Query 016016
Match_columns 396
No_of_seqs 281 out of 1683
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:27:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016016.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016016hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rss_A Putative uncharacterize 100.0 4.9E-44 1.7E-48 372.2 24.3 283 17-331 187-472 (502)
2 3rpz_A ADP/ATP-dependent NAD(P 100.0 3.9E-44 1.3E-48 347.8 21.7 237 62-330 8-247 (279)
3 2r3b_A YJEF-related protein; p 100.0 1.7E-42 5.8E-47 341.0 19.2 241 62-331 22-264 (310)
4 3bgk_A SMU.573, putative uncha 100.0 1.3E-42 4.3E-47 342.0 18.2 240 62-330 36-280 (311)
5 3k5w_A Carbohydrate kinase; 11 100.0 1.5E-39 5E-44 336.3 19.8 260 15-330 177-443 (475)
6 3hpd_A Hydroxyethylthiazole ki 100.0 3.4E-29 1.2E-33 240.9 16.9 208 102-350 4-229 (265)
7 3dzv_A 4-methyl-5-(beta-hydrox 100.0 2.7E-27 9.4E-32 228.8 19.8 182 164-361 50-255 (273)
8 3nl6_A Thiamine biosynthetic b 99.9 4.6E-26 1.6E-30 238.9 20.7 215 100-351 251-505 (540)
9 1v8a_A Hydroxyethylthiazole ki 99.9 3.9E-26 1.3E-30 219.6 17.4 188 104-318 6-210 (265)
10 3rm5_A Hydroxymethylpyrimidine 99.9 6.5E-26 2.2E-30 238.5 19.4 226 78-333 15-274 (550)
11 1ekq_A Hydroxyethylthiazole ki 99.9 1.6E-24 5.5E-29 208.8 18.1 196 103-324 7-219 (272)
12 2i5b_A Phosphomethylpyrimidine 99.9 5.1E-22 1.7E-26 189.1 20.4 210 86-324 4-237 (271)
13 1ub0_A THID, phosphomethylpyri 99.9 7.1E-22 2.4E-26 186.6 14.2 204 86-324 2-231 (258)
14 3h74_A Pyridoxal kinase; PSI-I 99.9 2.2E-21 7.4E-26 187.8 16.4 206 86-324 4-236 (282)
15 3mbh_A Putative phosphomethylp 99.9 3.4E-21 1.2E-25 187.1 15.9 213 86-325 8-247 (291)
16 1jxh_A Phosphomethylpyrimidine 99.8 1.1E-19 3.7E-24 175.4 18.4 207 85-324 25-256 (288)
17 3pzs_A PM kinase, pyridoxamine 99.8 8.8E-19 3E-23 169.5 20.4 209 86-324 5-247 (289)
18 3zs7_A Pyridoxal kinase; trans 99.8 1.3E-17 4.5E-22 162.6 19.3 210 85-324 3-249 (300)
19 2ddm_A Pyridoxine kinase; pyri 99.7 9.7E-16 3.3E-20 146.7 20.0 212 86-324 16-254 (283)
20 1rkd_A Ribokinase; carbohydrat 99.3 4.5E-11 1.5E-15 115.1 18.6 156 157-325 119-277 (309)
21 3umo_A 6-phosphofructokinase i 99.3 3.3E-11 1.1E-15 116.0 16.3 159 158-325 113-278 (309)
22 3ry7_A Ribokinase; transferase 99.3 1.2E-10 4.2E-15 111.6 18.8 157 156-325 117-277 (304)
23 2yxt_A Pyridoxal kinase; beta 99.3 9.6E-11 3.3E-15 113.5 17.2 148 170-324 74-257 (312)
24 3ie7_A LIN2199 protein; phosph 99.3 1.4E-11 4.8E-16 119.4 10.5 145 166-324 127-274 (320)
25 3cqd_A 6-phosphofructokinase i 99.3 1.1E-10 3.6E-15 112.5 16.4 146 169-325 128-278 (309)
26 2jg5_A Fructose 1-phosphate ki 99.2 4.2E-11 1.4E-15 115.1 12.6 158 158-325 108-271 (306)
27 2f02_A Tagatose-6-phosphate ki 99.2 5.7E-11 2E-15 115.5 13.3 151 167-325 124-279 (323)
28 3kzh_A Probable sugar kinase; 99.2 1.1E-10 3.6E-15 113.9 14.5 155 157-324 121-278 (328)
29 2qhp_A Fructokinase; NP_810670 99.2 1.4E-10 4.8E-15 110.9 14.2 152 168-325 110-269 (296)
30 3ktn_A Carbohydrate kinase, PF 99.2 6.9E-11 2.4E-15 115.7 11.0 159 167-325 124-302 (346)
31 2fv7_A Ribokinase; structural 99.2 2.1E-10 7.3E-15 112.0 13.9 157 157-325 139-302 (331)
32 2abq_A Fructose 1-phosphate ki 99.1 6.8E-10 2.3E-14 106.8 15.1 158 158-325 108-271 (306)
33 4e69_A 2-dehydro-3-deoxyglucon 99.1 1.5E-09 5E-14 106.1 16.3 148 168-325 141-301 (328)
34 4e84_A D-beta-D-heptose 7-phos 99.1 2.2E-09 7.6E-14 106.2 17.2 146 163-325 177-328 (352)
35 4du5_A PFKB; structural genomi 99.1 6E-10 2E-14 109.1 12.7 148 169-325 149-307 (336)
36 2afb_A 2-keto-3-deoxygluconate 99.1 3.9E-10 1.3E-14 110.7 10.8 158 168-325 134-314 (351)
37 1vm7_A Ribokinase; TM0960, str 99.1 2E-09 6.7E-14 104.3 15.3 141 169-325 137-280 (311)
38 3lhx_A Ketodeoxygluconokinase; 99.1 1.2E-09 4E-14 105.9 13.4 157 158-324 115-287 (319)
39 3iq0_A Putative ribokinase II; 99.1 3.5E-10 1.2E-14 110.3 9.7 147 169-324 127-281 (330)
40 3ljs_A Fructokinase; fructokia 99.1 2.1E-10 7.2E-15 112.1 7.9 182 169-364 126-332 (338)
41 2nwh_A AGR_C_3442P, carbohydra 99.0 2.2E-09 7.4E-14 104.0 14.7 154 158-325 118-277 (317)
42 2jg1_A Tagatose-6-phosphate ki 99.0 1.7E-09 5.7E-14 105.7 13.9 150 168-325 143-296 (330)
43 2ajr_A Sugar kinase, PFKB fami 99.0 2.5E-10 8.5E-15 111.5 7.6 149 167-325 141-296 (331)
44 2rbc_A Sugar kinase, AGR_C_456 99.0 6.2E-09 2.1E-13 102.5 15.8 138 169-325 154-298 (343)
45 1bx4_A Protein (adenosine kina 98.9 2.9E-09 1E-13 104.1 11.1 154 166-325 155-322 (345)
46 3hj6_A Fructokinase, FRK; fruc 98.9 9.9E-10 3.4E-14 106.9 7.5 148 168-325 140-297 (327)
47 3vas_A Putative adenosine kina 98.9 2.6E-09 8.8E-14 106.3 10.5 162 157-325 161-342 (370)
48 2qcv_A Putative 5-dehydro-2-de 98.9 6.6E-09 2.3E-13 100.9 13.1 150 170-325 136-295 (332)
49 4e3a_A Sugar kinase protein; s 98.9 1.9E-09 6.6E-14 106.4 9.4 148 168-325 167-322 (352)
50 3kd6_A Carbohydrate kinase, PF 98.8 1.5E-08 5E-13 98.1 11.3 140 168-324 115-265 (313)
51 3pl2_A Sugar kinase, ribokinas 98.8 3.9E-08 1.3E-12 94.9 14.1 146 169-325 132-287 (319)
52 3ikh_A Carbohydrate kinase; tr 98.8 1.4E-08 4.9E-13 97.6 10.9 137 157-324 116-257 (299)
53 2abs_A Adenosine kinase, AK; r 98.8 1.8E-08 6.1E-13 100.3 11.6 155 166-325 174-360 (383)
54 3otx_A Adenosine kinase, putat 98.8 3.2E-08 1.1E-12 96.8 12.2 151 167-325 157-323 (347)
55 3loo_A Anopheles gambiae adeno 98.8 2.7E-08 9.1E-13 98.5 11.3 152 166-324 170-338 (365)
56 1v1a_A 2-keto-3-deoxygluconate 98.7 9.4E-08 3.2E-12 91.9 12.5 143 169-325 122-273 (309)
57 1tyy_A Putative sugar kinase; 98.7 1.1E-08 3.7E-13 100.3 5.6 147 170-325 139-299 (339)
58 3h49_A Ribokinase; transferase 98.7 4.6E-08 1.6E-12 95.0 9.6 141 169-324 132-283 (325)
59 3go6_A Ribokinase RBSK; phosph 98.7 2.2E-08 7.5E-13 97.1 7.2 162 167-365 138-309 (310)
60 2pkf_A Adenosine kinase; trans 98.6 4.2E-07 1.4E-11 88.7 15.0 138 169-325 145-289 (334)
61 2c4e_A Sugar kinase MJ0406; tr 98.6 8.4E-08 2.9E-12 92.1 9.2 134 171-325 129-269 (302)
62 2v78_A Fructokinase; transfera 98.6 1.3E-07 4.6E-12 91.0 10.3 144 169-325 125-280 (313)
63 3ewm_A Uncharacterized sugar k 98.6 1E-07 3.4E-12 92.0 9.0 175 169-369 121-309 (313)
64 1vk4_A PFKB carbohydrate kinas 98.6 1.4E-07 4.9E-12 90.5 9.8 138 171-325 118-269 (298)
65 3b1n_A Ribokinase, putative; r 98.6 4.2E-07 1.4E-11 88.5 13.1 135 171-325 134-275 (326)
66 2dcn_A Hypothetical fructokina 98.5 5.3E-07 1.8E-11 86.6 10.0 143 169-325 125-278 (311)
67 2hlz_A Ketohexokinase; non-pro 98.3 1.4E-05 4.7E-10 77.1 15.0 137 170-325 144-294 (312)
68 4gm6_A PFKB family carbohydrat 98.3 2.4E-06 8.2E-11 83.5 9.4 155 167-325 145-315 (351)
69 3uq6_A Adenosine kinase, putat 98.2 7.5E-06 2.6E-10 81.1 12.5 155 166-325 174-344 (372)
70 3bf5_A Ribokinase related prot 98.2 3.5E-06 1.2E-10 81.3 9.3 127 171-325 139-268 (306)
71 1jw9_B Molybdopterin biosynthe 57.1 70 0.0024 29.1 10.3 34 86-123 32-65 (249)
72 4fxs_A Inosine-5'-monophosphat 56.2 47 0.0016 33.8 9.8 126 63-211 198-342 (496)
73 4avf_A Inosine-5'-monophosphat 52.1 1.4E+02 0.0049 30.1 12.6 114 78-211 208-340 (490)
74 3rcm_A TATD family hydrolase; 49.0 20 0.00069 33.8 5.3 81 161-243 78-172 (287)
75 3usb_A Inosine-5'-monophosphat 48.1 2.1E+02 0.0071 29.1 13.1 126 63-211 223-367 (511)
76 4af0_A Inosine-5'-monophosphat 46.7 52 0.0018 34.2 8.2 115 78-211 259-392 (556)
77 3qvo_A NMRA family protein; st 41.1 1E+02 0.0035 26.9 8.6 41 164-207 80-120 (236)
78 1xwy_A DNAse TATD, deoxyribonu 38.7 42 0.0014 30.2 5.6 52 160-211 75-133 (264)
79 3sbx_A Putative uncharacterize 36.5 2.2E+02 0.0076 25.0 11.6 43 168-213 104-149 (189)
80 3o9z_A Lipopolysaccaride biosy 35.0 1.4E+02 0.0047 27.9 8.7 32 171-209 71-102 (312)
81 1zud_1 Adenylyltransferase THI 34.7 2.6E+02 0.0088 25.2 11.1 35 85-123 28-62 (251)
82 1t35_A Hypothetical protein YV 34.6 2E+02 0.0067 25.2 9.2 41 169-212 94-137 (191)
83 2iz6_A Molybdenum cofactor car 34.5 2.1E+02 0.0073 24.8 9.3 123 85-242 44-168 (176)
84 3bq9_A Predicted rossmann fold 34.3 2.2E+02 0.0074 28.9 10.3 41 167-210 240-286 (460)
85 3r6d_A NAD-dependent epimerase 33.5 2.2E+02 0.0076 24.2 9.4 42 164-210 65-106 (221)
86 3oa2_A WBPB; oxidoreductase, s 32.6 1.5E+02 0.0053 27.7 8.7 32 171-209 72-103 (318)
87 3e8x_A Putative NAD-dependent 32.4 86 0.0029 27.3 6.5 19 166-184 78-96 (236)
88 3ipw_A Hydrolase TATD family p 32.3 45 0.0015 32.2 4.8 81 162-244 116-214 (325)
89 3h8v_A Ubiquitin-like modifier 31.2 3.1E+02 0.011 25.7 10.5 36 84-123 35-70 (292)
90 1zzm_A Putative deoxyribonucle 31.1 57 0.002 29.1 5.1 52 160-211 75-135 (259)
91 3qua_A Putative uncharacterize 31.0 2.8E+02 0.0096 24.6 11.3 41 169-212 114-157 (199)
92 3eag_A UDP-N-acetylmuramate:L- 30.6 1.3E+02 0.0046 28.2 7.9 34 171-211 65-98 (326)
93 3e48_A Putative nucleoside-dip 30.5 2.9E+02 0.0098 24.5 11.5 42 164-205 57-99 (289)
94 3lk7_A UDP-N-acetylmuramoylala 29.5 1.4E+02 0.0047 29.6 8.0 33 171-210 70-103 (451)
95 3rui_A Ubiquitin-like modifier 27.5 1.6E+02 0.0055 28.5 7.9 38 82-123 31-68 (340)
96 3e2v_A 3'-5'-exonuclease; stru 26.8 68 0.0023 31.9 5.1 51 161-211 136-204 (401)
97 3gh1_A Predicted nucleotide-bi 26.5 4.5E+02 0.015 26.6 11.0 73 167-242 242-328 (462)
98 3k5i_A Phosphoribosyl-aminoimi 26.2 2.2E+02 0.0075 27.5 8.8 31 85-119 24-54 (403)
99 3ic5_A Putative saccharopine d 25.1 2.1E+02 0.0073 21.3 7.1 19 164-182 61-79 (118)
100 3h2s_A Putative NADH-flavin re 24.6 3.1E+02 0.011 23.1 8.7 41 169-209 59-103 (224)
101 1wek_A Hypothetical protein TT 24.5 3.8E+02 0.013 23.9 10.0 27 85-116 68-96 (217)
102 4gsl_A Ubiquitin-like modifier 24.4 1.8E+02 0.0061 30.6 8.0 46 72-123 315-360 (615)
103 3h5n_A MCCB protein; ubiquitin 24.2 1.5E+02 0.0053 28.4 7.1 35 85-123 118-152 (353)
104 1j6o_A TATD-related deoxyribon 23.8 95 0.0032 28.1 5.3 51 161-211 84-141 (268)
105 3guw_A Uncharacterized protein 23.4 44 0.0015 31.0 2.9 44 168-211 86-131 (261)
106 3dhn_A NAD-dependent epimerase 23.0 3.4E+02 0.012 22.9 9.5 44 164-207 59-107 (227)
107 3dqp_A Oxidoreductase YLBE; al 21.2 3.7E+02 0.013 22.6 8.8 21 164-184 55-75 (219)
108 2xio_A Putative deoxyribonucle 20.8 67 0.0023 29.8 3.6 81 161-243 88-185 (301)
109 4ffl_A PYLC; amino acid, biosy 20.7 2.2E+02 0.0075 26.7 7.4 28 87-118 3-30 (363)
No 1
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=100.00 E-value=4.9e-44 Score=372.23 Aligned_cols=283 Identities=28% Similarity=0.408 Sum_probs=226.6
Q ss_pred ccccccchhhhhhcceEEEeeeCCCccccCcccccccccccccccccChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCC
Q 016016 17 VKNCMLASSAVFRRQQFLIRSLGGYSDHIEPRRMQDIRSMSGTTFEADAENVMREITPVLDPSKHKGQAGKIAVIGGCRE 96 (396)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~r~~~~hKg~~G~vlvIgGSd~ 96 (396)
.|.+....++--.-|++++.+||+++..+++. ..+.+++++ ++.++|+|.+++|||++|+|++||||.+
T Consensus 187 ~K~gl~~~~g~~~~G~v~v~dIGip~~~~~~~----------~~~~~~~~~-~~~~lp~r~~~~hKg~~G~vlvigGs~~ 255 (502)
T 3rss_A 187 PKIGHILFPGRDLTGKLKVANIGHPVHLINSI----------NRYVITREM-VRSLLPERPRDSHKGTYGKVLIIAGSRL 255 (502)
T ss_dssp CCHHHHSTTHHHHHCEEEEECCSCCHHHHTTC----------SEEECCHHH-HHHHSCCCCSSCCGGGGCEEEEECCCSS
T ss_pred hHHHHhccchhhccceEEEEcCCCChHHhhcc----------chhhcCHHH-HHHhcCCCCCCCCCCCCceEEEEECCCC
Confidence 33333333333456999999999987654321 234566666 4778999999999999999999999999
Q ss_pred CCCcHHHHHHHHhhcCCCEEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcchhHHHHHHHHhccCCEE
Q 016016 97 YTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCL 176 (396)
Q Consensus 97 ~~GA~ilAalaAlr~GaglVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dal 176 (396)
|+||++||+.+|+|+|+|+||+.++++....+....||+|+.++.++ ...++.++++++.++++++|++
T Consensus 256 ~~GA~~Laa~aAlr~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~-----------~~~~~~~~~~~~~~~~~~~dav 324 (502)
T 3rss_A 256 YSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTE-----------KGFFSLQNLQECLELSKDVDVV 324 (502)
T ss_dssp CCSHHHHHHHHHHHTTCSEEEEEEETTTHHHHHHHCTTSEEEEECCS-----------SSSCCGGGHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHHhCcCeEEEEEcHHHHHHHhhcCCeEEEeccccc-----------ccccchhhHHHHHHHhccCCEE
Confidence 99999999999999999999999999999999999999999876431 1345556677888888999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCC-CCeeecCCHHHHHHHhcccccCCCCCCcH
Q 016016 177 VVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGY-PLAVLTPNVNEYKRLVQKVLNCEVNDRDA 255 (396)
Q Consensus 177 vIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~-~~~VITPN~~E~a~L~g~~~~~~~~~~d~ 255 (396)
+||||++++++..+.+.++++ +.++|+|||||++.++. .++++.+ .++|||||.+|+++|+|.+.. ..+++
T Consensus 325 viGpGlg~~~~~~~~~~~~l~---~~~~pvVlDadgl~~l~--~~ll~~~~~~~vlTPN~~E~~~L~g~~~~--~~~~d- 396 (502)
T 3rss_A 325 AIGPGLGNNEHVREFVNEFLK---TLEKPAVIDADAINVLD--TSVLKERKSPAVLTPHPGEMARLVKKTVG--DVKYN- 396 (502)
T ss_dssp EECTTCCCSHHHHHHHHHHHH---HCCSCEEECHHHHHTCC--HHHHHHCSSCEEECCCHHHHHHHHTCCHH--HHTTC-
T ss_pred EEeCCCCCCHHHHHHHHHHHH---hcCCCEEEeCcccchhc--HHHHhccCCCEEEeCCHHHHHHHhCCCcc--chHHH-
Confidence 999999998877666665543 45899999999999876 3455433 479999999999999986521 01246
Q ss_pred HHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCC-CCCCchHHHHHHHHHHHhccCChHHHHH-HHhhhhh
Q 016016 256 PELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAKGKATT-RLYYNLS 331 (396)
Q Consensus 256 ~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~-~t~GTGDvLAGiIAa~LA~g~~l~~A~~-~~y~~~~ 331 (396)
.++++++++++++ +|++||.+|+|++++.++ ++..|++. +++||||+|+|+|++|+++|.++.+|+. ++|+|..
T Consensus 397 ~~aa~~la~~~~~-~VvlKG~~~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~~~~Aa~~A~~~hg~ 472 (502)
T 3rss_A 397 YELAEEFAKENDC-VLVLKSATTIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLSPLEASTVSVYLHGF 472 (502)
T ss_dssp HHHHHHHHHHHTS-EEEECSSSEEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-EEEEeCCCeEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 8899999999987 677899999999988655 55678887 6999999999999999999988776655 6777753
No 2
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=100.00 E-value=3.9e-44 Score=347.83 Aligned_cols=237 Identities=22% Similarity=0.322 Sum_probs=191.6
Q ss_pred ccChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchhhhcccCCceeeeccc
Q 016016 62 EADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPIL 141 (396)
Q Consensus 62 ~~~~~~~~~~~lp~r~~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~~i~~~~PE~~~~~~~ 141 (396)
.++.++ ++.++|+|++++|||++|+|++||||.+|+||++||+.+|+|+|+|+||+.+++.....+....||+|+.+.
T Consensus 8 ~~~~~~-~~~~lp~r~~~~hKg~~G~vlvigGs~~~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~~~~~~Pe~m~~~~- 85 (279)
T 3rpz_A 8 FWTEEH-VRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRD- 85 (279)
T ss_dssp BCCHHH-HHHHCCCCCSSCCGGGGCEEEEECCBTTBCHHHHHHHHHHHTTTCSEEEEEECTTTHHHHTTTCTTCEEEET-
T ss_pred cCCHHH-HHhhCCCCCCcCCCcCCCEEEEEeCCCCCCcHHHHHHHHHHHhCCCeEEEEecHHHHHHHHhcCCeeEEccc-
Confidence 456665 577899999999999999999999999999999999999999999999999999999999999999998521
Q ss_pred ccccccCCCchhhhhhcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchh
Q 016016 142 EESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSID 221 (396)
Q Consensus 142 ~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ 221 (396)
..++ .+..++++++|+++||||++++++..+.+..++ +.+.|+|||+||+++ .
T Consensus 86 --------------~~~~----~~~~~~l~~~davviGPGlg~~~~~~~~~~~~l----~~~~p~VlDAdal~~-~---- 138 (279)
T 3rpz_A 86 --------------GWKK----AADAQLEETYRAIAIGPGLPQTESVQQAVDHVL----TADCPVILDAGALAK-R---- 138 (279)
T ss_dssp --------------HHHH----TTTSCCSSCCSEEEECTTCCCCHHHHHHHHHHT----TSSSCEEECGGGCCS-C----
T ss_pred --------------cccc----hhhHhhccCCCEEEECCCCCCCHHHHHHHHHHH----hhCCCEEEECCccch-h----
Confidence 0000 012234578999999999999877655555443 467799999999987 2
Q ss_pred hhc-CCCCeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCC-CCC
Q 016016 222 LVS-GYPLAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RCG 299 (396)
Q Consensus 222 ll~-~~~~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~-~t~ 299 (396)
.++ ..+++|||||.+|+++|+|.+.. ..++|+.++++++++++++ +|++||.+|+|+++++.++++..|++. +++
T Consensus 139 ~l~~~~~~~vlTPN~~E~~~L~g~~~~--~~~~d~~~aa~~la~~~~~-~VvlKG~~~vi~~~~g~~~~~~~g~~~~at~ 215 (279)
T 3rpz_A 139 TYPKREGPVILTPHPGEFFRMTGVPVN--ELQKKRAEYAKEWAAQLQT-VIVLKGNQTVIAFPDGDCWLNPTGNGALAKG 215 (279)
T ss_dssp CCCCCSSCEEECCCHHHHHHHHCCCHH--HHTTSHHHHHHHHHHHHTS-EEEECSTTCEEECTTSCEEECCCCCGGGCST
T ss_pred hhhhccCCEEEecCHHHHHHHhCCCcc--chHHHHHHHHHHHHHHcCe-EEEEeCCCcEEECCCceEEEeCCCCCCCCCC
Confidence 222 23579999999999999986521 0125788999999999986 678899999999988655677778877 699
Q ss_pred CchHHHHHHHHHHHhccCChHHHHH-HHhhhh
Q 016016 300 GQGDILSGSVAVFLSWARAKGKATT-RLYYNL 330 (396)
Q Consensus 300 GTGDvLAGiIAa~LA~g~~l~~A~~-~~y~~~ 330 (396)
||||+|||+|++|+++|.++.+|+. ++|+|.
T Consensus 216 GtGD~Lag~iaa~lA~g~~~~~A~~~a~~lh~ 247 (279)
T 3rpz_A 216 GTGDTLTGMILGMLCCHEDPKHAVLNAVYLHG 247 (279)
T ss_dssp THHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 9999999999999999988766644 677765
No 3
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=100.00 E-value=1.7e-42 Score=340.99 Aligned_cols=241 Identities=22% Similarity=0.339 Sum_probs=191.4
Q ss_pred ccChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchhhhcccCCceeeeccc
Q 016016 62 EADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPIL 141 (396)
Q Consensus 62 ~~~~~~~~~~~lp~r~~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~~i~~~~PE~~~~~~~ 141 (396)
.++.++ ++.++|+|++++|||++|+|++||||++|+||+++|+++|+++|+|+||+.|++++...+....||+|+.++.
T Consensus 22 ~~~~~~-~~~~lp~r~~~~hKg~~G~vlvIaGsd~~~GA~ilA~~aal~~Gaglvt~~t~~~~~~~v~~~~pe~~~~~~~ 100 (310)
T 2r3b_A 22 YLSKDI-LEEVITQRPSDSYKSNFGRVVLIGGNRQYGGAIIMSTEACINSGAGLTTVITDVKNHGPLHARCPEAMVVGFE 100 (310)
T ss_dssp ECCHHH-HHHHCBCCCTTCCGGGGCEEEEECCCSSSHHHHHHHHHHHHHHTCSEEEEECCGGGHHHHHHHCTTCEEECTT
T ss_pred ecCHHH-HHhhCCCCCCCCCCCcCCEEEEEECCCCCCcHHHHHHHHHHHhCcCcEEEEEChhhHhHHhhCChhheEecCC
Confidence 345554 4678899999999999999999999999999999999999999999999999999988888999999997753
Q ss_pred ccccccCCCchhhhhhcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchh
Q 016016 142 EESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSID 221 (396)
Q Consensus 142 ~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ 221 (396)
. .++++++++++|+++||||++.+.+..+.+.++++..+ .++|+||||||+.++..+.+
T Consensus 101 ~--------------------~~ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~ 159 (310)
T 2r3b_A 101 E--------------------TVLLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQGNF 159 (310)
T ss_dssp C--------------------HHHHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHTTC
T ss_pred c--------------------HHHHHHHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccchh
Confidence 1 13566777789999999999988888888888887543 57899999999988775443
Q ss_pred hhcCCCCeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCC-CCCC
Q 016016 222 LVSGYPLAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RCGG 300 (396)
Q Consensus 222 ll~~~~~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~-~t~G 300 (396)
+++...++|||||.+|+++|+|.+.. + .++++ +.++++++++ +|++||.+|+|++++.+ +++..+++. +++|
T Consensus 160 ~l~~~~~~viTPN~~E~~~L~g~~~~-~-~~~~~---a~~aA~~lg~-~VvlKG~~~vi~~~~~~-~~~~~g~~~~~t~G 232 (310)
T 2r3b_A 160 SLTYPEKVVFTPHQMEWQRLSHLPIE-Q-QTLAN---NQRQQAKLGS-TIVLKSHRTTIFHAGEP-FQNTGGNPGMATGG 232 (310)
T ss_dssp CCSSGGGEEEECCHHHHHHHHCCCGG-G-CCHHH---HHHHHHHHTS-EEEECSTTCEEECSSSC-EECCCCCGGGCSTT
T ss_pred hhcCCCCEEEcCCHHHHHHHhCCCCC-c-ccchH---HHHHHHHhCc-EEEEeCCceEEEECCEE-EEECCCCCCCCCCC
Confidence 34322368999999999999986521 0 11133 2344444565 67889999999984444 455667766 7999
Q ss_pred chHHHHHHHHHHHhccCChHHHHH-HHhhhhh
Q 016016 301 QGDILSGSVAVFLSWARAKGKATT-RLYYNLS 331 (396)
Q Consensus 301 TGDvLAGiIAa~LA~g~~l~~A~~-~~y~~~~ 331 (396)
|||+|||+|++|+++|.++.+|+. ++|.+..
T Consensus 233 tGD~Lag~Iaa~lA~g~~~~eA~~~A~~~~~~ 264 (310)
T 2r3b_A 233 TGDTLAGIIAGFLAQFKPTIETIAGAVYLHSL 264 (310)
T ss_dssp HHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 999999999999999987766654 6676643
No 4
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=100.00 E-value=1.3e-42 Score=342.02 Aligned_cols=240 Identities=23% Similarity=0.355 Sum_probs=193.6
Q ss_pred ccChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchhhhcccCCceeeeccc
Q 016016 62 EADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPIL 141 (396)
Q Consensus 62 ~~~~~~~~~~~lp~r~~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~~i~~~~PE~~~~~~~ 141 (396)
.++.++ ++.++|+|.+++|||++|+||+|||||+|+||+++|+++|+++|+|+||++|+|++...+....||+|+.++.
T Consensus 36 ~~~~~~-~~~~lp~r~~~~hKg~~G~vlvIaGsd~~~GAgilA~~aal~~Gaglvt~~t~q~~~~~v~~~~pe~~~~~~~ 114 (311)
T 3bgk_A 36 IIDDLL-TKKIIKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNSGAGLVTVATHKDNITALHSHLPEAMAFDMV 114 (311)
T ss_dssp EECHHH-HHHHSCCCCSSCCSSTTCEEEEECCCTTCHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHHCTTSEEEETT
T ss_pred ccCHHH-HHhhCCCCCCCCCCccCCEEEEEECCCCCCCHHHHHHHHHHHhCcCeEEEEEChhhHhHHhhCChhHheeccc
Confidence 345555 4677899999999999999999999999999999999999999999999999999988888999999997642
Q ss_pred ccccccCCCchhhhhhcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchh
Q 016016 142 EESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSID 221 (396)
Q Consensus 142 ~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ 221 (396)
. .++++++++++|+++||||++.+++..+.+.++++.++ .++|+||||||+.++..+.+
T Consensus 115 ~--------------------~~ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~ 173 (311)
T 3bgk_A 115 E--------------------KDRLSEQITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKRKP 173 (311)
T ss_dssp C--------------------HHHHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHCC-
T ss_pred c--------------------HHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccChh
Confidence 1 13566777789999999999988888888888887543 57899999999988775433
Q ss_pred h-hcCCCCeeecCCHHHHHHHhcccccCCCCCCcH-HHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCC-CC
Q 016016 222 L-VSGYPLAVLTPNVNEYKRLVQKVLNCEVNDRDA-PELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RC 298 (396)
Q Consensus 222 l-l~~~~~~VITPN~~E~a~L~g~~~~~~~~~~d~-~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~-~t 298 (396)
+ ++ ..++|||||..|+++|+|.+.. ..++++ .+++++|++ ++ +|++||.+|++++++.+ +++..+++. ++
T Consensus 174 l~L~-~~~~viTPN~~E~~~L~g~~~~--~~~~d~~~~aa~~l~~--g~-~VvlkG~~~~i~~~~~~-~~~~~~~~~~~t 246 (311)
T 3bgk_A 174 AIWP-TKQIILTPHQKEWERLSGLTIP--EQIEAATQTALAHFPK--ET-ILVAKSHQTKIYQGQKI-GHIQVGGPYQAT 246 (311)
T ss_dssp CCCS-CSCEEEECCSCC-CTTTCCCST--TCCHHHHHHHHTTSCT--TC-EEEECSSSCEEEETTEE-EEECCCCGGGCS
T ss_pred hcCC-CCCEEECCcHHHHHHHhCCCCC--cchhhHHHHHHHHHhc--CC-EEEEeCCCeEEEECCEE-EEECCCCCCCCC
Confidence 3 33 3478999999999999986521 112356 778888876 65 67889999999984444 455567665 79
Q ss_pred CCchHHHHHHHHHHHhc-cCChHHHHH-HHhhhh
Q 016016 299 GGQGDILSGSVAVFLSW-ARAKGKATT-RLYYNL 330 (396)
Q Consensus 299 ~GTGDvLAGiIAa~LA~-g~~l~~A~~-~~y~~~ 330 (396)
+||||+|||+|++|+++ |.++.+|+. ++|.+.
