TIGR01250 120 HLKGLIISSMLDS 132 (288)
T ss_pred ccceeeEeccccc
Confidence 4788888887653
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.08 E-value=8.3e-05 Score=72.35 Aligned_cols=140 Identities=22% Similarity=0.262 Sum_probs=88.6
Q ss_pred ccCccccCCCCCCCCCceeEEEEEEecCCCCc--eEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcC
Q 016010 76 LADKIKWLPGQPDGVDFDQYAGYVTVDPKTGR--SLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNK 153 (397)
Q Consensus 76 ~~~~v~~Lpg~~~~~~~~~ysGyl~v~~~~~~--~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~ 153 (397)
.+.++.+||..|. --.|+.++..+|+ .++|.- . .++ +.|.||+++|.|+.+.. |..+.+
T Consensus 7 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~y~~--~-G~~-~~~~lvliHG~~~~~~~-w~~~~~-------- 67 (302)
T PRK00870 7 PDSRFENLPDYPF------APHYVDVDDGDGGPLRMHYVD--E-GPA-DGPPVLLLHGEPSWSYL-YRKMIP-------- 67 (302)
T ss_pred CcccccCCcCCCC------CceeEeecCCCCceEEEEEEe--c-CCC-CCCEEEEECCCCCchhh-HHHHHH--------
Confidence 3457888998874 2357889875555 466552 2 223 46889999999877776 654442
Q ss_pred CCCccccCCCCcccccceEEeeCCCCcccccccCC-CCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccc
Q 016010 154 DGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGH 232 (397)
Q Consensus 154 ~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~ 232 (397)
.|.. +-.+|+.+| ..|.|.|-.... .++ +.+..++++.++|. . ....+++|.|+|+||.
T Consensus 68 ---~L~~------~gy~vi~~D-l~G~G~S~~~~~~~~~---~~~~~a~~l~~~l~----~---l~~~~v~lvGhS~Gg~ 127 (302)
T PRK00870 68 ---ILAA------AGHRVIAPD-LIGFGRSDKPTRREDY---TYARHVEWMRSWFE----Q---LDLTDVTLVCQDWGGL 127 (302)
T ss_pred ---HHHh------CCCEEEEEC-CCCCCCCCCCCCcccC---CHHHHHHHHHHHHH----H---cCCCCEEEEEEChHHH
Confidence 1111 247899999 568998832111 122 33445555555444 3 2445799999999999
Q ss_pred cchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 233 YVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 233 yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
.+-.+|.+- +=.++++++.++.
T Consensus 128 ia~~~a~~~----------p~~v~~lvl~~~~ 149 (302)
T PRK00870 128 IGLRLAAEH----------PDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHhC----------hhheeEEEEeCCC
Confidence 888777642 1238888887764
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.97 E-value=7.9e-05 Score=70.13 Aligned_cols=109 Identities=18% Similarity=0.124 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHh
Q 016010 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (397)
Q Consensus 120 ~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (397)
+.+.|.||+++|.+|.+.. |..+.+. |. +..+++.+| ..|.|.|.......+ +-+..
T Consensus 25 ~~~~~~vv~~hG~~~~~~~-~~~~~~~-----------l~-------~~~~vi~~D-~~G~G~S~~~~~~~~---~~~~~ 81 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHS-WRDLMPP-----------LA-------RSFRVVAPD-LPGHGFTRAPFRFRF---TLPSM 81 (278)
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHHH-----------Hh-------hCcEEEeec-CCCCCCCCCccccCC---CHHHH
Confidence 3456899999999777665 5433321 11 236899999 568998854322122 44556
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 200 A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
++++..+++ . +..++++|+|+|+||..+..+|.+- +-.++++++.++..++.
T Consensus 82 ~~~l~~~i~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 82 AEDLSALCA----A---EGLSPDGVIGHSAGAAIALRLALDG----------PVTPRMVVGINAALMPF 133 (278)
T ss_pred HHHHHHHHH----H---cCCCCceEEEECccHHHHHHHHHhC----------CcccceEEEEcCccccc
Confidence 666666554 2 2345789999999998777776532 23478899988876653
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=97.96 E-value=6.3e-05 Score=71.80 Aligned_cols=125 Identities=14% Similarity=0.158 Sum_probs=82.3
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCccc-ccceEEeeCCCCcccc
Q 016010 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGFS 183 (397)
Q Consensus 105 ~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvLfiDqP~GvGfS 183 (397)
+|..|+|.+++.. +..+|+||.++|..+++.. |-.+.+. +.+ -..++.+| ..|.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~~------------------l~~~g~~via~D-~~G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAEN------------------ISSLGILVFSHD-HIGHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHHH------------------HHhCCCEEEEcc-CCCCCCC
Confidence 5678999888774 3456999999998776665 5444321 222 36799999 7899998
Q ss_pred cccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecc
Q 016010 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (397)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg 263 (397)
-.... .. .+-....+|+..++...-++ +...+++|+|+|.||..+..+|.+ . +-+++|+++.+|
T Consensus 67 ~~~~~-~~--~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~----~------p~~i~~lil~~p 130 (276)
T PHA02857 67 NGEKM-MI--DDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYK----N------PNLFTAMILMSP 130 (276)
T ss_pred CCccC-Cc--CCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHh----C------ccccceEEEecc
Confidence 54211 11 12233456666666544333 345689999999999866655532 1 224899999999
Q ss_pred ccCC
Q 016010 264 LIDG 267 (397)
Q Consensus 264 ~id~ 267 (397)
.+++
T Consensus 131 ~~~~ 134 (276)
T PHA02857 131 LVNA 134 (276)
T ss_pred cccc
Confidence 8764
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.82 E-value=0.00017 Score=69.68 Aligned_cols=123 Identities=15% Similarity=0.149 Sum_probs=80.0
Q ss_pred EEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCC
Q 016010 98 YVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESP 177 (397)
Q Consensus 98 yl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP 177 (397)
|++++ +..++|.-. .+ ..|.||+|+|.++.+.+ |..+.+. | .+...++.+| .
T Consensus 12 ~~~~~---~~~i~y~~~----G~-~~~~vlllHG~~~~~~~-w~~~~~~-----------L-------~~~~~vi~~D-l 63 (294)
T PLN02824 12 TWRWK---GYNIRYQRA----GT-SGPALVLVHGFGGNADH-WRKNTPV-----------L-------AKSHRVYAID-L 63 (294)
T ss_pred eEEEc---CeEEEEEEc----CC-CCCeEEEECCCCCChhH-HHHHHHH-----------H-------HhCCeEEEEc-C
Confidence 66664 455665432 11 23789999999998887 7655531 2 2345899999 6
Q ss_pred CCcccccccCCCCcc---cCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceee
Q 016010 178 AGVGFSYSSTKSDYE---LNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (397)
Q Consensus 178 ~GvGfSy~~~~~~~~---~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~in 254 (397)
.|.|.|-........ ..+.++.|+++..+|.+. ..++++|+|+|.||..+-.+|.+- +-.
T Consensus 64 pG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~----------p~~ 126 (294)
T PLN02824 64 LGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDA----------PEL 126 (294)
T ss_pred CCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhC----------hhh
Confidence 899999643221110 014455566666666532 346899999999999887777542 123
Q ss_pred eeeeEeecccc
Q 016010 255 LKGIAIGNALI 265 (397)
Q Consensus 255 LkGI~IGNg~i 265 (397)
++++++.|+..
T Consensus 127 v~~lili~~~~ 137 (294)
T PLN02824 127 VRGVMLINISL 137 (294)
T ss_pred eeEEEEECCCc
Confidence 89999988764
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.76 E-value=0.00018 Score=67.27 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=72.7
Q ss_pred CCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChH
Q 016010 118 QNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDK 197 (397)
Q Consensus 118 ~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~ 197 (397)
..+.++|.||+++|.+|.+.. |..+.+. + .+..+++.+|.| |.|.|... ..+ +-.
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~~-----------l-------~~~~~vi~~D~~-G~G~s~~~--~~~---~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLARD-----------L-------VNDHDIIQVDMR-NHGLSPRD--PVM---NYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHHH-----------H-------hhCCeEEEECCC-CCCCCCCC--CCC---CHH
Confidence 456678999999999888876 6555431 1 234699999965 88888532 222 445
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecc
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg 263 (397)
+.++|+..+|.. +..++++|.|+|.||..+..+|.+-- -.++++++.++
T Consensus 66 ~~~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~~----------~~v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALAP----------DRIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhCH----------hhcceEEEEec
Confidence 567787777764 23457999999999998888886421 23788888764
No 16
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.76 E-value=0.00022 Score=69.92 Aligned_cols=126 Identities=21% Similarity=0.344 Sum_probs=74.3
Q ss_pred EEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEee
Q 016010 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLE 175 (397)
Q Consensus 96 sGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiD 175 (397)
.+|+.+.+ +..++|.-.. .++ .|.||+++||||.++. ... .. + + + .+..+|+.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~g---~~~-~~~lvllHG~~~~~~~-~~~-~~---~--------~--~----~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQSG---NPD-GKPVVFLHGGPGSGTD-PGC-RR---F--------F--D----PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEECc---CCC-CCEEEEECCCCCCCCC-HHH-Hh---c--------c--C----ccCCEEEEEC
Confidence 46888864 5778876421 222 3557899999987654 111 10 0 0 0 1347899999
Q ss_pred CCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeee
Q 016010 176 SPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (397)
Q Consensus 176 qP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inL 255 (397)
. .|.|.|..... ... .+..+.++++. .+.+.. +..+++++|+|+||..+-.+|.+-- -.+
T Consensus 61 ~-~G~G~S~~~~~-~~~-~~~~~~~~dl~----~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p----------~~v 120 (306)
T TIGR01249 61 Q-RGCGKSTPHAC-LEE-NTTWDLVADIE----KLREKL---GIKNWLVFGGSWGSTLALAYAQTHP----------EVV 120 (306)
T ss_pred C-CCCCCCCCCCC-ccc-CCHHHHHHHHH----HHHHHc---CCCCEEEEEECHHHHHHHHHHHHCh----------Hhh
Confidence 5 58998863221 111 13334444444 334332 3457999999999987777765421 236
Q ss_pred eeeEeeccccC
Q 016010 256 KGIAIGNALID 266 (397)
Q Consensus 256 kGI~IGNg~id 266 (397)
+++++.+..+.
T Consensus 121 ~~lvl~~~~~~ 131 (306)
T TIGR01249 121 TGLVLRGIFLL 131 (306)
T ss_pred hhheeeccccC
Confidence 77777776654
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.66 E-value=0.00044 Score=69.12 Aligned_cols=128 Identities=13% Similarity=0.184 Sum_probs=80.1
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCccc-ccceEEeeCCCCcccc
Q 016010 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGFS 183 (397)
Q Consensus 105 ~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvLfiDqP~GvGfS 183 (397)
+|..+||...... +...+|+||+++|..+.++.-+-.+.+ .+.+ -.+|+-+|.| |.|.|
T Consensus 70 ~g~~l~~~~~~p~-~~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPE-NSRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCEEEEEEEecC-CCCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecCC-CCCCC
Confidence 5778888776543 224679999999976554431111111 1112 3689999964 88988
Q ss_pred cccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecc
Q 016010 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (397)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg 263 (397)
-... .+. .+-+..++|+..++.. +..-+++...+++|+|+|+||..+-.+|.+ + +-.++|+++.+|
T Consensus 130 ~~~~--~~~-~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~---~-------p~~v~glVLi~p 195 (349)
T PLN02385 130 EGLH--GYI-PSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q-------PNAWDGAILVAP 195 (349)
T ss_pred CCCC--CCc-CCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHh---C-------cchhhheeEecc
Confidence 5321 221 1334567777776654 333445666789999999999877665542 1 123789999888
Q ss_pred ccC
Q 016010 264 LID 266 (397)
Q Consensus 264 ~id 266 (397)
...
T Consensus 196 ~~~ 198 (349)
T PLN02385 196 MCK 198 (349)
T ss_pred ccc
Confidence 654
No 18
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.61 E-value=0.00019 Score=77.82 Aligned_cols=139 Identities=19% Similarity=0.303 Sum_probs=91.4
Q ss_pred EEEecCCCCceEEEEEEecCC-CCCC-CCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCC-cccccceEEe
Q 016010 98 YVTVDPKTGRSLFYYFAESPQ-NSST-NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYA-WNNVANVVFL 174 (397)
Q Consensus 98 yl~v~~~~~~~lFy~f~ea~~-~~~~-~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~s-W~~~anvLfi 174 (397)
++.+...+|..+..|++.... ++.. -|+|++++||| +++ +|. ... .+... +.+-..|+++
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~~~-------~~~q~~~~~G~~V~~~ 429 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------SFN-------PEIQVLASAGYAVLAP 429 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------ccc-------hhhHHHhcCCeEEEEe
Confidence 455555567889999997754 3333 49999999999 444 330 111 11111 3456889999
Q ss_pred eCCCCc-ccc--cccCCC-CcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCC
Q 016010 175 ESPAGV-GFS--YSSTKS-DYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN 250 (397)
Q Consensus 175 DqP~Gv-GfS--y~~~~~-~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~ 250 (397)
+ |.|. ||+ |..... ++ +. ...+|+..++. |++..|......+.|+|.||||- ++..++.+.
T Consensus 430 n-~RGS~GyG~~F~~~~~~~~---g~-~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGy----mtl~~~~~~----- 494 (620)
T COG1506 430 N-YRGSTGYGREFADAIRGDW---GG-VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGY----MTLLAATKT----- 494 (620)
T ss_pred C-CCCCCccHHHHHHhhhhcc---CC-ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHH----HHHHHHhcC-----
Confidence 9 7764 433 222111 22 22 34668888888 99999999888899999999994 445555543
Q ss_pred ceeeeeeeEeeccccCCccc
Q 016010 251 TVINLKGIAIGNALIDGPTR 270 (397)
Q Consensus 251 ~~inLkGI~IGNg~id~~~q 270 (397)
. .+|..+...|.++....
T Consensus 495 -~-~f~a~~~~~~~~~~~~~ 512 (620)
T COG1506 495 -P-RFKAAVAVAGGVDWLLY 512 (620)
T ss_pred -c-hhheEEeccCcchhhhh
Confidence 2 48888888888877543
No 19
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.61 E-value=0.00014 Score=74.05 Aligned_cols=131 Identities=18% Similarity=0.291 Sum_probs=79.5
Q ss_pred EEEEEEecC--CCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccccc
Q 016010 109 LFYYFAESP--QNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSS 186 (397)
Q Consensus 109 lFy~f~ea~--~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~ 186 (397)
-.||+++++ .+|++||+||+++|| |.+.+.=|+.+..= .+=+..-+...||.+|-..-. | ..
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~L-----~~i~~~l~~~SILvLDYsLt~--~-~~ 169 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEFL-----LNIYKLLPEVSILVLDYSLTS--S-DE 169 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHHH-----HHHHHHcCCCeEEEEeccccc--c-cc
Confidence 469999964 368889999999998 44555555543210 011111123389999944322 0 00
Q ss_pred CCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 187 TKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 187 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
....|++ .-..+-..|+-|. +. -...++.|.|+|=||+-+-.+..++.+.++. ..+ |+.++.+||++
T Consensus 170 ~~~~yPt--QL~qlv~~Y~~Lv---~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~P-k~~iLISPWv~ 236 (374)
T PF10340_consen 170 HGHKYPT--QLRQLVATYDYLV---ES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL----PYP-KSAILISPWVN 236 (374)
T ss_pred CCCcCch--HHHHHHHHHHHHH---hc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC----CCC-ceeEEECCCcC
Confidence 1222332 2222333343333 12 2446799999999999999999987665532 222 78999999999
Q ss_pred Cc
Q 016010 267 GP 268 (397)
Q Consensus 267 ~~ 268 (397)
+.
T Consensus 237 l~ 238 (374)
T PF10340_consen 237 LV 238 (374)
T ss_pred Cc
Confidence 87
No 20
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.61 E-value=0.00025 Score=63.08 Aligned_cols=104 Identities=21% Similarity=0.254 Sum_probs=69.2
Q ss_pred EEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHH
Q 016010 126 LLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYT 205 (397)
Q Consensus 126 vlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~ 205 (397)
||+++|++|.+.. |..+.+. |. +-.+|+.+|. .|.|.|-.... +...+-++.++++..
T Consensus 1 vv~~hG~~~~~~~-~~~~~~~-----------l~-------~~~~v~~~d~-~G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAEA-----------LA-------RGYRVIAFDL-PGHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHHH-----------HH-------TTSEEEEEEC-TTSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHHH-----------Hh-------CCCEEEEEec-CCccccccccc--cCCcchhhhhhhhhh
Confidence 7899999988866 5555431 21 3567999995 58998865432 111233445555555
Q ss_pred HHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 206 FLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 206 fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+| +.. ..++++|+|+|+||..+-.+|.+. +-.++|+++.++.....
T Consensus 59 ~l----~~~---~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LL----DAL---GIKKVILVGHSMGGMIALRLAARY----------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HH----HHT---TTSSEEEEEETHHHHHHHHHHHHS----------GGGEEEEEEESESSSHH
T ss_pred cc----ccc---cccccccccccccccccccccccc----------ccccccceeeccccccc
Confidence 44 443 226899999999999888887542 12599999999988643
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.54 E-value=0.00071 Score=65.38 Aligned_cols=115 Identities=18% Similarity=0.227 Sum_probs=76.3
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccc
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~ 185 (397)
|..++|.-.- +.|.||+++|.|+.+.. |..+.+. | .+...|+-+| ..|.|+|-.
T Consensus 16 g~~i~y~~~G------~g~~vvllHG~~~~~~~-w~~~~~~-----------L-------~~~~~via~D-~~G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIETG------EGDPIVFLHGNPTSSYL-WRNIIPH-----------L-------AGLGRCLAPD-LIGMGASDK 69 (295)
T ss_pred CEEEEEEEeC------CCCEEEEECCCCCCHHH-HHHHHHH-----------H-------hhCCEEEEEc-CCCCCCCCC
Confidence 4566665321 34789999999988877 6544421 1 2234899999 569999853
Q ss_pred cCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
. ..++ +-...|+|+..++.. +...+++|.|+|.||..+-.+|.+-- -.++++++.|+..
T Consensus 70 ~-~~~~---~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lil~~~~~ 128 (295)
T PRK03592 70 P-DIDY---TFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHP----------DRVRGIAFMEAIV 128 (295)
T ss_pred C-CCCC---CHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhCh----------hheeEEEEECCCC
Confidence 2 2222 445566676665553 24468999999999988877776422 2389999999865
Q ss_pred CC
Q 016010 266 DG 267 (397)
Q Consensus 266 d~ 267 (397)
.+
T Consensus 129 ~~ 130 (295)
T PRK03592 129 RP 130 (295)
T ss_pred CC
Confidence 44
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.51 E-value=0.001 Score=65.66 Aligned_cols=137 Identities=17% Similarity=0.172 Sum_probs=82.9
Q ss_pred EEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCccc-ccceEEe
Q 016010 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFL 174 (397)
Q Consensus 96 sGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvLfi 174 (397)
.++++.. +|..|+|+.+........+|+||+++|..+.++..+-.+.+ .+.+ -.+|+.+
T Consensus 34 ~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~------------------~L~~~Gy~V~~~ 93 (330)
T PLN02298 34 KSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAI------------------FLAQMGFACFAL 93 (330)
T ss_pred cceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHH------------------HHHhCCCEEEEe
Confidence 4555553 46788887554322224578999999984333221111110 1223 4789999
Q ss_pred eCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceee
Q 016010 175 ESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (397)
Q Consensus 175 DqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~in 254 (397)
| -.|.|.|-.. ..+. .+-+..++|+..++...- ...++...+++|+|+|.||..+-.++.. + +-.
T Consensus 94 D-~rGhG~S~~~--~~~~-~~~~~~~~D~~~~i~~l~-~~~~~~~~~i~l~GhSmGG~ia~~~a~~----~------p~~ 158 (330)
T PLN02298 94 D-LEGHGRSEGL--RAYV-PNVDLVVEDCLSFFNSVK-QREEFQGLPRFLYGESMGGAICLLIHLA----N------PEG 158 (330)
T ss_pred c-CCCCCCCCCc--cccC-CCHHHHHHHHHHHHHHHH-hcccCCCCCEEEEEecchhHHHHHHHhc----C------ccc
Confidence 9 5688988432 1121 144566788777776433 3233445579999999999876655431 1 124
Q ss_pred eeeeEeeccccCC
Q 016010 255 LKGIAIGNALIDG 267 (397)
Q Consensus 255 LkGI~IGNg~id~ 267 (397)
++|+++.++..+.
T Consensus 159 v~~lvl~~~~~~~ 171 (330)
T PLN02298 159 FDGAVLVAPMCKI 171 (330)
T ss_pred ceeEEEecccccC
Confidence 8999999987654
No 23
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.50 E-value=0.0012 Score=64.16 Aligned_cols=121 Identities=18% Similarity=0.284 Sum_probs=71.3
Q ss_pred EEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEee
Q 016010 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLE 175 (397)
Q Consensus 96 sGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiD 175 (397)
+.+++++ +..++|.- . . ..|.||+|+|.|..+.. |-.+.+ . +.+..+++-+|
T Consensus 16 ~~~~~~~---~~~i~y~~--~--G--~~~~iv~lHG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D 67 (286)
T PRK03204 16 SRWFDSS---RGRIHYID--E--G--TGPPILLCHGNPTWSFL-YRDIIV-----------A-------LRDRFRCVAPD 67 (286)
T ss_pred ceEEEcC---CcEEEEEE--C--C--CCCEEEEECCCCccHHH-HHHHHH-----------H-------HhCCcEEEEEC
Confidence 4577775 34565542 1 1 35789999999854444 533331 1 12347999999
Q ss_pred CCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeee
Q 016010 176 SPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (397)
Q Consensus 176 qP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inL 255 (397)
. .|.|.|-.....++ +-+..++++..++ +. +...+++|+|+|+||..+-.+|. .. +-.+
T Consensus 68 ~-~G~G~S~~~~~~~~---~~~~~~~~~~~~~----~~---~~~~~~~lvG~S~Gg~va~~~a~----~~------p~~v 126 (286)
T PRK03204 68 Y-LGFGLSERPSGFGY---QIDEHARVIGEFV----DH---LGLDRYLSMGQDWGGPISMAVAV----ER------ADRV 126 (286)
T ss_pred C-CCCCCCCCCCcccc---CHHHHHHHHHHHH----HH---hCCCCEEEEEECccHHHHHHHHH----hC------hhhe
Confidence 5 58888842211111 2334444444444 33 24457999999999975544443 21 2358
Q ss_pred eeeEeecccc
Q 016010 256 KGIAIGNALI 265 (397)
Q Consensus 256 kGI~IGNg~i 265 (397)
++++++++..
T Consensus 127 ~~lvl~~~~~ 136 (286)
T PRK03204 127 RGVVLGNTWF 136 (286)
T ss_pred eEEEEECccc
Confidence 8998888764
No 24
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.50 E-value=0.00084 Score=69.39 Aligned_cols=131 Identities=18% Similarity=0.189 Sum_probs=79.3
Q ss_pred EEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhH--hhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEee
Q 016010 98 YVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSS--LGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLE 175 (397)
Q Consensus 98 yl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS--~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiD 175 (397)
.|++.-..+..|.-|++... ..+..|+||. .||.+... . +..+.+ .+. ..=.+||-+|
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vli-~gG~~~~~~~~-~~~~~~-----------~La------~~Gy~vl~~D 229 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPK-GDGPFPTVLV-CGGLDSLQTDY-YRLFRD-----------YLA------PRGIAMLTID 229 (414)
T ss_pred EEEEEcCCCcEEEEEEEECC-CCCCccEEEE-eCCcccchhhh-HHHHHH-----------HHH------hCCCEEEEEC
Confidence 44444333445666665443 3356788875 56666532 2 222221 010 1226899999
Q ss_pred CCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeee
Q 016010 176 SPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (397)
Q Consensus 176 qP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inL 255 (397)
.| |.|.|-.... . .+ .......+.+|+...|.....++.|+|+|+||.+++.+|..- +-.+
T Consensus 230 ~p-G~G~s~~~~~---~--~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~----------p~ri 290 (414)
T PRK05077 230 MP-SVGFSSKWKL---T--QD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE----------PPRL 290 (414)
T ss_pred CC-CCCCCCCCCc---c--cc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC----------CcCc
Confidence 88 9998843211 0 11 122234566777777777777899999999999999888531 1248
Q ss_pred eeeEeeccccCC
Q 016010 256 KGIAIGNALIDG 267 (397)
Q Consensus 256 kGI~IGNg~id~ 267 (397)
+++++.+|.++.
T Consensus 291 ~a~V~~~~~~~~ 302 (414)
T PRK05077 291 KAVACLGPVVHT 302 (414)
T ss_pred eEEEEECCccch
Confidence 898888887753
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.40 E-value=0.00081 Score=60.71 Aligned_cols=106 Identities=23% Similarity=0.303 Sum_probs=66.2
Q ss_pred CCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHH
Q 016010 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (397)
Q Consensus 123 ~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (397)
+|+||+++|.+|.+.. |-.+.+ .|. +-.+|+-+| ..|.|.|-.. .+....+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L~-------~~~~v~~~d-~~g~G~s~~~--~~~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LLG-------PHFRCLAID-LPGHGSSQSP--DEIERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hhc-------ccCeEEEEc-CCCCCCCCCC--CccChhhHHHHHHH
Confidence 4889999998887766 543332 111 236899999 5588888432 11111133344444
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 203 ~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
++..+.+++ ..++++|.|+|+||..+..+|.+. .-.++++++.++...