T Consensus 247 ~GtGD~Lag~iaa~lA~~g~~~~eA~~~A~~~~~ 280 (311)
T 3bgk_A 247 GGMGDTLAGMIAGFVAQFHTDRFEVAAAAVFLHS 280 (311)
T ss_dssp TTHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH
Confidence 99999999999999999 998776655 566554
No 5
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=100.00 E-value=1.5e-39 Score=336.29 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=191.8
Q ss_pred ccccccccchhhhhhcceEEEeeeCCCccccCcccccccccccccccccChhhHHHhhCCCC-CCCCCCCCCCeEEEEec
Q 016016 15 GSVKNCMLASSAVFRRQQFLIRSLGGYSDHIEPRRMQDIRSMSGTTFEADAENVMREITPVL-DPSKHKGQAGKIAVIGG 93 (396)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~r-~~~~hKg~~G~vlvIgG 93 (396)
...|.+....++--.-|++++.+||+++..++.. ...+.++++++ .+|+| ++++|||++|++++|||
T Consensus 177 ~~~K~gl~~~~~~~~~G~v~v~dIGip~~~~~~~---------~~~~~~~~~~~---~lp~r~~~~~hKg~~G~vlvigG 244 (475)
T 3k5w_A 177 GAIKSCLLSDRAKDYVGELKVGHLGVFNPIYEIP---------TDTFLLEKSDL---KLPLRDKKNAHKGDYGHAHVLLG 244 (475)
T ss_dssp SSEEGGGGCGGGHHHHCEEEEECCSSCHHHHCCC---------CSEEECCGGGC---CCCCCCCSSCCGGGGCEEEEEEC
T ss_pred cChHHHhcCcchHhhcCCeEEeCCCCChHHhccC---------ccceecCHHHh---cccCCCCCCCCCCCCCeEEEEeC
Confidence 3344444443444556999999999998764421 11244566653 36776 79999999999999999
Q ss_pred CCCCCCcHHHHHHHHhhcCCCEEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcchhHHHHHHHHhccC
Q 016016 94 CREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERF 173 (396)
Q Consensus 94 Sd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~ 173 (396)
| |+||++||+.+|+|+|+|+||+.+++..... ...+||+|+.+. +.+++
T Consensus 245 s--~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~-~~~~pe~m~~~~----------------------------~~~~~ 293 (475)
T 3k5w_A 245 K--HSGAGLLSALSALSFGSGVVSVQALECEITS-NNKPLELVFCEN----------------------------FPNLL 293 (475)
T ss_dssp S--SHHHHHHHHHHHHHTTCSEEEEEESSSCCSS-SSSCTTSEEESS----------------------------CCSSC
T ss_pred C--CCcHHHHHHHHHHHhCCCeEEEeccHHHhhc-ccCChhheeehh----------------------------hccCC
Confidence 9 9999999999999999999999999873221 345789998642 12578
Q ss_pred CEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCC-CCeeecCCHHHHHHHhcccc-cCCCC
Q 016016 174 DCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGY-PLAVLTPNVNEYKRLVQKVL-NCEVN 251 (396)
Q Consensus 174 dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~-~~~VITPN~~E~a~L~g~~~-~~~~~ 251 (396)
|+++||||++++++ + +.++++ .+ |+|||+|+++... +++.+ +++|||||.+|+++|+|... +.++.
T Consensus 294 ~a~~iGPGlG~~~~--~-l~~~l~----~~-p~VlDADaL~~~~----~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~ 361 (475)
T 3k5w_A 294 SAFALGMGLENIPK--D-FNRWLE----LA-PCVLDAGVFYHKE----ILQALEKEAVLTPHPKEFLSLLNLVGINISML 361 (475)
T ss_dssp SEEEECTTCSSCCT--T-HHHHHH----HS-CEEEEGGGGGSGG----GGTTTTSSEEEECCHHHHHHHHHHTSCCCCTT
T ss_pred CEEEEcCCCCCCHH--H-HHHHHh----cC-CEEEECcccCCch----hhhccCCCEEECCCHHHHHHHhCCccCCCCcc
Confidence 99999999998754 3 555553 24 9999999997532 22222 35999999999999998621 11122
Q ss_pred --CCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCC-CCCCchHHHHHHHHHHHhccCChHHH-HHHHh
Q 016016 252 --DRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAKGKA-TTRLY 327 (396)
Q Consensus 252 --~~d~~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~-~t~GTGDvLAGiIAa~LA~g~~l~~A-~~~~y 327 (396)
.+++.+++++++++++.++|++||.+|+|++++.++ ++++|+|+ +++||||+|||+|++|+|++.+..+| +.++|
T Consensus 362 ~~~~d~~~aa~~la~~~g~~~VvlKG~~~vI~~~~~~~-~~~~g~~~mat~GtGdvLsg~Iaa~lA~g~~~~~Aa~~a~~ 440 (475)
T 3k5w_A 362 ELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVF-INILGSVALAKAGSGDVLAGLILSLLSQNYTPLDAAINASL 440 (475)
T ss_dssp SGGGSCC--CHHHHHHCTTEEEEECSSSEEEEETTEEE-EECCCCGGGCSTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcCCeEEEEeCCCCEEECCCEEE-EECCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 246778999999998334678899999999877654 56789988 69999999999999999999875444 34566
Q ss_pred hhh
Q 016016 328 YNL 330 (396)
Q Consensus 328 ~~~ 330 (396)
+|.
T Consensus 441 lhg 443 (475)
T 3k5w_A 441 AHA 443 (475)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 6
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.96 E-value=3.4e-29 Score=240.87 Aligned_cols=208 Identities=18% Similarity=0.230 Sum_probs=159.4
Q ss_pred HHHHHHHhhcCCCEEEEEecCcchhh----h-c-ccCCceeeecccccccccCCCchhhhhhcchhHHHHHHHHhccCCE
Q 016016 102 YFAAISALKIGADLSHVFCTKDAAPV----I-K-SYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDC 175 (396)
Q Consensus 102 ilAalaAlr~GaglVtv~t~~~~~~~----i-~-~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~da 175 (396)
+.-++..+|.-..+|+++|..-+... + . .-+| +|.... +|++++.+.+++
T Consensus 4 i~~~l~~vr~~~PLvh~iTN~V~~n~~AN~lLA~GasP-iMa~~~-----------------------~E~~e~~~~a~a 59 (265)
T 3hpd_A 4 IIEALKRVRERRPLVHNITNFVVMNTTANALLALGASP-VMAHAE-----------------------EELEEMIRLADA 59 (265)
T ss_dssp HHHHHHHHHHHCCEEEEECCTTTHHHHHHHHHHHTCEE-EECCCT-----------------------TTHHHHHHHCSE
T ss_pred HHHHHHHHHhcCCcEEeccchhhHHHHHHHHHHhCCch-hhcCCH-----------------------HHHHHHHHHCCe
Confidence 34567788888999999997544332 2 1 3344 554321 467778888999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHHHHhccccc---C
Q 016016 176 LVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKVLN---C 248 (396)
Q Consensus 176 lvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a~L~g~~~~---~ 248 (396)
++||+|+++ ++..+.|....+.+++.++|+||||||.+.+..|. +++. .+++|||||.+|+++|+|.... .
T Consensus 60 l~iNiGtl~-~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~-~~~~vIrgN~sEi~~L~g~~~~~~gv 137 (265)
T 3hpd_A 60 VVINIGTLD-SGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILS-RGVDVLKGNFGEISALLGEEGKTRGV 137 (265)
T ss_dssp EEEECTTCC-HHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHH-HCCSEEEEEHHHHHHHHHHHC-----
T ss_pred EEEECCCCC-hHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHh-cCCcEEcCCHHHHHHHhcccCCCCCc
Confidence 999999985 45567788888889999999999999999988774 3444 3689999999999999986532 2
Q ss_pred CC---CCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCCC--CCCchHHHHHHHHHHHhccCChHHHH
Q 016016 249 EV---NDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPRR--CGGQGDILSGSVAVFLSWARAKGKAT 323 (396)
Q Consensus 249 ~~---~~~d~~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~~--t~GTGDvLAGiIAa~LA~g~~l~~A~ 323 (396)
+. ..+++.+.++++++++++ +|++||++|+|+|+++++.+ .+|+|.+ ++||||+|+|+|++|++++.
T Consensus 138 ds~~~~~~d~~~~a~~lA~~~~~-vVvlkG~~d~I~dg~~~~~~-~~G~~~m~~vtGtGc~Lsg~iaa~lA~~~------ 209 (265)
T 3hpd_A 138 DSLEYGEEEAKKLTMNAAREFNT-TVAVTGAVDYVSDGRRTFAV-YNGHELLGRVTGTGCMVAALTGAFVAVTE------ 209 (265)
T ss_dssp -----CHHHHHHHHHHHHHHTTS-EEEEESSSEEEECSSCEEEE-CCCCGGGGGSTTHHHHHHHHHHHHHTTSC------
T ss_pred cCccccHHHHHHHHHHHHHHhCC-EEEEeCCCeEEEcCCEEEEE-CCCChHhhcCCccchHHHHHHHHHHhcCC------
Confidence 21 124678899999999998 56789999999999988765 6899983 69999999999999999987
Q ss_pred HHHhhhhhhHhhhhhHhhHHHHHhHHH
Q 016016 324 TRLYYNLSFKLGRQLFCFLSLISCLAT 350 (396)
Q Consensus 324 ~~~y~~~~~~aai~~~~~~~~a~~~a~ 350 (396)
++.+++.+..+++.|+|+|+
T Consensus 210 -------~~~Aa~~a~~~~g~Age~Aa 229 (265)
T 3hpd_A 210 -------PLKATTSALVTFGIAAEKAY 229 (265)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHH
T ss_pred -------hHHHHHHHHHHHHHHHHHHH
Confidence 44555666666677777765
No 7
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.95 E-value=2.7e-27 Score=228.77 Aligned_cols=182 Identities=20% Similarity=0.202 Sum_probs=141.1
Q ss_pred HHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHH
Q 016016 164 AEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYK 239 (396)
Q Consensus 164 ~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a 239 (396)
+|++++++.+|+++||+|++. .+..+.+..+++.+++.++|+||||||++.+..+. +++ ...++|||||.+|++
T Consensus 50 ~e~~e~~~~a~alvIn~G~l~-~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll-~~~~~VItpN~~E~~ 127 (273)
T 3dzv_A 50 REFPQMFQQTSALVLNLGHLS-QEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLV-HNQPTVVKGNLSEMR 127 (273)
T ss_dssp GGHHHHHTTCSEEEEECCSCC-HHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHH-HTCCSEEEEEHHHHH
T ss_pred HHHHHHHHHCCeEEEecCCCC-hHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHH-hcCCcEECCCHHHHH
Confidence 467788899999999999984 45567888888888889999999999998876653 344 356899999999999
Q ss_pred HHhccccc---CCCC--C---C---cHHHHHHHHHHhhC-CeEEEEcCCceEEEcCCeEEEEeccCCCC--CCCCchHHH
Q 016016 240 RLVQKVLN---CEVN--D---R---DAPELLQSLAKQIG-GVTILQKGKSDLISDGEIAKSVSIYGSPR--RCGGQGDIL 305 (396)
Q Consensus 240 ~L~g~~~~---~~~~--~---~---d~~~~a~~La~~~g-~vvVllKG~~dvI~d~~~~~~i~~~G~~~--~t~GTGDvL 305 (396)
+|+|.... ++.. + + ++.+++++++++++ + +|++||..|+|+++++++.+ .+|++. .++||||+|
T Consensus 128 ~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~-~VvlkG~~D~i~dg~~~~~~-~~G~~~~~~v~GtGc~L 205 (273)
T 3dzv_A 128 TFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQT-VFLATGIQDVLVSQEQVIVL-QNGVPELDCFTGTGDLV 205 (273)
T ss_dssp HHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTC-EEEEESSSEEEECSSCEEEE-CCCCGGGGSSTTHHHHH
T ss_pred HHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCe-EEEEECCeeEEEcCCEEEEe-CCCCcccCCcCCchHHH
Confidence 99996531 1211 1 2 56788999999998 6 67889999999998887665 578876 479999999
Q ss_pred HHHHHHHHhccCChHHHHHHHhhhhhhHhhhhhHhhHHHHHhHHHHH------HHHHHHhhh
Q 016016 306 SGSVAVFLSWARAKGKATTRLYYNLSFKLGRQLFCFLSLISCLATYS------FLMRLLQSD 361 (396)
Q Consensus 306 AGiIAa~LA~g~~l~~A~~~~y~~~~~~aai~~~~~~~~a~~~a~~~------~~~~~~~~~ 361 (396)
+|+|++|+++|.+ .+.+++.+..+++.|+|+|+-+ +-.++++.+
T Consensus 206 s~~Iaa~lA~g~~------------~~~Aa~~A~~~~~~Age~A~~~~~g~Gsf~~~llD~L 255 (273)
T 3dzv_A 206 GALVAALLGEGNA------------PMTAAVAAVSYFNLCGEKAKTKSQGLADFRQNTLNQL 255 (273)
T ss_dssp HHHHHHHHHHTCC------------HHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC------------HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHH
Confidence 9999999999985 4455666667777777776532 445555555
No 8
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.94 E-value=4.6e-26 Score=238.88 Aligned_cols=215 Identities=15% Similarity=0.095 Sum_probs=161.2
Q ss_pred cHHHHHHHHhhcCCCEEEEEecCcchhhh-----cccCCceeeecccccccccCCCchhhhhhcchhHHHHHHHHhcc-C
Q 016016 100 APYFAAISALKIGADLSHVFCTKDAAPVI-----KSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMER-F 173 (396)
Q Consensus 100 A~ilAalaAlr~GaglVtv~t~~~~~~~i-----~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~-~ 173 (396)
.-+...+..+|....+|+++|..-+.... ..-...+|... .+|++++++. +
T Consensus 251 ~~~~~~~~~vr~~~PLvh~iTN~V~~n~~AN~~La~GasPiM~~~-----------------------~~E~~e~~~~~~ 307 (540)
T 3nl6_A 251 DEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEI-----------------------QSEVNDLAAIPH 307 (540)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHTTSEEECCCC-----------------------HHHHHHHTTSTT
T ss_pred HHHHHHHHHHHhcCCeEEEccccchHHHHHHHHHHcCCChhhcCC-----------------------HHHHHHHHhccC
Confidence 44556678888889999999875444332 22223344422 2688889898 9
Q ss_pred CEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHHHHhcccc---
Q 016016 174 DCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKVL--- 246 (396)
Q Consensus 174 dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a~L~g~~~--- 246 (396)
++++||+||+.+ .+.+..+++.+++.++|+||||||++.+..+. ++++..+++|||||.+|+++|+|...
T Consensus 308 ~alvin~G~l~~---~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g~~~~~~ 384 (540)
T 3nl6_A 308 ATLLLNTGSVAP---PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERM 384 (540)
T ss_dssp CEEEEESSCSCC---HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHTTC-----
T ss_pred CeEEEeCCCCCH---HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHhCCCcccc
Confidence 999999999977 56777888888889999999999998877654 34444568999999999999998642
Q ss_pred -cCCC----CCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcC-------------------CeEEEEeccCC-CCC--CC
Q 016016 247 -NCEV----NDRDAPELLQSLAKQIGGVTILQKGKSDLISDG-------------------EIAKSVSIYGS-PRR--CG 299 (396)
Q Consensus 247 -~~~~----~~~d~~~~a~~La~~~g~vvVllKG~~dvI~d~-------------------~~~~~i~~~G~-~~~--t~ 299 (396)
+++. +.+++.++++++++++++ +|++||+.|+|+|+ ..++.+ .+|+ |.+ ++
T Consensus 385 ~GVds~~~~~~~d~~~aA~~lA~~~~~-vVvlkG~~D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~m~~vt 462 (540)
T 3nl6_A 385 KGVDASSGISNELLIQATKIVAFKYKT-VAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAV-EAGPIEIMGDIT 462 (540)
T ss_dssp ---------CCHHHHHHHHHHHHHTTS-EEEECSSSEEEEECCGGGBCCSSSCCSSCCTTSSCEEEE-ECSCCGGGGSST
T ss_pred cccccccccCHHHHHHHHHHHHHHhCC-EEEEcCCCeEEECCCccccccccccccccccCCccEEEE-CCCChhhccCcc
Confidence 2221 125678899999999997 57889999999998 555544 6888 873 79
Q ss_pred CchHHHHHHHHHHHhccCChHHHHHHHhhhhhhHhhhhhHhhHHHHHhHHHH
Q 016016 300 GQGDILSGSVAVFLSWARAKGKATTRLYYNLSFKLGRQLFCFLSLISCLATY 351 (396)
Q Consensus 300 GTGDvLAGiIAa~LA~g~~l~~A~~~~y~~~~~~aai~~~~~~~~a~~~a~~ 351 (396)
||||+|+|+||+|++++.+- ...|.+++.+..+++.|+++|+-
T Consensus 463 GtGc~Lsg~Iaa~la~~~~~---------~~~~~Aa~~a~~~~~~Ag~~A~~ 505 (540)
T 3nl6_A 463 ASGCSLGSTIACMIGGQPSE---------GNLFHAVVAGVMLYKAAGKIASE 505 (540)
T ss_dssp THHHHHHHHHHHHHHTCCTT---------CBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhcCcCC---------CCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998720 02566777777778888888754
No 9
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.94 E-value=3.9e-26 Score=219.65 Aligned_cols=188 Identities=19% Similarity=0.237 Sum_probs=140.6
Q ss_pred HHHHHhhcCCCEEEEEecCcchhh-----hcccCCceeeecccccccccCCCchhhhhhcchhHHHHHHHHhccCCEEEE
Q 016016 104 AAISALKIGADLSHVFCTKDAAPV-----IKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVV 178 (396)
Q Consensus 104 AalaAlr~GaglVtv~t~~~~~~~-----i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dalvI 178 (396)
..+..+|--..+|+++|..-+... +..-...+|.... +++.++++.+|+++|
T Consensus 6 ~~~~~~r~~~plvh~itn~v~~~~~an~~la~gasp~M~~~~-----------------------~e~~~~~~~~dalvi 62 (265)
T 1v8a_A 6 EALKRVRERRPLVHNITNFVVMNTTANALLALGASPVMAHAE-----------------------EELEEMIRLADAVVI 62 (265)
T ss_dssp HHHHHHHHHCCEEEEECCTTTHHHHHHHHHHHTCEEEECCCT-----------------------TTHHHHHHHCSEEEE
T ss_pred HHHHHHHhcCCeEEEEccceeecchHHHHHhcCCCccccCCH-----------------------HHHHHHHHHCCEEEE
Confidence 456777888899999998654432 2223333444321 356667788999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHHHHhccccc---CCC-
Q 016016 179 GPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKVLN---CEV- 250 (396)
Q Consensus 179 G~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a~L~g~~~~---~~~- 250 (396)
|+|++ +.+..+.+..+++.+++.++|+|||||++..+..+. ++++.. ++|||||.+|+++|+|.... ++.
T Consensus 63 ~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~-~~vITPN~~E~~~L~g~~~~~~gvd~~ 140 (265)
T 1v8a_A 63 NIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRG-VDVLKGNFGEISALLGEEGKTRGVDSL 140 (265)
T ss_dssp ECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHC-CSEEEEEHHHHHHHHHHHC--------
T ss_pred EECCC-CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhC-CcEEcCCHHHHHHHhCCcccccCcCcc
Confidence 99999 666667777777777778999999999987765543 233323 89999999999999987521 111
Q ss_pred -CC-CcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCC--CCCCchHHHHHHHHHHHhccCC
Q 016016 251 -ND-RDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR--RCGGQGDILSGSVAVFLSWARA 318 (396)
Q Consensus 251 -~~-~d~~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~--~t~GTGDvLAGiIAa~LA~g~~ 318 (396)
+. +++.+.+++|++++++ +|++||..|+|+++++++.+ ++|++. +++||||+|+|+|++|+++|.+
T Consensus 141 ~~~~~~~~~aa~~la~~~~~-~VvlkG~~d~i~~~~~~~~~-~~g~~~~~~~~GtGD~Lsg~iaa~lA~g~~ 210 (265)
T 1v8a_A 141 EYGEEEAKKLTMNAAREFNT-TVAVTGAVDYVSDGRRTFAV-YNGHELLGRVTGTGCMVAALTGAFVAVTEP 210 (265)
T ss_dssp --CHHHHHHHHHHHHHHTTS-EEEEESSSEEEECSSCEEEE-CCCCGGGGGSTTHHHHHHHHHHHHHTTSCH
T ss_pred cccHHHHHHHHHHHHHHhCc-EEEEcCCCcEEEcCCEEEEE-cCCCcCcCCccChhHHHHHHHHHHHhcCCC
Confidence 12 4678899999999887 57789999999998877655 567765 6999999999999999999984
No 10
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.5e-26 Score=238.50 Aligned_cols=226 Identities=16% Similarity=0.172 Sum_probs=156.9
Q ss_pred CCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhc----CCCEEEEEecCcchhh--hcccCCceeeecccccccccCCCc
Q 016016 78 PSKHKGQAGKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPV--IKSYSPELIVHPILEESYNISGLE 151 (396)
Q Consensus 78 ~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~----GaglVtv~t~~~~~~~--i~~~~PE~~~~~~~~~~~~~~~~~ 151 (396)
..++|+++|+||+|+|||+++||+++||+.++.+ |+..+|+.|.|+...+ +... |+.++.
T Consensus 15 ~~~~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~~~~~~-p~~~v~------------- 80 (550)
T 3rm5_A 15 TLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSINNT-PKEVVF------------- 80 (550)
T ss_dssp GGGTTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEEEEEEC-CHHHHH-------------
T ss_pred ccccCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcceEEEC-CHHHHH-------------
Confidence 5679999999999999999999999999866544 4467777777765433 1111 222221
Q ss_pred hhhhhhcchhHHHHHHHHhc--cCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcc-----cccccc-hhhh
Q 016016 152 DEERRCISSKILAEVDKWME--RFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGL-----FLVTNS-IDLV 223 (396)
Q Consensus 152 ~~~~~~is~~~~~ev~~~~~--~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl-----~ll~~~-~~ll 223 (396)
++++.++. ++|++++|++ +.++++.+.++++.+++.+.|+|+||+.. .++... .+.+
T Consensus 81 ------------~ql~~~~~d~~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l 145 (550)
T 3rm5_A 81 ------------QTLESNLKDMKCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLI 145 (550)
T ss_dssp ------------HHHHHHHHHBCCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHH
T ss_pred ------------HHHHHHHhCCCCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHH
Confidence 23444443 7899999664 78888999999987766688999999753 233221 1222
Q ss_pred c-C-CC-CeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCce------------EEE--cCCeE
Q 016016 224 S-G-YP-LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSD------------LIS--DGEIA 286 (396)
Q Consensus 224 ~-~-~~-~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~d------------vI~--d~~~~ 286 (396)
+ . ++ ++|||||..|++.|+|..... .+.+++.+++++|+++.++..|++||++. +++ +++..
T Consensus 146 ~~~Ll~~a~iitPN~~Ea~~L~g~~~~i-~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~ 224 (550)
T 3rm5_A 146 TEKVAPFADILTPNIPECYKLLGEERKV-NGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKF 224 (550)
T ss_dssp HHHTGGGCSEECCBHHHHHHHHSCCCCC-CSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEE
T ss_pred HHHhhCcceEEecCHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeE
Confidence 2 2 33 699999999999999864111 12357888999999877633567798652 566 55666
Q ss_pred EEEeccCCC-CCCCCchHHHHHHHHHHHhccCChHHHHH-H-HhhhhhhH
Q 016016 287 KSVSIYGSP-RRCGGQGDILSGSVAVFLSWARAKGKATT-R-LYYNLSFK 333 (396)
Q Consensus 287 ~~i~~~G~~-~~t~GTGDvLAGiIAa~LA~g~~l~~A~~-~-~y~~~~~~ 333 (396)
+.+.....+ .+++||||+|+|+|++++++|.++++|+. + .|++....
T Consensus 225 ~~~~~~~v~~~~t~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 225 IIFKGNFVNTTHTHGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp EEEEEECCCCSCCBTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcCCCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 556533333 37999999999999999999999998877 3 36665433
No 11
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.92 E-value=1.6e-24 Score=208.79 Aligned_cols=196 Identities=19% Similarity=0.193 Sum_probs=141.7
Q ss_pred HHHHHHhhcCCCEEEEEecCcc-----hhhhcccCCceeeecccccccccCCCchhhhhhcchhHHHHHHHHhccCCEEE
Q 016016 103 FAAISALKIGADLSHVFCTKDA-----APVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLV 177 (396)
Q Consensus 103 lAalaAlr~GaglVtv~t~~~~-----~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dalv 177 (396)
...+.++|.+.++|++.|..-+ +..+.......|.... +++.++++.+|+++
T Consensus 7 ~~~~~~~r~~~plv~~itn~v~~~~~an~~l~~Ga~p~m~~~~-----------------------~e~~~~~~~a~~lv 63 (272)
T 1ekq_A 7 AKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAK-----------------------EEVADMAKIAGALV 63 (272)
T ss_dssp HHHHHHHHHHCCEEEEECCTTTHHHHHHHHHHHTCEEECCCCT-----------------------TTHHHHHHHSSEEE
T ss_pred HHHHHHHHhcCCEEEEecccchhhhhHHHHHHcCCchhhcCCH-----------------------HHHHHHHHhCCEEE
Confidence 3457899999999999998632 2223222222443221 23455567899999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHHHHhccc-cc---CC
Q 016016 178 VGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKV-LN---CE 249 (396)
Q Consensus 178 IG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a~L~g~~-~~---~~ 249 (396)
||+|++ +.+..+.+.++++.+++.++|+||||++......+. ++++...++|||||.+|+++|+|.. .. ++
T Consensus 64 i~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~~~~~~~gvd 142 (272)
T 1ekq_A 64 LNIGTL-SKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVD 142 (272)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC----------
T ss_pred EECCCC-CHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhCCCcccccCcc
Confidence 999996 566678888888888888999999999986554332 3444235789999999999999864 21 11
Q ss_pred --CCCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeccCCCC--CCCCchHHHHHHHHHHHhccCChHHHHH
Q 016016 250 --VNDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR--RCGGQGDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 250 --~~~~d~~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~~G~~~--~t~GTGDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
.+.++..+++++|++++++ +|++||..|+++++++++.+ +.+++. .++|+||+|+|+|++++++|.++.+|+.
T Consensus 143 ~~~~~~~~~~aa~~l~~~~~~-vVv~~G~~~~i~~~~~~~~~-~~~~~~~~~ttGaGD~lag~iaa~la~g~~~~~A~~ 219 (272)
T 1ekq_A 143 AGEGGGDIIRLAQQAAQKLNT-VIAITGEVDVIADTSHVYTL-HNGHKLLTKVTGAGCLLTSVVGAFCAVEENPLFAAI 219 (272)
T ss_dssp -----HHHHHHHHHHHHHHTS-EEEECSSSEEEECSSCEEEE-CCCCGGGGGSTTHHHHHHHHHHHHHTTCSSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCC-EEEEECCCCEEEeCCEEEEE-cCCCccccCccCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 1234678899999998887 56789999999988777666 456655 4999999999999999999998766644
No 12
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.89 E-value=5.1e-22 Score=189.13 Aligned_cols=210 Identities=20% Similarity=0.209 Sum_probs=141.8
Q ss_pred CeEEEEecCCCCCCcHHHHHHHHhhc----CCCEEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcchh
Q 016016 86 GKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSK 161 (396)
Q Consensus 86 G~vlvIgGSd~~~GA~ilAalaAlr~----GaglVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~ 161 (396)
.++++|+|||+|+||++++++++++. |++++|+.++++.... ..+++...+ +.+-.+
T Consensus 4 ~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~---~~~~~~~~~----------------~~~~~~ 64 (271)
T 2i5b_A 4 HKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNS---WNHQVFPID----------------TDTIRA 64 (271)
T ss_dssp CEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTT---TEEEEEECC----------------HHHHHH
T ss_pred CEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCC---ceeEEEeCC----------------HHHHHH
Confidence 48999999999999999999999988 8899999998765431 123332211 011112
Q ss_pred HHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCC-CEEEecCcc-----cccccc-hhhhc-C-CC-Ceee
Q 016016 162 ILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNV-PIVIDGDGL-----FLVTNS-IDLVS-G-YP-LAVL 231 (396)
Q Consensus 162 ~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~-PvVLDpdgl-----~ll~~~-~~ll~-~-~~-~~VI 231 (396)
.++.+.+.+ .+|++++|+ ++ +.+..+. +++.+++.+. |+|+||+.. .++... .+.++ + ++ .+||
T Consensus 65 ~~~~l~~~~-~~d~v~~G~-l~-~~~~~~~---~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~dil 138 (271)
T 2i5b_A 65 QLATITDGI-GVDAMKTGM-LP-TVDIIEL---AAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVI 138 (271)
T ss_dssp HHHHHHHHS-CCSEEEECC-CC-SHHHHHH---HHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEE
T ss_pred HHHHHHhCC-CCCEEEECC-CC-CHHHHHH---HHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEE
Confidence 223333322 689999976 54 4444444 4444455677 799998632 222211 01222 2 23 5899
Q ss_pred cCCHHHHHHHhccc-ccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc--------eEEEcCCeEEEEeccCCCC-CCCCc
Q 016016 232 TPNVNEYKRLVQKV-LNCEVNDRDAPELLQSLAKQIGGVTILQKGKS--------DLISDGEIAKSVSIYGSPR-RCGGQ 301 (396)
Q Consensus 232 TPN~~E~a~L~g~~-~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~--------dvI~d~~~~~~i~~~G~~~-~t~GT 301 (396)
|||..|+++|+|.. . .+.++..+.++++.+ ++...|++||++ +++++++..+.+.....+. .++|+
T Consensus 139 tpN~~E~~~L~g~~~~---~~~~~~~~~a~~l~~-~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~Ga 214 (271)
T 2i5b_A 139 TPNLFEASQLSGMDEL---KTVDDMIEAAKKIHA-LGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGA 214 (271)
T ss_dssp CCBHHHHHHHHTCCCC---CSHHHHHHHHHHHHT-TTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTH
T ss_pred cCCHHHHHHHhCCCCC---CCHHHHHHHHHHHHH-hCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCCh
Confidence 99999999999864 1 122466778888876 555678889876 5787776666665434343 69999
Q ss_pred hHHHHHHHHHHHhccCChHHHHH
Q 016016 302 GDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 302 GDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
||+|+|.+++++++|.++++|+.