T Consensus 59 ---~~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~----------~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 59 ---ILATLLDQL---GIEPFFLVGYSMGGRIALYYALQY----------PERVQGLILESGSPG 106 (251)
T ss_pred ---HHHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhC----------chheeeeEEecCCCC
Confidence 233333433 456899999999999888887753 124788888877543
No 26
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.39 E-value=0.0013 Score=63.04 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=74.8
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccc
Q 016010 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (397)
Q Consensus 105 ~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy 184 (397)
++..+.|+..+. + ..+|.||+++|-++.+.. |..+.+. | .+..+|+.+| ..|.|.|-
T Consensus 10 ~~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~~-----------L-------~~~~~vi~~D-l~G~G~S~ 66 (276)
T TIGR02240 10 DGQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIEA-----------L-------DPDLEVIAFD-VPGVGGSS 66 (276)
T ss_pred CCcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHHH-----------h-------ccCceEEEEC-CCCCCCCC
Confidence 345677876542 2 344678999986555555 5443321 1 1356999999 67899984
Q ss_pred ccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 185 SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 185 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
.. ..++ +-+..++++..|+.. +.-++++|+|+|+||..+-.+|.+-- -.++++++.|+.
T Consensus 67 ~~-~~~~---~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p----------~~v~~lvl~~~~ 125 (276)
T TIGR02240 67 TP-RHPY---RFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYP----------ERCKKLILAATA 125 (276)
T ss_pred CC-CCcC---cHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCH----------HHhhheEEeccC
Confidence 32 2222 334455565555553 23457999999999997777775321 248999999887
Q ss_pred cC
Q 016010 265 ID 266 (397)
Q Consensus 265 id 266 (397)
..
T Consensus 126 ~~ 127 (276)
T TIGR02240 126 AG 127 (276)
T ss_pred Cc
Confidence 54
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.38 E-value=0.00086 Score=62.27 Aligned_cols=101 Identities=19% Similarity=0.189 Sum_probs=67.2
Q ss_pred CCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHH
Q 016010 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (397)
Q Consensus 123 ~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (397)
+|.||+++|.+|.+.. |-.+.+. + +..+++.+| ..|.|.|..... .+-+..+++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~~-----------l--------~~~~vi~~D-~~G~G~S~~~~~-----~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGEA-----------L--------PDYPRLYID-LPGHGGSAAISV-----DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHHH-----------c--------CCCCEEEec-CCCCCCCCCccc-----cCHHHHHHH
Confidence 5889999999998876 6544421 1 137899999 789999853211 133445556
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 203 ~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
+.++|. . +...+++++|+|+||..+-.+|.+. .. -.++++++.++..
T Consensus 56 l~~~l~----~---~~~~~~~lvG~S~Gg~va~~~a~~~---~~------~~v~~lvl~~~~~ 102 (242)
T PRK11126 56 LSQTLQ----S---YNILPYWLVGYSLGGRIAMYYACQG---LA------GGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHH----H---cCCCCeEEEEECHHHHHHHHHHHhC---Cc------ccccEEEEeCCCC
Confidence 555554 3 3456899999999998877777642 11 1277888876553
No 28
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.27 E-value=0.0031 Score=64.83 Aligned_cols=120 Identities=14% Similarity=0.164 Sum_probs=72.9
Q ss_pred ceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccccc
Q 016010 107 RSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSS 186 (397)
Q Consensus 107 ~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~ 186 (397)
+.+.+..++. ..++|.||+|+|.++.+.. |....+ .+ .+..+|+-+| -.|.|.|-..
T Consensus 92 ~~~~~~~~~~---~~~~p~vvllHG~~~~~~~-~~~~~~-----------~L-------~~~~~vi~~D-~rG~G~S~~~ 148 (402)
T PLN02894 92 RFINTVTFDS---KEDAPTLVMVHGYGASQGF-FFRNFD-----------AL-------ASRFRVIAID-QLGWGGSSRP 148 (402)
T ss_pred CeEEEEEecC---CCCCCEEEEECCCCcchhH-HHHHHH-----------HH-------HhCCEEEEEC-CCCCCCCCCC
Confidence 3455554443 2467999999998776555 432111 11 2346899999 4688887321
Q ss_pred CCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 187 TKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 187 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
. +.....+.+.+.+.+.+.+|.+.. ...+++|.|+|+||..+-.+|.+- +-.++++++.++..
T Consensus 149 -~--~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 149 -D--FTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPAG 211 (402)
T ss_pred -C--cccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCcc
Confidence 1 111122334444566667777643 345799999999998766666431 23478888887754
No 29
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.24 E-value=0.0019 Score=61.38 Aligned_cols=106 Identities=13% Similarity=0.159 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCChhHhhHHhhhh-cCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhH
Q 016010 122 TNPLLLWLNGGPGCSSLGYGAMSE-LGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (397)
Q Consensus 122 ~~PlvlWLnGGPGcSS~~~g~~~E-~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (397)
+.|.||+|+|.++-+.. +..+.. +-+ + ..+-.+|+-+| ..|.|.|-... .+.. .....+
T Consensus 29 ~~~~ivllHG~~~~~~~-~~~~~~~~~~---------l------~~~~~~vi~~D-~~G~G~S~~~~-~~~~--~~~~~~ 88 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGG-WSNYYRNIGP---------F------VDAGYRVILKD-SPGFNKSDAVV-MDEQ--RGLVNA 88 (282)
T ss_pred CCCeEEEECCCCCchhh-HHHHHHHHHH---------H------HhCCCEEEEEC-CCCCCCCCCCc-Cccc--ccchhH
Confidence 44779999997654433 322111 000 0 11248999999 67899884321 1111 111235
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
+++..++. . +..+++++.|+|+||..+-.+|.+--+ .++++++.++.
T Consensus 89 ~~l~~~l~----~---l~~~~~~lvG~S~Gg~ia~~~a~~~p~----------~v~~lvl~~~~ 135 (282)
T TIGR03343 89 RAVKGLMD----A---LDIEKAHLVGNSMGGATALNFALEYPD----------RIGKLILMGPG 135 (282)
T ss_pred HHHHHHHH----H---cCCCCeeEEEECchHHHHHHHHHhChH----------hhceEEEECCC
Confidence 55444443 3 245689999999999999888864321 26677776653
No 30
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.19 E-value=0.0043 Score=63.81 Aligned_cols=130 Identities=18% Similarity=0.155 Sum_probs=83.2
Q ss_pred CCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccc
Q 016010 104 KTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFS 183 (397)
Q Consensus 104 ~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfS 183 (397)
..+..+|++.++... ...+|+||+++|.++.+.. |-.+.+. +. .+-.+++-+| -.|.|.|
T Consensus 118 ~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~~-----------L~------~~Gy~V~~~D-~rGhG~S 177 (395)
T PLN02652 118 ARRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAKQ-----------LT------SCGFGVYAMD-WIGHGGS 177 (395)
T ss_pred CCCCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHHH-----------HH------HCCCEEEEeC-CCCCCCC
Confidence 345688888887642 3457899999998776654 4333321 11 1235899999 5688888
Q ss_pred cccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecc
Q 016010 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (397)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg 263 (397)
-... .+. .+.+..++|+..+++..-..+| ..+++|+|+|.||..+..++. +.+ ..-.++|+++.+|
T Consensus 178 ~~~~--~~~-~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~sP 243 (395)
T PLN02652 178 DGLH--GYV-PSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTSP 243 (395)
T ss_pred CCCC--CCC-cCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEECc
Confidence 5421 121 1344556777777776555554 347999999999987655442 211 1235899999999
Q ss_pred ccCC
Q 016010 264 LIDG 267 (397)
Q Consensus 264 ~id~ 267 (397)
+++.
T Consensus 244 ~l~~ 247 (395)
T PLN02652 244 ALRV 247 (395)
T ss_pred cccc
Confidence 8754
No 31
>PLN02578 hydrolase
Probab=97.10 E-value=0.0032 Score=63.24 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=69.5
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccc
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~ 185 (397)
+..++|.-.. +.|.||.++|-++.+.. |....+. | .+..+|+.+|.| |.|.|-.
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~-w~~~~~~-----------l-------~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFH-WRYNIPE-----------L-------AKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHHHH-----------H-------hcCCEEEEECCC-CCCCCCC
Confidence 4567765322 23557899986665444 4332211 1 134789999965 8887743
Q ss_pred cCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
. ..+| +....++++..|+... ...+++|+|+|+||..+..+|.+-- -.++++++.|+.
T Consensus 129 ~-~~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p----------~~v~~lvLv~~~ 186 (354)
T PLN02578 129 A-LIEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYP----------ELVAGVALLNSA 186 (354)
T ss_pred c-cccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhCh----------HhcceEEEECCC
Confidence 2 2222 3445566766666543 2468999999999997777776432 247888888764
No 32
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.08 E-value=0.0046 Score=62.33 Aligned_cols=105 Identities=16% Similarity=0.111 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHH
Q 016010 122 TNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQ 201 (397)
Q Consensus 122 ~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~ 201 (397)
..|.||.|+|.++.+.. |..+.+. | .+...|+.+| -.|.|.|-.....++ +-+..++
T Consensus 87 ~gp~lvllHG~~~~~~~-w~~~~~~-----------L-------~~~~~via~D-l~G~G~S~~~~~~~~---~~~~~a~ 143 (360)
T PLN02679 87 SGPPVLLVHGFGASIPH-WRRNIGV-----------L-------AKNYTVYAID-LLGFGASDKPPGFSY---TMETWAE 143 (360)
T ss_pred CCCeEEEECCCCCCHHH-HHHHHHH-----------H-------hcCCEEEEEC-CCCCCCCCCCCCccc---cHHHHHH
Confidence 45788999999887776 6544421 1 1346899999 568898843211122 3345666
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 202 d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
++..+|.. +...+++|.|+|+||..+-.+|.. +. +-.++|+++.|+..
T Consensus 144 ~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~---~~------P~rV~~LVLi~~~~ 191 (360)
T PLN02679 144 LILDFLEE-------VVQKPTVLIGNSVGSLACVIAASE---ST------RDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHh---cC------hhhcCEEEEECCcc
Confidence 66666653 234589999999999655444421 11 12388888888653
No 33
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.06 E-value=0.0098 Score=57.63 Aligned_cols=53 Identities=21% Similarity=0.242 Sum_probs=35.1
Q ss_pred HHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 205 TFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 205 ~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+.|..+++. ++ ....+++|+|+|.||+.+-.+|.+ .. -.+++++..+|..++.
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~----~p------~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGGHGALVIALK----NP------DRFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHh----Cc------ccceEEEEECCccCcc
Confidence 334444444 33 445679999999999866666543 11 1268999999998764
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.05 E-value=0.0048 Score=61.24 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhH
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (397)
.+.|.||+++|.+|.+.. |..+.+. |. +..+++-+| ..|.|.|-.... . .+....+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~~-----------l~-------~~~~v~~~d-~~g~G~s~~~~~-~---~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHAA-----------LA-------AGRPVIALD-LPGHGASSKAVG-A---GSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHHH-----------Hh-------cCCEEEEEc-CCCCCCCCCCCC-C---CCHHHHH
Confidence 456899999998888776 5544431 11 236899999 568888732211 1 1334445
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
+++..++ +. +..++++|.|+|+||..+..+|..- .-.++++++.++.
T Consensus 185 ~~~~~~~----~~---~~~~~~~lvG~S~Gg~~a~~~a~~~----------~~~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFL----DA---LGIERAHLVGHSMGGAVALRLAARA----------PQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHH----Hh---cCCccEEEEeechHHHHHHHHHHhC----------chheeEEEEECcC
Confidence 5554444 33 3445799999999999888887641 1236777776654
No 35
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.05 E-value=0.0036 Score=60.67 Aligned_cols=107 Identities=17% Similarity=0.178 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhH
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (397)
.++|.||+++|..+.++. |..+.+. |.. .-.+++-+|.| |.|.|....... .+-+..+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~~-----------L~~------~g~~vi~~dl~-g~G~s~~~~~~~---~~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRCL-----------MEN------SGYKVTCIDLK-SAGIDQSDADSV---TTFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHHH-----------HHh------CCCEEEEeccc-CCCCCCCCcccC---CCHHHHH
Confidence 667999999998776665 5443321 111 13589999976 788764322111 1334444
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
++ +.++++... ..++++|+|+||||..+-.++...- -.++++++.++..
T Consensus 74 ~~----l~~~i~~l~--~~~~v~lvGhS~GG~v~~~~a~~~p----------~~v~~lv~~~~~~ 122 (273)
T PLN02211 74 KP----LIDFLSSLP--ENEKVILVGHSAGGLSVTQAIHRFP----------KKICLAVYVAATM 122 (273)
T ss_pred HH----HHHHHHhcC--CCCCEEEEEECchHHHHHHHHHhCh----------hheeEEEEecccc
Confidence 44 444444432 2468999999999997777765321 1367777776643
No 36
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.03 E-value=0.0046 Score=56.02 Aligned_cols=89 Identities=19% Similarity=0.209 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhH
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (397)
..+|++|.++|-++.+.. |..+.+. + .+..+++.+|. .|.|.|-.. ..++ +.+..+
T Consensus 11 ~~~~~li~~hg~~~~~~~-~~~~~~~-----------l-------~~~~~v~~~d~-~G~G~s~~~-~~~~---~~~~~~ 66 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRM-WDPVLPA-----------L-------TPDFRVLRYDK-RGHGLSDAP-EGPY---SIEDLA 66 (251)
T ss_pred CCCCeEEEEcCcccchhh-HHHHHHH-----------h-------hcccEEEEecC-CCCCCCCCC-CCCC---CHHHHH
Confidence 367999999986444444 4444331 1 12468999995 688887432 1122 445566
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHH
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 240 (397)
+++..+++.+ ...+++|.|+|+||..+-.+|.+
T Consensus 67 ~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 67 DDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 6666655532 34579999999999988777764
No 37
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=96.98 E-value=0.0076 Score=61.80 Aligned_cols=133 Identities=17% Similarity=0.112 Sum_probs=79.5
Q ss_pred CceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccc
Q 016010 91 DFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVAN 170 (397)
Q Consensus 91 ~~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~an 170 (397)
+++.-+|+... .++-.+||. +. .+..+|.||.|+|.|+.+.. |-.+.+. | .+..+
T Consensus 101 ~~~~~~~~~~~--~~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~-w~~~~~~-----------L-------~~~~~ 155 (383)
T PLN03084 101 GLKMGAQSQAS--SDLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYS-YRKVLPV-----------L-------SKNYH 155 (383)
T ss_pred cccccceeEEc--CCceEEEEE--ec--CCCCCCeEEEECCCCCCHHH-HHHHHHH-----------H-------hcCCE
Confidence 44544555553 235556655 22 33456899999999887766 5544421 2 13468
Q ss_pred eEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCC
Q 016010 171 VVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN 250 (397)
Q Consensus 171 vLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~ 250 (397)
|+-+| -.|.|+|.......-...+-+..++++..|+.. +...+++|+|+|+||..+-.+|. ..
T Consensus 156 Via~D-lpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~----~~----- 218 (383)
T PLN03084 156 AIAFD-WLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYAS----AH----- 218 (383)
T ss_pred EEEEC-CCCCCCCCCCcccccccCCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHH----hC-----
Confidence 99999 568999854322100001334555666655553 23457999999999965444443 21
Q ss_pred ceeeeeeeEeeccccC
Q 016010 251 TVINLKGIAIGNALID 266 (397)
Q Consensus 251 ~~inLkGI~IGNg~id 266 (397)
+-.++++++.|+...
T Consensus 219 -P~~v~~lILi~~~~~ 233 (383)
T PLN03084 219 -PDKIKKLILLNPPLT 233 (383)
T ss_pred -hHhhcEEEEECCCCc
Confidence 224899999998653
No 38
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.94 E-value=0.004 Score=58.72 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=62.2
Q ss_pred CeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHH
Q 016010 124 PLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDS 203 (397)
Q Consensus 124 PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~ 203 (397)
|.||.|+|.++++.. |-.+.+ .+.+..+++.+|. .|.|.|-.. ..+ +.++.++++
T Consensus 14 ~~ivllHG~~~~~~~-w~~~~~------------------~L~~~~~vi~~Dl-~G~G~S~~~--~~~---~~~~~~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLNAEV-WRCIDE------------------ELSSHFTLHLVDL-PGFGRSRGF--GAL---SLADMAEAV 68 (256)
T ss_pred CeEEEECCCCCChhH-HHHHHH------------------HHhcCCEEEEecC-CCCCCCCCC--CCC---CHHHHHHHH
Confidence 569999998777776 654442 1225589999995 599988532 111 333344443
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 204 ~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
. + +...+++++|+|+||..+..+|..- +-.++++++.|+.
T Consensus 69 ~----~-------~~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lili~~~ 108 (256)
T PRK10349 69 L----Q-------QAPDKAIWLGWSLGGLVASQIALTH----------PERVQALVTVASS 108 (256)
T ss_pred H----h-------cCCCCeEEEEECHHHHHHHHHHHhC----------hHhhheEEEecCc
Confidence 2 1 1335799999999999888777531 2347888887763
No 39
>PRK10749 lysophospholipase L2; Provisional
Probab=96.90 E-value=0.0069 Score=60.17 Aligned_cols=127 Identities=13% Similarity=0.108 Sum_probs=77.3
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccc
Q 016010 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (397)
Q Consensus 105 ~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy 184 (397)
+|..++|+.+... ..+|+||.++|-.+.+.. |..+.. . +. .+-.+|+-+| -.|.|.|-
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~~---~--------l~------~~g~~v~~~D-~~G~G~S~ 96 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELAY---D--------LF------HLGYDVLIID-HRGQGRSG 96 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHHH---H--------HH------HCCCeEEEEc-CCCCCCCC
Confidence 3567888877642 456899999997554433 333221 1 00 0236899999 56899885
Q ss_pred ccCCCCc-c-cCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeec
Q 016010 185 SSTKSDY-E-LNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGN 262 (397)
Q Consensus 185 ~~~~~~~-~-~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGN 262 (397)
....... . ..+-+..++|+..+++..... +...++++.|+|.||..+-.+|.. + +-.++|+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~GhSmGG~ia~~~a~~---~-------p~~v~~lvl~~ 163 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQP---GPYRKRYALAHSMGGAILTLFLQR---H-------PGVFDAIALCA 163 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhc---CCCCCeEEEEEcHHHHHHHHHHHh---C-------CCCcceEEEEC
Confidence 3211100 0 013345666777666654433 345689999999999766555542 2 12378999999
Q ss_pred cccC
Q 016010 263 ALID 266 (397)
Q Consensus 263 g~id 266 (397)
|...
T Consensus 164 p~~~ 167 (330)
T PRK10749 164 PMFG 167 (330)
T ss_pred chhc
Confidence 8764
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.88 E-value=0.004 Score=56.31 Aligned_cols=97 Identities=14% Similarity=0.071 Sum_probs=58.9
Q ss_pred CCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHH
Q 016010 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (397)
Q Consensus 123 ~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (397)
+|.||+++|.++.+.. |-.+.+ .+ .+..+|+.+| ..|.|.|... .++ +-+..+++
T Consensus 4 ~~~iv~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~d-~~G~G~s~~~--~~~---~~~~~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-FRCLDE-----------EL-------SAHFTLHLVD-LPGHGRSRGF--GPL---SLADAAEA 58 (245)
T ss_pred CceEEEEcCCCCchhh-HHHHHH-----------hh-------ccCeEEEEec-CCcCccCCCC--CCc---CHHHHHHH
Confidence 4889999997665555 433332 11 1247899999 5688887432 111 22333333
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 203 ~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
+.. .. ..++++.|+|+||..+..+|.+-- -.++++++.++..
T Consensus 59 ~~~-------~~----~~~~~lvG~S~Gg~~a~~~a~~~p----------~~v~~~il~~~~~ 100 (245)
T TIGR01738 59 IAA-------QA----PDPAIWLGWSLGGLVALHIAATHP----------DRVRALVTVASSP 100 (245)
T ss_pred HHH-------hC----CCCeEEEEEcHHHHHHHHHHHHCH----------HhhheeeEecCCc
Confidence 322 11 257999999999998877775321 1367777776643
No 41
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.77 E-value=0.013 Score=61.84 Aligned_cols=134 Identities=18% Similarity=0.191 Sum_probs=80.7
Q ss_pred CceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHh-h-hhcCCeEEcCCCCccccCCCCcccc
Q 016010 91 DFDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGA-M-SELGPFRVNKDGKTLFRNNYAWNNV 168 (397)
Q Consensus 91 ~~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~-~-~E~GP~~v~~~~~~l~~N~~sW~~~ 168 (397)
..+.-.-|++.++ ..|||+..... ++..+|.||+|+|.+|.+.. |.. + .++ .. .+.+.
T Consensus 173 ~~~~~~~~~~~~~---~~l~~~~~gp~-~~~~k~~VVLlHG~~~s~~~-W~~~~~~~L------------~~---~~~~~ 232 (481)
T PLN03087 173 DCKFCTSWLSSSN---ESLFVHVQQPK-DNKAKEDVLFIHGFISSSAF-WTETLFPNF------------SD---AAKST 232 (481)
T ss_pred ccceeeeeEeeCC---eEEEEEEecCC-CCCCCCeEEEECCCCccHHH-HHHHHHHHH------------HH---HhhCC
Confidence 3344457777753 67888866543 22345789999999988876 542 1 111 00 12345
Q ss_pred cceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCC
Q 016010 169 ANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNT 248 (397)
Q Consensus 169 anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 248 (397)
..++.+|. .|.|.|-......+ +.+..++++. ..+++. +...+++|.|+|.||..+-.+|.+-.+
T Consensus 233 yrVia~Dl-~G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe----- 297 (481)
T PLN03087 233 YRLFAVDL-LGFGRSPKPADSLY---TLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG----- 297 (481)
T ss_pred CEEEEECC-CCCCCCcCCCCCcC---CHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH-----
Confidence 68999995 57887742211112 3333444432 234443 345689999999999988777764211
Q ss_pred CCceeeeeeeEeeccc
Q 016010 249 KNTVINLKGIAIGNAL 264 (397)
Q Consensus 249 ~~~~inLkGI~IGNg~ 264 (397)
.++++++.++.
T Consensus 298 -----~V~~LVLi~~~ 308 (481)
T PLN03087 298 -----AVKSLTLLAPP 308 (481)
T ss_pred -----hccEEEEECCC
Confidence 37888888753
No 42
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.72 E-value=0.0075 Score=60.14 Aligned_cols=76 Identities=13% Similarity=0.004 Sum_probs=49.7
Q ss_pred cccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCC-CCeEEEecccccccchHHHHHHHHhc
Q 016010 167 NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLNN 245 (397)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~I~~~n 245 (397)
+...|+.+|.| |-|-|. ...+ +....|+|+..+|.. +.- +.+.|+|+|+||..+-.+|.+--+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~---~~~~---~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P~-- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL---DVPI---DTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHPA-- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCC---CCCC---CHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHChH--
Confidence 45789999977 655442 1222 334557777666653 232 346799999999888887764322
Q ss_pred cCCCCceeeeeeeEeeccccC
Q 016010 246 KNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 246 ~~~~~~~inLkGI~IGNg~id 266 (397)
.++++++.++...
T Consensus 162 --------~V~~LvLi~s~~~ 174 (343)
T PRK08775 162 --------RVRTLVVVSGAHR 174 (343)
T ss_pred --------hhheEEEECcccc
Confidence 3788888887543
No 43
>PLN02442 S-formylglutathione hydrolase
Probab=96.72 E-value=0.02 Score=55.92 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+++...+..+++ .....+++|+|+|+||+-+-.+|.+ +. -.+++++..+|..|+.
T Consensus 127 ~~l~~~i~~~~~---~~~~~~~~i~G~S~GG~~a~~~a~~----~p------~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 127 KELPKLLSDNFD---QLDTSRASIFGHSMGGHGALTIYLK----NP------DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHH---hcCCCceEEEEEChhHHHHHHHHHh----Cc------hhEEEEEEECCccCcc
Confidence 334444444443 3455679999999999765555542 21 1378899999998864
No 44
>PRK06489 hypothetical protein; Provisional
Probab=96.68 E-value=0.012 Score=59.27 Aligned_cols=131 Identities=12% Similarity=0.099 Sum_probs=67.4
Q ss_pred CceEEEEEEecC---CCCCCCCeEEEEcCCCChhHhhHH--hhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCc
Q 016010 106 GRSLFYYFAESP---QNSSTNPLLLWLNGGPGCSSLGYG--AMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGV 180 (397)
Q Consensus 106 ~~~lFy~f~ea~---~~~~~~PlvlWLnGGPGcSS~~~g--~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~Gv 180 (397)
|..++|.-+... .++.+.|.||.|+|++|.+.. |- .+.+ ..+.. ...--.+..+|+.+|.| |.
T Consensus 49 g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~---~l~~~-------~~~l~~~~~~Via~Dl~-Gh 116 (360)
T PRK06489 49 ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAG---ELFGP-------GQPLDASKYFIILPDGI-GH 116 (360)
T ss_pred CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHH---HhcCC-------CCcccccCCEEEEeCCC-CC
Confidence 456666643211 012336889999999886654 31 1110 00000 00001245789999965 89
Q ss_pred ccccccCCC---CcccCChHHhHHHHHHHHHHHHHHCCCCCCCCe-EEEecccccccchHHHHHHHHhccCCCCceeeee
Q 016010 181 GFSYSSTKS---DYELNGDKLTAQDSYTFLVNWLERFPQYKKRDF-YIAGESYAGHYVPQLAYTILLNNKNTKNTVINLK 256 (397)
Q Consensus 181 GfSy~~~~~---~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~-yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLk 256 (397)
|.|-..... .....+-+..++++..++. +. +.-.++ +|+|+|.||..+-.+|.+-- =.++
T Consensus 117 G~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~---~~---lgi~~~~~lvG~SmGG~vAl~~A~~~P----------~~V~ 180 (360)
T PRK06489 117 GKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT---EG---LGVKHLRLILGTSMGGMHAWMWGEKYP----------DFMD 180 (360)
T ss_pred CCCCCCCcCCCCCCCcccHHHHHHHHHHHHH---Hh---cCCCceeEEEEECHHHHHHHHHHHhCc----------hhhh
Confidence 988432110 0000122334444444332 22 232356 48999999987777775421 1277
Q ss_pred eeEeeccc
Q 016010 257 GIAIGNAL 264 (397)
Q Consensus 257 GI~IGNg~ 264 (397)
++++.++.
T Consensus 181 ~LVLi~s~ 188 (360)
T PRK06489 181 ALMPMASQ 188 (360)
T ss_pred eeeeeccC
Confidence 77776654
No 45
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.62 E-value=0.017 Score=51.19 Aligned_cols=104 Identities=23% Similarity=0.271 Sum_probs=62.6
Q ss_pred CCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHH
Q 016010 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (397)
Q Consensus 123 ~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (397)
.|.+++++|+|+++.. +....+. +..... + .+++.+|+| |.|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6799999999999887 4441111 000110 1 799999999 999996 11 11 11112444
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 203 ~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
+..|++.+ ...++++.|+|+||..+-.++.+..+ .++++++.++...
T Consensus 78 ----~~~~~~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 78 ----LAALLDAL---GLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred ----HHHHHHHh---CCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 44444432 33349999999997666655554322 4677777766554
No 46
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.58 E-value=0.012 Score=54.55 Aligned_cols=54 Identities=17% Similarity=0.149 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
.++..++....+++ .....+++|+|+|.||..+-.+|.. +. -.+.++++..|..
T Consensus 77 ~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~---~p-------~~~~~~~~~~g~~ 130 (212)
T TIGR01840 77 ESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCT---YP-------DVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHh---Cc-------hhheEEEeecCCc
Confidence 34444444433443 2344579999999999866555542 21 1367776666654
No 47
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.49 E-value=0.024 Score=57.18 Aligned_cols=132 Identities=13% Similarity=0.162 Sum_probs=80.2
Q ss_pred EEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEee
Q 016010 96 AGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLE 175 (397)
Q Consensus 96 sGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiD 175 (397)
+=|+.+.+..+ -|.++-....++++-++.++|= |.+++ +|.- |=.+..+.-||-.||
T Consensus 67 ~~~v~i~~~~~----iw~~~~~~~~~~~~plVliHGy-GAg~g---~f~~---------------Nf~~La~~~~vyaiD 123 (365)
T KOG4409|consen 67 KKYVRIPNGIE----IWTITVSNESANKTPLVLIHGY-GAGLG---LFFR---------------NFDDLAKIRNVYAID 123 (365)
T ss_pred eeeeecCCCce----eEEEeecccccCCCcEEEEecc-chhHH---HHHH---------------hhhhhhhcCceEEec
Confidence 44666663322 3455444444677777889982 33322 2221 112233478999999
Q ss_pred CCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeee
Q 016010 176 SPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (397)
Q Consensus 176 qP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inL 255 (397)
..|-|.|-...- +. +.+.+-+.+.+-+++|.... +=.+.+|.|||+||-.....|.+--+ .+
T Consensus 124 -llG~G~SSRP~F-~~---d~~~~e~~fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAlKyPe----------rV 185 (365)
T KOG4409|consen 124 -LLGFGRSSRPKF-SI---DPTTAEKEFVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYALKYPE----------RV 185 (365)
T ss_pred -ccCCCCCCCCCC-CC---CcccchHHHHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHHhChH----------hh
Confidence 678999954322 11 22334457888899999864 44589999999999655444433222 26
Q ss_pred eeeEeeccccCCc
Q 016010 256 KGIAIGNALIDGP 268 (397)
Q Consensus 256 kGI~IGNg~id~~ 268 (397)
+-+++.+||--+.
T Consensus 186 ~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 186 EKLILVSPWGFPE 198 (365)
T ss_pred ceEEEeccccccc
Confidence 7788888886554
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=96.46 E-value=0.016 Score=60.89 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=63.9
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccc
Q 016010 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (397)
Q Consensus 105 ~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy 184 (397)
+|..+.|+-+. +.+.|.||.++|.++.+.. |..+.+. | .+...|+.+| ..|.|.|.
T Consensus 11 ~g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~~-----------L-------~~~~~Vi~~D-~~G~G~S~ 66 (582)
T PRK05855 11 DGVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAPL-----------L-------ADRFRVVAYD-VRGAGRSS 66 (582)
T ss_pred CCEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHHH-----------h-------hcceEEEEec-CCCCCCCC
Confidence 35677777442 2347999999999877665 6544431 1 1236899999 45899996
Q ss_pred ccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccc
Q 016010 185 SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYV 234 (397)
Q Consensus 185 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yv 234 (397)
...... . .+....++|+..++...- ..++++|+|+|+||..+
T Consensus 67 ~~~~~~-~-~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a 108 (582)
T PRK05855 67 APKRTA-A-YTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQG 108 (582)
T ss_pred CCCccc-c-cCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHH
Confidence 432211 1 245667778877776421 23469999999999544
No 49
>PLN02965 Probable pheophorbidase
Probab=96.44 E-value=0.013 Score=55.51 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=62.4
Q ss_pred EEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHH
Q 016010 126 LLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYT 205 (397)
Q Consensus 126 vlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~ 205 (397)
||+++|.++.+.. |-...+ .|. .+...|+-+| -.|.|.|-......+ +.+..|+|+..
T Consensus 6 vvllHG~~~~~~~-w~~~~~-----------~L~------~~~~~via~D-l~G~G~S~~~~~~~~---~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWC-WYKLAT-----------LLD------AAGFKSTCVD-LTGAGISLTDSNTVS---SSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCc-HHHHHH-----------HHh------hCCceEEEec-CCcCCCCCCCccccC---CHHHHHHHHHH
Confidence 8889998765544 433321 111 1235799999 679998843222111 34455666655
Q ss_pred HHHHHHHHCCCCCC-CCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 206 FLVNWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 206 fL~~f~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
+|. . +.. +++++.|+|+||..+..+|.+. . -.++++++.|+.
T Consensus 64 ~l~----~---l~~~~~~~lvGhSmGG~ia~~~a~~~---p-------~~v~~lvl~~~~ 106 (255)
T PLN02965 64 LLS----D---LPPDHKVILVGHSIGGGSVTEALCKF---T-------DKISMAIYVAAA 106 (255)
T ss_pred HHH----h---cCCCCCEEEEecCcchHHHHHHHHhC---c-------hheeEEEEEccc
Confidence 554 3 222 5899999999998888777632 1 136788888775
No 50
>PRK10566 esterase; Provisional
Probab=96.40 E-value=0.022 Score=53.44 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=56.7
Q ss_pred CCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCccc-ccceEEeeCCCCcccccccCCCC-cc--cCC
Q 016010 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGFSYSSTKSD-YE--LNG 195 (397)
Q Consensus 120 ~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvLfiDqP~GvGfSy~~~~~~-~~--~~~ 195 (397)
....|+||+++|++|.... +..+.. .+.+ -.+++.+|. .|.|-|+...... .. ...
T Consensus 24 ~~~~p~vv~~HG~~~~~~~-~~~~~~------------------~l~~~G~~v~~~d~-~g~G~~~~~~~~~~~~~~~~~ 83 (249)
T PRK10566 24 DTPLPTVFFYHGFTSSKLV-YSYFAV------------------ALAQAGFRVIMPDA-PMHGARFSGDEARRLNHFWQI 83 (249)
T ss_pred CCCCCEEEEeCCCCcccch-HHHHHH------------------HHHhCCCEEEEecC-CcccccCCCccccchhhHHHH
Confidence 3457999999999887654 332221 1112 257888894 4666554321110 00 000
Q ss_pred hHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHH
Q 016010 196 DKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAY 239 (397)
Q Consensus 196 d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 239 (397)
-....+++.. +..|+...+.....+++|+|+|+||..+-.++.
T Consensus 84 ~~~~~~~~~~-~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 84 LLQNMQEFPT-LRAAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHHHHHHH-HHHHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 0123344433 345555554455678999999999998877664
No 51
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.28 E-value=0.049 Score=53.19 Aligned_cols=126 Identities=11% Similarity=0.066 Sum_probs=76.2
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCC---hhHhhHHhhhhcCCeEEcCCCCccccCCCCcc-cccceEEeeCCCCcc
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPG---CSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANVVFLESPAGVG 181 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPG---cSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anvLfiDqP~GvG 181 (397)
...+|.|+++.... ..+|+||+++|-.+ ++.-.+..+.+ .+. .-.+++-+| -.|.|
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~------------------~La~~Gy~Vl~~D-l~G~G 68 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQAR------------------AFAAGGFGVLQID-LYGCG 68 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHH------------------HHHHCCCEEEEEC-CCCCC
Confidence 45688888876532 33799999998532 11110111111 111 246899999 46799
Q ss_pred cccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEee
Q 016010 182 FSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIG 261 (397)
Q Consensus 182 fSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IG 261 (397)
.|-.... +. +.....+|+..+ .+|++.. ...+++|+|+|.||..+..+|.+. +-.++++++-
T Consensus 69 ~S~g~~~-~~---~~~~~~~Dv~~a-i~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~----------p~~v~~lVL~ 130 (266)
T TIGR03101 69 DSAGDFA-AA---RWDVWKEDVAAA-YRWLIEQ---GHPPVTLWGLRLGALLALDAANPL----------AAKCNRLVLW 130 (266)
T ss_pred CCCCccc-cC---CHHHHHHHHHHH-HHHHHhc---CCCCEEEEEECHHHHHHHHHHHhC----------ccccceEEEe
Confidence 8854322 11 233344555443 3455543 245899999999999887776431 1247889999
Q ss_pred ccccCCcc
Q 016010 262 NALIDGPT 269 (397)
Q Consensus 262 Ng~id~~~ 269 (397)
+|.++...
T Consensus 131 ~P~~~g~~ 138 (266)
T TIGR03101 131 QPVVSGKQ 138 (266)
T ss_pred ccccchHH
Confidence 98877553
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.97 E-value=0.046 Score=52.92 Aligned_cols=79 Identities=18% Similarity=0.142 Sum_probs=52.7
Q ss_pred cceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCC
Q 016010 169 ANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNT 248 (397)
Q Consensus 169 anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 248 (397)
.+++-+|.| |.|.|-... . +-+...+|+..+++.+-+.+|.+ .+++++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-~-----~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~--- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-L-----GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD--- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-C-----CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC---
Confidence 689999965 899875321 1 22345567677666554555554 35999999999965444432 11
Q ss_pred CCceeeeeeeEeeccccCC
Q 016010 249 KNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 249 ~~~~inLkGI~IGNg~id~ 267 (397)
-.++|+++.||++..
T Consensus 122 ----~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 ----LRVAGLVLLNPWVRT 136 (274)
T ss_pred ----CCccEEEEECCccCC
Confidence 249999999999764
No 53
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.94 E-value=0.067 Score=52.88 Aligned_cols=146 Identities=18% Similarity=0.233 Sum_probs=80.9
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccc-----eEEeeC----
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVAN-----VVFLES---- 176 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~an-----vLfiDq---- 176 (397)
+.+.-||++.-..-++.+||||.|+|+=|...- +- +-..|+++|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~-------------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QL-------------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hh-------------------cccchhhhhcccCcEEECcCccccc
Confidence 566779999877778888999999998665443 11 2224555443 344331
Q ss_pred --CCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceee
Q 016010 177 --PAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (397)
Q Consensus 177 --P~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~in 254 (397)
|-+.|-++... +.. .+...+..+.+....-..+| ......+||+|-|-||..+-.|+.. .++ -
T Consensus 104 wn~~~~~~~~~p~--~~~--~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~---~p~-------~ 168 (312)
T COG3509 104 WNANGCGNWFGPA--DRR--RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACE---YPD-------I 168 (312)
T ss_pred cCCCcccccCCcc--ccc--CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhc---Ccc-------c
Confidence 23344443221 111 11122223333333333333 3355579999999999766655543 222 2
Q ss_pred eeeeEeecccc-CCc-ccccchhhhhhhccCCCh
Q 016010 255 LKGIAIGNALI-DGP-TRSMGVYENLWTHALNSD 286 (397)
Q Consensus 255 LkGI~IGNg~i-d~~-~q~~~~~~f~~~~glIs~ 286 (397)
+.+|++..|.. +.. .....-.+.+..||..|.
T Consensus 169 faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 169 FAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred ccceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 77788877777 443 233334556666666654
No 54
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.93 E-value=0.0081 Score=58.68 Aligned_cols=112 Identities=13% Similarity=0.184 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcCCCChh-HhhH-HhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChH
Q 016010 120 SSTNPLLLWLNGGPGCS-SLGY-GAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDK 197 (397)
Q Consensus 120 ~~~~PlvlWLnGGPGcS-S~~~-g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~ 197 (397)
..++|++|+++|-.|.. .. + -.+. +.+.-..-.||+.+|-+.+..-.|.. . ..+..
T Consensus 33 ~~~~p~vilIHG~~~~~~~~-~~~~l~----------------~~ll~~~~~nVi~vD~~~~~~~~y~~--a---~~~~~ 90 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEES-WISDLR----------------KAYLSRGDYNVIVVDWGRGANPNYPQ--A---VNNTR 90 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCc-HHHHHH----------------HHHHhcCCCEEEEEECccccccChHH--H---HHhHH
Confidence 34679999999976654 22 1 0111 00000134899999976542111210 0 01334
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
..++++..+|....+.. .....+++|+|+|.|||.+-.+|.+.-. +++.|+..+|.
T Consensus 91 ~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa 146 (275)
T cd00707 91 VVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCC
Confidence 45667667666655442 2345679999999999998888875421 37777776654
No 55
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.90 E-value=0.023 Score=55.77 Aligned_cols=112 Identities=21% Similarity=0.359 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhh-hcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHh
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMS-ELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~-E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (397)
..-|+++.++|| |.|.|.|+.|. |+ .+.. ..-++-+| -.|.|-+-..+..|. +-+..
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~el---------~s~~--------~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~ 129 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFASEL---------KSKI--------RCRCLALD-LRGHGETKVENEDDL---SLETM 129 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHHHH---------Hhhc--------ceeEEEee-ccccCccccCChhhc---CHHHH
Confidence 456999999998 99988877776 32 0111 12247899 789999988777775 55778
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 200 A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
++|+...+++||..- .-+++|+|||-||-...+.|.. + ..-+|-||.+.+=+-..
T Consensus 130 ~KD~~~~i~~~fge~----~~~iilVGHSmGGaIav~~a~~----k-----~lpsl~Gl~viDVVEgt 184 (343)
T KOG2564|consen 130 SKDFGAVIKELFGEL----PPQIILVGHSMGGAIAVHTAAS----K-----TLPSLAGLVVIDVVEGT 184 (343)
T ss_pred HHHHHHHHHHHhccC----CCceEEEeccccchhhhhhhhh----h-----hchhhhceEEEEEechH
Confidence 999999999888432 2359999999999877555542 1 23458888887654433
No 56
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.86 E-value=0.091 Score=53.09 Aligned_cols=146 Identities=17% Similarity=0.221 Sum_probs=88.9
Q ss_pred EEEEEEecCCCCceEEEEEEecCCC-C-CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcc-cccce
Q 016010 95 YAGYVTVDPKTGRSLFYYFAESPQN-S-STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANV 171 (397)
Q Consensus 95 ysGyl~v~~~~~~~lFy~f~ea~~~-~-~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anv 171 (397)
++.=++++ ....++-+.|..... + ..+|++||++||=-|-+.. + ...+.+--.+. ..+|.
T Consensus 62 ~~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--------------~-~~~y~~~~~~~a~~~~~ 124 (336)
T KOG1515|consen 62 TSKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--------------N-SPAYDSFCTRLAAELNC 124 (336)
T ss_pred eeeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--------------C-CchhHHHHHHHHHHcCe
Confidence 34444444 457799999987653 3 5899999999996664421 0 00001111122 45565
Q ss_pred EEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHH-HHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCC
Q 016010 172 VFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVN-WLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN 250 (397)
Q Consensus 172 LfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~-f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~ 250 (397)
+-|= |+|--. ....++. .-++.=+.+.-|+.+ |+...=+.+. ++|+|.|-||..+-.+|.++.+.. .
T Consensus 125 vvvS----VdYRLA-PEh~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~r--v~l~GDSaGGNia~~va~r~~~~~----~ 192 (336)
T KOG1515|consen 125 VVVS----VDYRLA-PEHPFPA-AYDDGWAALKWVLKNSWLKLGADPSR--VFLAGDSAGGNIAHVVAQRAADEK----L 192 (336)
T ss_pred EEEe----cCcccC-CCCCCCc-cchHHHHHHHHHHHhHHHHhCCCccc--EEEEccCccHHHHHHHHHHHhhcc----C
Confidence 5543 555433 2223332 222222233334444 8877555543 999999999999999999998753 1
Q ss_pred ceeeeeeeEeeccccCCcc
Q 016010 251 TVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 251 ~~inLkGI~IGNg~id~~~ 269 (397)
..+.|||+++.-|++....
T Consensus 193 ~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 193 SKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred CCcceEEEEEEecccCCCC
Confidence 3588999999999887654
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=95.79 E-value=0.058 Score=64.95 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=67.9
Q ss_pred CCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCC-----CCccc
Q 016010 119 NSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTK-----SDYEL 193 (397)
Q Consensus 119 ~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~-----~~~~~ 193 (397)
+..+.|.||+|+|.+|.+.. |..+.+ .+ .+..+++.+|. .|.|.|..... ....
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl-~G~G~S~~~~~~~~~~~~~~- 1425 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDL-PGHGGSKIQNHAKETQTEPT- 1425 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcC-CCCCCCCCcccccccccccc-
Confidence 34467899999999999876 544432 11 12368999995 58888753221 0011
Q ss_pred CChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 194 NGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 194 ~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
.+-+..|+++..++. . +...+++|+|+|+||..+-.+|.+-- -.++++++.+|.
T Consensus 1426 ~si~~~a~~l~~ll~----~---l~~~~v~LvGhSmGG~iAl~~A~~~P----------~~V~~lVlis~~ 1479 (1655)
T PLN02980 1426 LSVELVADLLYKLIE----H---ITPGKVTLVGYSMGARIALYMALRFS----------DKIEGAVIISGS 1479 (1655)
T ss_pred CCHHHHHHHHHHHHH----H---hCCCCEEEEEECHHHHHHHHHHHhCh----------HhhCEEEEECCC
Confidence 133445555555544 2 24468999999999988777775421 237777777654
No 58
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=95.73 E-value=0.082 Score=53.73 Aligned_cols=133 Identities=15% Similarity=0.082 Sum_probs=72.4
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHh----------hhhc-CCeEEcCCCCccccCCCCcccccceEEe
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGA----------MSEL-GPFRVNKDGKTLFRNNYAWNNVANVVFL 174 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~----------~~E~-GP~~v~~~~~~l~~N~~sW~~~anvLfi 174 (397)
+..++|.-+-. .++..+|.||.++|-+|.+.. +.. +..+ ||. ..+ -.+...||-+
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~~~~~~~------~~l------~~~~~~vi~~ 97 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWDNMVGPG------KPI------DTDRYFVICS 97 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhh-cccccccCCCCcchhhccCCC------Ccc------CccceEEEec
Confidence 45688875432 123457999999999887765 221 1111 100 000 0235689999
Q ss_pred eCCCCcccccccCCC------CcccCChHHhHHHHHHHHHHHHHHCCCCCCCC-eEEEecccccccchHHHHHHHHhccC
Q 016010 175 ESPAGVGFSYSSTKS------DYELNGDKLTAQDSYTFLVNWLERFPQYKKRD-FYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 175 DqP~GvGfSy~~~~~------~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~-~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
|.|-|.|.|.+..+. .+...-...+-+++...+.++++.. .-.+ ++|+|+|+||..+-.+|..--
T Consensus 98 Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p----- 169 (379)
T PRK00175 98 NVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYP----- 169 (379)
T ss_pred cCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhCh-----
Confidence 976545555432110 0000000112334444445555443 3345 589999999988877777532
Q ss_pred CCCceeeeeeeEeecccc
Q 016010 248 TKNTVINLKGIAIGNALI 265 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg~i 265 (397)
-.++++++.|+..
T Consensus 170 -----~~v~~lvl~~~~~ 182 (379)
T PRK00175 170 -----DRVRSALVIASSA 182 (379)
T ss_pred -----HhhhEEEEECCCc
Confidence 2388888888654
No 59
>PRK07581 hypothetical protein; Validated
Probab=95.55 E-value=0.077 Score=52.54 Aligned_cols=130 Identities=12% Similarity=0.005 Sum_probs=68.1
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccc
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~ 185 (397)
+..++|.-+.. ..+...|+||.++|++|.+.+ +......||- +. .+...||-+|.| |.|.|-.
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~-~~~~~~~~~~--------l~------~~~~~vi~~D~~-G~G~S~~ 87 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQD-NEWLIGPGRA--------LD------PEKYFIIIPNMF-GNGLSSS 87 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCccc-chhhccCCCc--------cC------cCceEEEEecCC-CCCCCCC
Confidence 45677664432 123456778877665554433 2111111111 11 135789999965 9998853
Q ss_pred cCCC--Cccc--CChHHhHHHHHHHHHHHHHHCCCCCCCC-eEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEe
Q 016010 186 STKS--DYEL--NGDKLTAQDSYTFLVNWLERFPQYKKRD-FYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAI 260 (397)
Q Consensus 186 ~~~~--~~~~--~~d~~~A~d~~~fL~~f~~~fP~~~~~~-~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~I 260 (397)
.... .+.. ......++++........+. +.-.+ .+|+|+|+||..+-.+|.+--+. ++++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P~~----------V~~Lvl 154 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYPDM----------VERAAP 154 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCHHH----------Hhhhee
Confidence 2211 1110 00112344544322222232 34456 57899999999998888764332 666666
Q ss_pred ecccc
Q 016010 261 GNALI 265 (397)
Q Consensus 261 GNg~i 265 (397)
.++..
T Consensus 155 i~~~~ 159 (339)
T PRK07581 155 IAGTA 159 (339)
T ss_pred eecCC
Confidence 65543
No 60
>PRK10985 putative hydrolase; Provisional
Probab=95.51 E-value=0.079 Score=52.49 Aligned_cols=128 Identities=20% Similarity=0.277 Sum_probs=62.2
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHh-hhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccc
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGA-MSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~-~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy 184 (397)
|..+.+++.+....+.++|+||.++|.+|++...+.. +.+ .+.. +-.+++-+|. .|.|-|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~------~G~~v~~~d~-rG~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQK------RGWLGVVMHF-RGCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHH------CCCEEEEEeC-CCCCCCc
Confidence 4444444444333456789999999999975432211 111 0111 1134556674 4555332
Q ss_pred ccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 185 SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 185 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
......+. .+. .+|+..++. ++.+ ++...+++++|+|.||..+-..+.. ... ...++++++.++-
T Consensus 103 ~~~~~~~~-~~~---~~D~~~~i~-~l~~--~~~~~~~~~vG~S~GG~i~~~~~~~---~~~-----~~~~~~~v~i~~p 167 (324)
T PRK10985 103 NRLHRIYH-SGE---TEDARFFLR-WLQR--EFGHVPTAAVGYSLGGNMLACLLAK---EGD-----DLPLDAAVIVSAP 167 (324)
T ss_pred cCCcceEC-CCc---hHHHHHHHH-HHHH--hCCCCCEEEEEecchHHHHHHHHHh---hCC-----CCCccEEEEEcCC
Confidence 11111111 122 334443333 3332 2334579999999999765443332 211 2236665555555
Q ss_pred cC
Q 016010 265 ID 266 (397)
Q Consensus 265 id 266 (397)
.+
T Consensus 168 ~~ 169 (324)
T PRK10985 168 LM 169 (324)
T ss_pred CC
Confidence 44
No 61
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=95.50 E-value=0.024 Score=51.26 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=50.3
Q ss_pred ceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCC
Q 016010 170 NVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTK 249 (397)
Q Consensus 170 nvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~ 249 (397)
+|+-+| +.|.|+|....... .+.-+.+++...+..++++. ..+++++.|+|+||..+-.+|..--
T Consensus 2 ~vi~~d-~rG~g~S~~~~~~~----~~~~~~~~~~~~~~~~~~~l---~~~~~~~vG~S~Gg~~~~~~a~~~p------- 66 (230)
T PF00561_consen 2 DVILFD-LRGFGYSSPHWDPD----FPDYTTDDLAADLEALREAL---GIKKINLVGHSMGGMLALEYAAQYP------- 66 (230)
T ss_dssp EEEEEE-CTTSTTSSSCCGSG----SCTHCHHHHHHHHHHHHHHH---TTSSEEEEEETHHHHHHHHHHHHSG-------
T ss_pred EEEEEe-CCCCCCCCCCccCC----cccccHHHHHHHHHHHHHHh---CCCCeEEEEECCChHHHHHHHHHCc-------
Confidence 578889 78999997310011 22234556666666666654 3345999999999987766664321
Q ss_pred CceeeeeeeEeeccc
Q 016010 250 NTVINLKGIAIGNAL 264 (397)
Q Consensus 250 ~~~inLkGI~IGNg~ 264 (397)
-.+++|++.++.
T Consensus 67 ---~~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 ---ERVKKLVLISPP 78 (230)
T ss_dssp ---GGEEEEEEESES
T ss_pred ---hhhcCcEEEeee
Confidence 258899888885
No 62
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=95.43 E-value=0.19 Score=50.18 Aligned_cols=154 Identities=18% Similarity=0.127 Sum_probs=85.7
Q ss_pred CCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhc-------CCeEEcCCCCccccC---CCCc-ccccceE
Q 016010 104 KTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSEL-------GPFRVNKDGKTLFRN---NYAW-NNVANVV 172 (397)
Q Consensus 104 ~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~-------GP~~v~~~~~~l~~N---~~sW-~~~anvL 172 (397)
.+|..|+++..+.. ..+.+|+.++|==+-+.. -.+.-+ +|+.|+.+.. ..++ -..+ .+-..|+
T Consensus 5 ~~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~ 78 (332)
T TIGR01607 5 KDGLLLKTYSWIVK---NAIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVY 78 (332)
T ss_pred CCCCeEEEeeeecc---CCeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEE
Confidence 35677888877663 356899999984333321 122111 2333322210 0001 0122 2346799
Q ss_pred EeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHH--------C--------CCCC-CCCeEEEecccccccch
Q 016010 173 FLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLER--------F--------PQYK-KRDFYIAGESYAGHYVP 235 (397)
Q Consensus 173 fiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~--------f--------P~~~-~~~~yi~GESYgG~yvP 235 (397)
-+| -.|.|.|-+.........+-+..++|+..+++..-+. + .++. +.|+||.|+|.||..+-
T Consensus 79 ~~D-~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 79 GLD-LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIAL 157 (332)
T ss_pred Eec-ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHH
Confidence 999 5899998754221111114456677888877765331 0 0233 67899999999998777
Q ss_pred HHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 236 QLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 236 ~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
.++...-+.... .....++|+++..|.+.