T Consensus 215 GD~f~a~~~~~l~~g~~~~~A~~ 237 (271)
T 2i5b_A 215 GCTFSAAVTAELAKGAEVKEAIY 237 (271)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999887766
No 13
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.87 E-value=7.1e-22 Score=186.61 Aligned_cols=204 Identities=22% Similarity=0.306 Sum_probs=136.5
Q ss_pred CeEEEEecCCCCCCcHHHHHHHHhhc----CCCEEEEEecCcchhh--hcccCCceeeecccccccccCCCchhhhhhcc
Q 016016 86 GKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPV--IKSYSPELIVHPILEESYNISGLEDEERRCIS 159 (396)
Q Consensus 86 G~vlvIgGSd~~~GA~ilAalaAlr~----GaglVtv~t~~~~~~~--i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is 159 (396)
+++++|+|||+|+||++++++++++. |++++|+.++++...+ +....||.+
T Consensus 2 ~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~~~~~~~~~~~----------------------- 58 (258)
T 1ub0_A 2 RVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRVHLLPPEVV----------------------- 58 (258)
T ss_dssp CEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEEEECCHHHH-----------------------
T ss_pred CEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCceeEEEeCCHHHH-----------------------
Confidence 58999999999999999999998888 8999999998765332 111122221
Q ss_pred hhHHHHHHHHhc--cCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCC-CCEEEecC-----cccccccc-hhhh-cC-CC-
Q 016016 160 SKILAEVDKWME--RFDCLVVGPGLGRDPYLLECVSEIMKHARQSN-VPIVIDGD-----GLFLVTNS-IDLV-SG-YP- 227 (396)
Q Consensus 160 ~~~~~ev~~~~~--~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~-~PvVLDpd-----gl~ll~~~-~~ll-~~-~~- 227 (396)
. ++++.+++ +++++++|+ + .+.+..+.+. +.+++.+ +|+|+||+ +..+.... .+.+ .+ ++
T Consensus 59 ~---~~~~~~~~~~~~~~v~~G~-l-~~~~~~~~~~---~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~ 130 (258)
T 1ub0_A 59 Y---AQIESVAQDFPLHAAKTGA-L-GDAAIVEAVA---EAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPL 130 (258)
T ss_dssp H---HHHHHHHHHSCCSEEEECC-C-CSHHHHHHHH---HHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGG
T ss_pred H---HHHHHHHcCCCCCEEEECC-c-CCHHHHHHHH---HHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhccc
Confidence 1 22333333 478888876 4 3555444444 4445566 89999994 43333311 0122 11 23
Q ss_pred CeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc-------eEEEcCCeEEEEeccCCCC-CCC
Q 016016 228 LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS-------DLISDGEIAKSVSIYGSPR-RCG 299 (396)
Q Consensus 228 ~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~-------dvI~d~~~~~~i~~~G~~~-~t~ 299 (396)
.+|||||..|++.|+|.+. .+.++..+.+++|.+ +++..|++|++. ++++++++.+.+.....+. .++
T Consensus 131 ~dil~pN~~E~~~L~g~~~---~~~~~~~~~a~~l~~-~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~ 206 (258)
T 1ub0_A 131 ADLVTPNRLEAEALLGRPI---RTLKEAEEAAKALLA-LGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTH 206 (258)
T ss_dssp CSEECCBHHHHHHHHCSCC---CSHHHHHHHHHHHHT-TSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCT
T ss_pred CeEEeCCHHHHHHHhCCCC---CCHHHHHHHHHHHHH-cCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCC
Confidence 5899999999999998642 122456778888876 666556778653 5777777666665333333 699
Q ss_pred CchHHHHHHHHHHHhccCChHHHHH
Q 016016 300 GQGDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 300 GTGDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
|+||+|+|.+++.+++|.++++|+.
T Consensus 207 GaGD~f~a~~~~~l~~g~~~~~a~~ 231 (258)
T 1ub0_A 207 GTGCTLSAAIAALLAKGRPLAEAVA 231 (258)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999999999999887766
No 14
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.86 E-value=2.2e-21 Score=187.82 Aligned_cols=206 Identities=15% Similarity=0.141 Sum_probs=144.5
Q ss_pred CeEEEEecCCCCCCcHHHHHHHHhhc----CCCEEEEEecCcchhh--hcccCC-ceeeecccccccccCCCchhhhhhc
Q 016016 86 GKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPV--IKSYSP-ELIVHPILEESYNISGLEDEERRCI 158 (396)
Q Consensus 86 G~vlvIgGSd~~~GA~ilAalaAlr~----GaglVtv~t~~~~~~~--i~~~~P-E~~~~~~~~~~~~~~~~~~~~~~~i 158 (396)
.+||+|+|+++++||+++|++..+.. |+.++|+.|.|++..+ +....+ +.+
T Consensus 4 ~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~~~~---------------------- 61 (282)
T 3h74_A 4 STMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLSTWL---------------------- 61 (282)
T ss_dssp EEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCTTTH----------------------
T ss_pred CeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecChHHH----------------------
Confidence 58999999999999999999866555 6789999999887543 111111 111
Q ss_pred chhHHHHHHHHh---ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc---cc---ccc-hhhhcC-CC
Q 016016 159 SSKILAEVDKWM---ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF---LV---TNS-IDLVSG-YP 227 (396)
Q Consensus 159 s~~~~~ev~~~~---~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~---ll---~~~-~~ll~~-~~ 227 (396)
.++++.|. -.+|++++| +..+.+.++.+.++++.. .++|+|+||+... +. ... .+.+++ ++
T Consensus 62 ----~~~~~~~~~~d~~~daik~G--~l~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~ 133 (282)
T 3h74_A 62 ----PQVFAHWTRAQLHFDQALIG--YVGSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQ 133 (282)
T ss_dssp ----HHHHHHHHHTTCCCSEEEEC--CCCSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGG
T ss_pred ----HHHHHHHHHcCCccCEEEEC--CCCCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhc
Confidence 12333332 268898885 556888888888888754 4679999997442 11 111 112222 33
Q ss_pred -CeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCC-eEEEEcCCc-----e-EEEc-CCeEEEEeccCCCCCC
Q 016016 228 -LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGG-VTILQKGKS-----D-LISD-GEIAKSVSIYGSPRRC 298 (396)
Q Consensus 228 -~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~-vvVllKG~~-----d-vI~d-~~~~~~i~~~G~~~~t 298 (396)
.+|||||..|++.|+|.+. .+.++..+++++|.+++++ ..|++||.+ + ++++ ++..+.+.....+..+
T Consensus 134 ~adiitpN~~Ea~~L~g~~~---~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~~dt 210 (282)
T 3h74_A 134 QADVILPNTTEAALLTGAPY---QVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLPGHY 210 (282)
T ss_dssp GCSEECCCHHHHHHHHTCCC---CSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCSSCC
T ss_pred cCCEECCCHHHHHHHhCCCC---CCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCCCCC
Confidence 6999999999999998753 1335788899999875777 678889853 3 4553 5555555422234579
Q ss_pred CCchHHHHHHHHHHHhccCChHHHHH
Q 016016 299 GGQGDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 299 ~GTGDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
+|+||+|+|.+++++++|.++++|+.
T Consensus 211 ~GaGD~fsaai~a~l~~g~~l~~A~~ 236 (282)
T 3h74_A 211 NGTGDTLAAVIAGLLGRGYPLAPTLA 236 (282)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 99999999999999999999887766
No 15
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.86 E-value=3.4e-21 Score=187.09 Aligned_cols=213 Identities=19% Similarity=0.198 Sum_probs=143.9
Q ss_pred CeEEEEecCCCCCCcHHHHHHHHhhc----CCCEEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcchh
Q 016016 86 GKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSK 161 (396)
Q Consensus 86 G~vlvIgGSd~~~GA~ilAalaAlr~----GaglVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~ 161 (396)
++||+|+|+++++||+++|++.++.. ++.++|+.+.|++ .+ ....+..+ . ++
T Consensus 8 ~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~t-g~-~~~~~~~~----~------------------~~ 63 (291)
T 3mbh_A 8 KKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHT-QY-PGFSFLDL----T------------------DE 63 (291)
T ss_dssp CEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECT-TS-SCCCEEEC----T------------------TT
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCC-CC-CCeeecCc----H------------------HH
Confidence 68999999999999999999866554 5688888888876 42 11111111 0 00
Q ss_pred HHHHHHHHh---ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc---ccc---cc-hhhhcC-CC-Ce
Q 016016 162 ILAEVDKWM---ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF---LVT---NS-IDLVSG-YP-LA 229 (396)
Q Consensus 162 ~~~ev~~~~---~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~---ll~---~~-~~ll~~-~~-~~ 229 (396)
....++.|. -.+|++++ |+..+.+.++.+.++++.+++.++|+|+||+... +.. .. .+.+++ ++ .+
T Consensus 64 ~~~~~~~~~~~d~~~~aik~--G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~ad 141 (291)
T 3mbh_A 64 MPKIIAEWKKLEVQFDAIYT--GYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKAD 141 (291)
T ss_dssp HHHHHHHHHHTTCCCSEEEE--CCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCS
T ss_pred HHHHHHHHHhcCCccCEEEE--CCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCC
Confidence 112233332 26888888 5566777788999999887667889999998543 221 11 011222 33 69
Q ss_pred eecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc---------eEEEcC--CeEEEEeccCCCCCC
Q 016016 230 VLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS---------DLISDG--EIAKSVSIYGSPRRC 298 (396)
Q Consensus 230 VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~---------dvI~d~--~~~~~i~~~G~~~~t 298 (396)
|||||..|++.|+|.+.....+.++..+++++|.+ +++..|++||.+ .+++++ +..+.+.....+..+
T Consensus 142 iitpN~~Ea~~L~g~~~~~~~~~~~~~~aa~~L~~-~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~dt 220 (291)
T 3mbh_A 142 VITPNLTELFYLLDEPYKADSTDEELKEYLRLLSD-KGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLPAHY 220 (291)
T ss_dssp EECCBHHHHHHHHTCCCCSCCCHHHHHHHHHHHHH-TSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCGGGS
T ss_pred EEeCCHHHHHHHhCCCCCCCCCHHHHHHHHHHHHh-hCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccCCCC
Confidence 99999999999998752100123467788888876 566678889754 255554 344445322223369
Q ss_pred CCchHHHHHHHHHHHhccCChHHHHHH
Q 016016 299 GGQGDILSGSVAVFLSWARAKGKATTR 325 (396)
Q Consensus 299 ~GTGDvLAGiIAa~LA~g~~l~~A~~~ 325 (396)
+|+||+|+|.+++++++|.++++|+..
T Consensus 221 ~GaGD~f~aai~a~l~~g~~l~~A~~~ 247 (291)
T 3mbh_A 221 PGTGDTFTSVITGSLMQGDSLPMALDR 247 (291)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 999999999999999999999988773
No 16
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.83 E-value=1.1e-19 Score=175.39 Aligned_cols=207 Identities=21% Similarity=0.283 Sum_probs=135.8
Q ss_pred CCeEEEEecCCCCCCcHHHHHHHHhh----cCCCEEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcch
Q 016016 85 AGKIAVIGGCREYTGAPYFAAISALK----IGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISS 160 (396)
Q Consensus 85 ~G~vlvIgGSd~~~GA~ilAalaAlr----~GaglVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~ 160 (396)
.+++++|+|+|.++||+++++..+++ .|++++|+.+.++...+ ++.. .+. +.+..
T Consensus 25 ~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~-----~~~~--~~~--------------~~~~~ 83 (288)
T 1jxh_A 25 RINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGV-----QSVY--RIE--------------PDFVA 83 (288)
T ss_dssp CCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEE-----EEEE--ECC--------------HHHHH
T ss_pred CCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCe-----eeee--eCC--------------HHHHH
Confidence 46899999999999999999998887 58899999987654221 1111 110 01101
Q ss_pred hHHHHHHHHhc--cCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCC-EEEecCcc-----cccccc-hhhhc-C-CC-C
Q 016016 161 KILAEVDKWME--RFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVP-IVIDGDGL-----FLVTNS-IDLVS-G-YP-L 228 (396)
Q Consensus 161 ~~~~ev~~~~~--~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~P-vVLDpdgl-----~ll~~~-~~ll~-~-~~-~ 228 (396)
++++.+++ .+|++++|+ ++ +.+. +..+++.+++.+++ +|+||+.. .+.... .+.++ . ++ .
T Consensus 84 ---~~~~~l~~~~~~~~v~~G~-l~-~~~~---~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~ 155 (288)
T 1jxh_A 84 ---AQLDSVFSDVRIDTTKIGM-LA-ETDI---VEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQV 155 (288)
T ss_dssp ---HHHHHHHTTSCCSEEEECC-CC-SHHH---HHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGC
T ss_pred ---HHHHHHHhCCCCCEEEECC-CC-CHHH---HHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhC
Confidence 23444444 378999875 43 5444 34444555566775 99998643 233211 01122 1 23 5
Q ss_pred eeecCCHHHHHHHhcc-cccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc-------eEEEcCCeEEEEeccCCCC-CCC
Q 016016 229 AVLTPNVNEYKRLVQK-VLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS-------DLISDGEIAKSVSIYGSPR-RCG 299 (396)
Q Consensus 229 ~VITPN~~E~a~L~g~-~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~-------dvI~d~~~~~~i~~~G~~~-~t~ 299 (396)
+|||||..|++.|+|. .. .+.++..+++++|.+ +++..|++|++. ++++++++.+.+.....+. .++
T Consensus 156 dil~pN~~Ea~~L~g~~~~---~~~~~~~~~a~~l~~-~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdtt 231 (288)
T 1jxh_A 156 SLITPNLPEAAALLDAPHA---RTEQEMLAQGRALLA-MGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTH 231 (288)
T ss_dssp SEEECBHHHHHHHHTCCCC---CSHHHHHHHHHHHHH-TTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCB
T ss_pred cEEcCCHHHHHHHcCCCCC---CCHHHHHHHHHHHHH-hCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCC
Confidence 8999999999999986 31 122466778888886 556678889875 7888777665554323332 699
Q ss_pred CchHHHHHHHHHHHhccCChHHHHH
Q 016016 300 GQGDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 300 GTGDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
|+||+|+|.+++++++|.++++|+.
T Consensus 232 GAGD~f~a~~~a~l~~g~~~~~A~~ 256 (288)
T 1jxh_A 232 GTGCTLSAALAALRPRHRSWGETVN 256 (288)
T ss_dssp THHHHHHHHHHHHGGGSSSHHHHHH
T ss_pred CchHHHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999999999999887766
No 17
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.81 E-value=8.8e-19 Score=169.50 Aligned_cols=209 Identities=19% Similarity=0.165 Sum_probs=139.6
Q ss_pred CeEEEEecCCCCCCcHHHHHHHHhhc-CCC---EEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcchh
Q 016016 86 GKIAVIGGCREYTGAPYFAAISALKI-GAD---LSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSK 161 (396)
Q Consensus 86 G~vlvIgGSd~~~GA~ilAalaAlr~-Gag---lVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~ 161 (396)
.+||+|+|+++++||++.|++..+.. |+. +.|+.+.+.+. . ++.... .++.+
T Consensus 5 ~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t~--~----~~~~g~------------------~~~~~ 60 (289)
T 3pzs_A 5 KNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQ--Y----GHWTGC------------------VMPAS 60 (289)
T ss_dssp CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCGG--G----SCCCEE------------------ECCHH
T ss_pred CeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCCC--C----CCcccc------------------cCCHH
Confidence 58999999999999999999877665 654 44444443321 1 111111 12222
Q ss_pred HHH----HHHHH--hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCC--CCEEEecCccc-----ccccc-hhhhc-C-
Q 016016 162 ILA----EVDKW--MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSN--VPIVIDGDGLF-----LVTNS-IDLVS-G- 225 (396)
Q Consensus 162 ~~~----ev~~~--~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~--~PvVLDpdgl~-----ll~~~-~~ll~-~- 225 (396)
.++ .+.++ +.++|++++| +..+.+..+.+.++++.+++.+ +++|+||+... ++... .+.++ .
T Consensus 61 ~~~~~~~~~~~~~~l~~~d~v~~G--~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~l 138 (289)
T 3pzs_A 61 HLTDIVQGIADIDRLKDCDAVLSG--YIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEA 138 (289)
T ss_dssp HHHHHHHHHHHTTCGGGCCEEEEC--CCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTH
T ss_pred HHHHHHHHHHhcCCccCCCEEEEC--CCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHh
Confidence 222 23332 2488998775 4557788889999988876544 78999996332 22211 12222 1
Q ss_pred C-CCeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc-e---------EEEcCCeEEEEe-ccC
Q 016016 226 Y-PLAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS-D---------LISDGEIAKSVS-IYG 293 (396)
Q Consensus 226 ~-~~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~-d---------vI~d~~~~~~i~-~~G 293 (396)
. .++|||||..|++.|+|.+. .+.++..+++++|.+ .++..|++||.+ + ++.++++.+.+. +..
T Consensus 139 l~~~diitpN~~E~~~L~g~~~---~~~~~~~~aa~~l~~-~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 214 (289)
T 3pzs_A 139 LPASDMIAPNLLELEQLSGERV---ENVEQAVQVARSLCA-RGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLV 214 (289)
T ss_dssp HHHCSEECCCHHHHHHHHTSCC---CSHHHHHHHHHHHHT-TSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECC
T ss_pred hccCCEEeCCHHHHHHHhCCCC---CCHHHHHHHHHHHHH-HCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeee
Confidence 2 36999999999999998752 123567778888875 566678889743 2 666777666554 222
Q ss_pred CC--CCCCCchHHHHHHHHHHHhccCChHHHHH
Q 016016 294 SP--RRCGGQGDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 294 ~~--~~t~GTGDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
.. ..++|+||+|+|.+++++++|.++++|+.
T Consensus 215 ~~~v~dt~GaGD~f~a~~~~~l~~g~~~~~A~~ 247 (289)
T 3pzs_A 215 DFGKRQPVGVGDLTSGLLLVNLLKGEPLDKALE 247 (289)
T ss_dssp CCTTSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 22 45999999999999999999999988877
No 18
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.77 E-value=1.3e-17 Score=162.64 Aligned_cols=210 Identities=14% Similarity=0.121 Sum_probs=138.3
Q ss_pred CCeEEEEecCCCCCCcHHHHHHHHhhc-CCCEEEEEecC--cchhhhcccCCceeeecccccccccCCCchhhhhhcchh
Q 016016 85 AGKIAVIGGCREYTGAPYFAAISALKI-GADLSHVFCTK--DAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSK 161 (396)
Q Consensus 85 ~G~vlvIgGSd~~~GA~ilAalaAlr~-GaglVtv~t~~--~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~ 161 (396)
.++||+|.|++.++|+++.|++-.+.. |+...++.|.+ +... + +...- +.++.+
T Consensus 3 ~~~VLsI~~~~~~G~~G~~aa~~~l~~~G~~v~~~~T~~~Snhtg-~----~~~~g------------------~~~~~~ 59 (300)
T 3zs7_A 3 EKTVLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLSNHSG-Y----PVIRG------------------HRMSLQ 59 (300)
T ss_dssp CCEEEEEEEEESSSSCHHHHHHHHHHHTTCEEEEEEEEEESSCTT-S----SCCCE------------------EECCHH
T ss_pred CCeEEEEeCccCCCcchHHHHHHHHHHcCCeeEEeeeEEecCCCC-C----CCcCC------------------CcCCHH
Confidence 468999999999999999999877776 88888777776 3222 1 11111 112222
Q ss_pred HHHHH-HHHh-----ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCC------CCEEEecCccc---ccccc--hhhhc
Q 016016 162 ILAEV-DKWM-----ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSN------VPIVIDGDGLF---LVTNS--IDLVS 224 (396)
Q Consensus 162 ~~~ev-~~~~-----~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~------~PvVLDpdgl~---ll~~~--~~ll~ 224 (396)
.++.+ +.|- ..+|++++ |+..+.+.++.+.++++.+++.+ .++|+||+... ++... .+.++
T Consensus 60 ql~~~~~~~~~~~~~~~~daV~t--G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~ 137 (300)
T 3zs7_A 60 EYDELMEGVRANNFLSNYRYILT--GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYR 137 (300)
T ss_dssp HHHHHHHHHHHTTCGGGCSEEEE--CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHH
T ss_pred HHHHHHHHHHhcCCcccCCEEEE--CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHH
Confidence 33332 2221 36898888 56668888999999888775443 78999996332 22211 12222
Q ss_pred C-CC-CeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCce--------EEEc-C------CeEE
Q 016016 225 G-YP-LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSD--------LISD-G------EIAK 287 (396)
Q Consensus 225 ~-~~-~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~d--------vI~d-~------~~~~ 287 (396)
+ ++ .+|||||..|++.|+|.+. .+.++..+++++|.+ .|+..|++||.+. ++.. . +..+
T Consensus 138 ~Ll~~adiitPN~~Ea~~L~g~~~---~~~~~~~~aa~~L~~-~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~ 213 (300)
T 3zs7_A 138 ELVPLADIVTPNYFEASLLSGVTV---NDLSSAILAADWFHN-CGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRF 213 (300)
T ss_dssp HHGGGCSEECCCHHHHHHHHSSCC---CSHHHHHHHHHHHHH-HTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEE
T ss_pred HHhhhCCEecCCHHHHHHHhCCCC---CCHHHHHHHHHHHHH-hCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEE
Confidence 2 23 6999999999999999752 123567788888876 4667788887541 3332 2 3444
Q ss_pred EEeccCCCCCCCCchHHHHHHHHHHHhccCChHHHHH
Q 016016 288 SVSIYGSPRRCGGQGDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 288 ~i~~~G~~~~t~GTGDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
.+...-.+..++||||+|++.+++.+ .|.++++|+.
T Consensus 214 ~~~~~~v~~~~~GtGD~fsaal~a~l-~g~~~~~Av~ 249 (300)
T 3zs7_A 214 SGVVPYHEGRYTGTGDVFAACLLAFS-HSHPMDVAIG 249 (300)
T ss_dssp EEEEECCSSCBTTHHHHHHHHHHHHH-TTSCHHHHHH
T ss_pred EEEeccCCCCCcCHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 44321122258999999999999999 8999888877
No 19
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.69 E-value=9.7e-16 Score=146.68 Aligned_cols=212 Identities=17% Similarity=0.149 Sum_probs=135.9
Q ss_pred CeEEEEecCCCCCCcHHHHHHHHhhc-CCCEEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcchhHHH
Q 016016 86 GKIAVIGGCREYTGAPYFAAISALKI-GADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILA 164 (396)
Q Consensus 86 G~vlvIgGSd~~~GA~ilAalaAlr~-GaglVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ 164 (396)
+++|.|+|++.++|++..+++.+++. |.....+.|. ++ ...++...... ..++.+.++
T Consensus 16 ~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~-----i~-~~~~g~~~~~g---------------~~~~~~~~~ 74 (283)
T 2ddm_A 16 ADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTV-----LL-SNTPHYDTFYG---------------GAIPDEWFS 74 (283)
T ss_dssp CSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEE-----EE-SSCTTSSCCCE---------------EECCHHHHH
T ss_pred CeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEE-----Ee-ccCCCcCceee---------------eeCCHHHHH
Confidence 68999999999999999999999887 7655544432 11 01111110000 012222222
Q ss_pred ----HHHH--HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhc--CCCCEEEecCccc-----ccccc-h-hhhcC-CC-
Q 016016 165 ----EVDK--WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQ--SNVPIVIDGDGLF-----LVTNS-I-DLVSG-YP- 227 (396)
Q Consensus 165 ----ev~~--~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~--~~~PvVLDpdgl~-----ll~~~-~-~ll~~-~~- 227 (396)
.+.+ +++.++++++|+ ++ ..+..+.+.++++.+++ .++|+|+||+... .+... . .+.+. ++
T Consensus 75 ~~~~~l~~~~~~~~~~~v~~G~-l~-~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~ 152 (283)
T 2ddm_A 75 GYLRALQERDALRQLRAVTTGY-MG-TASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPL 152 (283)
T ss_dssp HHHHHHHHTTCCTTCCEEEECC-CS-CHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGG
T ss_pred HHHHHHHhcCCcccCCEEEECC-cC-CHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhh
Confidence 2333 345789999965 44 44556778888888776 6889999986322 11111 1 11122 23
Q ss_pred CeeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCce---------EEEcCCeEEEEeccCCCCCC
Q 016016 228 LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSD---------LISDGEIAKSVSIYGSPRRC 298 (396)
Q Consensus 228 ~~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~d---------vI~d~~~~~~i~~~G~~~~t 298 (396)
++|||||..|+..|+|... .+.++..+.++++.+ .++..|++|++.. ++++++..+.+.....+..+
T Consensus 153 ~dil~pN~~E~~~L~g~~~---~~~~~~~~~a~~l~~-~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~vdt 228 (283)
T 2ddm_A 153 AQGITPNIFELEILTGKNC---RDLDSAIAAAKSLLS-DTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVKTDL 228 (283)
T ss_dssp CSEECCBHHHHHHHHTSCC---SSHHHHHHHHHHHCC-SSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCCCCC
T ss_pred ceEecCCHHHHHHHhCCCC---CCHHHHHHHHHHHHH-cCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeCCCC
Confidence 6899999999999998642 122456677777765 4556778887543 66666666555433333468
Q ss_pred CCchHHHHHHHHHHHhccCChHHHHH
Q 016016 299 GGQGDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 299 ~GTGDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
+|+||+|+|.+++.+++|.++++|+.
T Consensus 229 ~GAGDaf~a~~~~~l~~g~~~~~A~~ 254 (283)
T 2ddm_A 229 KGTGDLFCAQLISGLLKGKALTDAVH 254 (283)
T ss_dssp CCHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999887766
No 20
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.33 E-value=4.5e-11 Score=115.13 Aligned_cols=156 Identities=19% Similarity=0.185 Sum_probs=105.3
Q ss_pred hcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCHH
Q 016016 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVN 236 (396)
Q Consensus 157 ~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~ 236 (396)
.++.++++++.+.+..+|++++...+ .. +.+..+++.+++.++|+++||+....+. .++++ .+++||||..
T Consensus 119 ~l~~~~~~~~~~~~~~~~~v~~~~~~--~~---~~~~~~~~~a~~~g~~v~~D~~~~~~~~--~~ll~--~~dil~~N~~ 189 (309)
T 1rkd_A 119 ALSPALVEAQRERIANASALLMQLES--PL---ESVMAAAKIAHQNKTIVALNPAPARELP--DELLA--LVDIITPNET 189 (309)
T ss_dssp GCCHHHHHTTHHHHHHCSEEEECSSS--CH---HHHHHHHHHHHHTTCEEEECCCSCCCCC--HHHHT--TCSEECCCHH
T ss_pred cCCHHHHHHHHHhcccCCEEEEeCCC--CH---HHHHHHHHHHHHcCCEEEEECCccccch--HHHHh--hCCEEEcCHH
Confidence 45555555444556789999996433 22 2455566667778999999998752111 13443 4689999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEeccC-CCCCCCCchHHHHHHHHHHH
Q 016016 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIYG-SPRRCGGQGDILSGSVAVFL 313 (396)
Q Consensus 237 E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~G-~~~~t~GTGDvLAGiIAa~L 313 (396)
|+..|+|... .+.++..+.+++|.+ .++..|++| |. +.++.+++..+.+...- ....++|+||.|+|.+.+.+
T Consensus 190 E~~~l~g~~~---~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l 265 (309)
T 1rkd_A 190 EAEKLTGIRV---ENDEDAAKAAQVLHE-KGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITAL 265 (309)
T ss_dssp HHHHHHSCCC---SSHHHHHHHHHHHHH-TTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHhCCCC---CCHHHHHHHHHHHHH-hCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHH
Confidence 9999998642 122456677888876 455566777 43 34556666666553211 22369999999999999999
Q ss_pred hccCChHHHHHH
Q 016016 314 SWARAKGKATTR 325 (396)
Q Consensus 314 A~g~~l~~A~~~ 325 (396)
..|.++++|+..
T Consensus 266 ~~g~~~~~a~~~ 277 (309)
T 1rkd_A 266 LEEKPLPEAIRF 277 (309)
T ss_dssp HTTCCHHHHHHH
T ss_pred HcCCCHHHHHHH
Confidence 999999988773
No 21
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.31 E-value=3.3e-11 Score=116.04 Aligned_cols=159 Identities=18% Similarity=0.236 Sum_probs=102.4
Q ss_pred cchhHHHHHHHHh---ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCC-CeeecC
Q 016016 158 ISSKILAEVDKWM---ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYP-LAVLTP 233 (396)
Q Consensus 158 is~~~~~ev~~~~---~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~-~~VITP 233 (396)
+++++++++.+.+ ...+.+++...+... ...+.+.++++.+++.++++++||....+. +++. .. +++|+|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~v~~D~~~~~l~----~~l~-~~~~dil~~ 186 (309)
T 3umo_A 113 LNEDEFRQLEEQVLEIESGAILVISGSLPPG-VKLEKLTQLISAAQKQGIRCIVDSSGEALS----AALA-IGNIELVKP 186 (309)
T ss_dssp CCHHHHHHHHHHHTTSCTTCEEEEESCCCTT-CCHHHHHHHHHHHHHTTCEEEEECCHHHHH----HHTS-SCCBSEECC
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEEccCCCC-CCHHHHHHHHHHHHhcCCEEEEECCcHHHH----HHhc-cCCCeEEEe
Confidence 4444444443322 456778775333321 112456677777778899999999643211 2333 23 589999
Q ss_pred CHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHH
Q 016016 234 NVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVA 310 (396)
Q Consensus 234 N~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIA 310 (396)
|..|+..|+|... .+.++..+.+++|.++.....|++| |. +.++.++++.+.+... .....++|+||.|+|.+.
T Consensus 187 N~~E~~~l~g~~~---~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~ 263 (309)
T 3umo_A 187 NQKELSALVNREL---TQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMT 263 (309)
T ss_dssp BHHHHHHHHTSCC---CSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHH
T ss_pred CHHHHHHHhCCCC---CCHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHH
Confidence 9999999998652 1334677888888876431234445 43 3566676666666421 122369999999999999
Q ss_pred HHHhccCChHHHHHH
Q 016016 311 VFLSWARAKGKATTR 325 (396)
Q Consensus 311 a~LA~g~~l~~A~~~ 325 (396)
+.+.+|.++++|+..