T Consensus 158 ~~~~~~~~~~~~--~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 158 RLLELLGKSNEN--NDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHHhcccccc--ccccccceEEEeccceE
Confidence 666544221100 01246899988887764
No 63
>PLN02511 hydrolase
Probab=95.40 E-value=0.15 Score=52.20 Aligned_cols=134 Identities=19% Similarity=0.170 Sum_probs=75.5
Q ss_pred EEEecCCCCceEEEEEEec--CCCCCCCCeEEEEcCCCChhHhhHH-hhhhcCCeEEcCCCCccccCCCCcccccceEEe
Q 016010 98 YVTVDPKTGRSLFYYFAES--PQNSSTNPLLLWLNGGPGCSSLGYG-AMSELGPFRVNKDGKTLFRNNYAWNNVANVVFL 174 (397)
Q Consensus 98 yl~v~~~~~~~lFy~f~ea--~~~~~~~PlvlWLnGGPGcSS~~~g-~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfi 174 (397)
++... +|..+.+..+.. ...+.++|+||.|+|..|+|.-.|- .+.. .+ ..+-.+++-+
T Consensus 75 ~l~~~--DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------~~------~~~g~~vv~~ 135 (388)
T PLN02511 75 CLRTP--DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------RA------RSKGWRVVVF 135 (388)
T ss_pred EEECC--CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------HH------HHCCCEEEEE
Confidence 55553 455565544432 2245678999999999988742121 1110 00 1134578999
Q ss_pred eCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceee
Q 016010 175 ESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN 254 (397)
Q Consensus 175 DqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~in 254 (397)
|. .|.|-|-..... +. ....++|+..++...-.++| ..+++++|+|.||..+-.++. ++.+ ...
T Consensus 136 d~-rG~G~s~~~~~~-~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~---~~~~-----~~~ 199 (388)
T PLN02511 136 NS-RGCADSPVTTPQ-FY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLG---EEGE-----NCP 199 (388)
T ss_pred ec-CCCCCCCCCCcC-EE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHH---hcCC-----CCC
Confidence 94 678877432222 21 12345677666665555554 468999999999987544442 2221 234
Q ss_pred eeeeEeeccccC
Q 016010 255 LKGIAIGNALID 266 (397)
Q Consensus 255 LkGI~IGNg~id 266 (397)
+++.++.++-.|
T Consensus 200 v~~~v~is~p~~ 211 (388)
T PLN02511 200 LSGAVSLCNPFD 211 (388)
T ss_pred ceEEEEECCCcC
Confidence 666655444334
No 64
>PLN00021 chlorophyllase
Probab=95.27 E-value=0.071 Score=53.23 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=65.9
Q ss_pred CCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHh
Q 016010 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (397)
Q Consensus 120 ~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (397)
....|+|||++|+.+.... |..+.+. +. +| -..|+.+|-+- ++..... .+...
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~~-----------La----s~--G~~VvapD~~g---~~~~~~~------~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQH-----------IA----SH--GFIVVAPQLYT---LAGPDGT------DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHHH-----------HH----hC--CCEEEEecCCC---cCCCCch------hhHHH
Confidence 4568999999998776654 4333321 10 11 13456666432 2211111 22233
Q ss_pred HHHHHHHHHHHHHH-CC---CCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 200 AQDSYTFLVNWLER-FP---QYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 200 A~d~~~fL~~f~~~-fP---~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
+.++..++.+-++. .| +....+++|+|+|.||+.+-.+|....+.. ....+++++..+++...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccccc
Confidence 55556666554432 12 233457999999999998877776433211 13568898888887544
No 65
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.26 E-value=0.052 Score=58.04 Aligned_cols=131 Identities=19% Similarity=0.155 Sum_probs=78.3
Q ss_pred CCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcc-cccceEEeeCCCCccc
Q 016010 104 KTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWN-NVANVVFLESPAGVGF 182 (397)
Q Consensus 104 ~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~-~~anvLfiDqP~GvGf 182 (397)
.+|..|+.+++... +....|+||.++|-...+... .+... . ...-|. +-..++-+| ..|.|.
T Consensus 4 ~DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~------~~~~~---~------~~~~l~~~Gy~vv~~D-~RG~g~ 66 (550)
T TIGR00976 4 RDGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLR------WGLDK---T------EPAWFVAQGYAVVIQD-TRGRGA 66 (550)
T ss_pred CCCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhc------ccccc---c------cHHHHHhCCcEEEEEe-cccccc
Confidence 35678887776543 234679999999743322110 00000 0 001122 246789999 689999
Q ss_pred ccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeec
Q 016010 183 SYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGN 262 (397)
Q Consensus 183 Sy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGN 262 (397)
|-+.... + + ...++|+..++. |+.+-|. ...++.++|+||||...-.+|.. + .-.||+|+..+
T Consensus 67 S~g~~~~-~---~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~-------~~~l~aiv~~~ 129 (550)
T TIGR00976 67 SEGEFDL-L---G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---Q-------PPALRAIAPQE 129 (550)
T ss_pred CCCceEe-c---C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---C-------CCceeEEeecC
Confidence 9653211 1 2 345667766555 7776654 34589999999999765544431 1 23599999988
Q ss_pred cccCCc
Q 016010 263 ALIDGP 268 (397)
Q Consensus 263 g~id~~ 268 (397)
+..|..
T Consensus 130 ~~~d~~ 135 (550)
T TIGR00976 130 GVWDLY 135 (550)
T ss_pred cccchh
Confidence 887754
No 66
>PRK10162 acetyl esterase; Provisional
Probab=95.25 E-value=0.16 Score=50.44 Aligned_cols=63 Identities=11% Similarity=0.043 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 200 A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
+.+.+.++.+.-+.+ .....+++|+|+|.||+.+-.++...-+... ....++|+++..|++|.
T Consensus 135 ~~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 334445554443333 2234579999999999999988877654321 12457899999998875
No 67
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=94.78 E-value=0.11 Score=54.46 Aligned_cols=81 Identities=19% Similarity=0.172 Sum_probs=51.6
Q ss_pred ccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC
Q 016010 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
..||+-+|-|-+..-.|.. .. .+...+|+++..||....+.. .+.-.+++|.|+|.|||.+-.+|.+.
T Consensus 73 d~nVI~VDw~g~g~s~y~~-a~----~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~------ 140 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPT-SA----AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT------ 140 (442)
T ss_pred CCEEEEEECCCcCCCCCcc-cc----ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC------
Confidence 4799999987443222321 11 134567777777776544333 35567899999999999887776532
Q ss_pred CCCceeeeeeeEeeccc
Q 016010 248 TKNTVINLKGIAIGNAL 264 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg~ 264 (397)
.-.+.+|.+.+|.
T Consensus 141 ----p~rV~rItgLDPA 153 (442)
T TIGR03230 141 ----KHKVNRITGLDPA 153 (442)
T ss_pred ----CcceeEEEEEcCC
Confidence 1236777777764
No 68
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=94.57 E-value=0.21 Score=49.61 Aligned_cols=129 Identities=19% Similarity=0.173 Sum_probs=82.6
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccc
Q 016010 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (397)
Q Consensus 105 ~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy 184 (397)
.|..||.-......+++.+-+|+.++|.-+=+|..|--+.. +++.. -.-|..+|+ .|.|.|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~----~l~~~-------------g~~v~a~D~-~GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK----RLAKS-------------GFAVYAIDY-EGHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH----HHHhC-------------CCeEEEeec-cCCCcCC
Confidence 46788887666655567888999999965555432321211 01111 123677895 7899986
Q ss_pred ccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 185 SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 185 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
+ -..|. .+-+...+|...|+..+- ..+++++.+.|++|||-||..+-.++.+ . +--..|+++..|.
T Consensus 98 G--l~~yi-~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k----~------p~~w~G~ilvaPm 163 (313)
T KOG1455|consen 98 G--LHAYV-PSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK----D------PNFWDGAILVAPM 163 (313)
T ss_pred C--CcccC-CcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh----C------Ccccccceeeecc
Confidence 4 33343 255667777777776644 4578999999999999999766555543 1 2236777766665
Q ss_pred c
Q 016010 265 I 265 (397)
Q Consensus 265 i 265 (397)
.
T Consensus 164 c 164 (313)
T KOG1455|consen 164 C 164 (313)
T ss_pred c
Confidence 4
No 69
>PRK10115 protease 2; Provisional
Probab=94.42 E-value=0.072 Score=58.72 Aligned_cols=143 Identities=15% Similarity=0.082 Sum_probs=79.5
Q ss_pred EEEEecCCCCceEEEEEEecCC--CCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEe
Q 016010 97 GYVTVDPKTGRSLFYYFAESPQ--NSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFL 174 (397)
Q Consensus 97 Gyl~v~~~~~~~lFy~f~ea~~--~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfi 174 (397)
=.+.+...+|..+-.|++-.+. .....|+||+.+||||.+... +...+. ..|.+.-=++.+
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~----------------~~l~~rG~~v~~ 479 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSR----------------LSLLDRGFVYAI 479 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHH----------------HHHHHCCcEEEE
Confidence 3455555677888877665332 234569999999999998652 222221 123333223333
Q ss_pred eCCCCcccccccC--CC-CcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCc
Q 016010 175 ESPAGVGFSYSST--KS-DYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNT 251 (397)
Q Consensus 175 DqP~GvGfSy~~~--~~-~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~ 251 (397)
=.+.|.| .|+.. .. ... .-..+-+|+..... |+..-.--....+.|.|-||||--+ ..++.+.
T Consensus 480 ~n~RGs~-g~G~~w~~~g~~~--~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~----~~~~~~~------ 545 (686)
T PRK10115 480 VHVRGGG-ELGQQWYEDGKFL--KKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLM----GVAINQR------ 545 (686)
T ss_pred EEcCCCC-ccCHHHHHhhhhh--cCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHH----HHHHhcC------
Confidence 3356543 33221 00 000 10133456655554 3433322344569999999999743 3333322
Q ss_pred eeeeeeeEeeccccCCccc
Q 016010 252 VINLKGIAIGNALIDGPTR 270 (397)
Q Consensus 252 ~inLkGI~IGNg~id~~~q 270 (397)
+=.+++++.+.|++|....
T Consensus 546 Pdlf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 546 PELFHGVIAQVPFVDVVTT 564 (686)
T ss_pred hhheeEEEecCCchhHhhh
Confidence 1249999999999998753
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.19 E-value=0.06 Score=49.56 Aligned_cols=92 Identities=13% Similarity=0.038 Sum_probs=57.3
Q ss_pred ccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC
Q 016010 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
=..|+.+|.+-+.||+..-....... .-....+|+...++...++ +......++|+|.||||+.+-.++. ++
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~-~~iD~~ri~i~G~S~GG~~a~~~~~---~~--- 85 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQ-YYIDPDRIGIMGHSYGGYLALLAAT---QH--- 85 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHT-TSEEEEEEEEEEETHHHHHHHHHHH---HT---
T ss_pred CEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhcc-ccccceeEEEEcccccccccchhhc---cc---
Confidence 46789999887777775322211111 2224456666655544444 3555667999999999987776655 22
Q ss_pred CCCceeeeeeeEeeccccCCcccc
Q 016010 248 TKNTVINLKGIAIGNALIDGPTRS 271 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg~id~~~q~ 271 (397)
.-.++.++.++|.+|.....
T Consensus 86 ----~~~f~a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 86 ----PDRFKAAVAGAGVSDLFSYY 105 (213)
T ss_dssp ----CCGSSEEEEESE-SSTTCSB
T ss_pred ----ceeeeeeeccceecchhccc
Confidence 22378999999999987644
No 71
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=93.86 E-value=0.42 Score=47.86 Aligned_cols=138 Identities=17% Similarity=0.152 Sum_probs=90.1
Q ss_pred ceeEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccce
Q 016010 92 FDQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANV 171 (397)
Q Consensus 92 ~~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anv 171 (397)
.....+|++++. +++++.|. .++..|++|.|+|=|=.+=. +-.- ...|.. .-..+
T Consensus 20 ~~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wys-wr~q-----------~~~la~------~~~rv 74 (322)
T KOG4178|consen 20 SAISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYS-WRHQ-----------IPGLAS------RGYRV 74 (322)
T ss_pred hhcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchh-hhhh-----------hhhhhh------cceEE
Confidence 345677888853 88888888 78899999999998877643 2000 001110 11568
Q ss_pred EEeeCCCCcccccccCC-CCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCC
Q 016010 172 VFLESPAGVGFSYSSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN 250 (397)
Q Consensus 172 LfiDqP~GvGfSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~ 250 (397)
+.+| -.|.|+|-.-.. .+| +-...+.|+..+|.. +...++++.||+||+..+=.||..--++-+
T Consensus 75 iA~D-lrGyG~Sd~P~~~~~Y---t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~---- 139 (322)
T KOG4178|consen 75 IAPD-LRGYGFSDAPPHISEY---TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVD---- 139 (322)
T ss_pred EecC-CCCCCCCCCCCCccee---eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcc----
Confidence 9999 579999965444 223 445566676665553 345679999999999888777776555432
Q ss_pred ceeeeeeeEeeccccCCccc
Q 016010 251 TVINLKGIAIGNALIDGPTR 270 (397)
Q Consensus 251 ~~inLkGI~IGNg~id~~~q 270 (397)
..+++++... |+..++...
T Consensus 140 ~lv~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 140 GLVTLNVPFP-NPKLKPLDS 158 (322)
T ss_pred eEEEecCCCC-Ccccchhhh
Confidence 2455555555 777777553
No 72
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.80 E-value=0.27 Score=54.94 Aligned_cols=137 Identities=21% Similarity=0.147 Sum_probs=78.6
Q ss_pred CceEEEEEEecCC--CCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCccc-ccceEEeeCCCCccc
Q 016010 106 GRSLFYYFAESPQ--NSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGF 182 (397)
Q Consensus 106 ~~~lFy~f~ea~~--~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvLfiDqP~GvGf 182 (397)
|-.+++++.-.++ +.+.-||+++..||||.-+.. + =|+ +..|.+.+.. -+=|+.|| +.|+|+
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~------~~~-------~~~~~~~~s~~g~~v~~vd-~RGs~~ 571 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-S------KFS-------VDWNEVVVSSRGFAVLQVD-GRGSGG 571 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-e------eEE-------ecHHHHhhccCCeEEEEEc-CCCcCC
Confidence 4566677776553 334569999999999932221 1 111 2223333333 24578899 899986
Q ss_pred ccccC--CCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEe
Q 016010 183 SYSST--KSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAI 260 (397)
Q Consensus 183 Sy~~~--~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~I 260 (397)
.- .+ ...+..-++.+ .+|.....+.+.+.+ ..-...+.|+|-|||| .++..++.+.+ .--+|.-+-
T Consensus 572 ~G-~~~~~~~~~~lG~~e-v~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGG----y~t~~~l~~~~-----~~~fkcgva 639 (755)
T KOG2100|consen 572 YG-WDFRSALPRNLGDVE-VKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGG----YLTLKLLESDP-----GDVFKCGVA 639 (755)
T ss_pred cc-hhHHHHhhhhcCCcc-hHHHHHHHHHHHhcc-cccHHHeEEeccChHH----HHHHHHhhhCc-----CceEEEEEE
Confidence 52 22 11111123333 345555555555554 3333459999999999 45566665532 123666678
Q ss_pred eccccCCcc
Q 016010 261 GNALIDGPT 269 (397)
Q Consensus 261 GNg~id~~~ 269 (397)
.+|++|...
T Consensus 640 vaPVtd~~~ 648 (755)
T KOG2100|consen 640 VAPVTDWLY 648 (755)
T ss_pred ecceeeeee
Confidence 889988763
No 73
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=92.58 E-value=0.32 Score=46.47 Aligned_cols=124 Identities=23% Similarity=0.345 Sum_probs=80.3
Q ss_pred ceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccccc
Q 016010 107 RSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSS 186 (397)
Q Consensus 107 ~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~ 186 (397)
-.|.=|...+++ ++|.+|+++|--|- | |.+.-+ .+ .... +=..||+-+| =.|.|-|-+.
T Consensus 65 vtL~a~~~~~E~---S~pTlLyfh~NAGN--m--Ghr~~i------~~--~fy~-----~l~mnv~ivs-YRGYG~S~Gs 123 (300)
T KOG4391|consen 65 VTLDAYLMLSES---SRPTLLYFHANAGN--M--GHRLPI------AR--VFYV-----NLKMNVLIVS-YRGYGKSEGS 123 (300)
T ss_pred eeEeeeeecccC---CCceEEEEccCCCc--c--cchhhH------HH--HHHH-----HcCceEEEEE-eeccccCCCC
Confidence 345545554432 88999999986554 2 222211 01 0111 1257888888 6899999775
Q ss_pred CCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 187 TKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 187 ~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
.+.. +....|+.. ..++-..|...+++++++|.|-||..+-.+|.+-.+ .+.++++-|-+++
T Consensus 124 psE~----GL~lDs~av----ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~----------ri~~~ivENTF~S 185 (300)
T KOG4391|consen 124 PSEE----GLKLDSEAV----LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD----------RISAIIVENTFLS 185 (300)
T ss_pred cccc----ceeccHHHH----HHHHhcCccCCcceEEEEecccCCeeEEEeeccchh----------heeeeeeechhcc
Confidence 4431 323333332 234457789999999999999999999888875432 4899999999988
Q ss_pred Ccc
Q 016010 267 GPT 269 (397)
Q Consensus 267 ~~~ 269 (397)
-..
T Consensus 186 Ip~ 188 (300)
T KOG4391|consen 186 IPH 188 (300)
T ss_pred chh
Confidence 633
No 74
>PRK11460 putative hydrolase; Provisional
Probab=92.29 E-value=0.84 Score=43.18 Aligned_cols=24 Identities=8% Similarity=-0.114 Sum_probs=18.6
Q ss_pred CCCCCCeEEEecccccccchHHHH
Q 016010 216 QYKKRDFYIAGESYAGHYVPQLAY 239 (397)
Q Consensus 216 ~~~~~~~yi~GESYgG~yvP~lA~ 239 (397)
....++++|.|.|.||..+-.++.
T Consensus 99 ~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 99 GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred CCChhhEEEEEECHHHHHHHHHHH
Confidence 344567999999999988866554
No 75
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=92.22 E-value=1 Score=41.52 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=64.9
Q ss_pred eEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCccc-ccceEEeeCCCCcccccccCCCCcccCChHHhHHHH
Q 016010 125 LLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNN-VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDS 203 (397)
Q Consensus 125 lvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~ 203 (397)
.|+++.+|=|.++. |--+... + .+ ..+|..|+. .|-+ . ..... .+-++.|+..
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~~-----------l-------~~~~~~v~~i~~-~~~~---~--~~~~~-~si~~la~~y 55 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLARA-----------L-------PDDVIGVYGIEY-PGRG---D--DEPPP-DSIEELASRY 55 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHHH-----------H-------TTTEEEEEEECS-TTSC---T--TSHEE-SSHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHHh-----------C-------CCCeEEEEEEec-CCCC---C--CCCCC-CCHHHHHHHH
Confidence 57889988776555 4433321 1 12 367888884 4444 1 11111 2555666665
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 204 ~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
...|+ ..-|+ .+++|+|.|+||..+=.+|.++.+.. ...+.|++.++..
T Consensus 56 ~~~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 56 AEAIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSPP 104 (229)
T ss_dssp HHHHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCSS
T ss_pred HHHhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCCC
Confidence 55554 34333 39999999999999999999998764 3478888888654
No 76
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=92.16 E-value=1.3 Score=43.14 Aligned_cols=121 Identities=17% Similarity=0.266 Sum_probs=77.3
Q ss_pred CCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCC----CcccCChHH
Q 016010 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKS----DYELNGDKL 198 (397)
Q Consensus 123 ~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~----~~~~~~d~~ 198 (397)
+++++|+-|=||.-.. |--|.+ .|..+- +....|+=+.. .||+...... +....+-++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecC---CCCcCCcccccccCCCCccCHHH
Confidence 6899999999999988 776663 233221 33445555542 4555443331 111237778
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcc
Q 016010 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~ 269 (397)
+-+.-++|+.++....+ ..+.+++|.|||=|+. ++.+|+.+.. ....+++++++-=|.+....
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGay----i~levl~r~~---~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAY----IALEVLKRLP---DLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHH----HHHHHHHhcc---ccCCceeEEEEeCCcccccc
Confidence 88888999998887654 2567899999999875 4555555433 12466777777767665543
No 77
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=92.14 E-value=1.4 Score=43.54 Aligned_cols=138 Identities=17% Similarity=0.139 Sum_probs=85.2
Q ss_pred eEEEEEEecCCCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEE
Q 016010 94 QYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVF 173 (397)
Q Consensus 94 ~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLf 173 (397)
.--|+.... .+..++|+.+++.+++. .+|++++|.=..+.- |-.+-+. +.. .=..|+=
T Consensus 9 ~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~~-----------l~~------~G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELADD-----------LAA------RGFDVYA 66 (298)
T ss_pred cccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHHH-----------HHh------CCCEEEE
Confidence 334444443 46789999998865444 899999998666554 4333321 111 2356788
Q ss_pred eeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCcee
Q 016010 174 LESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVI 253 (397)
Q Consensus 174 iDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~i 253 (397)
+|. .|-|.|.. ....... +-...-.|+..|++..-+. ....++||+|||-||-.+...+..- .-
T Consensus 67 ~D~-RGhG~S~r-~~rg~~~-~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~----------~~ 130 (298)
T COG2267 67 LDL-RGHGRSPR-GQRGHVD-SFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLARY----------PP 130 (298)
T ss_pred ecC-CCCCCCCC-CCcCCch-hHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhC----------Cc
Confidence 895 68999963 1111110 1223334444444443332 4567999999999997665544432 24
Q ss_pred eeeeeEeeccccCCcc
Q 016010 254 NLKGIAIGNALIDGPT 269 (397)
Q Consensus 254 nLkGI~IGNg~id~~~ 269 (397)
+++|+++-+|.+....
T Consensus 131 ~i~~~vLssP~~~l~~ 146 (298)
T COG2267 131 RIDGLVLSSPALGLGG 146 (298)
T ss_pred cccEEEEECccccCCh
Confidence 6999999999998873
No 78
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=90.53 E-value=1.2 Score=46.52 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHH
Q 016010 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLA 238 (397)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA 238 (397)
.....++++++-.+.|. -..+++.|+|+|.||+-+-.++
T Consensus 156 D~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 156 DQRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 34455677777777774 3455799999999997654433
No 79
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=90.37 E-value=2.2 Score=40.63 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=35.7
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 204 ~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
...|.+.+......-.+.+|++|.|-||...-.|+..-- =-+.++++..|..-
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p----------d~faa~a~~sG~~~ 133 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYP----------DLFAAVAVVSGVPY 133 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCC----------ccceEEEeeccccc
Confidence 444555555544556778999999999977766665321 23778888887643
No 80
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=89.48 E-value=3 Score=43.29 Aligned_cols=132 Identities=20% Similarity=0.291 Sum_probs=77.7
Q ss_pred EEEEecCCCCceEEEEEEecCC----CCCCCCeEEEEcCCCChhHhh-----HHhhhhcCCeEEcCCCCccccCCCCccc
Q 016010 97 GYVTVDPKTGRSLFYYFAESPQ----NSSTNPLLLWLNGGPGCSSLG-----YGAMSELGPFRVNKDGKTLFRNNYAWNN 167 (397)
Q Consensus 97 Gyl~v~~~~~~~lFy~f~ea~~----~~~~~PlvlWLnGGPGcSS~~-----~g~~~E~GP~~v~~~~~~l~~N~~sW~~ 167 (397)
=+|...+ .|.-..=|+..... +..++|+||.|.|=.|.|.-. ....++.| +++
T Consensus 96 eii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~---------------- 157 (409)
T KOG1838|consen 96 EIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV---------------- 157 (409)
T ss_pred EEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE----------------
Confidence 3555543 23334445544332 357889999999988888421 23444545 332
Q ss_pred ccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC
Q 016010 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
+=+. +.|.|-|--+++.-|.- +.. +|+-.++.---++||+ +++|.+|.|+||.. +.+++-+..++
T Consensus 158 ----VVfN-~RG~~g~~LtTpr~f~a-g~t---~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~i---L~nYLGE~g~~ 222 (409)
T KOG1838|consen 158 ----VVFN-HRGLGGSKLTTPRLFTA-GWT---EDLREVVNHIKKRYPQ---APLFAVGFSMGGNI---LTNYLGEEGDN 222 (409)
T ss_pred ----EEEC-CCCCCCCccCCCceeec-CCH---HHHHHHHHHHHHhCCC---CceEEEEecchHHH---HHHHhhhccCC
Confidence 1122 68888887666554432 332 3444444433356665 58999999999974 45565554332
Q ss_pred CCCceeeeeeeEeecccc
Q 016010 248 TKNTVINLKGIAIGNALI 265 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg~i 265 (397)
.-=..|++|-|||=
T Consensus 223 ----~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 223 ----TPLIAAVAVCNPWD 236 (409)
T ss_pred ----CCceeEEEEeccch
Confidence 23367889999985
No 81
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=89.36 E-value=0.89 Score=38.25 Aligned_cols=94 Identities=20% Similarity=0.264 Sum_probs=55.7
Q ss_pred eEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHH
Q 016010 125 LLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSY 204 (397)
Q Consensus 125 lvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~ 204 (397)
+||+++|+.|.... |..+.+. +.. +-.+++.+|. .|.|.+.. ....++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~~-----------l~~------~G~~v~~~~~-~~~~~~~~-----------~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAEA-----------LAE------QGYAVVAFDY-PGHGDSDG-----------ADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHHH-----------HHH------TTEEEEEESC-TTSTTSHH-----------SHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHHH-----------HHH------CCCEEEEEec-CCCCccch-----------hHHHHHHH
Confidence 68999999776555 5555431 111 1356777774 34443310 11233333
Q ss_pred HHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 205 TFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 205 ~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
..+. ...+ ..++++|+|+|.||..+..++.. + -.+++++.-+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~----~-------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAAR----N-------PRVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHH----S-------TTESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhh----c-------cceeEEEEecCc
Confidence 3222 3333 55789999999999977777662 1 238888888884
No 82
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=88.59 E-value=4.6 Score=40.25 Aligned_cols=140 Identities=15% Similarity=0.087 Sum_probs=68.8
Q ss_pred CCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcC-CeEEcCCCCccc-cCCCCcccccceEEeeCCCC--c
Q 016010 105 TGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELG-PFRVNKDGKTLF-RNNYAWNNVANVVFLESPAG--V 180 (397)
Q Consensus 105 ~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~G-P~~v~~~~~~l~-~N~~sW~~~anvLfiDqP~G--v 180 (397)
.+..++|.-+... +...+|.||.++|=+|.+-.. ...+.+ |=.+. .+. ....--.+...|+-+|.| | .
T Consensus 14 ~~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~--~~~~~~~~~~w~----~~~~~~~~l~~~~~~vi~~D~~-G~~~ 85 (351)
T TIGR01392 14 SDVRVAYETYGTL-NAERSNAVLVCHALTGDAHVA--GYHDDGDPGWWD----DLIGPGRAIDTDRYFVVCSNVL-GGCY 85 (351)
T ss_pred CCceEEEEecccc-CCCCCCEEEEcCCcCcchhhc--ccCCCCCCCchh----hccCCCCCcCCCceEEEEecCC-CCCC
Confidence 3567888755431 123468899999876654331 111100 00000 000 000001245689999965 5 4
Q ss_pred ccccccC--CC--CcccCChHHhHHHHHHHHHHHHHHCCCCCCCC-eEEEecccccccchHHHHHHHHhccCCCCceeee
Q 016010 181 GFSYSST--KS--DYELNGDKLTAQDSYTFLVNWLERFPQYKKRD-FYIAGESYAGHYVPQLAYTILLNNKNTKNTVINL 255 (397)
Q Consensus 181 GfSy~~~--~~--~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~-~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inL 255 (397)
|-|-..+ .. .+.......+.+++...+..+++.. .-.+ ++|+|+|.||..+-.+|..- +-.+
T Consensus 86 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~----------p~~v 152 (351)
T TIGR01392 86 GSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDY----------PERV 152 (351)
T ss_pred CCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHC----------hHhh
Confidence 4331100 00 0100000122334444444444443 3345 99999999998777777642 1237
Q ss_pred eeeEeecccc
Q 016010 256 KGIAIGNALI 265 (397)
Q Consensus 256 kGI~IGNg~i 265 (397)
+++++.++..
T Consensus 153 ~~lvl~~~~~ 162 (351)
T TIGR01392 153 RAIVVLATSA 162 (351)
T ss_pred heEEEEccCC
Confidence 8888877654
No 83
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=88.43 E-value=0.67 Score=43.04 Aligned_cols=60 Identities=12% Similarity=0.074 Sum_probs=36.0
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcc
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~ 269 (397)
..++.+.+++....+. ....++++|.|-|-||...-.++.+ . +-.|.|++.-+|++-...
T Consensus 85 ~s~~~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l~----~------p~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 85 ESAERLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLALR----Y------PEPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHHC----T------SSTSSEEEEES---TTGC
T ss_pred HHHHHHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHHH----c------CcCcCEEEEeeccccccc
Confidence 3444555555554443 2566789999999999766666532 1 225889999999886543
No 84
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=88.17 E-value=1.2 Score=50.02 Aligned_cols=83 Identities=22% Similarity=0.308 Sum_probs=54.2
Q ss_pred cccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCC--------------CCCCCCeEEEecccccc
Q 016010 167 NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFP--------------QYKKRDFYIAGESYAGH 232 (397)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP--------------~~~~~~~yi~GESYgG~ 232 (397)
+=.+|+++| ..|+|-|-+.-.. ......+|..+ +.+|+...+ .+-+.++-++|.||+|.
T Consensus 278 rGYaVV~~D-~RGtg~SeG~~~~-----~~~~E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 278 RGFAVVYVS-GIGTRGSDGCPTT-----GDYQEIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred CCeEEEEEc-CCCCCCCCCcCcc-----CCHHHHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 457899999 7999999765322 22333445444 444776431 12345899999999997
Q ss_pred cchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 233 YVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 233 yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
..-.+|.. . .-.||.|+-..|..|
T Consensus 351 ~~~~aAa~---~-------pp~LkAIVp~a~is~ 374 (767)
T PRK05371 351 LPNAVATT---G-------VEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHhh---C-------CCcceEEEeeCCCCc
Confidence 66655542 1 235999998877766
No 85
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=88.07 E-value=0.8 Score=43.72 Aligned_cols=74 Identities=12% Similarity=0.123 Sum_probs=49.4
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCC-CCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcc
Q 016010 195 GDKLTAQDSYTFLVNWLERFPQY-KKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~~-~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~ 269 (397)
.|++.|......|..|++..-+. ..++++|.+||-|+..+-..-..+...... ....-+|..|++.+|.+|...
T Consensus 67 ~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 67 YDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHHH
Confidence 34444545455555555443333 567899999999999888877777665431 012247899999999998753
No 86
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=88.04 E-value=2.4 Score=42.61 Aligned_cols=96 Identities=17% Similarity=0.204 Sum_probs=56.8
Q ss_pred CCCCeEEEEcC-CCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHh
Q 016010 121 STNPLLLWLNG-GPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLT 199 (397)
Q Consensus 121 ~~~PlvlWLnG-GPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~ 199 (397)
.++|-||.++| |-++.+- .++ ..+.++..---|+=|| -.|-|+|-..+. +..-+
T Consensus 56 ~~~~pvlllHGF~~~~~~w-----~~~-------------~~~L~~~~~~~v~aiD-l~G~g~~s~~~~------~~~y~ 110 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSW-----RRV-------------VPLLSKAKGLRVLAID-LPGHGYSSPLPR------GPLYT 110 (326)
T ss_pred CCCCcEEEeccccCCcccH-----hhh-------------ccccccccceEEEEEe-cCCCCcCCCCCC------CCcee
Confidence 57899999998 4333332 111 0112222223478889 456664321111 22244
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHh
Q 016010 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (397)
Q Consensus 200 A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~ 244 (397)
+.+...-+..++.. +...+++|.|+||||..+=.+|....+.
T Consensus 111 ~~~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 111 LRELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred hhHHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 55666666666653 4566799999999999888888875443
No 87
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=87.79 E-value=0.36 Score=50.02 Aligned_cols=82 Identities=17% Similarity=0.124 Sum_probs=54.8
Q ss_pred ccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC
Q 016010 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
=.+||=+| =.|+|+|.... +. . ....++..+..|+..-|+.-...+.++|-|+||.|++.+|.. +.
T Consensus 218 GiA~LtvD-mPG~G~s~~~~---l~--~---D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e~--- 283 (411)
T PF06500_consen 218 GIAMLTVD-MPGQGESPKWP---LT--Q---DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--ED--- 283 (411)
T ss_dssp T-EEEEE---TTSGGGTTT----S---S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--TT---
T ss_pred CCEEEEEc-cCCCcccccCC---CC--c---CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--cc---
Confidence 35789999 46999984321 11 1 123566778888999999988899999999999999999863 11
Q ss_pred CCCceeeeeeeEeeccccCCc
Q 016010 248 TKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg~id~~ 268 (397)
-.|||++.-.|.++..
T Consensus 284 -----~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 284 -----PRLKAVVALGAPVHHF 299 (411)
T ss_dssp -----TT-SEEEEES---SCG
T ss_pred -----cceeeEeeeCchHhhh
Confidence 2389987777766654
No 88
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.28 E-value=1.9 Score=42.02 Aligned_cols=102 Identities=24% Similarity=0.443 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCC----CcccccceEEeeCCCCcccccccCCCCcccCCh
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNY----AWNNVANVVFLESPAGVGFSYSSTKSDYELNGD 196 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~----sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d 196 (397)
.++|+++|+-|-||-++. |--|.- +|..|-- -|+ +.++=-.+-|+-.==+-+.+..+. .+.
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y~~F~~-----------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~~~ei--fsL 91 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-YTEFAR-----------HLHLNLIDRLPVWT-ISHAGHALMPASLREDHSHTNEEI--FSL 91 (301)
T ss_pred CCceEEEEecCCCCchhH-HHHHHH-----------HHHHhcccccceeE-EeccccccCCcccccccccccccc--cch
Confidence 789999999999999877 554441 1111111 121 112222333421111111121122 355
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhcc
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNK 246 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~ 246 (397)
+++-+.=..|+.++.- +++++||.|||=|. ++-.+|+..++
T Consensus 92 ~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGa----Ym~Lqil~~~k 132 (301)
T KOG3975|consen 92 QDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGA----YMVLQILPSIK 132 (301)
T ss_pred hhHHHHHHHHHHHhCC-----CCCEEEEEecchhH----HHHHHHhhhcc
Confidence 5666666788887765 47899999999875 44455555443
No 89
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=86.86 E-value=5.8 Score=38.78 Aligned_cols=63 Identities=19% Similarity=0.188 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcc
Q 016010 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 200 A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~ 269 (397)
+.+.+.++.+=-..+ ....+.+.++|+|=|||-+-.++...-+.. ....++.++..|++|...
T Consensus 133 ~~~a~~~l~~~~~~~-g~dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 133 AYAAYRWLRANAAEL-GIDPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHhhhHhh-CCCccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 445555555432222 234567999999999999999998876652 345888999999999876
No 90
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=86.07 E-value=1.2 Score=43.00 Aligned_cols=83 Identities=24% Similarity=0.201 Sum_probs=55.8
Q ss_pred cceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCC
Q 016010 169 ANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNT 248 (397)
Q Consensus 169 anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 248 (397)
..++..| ..|+|-|.+.-... ....++|.++ +.+|+..-|--. -++-++|.||+|.....+|..
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~-----~~~e~~D~~d-~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~-------- 121 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM-----SPNEAQDGYD-TIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAAR-------- 121 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT-----SHHHHHHHHH-HHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTT--------
T ss_pred CEEEEEC-CcccccCCCccccC-----ChhHHHHHHH-HHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhc--------
Confidence 5688999 89999997754321 3345666665 556887775444 479999999999887777761
Q ss_pred CCceeeeeeeEeeccccCCcc
Q 016010 249 KNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 249 ~~~~inLkGI~IGNg~id~~~ 269 (397)
..-.||.|+..-+..|...
T Consensus 122 --~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 122 --RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp --T-TTEEEEEEESE-SBTCC
T ss_pred --CCCCceEEEecccCCcccc
Confidence 1345999999988887754
No 91
>PRK11071 esterase YqiA; Provisional
Probab=86.01 E-value=2.3 Score=38.99 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=32.2
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 204 ~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
..++.++.+.. ..++++|.|.|.||.++-.+|... . .+ +++.||..+|
T Consensus 48 ~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~----------~--~~-~vl~~~~~~~ 95 (190)
T PRK11071 48 AELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCF----------M--LP-AVVVNPAVRP 95 (190)
T ss_pred HHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHc----------C--CC-EEEECCCCCH
Confidence 34455555543 446899999999999888888642 1 12 3567777664
No 92
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=85.88 E-value=0.79 Score=41.70 Aligned_cols=61 Identities=20% Similarity=0.267 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 200 AQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 200 A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
+.+.+.+|.+--..+ ++...+++|+|+|=||+.+-.++..+.+... ..++++++..|++|.
T Consensus 52 ~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 52 VKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred cccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 334444444432222 3566789999999999999999988777532 239999999999887
No 93
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=85.81 E-value=3.6 Score=42.51 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=58.1
Q ss_pred ccceEEeeCCCCcccccccCC---CCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHh
Q 016010 168 VANVVFLESPAGVGFSYSSTK---SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~---~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~ 244 (397)
-|-|++||. .=-|-|..... ....--+.+++-.|+..|++.+-.++....+.++.++|-||||.-..-+-.+-
T Consensus 59 ~a~~v~lEH-RyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky--- 134 (434)
T PF05577_consen 59 GALVVALEH-RYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY--- 134 (434)
T ss_dssp TEEEEEE---TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH----
T ss_pred CCcEEEeeh-hhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC---
Confidence 466888985 44777753211 11111366788889999999888777766777999999999996443333221
Q ss_pred ccCCCCceeeeeeeEeeccccCCcccccchhhh
Q 016010 245 NKNTKNTVINLKGIAIGNALIDGPTRSMGVYEN 277 (397)
Q Consensus 245 n~~~~~~~inLkGI~IGNg~id~~~q~~~~~~f 277 (397)
+--+.|.+--+|.+....++..|.+.
T Consensus 135 -------P~~~~ga~ASSapv~a~~df~~y~~~ 160 (434)
T PF05577_consen 135 -------PHLFDGAWASSAPVQAKVDFWEYFEV 160 (434)
T ss_dssp -------TTT-SEEEEET--CCHCCTTTHHHHH
T ss_pred -------CCeeEEEEeccceeeeecccHHHHHH
Confidence 11266777777777776666555543
No 94
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=85.03 E-value=2.1 Score=36.36 Aligned_cols=62 Identities=18% Similarity=0.270 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
..+.+...|.++.+..| ...+.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+.
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCcccc
Confidence 44466677777777776 46899999999999999999988876532 2466777777777663
No 95
>COG0400 Predicted esterase [General function prediction only]
Probab=84.66 E-value=5 Score=37.83 Aligned_cols=148 Identities=18% Similarity=0.199 Sum_probs=78.0
Q ss_pred EEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCC
Q 016010 109 LFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTK 188 (397)
Q Consensus 109 lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~ 188 (397)
.|+..+++. ....+|+||||+| =|..-.. |.+. |-.+.++..-+..+. .+. ..+....|+.....
T Consensus 5 ~~~~~i~~~-~~p~~~~iilLHG-~Ggde~~---~~~~-~~~~~P~~~~is~rG-------~v~--~~g~~~~f~~~~~~ 69 (207)
T COG0400 5 PFIPRIEKP-GDPAAPLLILLHG-LGGDELD---LVPL-PELILPNATLVSPRG-------PVA--ENGGPRFFRRYDEG 69 (207)
T ss_pred cccccccCC-CCCCCcEEEEEec-CCCChhh---hhhh-hhhcCCCCeEEcCCC-------Ccc--ccCcccceeecCCC
Confidence 344444444 3456799999998 2443332 1111 112233321111111 111 22334455543322
Q ss_pred CCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 189 SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 189 ~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
. +...+....+..+.+||....+.. .....++++.|-|-|+.++-.+..+ . +-.++|+++-.|..-+.
T Consensus 70 ~-~d~edl~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~---~-------~~~~~~ail~~g~~~~~ 137 (207)
T COG0400 70 S-FDQEDLDLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLT---L-------PGLFAGAILFSGMLPLE 137 (207)
T ss_pred c-cchhhHHHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHh---C-------chhhccchhcCCcCCCC
Confidence 2 211244456777788888888775 3345689999999999876555432 2 23588888888876554
Q ss_pred cc---ccchhhhhhhccC
Q 016010 269 TR---SMGVYENLWTHAL 283 (397)
Q Consensus 269 ~q---~~~~~~f~~~~gl 283 (397)
.+ .......+..||-
T Consensus 138 ~~~~~~~~~~pill~hG~ 155 (207)
T COG0400 138 PELLPDLAGTPILLSHGT 155 (207)
T ss_pred CccccccCCCeEEEeccC
Confidence 32 2333444555553
No 96
>PLN02872 triacylglycerol lipase
Probab=84.53 E-value=2.3 Score=43.90 Aligned_cols=97 Identities=15% Similarity=0.075 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCC-----CCcccCC
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTK-----SDYELNG 195 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~-----~~~~~~~ 195 (397)
..+|.||.++|..++|.. |..- +|-+- =...|. ..-..|.-.| -.|.|+|+.... ..+...+
T Consensus 72 ~~~~~Vll~HGl~~ss~~-w~~~---~~~~s--la~~La------~~GydV~l~n-~RG~~~s~gh~~~~~~~~~fw~~s 138 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDA-WFLN---SPEQS--LGFILA------DHGFDVWVGN-VRGTRWSYGHVTLSEKDKEFWDWS 138 (395)
T ss_pred CCCCeEEEeCcccccccc-eeec---Ccccc--hHHHHH------hCCCCccccc-ccccccccCCCCCCccchhccCCc
Confidence 457899999998877766 4211 12000 000010 0123555566 368888765332 1111123
Q ss_pred hHHhH-HHHHHHHHHHHHHCCCCCCCCeEEEecccccccc
Q 016010 196 DKLTA-QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYV 234 (397)
Q Consensus 196 d~~~A-~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yv 234 (397)
-.+.| .|+-.++....+. ..++++++|+|.||...
T Consensus 139 ~~e~a~~Dl~a~id~i~~~----~~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 139 WQELALYDLAEMIHYVYSI----TNSKIFIVGHSQGTIMS 174 (395)
T ss_pred HHHHHHHHHHHHHHHHHhc----cCCceEEEEECHHHHHH
Confidence 34555 5766666665543 24689999999999644
No 97
>COG4099 Predicted peptidase [General function prediction only]
Probab=84.24 E-value=15 Score=36.89 Aligned_cols=133 Identities=20% Similarity=0.176 Sum_probs=64.7
Q ss_pred CCCceEEEEEEecC-CCCCC--CCeEEEEcCC-CChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCC
Q 016010 104 KTGRSLFYYFAESP-QNSST--NPLLLWLNGG-PGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAG 179 (397)
Q Consensus 104 ~~~~~lFy~f~ea~-~~~~~--~PlvlWLnGG-PGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~G 179 (397)
..|..|-|-||... -+|+. -||||||+|+ -|.+-..--+....|-.-... --.=.||=.|-
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~--------------pedqcfVlAPQ- 233 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAG--------------PEDQCFVLAPQ- 233 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeec--------------ccCceEEEccc-
Confidence 45788999988764 24433 3999999994 443322111122222221110 00003443333
Q ss_pred cccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeE
Q 016010 180 VGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIA 259 (397)
Q Consensus 180 vGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~ 259 (397)
|..--.|.....+. --....+.+.+=+...+..-...+|+.|-|-||.-.=+++.+.-+ -+.+.+
T Consensus 234 ----y~~if~d~e~~t~~-~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd----------fFAaa~ 298 (387)
T COG4099 234 ----YNPIFADSEEKTLL-YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD----------FFAAAV 298 (387)
T ss_pred ----ccccccccccccch-hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch----------hhheee
Confidence 22111111110111 111223333333445556667789999999999766555554322 255666
Q ss_pred eeccccC
Q 016010 260 IGNALID 266 (397)
Q Consensus 260 IGNg~id 266 (397)
...|--|
T Consensus 299 ~iaG~~d 305 (387)
T COG4099 299 PIAGGGD 305 (387)
T ss_pred eecCCCc
Confidence 6555555
No 98
>PRK13604 luxD acyl transferase; Provisional
Probab=84.03 E-value=9.9 Score=38.09 Aligned_cols=124 Identities=15% Similarity=0.213 Sum_probs=70.8
Q ss_pred CCceEEEEEEecC-CCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccc
Q 016010 105 TGRSLFYYFAESP-QNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFS 183 (397)
Q Consensus 105 ~~~~lFy~f~ea~-~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfS 183 (397)
+|..|.=|+.+.. +++..+|+||..+| .|+....+..+. .+=+.+=.++|-.|.--|+|-|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~A-----------------~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGLA-----------------EYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHHH-----------------HHHHHCCCEEEEecCCCCCCCC
Confidence 4677888888775 34566788888775 555432112222 1123345788999965567877
Q ss_pred cccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecc
Q 016010 184 YSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNA 263 (397)
Q Consensus 184 y~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg 263 (397)
-++- .+... +. ...|+ ....+|++.. ...+++|.|+|-||.-+...|. ..+++++++..|
T Consensus 80 ~G~~-~~~t~-s~--g~~Dl-~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~sp 139 (307)
T PRK13604 80 SGTI-DEFTM-SI--GKNSL-LTVVDWLNTR---GINNLGLIAASLSARIAYEVIN------------EIDLSFLITAVG 139 (307)
T ss_pred CCcc-ccCcc-cc--cHHHH-HHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc------------CCCCCEEEEcCC
Confidence 3321 11111 11 12333 2233344442 2346999999999976432221 124888999999
Q ss_pred ccC
Q 016010 264 LID 266 (397)
Q Consensus 264 ~id 266 (397)
..+
T Consensus 140 ~~~ 142 (307)
T PRK13604 140 VVN 142 (307)
T ss_pred ccc
Confidence 888
No 99
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.23 E-value=2.4 Score=36.99 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHh
Q 016010 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (397)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~ 244 (397)
.++.+...+++....+| ..+++|+|+|-||+.+-.+|..+..+
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 34444455555555545 45799999999999998888887664
No 100
>PLN02454 triacylglycerol lipase
Probab=82.06 E-value=3.7 Score=42.72 Aligned_cols=68 Identities=18% Similarity=0.262 Sum_probs=52.0
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
..+.+++...++...+++|+++. .++|+|||-||-.+--.|..|...... ...++++.|..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 45778889999999999888753 699999999998888777777665321 124567788888888765
No 101
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=79.76 E-value=2.4 Score=40.10 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHh
Q 016010 199 TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (397)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~ 244 (397)
+-.|+......|+++++ ++|+|+|+|||-|+..+-.|-+.-.+.
T Consensus 76 ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~~ 119 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIAG 119 (207)
T ss_pred hHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhcC
Confidence 44677788888888864 589999999999998777766654443
No 102
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=79.30 E-value=3.8 Score=42.41 Aligned_cols=62 Identities=21% Similarity=0.241 Sum_probs=47.2
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCC-CCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
-.+|.|...+|..-..+||..++ .++.+.|.|||| |...|+.+|. +-.+.||+=-+++.-|.
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 36899999999999999999986 789999999987 6667776663 34466666555565554
No 103
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=79.04 E-value=4.6 Score=37.75 Aligned_cols=59 Identities=17% Similarity=0.289 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
+++...+....+++| +.+++++|||-||-.+-.+|..+..+. ...+++.+..|.|-+..
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCCC
Confidence 344455555556554 457999999999998888887776553 13458888888887743
No 104
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=76.25 E-value=0.77 Score=46.30 Aligned_cols=70 Identities=16% Similarity=0.227 Sum_probs=46.8
Q ss_pred ccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHH
Q 016010 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~ 243 (397)
-.|||.||--.|..-.|... ..+...+++.+-.||+...+.+ .+...+++|+|+|-|+|.+=..++++-.
T Consensus 104 d~NVI~VDWs~~a~~~Y~~a-----~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQA-----VANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHHH-----HHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccch-----hhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 57999999766665444321 1245667777778877766433 3455689999999999988888887755
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=75.87 E-value=2.6 Score=38.99 Aligned_cols=52 Identities=21% Similarity=0.238 Sum_probs=36.8
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcccc
Q 016010 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRS 271 (397)
Q Consensus 204 ~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~q~ 271 (397)
...+.+..+. +....+.|.|.|-||.|+-.||.+. +++. ++.||.+.|....
T Consensus 46 ~~~l~~~i~~---~~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 46 IAQLEQLIEE---LKPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHHh---CCCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHH
Confidence 3444444443 3445599999999999999988754 3555 7889999997543
No 106
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=75.56 E-value=5.4 Score=37.25 Aligned_cols=65 Identities=11% Similarity=0.193 Sum_probs=52.2
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+.+++|.|+-..++.+.++ ++.+.+.|+|-|+|.-.+|.+..++-..-+ =.+++|++..+-....
T Consensus 46 tP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~~~d 110 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPSTTAD 110 (192)
T ss_pred CHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCCcce
Confidence 6688999999999988875 578899999999999999999999876543 3477777776655443
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=74.98 E-value=23 Score=41.50 Aligned_cols=103 Identities=13% Similarity=0.188 Sum_probs=63.3
Q ss_pred CCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHH
Q 016010 123 NPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQD 202 (397)
Q Consensus 123 ~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d 202 (397)
.|.++.++|+.|.+.. |..+.+. + .....++-+|.| |.|-+ . ... .+-+..|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~-----------l-------~~~~~v~~~~~~-g~~~~--~-~~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRY-----------L-------DPQWSIYGIQSP-RPDGP--M-QTA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHh-----------c-------CCCCcEEEEECC-CCCCC--C-CCC---CCHHHHHHH
Confidence 4668889998887766 6555431 1 123567778866 44422 1 111 244566666
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 203 ~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
+...+.. ..| ..+++|.|+|+||..+-.+|.++.++. ..+..+++.++.
T Consensus 1122 ~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecCC
Confidence 6655553 222 358999999999999999988776542 235555555543
No 108
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=72.92 E-value=5.5 Score=41.84 Aligned_cols=39 Identities=15% Similarity=0.012 Sum_probs=29.8
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHH
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAY 239 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 239 (397)
...+++...++..+++. ..+++.|.|||.||-++-.++.