T Consensus 264 ~~l~~g~~~~~a~~~ 278 (309)
T 3umo_A 264 LKLAENASLEEMVRF 278 (309)
T ss_dssp HHHHTTCCHHHHHHH
T ss_pred HHHHcCCCHHHHHHH
Confidence 999999999988773
No 22
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.29 E-value=1.2e-10 Score=111.63 Aligned_cols=157 Identities=14% Similarity=0.132 Sum_probs=108.0
Q ss_pred hhcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCH
Q 016016 156 RCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNV 235 (396)
Q Consensus 156 ~~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~ 235 (396)
..++++.++++.+.++.+|++++.... ..+ .+.++++.+++.++++++||....- ...++++ .+++|+||.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~~~~~~~a~~~~~~v~~D~~~~~~--~~~~ll~--~~dil~~N~ 187 (304)
T 3ry7_A 117 MTMTPEDVINAKDAIINADFVVAQLEV--PIP---AIISAFEIAKAHGVTTVLNPAPAKA--LPNELLS--LIDIIVPNE 187 (304)
T ss_dssp GGCCHHHHHTTHHHHHTCSEEEEETTS--CHH---HHHHHHHHHHHTTCEEEEECCSCCC--CCHHHHT--TCSEECCBH
T ss_pred hcCCHHHHHHHHHHhccCCEEEEcCCC--CHH---HHHHHHHHHHHcCCEEEEeCCcccc--ccHHHHH--hCCEEecCH
Confidence 356666666655667899999997533 333 4556667777789999999976421 1113443 479999999
Q ss_pred HHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHH
Q 016016 236 NEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVF 312 (396)
Q Consensus 236 ~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~ 312 (396)
.|+..|+|... .+.++..+.+++|.+ .++..|++|.+ +.++.+++..+.+... .....++|+||.|++.+.+.
T Consensus 188 ~E~~~l~g~~~---~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~ 263 (304)
T 3ry7_A 188 TEAELLSGIKV---TNEQSMKDNANYFLS-IGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSR 263 (304)
T ss_dssp HHHHHHHSCCC---CSHHHHHHHHHHHHH-TTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCC---CChhHHHHHHHHHHH-cCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHH
Confidence 99999998652 122456777888875 45556677754 3466666666666421 12236999999999988888
Q ss_pred Hhcc-CChHHHHHH
Q 016016 313 LSWA-RAKGKATTR 325 (396)
Q Consensus 313 LA~g-~~l~~A~~~ 325 (396)
+.+| .++++|+..
T Consensus 264 l~~g~~~~~~a~~~ 277 (304)
T 3ry7_A 264 LNKSQDNLADAIDF 277 (304)
T ss_dssp CCTTCTTHHHHHHH
T ss_pred HHcCCCCHHHHHHH
Confidence 9999 999888773
No 23
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.27 E-value=9.6e-11 Score=113.50 Aligned_cols=148 Identities=20% Similarity=0.248 Sum_probs=96.8
Q ss_pred hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCC--CEEEecCccc-------cc-ccc-hhhhc-C-CC-CeeecCCH
Q 016016 170 MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNV--PIVIDGDGLF-------LV-TNS-IDLVS-G-YP-LAVLTPNV 235 (396)
Q Consensus 170 ~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~--PvVLDpdgl~-------ll-~~~-~~ll~-~-~~-~~VITPN~ 235 (396)
+..+|++++| +..+.+..+.+.++++.+++.+. |+|+||+... ++ ... .+.++ . ++ .++||||.
T Consensus 74 ~~~~~~v~~G--~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~ 151 (312)
T 2yxt_A 74 MNKYDYVLTG--YTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQ 151 (312)
T ss_dssp CCCCSEEEEC--CCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCH
T ss_pred CccCCEEEEC--CCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCH
Confidence 4578998875 44466666777777777766554 5899997332 11 111 11222 1 23 58999999
Q ss_pred HHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc--------eEEE-------cC-----CeEEEEec-cCC
Q 016016 236 NEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS--------DLIS-------DG-----EIAKSVSI-YGS 294 (396)
Q Consensus 236 ~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~~--------dvI~-------d~-----~~~~~i~~-~G~ 294 (396)
.|+..|+|... .+.++..+++++|.+ +++..|++|++. +++. ++ +..+.+.. ...
T Consensus 152 ~Ea~~L~g~~~---~~~~~~~~~~~~l~~-~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (312)
T 2yxt_A 152 FEAELLSGRKI---HSQEEALRVMDMLHS-MGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVD 227 (312)
T ss_dssp HHHHHHHSCCC---CSHHHHHHHHHHHHH-HSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCS
T ss_pred HHHHHHhCCCC---CCHHHHHHHHHHHHH-cCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccC
Confidence 99999998642 122456777888876 566677888543 4554 43 14444432 222
Q ss_pred CCCCCCchHHHHHHHHHHHhc-cCChHHHHH
Q 016016 295 PRRCGGQGDILSGSVAVFLSW-ARAKGKATT 324 (396)
Q Consensus 295 ~~~t~GTGDvLAGiIAa~LA~-g~~l~~A~~ 324 (396)
. .++|+||+|+|.+++.++. |.++++|+.
T Consensus 228 v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~ 257 (312)
T 2yxt_A 228 A-VFVGTGDLFAAMLLAWTHKHPNNLKVACE 257 (312)
T ss_dssp S-CCSSHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred C-CCCCchHHHHHHHHHHHHhcCCCHHHHHH
Confidence 2 6999999999999999998 899887766
No 24
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.26 E-value=1.4e-11 Score=119.41 Aligned_cols=145 Identities=17% Similarity=0.197 Sum_probs=93.6
Q ss_pred HHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCHHHHHHHhccc
Q 016016 166 VDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNEYKRLVQKV 245 (396)
Q Consensus 166 v~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~E~a~L~g~~ 245 (396)
+.+.+..+|++++..-+... ...+.+.++++.+++.++++++||....+. +.+. ..+++|+||..|+..|+|..
T Consensus 127 ~~~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~l~----~~l~-~~~dil~~N~~E~~~l~g~~ 200 (320)
T 3ie7_A 127 IAKKVKKEDMVVIAGSPPPH-YTLSDFKELLRTVKATGAFLGCDNSGEYLN----LAVE-MGVDFIKPNEDEVIAILDEK 200 (320)
T ss_dssp HHHHCCTTCEEEEESCCCTT-CCHHHHHHHHHHHHHHTCEEEEECCHHHHH----HHHH-HCCSEECCBTTGGGGGSCTT
T ss_pred HHHHhcCCCEEEEeCCCCCC-CCHHHHHHHHHHHHhcCCEEEEECChHHHH----HHHh-cCCeEEeeCHHHHHHHhCCC
Confidence 44567789999994223211 112356667777777899999999753211 2332 14789999999999998854
Q ss_pred ccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCChHHH
Q 016016 246 LNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARAKGKA 322 (396)
Q Consensus 246 ~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~l~~A 322 (396)
. . +..+.+++++++ ...|++|.+ +.++.++++.+.+... -....++|+||.|+|.+.+.+..|.++++|
T Consensus 201 ~----~--~~~~~~~~~~~~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~~~~a 272 (320)
T 3ie7_A 201 T----N--SLEENIRTLAEK--IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITET 272 (320)
T ss_dssp C----C--CHHHHHHHHTTT--CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred c----C--CCHHHHHHHHhh--CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCCHHHH
Confidence 1 1 012334455544 334555643 3566666666666421 222369999999988888888999999888
Q ss_pred HH
Q 016016 323 TT 324 (396)
Q Consensus 323 ~~ 324 (396)
+.
T Consensus 273 ~~ 274 (320)
T 3ie7_A 273 LK 274 (320)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 25
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.26 E-value=1.1e-10 Score=112.51 Aligned_cols=146 Identities=18% Similarity=0.218 Sum_probs=95.8
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCC-eeecCCHHHHHHHhccccc
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPL-AVLTPNVNEYKRLVQKVLN 247 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~-~VITPN~~E~a~L~g~~~~ 247 (396)
.++. |++++...+... ...+.+.++++.+++.++++++||.+..+. +.+. ..+ ++|+||..|+..|+|...
T Consensus 128 ~~~~-~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~----~~l~-~~~~dil~~N~~E~~~l~g~~~- 199 (309)
T 3cqd_A 128 IESG-AILVISGSLPPG-VKLEKLTQLISAAQKQGIRCIVDSSGEALS----AALA-IGNIELVKPNQKELSALVNREL- 199 (309)
T ss_dssp SCTT-CEEEEESCCCTT-CCHHHHHHHHHHHHTTTCEEEEECCHHHHH----HHTT-TCCBSEECCBHHHHHHHHTSCC-
T ss_pred hhcC-CEEEEECCCCCC-CCHHHHHHHHHHHHHcCCeEEEECChHHHH----HHHH-hCCCEEEeeCHHHHHHHhCCCC-
Confidence 3466 998886333321 112355667777778899999999864211 2232 236 899999999999998642
Q ss_pred CCCCCCcHHHHHHHHHHhhC-CeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCChHHHH
Q 016016 248 CEVNDRDAPELLQSLAKQIG-GVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARAKGKAT 323 (396)
Q Consensus 248 ~~~~~~d~~~~a~~La~~~g-~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~l~~A~ 323 (396)
.+.++..+.+++|.+. + +..|++|.+ +.++++++..+.+... -....++|+||.|+|.+.+.+..|.++++|+
T Consensus 200 --~~~~~~~~~~~~l~~~-g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~ 276 (309)
T 3cqd_A 200 --TQPDDVRKAAQEIVNS-GKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV 276 (309)
T ss_dssp --CSTTHHHHHHHHHHHT-TSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred --CCHHHHHHHHHHHHHc-CCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCCHHHHH
Confidence 1234566778888764 4 334555643 3456666655555321 1223699999999888888888999999887
Q ss_pred HH
Q 016016 324 TR 325 (396)
Q Consensus 324 ~~ 325 (396)
..
T Consensus 277 ~~ 278 (309)
T 3cqd_A 277 RF 278 (309)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 26
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.24 E-value=4.2e-11 Score=115.05 Aligned_cols=158 Identities=16% Similarity=0.197 Sum_probs=100.6
Q ss_pred cchhHHHHHHHH---hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCC
Q 016016 158 ISSKILAEVDKW---MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPN 234 (396)
Q Consensus 158 is~~~~~ev~~~---~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN 234 (396)
+++++++.+.+. ++.+|++++...+... ...+.+..+++.+++.++|+++||++..+. ++++ ..+++||||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~----~~l~-~~~dil~~N 181 (306)
T 2jg5_A 108 ITSTQFEQLLQQIKNTTSEDIVIVAGSVPSS-IPSDAYAQIAQITAQTGAKLVVDAEKELAE----SVLP-YHPLFIKPN 181 (306)
T ss_dssp CCHHHHHHHHHHHTTCCTTCEEEEESCCCTT-SCTTHHHHHHHHHHHHCCEEEEECCHHHHH----HHGG-GCCSEECCB
T ss_pred CCHHHHHHHHHHHHhccCCCEEEEeCCCCCC-CChHHHHHHHHHHHHCCCEEEEECChHHHH----HHHh-cCCeEEecC
Confidence 444444443322 4578988875222211 001244555666666789999999864321 2333 237899999
Q ss_pred HHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEeccC-CCCCCCCchHHHHHHHHH
Q 016016 235 VNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIYG-SPRRCGGQGDILSGSVAV 311 (396)
Q Consensus 235 ~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~G-~~~~t~GTGDvLAGiIAa 311 (396)
..|+..|+|... .+.++..+.+++|.+ +++..|++| |. +.++.+++..+.+.... ....++|+||.|+|.+.+
T Consensus 182 ~~E~~~l~g~~~---~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 257 (306)
T 2jg5_A 182 KDELEVMFNTTV---NSDADVIKYGRLLVD-KGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVA 257 (306)
T ss_dssp HHHHHHHTTSCC---CSHHHHHHHHHHHHH-TTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC---CCHHHHHHHHHHHHH-cCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHH
Confidence 999999988541 122356677788875 555556677 43 45666766666664222 223699999999888888
Q ss_pred HHhccCChHHHHHH
Q 016016 312 FLSWARAKGKATTR 325 (396)
Q Consensus 312 ~LA~g~~l~~A~~~ 325 (396)
.+..|.++++|+..
T Consensus 258 ~l~~g~~~~~a~~~ 271 (306)
T 2jg5_A 258 GIASGLSIEKAFQQ 271 (306)
T ss_dssp HHHTTCCHHHHHHH
T ss_pred HHHcCCCHHHHHHH
Confidence 88999999888763
No 27
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.24 E-value=5.7e-11 Score=115.53 Aligned_cols=151 Identities=16% Similarity=0.182 Sum_probs=97.4
Q ss_pred HHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcC-CCCeeecCCHHHHHHHhccc
Q 016016 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-YPLAVLTPNVNEYKRLVQKV 245 (396)
Q Consensus 167 ~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~-~~~~VITPN~~E~a~L~g~~ 245 (396)
.+++..+|++++...+.... ..+.+.++++.+++.++|+++||++..+ .++++. ..+++|+||..|+..|+|..
T Consensus 124 ~~~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~Dp~~~~~----~~~l~~~~~~dil~~N~~E~~~l~g~~ 198 (323)
T 2f02_A 124 DQLIKQAEIVTISGSLAKGL-PSDFYQELVQKAHAQEVKVLLDTSGDSL----RQVLQGPWKPYLIKPNLEELEGLLGQD 198 (323)
T ss_dssp HHHHTTCSEEEEESCCCBTS-CTTHHHHHHHHHHHTTCEEEEECCTHHH----HHHHHSSCCCSEECCBHHHHHHHHTCC
T ss_pred HHhccCCCEEEEECCCCCCC-ChHHHHHHHHHHHHCCCEEEEECChHHH----HHHHhccCCCeEEecCHHHHHHHhCCC
Confidence 34557899999843233210 1124556666677789999999986322 134431 14689999999999999864
Q ss_pred ccCCCCC-CcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCChHH
Q 016016 246 LNCEVND-RDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARAKGK 321 (396)
Q Consensus 246 ~~~~~~~-~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~l~~ 321 (396)
.. .+. ++..+.+++|.+ .++..|++|.+ +.++.+++..+.+... .....++|+||.|+|.+.+.+..|.++++
T Consensus 199 ~~--~~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~~~~ 275 (323)
T 2f02_A 199 FS--ENPLAAVQTALTKPMF-AGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAPAAE 275 (323)
T ss_dssp CC--SSCHHHHHHHHTSGGG-TTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred CC--CCcHHHHHHHHHHHHH-cCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCCHHH
Confidence 11 022 345566676664 35556666643 3455666666555421 12236999999999888888899999998
Q ss_pred HHHH
Q 016016 322 ATTR 325 (396)
Q Consensus 322 A~~~ 325 (396)
|+..
T Consensus 276 a~~~ 279 (323)
T 2f02_A 276 LLKW 279 (323)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 28
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.22 E-value=1.1e-10 Score=113.86 Aligned_cols=155 Identities=10% Similarity=0.091 Sum_probs=102.7
Q ss_pred hcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCHH
Q 016016 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVN 236 (396)
Q Consensus 157 ~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~ 236 (396)
.++.+.++++.+.+..+|++++...+. + .+..+++ +++.++++++||..........++++ .+++|+||..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~l~~-a~~~~~~v~~D~~~~~~~~~~~~~l~--~~dil~~N~~ 191 (328)
T 3kzh_A 121 AMNTDFIDSKREIFENAEYTVLDSDNP---E---IMEYLLK-NFKDKTNFILDPVSAEKASWVKHLIK--DFHTIKPNRH 191 (328)
T ss_dssp GCCHHHHHHTHHHHHTCSEEEEESSCH---H---HHHHHHH-HHTTTSEEEEECCSHHHHHTSTTTGG--GCSEECCBHH
T ss_pred hCCHHHHHHHHHhhccCCEEEEeCCcH---H---HHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHHhc--CCcEEeCCHH
Confidence 345555555556678999999975332 3 3444555 56788999999975432111112222 3699999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEec-cCCCCCCCCchHHHHHHHHHHH
Q 016016 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSI-YGSPRRCGGQGDILSGSVAVFL 313 (396)
Q Consensus 237 E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~-~G~~~~t~GTGDvLAGiIAa~L 313 (396)
|+..|+|.+. .+.++..+.+++|.+ .++..|++|.+ +.++.+++..+.+.. .-....++|+||.|+|.+.+.+
T Consensus 192 E~~~l~g~~~---~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l 267 (328)
T 3kzh_A 192 EAEILAGFPI---TDTDDLIKASNYFLG-LGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGY 267 (328)
T ss_dssp HHHHHHTSCC---CSHHHHHHHHHHHHH-HTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC---CCHHHHHHHHHHHHH-hCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHH
Confidence 9999998642 123456677888876 45556666643 345666666555542 2223369999998888888888
Q ss_pred hccCChHHHHH
Q 016016 314 SWARAKGKATT 324 (396)
Q Consensus 314 A~g~~l~~A~~ 324 (396)
..|.++++|+.
T Consensus 268 ~~g~~~~~a~~ 278 (328)
T 3kzh_A 268 MNKMPIEDIVK 278 (328)
T ss_dssp HTTCCHHHHHH
T ss_pred HcCCCHHHHHH
Confidence 99999988876
No 29
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.21 E-value=1.4e-10 Score=110.85 Aligned_cols=152 Identities=9% Similarity=0.032 Sum_probs=102.7
Q ss_pred HHhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhc-CCCCEEEecCccc-ccccc--hhhhcCCCCeeecCCHHHHHHHh
Q 016016 168 KWMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQ-SNVPIVIDGDGLF-LVTNS--IDLVSGYPLAVLTPNVNEYKRLV 242 (396)
Q Consensus 168 ~~~~~~dalvIG~Gl~-~~~~~~~~v~~~l~~a~~-~~~PvVLDpdgl~-ll~~~--~~ll~~~~~~VITPN~~E~a~L~ 242 (396)
+.++.+|++.+|. +. ..+...+.+.++++.+++ .++++++||+... +.... .++++ .+++||||..|+..|+
T Consensus 110 ~~~~~~~~v~~g~-~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~ 186 (296)
T 2qhp_A 110 RLALNTRAVCFGS-LAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFK--RCNILKINDEELVTIS 186 (296)
T ss_dssp HHHHTEEEEEECS-GGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCCHHHHHHHHH--HCSEEEEEHHHHHHHH
T ss_pred hhhcCCCEEEECC-hHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccCHHHHHHHHH--HCCEEECCHHHHHHHh
Confidence 3456789999874 32 234445677778887766 5889999997432 11110 12332 3689999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEeccC-CCCCCCCchHHHHHHHHHHHhccCCh
Q 016016 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIYG-SPRRCGGQGDILSGSVAVFLSWARAK 319 (396)
Q Consensus 243 g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~G-~~~~t~GTGDvLAGiIAa~LA~g~~l 319 (396)
|... .+.++..+.++++.+++++..|++|.+ +.+++++++.+.+.... ....++|+||.|++.+.+.+++|.++
T Consensus 187 g~~~---~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~~ 263 (296)
T 2qhp_A 187 RMFG---YPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKSV 263 (296)
T ss_dssp HHTT---CTTSCHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCCH
T ss_pred cccC---CCCCCHHHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCCH
Confidence 8541 123466778888887666656667644 35566666666554211 22369999999999888889999999
Q ss_pred HHHHHH
Q 016016 320 GKATTR 325 (396)
Q Consensus 320 ~~A~~~ 325 (396)
++|+..
T Consensus 264 ~~a~~~ 269 (296)
T 2qhp_A 264 PEAHKL 269 (296)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988773
No 30
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.18 E-value=6.9e-11 Score=115.75 Aligned_cols=159 Identities=11% Similarity=-0.044 Sum_probs=104.5
Q ss_pred HHHhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEecCccc-cccc---c--hhhhcC-C-CCeeecCCHHH
Q 016016 167 DKWMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTN---S--IDLVSG-Y-PLAVLTPNVNE 237 (396)
Q Consensus 167 ~~~~~~~dalvIG~Gl~-~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~---~--~~ll~~-~-~~~VITPN~~E 237 (396)
.+.++.+|+++++.=+. .++...+.+.++++.+++.++++++||..-. +... . .+.+++ + ..+||+||..|
T Consensus 124 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E 203 (346)
T 3ktn_A 124 EAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRD 203 (346)
T ss_dssp HHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHH
T ss_pred HHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHH
Confidence 34568899999952111 1444456777888888888999999996321 2211 0 112221 2 36999999999
Q ss_pred HHHHhcccccC-CCCCCcHHHHHHHHHHhhCCeEEEEc-CCc--------eEEEcCCeEEEEec-cCCCCCCCCchHHHH
Q 016016 238 YKRLVQKVLNC-EVNDRDAPELLQSLAKQIGGVTILQK-GKS--------DLISDGEIAKSVSI-YGSPRRCGGQGDILS 306 (396)
Q Consensus 238 ~a~L~g~~~~~-~~~~~d~~~~a~~La~~~g~vvVllK-G~~--------dvI~d~~~~~~i~~-~G~~~~t~GTGDvLA 306 (396)
+..|+|..... ..+.++..+++++|.+++++..|++| |.. .++++++..+.+.. ......++|+||.|+
T Consensus 204 ~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ 283 (346)
T 3ktn_A 204 LVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYA 283 (346)
T ss_dssp HHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHH
T ss_pred HHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHH
Confidence 99999864110 01123567788888877676667777 442 56666665555431 122336999999998
Q ss_pred HHHHHHHhccCChHHHHHH
Q 016016 307 GSVAVFLSWARAKGKATTR 325 (396)
Q Consensus 307 GiIAa~LA~g~~l~~A~~~ 325 (396)
|.+.+.+..|.++++|+..
T Consensus 284 ag~~~~l~~g~~l~~a~~~ 302 (346)
T 3ktn_A 284 AGILYGYSQNWSLEKAVTF 302 (346)
T ss_dssp HHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHH
Confidence 8888888999999988763
No 31
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.17 E-value=2.1e-10 Score=111.97 Aligned_cols=157 Identities=18% Similarity=0.197 Sum_probs=103.6
Q ss_pred hcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCHH
Q 016016 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVN 236 (396)
Q Consensus 157 ~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~ 236 (396)
.++.+++++..+.+..+|+++++... .. +.+..+++.+++.++|+++||..... ....++++ .+++|+||..
T Consensus 139 ~l~~~~~~~~~~~l~~~~~v~~~~~~--~~---~~~~~~~~~a~~~g~~v~~Dp~~~~~-~~~~~ll~--~~dil~~N~~ 210 (331)
T 2fv7_A 139 LLNTEDLRAAANVISRAKVMVCQLEI--TP---ATSLEALTMARRSGVKTLFNPAPAIA-DLDPQFYT--LSDVFCCNES 210 (331)
T ss_dssp GCCHHHHHHTHHHHHHCSEEEECSSS--CH---HHHHHHHHHHHHTTCEEEECCCSCCT-TCCTHHHH--TCSEEEEEHH
T ss_pred cCCHHHHHHHHHhhccCCEEEEecCC--CH---HHHHHHHHHHHHcCCEEEEeCCcccc-cchHHHHh--cCCEEEeCHH
Confidence 45555555544456789999997432 33 24555666677789999999986420 00113443 4689999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCC--eEEEEecc-CCCCCCCCchHHHHHHHHH
Q 016016 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGE--IAKSVSIY-GSPRRCGGQGDILSGSVAV 311 (396)
Q Consensus 237 E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~--~~~~i~~~-G~~~~t~GTGDvLAGiIAa 311 (396)
|+..|+|... .+.++..+.+++|.+. ++..|++| |. +.++++++ ..+.+... .....++|+||.|++.+.+
T Consensus 211 Ea~~l~g~~~---~~~~~~~~~~~~l~~~-g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 286 (331)
T 2fv7_A 211 EAEILTGLTV---GSAADAGEAALVLLKR-GCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAF 286 (331)
T ss_dssp HHHHHHSSCC---CSHHHHHHHHHHHHTT-TCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HHHHHhCCCC---CChhHHHHHHHHHHHc-CCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHH
Confidence 9999998641 1224566777888754 55567778 43 34555554 44555321 1223699999999999999
Q ss_pred HHhcc--CChHHHHHH
Q 016016 312 FLSWA--RAKGKATTR 325 (396)
Q Consensus 312 ~LA~g--~~l~~A~~~ 325 (396)
.++.| .++++|+..
T Consensus 287 ~l~~g~~~~~~~a~~~ 302 (331)
T 2fv7_A 287 YLAYYPNLSLEDMLNR 302 (331)
T ss_dssp HHHHCTTSCHHHHHHH
T ss_pred HHHhCCCCCHHHHHHH
Confidence 99999 999888763
No 32
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.13 E-value=6.8e-10 Score=106.82 Aligned_cols=158 Identities=20% Similarity=0.226 Sum_probs=100.6
Q ss_pred cchhHHHHHHHH---hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCC
Q 016016 158 ISSKILAEVDKW---MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPN 234 (396)
Q Consensus 158 is~~~~~ev~~~---~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN 234 (396)
++.++++++.+. ++.+|++++...+... ...+.+.++++.+++.++++++||.+..+ .++++. .+++++||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~l~~-~~dil~~N 181 (306)
T 2abq_A 108 IKKEHVQALLEQLTELEKGDVLVLAGSVPQA-MPQTIYRSMTQIAKERGAFVAVDTSGEAL----HEVLAA-KPSFIKPN 181 (306)
T ss_dssp CCHHHHHHHHHHHTTCCTTCEEEEESCCCTT-SCTTHHHHHHHHHHTTTCEEEEECCHHHH----HHHGGG-CCSEECCB
T ss_pred CCHHHHHHHHHHHHhccCCCEEEEecCCCCC-CCHHHHHHHHHHHHhcCCEEEEECChHHH----HHHHhc-CCcEEecC
Confidence 444444443222 4678998884223211 00124556667777889999999985321 134432 56899999
Q ss_pred HHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHH
Q 016016 235 VNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAV 311 (396)
Q Consensus 235 ~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa 311 (396)
..|+..|+|... .+.++..+.+++|.+. +...|++|.+ +.++.++++.+.+... -....++|+||.|+|.+.+
T Consensus 182 ~~E~~~l~g~~~---~~~~~~~~~~~~l~~~-g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~ 257 (306)
T 2abq_A 182 HHELSELVSKPI---ASIEDAIPHVQRLIGE-GIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLA 257 (306)
T ss_dssp HHHHHHHHTSCC---CSHHHHHHHHHHHHHT-TCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC---CCHHHHHHHHHHHHHc-CCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHH
Confidence 999999998641 1224556677888764 5555666643 3455566665555321 1223699999999888888
Q ss_pred HHhccCChHHHHHH
Q 016016 312 FLSWARAKGKATTR 325 (396)
Q Consensus 312 ~LA~g~~l~~A~~~ 325 (396)
.+..|.++++|+..
T Consensus 258 ~l~~g~~~~~a~~~ 271 (306)
T 2abq_A 258 ALQEGKSLEDAVPF 271 (306)
T ss_dssp HHHTTCCHHHHHHH
T ss_pred HHHcCCCHHHHHHH
Confidence 88999999888763
No 33
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.10 E-value=1.5e-09 Score=106.09 Aligned_cols=148 Identities=11% Similarity=0.060 Sum_probs=102.5
Q ss_pred HHhccCCEEEEc---CCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc---hhhhcC-C-CCeeecCCHHHH
Q 016016 168 KWMERFDCLVVG---PGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-Y-PLAVLTPNVNEY 238 (396)
Q Consensus 168 ~~~~~~dalvIG---~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~---~~ll~~-~-~~~VITPN~~E~ 238 (396)
+.++.+|+++++ +|+. ++...+.+.++++.+++.++++++||+... +.... .+.+++ + ..++|+||..|+
T Consensus 141 ~~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~ 219 (328)
T 4e69_A 141 AAMARADVVYFSGITLAIL-DQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDE 219 (328)
T ss_dssp HHHTTCSEEEEEHHHHHTS-CHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHH
T ss_pred HHhcCCCEEEECCchhhcc-CchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHH
Confidence 556889999996 3333 344456777888888888999999997322 22111 112221 2 369999999999
Q ss_pred HHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc--CCCCCCCCchHHHHHHHHHHHh
Q 016016 239 KRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY--GSPRRCGGQGDILSGSVAVFLS 314 (396)
Q Consensus 239 a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~--G~~~~t~GTGDvLAGiIAa~LA 314 (396)
..|+|.+ +..+.+++|.+ +++..|++|.+ +.++.+++..+.+... .....++|+||.|++.+.+.++
T Consensus 220 ~~l~g~~--------~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~ 290 (328)
T 4e69_A 220 AAWFGDA--------GPDATADRYAR-AGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVL 290 (328)
T ss_dssp HHHHTCS--------SHHHHHHHHHT-TTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHH
T ss_pred HHHcCCC--------CHHHHHHHHHh-cCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHH
Confidence 9998742 45667777764 56666777854 3466666666666421 1233699999999999999999
Q ss_pred ccCChHHHHHH
Q 016016 315 WARAKGKATTR 325 (396)
Q Consensus 315 ~g~~l~~A~~~ 325 (396)
+|.++++|+..
T Consensus 291 ~g~~l~~a~~~ 301 (328)
T 4e69_A 291 AGQPLETAIAA 301 (328)
T ss_dssp TTCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 99999988773
No 34
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.09 E-value=2.2e-09 Score=106.18 Aligned_cols=146 Identities=17% Similarity=0.190 Sum_probs=100.5
Q ss_pred HHHHHHHhccCCEEEEc---CCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCHHHHH
Q 016016 163 LAEVDKWMERFDCLVVG---PGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNEYK 239 (396)
Q Consensus 163 ~~ev~~~~~~~dalvIG---~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~E~a 239 (396)
.+.+.+.+..+|++++. .|.. + .+.++++.+++.++++++||.... . ++++ .+++|+||..|+.
T Consensus 177 ~~~~~~~l~~~~~v~~~g~~~~~~-~-----~~~~~~~~a~~~g~~v~~D~~~~~-~----~~l~--~~dil~pN~~Ea~ 243 (352)
T 4e84_A 177 LARFDVLLPQHDVVLMSDYAKGGL-T-----HVTTMIEKARAAGKAVLVDPKGDD-W----ARYR--GASLITPNRAELR 243 (352)
T ss_dssp HHHHHHHGGGCSEEEEECCSSSSC-S-----SHHHHHHHHHHTTCEEEEECCSSC-C----STTT--TCSEECCBHHHHH
T ss_pred HHHHHHhcccCCEEEEeCCCCCCH-H-----HHHHHHHHHHhcCCEEEEECCCcc-h----hhcc--CCcEEcCCHHHHH
Confidence 34556667899999996 2222 1 144556667778999999997521 1 1222 3699999999999
Q ss_pred HHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhcc
Q 016016 240 RLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWA 316 (396)
Q Consensus 240 ~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g 316 (396)
.|+|.. .+.++..+.+++|.+++++..|++| |. +.++.+++..+.+... .....++|+||.+.|.+.+.+..|
T Consensus 244 ~l~g~~----~~~~~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g 319 (352)
T 4e84_A 244 EVVGQW----KSEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAG 319 (352)
T ss_dssp HHHCCC----SSHHHHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred HHhCCC----CCHHHHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcC
Confidence 999821 1234677788888876676566666 33 3566677766666421 222369999998888888888899
Q ss_pred CChHHHHHH
Q 016016 317 RAKGKATTR 325 (396)
Q Consensus 317 ~~l~~A~~~ 325 (396)
.++++|+..
T Consensus 320 ~~l~~al~~ 328 (352)
T 4e84_A 320 VPLVDAVVL 328 (352)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999988763
No 35
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.09 E-value=6e-10 Score=109.13 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=95.1
Q ss_pred HhccCCEEEEc-CCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc---hhhhcC-C-CCeeecCCHHHHHHH
Q 016016 169 WMERFDCLVVG-PGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-Y-PLAVLTPNVNEYKRL 241 (396)
Q Consensus 169 ~~~~~dalvIG-~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~---~~ll~~-~-~~~VITPN~~E~a~L 241 (396)
.++.++++.+. .....++...+.+.++++.+++.++++++||.-.. +.... .+.++. + ..++||||..|+..|
T Consensus 149 ~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l 228 (336)
T 4du5_A 149 WLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFL 228 (336)
T ss_dssp HHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHH
T ss_pred HhccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHH
Confidence 45678888864 21112344456677788888888999999997221 11111 112221 2 469999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEeccC-C-CCCCCCchHHHHHHHHHHHhccC
Q 016016 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIYG-S-PRRCGGQGDILSGSVAVFLSWAR 317 (396)
Q Consensus 242 ~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~G-~-~~~t~GTGDvLAGiIAa~LA~g~ 317 (396)
+|.. +..++++.|.+ .++..|++|.+ +.++++++..+.+...- . ...++|+||.|++.+.+.+..|.
T Consensus 229 ~g~~--------~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~ 299 (336)
T 4du5_A 229 TGET--------TPEGVARFYRQ-LGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGL 299 (336)
T ss_dssp HCCC--------SHHHHHHHHHH-TTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTC
T ss_pred hCCC--------CHHHHHHHHHh-cCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCC
Confidence 8742 45667777775 45556777764 35666666666664222 2 23699999999999999999999
Q ss_pred ChHHHHHH
Q 016016 318 AKGKATTR 325 (396)
Q Consensus 318 ~l~~A~~~ 325 (396)
++++|+..
T Consensus 300 ~l~~a~~~ 307 (336)
T 4du5_A 300 GVPEAVKR 307 (336)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99988763
No 36
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.07 E-value=3.9e-10 Score=110.70 Aligned_cols=158 Identities=12% Similarity=0.042 Sum_probs=100.8
Q ss_pred HHhccCCEEEEcCCCCC-CHHHHHHHHHHHHHhhcCCCCEEEecCccc-cccc--chhhhcC-C-CCeeecCCHHHHHHH
Q 016016 168 KWMERFDCLVVGPGLGR-DPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTN--SIDLVSG-Y-PLAVLTPNVNEYKRL 241 (396)
Q Consensus 168 ~~~~~~dalvIG~Gl~~-~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~--~~~ll~~-~-~~~VITPN~~E~a~L 241 (396)
.+++.+|+++++..+.. ++...+.+.++++.+++.++|+++||.... +... ..+.++. + ..++|+||..|+..|
T Consensus 134 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l 213 (351)
T 2afb_A 134 KILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKV 213 (351)
T ss_dssp HHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHH
T ss_pred HhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHH
Confidence 34578899999743321 233345667777777778999999998431 2111 0112211 2 368999999999999
Q ss_pred hcccccC---C---CCCCcHHHHHHHHHHhhCCeEEEEc-CCc---------eEEEcCCeEEEEec-cCCCCCCCCchHH
Q 016016 242 VQKVLNC---E---VNDRDAPELLQSLAKQIGGVTILQK-GKS---------DLISDGEIAKSVSI-YGSPRRCGGQGDI 304 (396)
Q Consensus 242 ~g~~~~~---~---~~~~d~~~~a~~La~~~g~vvVllK-G~~---------dvI~d~~~~~~i~~-~G~~~~t~GTGDv 304 (396)
+|..... + .+.++..+.+++|.+++++..|++| |.. .++++++..+.+.. .-....++|+||.
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDa 293 (351)
T 2afb_A 214 LGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDS 293 (351)
T ss_dssp HCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHH
T ss_pred hCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHH
Confidence 9864210 0 0123456778888776676667777 432 35565555554421 1112369999999
Q ss_pred HHHHHHHHHhccCChHHHHHH
Q 016016 305 LSGSVAVFLSWARAKGKATTR 325 (396)
Q Consensus 305 LAGiIAa~LA~g~~l~~A~~~ 325 (396)
|+|.+.+.+..|.++++|+..
T Consensus 294 F~ag~~~~l~~g~~l~~a~~~ 314 (351)
T 2afb_A 294 FAGALIYGSLMGFDSQKKAEF 314 (351)
T ss_dssp HHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHH
Confidence 888888888899999988774
No 37
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.07 E-value=2e-09 Score=104.33 Aligned_cols=141 Identities=18% Similarity=0.167 Sum_probs=94.4
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCHHHHHHHhcccccC
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNEYKRLVQKVLNC 248 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~E~a~L~g~~~~~ 248 (396)
.+..+|+++++... ..+ .+..+ +++.++|+++||.....+ ..++++ .+++|+||..|+..|+|.+.
T Consensus 137 ~~~~~~~v~~~~~~--~~~---~~~~~---a~~~~~~v~~Dp~~~~~~--~~~ll~--~~dil~~N~~E~~~l~g~~~-- 202 (311)
T 1vm7_A 137 TLSESDILLLQNEI--PFE---TTLEC---AKRFNGIVIFDPAPAQGI--NEEIFQ--YLDYLTPNEKEIEALSKDFF-- 202 (311)
T ss_dssp HHTTCSEEEECSSS--CHH---HHHHH---HHHCCSEEEECCCSCTTC--CGGGGG--GCSEECCBHHHHHHHHHHHH--
T ss_pred hcccCCEEEEeCCC--CHH---HHHHH---HHHcCCEEEEeCcchhhh--hHHHHh--hCCEEeCCHHHHHHHhCCCC--
Confidence 35789999996433 222 23333 456789999999863111 112333 36899999999999998642
Q ss_pred CCCCCcHHHHHHHHHHhhCCeEEEEcC-C-ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCChHHHHHH
Q 016016 249 EVNDRDAPELLQSLAKQIGGVTILQKG-K-SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARAKGKATTR 325 (396)
Q Consensus 249 ~~~~~d~~~~a~~La~~~g~vvVllKG-~-~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~l~~A~~~ 325 (396)
.+.++..+.+++|.+. ++..|++|. . +.++++++..+.+... -....++|+||.|++.+.+.+..|.++++|+..
T Consensus 203 -~~~~~~~~~~~~l~~~-g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 280 (311)
T 1vm7_A 203 -GEFLTVEKAAEKFLEL-GVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIF 280 (311)
T ss_dssp -SCCCCHHHHHHHHHHT-TCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred -CChhHHHHHHHHHHHc-CCCEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 1234677788888764 555677774 3 3455566665555321 122369999999999999999999999988774
No 38
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.06 E-value=1.2e-09 Score=105.90 Aligned_cols=157 Identities=14% Similarity=0.110 Sum_probs=103.2
Q ss_pred cchhHHHHHHHHhccCCEEEEc---CCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc---hhhhcC-C-CC
Q 016016 158 ISSKILAEVDKWMERFDCLVVG---PGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-Y-PL 228 (396)
Q Consensus 158 is~~~~~ev~~~~~~~dalvIG---~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~---~~ll~~-~-~~ 228 (396)
++++.++++.+.++.+|+++++ ++.. ++...+.+.++++.+++.++++++||.... ++... .+.++. + ..
T Consensus 115 ~~~~~~~~~~~~l~~~~~v~~~g~~~~~l-~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~ 193 (319)
T 3lhx_A 115 LASEQSAAICEELANFDYLYLSGISLAIL-SPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECT 193 (319)
T ss_dssp TSSSSHHHHHHHHTTCSEEEEEHHHHHTS-CHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTC
T ss_pred cCccchhhHHHHhcCCCEEEEcCchhhhc-CchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhC
Confidence 3444455666677899999996 1121 344456777888888888999999997432 22111 112221 2 36
Q ss_pred eeecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEE-EEecc----CCCCCCCCc
Q 016016 229 AVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAK-SVSIY----GSPRRCGGQ 301 (396)
Q Consensus 229 ~VITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~-~i~~~----G~~~~t~GT 301 (396)
++|+||..|+..|+|.. +..+.+++|.+ +++..|++|.+ +.++.++++.+ .+... .....++|+
T Consensus 194 di~~~n~~E~~~l~g~~--------~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGA 264 (319)
T 3lhx_A 194 DIAFLTLDDEDALWGQQ--------PVEDVIARTHN-AGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAA 264 (319)
T ss_dssp SEEEEEHHHHHHHHCCC--------CHHHHHHHHHH-TTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTH
T ss_pred CcccCCHHHHHHHhCCC--------CHHHHHHHHHh-cCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCc
Confidence 89999999999998742 45677788865 45556667744 34555544332 44321 112369999
Q ss_pred hHHHHHHHHHHHhccCChHHHHH
Q 016016 302 GDILSGSVAVFLSWARAKGKATT 324 (396)
Q Consensus 302 GDvLAGiIAa~LA~g~~l~~A~~ 324 (396)
||.|+|.+.+.+..|.++++|+.
T Consensus 265 GDaf~a~~~~~l~~g~~~~~a~~ 287 (319)
T 3lhx_A 265 GDSFSAGYLAVRLTGGSAENAAK 287 (319)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999998889999999887766
No 39
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.06 E-value=3.5e-10 Score=110.29 Aligned_cols=147 Identities=11% Similarity=0.050 Sum_probs=99.5
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc--hhhhcC-C-CCeeecCCHHHHHHHhc
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS--IDLVSG-Y-PLAVLTPNVNEYKRLVQ 243 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~--~~ll~~-~-~~~VITPN~~E~a~L~g 243 (396)
.++.+++++++.-+..++...+.+.++++.+++.++++++||.... +.... .+.++. + .+++|+||..|+..|+|
T Consensus 127 ~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 206 (330)
T 3iq0_A 127 ILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSP 206 (330)
T ss_dssp GGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCS
T ss_pred HhccCCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhC
Confidence 4567889988632223455556777888888888999999997543 22111 111211 1 46999999999999976
Q ss_pred ccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCChH
Q 016016 244 KVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARAKG 320 (396)
Q Consensus 244 ~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~l~ 320 (396)
. .+..+.+++|.+. ++..|++|.+ +.++++++..+.+... -....++|+||.|+|.+.+.+..|.+++
T Consensus 207 ~--------~~~~~~~~~l~~~-g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~ 277 (330)
T 3iq0_A 207 H--------STPERAIAGFLEE-GVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDAH 277 (330)
T ss_dssp C--------SSHHHHHHHHHHH-TCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred C--------CCHHHHHHHHHHc-CCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHH
Confidence 4 2456777888764 5555666643 3566676666666421 2223699999998888888889999999
Q ss_pred HHHH
Q 016016 321 KATT 324 (396)
Q Consensus 321 ~A~~ 324 (396)
+|+.
T Consensus 278 ~a~~ 281 (330)
T 3iq0_A 278 RALQ 281 (330)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8876
No 40
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.06 E-value=2.1e-10 Score=112.08 Aligned_cols=182 Identities=13% Similarity=0.077 Sum_probs=103.5
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-cccc---chhhhcC-C-CCeeecCCHHHHHHHh
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTN---SIDLVSG-Y-PLAVLTPNVNEYKRLV 242 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~---~~~ll~~-~-~~~VITPN~~E~a~L~ 242 (396)
+++.+|++.++.+...++...+.+.++++.+++.++++++||.-.. +... ..+.++. + .++|||||..|+..|+
T Consensus 126 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~ 205 (338)
T 3ljs_A 126 SFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLA 205 (338)
T ss_dssp HHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHH
T ss_pred HhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHh
Confidence 4567899988754444555567788888888888999999995321 1110 0112221 2 4699999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhcc---
Q 016016 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWA--- 316 (396)
Q Consensus 243 g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g--- 316 (396)
|... . +..+.+++|.+ .++..|++|.+ +.++++++..+.+... -....++|+||.|+|.+.+.+..|
T Consensus 206 g~~~---~---~~~~~~~~l~~-~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~ 278 (338)
T 3ljs_A 206 NTLA---A---DANAVIQQLWQ-GRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDD 278 (338)
T ss_dssp HHHT---S---CHHHHHHHHTT-TTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSS
T ss_pred CCCC---h---hHHHHHHHHHh-cCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCc
Confidence 8641 1 11236677764 56556667754 3456666665555321 122269999998888887777777
Q ss_pred -----------CChHHHHHHHhhhhhhHhhhhhHhhHH--HHHhHHHHHHHHHHHhhhhcc
Q 016016 317 -----------RAKGKATTRLYYNLSFKLGRQLFCFLS--LISCLATYSFLMRLLQSDESN 364 (396)
Q Consensus 317 -----------~~l~~A~~~~y~~~~~~aai~~~~~~~--~a~~~a~~~~~~~~~~~~~~~ 364 (396)
.++++|+. |..+.++.+... -...+-..+++.++++.--++
T Consensus 279 ~~~~~~~~~~~~~l~~al~-------~A~~~aa~~v~~~Ga~~~~p~~~ev~~~~~~~~~~ 332 (338)
T 3ljs_A 279 AAALIDFCHDPESIVSTLR-------FAAAVGALAVTRQGAFTAMPMLSEVLSLIQEQSEG 332 (338)
T ss_dssp THHHHHHHTCHHHHHHHHH-------HHHHHHGGGC----CCCCTTHHHHHHHHHHHHHC-
T ss_pred ccchhccccChHHHHHHHH-------HHHHHHHHHhCCCCCCCCCCCHHHHHHHHhhhccc
Confidence 44554444 222223222221 112345677777777655444
No 41
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.05 E-value=2.2e-09 Score=104.05 Aligned_cols=154 Identities=13% Similarity=0.076 Sum_probs=95.7
Q ss_pred cchhHHHHHH--HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCH
Q 016016 158 ISSKILAEVD--KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNV 235 (396)
Q Consensus 158 is~~~~~ev~--~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~ 235 (396)
++.+.+++.. +++..++++++...+ ..+ .+..+++.+++.++|+++||++........++++ ..++|+||.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~ll~--~~dil~~N~ 190 (317)
T 2nwh_A 118 FTPRRLKVRAVREAIIASDFLLCDANL--PED---TLTALGLIARACEKPLAAIAISPAKAVKLKAALG--DIDILFMNE 190 (317)
T ss_dssp CCHHHHTSHHHHHHHHHCSEEEEETTS--CHH---HHHHHHHHHHHTTCCEEEECCSHHHHGGGTTTGG--GCSEEEEEH
T ss_pred CCHHHhhhhhhhhHhccCCEEEEeCCC--CHH---HHHHHHHHHHhcCCeEEEeCCCHHHHHHHHHHhh--hCeEecCCH
Confidence 4444444333 566789999996433 233 4556667777789999999986322110011222 368999999
Q ss_pred HHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcC-C-ceEEEcCC-eEEEEec-cCCCCCCCCchHHHHHHHHH
Q 016016 236 NEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKG-K-SDLISDGE-IAKSVSI-YGSPRRCGGQGDILSGSVAV 311 (396)
Q Consensus 236 ~E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG-~-~dvI~d~~-~~~~i~~-~G~~~~t~GTGDvLAGiIAa 311 (396)
.|+..|+|.. .++..+.+++|.+ .++..|++|. . +.++.+++ ..+.+.. ......++|+||.|++.+.+
T Consensus 191 ~E~~~l~g~~------~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~ 263 (317)
T 2nwh_A 191 AEARALTGET------AENVRDWPNILRK-AGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLA 263 (317)
T ss_dssp HHHHHHHC-----------CTTHHHHHHH-TTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHH
T ss_pred HHHHHHhCCC------hhHHHHHHHHHHH-cCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHH
Confidence 9999998852 1223345667765 3444455564 3 34555554 3444431 11223699999999988888
Q ss_pred HHhccCChHHHHHH
Q 016016 312 FLSWARAKGKATTR 325 (396)
Q Consensus 312 ~LA~g~~l~~A~~~ 325 (396)
.+..|.++++|+..
T Consensus 264 ~l~~g~~~~~a~~~ 277 (317)
T 2nwh_A 264 AIAEGKTIREALRQ 277 (317)
T ss_dssp HHHTTCCHHHHHHH
T ss_pred HHHcCCCHHHHHHH
Confidence 88999999988773
No 42
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.05 E-value=1.7e-09 Score=105.67 Aligned_cols=150 Identities=16% Similarity=0.216 Sum_probs=96.6
Q ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCC-CCeeecCCHHHHHHHhcccc
Q 016016 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGY-PLAVLTPNVNEYKRLVQKVL 246 (396)
Q Consensus 168 ~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~-~~~VITPN~~E~a~L~g~~~ 246 (396)
++++.+|++++...+... ...+.+.++++.+++.++++++||.+..+ .++++.. .+++|+||..|+..|+|...
T Consensus 143 ~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~l----~~~l~~~~~~dil~~N~~E~~~l~g~~~ 217 (330)
T 2jg1_A 143 QMMEKVEAVAISGSLPKG-LNQDYYAQIIERCQNKGVPVILDCSGATL----QTVLENPYKPTVIKPNISELYQLLNQPL 217 (330)
T ss_dssp HHGGGCSEEEEESCCCBT-SCTTHHHHHHHHHHTTTCCEEEECCHHHH----HHHHTSSSCCSEECCBHHHHHHHTTSCC
T ss_pred HhcCCCCEEEEECCCCCC-CCHHHHHHHHHHHHHCCCEEEEECCcHHH----HHHHhccCCceEEEeCHHHHHHHhCCCC
Confidence 446789999984223211 00124556667777889999999985321 1244311 47899999999999988541
Q ss_pred cCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCChHHHH
Q 016016 247 NCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARAKGKAT 323 (396)
Q Consensus 247 ~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~l~~A~ 323 (396)
. .+.++..+.+++|.+ .++..|++| |. +.++.++++.+.+... .....++|+||.|+|.+.+.+..|.++++|+
T Consensus 218 ~--~~~~~~~~~~~~l~~-~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~l~~al 294 (330)
T 2jg1_A 218 D--ESLESLKQAVSQPLF-EGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLL 294 (330)
T ss_dssp C--CCHHHHHHHHHSGGG-TTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred C--CCHHHHHHHHHHHHH-cCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCCHHHHH
Confidence 0 022345566677654 355566777 43 3455666665555321 1223699999988888888888999999887
Q ss_pred HH
Q 016016 324 TR 325 (396)
Q Consensus 324 ~~ 325 (396)
..
T Consensus 295 ~~ 296 (330)
T 2jg1_A 295 KK 296 (330)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 43
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.04 E-value=2.5e-10 Score=111.50 Aligned_cols=149 Identities=14% Similarity=0.159 Sum_probs=94.8
Q ss_pred HHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCC-CCeeecCCHHH-HHHHhcc
Q 016016 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGY-PLAVLTPNVNE-YKRLVQK 244 (396)
Q Consensus 167 ~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~-~~~VITPN~~E-~a~L~g~ 244 (396)
.+.+..+|++++...+.... ..+.+.++++.+++.++++++||.+..+ .++++.. .+++|+||..| +..|+|.
T Consensus 141 ~~~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~l~~~~~~dil~~N~~E~~~~l~g~ 215 (331)
T 2ajr_A 141 KMTLSKVDCVVISGSIPPGV-NEGICNELVRLARERGVFVFVEQTPRLL----ERIYEGPEFPNVVKPDLRGNHASFLGV 215 (331)
T ss_dssp HHHHTTCSEEEEESCCCTTS-CTTHHHHHHHHHHHTTCEEEEECCHHHH----HHHHHSSCCCSEECCCCTTCCSCBTTB
T ss_pred HHhcccCCEEEEECCCCCCC-CHHHHHHHHHHHHHcCCEEEEECChHHH----HHHHhcCCCCeEEEeCccchHHHHhCC
Confidence 34567899999953232110 0124556666677789999999986321 1344421 26899999999 9999875
Q ss_pred cccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEe-ccC-CCCCCCCchHHHHHHHHHHHh-ccCCh
Q 016016 245 VLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVS-IYG-SPRRCGGQGDILSGSVAVFLS-WARAK 319 (396)
Q Consensus 245 ~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~-~~G-~~~~t~GTGDvLAGiIAa~LA-~g~~l 319 (396)
.. .+.++..+.+++|.+. ...|++| |. +.++++++..+.+. ..- ....++|+||.|++.+.+.+. .|.++
T Consensus 216 ~~---~~~~~~~~~~~~l~~~--~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~~ 290 (331)
T 2ajr_A 216 DL---KTFDDYVKLAEKLAEK--SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGANF 290 (331)
T ss_dssp CC---CSHHHHHHHHHHHHHH--SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSCH
T ss_pred CC---CCHHHHHHHHHHHHHh--cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCCH
Confidence 41 1223556677888765 3344555 43 45566666555553 211 122699999987777777777 89999
Q ss_pred HHHHHH
Q 016016 320 GKATTR 325 (396)
Q Consensus 320 ~~A~~~ 325 (396)
++|+..
T Consensus 291 ~~al~~ 296 (331)
T 2ajr_A 291 LEMAKF 296 (331)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888763
No 44
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.00 E-value=6.2e-09 Score=102.45 Aligned_cols=138 Identities=16% Similarity=0.161 Sum_probs=93.6
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchh-hhcCCCCeeecCCHHHHHHHhccccc
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSID-LVSGYPLAVLTPNVNEYKRLVQKVLN 247 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~-ll~~~~~~VITPN~~E~a~L~g~~~~ 247 (396)
.+..+|+++++.-+ .+ .+..+++.+++.++++++||.... ....+ +++ .+++|+||..|+..|+|..
T Consensus 154 ~l~~~~~v~~~~~~---~~---~~~~~~~~a~~~g~~v~~Dp~~~~--~~~~~~ll~--~~dil~~N~~Ea~~l~g~~-- 221 (343)
T 2rbc_A 154 DIALFDAVLVDVRW---PE---LALDVLTVARALGKPAILDGDVAP--VETLEGLAP--AATHIVFSEPAATRLTGLE-- 221 (343)
T ss_dssp HHTTCSEEEECSSS---HH---HHHHHHHHHHHTTCCEEEEECSCC--HHHHHHHGG--GCSEEEEEHHHHHHHHCCS--
T ss_pred hhCCCCEEEEcCCC---HH---HHHHHHHHHHHCCCEEEEECCccc--cccHHHHHh--cCCEEEeCHHHHHHHcCCC--
Confidence 45789999997422 22 455566667778999999997531 10012 332 3689999999999998742
Q ss_pred CCCCCCcHHHHHHHHHHhhCC-eEEEEcCC--ceEEEcCC--eEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCChHH
Q 016016 248 CEVNDRDAPELLQSLAKQIGG-VTILQKGK--SDLISDGE--IAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARAKGK 321 (396)
Q Consensus 248 ~~~~~~d~~~~a~~La~~~g~-vvVllKG~--~dvI~d~~--~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~l~~ 321 (396)
+..+.++.|.+ .+. ..|++|.+ +.++.+++ ..+.+... .....++|+||.|++.+.+.+..|.++++
T Consensus 222 ------~~~~~~~~l~~-~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~ 294 (343)
T 2rbc_A 222 ------TVKDMLPVLHA-RYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQSRA 294 (343)
T ss_dssp ------SHHHHHHHHHH-HSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred ------CHHHHHHHHHH-hCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCCHHH
Confidence 45677778865 454 45666743 34556655 55555321 12236999999998888888899999998
Q ss_pred HHHH
Q 016016 322 ATTR 325 (396)
Q Consensus 322 A~~~ 325 (396)
|+..
T Consensus 295 a~~~ 298 (343)
T 2rbc_A 295 AVRL 298 (343)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8773
No 45
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=98.95 E-value=2.9e-09 Score=104.09 Aligned_cols=154 Identities=12% Similarity=0.117 Sum_probs=99.6
Q ss_pred HHHHhccCCEEEEc-CCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcC-C-CCeeecCCHHHHHHHh
Q 016016 166 VDKWMERFDCLVVG-PGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-Y-PLAVLTPNVNEYKRLV 242 (396)
Q Consensus 166 v~~~~~~~dalvIG-~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~-~-~~~VITPN~~E~a~L~ 242 (396)
+.+.++.+|+++++ ..+..+. +.+..+++.+++.++++++||.+........+.+++ + ..++|+||..|+..|+
T Consensus 155 ~~~~~~~~~~v~~~g~~~~~~~---~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 231 (345)
T 1bx4_A 155 NWMLVEKARVCYIAGFFLTVSP---ESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFA 231 (345)
T ss_dssp HHHHHHHCSEEEEEGGGGGTCH---HHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHH
T ss_pred HHHHHhhCCEEEEEEEeccCCH---HHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 34556789999995 2111233 355666677777889999999854221111111211 2 3689999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHh-----hCCeEEEEcC-C-ceEEEcCCeEEEEecc-C---CCCCCCCchHHHHHHHHH
Q 016016 243 QKVLNCEVNDRDAPELLQSLAKQ-----IGGVTILQKG-K-SDLISDGEIAKSVSIY-G---SPRRCGGQGDILSGSVAV 311 (396)
Q Consensus 243 g~~~~~~~~~~d~~~~a~~La~~-----~g~vvVllKG-~-~dvI~d~~~~~~i~~~-G---~~~~t~GTGDvLAGiIAa 311 (396)
|... .+.++..+++++|.+. .++..|++|. . +.++.+++..+.+... . ....++|+||.|+|.+.+
T Consensus 232 g~~~---~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~ 308 (345)
T 1bx4_A 232 REQG---FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLS 308 (345)
T ss_dssp HHTT---CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHH
T ss_pred cccC---CCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHH
Confidence 8641 2335677888888762 3555566664 3 3455666655555421 1 233699999999888888
Q ss_pred HHhccCChHHHHHH
Q 016016 312 FLSWARAKGKATTR 325 (396)
Q Consensus 312 ~LA~g~~l~~A~~~ 325 (396)
.+..|.++++|+..
T Consensus 309 ~l~~g~~~~~a~~~ 322 (345)
T 1bx4_A 309 QLVSDKPLTECIRA 322 (345)
T ss_dssp HHTTTCCHHHHHHH
T ss_pred HHHcCCCHHHHHHH
Confidence 89999999888763
No 46
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=98.94 E-value=9.9e-10 Score=106.93 Aligned_cols=148 Identities=11% Similarity=0.110 Sum_probs=90.4
Q ss_pred HHhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEecCcccc-cccc---hhhhcC-C-CCeeecCCHHHHHH
Q 016016 168 KWMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLFL-VTNS---IDLVSG-Y-PLAVLTPNVNEYKR 240 (396)
Q Consensus 168 ~~~~~~dalvIG~Gl~-~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~l-l~~~---~~ll~~-~-~~~VITPN~~E~a~ 240 (396)
++++.+|++.++. +. ......+.+.++++.+++.++++++||..... .... .+.++. + .+++|+||..|+..
T Consensus 140 ~~~~~~~~v~~~g-~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~ 218 (327)
T 3hj6_A 140 ELIKRSKVFHLST-FILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARH 218 (327)
T ss_dssp HHHC--CEEEEES-HHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHH
T ss_pred hHhccCCEEEECc-hHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHH
Confidence 3567889999863 21 12223456777888888889999999975432 1111 112221 2 36999999999999
Q ss_pred HhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccC
Q 016016 241 LVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWAR 317 (396)
Q Consensus 241 L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~ 317 (396)
|+|.. + ..+.+++|. +.++..|++|.+ +.++.+++..+.+... .....++|+||.|+|.+.+.+..|.
T Consensus 219 l~g~~-----~---~~~~~~~l~-~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~ 289 (327)
T 3hj6_A 219 LFGPD-----S---PENYVKRYL-ELGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGY 289 (327)
T ss_dssp HHTTS-----C---SSGGGGGGT-TTTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCS
T ss_pred HhCCC-----C---HHHHHHHHH-hCCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCC
Confidence 99852 1 112344554 345555666643 4566666665555321 1222699999999888888889999
Q ss_pred ChHHHHHH
Q 016016 318 AKGKATTR 325 (396)
Q Consensus 318 ~l~~A~~~ 325 (396)
++++|+..
T Consensus 290 ~~~~a~~~ 297 (327)
T 3hj6_A 290 TVKRSIKL 297 (327)
T ss_dssp TTHHHHHH
T ss_pred CHHHHHHH
Confidence 99988763
No 47
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=98.94 E-value=2.6e-09 Score=106.26 Aligned_cols=162 Identities=12% Similarity=0.070 Sum_probs=105.9
Q ss_pred hcchhHHHH--HHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccc----hhhhcCCCCee
Q 016016 157 CISSKILAE--VDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSGYPLAV 230 (396)
Q Consensus 157 ~is~~~~~e--v~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~----~~ll~~~~~~V 230 (396)
.++.+++++ +.+.+..+|+++++ |.... -..+.+.++++.+++.++++++||.+....... .++++ ..++
T Consensus 161 ~l~~~~~~~~~~~~~~~~~~~v~~~-g~~~~-~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~--~~di 236 (370)
T 3vas_A 161 DLSLAHIEQPHVWSLVEKAQVYYIA-GFVIN-TCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS--YSNI 236 (370)
T ss_dssp GCCHHHHTSHHHHHHHHHCSEEEEE-GGGHH-HHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT--TCSE
T ss_pred hCCHHHcCchhhHHHHhhCCEEEEE-eeecc-CCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh--hCCE
Confidence 344444432 34566789999995 22211 123466777788888899999999754321111 12332 3689
Q ss_pred ecCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHh-----h-CCeEEEEcC-C-ceEEEc--CCeEEEEeccC----CCC
Q 016016 231 LTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQ-----I-GGVTILQKG-K-SDLISD--GEIAKSVSIYG----SPR 296 (396)
Q Consensus 231 ITPN~~E~a~L~g~~~~~~~~~~d~~~~a~~La~~-----~-g~vvVllKG-~-~dvI~d--~~~~~~i~~~G----~~~ 296 (396)
|+||..|+..|+|... .+.++..+++++|.+. . ++..|++|. . +.++.+ ++..+.+...- ...
T Consensus 237 l~~N~~Ea~~l~g~~~---~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vv 313 (370)
T 3vas_A 237 VFGNESEAEAYGEVHG---LLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQII 313 (370)
T ss_dssp EEEEHHHHHHHHHHTT---CCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCS
T ss_pred EEcCHHHHHHHhcccC---CCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcC
Confidence 9999999999998642 2335677888888864 2 555566663 3 345666 55555554221 223
Q ss_pred CCCCchHHHHHHHHHHHhccCChHHHHHH
Q 016016 297 RCGGQGDILSGSVAVFLSWARAKGKATTR 325 (396)
Q Consensus 297 ~t~GTGDvLAGiIAa~LA~g~~l~~A~~~ 325 (396)
.++|+||.|+|.+.+.+.+|.++++|+..