T Consensus 143 ~~~~~Lk~lIe~~~~~~---g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 143 ETMDGLKKKLETVYKAS---GGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHc---CCCCEEEEEECHhHHHHHHHHH
Confidence 45677778888877763 5678999999999977666554
No 109
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=71.22 E-value=22 Score=36.85 Aligned_cols=36 Identities=11% Similarity=0.056 Sum_probs=23.9
Q ss_pred CCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 220 RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 220 ~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
....|+|.|+||--.-.+|-+ + +=.+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~---~-------Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLH---W-------PERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHh---C-------cccccEEEEeccce
Confidence 358999999999755555432 2 12367777777764
No 110
>PF03283 PAE: Pectinacetylesterase
Probab=71.17 E-value=39 Score=34.54 Aligned_cols=151 Identities=20% Similarity=0.210 Sum_probs=76.8
Q ss_pred ceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHh----hhhcCCeE-----EcCCC---CccccCCCCcccccceEEe
Q 016010 107 RSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGA----MSELGPFR-----VNKDG---KTLFRNNYAWNNVANVVFL 174 (397)
Q Consensus 107 ~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~----~~E~GP~~-----v~~~~---~~l~~N~~sW~~~anvLfi 174 (397)
..-.|++-++. ....+-+||.|.||=.|.+.. -- ..++|... +..+| ..-..||.=++ .|++||
T Consensus 35 S~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~-tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~v 110 (361)
T PF03283_consen 35 SPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAE-TCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFV 110 (361)
T ss_pred CCCcEEEccCC-CCCCceEEEEeccchhcCChh-HHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEE
Confidence 33346655552 345678999999999998741 22 23444322 11121 11234552222 678888
Q ss_pred eCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHH-H-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCce
Q 016010 175 ESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLE-R-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTV 252 (397)
Q Consensus 175 DqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~-~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~ 252 (397)
=-=.|.-|+=.....++....-.-....+++.+.+++. . +++ ..++.|+|.|=||.-+..-+.+|.+.=.. .
T Consensus 111 pYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~----~ 184 (361)
T PF03283_consen 111 PYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS----S 184 (361)
T ss_pred EecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc----C
Confidence 43334333321111111100011123344555555544 3 443 34699999999998877777777665321 3
Q ss_pred eeeeeeEeeccccCC
Q 016010 253 INLKGIAIGNALIDG 267 (397)
Q Consensus 253 inLkGI~IGNg~id~ 267 (397)
.+++++.=..-++|.
T Consensus 185 ~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 185 VKVKCLSDSGFFLDN 199 (361)
T ss_pred ceEEEeccccccccc
Confidence 455655544444443
No 111
>PLN02571 triacylglycerol lipase
Probab=69.78 E-value=13 Score=38.74 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=50.1
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC----CCCceeeeeeeEeeccccCC
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN----TKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~----~~~~~inLkGI~IGNg~id~ 267 (397)
.+.++++..++.+.+++|.. ...++|+|||-||-.+--.|..|....-. .....+++..+..|.|-+..
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 45678888899999988876 34699999999999888888877653211 01224567778888887764
No 112
>PLN02753 triacylglycerol lipase
Probab=65.37 E-value=17 Score=38.99 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=51.9
Q ss_pred ChHHhHHHHHHHHHHHHHHCCC--CCCCCeEEEecccccccchHHHHHHHHhc--cCCCCceeeeeeeEeeccccCC
Q 016010 195 GDKLTAQDSYTFLVNWLERFPQ--YKKRDFYIAGESYAGHYVPQLAYTILLNN--KNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~--~~~~~~yi~GESYgG~yvP~lA~~I~~~n--~~~~~~~inLkGI~IGNg~id~ 267 (397)
+...+.+++...++...+.+|. +....++|+|||-||-.+--.|..|.+.. +......+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3456778889999998888764 23457999999999998888888776532 1111224567777778777654
No 113
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=65.33 E-value=15 Score=37.36 Aligned_cols=61 Identities=26% Similarity=0.300 Sum_probs=41.8
Q ss_pred cccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCC-CCCCCCeEEEecccccccchH
Q 016010 167 NVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFP-QYKKRDFYIAGESYAGHYVPQ 236 (397)
Q Consensus 167 ~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP-~~~~~~~yi~GESYgG~yvP~ 236 (397)
..+|||... ..|||+|.+..+ -++..++ +..+.++++..+ .-+.+++.+.|+|-||-....
T Consensus 170 ~~aNvl~fN-YpGVg~S~G~~s-------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFN-YPGVGSSTGPPS-------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEEC-CCccccCCCCCC-------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 358999999 789999966432 1233333 556666665433 346688999999999976543
No 114
>PLN02719 triacylglycerol lipase
Probab=63.87 E-value=18 Score=38.69 Aligned_cols=71 Identities=17% Similarity=0.249 Sum_probs=50.7
Q ss_pred HHhHHHHHHHHHHHHHHCCCCC--CCCeEEEecccccccchHHHHHHHHhc--cCCCCceeeeeeeEeeccccCC
Q 016010 197 KLTAQDSYTFLVNWLERFPQYK--KRDFYIAGESYAGHYVPQLAYTILLNN--KNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~--~~~~yi~GESYgG~yvP~lA~~I~~~n--~~~~~~~inLkGI~IGNg~id~ 267 (397)
..+.+++...++...+.+|.+. ...++|+|||-||-.+--.|..|.+.. +......+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 4567788899999899988763 346999999999998888888887642 1111223456667777776654
No 115
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=63.41 E-value=12 Score=38.56 Aligned_cols=51 Identities=10% Similarity=-0.027 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeE-EEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFY-IAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~y-i~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
+|+.+.+..+++. +.-++++ +.|+|.||..+-++|.+--+. ++++++.++.
T Consensus 144 ~d~~~~~~~ll~~---lgi~~~~~vvG~SmGG~ial~~a~~~P~~----------v~~lv~ia~~ 195 (389)
T PRK06765 144 LDFVRVQKELIKS---LGIARLHAVMGPSMGGMQAQEWAVHYPHM----------VERMIGVIGN 195 (389)
T ss_pred HHHHHHHHHHHHH---cCCCCceEEEEECHHHHHHHHHHHHChHh----------hheEEEEecC
Confidence 3444444444443 3445676 999999999888888754332 6666666543
No 116
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=63.20 E-value=45 Score=31.51 Aligned_cols=65 Identities=20% Similarity=0.162 Sum_probs=36.3
Q ss_pred HhHHHHHHHHHHHHHHC--CCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeee-EeeccccCCcc
Q 016010 198 LTAQDSYTFLVNWLERF--PQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGI-AIGNALIDGPT 269 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~f--P~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI-~IGNg~id~~~ 269 (397)
+.++.+.+.++..++.. ..-..+++.|.|||.||.- |+.++..... ..-++++| .+|.|...+..
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlv----ar~~l~~~~~---~~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLV----ARSALSLPNY---DPDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHH----HHHHHhcccc---ccccEEEEEEEcCCCCCccc
Confidence 44555556666555543 2336678999999999952 3333322111 11234444 46777766654
No 117
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=63.11 E-value=27 Score=35.05 Aligned_cols=146 Identities=13% Similarity=0.086 Sum_probs=67.8
Q ss_pred CCCceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhH--HhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcc
Q 016010 104 KTGRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGY--GAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVG 181 (397)
Q Consensus 104 ~~~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~--g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvG 181 (397)
..|..++=|++.-++.....|.||.++|..|.+.... -.+...|=..+..|-...- .+..+..-...+..-|
T Consensus 64 ~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg------~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 64 FDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQG------GRSPDYRGSSGGTLKG 137 (320)
T ss_dssp GGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTS------SSS-B-SSBSSS-SSS
T ss_pred cCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCC------CCCCCccccCCCCCcc
Confidence 3456777777765544577899999999877754311 1233333322222211000 0000100001112222
Q ss_pred cccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEee
Q 016010 182 FSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIG 261 (397)
Q Consensus 182 fSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IG 261 (397)
+-.....+.....--.....|.+. ...|+...|+.-.+.+.++|+|-||...-.+|.. ++ .+++++..
T Consensus 138 ~~~~g~~~~~e~~yyr~~~~D~~r-avd~l~slpevD~~rI~v~G~SqGG~lal~~aaL----d~-------rv~~~~~~ 205 (320)
T PF05448_consen 138 HITRGIDDNPEDYYYRRVYLDAVR-AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL----DP-------RVKAAAAD 205 (320)
T ss_dssp STTTTTTS-TTT-HHHHHHHHHHH-HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH----SS-------T-SEEEEE
T ss_pred HHhcCccCchHHHHHHHHHHHHHH-HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh----Cc-------cccEEEec
Confidence 211100000000000112233333 2346778999999999999999999766555542 22 28888888
Q ss_pred ccccCC
Q 016010 262 NALIDG 267 (397)
Q Consensus 262 Ng~id~ 267 (397)
.|++.+
T Consensus 206 vP~l~d 211 (320)
T PF05448_consen 206 VPFLCD 211 (320)
T ss_dssp SESSSS
T ss_pred CCCccc
Confidence 887765
No 118
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=62.81 E-value=28 Score=33.20 Aligned_cols=87 Identities=14% Similarity=0.055 Sum_probs=54.1
Q ss_pred ceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCC
Q 016010 170 NVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTK 249 (397)
Q Consensus 170 nvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~ 249 (397)
+...|+-|.+.+.=-+-....+.. +-.+-++.+...+.++.. .++++.|+|.|-|+..+-...+++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~-Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~-- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDE-SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP-- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccch-HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--
Confidence 455677777543311111111221 334455566666666554 678899999999998888888877764321
Q ss_pred CceeeeeeeEeecccc
Q 016010 250 NTVINLKGIAIGNALI 265 (397)
Q Consensus 250 ~~~inLkGI~IGNg~i 265 (397)
..=+++-|++||+--
T Consensus 76 -~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 76 -PPDDLSFVLIGNPRR 90 (225)
T ss_pred -CcCceEEEEecCCCC
Confidence 124688999999843
No 119
>PRK14566 triosephosphate isomerase; Provisional
Probab=62.75 E-value=20 Score=35.15 Aligned_cols=61 Identities=21% Similarity=0.344 Sum_probs=45.7
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
.+.|.++..|+++++...-+.....+=|. |||..-|.-+..|+.. -+++|++||.+-+|+.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ--------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEechHhcCHH
Confidence 34578899999999975411112233343 9999999999999775 3599999999999874
No 120
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=62.66 E-value=22 Score=34.79 Aligned_cols=109 Identities=22% Similarity=0.279 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhH
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTA 200 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A 200 (397)
...+.+|+.+|= +.- .|.+.|+ ..+.+=.=..|+.=.| =-|.|.|-++.+. .+.....
T Consensus 58 ~~~~~lly~hGN---a~D-lgq~~~~-------------~~~l~~~ln~nv~~~D-YSGyG~S~G~psE----~n~y~Di 115 (258)
T KOG1552|consen 58 AAHPTLLYSHGN---AAD-LGQMVEL-------------FKELSIFLNCNVVSYD-YSGYGRSSGKPSE----RNLYADI 115 (258)
T ss_pred ccceEEEEcCCc---ccc-hHHHHHH-------------HHHHhhcccceEEEEe-cccccccCCCccc----ccchhhH
Confidence 346999999875 222 3444443 0111111245777788 5899999876543 2444555
Q ss_pred HHHHHHHHHHHHHCCCC-CCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcc
Q 016010 201 QDSYTFLVNWLERFPQY-KKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~-~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~ 269 (397)
+..|+.|++ +| +..+++++|.|-|..-.-.||.+ .+ +.|+++-+|+++-..
T Consensus 116 ~avye~Lr~------~~g~~~~Iil~G~SiGt~~tv~Lasr----------~~--~~alVL~SPf~S~~r 167 (258)
T KOG1552|consen 116 KAVYEWLRN------RYGSPERIILYGQSIGTVPTVDLASR----------YP--LAAVVLHSPFTSGMR 167 (258)
T ss_pred HHHHHHHHh------hcCCCceEEEEEecCCchhhhhHhhc----------CC--cceEEEeccchhhhh
Confidence 555666553 44 56789999999987442233321 12 999999999998643
No 121
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=61.94 E-value=18 Score=35.91 Aligned_cols=37 Identities=16% Similarity=0.340 Sum_probs=28.9
Q ss_pred hHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccc
Q 016010 196 DKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGH 232 (397)
Q Consensus 196 d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~ 232 (397)
-.++++.++..+.......|+=..=++|++|||-|..
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 3467788888888888888886544599999998653
No 122
>PRK14567 triosephosphate isomerase; Provisional
Probab=60.08 E-value=24 Score=34.37 Aligned_cols=61 Identities=21% Similarity=0.285 Sum_probs=45.5
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
.+.+.++..|+++++..+-+-....+=|. |||..-|.=+..|+.. -+++|++||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~--------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL--------PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC--------CCCCEEEeehhhhcHH
Confidence 35677889999999976522112233333 9999999999999875 3489999999999874
No 123
>COG0627 Predicted esterase [General function prediction only]
Probab=59.82 E-value=38 Score=33.99 Aligned_cols=129 Identities=21% Similarity=0.205 Sum_probs=66.8
Q ss_pred CCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCcc--ccC-CCCcccccceEEeeCCCCccccc-ccCCCCcccCChH
Q 016010 122 TNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTL--FRN-NYAWNNVANVVFLESPAGVGFSY-SSTKSDYELNGDK 197 (397)
Q Consensus 122 ~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l--~~N-~~sW~~~anvLfiDqP~GvGfSy-~~~~~~~~~~~d~ 197 (397)
.+.-|+|+.+|..|.-- .+.+.++.+=..+...+ .-+ -.-+...-++-=|+ |+|.|.|+ ++...... ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~--~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW--ASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc--ccC
Confidence 44445666667888742 23334444432222111 111 22244444555556 79999885 33332111 111
Q ss_pred HhHHHHHHHHH-----HHHHHCCCCCC-CCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 198 LTAQDSYTFLV-----NWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 198 ~~A~d~~~fL~-----~f~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
..+.+.||. .|.+.||--+. ..-.|+|+|-||+=+-.+|.+-.+ .++.++=-.|++++.
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd----------~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD----------RFKSASSFSGILSPS 190 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc----------hhceecccccccccc
Confidence 234444443 46667774442 256899999999977776654321 155555555666654
No 124
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=58.24 E-value=5.1 Score=36.44 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=46.9
Q ss_pred CCCCeEEEEcCCCChhHhhHHhhhhc----CCeEEcCCCCccccCCCC--cccccceEEeeCCCCccccc-ccC
Q 016010 121 STNPLLLWLNGGPGCSSLGYGAMSEL----GPFRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSY-SST 187 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcSS~~~g~~~E~----GP~~v~~~~~~l~~N~~s--W~~~anvLfiDqP~GvGfSy-~~~ 187 (397)
...+|=|-+.|| |||++.|++-.+. +-..+..+|-++...+.+ +-+-+-|=|+|...|.||-. .|+
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~~NP 148 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNP 148 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEecCC
Confidence 346799999998 9999876555433 225556666666666655 44556789999999999998 443
No 125
>KOG3101 consensus Esterase D [General function prediction only]
Probab=57.82 E-value=1.1e+02 Score=29.56 Aligned_cols=156 Identities=17% Similarity=0.180 Sum_probs=77.3
Q ss_pred ceeEEEEEEecCC----CCceEEEEEEecCCCC--CCCCeEEEEcCCCChhHhh------H-HhhhhcCCeEEcCCCC--
Q 016010 92 FDQYAGYVTVDPK----TGRSLFYYFAESPQNS--STNPLLLWLNGGPGCSSLG------Y-GAMSELGPFRVNKDGK-- 156 (397)
Q Consensus 92 ~~~ysGyl~v~~~----~~~~lFy~f~ea~~~~--~~~PlvlWLnGGPGcSS~~------~-g~~~E~GP~~v~~~~~-- 156 (397)
.+.+-|+.-|-.. .+-.|=|-.|-....+ +.-|+++||.| --|.--. + -.-.+.|=-.|.+|..
T Consensus 7 nk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSG-LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPR 85 (283)
T KOG3101|consen 7 NKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSG-LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPR 85 (283)
T ss_pred cccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecC-CcccchhhHhhhhHHHhHhhcCeEEECCCCCCC
Confidence 4555666555332 2334555544333333 34599999986 4553210 1 1223566666776642
Q ss_pred --ccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHH-HCCCCCCCCeEEEeccccccc
Q 016010 157 --TLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLE-RFPQYKKRDFYIAGESYAGHY 233 (397)
Q Consensus 157 --~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~-~fP~~~~~~~yi~GESYgG~y 233 (397)
.+.-.+.|| |=-.|.||= .+.+.+-.. ..-+.-+.+..-|-+-+. .+-.....+.-|+|+|.|||=
T Consensus 86 G~~v~g~~esw---------DFG~GAGFY-vnAt~epw~-~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhG 154 (283)
T KOG3101|consen 86 GVEVAGDDESW---------DFGQGAGFY-VNATQEPWA-KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHG 154 (283)
T ss_pred ccccCCCcccc---------cccCCceeE-EecccchHh-hhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCc
Confidence 222234466 434667763 333332111 112222233333333222 222333445899999999995
Q ss_pred chHHHHHHHHhccCCCCceeeeeeeEeeccccCCcc
Q 016010 234 VPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 234 vP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~ 269 (397)
+-.++.+ | .-..|+|.--.|..+|..
T Consensus 155 Al~~~Lk----n------~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 155 ALTIYLK----N------PSKYKSVSAFAPICNPIN 180 (283)
T ss_pred eEEEEEc----C------cccccceeccccccCccc
Confidence 4333321 1 124667777777777764
No 126
>COG4425 Predicted membrane protein [Function unknown]
Probab=57.15 E-value=20 Score=37.79 Aligned_cols=36 Identities=17% Similarity=0.388 Sum_probs=31.0
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccc
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGH 232 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~ 232 (397)
.++|+.+++..-.+...-|+=..-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 468999999999999999997766799999998753
No 127
>PLN02847 triacylglycerol lipase
Probab=56.87 E-value=20 Score=39.07 Aligned_cols=63 Identities=19% Similarity=0.303 Sum_probs=39.9
Q ss_pred ccCChHHhHHHHHHH----HHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeec
Q 016010 192 ELNGDKLTAQDSYTF----LVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGN 262 (397)
Q Consensus 192 ~~~~d~~~A~d~~~f----L~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGN 262 (397)
.+.+-...|+.++.. |++-+..+|.| ++.|+|||.||-.+.-++..+ ..++. .-+++.+..|-
T Consensus 222 AH~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilL-Re~~~----fssi~CyAFgP 288 (633)
T PLN02847 222 AHCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYIL-REQKE----FSSTTCVTFAP 288 (633)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHH-hcCCC----CCCceEEEecC
Confidence 344555666655554 44455667766 689999999999777776554 33322 34566777764
No 128
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=56.30 E-value=11 Score=35.35 Aligned_cols=57 Identities=26% Similarity=0.303 Sum_probs=41.2
Q ss_pred CCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHH
Q 016010 177 PAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTI 241 (397)
Q Consensus 177 P~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I 241 (397)
--|||-|.+.-... .++.+.|....+.|+ .++|+-+. +.++|-|+|+-.+-++|.+.
T Consensus 68 fRgVG~S~G~fD~G---iGE~~Da~aaldW~~---~~hp~s~~--~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 68 FRGVGRSQGEFDNG---IGELEDAAAALDWLQ---ARHPDSAS--CWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred ccccccccCcccCC---cchHHHHHHHHHHHH---hhCCCchh--hhhcccchHHHHHHHHHHhc
Confidence 57999997654433 267777777777666 57887654 79999999987777776654
No 129
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=53.94 E-value=18 Score=34.58 Aligned_cols=72 Identities=15% Similarity=0.107 Sum_probs=49.0
Q ss_pred CcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeee
Q 016010 179 GVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGI 258 (397)
Q Consensus 179 GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI 258 (397)
-|||-+++..- ..+++-.++.++++--|+.||.-+. +-+.|||-|.|.+.+.-.++ ++ -.+.|+
T Consensus 102 svgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~k~--l~~gGHSaGAHLa~qav~R~--r~-------prI~gl 165 (270)
T KOG4627|consen 102 SVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENTKV--LTFGGHSAGAHLAAQAVMRQ--RS-------PRIWGL 165 (270)
T ss_pred EeccCcCcccc-----cHHHHHHHHHHHHHHHHHhccccee--EEEcccchHHHHHHHHHHHh--cC-------chHHHH
Confidence 36666664332 5667888888888877888876543 89999999988666555552 22 236677
Q ss_pred EeeccccC
Q 016010 259 AIGNALID 266 (397)
Q Consensus 259 ~IGNg~id 266 (397)
++-.|+-+
T Consensus 166 ~l~~GvY~ 173 (270)
T KOG4627|consen 166 ILLCGVYD 173 (270)
T ss_pred HHHhhHhh
Confidence 77777654
No 130
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=52.79 E-value=1e+02 Score=32.89 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=23.1
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccchH
Q 016010 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQ 236 (397)
Q Consensus 204 ~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~ 236 (397)
++.+++..+.|-.= ..++=|+|||=|++-+-.
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~ 196 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILT 196 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHH
Confidence 56777778887443 336999999988875543
No 131
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=52.32 E-value=19 Score=34.33 Aligned_cols=39 Identities=18% Similarity=0.356 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHH
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~ 243 (397)
+....+|.+....+|+ +++|+|||=||..+-+.|..+.+
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 4556777777776544 59999999999888777776543
No 132
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=51.50 E-value=82 Score=27.44 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=44.4
Q ss_pred ccceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC
Q 016010 168 VANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 168 ~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
...++.+|. .|.|.+-. .. ...+..++.....+. ... ...+++++|+|.||..+-.+|..+.+..
T Consensus 25 ~~~v~~~~~-~g~~~~~~--~~----~~~~~~~~~~~~~l~---~~~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPL-PGFGPGEP--LP----ASADALVEAQAEAVL---RAA---GGRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecC-CCCCCCCC--CC----CCHHHHHHHHHHHHH---Hhc---CCCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 457888884 35554321 11 122333444333333 232 3468999999999999999998876542
Q ss_pred CCCceeeeeeeEeecc
Q 016010 248 TKNTVINLKGIAIGNA 263 (397)
Q Consensus 248 ~~~~~inLkGI~IGNg 263 (397)
..++++++.+.
T Consensus 90 -----~~~~~l~~~~~ 100 (212)
T smart00824 90 -----IPPAAVVLLDT 100 (212)
T ss_pred -----CCCcEEEEEcc
Confidence 23566655554
No 133
>PLN02324 triacylglycerol lipase
Probab=50.87 E-value=43 Score=35.01 Aligned_cols=70 Identities=16% Similarity=0.160 Sum_probs=48.0
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC-----CCCceeeeeeeEeeccccCC
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN-----TKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~-----~~~~~inLkGI~IGNg~id~ 267 (397)
..+.+++..-|+..++.+|... ..++|+|||-||-.+--.|..|.+.... .....+++.-+..|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 4566778888888888887642 3699999999999887777777664211 01124556666677776654
No 134
>PLN02802 triacylglycerol lipase
Probab=50.41 E-value=35 Score=36.54 Aligned_cols=65 Identities=8% Similarity=0.070 Sum_probs=45.0
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
.+.+++..-++.+++.+|... ..++|+|||-||-..--.|..|...... .+.+..+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCccc
Confidence 456677888888888776532 3699999999999888878777654321 2345566666665544
No 135
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=50.34 E-value=12 Score=30.49 Aligned_cols=58 Identities=17% Similarity=0.293 Sum_probs=35.5
Q ss_pred eEEEEcCCCChhHhhHHhhhhc---CCeEEcCCCCccccCCCCccccc--ceEEeeCCCCcccc
Q 016010 125 LLLWLNGGPGCSSLGYGAMSEL---GPFRVNKDGKTLFRNNYAWNNVA--NVVFLESPAGVGFS 183 (397)
Q Consensus 125 lvlWLnGGPGcSS~~~g~~~E~---GP~~v~~~~~~l~~N~~sW~~~a--nvLfiDqP~GvGfS 183 (397)
|=|.+.|| |||++.|++-.+. +-..+..+|-++.-.+.|-.... -|=|+|...|.||-
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF~ 90 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGFS 90 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcEE
Confidence 77888888 9999876554322 22334444555555555544443 36677777777764
No 136
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=50.10 E-value=52 Score=30.58 Aligned_cols=55 Identities=20% Similarity=0.159 Sum_probs=36.0
Q ss_pred HHHHHHHHHH-HCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 203 SYTFLVNWLE-RFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 203 ~~~fL~~f~~-~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+.+-|..|.+ +|+-...+ ..|+|.|.||.-+-.+|.+ +- =-+.+++..+|.+++.
T Consensus 98 l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~---~P-------d~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALR---HP-------DLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHH---ST-------TTESEEEEESEESETT
T ss_pred hhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHh---Cc-------cccccccccCcccccc
Confidence 3334444554 45544444 8999999999766666543 21 2388888888887775
No 137
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=49.09 E-value=72 Score=36.14 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=30.5
Q ss_pred ChHHhHHHHHHHHHHHHH----------HCCCCCCCCeEEEecccccccchHHHHH
Q 016010 195 GDKLTAQDSYTFLVNWLE----------RFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~----------~fP~~~~~~~yi~GESYgG~yvP~lA~~ 240 (397)
+-++...|+...... +. .+..+...++++.|||-||.....++..
T Consensus 521 n~rQ~v~Dll~L~~~-l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLS-LNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHH-HhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 445666666654433 32 2344667899999999999988887743
No 138
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=49.03 E-value=30 Score=36.27 Aligned_cols=62 Identities=27% Similarity=0.380 Sum_probs=37.1
Q ss_pred ccceEEee-------CCCCcccccccCC-CCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccc
Q 016010 168 VANVVFLE-------SPAGVGFSYSSTK-SDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHY 233 (397)
Q Consensus 168 ~anvLfiD-------qP~GvGfSy~~~~-~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~y 233 (397)
.|-|+|+| +|.|.- ||.+.. -.|- +.+++=.| +..|..++++-+.=+..++..+|-||||+-
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALAD-fA~ll~~lK~~~~a~~~pvIafGGSYGGML 180 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALAD-FAELLTFLKRDLSAEASPVIAFGGSYGGML 180 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHH-HHHHHHHHhhccccccCcEEEecCchhhHH
Confidence 57788888 455554 443211 1232 33444444 555666777754445668999999999953
No 139
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=48.92 E-value=2.6e+02 Score=28.56 Aligned_cols=123 Identities=22% Similarity=0.263 Sum_probs=65.2
Q ss_pred ceEEEEEEecCCCCCCCCeEEEEcCCCChhH--hhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCccccc
Q 016010 107 RSLFYYFAESPQNSSTNPLLLWLNGGPGCSS--LGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSY 184 (397)
Q Consensus 107 ~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS--~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy 184 (397)
--.+.|... . ....+|+||-++|=-|.|. ..-|++.+ +... -..++-++ -.|-|.+-
T Consensus 61 ~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~------------~~~r------g~~~Vv~~-~Rgcs~~~ 119 (345)
T COG0429 61 FIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMRA------------LSRR------GWLVVVFH-FRGCSGEA 119 (345)
T ss_pred EEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHHH------------HHhc------CCeEEEEe-cccccCCc
Confidence 345566432 2 2345599999999555552 21122221 1111 12344445 45666553
Q ss_pred ccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 185 SSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 185 ~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
.... .+.+.++. +|+..||..-.++| -.|++|.+|-|.||. +||.++.+.... .....++++-+|+
T Consensus 120 n~~p-~~yh~G~t---~D~~~~l~~l~~~~---~~r~~~avG~SLGgn---mLa~ylgeeg~d----~~~~aa~~vs~P~ 185 (345)
T COG0429 120 NTSP-RLYHSGET---EDIRFFLDWLKARF---PPRPLYAVGFSLGGN---MLANYLGEEGDD----LPLDAAVAVSAPF 185 (345)
T ss_pred ccCc-ceecccch---hHHHHHHHHHHHhC---CCCceEEEEecccHH---HHHHHHHhhccC----cccceeeeeeCHH
Confidence 2222 23233444 45444443323345 457999999999995 567777766432 2336667776665
No 140
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=48.89 E-value=38 Score=34.77 Aligned_cols=62 Identities=21% Similarity=0.302 Sum_probs=43.6
Q ss_pred CcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 190 DYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 190 ~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
.++. ++..+++...+|-.+=+ .|+..|+.|.|-|-||.-+...|.- .-++|++++ ++-.|+.