T Consensus 314 DttGAGDaF~ag~l~~l~~g~~l~~a~~~ 342 (370)
T 3vas_A 314 DTNGAGDAFAAGFIADYIRGKPMITSLHA 342 (370)
T ss_dssp CCTTHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 69999999988888889999999988763
No 48
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=98.93 E-value=6.6e-09 Score=100.89 Aligned_cols=150 Identities=16% Similarity=0.056 Sum_probs=95.3
Q ss_pred hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccccc-ccc---hhhhcC-C-CCeeecCCHHHHHHHhc
Q 016016 170 MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLV-TNS---IDLVSG-Y-PLAVLTPNVNEYKRLVQ 243 (396)
Q Consensus 170 ~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll-~~~---~~ll~~-~-~~~VITPN~~E~a~L~g 243 (396)
++.+|+++++.-+.......+.+.++++.+++.++++++||+....+ ... .+.++. + ..++|+||..|+..|+|
T Consensus 136 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 215 (332)
T 2qcv_A 136 IRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLEN 215 (332)
T ss_dssp HTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTT
T ss_pred HccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhC
Confidence 46788888752111111112456667777777899999999853221 110 011221 2 36899999999999988
Q ss_pred ccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcC-CeEEEEec-cCCCCCCCCchHHHHHHHHHHHhccCCh
Q 016016 244 KVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDG-EIAKSVSI-YGSPRRCGGQGDILSGSVAVFLSWARAK 319 (396)
Q Consensus 244 ~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~-~~~~~i~~-~G~~~~t~GTGDvLAGiIAa~LA~g~~l 319 (396)
... .++..+.+++|.+ .++..|++|.+ +.+++++ +..+.+.. ......++|+||.|++.+.+.+..|.++
T Consensus 216 ~~~-----~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~~ 289 (332)
T 2qcv_A 216 RTE-----KGDNDETIRYLFK-HSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKGI 289 (332)
T ss_dssp CSS-----CCCHHHHHHHHTT-SSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred CCc-----CCCHHHHHHHHHH-cCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCCH
Confidence 541 2345667777765 45556677743 3455554 44555532 1223369999999998888888999999
Q ss_pred HHHHHH
Q 016016 320 GKATTR 325 (396)
Q Consensus 320 ~~A~~~ 325 (396)
++|+..
T Consensus 290 ~~a~~~ 295 (332)
T 2qcv_A 290 ETALKY 295 (332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
No 49
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=98.93 E-value=1.9e-09 Score=106.43 Aligned_cols=148 Identities=16% Similarity=0.092 Sum_probs=98.2
Q ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHHHHhc
Q 016016 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQ 243 (396)
Q Consensus 168 ~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a~L~g 243 (396)
+.++.++++++.--+...+...+.+.++++.+++.++++++||.......... ++++....++|+||..|+..|+|
T Consensus 167 ~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g 246 (352)
T 4e3a_A 167 DVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ 246 (352)
T ss_dssp HHHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT
T ss_pred HHHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC
Confidence 34578899988521222222345677777888888999999997543221111 23321137999999999999987
Q ss_pred ccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEeccC-C-CCCCCCchHHHHHHHHHHHhccCCh
Q 016016 244 KVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIYG-S-PRRCGGQGDILSGSVAVFLSWARAK 319 (396)
Q Consensus 244 ~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~G-~-~~~t~GTGDvLAGiIAa~LA~g~~l 319 (396)
.. +..++++.|.+... .|++|.+ +.++.+++..+.+...- . ...++|+||.|+|.+.+.+.+|.++
T Consensus 247 ~~--------~~~~a~~~l~~~~~--~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~l 316 (352)
T 4e3a_A 247 TD--------DFEEALNRIAADCK--IAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSL 316 (352)
T ss_dssp CS--------CHHHHHHHHHHHSS--EEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred CC--------CHHHHHHHHhcCCC--EEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCCH
Confidence 42 45567777776443 4455543 35666777766664222 2 1369999999999888899999999
Q ss_pred HHHHHH
Q 016016 320 GKATTR 325 (396)
Q Consensus 320 ~~A~~~ 325 (396)
++|+..
T Consensus 317 ~~a~~~ 322 (352)
T 4e3a_A 317 EDCGKL 322 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988773
No 50
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=98.83 E-value=1.5e-08 Score=98.14 Aligned_cols=140 Identities=15% Similarity=0.195 Sum_probs=90.4
Q ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcC-C-CCeeecCCHHHHHHHhccc
Q 016016 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-Y-PLAVLTPNVNEYKRLVQKV 245 (396)
Q Consensus 168 ~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~-~-~~~VITPN~~E~a~L~g~~ 245 (396)
+.++.+|+++++. + .++ ....+++.+ +.+.++++||..+.. ....+.+++ + .+++|+||..|+..|+|..
T Consensus 115 ~~~~~~~~v~~~~-~--~~~---~~~~~~~~~-~~~~~v~~Dp~~~~~-~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~ 186 (313)
T 3kd6_A 115 QYYRDSKFVCLGN-I--DPE---LQLKVLDQI-DDPKLVVCDTMNFWI-EGKPEELKKVLARVDVFIVNDSEARLLSGDP 186 (313)
T ss_dssp GGGTTCSEEEECS-S--CHH---HHHHHHTTC-SSCSEEEEECCHHHH-HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS
T ss_pred HHHccCCEEEEcC-C--CHH---HHHHHHHHH-hhCCEEEEcChhhhh-hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC
Confidence 3457899999953 3 232 233445555 567889999943211 101112211 2 4799999999999998742
Q ss_pred ccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEeccC--CCCCCCCchHHHHHHHHHHHhccC----
Q 016016 246 LNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIYG--SPRRCGGQGDILSGSVAVFLSWAR---- 317 (396)
Q Consensus 246 ~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~G--~~~~t~GTGDvLAGiIAa~LA~g~---- 317 (396)
+..+.+++|.+ +++..|++|.+ +.++++++..+.+...- .+..++|+||.|+|.+.+.++.|.
T Consensus 187 --------~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 257 (313)
T 3kd6_A 187 --------NLVKTARIIRE-MGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNTSE 257 (313)
T ss_dssp --------CHHHHHHHHHT-TSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCCCH
T ss_pred --------CHHHHHHHHHH-cCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCccc
Confidence 45677888875 56656677743 35666666666664221 233699999988888888888887
Q ss_pred -ChHHHHH
Q 016016 318 -AKGKATT 324 (396)
Q Consensus 318 -~l~~A~~ 324 (396)
++++|+.
T Consensus 258 ~~l~~a~~ 265 (313)
T 3kd6_A 258 AEMRKAVL 265 (313)
T ss_dssp HHHHHHHH
T ss_pred cCHHHHHH
Confidence 6776665
No 51
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=98.83 E-value=3.9e-08 Score=94.93 Aligned_cols=146 Identities=16% Similarity=0.079 Sum_probs=91.9
Q ss_pred HhccCCEEEEcC-CCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccccc-ccc---hhhhcC-C-CCeeecCCHHHHHHH
Q 016016 169 WMERFDCLVVGP-GLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLV-TNS---IDLVSG-Y-PLAVLTPNVNEYKRL 241 (396)
Q Consensus 169 ~~~~~dalvIG~-Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll-~~~---~~ll~~-~-~~~VITPN~~E~a~L 241 (396)
.+..+|+++++. ++..+. ..+.+..+++.++ .+.++++||.--..+ ... .+.++. + ..++|+||..|+..|
T Consensus 132 ~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~-~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l 209 (319)
T 3pl2_A 132 DVREADILWFTLTGFSEEP-SRGTHREILTTRA-NRRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIA 209 (319)
T ss_dssp HHHHCSEEEEEGGGGSSTT-HHHHHHHHHHHHT-TCSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred HhccCCEEEEecccccCch-hHHHHHHHHHHHH-HCCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHH
Confidence 356789999862 222222 2234455555554 467899999632211 100 112221 2 368999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccCC
Q 016016 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWARA 318 (396)
Q Consensus 242 ~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~~ 318 (396)
+|.. +..+.+++|.+ .+...|++| |. +.++.+++..+.+... -....++|+||.|+|.+.+.+.+|.+
T Consensus 210 ~g~~--------~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~ 280 (319)
T 3pl2_A 210 VGET--------EPERAGRALLE-RGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP 280 (319)
T ss_dssp HSCC--------SHHHHHHHHHH-TTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred cCCC--------CHHHHHHHHHh-cCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC
Confidence 8742 45667788876 455455666 33 4566666666666421 22236999999888888888889999
Q ss_pred hHHHHHH
Q 016016 319 KGKATTR 325 (396)
Q Consensus 319 l~~A~~~ 325 (396)
+++|+..
T Consensus 281 ~~~a~~~ 287 (319)
T 3pl2_A 281 LEKVLRF 287 (319)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988763
No 52
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=98.82 E-value=1.4e-08 Score=97.57 Aligned_cols=137 Identities=14% Similarity=0.014 Sum_probs=88.9
Q ss_pred hcchhHHHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCCCeeecCCHH
Q 016016 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVN 236 (396)
Q Consensus 157 ~is~~~~~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~ 236 (396)
.++.++++++.+.+..+|++++.. .. .. +.+.++++.+++.++++++||....-. ..++++ ..++|+||..
T Consensus 116 ~l~~~~~~~~~~~~~~~~~v~~~g-~~-~~---~~~~~~~~~a~~~g~~v~~D~~~~~~~--~~~ll~--~~dil~~N~~ 186 (299)
T 3ikh_A 116 TFSLDEMIPHMADAVAGDILLQQG-NF-SL---DKTRALFQYARSRGMTTVFNPSPVNPD--FCHLWP--LIDIAVVNES 186 (299)
T ss_dssp HCCHHHHGGGGTTCCTTCEEEECS-CS-CH---HHHHHHHHHHHHTTCEEEECCCSCCGG--GGGCGG--GCSEEEEEHH
T ss_pred cCCHHHHHHHHhhhccCCEEEECC-CC-CH---HHHHHHHHHHHHcCCEEEEccccchhh--HHHHHh--hCCEEEecHH
Confidence 455544444344457899999963 32 33 245566677777899999999754210 012222 3689999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHH-HHHHH
Q 016016 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSG-SVAVF 312 (396)
Q Consensus 237 E~a~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAG-iIAa~ 312 (396)
|+..|++ .++..|++|.+ +.++.+++..+.+... -....++|+||.|+| .+.+.
T Consensus 187 E~~~l~g----------------------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~ 244 (299)
T 3ikh_A 187 EAELLQP----------------------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASA 244 (299)
T ss_dssp HHHHHCC----------------------CSCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHhc----------------------CCCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHH
Confidence 9999975 23334455532 3566666666666421 222369999998888 88888
Q ss_pred HhccCChHH-HHH
Q 016016 313 LSWARAKGK-ATT 324 (396)
Q Consensus 313 LA~g~~l~~-A~~ 324 (396)
+..|.++++ |+.
T Consensus 245 l~~g~~~~~~a~~ 257 (299)
T 3ikh_A 245 LLRGVAPDALALA 257 (299)
T ss_dssp HHTTSSSCHHHHH
T ss_pred HHcCCCHHHHHHH
Confidence 888998887 765
No 53
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=98.81 E-value=1.8e-08 Score=100.33 Aligned_cols=155 Identities=14% Similarity=0.087 Sum_probs=97.6
Q ss_pred HHHHhccCCEEEEc-CCCCCCHHHHHHHHHHHHHhhc-CCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHH
Q 016016 166 VDKWMERFDCLVVG-PGLGRDPYLLECVSEIMKHARQ-SNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYK 239 (396)
Q Consensus 166 v~~~~~~~dalvIG-~Gl~~~~~~~~~v~~~l~~a~~-~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a 239 (396)
..+.+..+|+++++ ..+.... +.+..+++.+++ .++++++||.+........ ++++ ..++|+||..|+.
T Consensus 174 ~~~~l~~~~~v~~~g~~~~~~~---~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~--~~dil~pN~~Ea~ 248 (383)
T 2abs_A 174 WTTFASGALIFYATAYTLTATP---KNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEFA 248 (383)
T ss_dssp HHHHTTTCCEEEEEGGGGTTCH---HHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHH--TCSEEEEEHHHHH
T ss_pred hHHHhhcCCEEEEeeecccCCH---HHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHh--hCCEEeCCHHHHH
Confidence 34456789999995 1111233 355667777777 7899999998543211111 2332 3689999999999
Q ss_pred HHhccc-ccCCCC--------CCcHHHHHHHHHHh-----h-CCeEEEEcCC--ceEEE-----cCCeEEEEecc-C---
Q 016016 240 RLVQKV-LNCEVN--------DRDAPELLQSLAKQ-----I-GGVTILQKGK--SDLIS-----DGEIAKSVSIY-G--- 293 (396)
Q Consensus 240 ~L~g~~-~~~~~~--------~~d~~~~a~~La~~-----~-g~vvVllKG~--~dvI~-----d~~~~~~i~~~-G--- 293 (396)
.|+|.. ...+.+ .++..+++++|.+. . ++..|++|.+ +.++. +++..+.+... -
T Consensus 249 ~L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~ 328 (383)
T 2abs_A 249 HLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAE 328 (383)
T ss_dssp HHHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGG
T ss_pred HHhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcC
Confidence 998753 110000 23456677777763 2 5556667743 34555 55555555321 1
Q ss_pred CCCCCCCchHHHHHHHHHHHhccCChHHHHHH
Q 016016 294 SPRRCGGQGDILSGSVAVFLSWARAKGKATTR 325 (396)
Q Consensus 294 ~~~~t~GTGDvLAGiIAa~LA~g~~l~~A~~~ 325 (396)
....++|+||.|++.+.+.+..|.++++|+..
T Consensus 329 ~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~ 360 (383)
T 2abs_A 329 KIVDTNGAGDAFVGGFLYALSQGKTVKQCIMC 360 (383)
T ss_dssp GCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CcCcCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 23369999998888888888899999888763
No 54
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=98.78 E-value=3.2e-08 Score=96.82 Aligned_cols=151 Identities=13% Similarity=0.144 Sum_probs=99.3
Q ss_pred HHHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHHHH
Q 016016 167 DKWMERFDCLVVGP-GLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRL 241 (396)
Q Consensus 167 ~~~~~~~dalvIG~-Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a~L 241 (396)
.+.++.++++++.. -+..+. +.+.++++.+++.++++++|+.......... ++++ ..++|+||..|+..|
T Consensus 157 ~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l 231 (347)
T 3otx_A 157 VRAMDESRIFYFSGFTLTVDV---NHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLP--YTDIIVANRHEAKEF 231 (347)
T ss_dssp HHHHHHCSEEEEEGGGGGTCH---HHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHH
T ss_pred HHHHhhCCEEEEeeeecccCH---HHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHh--hCCEEecCHHHHHHH
Confidence 45567899999962 111133 3566777777888999999997532211111 2332 368999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHH-----hhCCeEEEEc-CC-ceEEEcCCeEEEEeccC----CCCCCCCchHHHHHHHH
Q 016016 242 VQKVLNCEVNDRDAPELLQSLAK-----QIGGVTILQK-GK-SDLISDGEIAKSVSIYG----SPRRCGGQGDILSGSVA 310 (396)
Q Consensus 242 ~g~~~~~~~~~~d~~~~a~~La~-----~~g~vvVllK-G~-~dvI~d~~~~~~i~~~G----~~~~t~GTGDvLAGiIA 310 (396)
++... .+..+..+.+++|.+ +.++..|++| |. +.++.+++..+.+...- ....++|+||.|+|.+.
T Consensus 232 ~~~~~---~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l 308 (347)
T 3otx_A 232 ANMMK---WDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFL 308 (347)
T ss_dssp HHHHT---CCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHH
T ss_pred hcccC---CCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHH
Confidence 98641 223567788888874 2344455555 44 35666666655553211 22369999998888888
Q ss_pred HHHhccCChHHHHHH
Q 016016 311 VFLSWARAKGKATTR 325 (396)
Q Consensus 311 a~LA~g~~l~~A~~~ 325 (396)
+.+.+|.++++|+..
T Consensus 309 ~~l~~g~~l~~a~~~ 323 (347)
T 3otx_A 309 SAYAVGKDLRRCCET 323 (347)
T ss_dssp HHHTTTCCHHHHHHH
T ss_pred HHHHcCCCHHHHHHH
Confidence 888899999888763
No 55
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=98.77 E-value=2.7e-08 Score=98.52 Aligned_cols=152 Identities=14% Similarity=0.144 Sum_probs=98.2
Q ss_pred HHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccch----hhhcCCCCeeecCCHHHHHHH
Q 016016 166 VDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRL 241 (396)
Q Consensus 166 v~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~----~ll~~~~~~VITPN~~E~a~L 241 (396)
+.+.+..+|+++++ |.... ...+.+.++++.+++.++++++|+.+........ ++++ .+++|+||..|+..|
T Consensus 170 ~~~~~~~~~~v~i~-G~~~~-~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l 245 (365)
T 3loo_A 170 NRAYLQGAQFFYVS-GFFFT-VSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFP--YVDVLFGNETEAIAL 245 (365)
T ss_dssp HHHHHHHCSEEEEE-GGGHH-HHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHH
T ss_pred hHHHHhhCCEEEEe-eeecc-CCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHH--hCCEEecCHHHHHHH
Confidence 34556789999996 22111 1134667777878888999999997543221111 2332 379999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHh-----hCCeEEEEc-CC-ceEEE--cCCeEEEEeccC----CCCCCCCchHHHHHH
Q 016016 242 VQKVLNCEVNDRDAPELLQSLAKQ-----IGGVTILQK-GK-SDLIS--DGEIAKSVSIYG----SPRRCGGQGDILSGS 308 (396)
Q Consensus 242 ~g~~~~~~~~~~d~~~~a~~La~~-----~g~vvVllK-G~-~dvI~--d~~~~~~i~~~G----~~~~t~GTGDvLAGi 308 (396)
++... .+.++..+.+++|.+. .++..|++| |. +.++. +++..+.+...- ....++|.||.|+|.
T Consensus 246 ~g~~~---~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag 322 (365)
T 3loo_A 246 AKEFN---YGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGG 322 (365)
T ss_dssp HHHTT---CCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHH
T ss_pred hcccC---CCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHH
Confidence 98641 2335677888888753 144445555 43 45666 666655554222 123699999988888
Q ss_pred HHHHHhccCChHHHHH
Q 016016 309 VAVFLSWARAKGKATT 324 (396)
Q Consensus 309 IAa~LA~g~~l~~A~~ 324 (396)
+.+.+.+|.++++|+.
T Consensus 323 fl~~l~~g~~l~~a~~ 338 (365)
T 3loo_A 323 FLAQLLQSRTVDVCIK 338 (365)
T ss_dssp HHHHHHTTCCHHHHHH
T ss_pred HHHHHHCCCCHHHHHH
Confidence 7788889999988876
No 56
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=98.71 E-value=9.4e-08 Score=91.90 Aligned_cols=143 Identities=15% Similarity=0.087 Sum_probs=90.7
Q ss_pred HhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc--hhhhcC-CC-CeeecCCHHHHHHHh
Q 016016 169 WMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS--IDLVSG-YP-LAVLTPNVNEYKRLV 242 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~-~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~--~~ll~~-~~-~~VITPN~~E~a~L~ 242 (396)
+++.+|+++++.-.. .++...+.+.++++.+++.++++++||.... +.... .+.+++ ++ .++|+||..|+..|+
T Consensus 122 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 201 (309)
T 1v1a_A 122 YLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLF 201 (309)
T ss_dssp GGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHH
T ss_pred HhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHh
Confidence 456889998863221 1344456677788888888999999997532 22100 112221 23 689999999999998
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEec-cCCCCCCCCchHHHHHHHHHHHhccCCh
Q 016016 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSI-YGSPRRCGGQGDILSGSVAVFLSWARAK 319 (396)
Q Consensus 243 g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~-~G~~~~t~GTGDvLAGiIAa~LA~g~~l 319 (396)
|.+ .+.++ +.++..|++|.+ +.++..++..+.+.. ......++|+||.|++.+.+.+..|.++
T Consensus 202 g~~----------~~~~~----~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~ 267 (309)
T 1v1a_A 202 GRV----------EEALR----ALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPV 267 (309)
T ss_dssp SSH----------HHHHH----HTCCSEEEEECGGGCEEEEETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred CCH----------HHHHH----hcCCCEEEEEecCCCeeEecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCCH
Confidence 742 12232 456656777743 334433244444431 1122369999998888888888899999
Q ss_pred HHHHHH
Q 016016 320 GKATTR 325 (396)
Q Consensus 320 ~~A~~~ 325 (396)
++|+..
T Consensus 268 ~~a~~~ 273 (309)
T 1v1a_A 268 EERLRL 273 (309)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
No 57
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=98.70 E-value=1.1e-08 Score=100.33 Aligned_cols=147 Identities=15% Similarity=0.077 Sum_probs=92.5
Q ss_pred hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc---hhhhcC-C-CCeeecCCHHHHHHHhc
Q 016016 170 MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-Y-PLAVLTPNVNEYKRLVQ 243 (396)
Q Consensus 170 ~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~---~~ll~~-~-~~~VITPN~~E~a~L~g 243 (396)
+..+|+++++.....+....+.+.++++.+++.++++++||.... +.... .+.+++ + .+++|+||..|+..|+|
T Consensus 139 l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g 218 (339)
T 1tyy_A 139 FRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSG 218 (339)
T ss_dssp CCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHC
T ss_pred hccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhC
Confidence 467899998643223444445677778888888999999997432 22110 112221 2 36899999999999988
Q ss_pred ccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhcc----
Q 016016 244 KVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWA---- 316 (396)
Q Consensus 244 ~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g---- 316 (396)
.. +..+.+++|.+ .++..|++|.+ +.++.+++..+.+... .....++|+||.|++.+.+.+..|
T Consensus 219 ~~--------~~~~~~~~l~~-~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~ 289 (339)
T 1tyy_A 219 AS--------HWQDARYYLRD-LGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWD 289 (339)
T ss_dssp CS--------SGGGGSSTTGG-GTCSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCC
T ss_pred CC--------CHHHHHHHHHH-cCCCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhccccc
Confidence 53 12234445543 45445566643 3566666665555321 222369999998888888888886
Q ss_pred -CChHHHHHH
Q 016016 317 -RAKGKATTR 325 (396)
Q Consensus 317 -~~l~~A~~~ 325 (396)
.++++|+..
T Consensus 290 ~~~l~~a~~~ 299 (339)
T 1tyy_A 290 HALLAEAISN 299 (339)
T ss_dssp HHHHHHHHHH
T ss_pred cccHHHHHHH
Confidence 677777663
No 58
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=98.68 E-value=4.6e-08 Score=94.96 Aligned_cols=141 Identities=18% Similarity=0.177 Sum_probs=89.0
Q ss_pred HhccCCEEEEcCCCC---CCHHHHHHHHHHHHHhhcCCCCEEEecC-cccccccch---hhhcCCCCeeecCCHHHHHHH
Q 016016 169 WMERFDCLVVGPGLG---RDPYLLECVSEIMKHARQSNVPIVIDGD-GLFLVTNSI---DLVSGYPLAVLTPNVNEYKRL 241 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~---~~~~~~~~v~~~l~~a~~~~~PvVLDpd-gl~ll~~~~---~ll~~~~~~VITPN~~E~a~L 241 (396)
.+..++.+.+..-+. .+. +.+.++++.+++.+ .+++|+. ...+..... ++++ ..++|+||..|+..|
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l 205 (325)
T 3h49_A 132 RFSQAKLLSLASIFNSPLLDG---KALTEIFTQAKARQ-MIICADMIKPRLNETLDDICEALS--YVDYLFPNFAEAKLL 205 (325)
T ss_dssp GGGGCSEEEEEEETTSTTSCH---HHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHT--TCSEEECBHHHHHHH
T ss_pred hhccCCEEEEecccCCcccCH---HHHHHHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHh--hCCEEecCHHHHHHH
Confidence 356789888862111 122 24556666666677 5777753 222221111 2222 368999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEeccC--CCCCCCCchHHHHHHHHHHHhccC
Q 016016 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIYG--SPRRCGGQGDILSGSVAVFLSWAR 317 (396)
Q Consensus 242 ~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~G--~~~~t~GTGDvLAGiIAa~LA~g~ 317 (396)
+|.. +..+.++.|.+ +++..|++|.+ +.++.+++..+.+...- ....++|+||.|+|.+.+.+..|.
T Consensus 206 ~g~~--------~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~ 276 (325)
T 3h49_A 206 TGKE--------TLDEIADCFLA-CGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGK 276 (325)
T ss_dssp HTCS--------SHHHHHHHHHT-TTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred hCCC--------CHHHHHHHHHH-cCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCC
Confidence 8743 34456666654 56555666633 45666666666664211 233799999988888888888999
Q ss_pred ChHHHHH
Q 016016 318 AKGKATT 324 (396)
Q Consensus 318 ~l~~A~~ 324 (396)
++++|+.
T Consensus 277 ~~~~a~~ 283 (325)
T 3h49_A 277 NLRECAR 283 (325)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9988876
No 59
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=98.68 E-value=2.2e-08 Score=97.08 Aligned_cols=162 Identities=14% Similarity=0.141 Sum_probs=98.0
Q ss_pred HHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccc-hhhhcCCCCeeecCCHHHHHHHhccc
Q 016016 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS-IDLVSGYPLAVLTPNVNEYKRLVQKV 245 (396)
Q Consensus 167 ~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~-~~ll~~~~~~VITPN~~E~a~L~g~~ 245 (396)
.+.++.+|++++...+ ..+ .+.++++.+++.++++++||.....+... .++++ ..++|+||..|+..|++.
T Consensus 138 ~~~l~~~~~v~~~~~~--~~~---~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~ll~--~~dil~~N~~Ea~~l~g~- 209 (310)
T 3go6_A 138 PSAVANCDVLLTQLEI--PVA---TALAAARAAQSADAVVMVNASPAGQDRSSLQDLAA--IADVVIANEHEANDWPSP- 209 (310)
T ss_dssp TTTTTTCSEEEECSSS--CHH---HHHHHHHHHHHTTCEEEEECCSSSCCHHHHHHHHH--HCSEEEEEHHHHHHSSSC-
T ss_pred HHHhhcCCEEEECCCC--CHH---HHHHHHHHHHHcCCEEEEcCCccccchHHHHHHHh--hCCEEEeCHHHHHHHhCC-
Confidence 4456789999997432 322 45566667777899999999844322111 02332 368999999999999752
Q ss_pred ccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhc----cCC
Q 016016 246 LNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSW----ARA 318 (396)
Q Consensus 246 ~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~----g~~ 318 (396)
. ..|++| |. +.++++++..+.+... -....++|+||.|+|.+.+.+.. |.+
T Consensus 210 --------------------~--~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~ 267 (310)
T 3go6_A 210 --------------------P--THFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE 267 (310)
T ss_dssp --------------------C--SEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH
T ss_pred --------------------C--CEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC
Confidence 1 234445 33 3466666666666421 22236999999888877777777 888
Q ss_pred hHHHHHHHhhhhhhHhhhhhHhh--HHHHHhHHHHHHHHHHHhhhhccC
Q 016016 319 KGKATTRLYYNLSFKLGRQLFCF--LSLISCLATYSFLMRLLQSDESNG 365 (396)
Q Consensus 319 l~~A~~~~y~~~~~~aai~~~~~--~~~a~~~a~~~~~~~~~~~~~~~~ 365 (396)
+++|+..+ .+.++.+. .|-...+-..+|+.++++..++|+
T Consensus 268 l~~a~~~A-------~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~~~~ 309 (310)
T 3go6_A 268 RLRALRRA-------CAAGALATLVSGVGDCAPAAAAIDAALRANRHNG 309 (310)
T ss_dssp HHHHHHHH-------HHHHHHHTTSSCSTTCCCCHHHHHHHHHTC----
T ss_pred HHHHHHHH-------HHHHHHHhCCCCCCCCCCCHHHHHHHHHhccCCC
Confidence 87776522 22222221 111123456788999999998886
No 60
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=98.64 E-value=4.2e-07 Score=88.73 Aligned_cols=138 Identities=12% Similarity=0.056 Sum_probs=86.6
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcC-CC-CeeecCCHHHHHHHhcccc
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-YP-LAVLTPNVNEYKRLVQKVL 246 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~-~~-~~VITPN~~E~a~L~g~~~ 246 (396)
.++.+|+++++... .+ .+.++++.+++.++++++||.....+-. .+.+++ ++ .++|+||..|+..|+|...
T Consensus 145 ~l~~~~~v~~~~~~---~~---~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~l~~~l~~~dil~~N~~E~~~l~g~~~ 217 (334)
T 2pkf_A 145 AIGKPELVIIGAND---PE---AMFLHTEECRKLGLAFAADPSQQLARLS-GEEIRRLVNGAAYLFTNDYEWDLLLSKTG 217 (334)
T ss_dssp HHCSCSEEEEESCC---HH---HHHHHHHHHHHHTCCEEEECGGGGGTSC-HHHHHTTTTTCSEEEEEHHHHHHHHHHHC
T ss_pred hhcCCCEEEEcCCC---hH---HHHHHHHHHHhcCCeEEEeccchhhhhh-HHHHHHHHhcCCEEecCHHHHHHHhccCC
Confidence 34789999986422 22 4455666666778999999975321111 122222 33 6999999999999988541
Q ss_pred cCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCe-EEEEeccC-CC-CCCCCchHHHHHHHHHHHhccCChHH
Q 016016 247 NCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEI-AKSVSIYG-SP-RRCGGQGDILSGSVAVFLSWARAKGK 321 (396)
Q Consensus 247 ~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~-~~~i~~~G-~~-~~t~GTGDvLAGiIAa~LA~g~~l~~ 321 (396)
. +. +++.+... .|++|.+ +.++.+++. .+.+...- .. ..++|+||.+++.+.+.+.+|.++++
T Consensus 218 ----~--~~----~~l~~~~~--~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~~~~ 285 (334)
T 2pkf_A 218 ----W--SE----ADVMAQID--LRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLER 285 (334)
T ss_dssp ----C--CH----HHHHTTCS--CEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred ----C--CH----HHHHhcCC--EEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 1 11 22333333 3455633 355666555 55554222 22 37999999888888888889999998
Q ss_pred HHHH
Q 016016 322 ATTR 325 (396)
Q Consensus 322 A~~~ 325 (396)
|+..
T Consensus 286 a~~~ 289 (334)
T 2pkf_A 286 SAQL 289 (334)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8773
No 61
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=98.62 E-value=8.4e-08 Score=92.08 Aligned_cols=134 Identities=12% Similarity=0.056 Sum_probs=86.9
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccc---hhhhcCCCCeeecCCHHHHHHHhccccc
Q 016016 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS---IDLVSGYPLAVLTPNVNEYKRLVQKVLN 247 (396)
Q Consensus 171 ~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~---~~ll~~~~~~VITPN~~E~a~L~g~~~~ 247 (396)
..+|+++++... + +.+.++++.+++.+ ++++||......... .++++ ..++|+||..|+..|+|...
T Consensus 129 ~~~~~v~~~~~~---~---~~~~~~~~~a~~~g-~v~~D~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~~- 198 (302)
T 2c4e_A 129 FNTEIVHIATGD---P---EFNLKCAKKAYGNN-LVSFDPGQDLPQYSKEMLLEIIE--HTNFLFMNKHEFERASNLLN- 198 (302)
T ss_dssp CCEEEEEECSSC---H---HHHHHHHHHHBTTB-EEEECCGGGGGGCCHHHHHHHHH--TCSEEEEEHHHHHHHHHHHT-
T ss_pred ccCCEEEEeCCC---c---HHHHHHHHHHHhcC-CEEEeCchhhhhhhHHHHHHHHh--cCCEEEcCHHHHHHHhCCCC-
Confidence 467888886432 2 35566777777788 999999842111001 12232 36899999999999988541
Q ss_pred CCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CC-CCCCCCchHHHHHHHHHHHhccCChHHHH
Q 016016 248 CEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GS-PRRCGGQGDILSGSVAVFLSWARAKGKAT 323 (396)
Q Consensus 248 ~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~-~~~t~GTGDvLAGiIAa~LA~g~~l~~A~ 323 (396)
.+ + + +|.+. ...|++|.+ +.++++++..+.+... .. ...++|+||.|++.+.+.+..|.++++|+
T Consensus 199 ---~~-~----~-~l~~~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~ 267 (302)
T 2c4e_A 199 ---FE-I----D-DYLER--VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCG 267 (302)
T ss_dssp ---CC-H----H-HHHTT--CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ---cc-H----H-HHHhc--CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 11 1 1 45444 335666644 3566666555555422 22 34699999999888888889999999887
Q ss_pred HH
Q 016016 324 TR 325 (396)
Q Consensus 324 ~~ 325 (396)
..