T Consensus 286 P~p~-n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvL-DAtFDDl 347 (517)
T KOG1553|consen 286 PYPV-NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVL-DATFDDL 347 (517)
T ss_pred CCcc-cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEe-ecchhhh
Confidence 3443 77777777777766544 5677899999999999888777752 456888865 4555543
No 141
>PRK04940 hypothetical protein; Provisional
Probab=48.85 E-value=18 Score=33.45 Aligned_cols=40 Identities=13% Similarity=0.193 Sum_probs=31.0
Q ss_pred CCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCccccc
Q 016010 220 RDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTRSM 272 (397)
Q Consensus 220 ~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~q~~ 272 (397)
+++.|+|.|-||.|+-.||.+- .+|.| +.||.+.|.....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~aV-LiNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQV-IFNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCEE-EECCCCChHHHHH
Confidence 4689999999999999998752 24444 7899999965433
No 142
>PLN02761 lipase class 3 family protein
Probab=48.59 E-value=46 Score=35.79 Aligned_cols=71 Identities=14% Similarity=0.115 Sum_probs=48.7
Q ss_pred HHhHHHHHHHHHHHHHHCCCC-CC--CCeEEEecccccccchHHHHHHHHhccC---CCCceeeeeeeEeeccccCC
Q 016010 197 KLTAQDSYTFLVNWLERFPQY-KK--RDFYIAGESYAGHYVPQLAYTILLNNKN---TKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~-~~--~~~yi~GESYgG~yvP~lA~~I~~~n~~---~~~~~inLkGI~IGNg~id~ 267 (397)
..+.+++...++...+.+|.. ++ ..++|+|||-||-..--.|..|...+-. .....+++.-+..|.|-+..
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 456778888999988888543 22 3599999999999888777777653311 01234566677777776654
No 143
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=48.56 E-value=6.2 Score=27.64 Aligned_cols=18 Identities=22% Similarity=0.163 Sum_probs=14.7
Q ss_pred hHHhhhCCcHHHHHHhCC
Q 016010 354 YYVEAYLNTREVQTVLHV 371 (397)
Q Consensus 354 ~~~~~YLN~pdVqkALhv 371 (397)
.-+-.-|++||||++|++
T Consensus 14 ~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 14 FGLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHHcCHHHHHHHHH
Confidence 345667999999999985
No 144
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=48.38 E-value=13 Score=34.86 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=28.6
Q ss_pred HHHHHHHCCCCCCCCeEEEecccccccchHHHHHH
Q 016010 207 LVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTI 241 (397)
Q Consensus 207 L~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I 241 (397)
-.+|+..+|+...+.+-|.|-|.||-.+-.+|.+.
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~ 43 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF 43 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC
Confidence 34688899999989999999999998888888765
No 145
>PLN02408 phospholipase A1
Probab=48.03 E-value=44 Score=34.37 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=45.0
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
...+++..-++..++.+|... ..++|+|||-||-..--.|..|...-.. ...++-+..|.|-+..
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVGN 243 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVGN 243 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCccc
Confidence 456677888888888888753 3599999999999887777777654211 1134556666666554
No 146
>PLN02561 triosephosphate isomerase
Probab=48.00 E-value=42 Score=32.67 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=44.6
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 198 LTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
+.++++..+++.++.+ |......++-|. |||-.-|.-+..|... .+++|++||.+.+|+
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 4577888899988854 432223344454 9999999999998764 459999999999996
No 147
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=46.66 E-value=1.3e+02 Score=33.55 Aligned_cols=126 Identities=21% Similarity=0.280 Sum_probs=65.6
Q ss_pred ceEEEEEEecCC--CC-CCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCccccc----------ceEE
Q 016010 107 RSLFYYFAESPQ--NS-STNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVA----------NVVF 173 (397)
Q Consensus 107 ~~lFy~f~ea~~--~~-~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~a----------nvLf 173 (397)
.-+.|-.+-... +| +.-|++|.+-||||.- ++.|.+.|.+.. =|++
T Consensus 623 g~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQ---------------------lVnnsfkgi~ylR~~~LaslGy~Vv~ 681 (867)
T KOG2281|consen 623 GLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQ---------------------LVNNSFKGIQYLRFCRLASLGYVVVF 681 (867)
T ss_pred CcEEEEEEEccccCCCCCCCceEEEEcCCCceE---------------------EeeccccceehhhhhhhhhcceEEEE
Confidence 445565554432 33 3479999999999862 444566665532 2588
Q ss_pred eeCCCCcc---cccccCCCCccc-CChHHhHHHHHHHHHHHHHHCCCCCCC-CeEEEecccccccchHHHHHHHHhccCC
Q 016010 174 LESPAGVG---FSYSSTKSDYEL-NGDKLTAQDSYTFLVNWLERFPQYKKR-DFYIAGESYAGHYVPQLAYTILLNNKNT 248 (397)
Q Consensus 174 iDqP~GvG---fSy~~~~~~~~~-~~d~~~A~d~~~fL~~f~~~fP~~~~~-~~yi~GESYgG~yvP~lA~~I~~~n~~~ 248 (397)
||. .|+- .-+- +-+.. .+.- .++|=+.-||-.-++. .|-+. .+-|-|-||||- |+...+.+..
T Consensus 682 IDn-RGS~hRGlkFE---~~ik~kmGqV-E~eDQVeglq~Laeq~-gfidmdrV~vhGWSYGGY----LSlm~L~~~P-- 749 (867)
T KOG2281|consen 682 IDN-RGSAHRGLKFE---SHIKKKMGQV-EVEDQVEGLQMLAEQT-GFIDMDRVGVHGWSYGGY----LSLMGLAQYP-- 749 (867)
T ss_pred EcC-CCccccchhhH---HHHhhccCee-eehhhHHHHHHHHHhc-CcccchheeEeccccccH----HHHHHhhcCc--
Confidence 994 3431 1110 00000 1111 1223233333322332 13222 489999999994 4444444322
Q ss_pred CCceeeeeeeEeeccccCCcc
Q 016010 249 KNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 249 ~~~~inLkGI~IGNg~id~~~ 269 (397)
. -+|--+-|.|++++..
T Consensus 750 ---~-IfrvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 750 ---N-IFRVAIAGAPVTDWRL 766 (867)
T ss_pred ---c-eeeEEeccCcceeeee
Confidence 1 2666677888888754
No 148
>PLN02429 triosephosphate isomerase
Probab=46.40 E-value=47 Score=33.42 Aligned_cols=60 Identities=20% Similarity=0.346 Sum_probs=44.7
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 198 LTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+.++.+..|+++|+.. +-+-...++-|. |||-.-|.-+..|... .+++|++||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 4577888999999864 322222344444 9999999999988764 4599999999999764
No 149
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=45.08 E-value=12 Score=34.90 Aligned_cols=16 Identities=31% Similarity=0.831 Sum_probs=14.0
Q ss_pred CCCCeEEEEcCCCChh
Q 016010 121 STNPLLLWLNGGPGCS 136 (397)
Q Consensus 121 ~~~PlvlWLnGGPGcS 136 (397)
.++|-|+|+=|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 4679999999999985
No 150
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=43.41 E-value=35 Score=33.92 Aligned_cols=53 Identities=11% Similarity=-0.032 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 203 ~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+-.++....++. ...++++.|+|+||..+-.++.. +. -.++++++.++.++..
T Consensus 122 ~~~~v~~l~~~~---~~~~i~lvGhS~GG~i~~~~~~~----~~------~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 122 IDKCVDYICRTS---KLDQISLLGICQGGTFSLCYAAL----YP------DKIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHh---CCCcccEEEECHHHHHHHHHHHh----Cc------hheeeEEEeccccccC
Confidence 444444433443 45689999999999866554432 11 1378888888777653
No 151
>PLN00413 triacylglycerol lipase
Probab=42.61 E-value=29 Score=36.81 Aligned_cols=39 Identities=15% Similarity=0.335 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHH
Q 016010 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (397)
Q Consensus 202 d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~ 243 (397)
++..-|++.++.+|++ +++|+|||-||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5566777778877755 69999999999988777766654
No 152
>PLN02934 triacylglycerol lipase
Probab=40.84 E-value=42 Score=35.99 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHh
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~ 244 (397)
..+..-|+++++.+|++ +++++|||-||-..--.|..+..+
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHh
Confidence 34667788888887775 699999999998877777665543
No 153
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=39.64 E-value=73 Score=29.30 Aligned_cols=66 Identities=20% Similarity=0.078 Sum_probs=39.0
Q ss_pred cccceEEeeCCCC--cccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHH
Q 016010 167 NVANVVFLESPAG--VGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYT 240 (397)
Q Consensus 167 ~~anvLfiDqP~G--vGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 240 (397)
++|-|.|++-.+. ...+- -... --+..|.++..|+...=..+ =..-.+-+.|||||...+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a--~~~~----~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDA--ASPG----YARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccc--cCch----HHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhh
Confidence 6888999854444 22221 1111 12356677777777755444 112258899999998766555544
No 154
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=39.47 E-value=67 Score=29.98 Aligned_cols=74 Identities=9% Similarity=0.087 Sum_probs=44.7
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCC--ceeeeee-eEeeccccCCcc
Q 016010 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKN--TVINLKG-IAIGNALIDGPT 269 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~--~~inLkG-I~IGNg~id~~~ 269 (397)
+-+..++.+...|.+..+..+.- .+++.+.|||-||-++=.....+.+.+..... ..+.+.. |-++.|...-..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~ 130 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRY 130 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCcc
Confidence 33456777777777777665443 46899999999999887666656554321110 1223333 235666665543
No 155
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=39.30 E-value=60 Score=32.75 Aligned_cols=60 Identities=18% Similarity=0.280 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 202 d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
.+.+-++.-.+++| +..++++|||-||..+...|..|...... ....++-+-.|-|-+.+
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCccc
Confidence 34444555556666 55899999999999999999999887542 23556666666665544
No 156
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=39.04 E-value=1.8e+02 Score=22.70 Aligned_cols=79 Identities=20% Similarity=0.208 Sum_probs=47.5
Q ss_pred CceEEEEEEecCCCCCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccc
Q 016010 106 GRSLFYYFAESPQNSSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (397)
Q Consensus 106 ~~~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~ 185 (397)
|..||+..++.++. .+.+|+.++|--..|.- |..+.+ + |.. +-.+|.-.| -.|-|.|-+
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~---~--------L~~------~G~~V~~~D-~rGhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE---F--------LAE------QGYAVFAYD-HRGHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH---H--------HHh------CCCEEEEEC-CCcCCCCCC
Confidence 34678877766433 78999999986444433 444442 1 111 235688899 589999964
Q ss_pred cCCCCcccCChHHhHHHHHHHHH
Q 016010 186 STKSDYELNGDKLTAQDSYTFLV 208 (397)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~ 208 (397)
... +. .+-+..-+|+..|++
T Consensus 60 ~rg--~~-~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 60 KRG--HI-DSFDDYVDDLHQFIQ 79 (79)
T ss_pred ccc--cc-CCHHHHHHHHHHHhC
Confidence 322 21 244566677666653
No 157
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=38.46 E-value=92 Score=30.06 Aligned_cols=59 Identities=22% Similarity=0.401 Sum_probs=44.0
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 198 LTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+.+.+...|+++++.. +.+ ....+-|. |||-.-|.=+..++... +++|++||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 4577888999999864 333 33344444 99999999888887642 489999999999753
No 158
>PLN02162 triacylglycerol lipase
Probab=37.79 E-value=45 Score=35.40 Aligned_cols=39 Identities=15% Similarity=0.266 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHH
Q 016010 202 DSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILL 243 (397)
Q Consensus 202 d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~ 243 (397)
.+..-|++.+.++|++ +++++|||-||-.+--.|..+..
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHH
Confidence 4455667777777654 69999999999877666665544
No 159
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=37.75 E-value=23 Score=30.39 Aligned_cols=63 Identities=22% Similarity=0.330 Sum_probs=38.1
Q ss_pred CeEEEEcCCCChhHhhHHhh--hhcCC--eEEcCCCCccccCCCC--cccccceEEeeCCCCcccccccC
Q 016010 124 PLLLWLNGGPGCSSLGYGAM--SELGP--FRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSYSST 187 (397)
Q Consensus 124 PlvlWLnGGPGcSS~~~g~~--~E~GP--~~v~~~~~~l~~N~~s--W~~~anvLfiDqP~GvGfSy~~~ 187 (397)
.|=|-+.|| |||++.|++- .|.+| ..+..+|-.+...+.+ +-+-+.|=|+|++.|.||-+.|+
T Consensus 40 ~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 40 GVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred eEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 456666654 8887665442 33333 2334444444444433 55567788999999999988654
No 160
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=37.62 E-value=2.2e+02 Score=27.91 Aligned_cols=40 Identities=13% Similarity=0.176 Sum_probs=26.9
Q ss_pred CeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 221 DFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 221 ~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
++.|+|||=||+-+-.++... .+ ....+++++++..+|+=
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~--~~---~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGN--AS---SSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhh--cc---cccccceeEEEEecccc
Confidence 499999999999443333221 11 12357899999988875
No 161
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=37.09 E-value=27 Score=29.15 Aligned_cols=64 Identities=19% Similarity=0.361 Sum_probs=38.4
Q ss_pred CeEEEEcCCCChhHhhHHhh--hhcCC--eEEcCCCCccccCCC--CcccccceEEeeCCCCcccccccCC
Q 016010 124 PLLLWLNGGPGCSSLGYGAM--SELGP--FRVNKDGKTLFRNNY--AWNNVANVVFLESPAGVGFSYSSTK 188 (397)
Q Consensus 124 PlvlWLnGGPGcSS~~~g~~--~E~GP--~~v~~~~~~l~~N~~--sW~~~anvLfiDqP~GvGfSy~~~~ 188 (397)
.|=|.+.+ .|||++.|.+- .|..+ ..+..++-++...+. .+-+-+-|=|+|.+.|.||...++.
T Consensus 25 ~LRi~v~~-~GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NPn 94 (107)
T PRK09502 25 GLRLGVRT-SGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPN 94 (107)
T ss_pred eEEEEEEC-CCcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECCC
Confidence 45555554 48887655442 33322 333444444444443 3566678999999999999986543
No 162
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=36.95 E-value=61 Score=31.05 Aligned_cols=91 Identities=18% Similarity=0.149 Sum_probs=54.7
Q ss_pred CeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccceEEeeCCCCcccccccCCCCcccCChHHhHHHH
Q 016010 124 PLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDS 203 (397)
Q Consensus 124 PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~ 203 (397)
--||.+-|--||+-.+|+.=.+ +- ++ - ....|+-+| |.|.|-|... ..++...-=.+.|++.
T Consensus 43 ~~iLlipGalGs~~tDf~pql~------~l-------~k--~-l~~TivawD-PpGYG~SrPP-~Rkf~~~ff~~Da~~a 104 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFPPQLL------SL-------FK--P-LQVTIVAWD-PPGYGTSRPP-ERKFEVQFFMKDAEYA 104 (277)
T ss_pred ceeEecccccccccccCCHHHH------hc-------CC--C-CceEEEEEC-CCCCCCCCCC-cccchHHHHHHhHHHH
Confidence 3477888988988776322221 11 11 0 126789999 9999999753 2233211112345555
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccchHHHH
Q 016010 204 YTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAY 239 (397)
Q Consensus 204 ~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 239 (397)
++.++. ++-.+|-|.|-|=||.-.-..|.
T Consensus 105 vdLM~a-------Lk~~~fsvlGWSdGgiTalivAa 133 (277)
T KOG2984|consen 105 VDLMEA-------LKLEPFSVLGWSDGGITALIVAA 133 (277)
T ss_pred HHHHHH-------hCCCCeeEeeecCCCeEEEEeec
Confidence 554442 34567999999999986655544
No 163
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=36.81 E-value=37 Score=35.38 Aligned_cols=36 Identities=36% Similarity=0.745 Sum_probs=27.4
Q ss_pred eeEEEEEEecCCCCceEEEEEEecCCCCCCCCeE-EEEcC
Q 016010 93 DQYAGYVTVDPKTGRSLFYYFAESPQNSSTNPLL-LWLNG 131 (397)
Q Consensus 93 ~~ysGyl~v~~~~~~~lFy~f~ea~~~~~~~Plv-lWLnG 131 (397)
..-.|||+++.+ |++.. +.|+.....+-||| +||.|
T Consensus 199 ~~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 199 TYKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 457999999975 67777 78886555666776 89987
No 164
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=36.65 E-value=74 Score=31.06 Aligned_cols=125 Identities=15% Similarity=0.091 Sum_probs=63.2
Q ss_pred cceEEeeCCCCcccccccCCCCcccCChHH-hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccC
Q 016010 169 ANVVFLESPAGVGFSYSSTKSDYELNGDKL-TAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKN 247 (397)
Q Consensus 169 anvLfiDqP~GvGfSy~~~~~~~~~~~d~~-~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~ 247 (397)
..||-.| =-|+|=|-....+.... .-.+ +-.|+-..| .++++ ....++.|..|||||||-.=-++..= ..+-.
T Consensus 58 f~Vlt~d-yRG~g~S~p~~~~~~~~-~~~DwA~~D~~aal-~~~~~--~~~~~P~y~vgHS~GGqa~gL~~~~~-k~~a~ 131 (281)
T COG4757 58 FEVLTFD-YRGIGQSRPASLSGSQW-RYLDWARLDFPAAL-AALKK--ALPGHPLYFVGHSFGGQALGLLGQHP-KYAAF 131 (281)
T ss_pred ceEEEEe-cccccCCCccccccCcc-chhhhhhcchHHHH-HHHHh--hCCCCceEEeeccccceeecccccCc-cccee
Confidence 4677777 57888886544332111 1111 223333333 33433 23567999999999999754443321 00000
Q ss_pred ---C--------CCceeeeeeeEeeccccCCcccccchhh-hhhhcc-CCChHhHhchhcccccc
Q 016010 248 ---T--------KNTVINLKGIAIGNALIDGPTRSMGVYE-NLWTHA-LNSDQTHKGIFTYCDFA 299 (397)
Q Consensus 248 ---~--------~~~~inLkGI~IGNg~id~~~q~~~~~~-f~~~~g-lIs~~~~~~i~~~C~~~ 299 (397)
+ -...-.|+-+.++|-..-+.+-..++.. -+...| -++-..+.+..+-|...
T Consensus 132 ~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p 196 (281)
T COG4757 132 AVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHP 196 (281)
T ss_pred eEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCc
Confidence 0 0112456666676666665554444221 122223 34445566677778764
No 165
>PTZ00333 triosephosphate isomerase; Provisional
Probab=36.23 E-value=87 Score=30.51 Aligned_cols=60 Identities=18% Similarity=0.307 Sum_probs=44.4
Q ss_pred HHhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
.+.++++..++++++.. |-.......-|. |||-.-|.-+..+... .+++|++||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 35677888999998853 433223344444 9999999999998764 459999999999984
No 166
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=35.89 E-value=30 Score=32.31 Aligned_cols=64 Identities=13% Similarity=0.291 Sum_probs=40.2
Q ss_pred eEEEEcCCCChhHhhHHhhh----hc--CCeEEcCCCCccccCCCC--cccccceEEeeCCCCcccccccCCC
Q 016010 125 LLLWLNGGPGCSSLGYGAMS----EL--GPFRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSYSSTKS 189 (397)
Q Consensus 125 lvlWLnGGPGcSS~~~g~~~----E~--GP~~v~~~~~~l~~N~~s--W~~~anvLfiDqP~GvGfSy~~~~~ 189 (397)
|=|.+.| +|||++.|++-. |. +-..+..+|-++...+.| +-+-+-|=|+|...|.||.+.|+..
T Consensus 25 LRI~V~~-gGCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPNa 96 (192)
T PRK11190 25 IRVFVIN-PGTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPNA 96 (192)
T ss_pred EEEEEEC-CCcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCCC
Confidence 4444455 488876554333 11 224444555566666655 5556778999999999999976543
No 167
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=35.45 E-value=1.4e+02 Score=32.05 Aligned_cols=65 Identities=22% Similarity=0.206 Sum_probs=40.9
Q ss_pred cceEEeeCCCCcccccccC---CCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccc
Q 016010 169 ANVVFLESPAGVGFSYSST---KSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYV 234 (397)
Q Consensus 169 anvLfiDqP~GvGfSy~~~---~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yv 234 (397)
|.|+.||... .|-|.... +.+..--+.+++-.|+..|++.-=.+|+.-.+.+++.+|-||.|...
T Consensus 119 A~v~~lEHRF-YG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLs 186 (514)
T KOG2182|consen 119 ATVFQLEHRF-YGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLS 186 (514)
T ss_pred CeeEEeeeec-cccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHH
Confidence 6688888533 34332111 01111125566777888898887778876555589999999999543
No 168
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=35.17 E-value=1.2e+02 Score=29.54 Aligned_cols=59 Identities=20% Similarity=0.319 Sum_probs=44.2
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 198 LTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+.++++..|+++++.. |. -...++-|. |||-.-|.=+..+... .+++|++||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 4677888999998863 32 122334444 9999999999998764 4599999999999764
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.03 E-value=55 Score=33.63 Aligned_cols=119 Identities=19% Similarity=0.271 Sum_probs=71.5
Q ss_pred CCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEc----CCCCccccCCCCcccccceEEeeCCCCcccccccCCC--Cccc
Q 016010 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVN----KDGKTLFRNNYAWNNVANVVFLESPAGVGFSYSSTKS--DYEL 193 (397)
Q Consensus 120 ~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~----~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~~~~~--~~~~ 193 (397)
...+-++++++| |.+-.|=+++|.. ..+.. -+-++||+....+ +|
T Consensus 113 s~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~-------------------~~pVvFSWPS~g~l~~Y-- 163 (377)
T COG4782 113 SSAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGND-------------------GVPVVFSWPSRGSLLGY-- 163 (377)
T ss_pred cCCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCC-------------------cceEEEEcCCCCeeeec--
Confidence 367899999998 7777777777631 12211 2334455433222 23
Q ss_pred CChHHhHHHHHHHHHHHHHHCCC-CCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCcc
Q 016010 194 NGDKLTAQDSYTFLVNWLERFPQ-YKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPT 269 (397)
Q Consensus 194 ~~d~~~A~d~~~fL~~f~~~fP~-~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~ 269 (397)
+-|++.++.....|+..++.--+ -.-+++||..||-|.--+-..-.++.-++.+ .....++=|++-.|-+|-+.
T Consensus 164 n~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~--~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 164 NYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADR--PLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCc--chhhhhhheEeeCCCCChhh
Confidence 24444454555555555533211 1245799999999887666666666555432 14567888999999988764
No 170
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=34.95 E-value=89 Score=31.18 Aligned_cols=103 Identities=21% Similarity=0.274 Sum_probs=61.7
Q ss_pred CCCCCeEEEEcCCCChhHhhHHhhhhcCCeEEcCCCCccccCCCCcccccce--EEeeCCCCcccccccCCCCcccCChH
Q 016010 120 SSTNPLLLWLNGGPGCSSLGYGAMSELGPFRVNKDGKTLFRNNYAWNNVANV--VFLESPAGVGFSYSSTKSDYELNGDK 197 (397)
Q Consensus 120 ~~~~PlvlWLnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anv--LfiDqP~GvGfSy~~~~~~~~~~~d~ 197 (397)
.+...+|+=++|-||.-== |--+= ++-..+++ +=|.- .|-||+- ...+..
T Consensus 32 gs~~gTVv~~hGsPGSH~D----FkYi~----------------~~l~~~~iR~I~iN~-PGf~~t~--~~~~~~----- 83 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHND----FKYIR----------------PPLDEAGIRFIGINY-PGFGFTP--GYPDQQ----- 83 (297)
T ss_pred CCCceeEEEecCCCCCccc----hhhhh----------------hHHHHcCeEEEEeCC-CCCCCCC--CCcccc-----
Confidence 3455689999999998421 11110 12233443 33442 3555553 222222
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccc
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNAL 264 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~ 264 (397)
-+...-..|+.++++.- +.+ ..+.+.|||-|+--+-++|... ++.|+++.||.
T Consensus 84 ~~n~er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~ 136 (297)
T PF06342_consen 84 YTNEERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPP 136 (297)
T ss_pred cChHHHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC------------ccceEEEecCC
Confidence 23334456777777764 444 4688899999998888777643 37899999986
No 171
>PLN02310 triacylglycerol lipase
Probab=34.88 E-value=81 Score=32.92 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=41.7
Q ss_pred HhHHHHHHHHHHHHHHCCC-CCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 198 LTAQDSYTFLVNWLERFPQ-YKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~-~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
.+.+++..-++...+.+++ -....+.|+|||-||-.+--.|..|.... ..+++.-+..|.|-+..