T Consensus 268 ~~ 269 (302)
T 2c4e_A 268 LI 269 (302)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 62
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=98.60 E-value=1.3e-07 Score=90.98 Aligned_cols=144 Identities=13% Similarity=0.108 Sum_probs=90.3
Q ss_pred HhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc---hhhhcC-C-CCe--eecCCHHHHH
Q 016016 169 WMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-Y-PLA--VLTPNVNEYK 239 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~-~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~---~~ll~~-~-~~~--VITPN~~E~a 239 (396)
+++.+|++.++.-.. .++...+.+.++++.+++. ++||.... +.... .+.+++ + ..+ +|+||..|+.
T Consensus 125 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~ 200 (313)
T 2v78_A 125 YVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTK 200 (313)
T ss_dssp HHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHH
T ss_pred HhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHH
Confidence 356889998852111 0233345566667665433 99997532 22100 012221 2 368 9999999999
Q ss_pred HHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhcc
Q 016016 240 RLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWA 316 (396)
Q Consensus 240 ~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG~--~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g 316 (396)
.|+|.. +..+.+++|.+ +++..|++|.+ +.++.+++..+.+... .....++|+||.|++.+.+.+..|
T Consensus 201 ~l~g~~--------~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g 271 (313)
T 2v78_A 201 ILLDVT--------DPDEAYRKYKE-LGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQG 271 (313)
T ss_dssp HHHSCC--------CHHHHHHHHHH-TTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred HHhCCC--------CHHHHHHHHHh-CCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcC
Confidence 998742 45567778876 56656677743 3455566665555321 122369999998888888888899
Q ss_pred CChHHHHHH
Q 016016 317 RAKGKATTR 325 (396)
Q Consensus 317 ~~l~~A~~~ 325 (396)
.++++|+..
T Consensus 272 ~~~~~a~~~ 280 (313)
T 2v78_A 272 KDIEYSLAH 280 (313)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999988763
No 63
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=98.59 E-value=1e-07 Score=91.99 Aligned_cols=175 Identities=14% Similarity=0.051 Sum_probs=99.3
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccch----hhhcC-C-CCeeecCCHHHHHHH
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNSI----DLVSG-Y-PLAVLTPNVNEYKRL 241 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~~----~ll~~-~-~~~VITPN~~E~a~L 241 (396)
.++.++.+.++.=+.......+.+.++++.++ .++++++||.... +..... +.+++ + ..++++||..|+..|
T Consensus 121 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l 199 (313)
T 3ewm_A 121 IVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYL 199 (313)
T ss_dssp HHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHH
T ss_pred HhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHH
Confidence 34678888886322222222456677777776 4689999996432 222110 12221 2 368999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEec-cCCCCCCCCchHHHHHHHHHHHh--cc
Q 016016 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSI-YGSPRRCGGQGDILSGSVAVFLS--WA 316 (396)
Q Consensus 242 ~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~-~G~~~~t~GTGDvLAGiIAa~LA--~g 316 (396)
.+... .. .+..+|++| |. +.+++++++.+.+.. ......++|+||.|+|.+.+.+. .|
T Consensus 200 ~~~~~----~~-------------~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g 262 (313)
T 3ewm_A 200 ENQGV----EV-------------KGSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKG 262 (313)
T ss_dssp HTTTC----CC-------------CCSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSS
T ss_pred hccCc----cc-------------cCceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCC
Confidence 87531 11 012233445 33 356666666665542 12233699999987777777776 89
Q ss_pred CChHHHHHHHhhhhhhHhhhhhHhh--HHHHHhHHHHHHHHHHHhhhhccCceee
Q 016016 317 RAKGKATTRLYYNLSFKLGRQLFCF--LSLISCLATYSFLMRLLQSDESNGVGLH 369 (396)
Q Consensus 317 ~~l~~A~~~~y~~~~~~aai~~~~~--~~~a~~~a~~~~~~~~~~~~~~~~~~~~ 369 (396)
.++++|+..+- +.++.+. .|.. .+-..+++.++++...++.-|-|
T Consensus 263 ~~l~~a~~~A~-------~~aa~~v~~~G~~-~~p~~~ev~~~l~~~~~~~~~~~ 309 (313)
T 3ewm_A 263 LDLLKLGKFAN-------LVAALSTQKRGAW-STPRKDELLKYKEAREVLAEGHH 309 (313)
T ss_dssp CCHHHHHHHHH-------HHHHHHTTSCSSC-CCCCHHHHTTSHHHHHHHC----
T ss_pred CCHHHHHHHHH-------HHHHHHHccCCCC-CCCCHHHHHHHHHHHHHHhcccc
Confidence 99998876332 1221111 1111 24456778788777777766654
No 64
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=98.59 E-value=1.4e-07 Score=90.49 Aligned_cols=138 Identities=17% Similarity=0.191 Sum_probs=85.5
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-c-----c--cc--c-hhhhcCCCCeeecCCHHHHH
Q 016016 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-L-----V--TN--S-IDLVSGYPLAVLTPNVNEYK 239 (396)
Q Consensus 171 ~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-l-----l--~~--~-~~ll~~~~~~VITPN~~E~a 239 (396)
..++++.++. +...+ ...++++.+++.++++++||.+.. . . .. . .++++ ..++|+||..|+.
T Consensus 118 ~~~~~v~~~~-~~~~~----~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~ 190 (298)
T 1vk4_A 118 IEGEAVHINP-LWYGE----FPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK--YLDLFKVDSREAE 190 (298)
T ss_dssp CCSSEEEECC-SSTTS----SCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG--GCSEEEEEHHHHH
T ss_pred CCCCEEEECC-ccccc----ccHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcc--cCCEEecCHHHHH
Confidence 4688999874 32111 112233444456889999997521 0 0 00 0 12332 3689999999999
Q ss_pred HHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcC-CceEEEcCCeEEEEeccC-CCCCCCCchHHHHHHHHHHHhc-c
Q 016016 240 RLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKG-KSDLISDGEIAKSVSIYG-SPRRCGGQGDILSGSVAVFLSW-A 316 (396)
Q Consensus 240 ~L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllKG-~~dvI~d~~~~~~i~~~G-~~~~t~GTGDvLAGiIAa~LA~-g 316 (396)
.|+|.. +..+.++.|.+ +++..|++|. .+.+++++ ..+.+...- ....++|+||.|+|.+.+.+.. |
T Consensus 191 ~l~g~~--------~~~~~~~~l~~-~g~~~vvvT~~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g 260 (298)
T 1vk4_A 191 TLTGTN--------DLRESCRIIRS-FGAKIILATHASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKK 260 (298)
T ss_dssp HHHSCS--------CHHHHHHHHHH-TTCSSEEEEETTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSC
T ss_pred HHhCCC--------CHHHHHHHHHh-cCCCEEEEEcCCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcC
Confidence 998742 45667777765 4543445553 34566666 555553211 1126999999888888888888 9
Q ss_pred CChHHHHHH
Q 016016 317 RAKGKATTR 325 (396)
Q Consensus 317 ~~l~~A~~~ 325 (396)
.++++|+..
T Consensus 261 ~~~~~a~~~ 269 (298)
T 1vk4_A 261 MSIEKATKF 269 (298)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999888763
No 65
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=98.58 E-value=4.2e-07 Score=88.52 Aligned_cols=135 Identities=15% Similarity=0.145 Sum_probs=84.8
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc--hhhhcCCCCeeecCCHHHHHHHhccccc
Q 016016 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS--IDLVSGYPLAVLTPNVNEYKRLVQKVLN 247 (396)
Q Consensus 171 ~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~--~~ll~~~~~~VITPN~~E~a~L~g~~~~ 247 (396)
..+|+++++.- ..+ .+.++++.+++.++++++||.... +.... .++++ ..++|+||..|+..|+|...
T Consensus 134 ~~~~~v~~~~~---~~~---~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~--~~dil~~N~~Ea~~l~g~~~- 204 (326)
T 3b1n_A 134 KDIKLAIVGPD---GFQ---GMVQHTEELAQAGVPFIFDPGQGLPLFDGATLRRSIE--LATYIAVNDYEAKLVCDKTG- 204 (326)
T ss_dssp CSCSEEEECSC---CHH---HHHHHHHHHHHHTCCEEECCGGGGGGCCHHHHHHHHH--HCSEEEEEHHHHHHHHHHHC-
T ss_pred cCCCEEEECCc---cHH---HHHHHHHHHHHCCCEEEEeCchhhhhccHHHHHHHHH--hCCEEecCHHHHHHHhCCCC-
Confidence 67899998642 222 445566666777899999996432 11110 12332 26899999999999987531
Q ss_pred CCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEeccC-CC-CCCCCchHHHHHHHHHHHhccCChHHHH
Q 016016 248 CEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIYG-SP-RRCGGQGDILSGSVAVFLSWARAKGKAT 323 (396)
Q Consensus 248 ~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~G-~~-~~t~GTGDvLAGiIAa~LA~g~~l~~A~ 323 (396)
. +. +++.+. ...|++| |. +.++.+++..+.+...- .+ ..++|+||.|++.+.+.+..|.++++|+
T Consensus 205 ---~--~~----~~l~~~--~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~~~~a~ 273 (326)
T 3b1n_A 205 ---W--SE----DEIASR--VQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAG 273 (326)
T ss_dssp ---C--CH----HHHHTT--SSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ---C--CH----HHHHhc--CCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 1 11 123333 2345556 33 45666666665554222 22 3699999988888888888999999887
Q ss_pred HH
Q 016016 324 TR 325 (396)
Q Consensus 324 ~~ 325 (396)
..
T Consensus 274 ~~ 275 (326)
T 3b1n_A 274 RL 275 (326)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 66
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=98.46 E-value=5.3e-07 Score=86.60 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=89.7
Q ss_pred HhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc------hhhhcCCCCeeecCCHHHHHH
Q 016016 169 WMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS------IDLVSGYPLAVLTPNVNEYKR 240 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~-~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~------~~ll~~~~~~VITPN~~E~a~ 240 (396)
+++.+|++.++.-.. .++...+.+.++++.+++. ++||.... +.... .++++....++|+||..|+..
T Consensus 125 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~ 200 (311)
T 2dcn_A 125 YVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKI 200 (311)
T ss_dssp HHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHH
T ss_pred HHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHH
Confidence 457899998852111 1233345666777766433 99997532 22100 122221136899999999999
Q ss_pred HhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEecc-CCCCCCCCchHHHHHHHHHHHhccC
Q 016016 241 LVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIY-GSPRRCGGQGDILSGSVAVFLSWAR 317 (396)
Q Consensus 241 L~g~~~~~~~~~~d~~~~a~~La~~~g~vvVllK-G~-~dvI~d~~~~~~i~~~-G~~~~t~GTGDvLAGiIAa~LA~g~ 317 (396)
|+|.. +..+.+++|.+. ...|++| |. +.++.+++..+.+... .....++|+||.|++.+.+.+..|.
T Consensus 201 l~g~~--------~~~~~~~~l~~~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~ 270 (311)
T 2dcn_A 201 ILGES--------DPDKAAKAFSDY--AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGF 270 (311)
T ss_dssp HHSCC--------CHHHHHHHHTTT--EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTC
T ss_pred HhCCC--------CHHHHHHHHHHh--CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCC
Confidence 98742 455677777654 4455566 33 4566666665555421 2223699999998888888889999
Q ss_pred ChHHHHHH
Q 016016 318 AKGKATTR 325 (396)
Q Consensus 318 ~l~~A~~~ 325 (396)
++++|+..
T Consensus 271 ~~~~a~~~ 278 (311)
T 2dcn_A 271 EMEKALDY 278 (311)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99988774
No 67
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=98.27 E-value=1.4e-05 Score=77.07 Aligned_cols=137 Identities=13% Similarity=0.102 Sum_probs=82.1
Q ss_pred hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcC--------CCCEEEecCcccccccchhhhcCCCCeeecCCHHHHHHH
Q 016016 170 MERFDCLVVGPGLGRDPYLLECVSEIMKHARQS--------NVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNEYKRL 241 (396)
Q Consensus 170 ~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~--------~~PvVLDpdgl~ll~~~~~ll~~~~~~VITPN~~E~a~L 241 (396)
++.+|+++++. . ..+ .+.++++.+++. ++++++|+.... ....++++ ..++|+||..|+..|
T Consensus 144 l~~~~~v~~~~-~--~~~---~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~--~~~~~~l~--~~dil~~n~~ea~~l 213 (312)
T 2hlz_A 144 LTQFKWIHIEG-R--NAS---EQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPR--EELFQLFG--YGDVVFVSKDVAKHL 213 (312)
T ss_dssp GGGEEEEEEEC-S--SHH---HHHHHHHHHHHHHTTSCGGGCCEEEEEECSCC--GGGGGGGG--SSSEEEECHHHHHHT
T ss_pred hccCCEEEEec-c--CHH---HHHHHHHHHHHhcccccCCCCeEEEEEcccch--HHHHHHHh--cCCEEEEcHHHHHHc
Confidence 46788999863 2 222 223333333333 678999986421 10112333 368999999999887
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCC-eEEEEc-CC-ceEEEcC-CeEEEEecc-C-CCCCCCCchHHHHHHHHHHHhc
Q 016016 242 VQKVLNCEVNDRDAPELLQSLAKQIGG-VTILQK-GK-SDLISDG-EIAKSVSIY-G-SPRRCGGQGDILSGSVAVFLSW 315 (396)
Q Consensus 242 ~g~~~~~~~~~~d~~~~a~~La~~~g~-vvVllK-G~-~dvI~d~-~~~~~i~~~-G-~~~~t~GTGDvLAGiIAa~LA~ 315 (396)
|. .+..+.++.+.+..+. ..|++| |. +.++.++ +..+.+... - ....++|+||.|++.+.+.+..
T Consensus 214 -g~--------~~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~ 284 (312)
T 2hlz_A 214 -GF--------QSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQ 284 (312)
T ss_dssp -TC--------CSHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHT
T ss_pred -CC--------CCHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHc
Confidence 42 1344566666554431 345555 33 3455553 334455321 1 2236999999888888888889
Q ss_pred cCChHHHHHH
Q 016016 316 ARAKGKATTR 325 (396)
Q Consensus 316 g~~l~~A~~~ 325 (396)
|.++++|+..
T Consensus 285 g~~~~~a~~~ 294 (312)
T 2hlz_A 285 GRSVQEALRF 294 (312)
T ss_dssp TCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999888763
No 68
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=98.25 E-value=2.4e-06 Score=83.46 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=85.6
Q ss_pred HHHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHhhcCCCCEEEecCccc-ccccc--hhhhcC-CC-CeeecCCHHHHHH
Q 016016 167 DKWMERFDCLVVGP-GLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS--IDLVSG-YP-LAVLTPNVNEYKR 240 (396)
Q Consensus 167 ~~~~~~~dalvIG~-Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~-ll~~~--~~ll~~-~~-~~VITPN~~E~a~ 240 (396)
.++++.++.+.++. -+..++...+.+.++++.+++.++++++||.--. +.... .+.+.+ ++ .++++||..|+..
T Consensus 145 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~ 224 (351)
T 4gm6_A 145 SELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVA 224 (351)
T ss_dssp HHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHH
T ss_pred HHHHhhcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHH
Confidence 44567788888751 1112344456777888889999999999996322 11111 122222 23 6899999999999
Q ss_pred HhcccccCCCCCCcHHHHHHHHHHhhCCe-----EEEEcCC---ceEEEcCCeEEEEec-c-CCCCCCCCchHHHHHHHH
Q 016016 241 LVQKVLNCEVNDRDAPELLQSLAKQIGGV-----TILQKGK---SDLISDGEIAKSVSI-Y-GSPRRCGGQGDILSGSVA 310 (396)
Q Consensus 241 L~g~~~~~~~~~~d~~~~a~~La~~~g~v-----vVllKG~---~dvI~d~~~~~~i~~-~-G~~~~t~GTGDvLAGiIA 310 (396)
|++.. .+..+..+...+........ .++..+. ...+...+..+...+ . .....++|.||.+.|.+.
T Consensus 225 l~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l 300 (351)
T 4gm6_A 225 FFEIS----SETTDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVL 300 (351)
T ss_dssp TSCCC----TTCSCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHH
T ss_pred HhCCC----CchhHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHH
Confidence 98854 22234433333322211100 1111111 112333333333321 1 122369999997666655
Q ss_pred HHHhccCChHHHHHH
Q 016016 311 VFLSWARAKGKATTR 325 (396)
Q Consensus 311 a~LA~g~~l~~A~~~ 325 (396)
+-+..|.++++|+..
T Consensus 301 ~~l~~g~~~~~al~~ 315 (351)
T 4gm6_A 301 HGILSEWRPDETVKF 315 (351)
T ss_dssp HHHHTTCCHHHHHHH
T ss_pred HHHHCCCCHHHHHHH
Confidence 566789999988774
No 69
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=98.23 E-value=7.5e-06 Score=81.11 Aligned_cols=155 Identities=12% Similarity=0.032 Sum_probs=94.0
Q ss_pred HHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcC-C-CCeeecCCHHHHHHHhc
Q 016016 166 VDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-Y-PLAVLTPNVNEYKRLVQ 243 (396)
Q Consensus 166 v~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~-~-~~~VITPN~~E~a~L~g 243 (396)
+.+.++.++.+.+.. ...+ ...+.+.++++.+++.++++++|+..........+.+.+ + ..++|+||..|+..|++
T Consensus 174 ~~~~i~~a~~~~~~g-~~~~-~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~ 251 (372)
T 3uq6_A 174 VWSLVEKAQVYYIAG-FVIN-TCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGE 251 (372)
T ss_dssp HHHHHHHCSEEEEEG-GGHH-HHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHH
T ss_pred HHHHhhcccEEEEec-cccc-ccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhC
Confidence 445567889998863 3322 234566777888888999999999765443322222211 1 36899999999999987
Q ss_pred ccccCCCCCCcHHHHHHHHHHh------hCCeEEEEc-CCc-eEEEcCCe--EEEEe-ccC---CCCCCCCchHHHHHHH
Q 016016 244 KVLNCEVNDRDAPELLQSLAKQ------IGGVTILQK-GKS-DLISDGEI--AKSVS-IYG---SPRRCGGQGDILSGSV 309 (396)
Q Consensus 244 ~~~~~~~~~~d~~~~a~~La~~------~g~vvVllK-G~~-dvI~d~~~--~~~i~-~~G---~~~~t~GTGDvLAGiI 309 (396)
... ..+++..+.++.+++. .++.+|++| |.. .++.+++. +..+. +.- ....|+|.||.|+|-+
T Consensus 252 ~~~---~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agf 328 (372)
T 3uq6_A 252 VHG---LLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGF 328 (372)
T ss_dssp HTT---CCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred CCC---CchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHH
Confidence 541 2334566677777652 122234444 443 34444332 11221 111 1125899999777665
Q ss_pred HHHHhccCChHHHHHH
Q 016016 310 AVFLSWARAKGKATTR 325 (396)
Q Consensus 310 Aa~LA~g~~l~~A~~~ 325 (396)
.+-+.+|.++++|+..
T Consensus 329 l~~l~~g~~l~~a~~~ 344 (372)
T 3uq6_A 329 IADYIRGKPMITSLHA 344 (372)
T ss_dssp HHHHTTTCCHHHHHHH
T ss_pred HHHHHcCCCHHHHHHH
Confidence 5667789999988763
No 70
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=98.21 E-value=3.5e-06 Score=81.30 Aligned_cols=127 Identities=13% Similarity=0.108 Sum_probs=76.9
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcC-C-CCeeecCCHHHHHHHhcccccC
Q 016016 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-Y-PLAVLTPNVNEYKRLVQKVLNC 248 (396)
Q Consensus 171 ~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~-~-~~~VITPN~~E~a~L~g~~~~~ 248 (396)
..+|+++++... .+.++++.+++ ++++||... +.....+.++. + ..++|+||..|+..|+|...
T Consensus 139 ~~~~~v~~~~~~--------~~~~~~~~a~~---~v~~D~~~~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~-- 204 (306)
T 3bf5_A 139 DEYEYVHFSTGP--------NYLDMAKSIRS---KIIFDPSQE-IHKYSKDELKKFHEISYMSIFNDHEYRVFREMTG-- 204 (306)
T ss_dssp SCEEEEEECSSS--------SHHHHHHHCCS---EEEECCGGG-GGGSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHC--
T ss_pred CCCCEEEECChH--------HHHHHHHHhCC---cEEEcCchh-hhhccHHHHHHHHhcCCEEEcCHHHHHHHhCCCC--
Confidence 567888887533 23445555543 899999842 21111112211 2 36899999999999988541
Q ss_pred CCCCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEec-cCCCCCCCCchHHHHHHHHHHHhccCChHHHHHH
Q 016016 249 EVNDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSI-YGSPRRCGGQGDILSGSVAVFLSWARAKGKATTR 325 (396)
Q Consensus 249 ~~~~~d~~~~a~~La~~~g~vvVllKG~~dvI~d~~~~~~i~~-~G~~~~t~GTGDvLAGiIAa~LA~g~~l~~A~~~ 325 (396)
.++ . ++- ++|-....+.++.+++..+.+.. ... ..++|+||.|++.+.+.+..|.++++|+..
T Consensus 205 -~~~-~----------~l~-vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~ 268 (306)
T 3bf5_A 205 -LSS-P----------KVT-TIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRSIEKGMIY 268 (306)
T ss_dssp -CSS-C----------SSC-EEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred -cCc-c----------cEE-EEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCCHHHHHHH
Confidence 111 1 111 33222223455556666555542 223 579999998888888888899999888763
No 71
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=57.06 E-value=70 Score=29.10 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=26.8
Q ss_pred CeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCc
Q 016016 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (396)
Q Consensus 86 G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~ 123 (396)
-+|+++|. +|.|...+..-.+.|.+-+++.-...
T Consensus 32 ~~VlVvG~----Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGL----GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECC----SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEee----CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 47999986 77777777777788999999887654
No 72
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=56.19 E-value=47 Score=33.83 Aligned_cols=126 Identities=13% Similarity=0.175 Sum_probs=64.2
Q ss_pred cChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchh----h---hcccCCce
Q 016016 63 ADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAP----V---IKSYSPEL 135 (396)
Q Consensus 63 ~~~~~~~~~~lp~r~~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~----~---i~~~~PE~ 135 (396)
++.+|+++.. ..+++.|-..|++.+.++ -+.....+..+.+.+..|++.|.+.+...... . ++...|+.
T Consensus 198 IT~~DIl~~~---~~p~a~~d~~grL~v~aa-vG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~ 273 (496)
T 4fxs_A 198 ITAKDFHKAE---SKPNACKDEQGRLRVGAA-VGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHL 273 (496)
T ss_dssp ECCC-----C---CCTTCCBCTTSCBCCEEE-CCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTC
T ss_pred ehHhHHHHhh---cccchhhhcccceeeeee-eccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCc
Confidence 3444554332 234555666677666554 23344456666777888999999987754321 1 22333443
Q ss_pred e--eecccccccccCCCchhhhhhcchhHHHHHHHHhccCCEEEEcCCCCCC----------HHHHHHHHHHHHHhhcCC
Q 016016 136 I--VHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRD----------PYLLECVSEIMKHARQSN 203 (396)
Q Consensus 136 ~--~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dalvIG~Gl~~~----------~~~~~~v~~~l~~a~~~~ 203 (396)
. ...+ .+.+..+.+.+ ..+|+++++.|-+.. ......+.++.+.+++.+
T Consensus 274 ~Vi~g~v-----------------~t~e~a~~l~~--aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~ 334 (496)
T 4fxs_A 274 EIIGGNV-----------------ATAEGARALIE--AGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYG 334 (496)
T ss_dssp CEEEEEE-----------------CSHHHHHHHHH--HTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGT
T ss_pred eEEEccc-----------------CcHHHHHHHHH--hCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCC
Confidence 2 2111 11122223322 368999996433321 112345556665555667
Q ss_pred CCEEEecC
Q 016016 204 VPIVIDGD 211 (396)
Q Consensus 204 ~PvVLDpd 211 (396)
+|+|-|..
T Consensus 335 iPVIa~GG 342 (496)
T 4fxs_A 335 IPVIADGG 342 (496)
T ss_dssp CCEEEESC
T ss_pred CeEEEeCC
Confidence 88887764
No 73
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=52.09 E-value=1.4e+02 Score=30.11 Aligned_cols=114 Identities=17% Similarity=0.259 Sum_probs=58.5
Q ss_pred CCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchh----h---hcccCCce-eeec-ccccccccC
Q 016016 78 PSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAP----V---IKSYSPEL-IVHP-ILEESYNIS 148 (396)
Q Consensus 78 ~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~----~---i~~~~PE~-~~~~-~~~~~~~~~ 148 (396)
+++-|-..|++.+-++. +........+.+.+..|++++.+.+...... . +....|+. +..+ +
T Consensus 208 p~a~kd~~grl~v~aav-G~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v-------- 278 (490)
T 4avf_A 208 PLASKDEQGRLRVGAAV-GTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNI-------- 278 (490)
T ss_dssp TTCCBCTTSCBCCEEEE-CSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEE--------
T ss_pred cchhhhccCcceeeeee-ccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeee--------
Confidence 44555556665554331 1233445556677778999999877654322 1 22334442 2111 1
Q ss_pred CCchhhhhhcchhHHHHHHHHhccCCEEEEcCCCCCC----------HHHHHHHHHHHHHhhcCCCCEEEecC
Q 016016 149 GLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRD----------PYLLECVSEIMKHARQSNVPIVIDGD 211 (396)
Q Consensus 149 ~~~~~~~~~is~~~~~ev~~~~~~~dalvIG~Gl~~~----------~~~~~~v~~~l~~a~~~~~PvVLDpd 211 (396)
.+.+..+.+.+ ..+|++++|.|-+.. ....+.+.++.+.+++.++|+|-|..
T Consensus 279 ---------~t~e~a~~l~~--aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GG 340 (490)
T 4avf_A 279 ---------ATAEAAKALAE--AGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGG 340 (490)
T ss_dssp ---------CSHHHHHHHHH--TTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESC
T ss_pred ---------CcHHHHHHHHH--cCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCC
Confidence 11122223322 368999996443321 11234555665555556788887654
No 74
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=49.01 E-value=20 Score=33.79 Aligned_cols=81 Identities=15% Similarity=0.191 Sum_probs=50.2
Q ss_pred hHHHHHHHHhccCCEEEEc-CCCCCC------HHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCC----Ce
Q 016016 161 KILAEVDKWMERFDCLVVG-PGLGRD------PYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYP----LA 229 (396)
Q Consensus 161 ~~~~ev~~~~~~~dalvIG-~Gl~~~------~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~----~~ 229 (396)
+.++++++++....++.|| +|+... +.+.+.+...++.|.+.++||++=.... .....+++++++ ..
T Consensus 78 ~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a--~~~~l~il~~~~~~~~~~ 155 (287)
T 3rcm_A 78 DSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDA--SERLLAILKDYRDHLTGA 155 (287)
T ss_dssp THHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHTTGGGCSCE
T ss_pred HHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCc--HHHHHHHHHHcCCCCCeE
Confidence 4557788888888899998 666531 2356678888888888999999955321 111113444321 12
Q ss_pred e---ecCCHHHHHHHhc
Q 016016 230 V---LTPNVNEYKRLVQ 243 (396)
Q Consensus 230 V---ITPN~~E~a~L~g 243 (396)
| .|++..|+.++..
T Consensus 156 V~H~fsG~~e~a~~~l~ 172 (287)
T 3rcm_A 156 VVHCFTGEREALFAYLD 172 (287)
T ss_dssp EECSCCCCHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHH
Confidence 3 3666666666654
No 75
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=48.10 E-value=2.1e+02 Score=29.06 Aligned_cols=126 Identities=17% Similarity=0.236 Sum_probs=60.8
Q ss_pred cChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchh----h---hcccCCc-
Q 016016 63 ADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAP----V---IKSYSPE- 134 (396)
Q Consensus 63 ~~~~~~~~~~lp~r~~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~----~---i~~~~PE- 134 (396)
++.+|+++.+. .+++.|-..|++.+.++. +.....+....+.+..|++.+.+.+...... . +....|+
T Consensus 223 IT~~Dil~~~~---~p~a~~D~~~rl~V~aav-g~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~ 298 (511)
T 3usb_A 223 ITIKDIEKVIE---FPNSAKDKQGRLLVGAAV-GVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSL 298 (511)
T ss_dssp EEHHHHHHHHH---CTTCCBCTTSCBCCEEEE-CSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTS
T ss_pred ccHHHHHHhhh---cccchhhhccceeeeeee-eeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCc
Confidence 34455555432 133344444444333321 1122334445566777999999987753211 1 2233354
Q ss_pred -eeeecccccccccCCCchhhhhhcchhHHHHHHHHhccCCEEEEcCCCCCC----------HHHHHHHHHHHHHhhcCC
Q 016016 135 -LIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRD----------PYLLECVSEIMKHARQSN 203 (396)
Q Consensus 135 -~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ev~~~~~~~dalvIG~Gl~~~----------~~~~~~v~~~l~~a~~~~ 203 (396)
++...+. +.+....+.+ ..+|++++|.|-+.. ......+.++.+.+++.+
T Consensus 299 ~vi~g~v~-----------------t~e~a~~~~~--aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~ 359 (511)
T 3usb_A 299 NIIAGNVA-----------------TAEATKALIE--AGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHG 359 (511)
T ss_dssp EEEEEEEC-----------------SHHHHHHHHH--HTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTT
T ss_pred eEEeeeec-----------------cHHHHHHHHH--hCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCC
Confidence 2222211 1112222322 368999997544320 112345555555555667
Q ss_pred CCEEEecC
Q 016016 204 VPIVIDGD 211 (396)
Q Consensus 204 ~PvVLDpd 211 (396)
+|+|.|.-
T Consensus 360 iPVIa~GG 367 (511)
T 3usb_A 360 IPVIADGG 367 (511)
T ss_dssp CCEEEESC
T ss_pred CcEEEeCC
Confidence 88888874
No 76
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=46.69 E-value=52 Score=34.24 Aligned_cols=115 Identities=16% Similarity=0.162 Sum_probs=64.2
Q ss_pred CCCCC-CCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchhh-------hcccCCceeeecccccccccCC
Q 016016 78 PSKHK-GQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPV-------IKSYSPELIVHPILEESYNISG 149 (396)
Q Consensus 78 ~~~hK-g~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~~-------i~~~~PE~~~~~~~~~~~~~~~ 149 (396)
|++.| -..|++.+-+. -+..+....-+.+-..+|++++.+.++...... ++...|++.+.. .