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVGN 251 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCccc
Confidence 3455666677776666653 12346999999999988776666665432 23455666667766653
No 172
>PLN03037 lipase class 3 family protein; Provisional
Probab=34.46 E-value=87 Score=33.73 Aligned_cols=65 Identities=15% Similarity=0.203 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 199 TAQDSYTFLVNWLERFPQY-KKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 199 ~A~d~~~fL~~f~~~fP~~-~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
+.+++..-++...+.+|+. ....++|+|||-||-.+--.|..|...... ..++.-+..|.|-+..
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVGN 361 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVGN 361 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCccC
Confidence 3456677777777777653 234699999999999887777666654321 1134445555554443
No 173
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=33.06 E-value=34 Score=30.99 Aligned_cols=39 Identities=5% Similarity=-0.078 Sum_probs=27.4
Q ss_pred CCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccC
Q 016010 219 KRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALID 266 (397)
Q Consensus 219 ~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id 266 (397)
..+.+|+|||.|+.-+-..+. .+ ...+++|+++..|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~-------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQ-------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HT-------CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hc-------ccccccEEEEEcCCCc
Confidence 557999999999876555554 22 2457999999999954
No 174
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=32.11 E-value=36 Score=34.98 Aligned_cols=38 Identities=5% Similarity=0.043 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHH
Q 016010 201 QDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTIL 242 (397)
Q Consensus 201 ~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~ 242 (397)
..+-..+++-++. .++++.|.|||.||.++-.+-....
T Consensus 104 ~~lk~~ie~~~~~----~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 104 TKLKQLIEEAYKK----NGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHh----cCCcEEEEEeCCCchHHHHHHHhcc
Confidence 3444444443333 3789999999999988877666553
No 175
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=31.67 E-value=46 Score=31.12 Aligned_cols=24 Identities=25% Similarity=0.695 Sum_probs=17.8
Q ss_pred CCCCCeEEEEcC--CCChhHhhHHhhh
Q 016010 120 SSTNPLLLWLNG--GPGCSSLGYGAMS 144 (397)
Q Consensus 120 ~~~~PlvlWLnG--GPGcSS~~~g~~~ 144 (397)
...+|.+|||.| |-|-|.++ .++.
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA-~ale 44 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIA-NALE 44 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHH-HHHH
Confidence 356799999999 66777774 5544
No 176
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=31.59 E-value=55 Score=29.80 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=51.3
Q ss_pred ceEEeeCCCCccc-ccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCC
Q 016010 170 NVVFLESPAGVGF-SYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNT 248 (397)
Q Consensus 170 nvLfiDqP~GvGf-Sy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 248 (397)
++--|+-|+..+. +|. .+....++++...++++..+-|. .++.|.|-|-|++.+-..+.. ....
T Consensus 41 ~~~~V~YpA~~~~~~y~--------~S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~----~~l~ 105 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYG--------DSVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSG----DGLP 105 (179)
T ss_dssp EEEE--S---SCGGSCH--------HHHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHH----TTSS
T ss_pred EEEecCCCCCCCccccc--------ccHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHh----ccCC
Confidence 3444677877766 332 14456677888889999999885 479999999999877666555 1111
Q ss_pred CCceeeeee-eEeeccccCCcc
Q 016010 249 KNTVINLKG-IAIGNALIDGPT 269 (397)
Q Consensus 249 ~~~~inLkG-I~IGNg~id~~~ 269 (397)
....=++.+ +.+|||.-.+..
T Consensus 106 ~~~~~~I~avvlfGdP~~~~~~ 127 (179)
T PF01083_consen 106 PDVADRIAAVVLFGDPRRGAGQ 127 (179)
T ss_dssp HHHHHHEEEEEEES-TTTBTTT
T ss_pred hhhhhhEEEEEEecCCcccCCc
Confidence 112234666 578998875443
No 177
>COG5510 Predicted small secreted protein [Function unknown]
Probab=30.92 E-value=65 Score=22.93 Aligned_cols=13 Identities=46% Similarity=0.690 Sum_probs=9.0
Q ss_pred ChhHHHHHHHHHH
Q 016010 1 MKKIIALFSWLLI 13 (397)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (397)
|||+|++.+++|+
T Consensus 2 mk~t~l~i~~vll 14 (44)
T COG5510 2 MKKTILLIALVLL 14 (44)
T ss_pred chHHHHHHHHHHH
Confidence 7887776666644
No 178
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=30.84 E-value=2.4e+02 Score=30.44 Aligned_cols=85 Identities=11% Similarity=0.002 Sum_probs=49.4
Q ss_pred cceEEeeCCCCcccccccCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCC
Q 016010 169 ANVVFLESPAGVGFSYSSTKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNT 248 (397)
Q Consensus 169 anvLfiDqP~GvGfSy~~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~ 248 (397)
..|+-|| -.|-|.|....+ -++-+.+.+..++....+. ....+++++|+|-||..+...+........
T Consensus 221 f~V~~iD-wrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVIS-WRNPDASQADKT------FDDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEE-CCCCCcccccCC------hhhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 4577777 456676633211 1122333455555555443 356789999999999987653332222210
Q ss_pred CCceeeeeeeEeeccccCCc
Q 016010 249 KNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 249 ~~~~inLkGI~IGNg~id~~ 268 (397)
.-.++++++.+..+|..
T Consensus 289 ---~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 ---DKRIKSATFFTTLLDFS 305 (532)
T ss_pred ---CCccceEEEEecCcCCC
Confidence 12378888888878764
No 179
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=30.60 E-value=40 Score=31.04 Aligned_cols=28 Identities=36% Similarity=0.586 Sum_probs=21.1
Q ss_pred CCCeEEEEcCCC--ChhHhhHHhhhhc--CCeE
Q 016010 122 TNPLLLWLNGGP--GCSSLGYGAMSEL--GPFR 150 (397)
Q Consensus 122 ~~PlvlWLnGGP--GcSS~~~g~~~E~--GP~~ 150 (397)
.+--++.||||| |-||+. -+|+|+ |||.
T Consensus 21 ~~griVlLNG~~saGKSSiA-~A~Q~~~a~pwm 52 (205)
T COG3896 21 PEGRIVLLNGGSSAGKSSIA-LAFQDLAAEPWM 52 (205)
T ss_pred CCceEEEecCCCccchhHHH-HHHHHHhhcchh
Confidence 344578899998 678995 899987 6654
No 180
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=30.21 E-value=63 Score=23.52 Aligned_cols=11 Identities=36% Similarity=0.283 Sum_probs=7.3
Q ss_pred ChhHHHHHHHH
Q 016010 1 MKKIIALFSWL 11 (397)
Q Consensus 1 ~~~~~~~~~~~ 11 (397)
|||+|++...+
T Consensus 2 mKk~i~~i~~~ 12 (48)
T PRK10081 2 VKKTIAAIFSV 12 (48)
T ss_pred hHHHHHHHHHH
Confidence 78888864333
No 181
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=29.97 E-value=1.4e+02 Score=29.36 Aligned_cols=65 Identities=18% Similarity=0.074 Sum_probs=40.9
Q ss_pred HhHHHHHHHHHHHHHHCCC--C-CCCCeEEEecccccccchHHHHHHHHhccCCCCceee--eeeeEeeccccCC
Q 016010 198 LTAQDSYTFLVNWLERFPQ--Y-KKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVIN--LKGIAIGNALIDG 267 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~--~-~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~in--LkGI~IGNg~id~ 267 (397)
..|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|..+... - .+.++ |.|.+.|.+..|.
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~-Y---ApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS-Y---APELNRDLVGAAAGGPPADL 115 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH-h---CcccccceeEEeccCCccCH
Confidence 4455556666554443332 2 35689999999998754 333333221 1 24688 9999999987775
No 182
>TIGR02011 IscA iron-sulfur cluster assembly protein IscA. This clade is limited to the proteobacteria.
Probab=29.19 E-value=34 Score=28.34 Aligned_cols=64 Identities=19% Similarity=0.356 Sum_probs=39.1
Q ss_pred CCeEEEEcCCCChhHhhHHhh--hhcCC--eEEcCCCCccccCCCC--cccccceEEeeCCCCcccccccC
Q 016010 123 NPLLLWLNGGPGCSSLGYGAM--SELGP--FRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSYSST 187 (397)
Q Consensus 123 ~PlvlWLnGGPGcSS~~~g~~--~E~GP--~~v~~~~~~l~~N~~s--W~~~anvLfiDqP~GvGfSy~~~ 187 (397)
.+|=|.+.+| |||++.|++- .|..+ ..+..+|-++...+.+ +-+-+-|=|+|.+.|.||...++
T Consensus 22 ~~lRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~nP 91 (105)
T TIGR02011 22 FGLRLGVKTS-GCSGMAYVLEFVDEPTPDDIVFEDKGVKIVIDGKSLQYLDGTQLDFVKEGLNEGFKFTNP 91 (105)
T ss_pred ceEEEEEeCC-CCCCEEEEeeecCCCCCCCEEEEcCCEEEEEcHHHhHHhCCCEEEEecCCCcceEEEECC
Confidence 3566666665 8887545543 34333 2334444444444433 55566788999999999987553
No 183
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=28.98 E-value=59 Score=34.45 Aligned_cols=59 Identities=20% Similarity=0.231 Sum_probs=45.2
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCccc
Q 016010 198 LTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTR 270 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~q 270 (397)
.++.---..++.||.+-|+| -|..|-|=||+=.-..|++--+ .++||+.|.|.++....
T Consensus 97 ~~~~~aK~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~----------dfDGIlAgaPA~~~~~~ 155 (474)
T PF07519_consen 97 ETTVVAKALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPE----------DFDGILAGAPAINWTHL 155 (474)
T ss_pred HHHHHHHHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChh----------hcCeEEeCCchHHHHHH
Confidence 33434445677888886665 6999999999988888876544 39999999999987543
No 184
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=28.87 E-value=1.3e+02 Score=28.49 Aligned_cols=47 Identities=21% Similarity=0.175 Sum_probs=32.4
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCC-CCeEEEecccccccchHHHHHHHHh
Q 016010 195 GDKLTAQDSYTFLVNWLERFPQYKK-RDFYIAGESYAGHYVPQLAYTILLN 244 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~I~~~ 244 (397)
.|..+++-+...+.+.+..-++-.. +.+.-+| ||||.|.+...+++.
T Consensus 105 ~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 105 NDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp T-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 7788888888888888887544321 3455566 899999999998875
No 185
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=27.65 E-value=27 Score=24.53 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=24.7
Q ss_pred ccccCCcccccchhhhhhhccCCChHhHhchh
Q 016010 262 NALIDGPTRSMGVYENLWTHALNSDQTHKGIF 293 (397)
Q Consensus 262 Ng~id~~~q~~~~~~f~~~~glIs~~~~~~i~ 293 (397)
.|.+||.+...--.+=+...|+|+.+++..+.
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~ 42 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLL 42 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHH
Confidence 37788888766667889999999999887664
No 186
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=27.25 E-value=1.3e+02 Score=30.15 Aligned_cols=70 Identities=10% Similarity=0.091 Sum_probs=38.2
Q ss_pred ChHHhHHHHHHHHHHHHHHC-CC-CCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCccc
Q 016010 195 GDKLTAQDSYTFLVNWLERF-PQ-YKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGPTR 270 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~f-P~-~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~~q 270 (397)
+-++.++|+-..+. +++.. .. +..+++.|.|||=|..=|-+... ..+.. ...-.++|+++-.|+-|....
T Consensus 82 SL~~D~~eI~~~v~-ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~---~~~~~--~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVE-YLRSEKGGHFGREKIVLMGHSTGCQDVLHYLS---SPNPS--PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHH-HHHHHS------S-EEEEEECCHHHHHHHHHH---H-TT-----CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHH-HHHHhhccccCCccEEEEecCCCcHHHHHHHh---ccCcc--ccccceEEEEEeCCCCChhHh
Confidence 55566777665444 44442 22 45668999999999875544443 33321 124679999999999887653
No 187
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=26.54 E-value=64 Score=32.86 Aligned_cols=68 Identities=25% Similarity=0.350 Sum_probs=42.6
Q ss_pred ccceEEeeCCCCcc-ccccc----------CCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchH
Q 016010 168 VANVVFLESPAGVG-FSYSS----------TKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQ 236 (397)
Q Consensus 168 ~anvLfiDqP~GvG-fSy~~----------~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~ 236 (397)
..-|+|-|+-+||| |--.- ..+-+. .+..+-.+..|.||...|+ -+..+|++|-|=|..-+=.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg-~gL~~nI~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFG-QGLVQNIREAYRFLIFNYE-----PGDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHH-HHHHHHHHHHHHHHHHhcC-----CCCeEEEeeccchhHHHHH
Confidence 55689999988886 32110 011122 1445566778899987765 2557999999987655544
Q ss_pred HHHHH
Q 016010 237 LAYTI 241 (397)
Q Consensus 237 lA~~I 241 (397)
||-.|
T Consensus 139 lagmi 143 (423)
T COG3673 139 LAGMI 143 (423)
T ss_pred HHHHH
Confidence 54443
No 188
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=26.40 E-value=1.3e+02 Score=33.40 Aligned_cols=61 Identities=18% Similarity=0.276 Sum_probs=45.3
Q ss_pred HHhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
.+.+.++..|+++|+.. |-+-....+=|. |||-.-|.-+..|+.. -+++|+.||.+.+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ--------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEeehHhcCHH
Confidence 35678889999999963 322212233333 9999999999999775 3599999999998874
No 189
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=26.35 E-value=5.2e+02 Score=25.44 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=21.9
Q ss_pred HHHHHHHHHH----HHHH-CCCCCCCCeEEEecccccccch
Q 016010 200 AQDSYTFLVN----WLER-FPQYKKRDFYIAGESYAGHYVP 235 (397)
Q Consensus 200 A~d~~~fL~~----f~~~-fP~~~~~~~yi~GESYgG~yvP 235 (397)
|+.+.+||.+ |.+. .+- +..+--|+||||||-.|-
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~-~~~~~~i~GhSlGGLfvl 152 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRT-NSERTAIIGHSLGGLFVL 152 (264)
T ss_pred hHHHHHHHHHhhHHHHhccccc-CcccceeeeecchhHHHH
Confidence 4555666655 4444 222 233489999999998764
No 190
>PRK06762 hypothetical protein; Provisional
Probab=26.34 E-value=39 Score=29.62 Aligned_cols=13 Identities=23% Similarity=0.549 Sum_probs=11.7
Q ss_pred CeEEEEcCCCChh
Q 016010 124 PLLLWLNGGPGCS 136 (397)
Q Consensus 124 PlvlWLnGGPGcS 136 (397)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999886
No 191
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=26.02 E-value=53 Score=26.93 Aligned_cols=27 Identities=33% Similarity=0.551 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccc
Q 016010 202 DSYTFLVNWLERFPQYKKRDFYIAGESYA 230 (397)
Q Consensus 202 d~~~fL~~f~~~fP~~~~~~~yi~GESYg 230 (397)
|+|++.+.|+-+ .|-.+.|.+.|+||+
T Consensus 8 dIYDAvRaflLr--~Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 8 DIYDAVRAFLLR--HYYDKRFIVYGRSNA 34 (100)
T ss_pred hHHHHHHHHHHH--HHccceEEEecchHH
Confidence 678888888887 477778999999993
No 192
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=25.52 E-value=4.5e+02 Score=28.29 Aligned_cols=115 Identities=19% Similarity=0.358 Sum_probs=68.5
Q ss_pred eEEEEEEecCCCCCCCCeEEEEcCCCChhHh-hHHhhhhcC-CeEEcCCCCccccCCCCcccccceEEeeCCCCcccccc
Q 016010 108 SLFYYFAESPQNSSTNPLLLWLNGGPGCSSL-GYGAMSELG-PFRVNKDGKTLFRNNYAWNNVANVVFLESPAGVGFSYS 185 (397)
Q Consensus 108 ~lFy~f~ea~~~~~~~PlvlWLnGGPGcSS~-~~g~~~E~G-P~~v~~~~~~l~~N~~sW~~~anvLfiDqP~GvGfSy~ 185 (397)
.++|+|-+.. -.-||.+++.|==..-+. ||++|-.+| || |||=|..+--| ++=
T Consensus 277 Ei~yYFnPGD---~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~Pf---------------------LL~~DpRleGG-aFY 331 (511)
T TIGR03712 277 EFIYYFNPGD---FKPPLNVYFSGYRPAEGFEGYFMMKRLGAPF---------------------LLIGDPRLEGG-AFY 331 (511)
T ss_pred eeEEecCCcC---CCCCeEEeeccCcccCcchhHHHHHhcCCCe---------------------EEeeccccccc-eee
Confidence 4777776652 244999999994444433 244555553 55 45556444334 321
Q ss_pred cCCCCcccCChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeecccc
Q 016010 186 STKSDYELNGDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALI 265 (397)
Q Consensus 186 ~~~~~~~~~~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~i 265 (397)
. +.++--..+...+++-++.- .|+.+++.+.|=|-|--=+-+.+ ..++=++|+||=|++
T Consensus 332 l--------Gs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYg------------a~l~P~AIiVgKPL~ 390 (511)
T TIGR03712 332 L--------GSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYG------------AKLSPHAIIVGKPLV 390 (511)
T ss_pred e--------CcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhc------------ccCCCceEEEcCccc
Confidence 1 22223345556666666543 67888999999998753222222 256778899999988
Q ss_pred CCc
Q 016010 266 DGP 268 (397)
Q Consensus 266 d~~ 268 (397)
+-.
T Consensus 391 NLG 393 (511)
T TIGR03712 391 NLG 393 (511)
T ss_pred chh
Confidence 753
No 193
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=25.51 E-value=39 Score=32.61 Aligned_cols=61 Identities=20% Similarity=0.346 Sum_probs=42.5
Q ss_pred HHhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 197 KLTAQDSYTFLVNWLER-FPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
.+.++.+..++++++.. |-+-..+++-|. |||..-|.=+..+... .+++|+.||.+.+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ--------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS--------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC--------CCCCEEEEchhhhccc
Confidence 35677889999998753 211122233343 8999999988888764 4699999999999875
No 194
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=24.79 E-value=58 Score=28.47 Aligned_cols=17 Identities=29% Similarity=0.557 Sum_probs=14.9
Q ss_pred CCCCCeEEEEcCCCChh
Q 016010 120 SSTNPLLLWLNGGPGCS 136 (397)
Q Consensus 120 ~~~~PlvlWLnGGPGcS 136 (397)
..++||||=|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 46789999999999985
No 195
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=24.10 E-value=50 Score=33.91 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=22.1
Q ss_pred CeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 221 DFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 221 ~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
.+.++||||||--+-+.+.. . ..+|..++-+||+-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~---d--------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQ---D--------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH------------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHhh---c--------cCcceEEEeCCcccCC
Confidence 58999999999655543332 1 2377888889988774
No 196
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=22.65 E-value=3.2e+02 Score=28.83 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccchHHH
Q 016010 203 SYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLA 238 (397)
Q Consensus 203 ~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA 238 (397)
.++++++....|-. ..+.+-|+|||.||..|-.+.
T Consensus 179 AL~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 179 ALRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 36677777777742 344699999999998875443
No 197
>PRK03995 hypothetical protein; Provisional
Probab=22.23 E-value=1.5e+02 Score=29.08 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=31.2
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHh
Q 016010 195 GDKLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLN 244 (397)
Q Consensus 195 ~d~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~ 244 (397)
.|..+++-+...+...++.-+.=..+.+.-+| ||||.|.+...+++.
T Consensus 157 ~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 157 KNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred CCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 56667777777777776532111233444566 899999999988764
No 198
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=21.96 E-value=65 Score=29.44 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=27.1
Q ss_pred HHHHHHHHHCCCCCCCCeEEEecccccccchHHHH
Q 016010 205 TFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAY 239 (397)
Q Consensus 205 ~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 239 (397)
....+|++..|+....++.++|-|+||+++-.+|.
T Consensus 83 ~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 83 QAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HHHHHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 34566777777667778999999999988766654
No 199
>PRK14565 triosephosphate isomerase; Provisional
Probab=21.95 E-value=1.6e+02 Score=28.49 Aligned_cols=53 Identities=15% Similarity=0.219 Sum_probs=40.1
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 197 KLTAQDSYTFLVNWLERFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 197 ~~~A~d~~~fL~~f~~~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
.+.+++...+++++. .+.-|. |||..-|.-+..+... -+++|++||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHH
Confidence 345777888888762 133333 9999999999998763 3599999999999865
No 200
>PF13974 YebO: YebO-like protein
Probab=21.94 E-value=1.7e+02 Score=23.63 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHH
Q 016010 4 IIALFSWLLISTCFLTLLTEFAESNHQADNLYRLI 38 (397)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (397)
+++++++++|+|+-= ++.+++.|-+-|.++.
T Consensus 6 ~~~lv~livWFFVnR----aSvRANEQI~LL~~il 36 (80)
T PF13974_consen 6 LVLLVGLIVWFFVNR----ASVRANEQIELLEEIL 36 (80)
T ss_pred HHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHH
Confidence 456677777766654 4456677766666664
No 201
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=21.93 E-value=1.1e+02 Score=28.35 Aligned_cols=64 Identities=11% Similarity=0.241 Sum_probs=41.1
Q ss_pred CeEEEEcCCCChhHhhHHhh----hhc--CCeEEcCCCCccccCCCC--cccccceEEeeCCCCcccccccCC
Q 016010 124 PLLLWLNGGPGCSSLGYGAM----SEL--GPFRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSYSSTK 188 (397)
Q Consensus 124 PlvlWLnGGPGcSS~~~g~~----~E~--GP~~v~~~~~~l~~N~~s--W~~~anvLfiDqP~GvGfSy~~~~ 188 (397)
.|=|.+.| .|||++.|++- .|. +=..+..+|-++...+.| +-+-+-|=|+|...|.||.+.+..
T Consensus 23 ~LRv~V~~-gGCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVN-PGTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEEC-CccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 35566665 48887655542 222 224444455555555544 666778999999999999997654
No 202
>PRK15492 triosephosphate isomerase; Provisional
Probab=21.76 E-value=2.2e+02 Score=27.81 Aligned_cols=59 Identities=19% Similarity=0.225 Sum_probs=44.4
Q ss_pred HhHHHHHHHHHHHHH-HCCCCCCCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCCc
Q 016010 198 LTAQDSYTFLVNWLE-RFPQYKKRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDGP 268 (397)
Q Consensus 198 ~~A~d~~~fL~~f~~-~fP~~~~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~~ 268 (397)
+.+.+...++++++. .+-+- ..++-|. |||-.-|.-+..|+.. -+++|++||...+|+.
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~--------~diDG~LvG~aSl~~~ 248 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ--------PHIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC--------CCCCEEEeehhhcCHH
Confidence 456778889999874 34222 2344554 9999999999999764 3599999999999875
No 203
>PRK07868 acyl-CoA synthetase; Validated
Probab=21.28 E-value=2.7e+02 Score=32.19 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=27.6
Q ss_pred CCCeEEEecccccccchHHHHHHHHhccCCCCceeeeeeeEeeccccCC
Q 016010 219 KRDFYIAGESYAGHYVPQLAYTILLNNKNTKNTVINLKGIAIGNALIDG 267 (397)
Q Consensus 219 ~~~~yi~GESYgG~yvP~lA~~I~~~n~~~~~~~inLkGI~IGNg~id~ 267 (397)
..+++++|+|.||..+-.+|.. ... -.++++++.+.-+|.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~--~~~-------~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAY--RRS-------KDIASIVTFGSPVDT 179 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHh--cCC-------CccceEEEEeccccc
Confidence 4579999999999988777653 111 136777776666553
No 204
>TIGR01997 sufA_proteo FeS assembly scaffold SufA. This model represents the SufA protein of the SUF system of iron-sulfur cluster biosynthesis. This system performs FeS biosynthesis even during oxidative stress and tends to be absent in obligate anaerobic and microaerophilic bacteria.
Probab=21.25 E-value=76 Score=26.35 Aligned_cols=62 Identities=23% Similarity=0.346 Sum_probs=34.3
Q ss_pred eEEEEcCCCChhHhhHHhh--hhcCC--eEEcCCCCccccCCCC--cccccceEEeeCCCCcccccccC
Q 016010 125 LLLWLNGGPGCSSLGYGAM--SELGP--FRVNKDGKTLFRNNYA--WNNVANVVFLESPAGVGFSYSST 187 (397)
Q Consensus 125 lvlWLnGGPGcSS~~~g~~--~E~GP--~~v~~~~~~l~~N~~s--W~~~anvLfiDqP~GvGfSy~~~ 187 (397)
|=|.+.| .|||++.|.+- .|..| ..+..+|-++...+.+ +-+-+-|=|++...|.||-+.++
T Consensus 26 lRi~v~~-~GC~G~~y~~~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~NP 93 (107)
T TIGR01997 26 IRLGVKK-TGCAGMEYVLDLVSEPKKDDDLIEHDGAKVFVAPEAVLFILGTQVDFVRTTLRQGFKFNNP 93 (107)
T ss_pred EEEEEEC-CCCCCcEEEeeecCCCCCCCEEEecCCEEEEEcHHHHhhhCCCEEEEEEcCCcceEEEECC
Confidence 3444443 47766544331 22222 3334444445544444 44456688999999999988553
No 205
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=20.43 E-value=58 Score=29.34 Aligned_cols=14 Identities=29% Similarity=0.814 Sum_probs=10.7
Q ss_pred CCeEEEEcCCCChh
Q 016010 123 NPLLLWLNGGPGCS 136 (397)
Q Consensus 123 ~PlvlWLnGGPGcS 136 (397)
+|.||||.|=||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 58999999977664
No 206
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=20.37 E-value=59 Score=22.39 Aligned_cols=11 Identities=36% Similarity=1.075 Sum_probs=5.9
Q ss_pred CeEEEEcCCCC
Q 016010 124 PLLLWLNGGPG 134 (397)
Q Consensus 124 PlvlWLnGGPG 134 (397)
--.||+.|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 44789999887
Done!