T Consensus 259 p~A~k~d~~grL~VgAA-Vgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~via---G------ 328 (556)
T 4af0_A 259 PYASKVPESKQLYCGAA-IGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIA---G------ 328 (556)
T ss_dssp TTCCBCTTTCCBCCEEE-ECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEE---E------
T ss_pred CcchhcchhhceeeEEE-eccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEe---c------
Confidence 44555 33444333222 223444555555667789999999988655432 334445543221 0
Q ss_pred CchhhhhhcchhHHHHHHHHh-ccCCEEEEcCCCCC----------CHHHHHHHHHHHHHhhcCCCCEEEecC
Q 016016 150 LEDEERRCISSKILAEVDKWM-ERFDCLVVGPGLGR----------DPYLLECVSEIMKHARQSNVPIVIDGD 211 (396)
Q Consensus 150 ~~~~~~~~is~~~~~ev~~~~-~~~dalvIG~Gl~~----------~~~~~~~v~~~l~~a~~~~~PvVLDpd 211 (396)
.-.+.+ ...+++ .-+|++.+|+|-+. ...++..+.+..+.+++.++|||-|.-
T Consensus 329 ------NVaT~e---~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGG 392 (556)
T 4af0_A 329 ------NVVTRE---QAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGG 392 (556)
T ss_dssp ------EECSHH---HHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESC
T ss_pred ------cccCHH---HHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCC
Confidence 011222 233332 36899999976542 112345666777777888999999974
No 77
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=41.11 E-value=1e+02 Score=26.91 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=23.9
Q ss_pred HHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEE
Q 016016 164 AEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIV 207 (396)
Q Consensus 164 ~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvV 207 (396)
+.+.+.++.+|+++.+.|.. +.. .....+++.+++.+.+-|
T Consensus 80 ~~~~~~~~~~D~vv~~a~~~-~~~--~~~~~~~~~~~~~~~~~i 120 (236)
T 3qvo_A 80 AALKQAMQGQDIVYANLTGE-DLD--IQANSVIAAMKACDVKRL 120 (236)
T ss_dssp HHHHHHHTTCSEEEEECCST-THH--HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHhcCCCEEEEcCCCC-chh--HHHHHHHHHHHHcCCCEE
Confidence 45666778899999887653 221 123445555555565433
No 78
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=38.70 E-value=42 Score=30.17 Aligned_cols=52 Identities=12% Similarity=0.156 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhccCCEEEEc-CCCCC-----C-HHHHHHHHHHHHHhhcCCCCEEEecC
Q 016016 160 SKILAEVDKWMERFDCLVVG-PGLGR-----D-PYLLECVSEIMKHARQSNVPIVIDGD 211 (396)
Q Consensus 160 ~~~~~ev~~~~~~~dalvIG-~Gl~~-----~-~~~~~~v~~~l~~a~~~~~PvVLDpd 211 (396)
++.++++++++....++.|| +|+.. . ..+.+.+...++.+.+.++||++=..
T Consensus 75 ~~~~~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~ 133 (264)
T 1xwy_A 75 AATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCR 133 (264)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcC
Confidence 34567788887777787777 44432 1 23345677778888888999999763
No 79
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=36.47 E-value=2.2e+02 Score=25.05 Aligned_cols=43 Identities=19% Similarity=0.214 Sum_probs=23.3
Q ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHH--HhhcCCCCEE-EecCcc
Q 016016 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMK--HARQSNVPIV-IDGDGL 213 (396)
Q Consensus 168 ~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~--~a~~~~~PvV-LDpdgl 213 (396)
.+++.+|++++=|| ..-+++.+.+++. +....++|+| ++.++.
T Consensus 104 ~m~~~sda~IalPG---G~GTLdElfe~lt~~qlg~~~kPvvlln~~gf 149 (189)
T 3sbx_A 104 VMEDRANAFITLPG---GVGTLDELLDVWTEGYLGMHDKSIVVLDPWGH 149 (189)
T ss_dssp HHHHHCSEEEECSC---CHHHHHHHHHHHHHHHTTSCCCCEEEECTTCT
T ss_pred HHHHHCCEEEEeCC---CcchHHHHHHHHHHHHhcccCCCEEEecCCcc
Confidence 34567899888664 2333333433332 2334577875 566553
No 80
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=34.96 E-value=1.4e+02 Score=27.92 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=19.1
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEe
Q 016016 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVID 209 (396)
Q Consensus 171 ~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLD 209 (396)
.+.|+++|.+ + +..-.+....++ +.+++|+++
T Consensus 71 ~~vD~V~I~t--P-~~~H~~~~~~al----~aGkhVl~E 102 (312)
T 3o9z_A 71 EGVDYLSIAS--P-NHLHYPQIRMAL----RLGANALSE 102 (312)
T ss_dssp CCCSEEEECS--C-GGGHHHHHHHHH----HTTCEEEEC
T ss_pred CCCcEEEECC--C-chhhHHHHHHHH----HCCCeEEEE
Confidence 5789999964 2 333333444333 567777765
No 81
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=34.69 E-value=2.6e+02 Score=25.25 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=25.9
Q ss_pred CCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCc
Q 016016 85 AGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (396)
Q Consensus 85 ~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~ 123 (396)
.-+|+++|- +|.+-..+..-.+.|.+-+++.-...
T Consensus 28 ~~~VlvvG~----GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGL----GGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECC----STTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEcc----CHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 348888875 67777777777788999999885543
No 82
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=34.64 E-value=2e+02 Score=25.25 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=22.1
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHH--HhhcCCCCEEE-ecCc
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMK--HARQSNVPIVI-DGDG 212 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~--~a~~~~~PvVL-Dpdg 212 (396)
++..+|++++=|| ..-+++.+.+++. +..+.++|+|| +.++
T Consensus 94 ~~~~sda~IvlPG---G~GTl~El~e~lt~~q~g~~~kPvvll~~~g 137 (191)
T 1t35_A 94 MSELADGFISMPG---GFGTYEELFEVLCWAQIGIHQKPIGLYNVNG 137 (191)
T ss_dssp HHHHCSEEEECSC---CHHHHHHHHHHHHTTSCSSCCCCEEEECGGG
T ss_pred HHHHCCEEEEeCC---CccHHHHHHHHHHHHHhCCCCCCEEEecCCc
Confidence 4456899888664 2344444444432 11235678764 5544
No 83
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=34.51 E-value=2.1e+02 Score=24.79 Aligned_cols=123 Identities=17% Similarity=0.061 Sum_probs=58.2
Q ss_pred CCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCcchhhhcccCCceeeecccccccccCCCchhhhhhcchhHHH
Q 016016 85 AGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILA 164 (396)
Q Consensus 85 ~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~~~~~i~~~~PE~~~~~~~~~~~~~~~~~~~~~~~is~~~~~ 164 (396)
+|..++.||. ..|-=-.+..+|+..|...+ .+.|+...........+.+...... .. +
T Consensus 44 ~g~~lVsGGg--~~Gim~aa~~gAl~~gG~ti-gVlP~~~~~~~~~~~~~~i~~~~~~---------~R----------k 101 (176)
T 2iz6_A 44 HGWILLTGGR--SLGVMHEAMKGAKEAGGTTI-GVLPGPDTSEISDAVDIPIVTGLGS---------AR----------D 101 (176)
T ss_dssp TTCEEEEECS--SSSHHHHHHHHHHHTTCCEE-EEECC-----CCTTCSEEEECCCCS---------SS----------C
T ss_pred CCCEEEECCC--ccCHhHHHHHHHHHcCCEEE-EEeCchhhhhhccCCceeEEcCCHH---------HH----------H
Confidence 4888999982 14443344557777765433 3346432222222223333322111 00 0
Q ss_pred HHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcC--CCCeeecCCHHHHHHHh
Q 016016 165 EVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG--YPLAVLTPNVNEYKRLV 242 (396)
Q Consensus 165 ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~--~~~~VITPN~~E~a~L~ 242 (396)
.-++..+|++++=|| ..-+++.+.+++ +.++||++=+. -. . ...+++. ....++..++.|+...+
T Consensus 102 --~~m~~~sda~IvlpG---g~GTL~E~~~al----~~~kpV~~l~~-~~-~--~~gfi~~~~~~~i~~~~~~~e~~~~l 168 (176)
T 2iz6_A 102 --NINALSSNVLVAVGM---GPGTAAEVALAL----KAKKPVVLLGT-QP-E--AEKFFTSLDAGLVHVAADVAGAIAAV 168 (176)
T ss_dssp --CCCGGGCSEEEEESC---CHHHHHHHHHHH----HTTCCEEEESC-CH-H--HHHHHHHHCTTTEEEESSHHHHHHHH
T ss_pred --HHHHHhCCEEEEecC---CccHHHHHHHHH----HhCCcEEEEcC-cc-c--ccccCChhhcCeEEEcCCHHHHHHHH
Confidence 113456788888665 234444444443 46889877664 11 1 1123321 23456777777765543
No 84
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=34.26 E-value=2.2e+02 Score=28.91 Aligned_cols=41 Identities=12% Similarity=0.276 Sum_probs=22.3
Q ss_pred HHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHh-----hcCCCCEEE-ec
Q 016016 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHA-----RQSNVPIVI-DG 210 (396)
Q Consensus 167 ~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a-----~~~~~PvVL-Dp 210 (396)
..++..+|++++=|| ...+++.+.+++... +..++|+|| +|
T Consensus 240 ~~mv~~SDAfIaLPG---G~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~ 286 (460)
T 3bq9_A 240 EAFVRCAHGIVIFPG---GAGTAEELLYLLGILMHPDNQRQSLPVILTGP 286 (460)
T ss_dssp HHHHHHCSEEEECSC---SHHHHHHHHHHHHHHTSGGGTTCCCCEEEEEC
T ss_pred HHHHHhCCEEEEcCC---CcchHHHHHHHHHHHhhccccCCCCCEEEEec
Confidence 345667899888664 233344444444321 115778765 64
No 85
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=33.54 E-value=2.2e+02 Score=24.20 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=25.8
Q ss_pred HHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEec
Q 016016 164 AEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDG 210 (396)
Q Consensus 164 ~ev~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDp 210 (396)
+++.+.++.+|+++.+.|.. +.. ...+++.+++.+.+-|+-.
T Consensus 65 ~~~~~~~~~~d~vv~~ag~~-n~~----~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 65 GXLEQAVTNAEVVFVGAMES-GSD----MASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHHHHHTTCSEEEESCCCC-HHH----HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHcCCCEEEEcCCCC-Chh----HHHHHHHHHhcCCCeEEEE
Confidence 45666678899999988754 322 4455555555665544433
No 86
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=32.61 E-value=1.5e+02 Score=27.65 Aligned_cols=32 Identities=3% Similarity=0.117 Sum_probs=19.4
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEe
Q 016016 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVID 209 (396)
Q Consensus 171 ~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLD 209 (396)
.+.|+++|.+ + +..-.+....++ +.+++|+++
T Consensus 72 ~~vD~V~I~t--P-~~~H~~~~~~al----~aGkhVl~E 103 (318)
T 3oa2_A 72 TALDYVSICS--P-NYLHYPHIAAGL----RLGCDVICE 103 (318)
T ss_dssp TSCCEEEECS--C-GGGHHHHHHHHH----HTTCEEEEC
T ss_pred CCCcEEEECC--C-cHHHHHHHHHHH----HCCCeEEEE
Confidence 5789999964 2 333333444333 467788877
No 87
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=32.41 E-value=86 Score=27.29 Aligned_cols=19 Identities=21% Similarity=0.379 Sum_probs=13.9
Q ss_pred HHHHhccCCEEEEcCCCCC
Q 016016 166 VDKWMERFDCLVVGPGLGR 184 (396)
Q Consensus 166 v~~~~~~~dalvIG~Gl~~ 184 (396)
+.+.+..+|+++-+.|...
T Consensus 78 ~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 78 FSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp CGGGGTTCSEEEECCCCCT
T ss_pred HHHHHcCCCEEEECCCCCC
Confidence 3445578999999988764
No 88
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=32.31 E-value=45 Score=32.16 Aligned_cols=81 Identities=14% Similarity=0.182 Sum_probs=50.7
Q ss_pred HHHHHHHHhcc--CCEEEEc-CCCCCC-------HHHHHHHHHHHHHhhc-CCCCEEEecCcccccccchhhhcCCC---
Q 016016 162 ILAEVDKWMER--FDCLVVG-PGLGRD-------PYLLECVSEIMKHARQ-SNVPIVIDGDGLFLVTNSIDLVSGYP--- 227 (396)
Q Consensus 162 ~~~ev~~~~~~--~dalvIG-~Gl~~~-------~~~~~~v~~~l~~a~~-~~~PvVLDpdgl~ll~~~~~ll~~~~--- 227 (396)
.++++++++.. ..++.|| +||... +.+.+.+...++.|++ .++||||=..... ..-.+++++++
T Consensus 116 ~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~--~d~l~iL~~~~~~~ 193 (325)
T 3ipw_A 116 YLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSW--SDLCQLNKELGYNG 193 (325)
T ss_dssp HHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCH--HHHHHHHHHTTCTT
T ss_pred HHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCchH--HHHHHHHHhcCCCC
Confidence 45677777654 3789998 666521 3556788888888999 9999999764221 11113443221
Q ss_pred -Cee---ecCCHHHHHHHhcc
Q 016016 228 -LAV---LTPNVNEYKRLVQK 244 (396)
Q Consensus 228 -~~V---ITPN~~E~a~L~g~ 244 (396)
..| .|++..++.+++..
T Consensus 194 ~~gViH~FsGs~e~a~~~l~l 214 (325)
T 3ipw_A 194 CKGVVHCFDGTEEEMNQILNE 214 (325)
T ss_dssp SCEEECSCCCCHHHHHHHHHT
T ss_pred CcEEEEECCCCHHHHHHHHhc
Confidence 122 57778888887643
No 89
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=31.24 E-value=3.1e+02 Score=25.68 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=25.8
Q ss_pred CCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCc
Q 016016 84 QAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (396)
Q Consensus 84 ~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~ 123 (396)
..-+|++||- +|-|-..+..-.++|.|-++++-...
T Consensus 35 ~~~~VlVvGa----GGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGV----GGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECC----SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECc----CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4558999975 66666666666667888898887654
No 90
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=31.11 E-value=57 Score=29.12 Aligned_cols=52 Identities=21% Similarity=0.312 Sum_probs=34.1
Q ss_pred hhHHHHHHHHhcc--CCEEEEc-CCCCC------CHHHHHHHHHHHHHhhcCCCCEEEecC
Q 016016 160 SKILAEVDKWMER--FDCLVVG-PGLGR------DPYLLECVSEIMKHARQSNVPIVIDGD 211 (396)
Q Consensus 160 ~~~~~ev~~~~~~--~dalvIG-~Gl~~------~~~~~~~v~~~l~~a~~~~~PvVLDpd 211 (396)
++.++++++++.. ..++.|| +|+.. ...+.+.+...++.+.+.++||++=..
T Consensus 75 ~~~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~ 135 (259)
T 1zzm_A 75 DVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSR 135 (259)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 3455677776654 5667775 44431 133455777778888889999999774
No 91
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=31.03 E-value=2.8e+02 Score=24.58 Aligned_cols=41 Identities=24% Similarity=0.261 Sum_probs=22.4
Q ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHH--HhhcCCCCEE-EecCc
Q 016016 169 WMERFDCLVVGPGLGRDPYLLECVSEIMK--HARQSNVPIV-IDGDG 212 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~~~~~~~~v~~~l~--~a~~~~~PvV-LDpdg 212 (396)
+++.+|++++=|| ..-+++.+.+++. +....++|+| ++.++
T Consensus 114 m~~~sda~IalPG---G~GTldEl~e~lt~~qlg~~~kPvvlln~~g 157 (199)
T 3qua_A 114 MEHRSDAFIALPG---GIGTLEEFFEAWTAGYLGMHDKPLILLDPFG 157 (199)
T ss_dssp HHHHCSEEEECSC---CHHHHHHHHHHHHHHHTTSCCCCEEEECTTS
T ss_pred HHHhcCccEEeCC---CccHHHHHHHHHHHHHhccCCCCEEEEcCCc
Confidence 4567899888664 2333333433332 2234567875 46655
No 92
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=30.60 E-value=1.3e+02 Score=28.18 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=24.4
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEecC
Q 016016 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGD 211 (396)
Q Consensus 171 ~~~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDpd 211 (396)
..+|.+|++||+..+.. .+ +.+++.++|++=++.
T Consensus 65 ~~~d~vV~Spgi~~~~p---~~----~~a~~~gi~v~~~~e 98 (326)
T 3eag_A 65 FKADVYVIGNVAKRGMD---VV----EAILNLGLPYISGPQ 98 (326)
T ss_dssp CCCSEEEECTTCCTTCH---HH----HHHHHTTCCEEEHHH
T ss_pred CCCCEEEECCCcCCCCH---HH----HHHHHcCCcEEeHHH
Confidence 36899999999986533 12 234567999887775
No 93
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=30.49 E-value=2.9e+02 Score=24.50 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=27.2
Q ss_pred HHHHHHhccCCEEEEcCCCCCCH-HHHHHHHHHHHHhhcCCCC
Q 016016 164 AEVDKWMERFDCLVVGPGLGRDP-YLLECVSEIMKHARQSNVP 205 (396)
Q Consensus 164 ~ev~~~~~~~dalvIG~Gl~~~~-~~~~~v~~~l~~a~~~~~P 205 (396)
+.+.+.++.+|+++...|..... ...+....+++.+++.+++
T Consensus 57 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~ 99 (289)
T 3e48_A 57 ESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVA 99 (289)
T ss_dssp HHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCC
Confidence 45666778899999988775432 2233445666666666765
No 94
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=29.48 E-value=1.4e+02 Score=29.57 Aligned_cols=33 Identities=21% Similarity=0.505 Sum_probs=22.1
Q ss_pred cc-CCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEec
Q 016016 171 ER-FDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDG 210 (396)
Q Consensus 171 ~~-~dalvIG~Gl~~~~~~~~~v~~~l~~a~~~~~PvVLDp 210 (396)
.. +|.+|++||+..+... + +.+++.++|++=++
T Consensus 70 ~~~~d~vv~spgi~~~~p~---~----~~a~~~gi~v~~~~ 103 (451)
T 3lk7_A 70 DEDFCYMIKNPGIPYNNPM---V----KKALEKQIPVLTEV 103 (451)
T ss_dssp GSCEEEEEECTTSCTTSHH---H----HHHHHTTCCEECHH
T ss_pred cCCCCEEEECCcCCCCChh---H----HHHHHCCCcEEeHH
Confidence 45 8999999999865331 2 23345678877555
No 95
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=27.51 E-value=1.6e+02 Score=28.48 Aligned_cols=38 Identities=8% Similarity=0.071 Sum_probs=29.3
Q ss_pred CCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCc
Q 016016 82 KGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (396)
Q Consensus 82 Kg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~ 123 (396)
|-..-+|++||- +|.|-..+..-.+.|.|-++++-...
T Consensus 31 kL~~~~VlIvGa----GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGA----GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECC----SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHhCCEEEEECC----CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 444568999976 78888888888888999999875543
No 96
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=26.84 E-value=68 Score=31.95 Aligned_cols=51 Identities=20% Similarity=0.190 Sum_probs=36.5
Q ss_pred hHHHHHHHHh------ccCCEEEEc-CCCCCC-------HHHHHHHHHHHHHhhcC----CCCEEEecC
Q 016016 161 KILAEVDKWM------ERFDCLVVG-PGLGRD-------PYLLECVSEIMKHARQS----NVPIVIDGD 211 (396)
Q Consensus 161 ~~~~ev~~~~------~~~dalvIG-~Gl~~~-------~~~~~~v~~~l~~a~~~----~~PvVLDpd 211 (396)
+.++++.+++ ....++.|| +||... +.+.+.+..-++.|.+. +.||+|=..
T Consensus 136 ~~l~~L~~l~~~~~~~~~~~vvAIGEiGLDy~~~~~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R 204 (401)
T 3e2v_A 136 GKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMR 204 (401)
T ss_dssp HHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCTTTSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEE
T ss_pred HHHHHHHHHHHhhhhccCCcEEEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEec
Confidence 3456666665 356799999 777531 34567788888888889 999999653
No 97
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=26.47 E-value=4.5e+02 Score=26.59 Aligned_cols=73 Identities=19% Similarity=0.280 Sum_probs=35.1
Q ss_pred HHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHh--h---cCCCCEEE-ec---Cccc--ccccchhhhcC--CC-Ceeec
Q 016016 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHA--R---QSNVPIVI-DG---DGLF--LVTNSIDLVSG--YP-LAVLT 232 (396)
Q Consensus 167 ~~~~~~~dalvIG~Gl~~~~~~~~~v~~~l~~a--~---~~~~PvVL-Dp---dgl~--ll~~~~~ll~~--~~-~~VIT 232 (396)
..+++.+|++++=|| ...+++.+.+++.-. . ...+|+|| ++ ++.. ++..-...+.+ .. ..+++
T Consensus 242 ~~mv~~SDAfIaLPG---G~GTLEELfE~LTw~qLgtgk~h~kPIVLln~~~~~gYwd~Ll~fL~~~v~eg~~~~~~iv~ 318 (462)
T 3gh1_A 242 EAFVRMAHGIIIFPG---GPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSLDKFITDTLGEAARKHYSIAI 318 (462)
T ss_dssp HHHHHHCSEEEECSC---SHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHHCGGGGGGCEEEE
T ss_pred HHHHHHCCEEEEcCC---CcchHHHHHHHHHHHhcccCcCCCCCEEEEcCCCcccHHHHHHHHHHHHhhhhhhhccEEEc
Confidence 345667899888654 233344444443321 1 24578765 65 2321 11110111111 11 24577
Q ss_pred CCHHHHHHHh
Q 016016 233 PNVNEYKRLV 242 (396)
Q Consensus 233 PN~~E~a~L~ 242 (396)
.++.|+...+
T Consensus 319 DdpeEvl~~i 328 (462)
T 3gh1_A 319 DNPAEAARIM 328 (462)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 8888877665
No 98
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=26.25 E-value=2.2e+02 Score=27.52 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=21.4
Q ss_pred CCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEE
Q 016016 85 AGKIAVIGGCREYTGAPYFAAISALKIGADLSHVF 119 (396)
Q Consensus 85 ~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~ 119 (396)
.-+|+++|| +.-+..-..++.+.|.-.+.+.
T Consensus 24 ~~~I~ilGg----G~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGG----GQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCEEEEECC----SHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECC----CHHHHHHHHHHHHCCCEEEEEE
Confidence 358999998 3345555667778887666555
No 99
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=25.08 E-value=2.1e+02 Score=21.26 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=13.6
Q ss_pred HHHHHHhccCCEEEEcCCC
Q 016016 164 AEVDKWMERFDCLVVGPGL 182 (396)
Q Consensus 164 ~ev~~~~~~~dalvIG~Gl 182 (396)
+.+.+.+..+|+++...|.
T Consensus 61 ~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 61 AGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp HHHHHHTTTCSEEEECSCG
T ss_pred HHHHHHHcCCCEEEECCCc
Confidence 3455666789999987754
No 100
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=24.61 E-value=3.1e+02 Score=23.06 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=24.6
Q ss_pred HhccCCEEEEcCCCCC----CHHHHHHHHHHHHHhhcCCCCEEEe
Q 016016 169 WMERFDCLVVGPGLGR----DPYLLECVSEIMKHARQSNVPIVID 209 (396)
Q Consensus 169 ~~~~~dalvIG~Gl~~----~~~~~~~v~~~l~~a~~~~~PvVLD 209 (396)
.+..+|+++-..|... .....+....+++.+++.+..+|+=
T Consensus 59 ~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 59 DLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp HHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred hcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 3468899998887741 1223445556666666666445543
No 101
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=24.48 E-value=3.8e+02 Score=23.94 Aligned_cols=27 Identities=26% Similarity=0.176 Sum_probs=16.2
Q ss_pred CCeEEEEecCCCCCCcHHHH--HHHHhhcCCCEE
Q 016016 85 AGKIAVIGGCREYTGAPYFA--AISALKIGADLS 116 (396)
Q Consensus 85 ~G~vlvIgGSd~~~GA~ilA--alaAlr~GaglV 116 (396)
+|..++.|| . -|++. ..+|+..|.-.+
T Consensus 68 ~g~~lVsGG---g--~GiM~aa~~gAl~~gG~~i 96 (217)
T 1wek_A 68 AGFGVVTGG---G--PGVMEAVNRGAYEAGGVSV 96 (217)
T ss_dssp HTCEEEECS---C--SHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEeCC---h--hhHHHHHHHHHHHcCCCEE
Confidence 477888887 2 34544 457777764333
No 102
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=24.41 E-value=1.8e+02 Score=30.65 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=33.1
Q ss_pred hCCCCCCCCCCCCCCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCc
Q 016016 72 ITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (396)
Q Consensus 72 ~lp~r~~~~hKg~~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~ 123 (396)
++|..+- .|-..-+|++||- +|.|-..+..-.++|+|-++++-...
T Consensus 315 llp~~g~--ekL~~arVLIVGa----GGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 315 ILPDLNL--DIIKNTKVLLLGA----GTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCTTCCH--HHHHTCEEEEECC----SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hcchhhH--HHHhCCeEEEECC----CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4554332 2445669999986 78888777777788999999987654
No 103
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=24.22 E-value=1.5e+02 Score=28.43 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=26.4
Q ss_pred CCeEEEEecCCCCCCcHHHHHHHHhhcCCCEEEEEecCc
Q 016016 85 AGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (396)
Q Consensus 85 ~G~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv~t~~~ 123 (396)
.-+|++||- +|.+-..+..-.++|.|-++++-...
T Consensus 118 ~~~VlvvG~----GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGC----GGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECC----SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECC----CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 458999975 67776666666777999999987654
No 104
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=23.82 E-value=95 Score=28.10 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=34.3
Q ss_pred hHHHHHHHHhccCCEEEEc-CCCCC----C--HHHHHHHHHHHHHhhcCCCCEEEecC
Q 016016 161 KILAEVDKWMERFDCLVVG-PGLGR----D--PYLLECVSEIMKHARQSNVPIVIDGD 211 (396)
Q Consensus 161 ~~~~ev~~~~~~~dalvIG-~Gl~~----~--~~~~~~v~~~l~~a~~~~~PvVLDpd 211 (396)
+.++++++++....++.|| .|+.. + ....+.+...++.+.+.++||++=+.
T Consensus 84 ~~~~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~ 141 (268)
T 1j6o_A 84 DFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIR 141 (268)
T ss_dssp THHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 4457788877666677776 33321 1 33455677778888889999999874
No 105
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=23.42 E-value=44 Score=30.96 Aligned_cols=44 Identities=20% Similarity=0.323 Sum_probs=32.4
Q ss_pred HHhccCCEEEEc-CCCCCC-HHHHHHHHHHHHHhhcCCCCEEEecC
Q 016016 168 KWMERFDCLVVG-PGLGRD-PYLLECVSEIMKHARQSNVPIVIDGD 211 (396)
Q Consensus 168 ~~~~~~dalvIG-~Gl~~~-~~~~~~v~~~l~~a~~~~~PvVLDpd 211 (396)
+.+....++.|| +|+... +.+.+.+...++.+++.++||++=..
T Consensus 86 ~~l~~~~vvaIGEiGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r 131 (261)
T 3guw_A 86 GYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTP 131 (261)
T ss_dssp HHHTTSCCSCEEEEECSSCCHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHhCcCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEEEcC
Confidence 334446788888 787643 45567788888888899999999764
No 106
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.00 E-value=3.4e+02 Score=22.89 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=24.6
Q ss_pred HHHHHHhccCCEEEEcCCCCCCHH-----HHHHHHHHHHHhhcCCCCEE
Q 016016 164 AEVDKWMERFDCLVVGPGLGRDPY-----LLECVSEIMKHARQSNVPIV 207 (396)
Q Consensus 164 ~ev~~~~~~~dalvIG~Gl~~~~~-----~~~~v~~~l~~a~~~~~PvV 207 (396)
+.+.+.++.+|+++-..|...+.. -......+++.+.+.+++-+
T Consensus 59 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 107 (227)
T 3dhn_A 59 DEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRF 107 (227)
T ss_dssp HHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 456667788999998877653211 12344455566666665433
No 107
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=21.18 E-value=3.7e+02 Score=22.65 Aligned_cols=21 Identities=24% Similarity=0.403 Sum_probs=16.2
Q ss_pred HHHHHHhccCCEEEEcCCCCC
Q 016016 164 AEVDKWMERFDCLVVGPGLGR 184 (396)
Q Consensus 164 ~ev~~~~~~~dalvIG~Gl~~ 184 (396)
+.+.+.++.+|+++-..|...
T Consensus 55 ~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 55 EEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp HHHHTTTTTCSEEEECCCCTT
T ss_pred HHHHHHHcCCCEEEECCcCCC
Confidence 456667788999999887653
No 108
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=20.83 E-value=67 Score=29.82 Aligned_cols=81 Identities=15% Similarity=0.169 Sum_probs=47.5
Q ss_pred hHHHHHHHHhcc--CCEEEEc-CCCCC-----C--HHHHHHHHHHHHHhhcCCCCEEEecCcccccccchhhhcCCC---
Q 016016 161 KILAEVDKWMER--FDCLVVG-PGLGR-----D--PYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYP--- 227 (396)
Q Consensus 161 ~~~~ev~~~~~~--~dalvIG-~Gl~~-----~--~~~~~~v~~~l~~a~~~~~PvVLDpdgl~ll~~~~~ll~~~~--- 227 (396)
+.++++++++.. ..++.|| +|+.. . +.+.+.+...++.+.+.++||++=.... .....+++++.+
T Consensus 88 ~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~a--~~~~~~il~~~~~~~ 165 (301)
T 2xio_A 88 LYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNS--HAEFLDITKRNRDRC 165 (301)
T ss_dssp HHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEESC--HHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecCc--hHHHHHHHHhccCCC
Confidence 345677777664 3688887 45531 1 3345677778888888899999976321 111113333221
Q ss_pred -Cee---ecCCHHHHHHHhc
Q 016016 228 -LAV---LTPNVNEYKRLVQ 243 (396)
Q Consensus 228 -~~V---ITPN~~E~a~L~g 243 (396)
..| .+++..++.+++.
T Consensus 166 ~~~i~H~f~g~~~~~~~~l~ 185 (301)
T 2xio_A 166 VGGVVHSFDGTKEAAAALID 185 (301)
T ss_dssp SCEEETTCCCCHHHHHHHHH
T ss_pred CcEEEEccCCCHHHHHHHHh
Confidence 112 3677777777764
No 109
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=20.73 E-value=2.2e+02 Score=26.66 Aligned_cols=28 Identities=29% Similarity=0.357 Sum_probs=21.7
Q ss_pred eEEEEecCCCCCCcHHHHHHHHhhcCCCEEEE
Q 016016 87 KIAVIGGCREYTGAPYFAAISALKIGADLSHV 118 (396)
Q Consensus 87 ~vlvIgGSd~~~GA~ilAalaAlr~GaglVtv 118 (396)
+|+++|| +.-+...+.+|-+.|.-.+-+
T Consensus 3 ~I~ilGg----g~~g~~~~~~Ak~~G~~vv~v 30 (363)
T 4ffl_A 3 TICLVGG----KLQGFEAAYLSKKAGMKVVLV 30 (363)
T ss_dssp EEEEECC----SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECC----CHHHHHHHHHHHHCCCEEEEE
Confidence 6899998 456777888888889876655
Done!