BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016017
(396 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 38/302 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SG 388
G
Sbjct: 346 KG 347
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 38/302 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSFT-GISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SG 388
G
Sbjct: 346 KG 347
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 38/302 (12%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-K 273
LS +G + R + +GC +G ++ ++TD L H+ +
Sbjct: 180 R-------HLSDVGIGHLAGMTRS--AAEGC-----LGLEQLTLQDCQKLTDLSLKHISR 225
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLEL-SDTQVGSSGLRHLS-GLTNLESIN 330
GLT L LNL CG I D GL++L+ + +L+ L L S + +G+ HL+ G L ++
Sbjct: 226 GLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLD 285
Query: 331 LSF-TGISDGSLRKLA-GLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFG-ARITD 386
+SF + D SL +A GL LKSL+L + I+D G+ + + GL L++ RITD
Sbjct: 286 VSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITD 345
Query: 387 SG 388
G
Sbjct: 346 KG 347
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q723K6|INLA_LISMF Internalin-A OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlA PE=3 SV=1
Length = 800
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 171/358 (47%), Gaps = 54/358 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNY 424
>sp|G2K3G6|INLA_LISM4 Internalin-A OS=Listeria monocytogenes serotype 1/2a (strain
10403S) GN=inlA PE=3 SV=1
Length = 800
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 172/358 (48%), Gaps = 54/358 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNY 424
>sp|P0DJM0|INLA_LISMO Internalin-A OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlA PE=1 SV=1
Length = 800
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 166/329 (50%), Gaps = 39/329 (11%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
L GL L LEL++ Q+ + +S L NL + L F ISD + ++ L+ L+ L
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISD--ISPVSSLTKLQRL 366
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGA 382
+++D ++SL LT+++ A
Sbjct: 367 FFYNNKVSD-----VSSLANLTNINWLSA 390
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 193/397 (48%), Gaps = 38/397 (9%)
Query: 13 ELVYSRCLTEVSLEAFRD--CALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT 70
E V S LT+ L A + +++L L P V+ + +A + +SL S+DL G V
Sbjct: 120 ENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVG 179
Query: 71 DSGLIHL-KDCSNLQSLDFNFCIQISD-GGLEHLRGLS-NLTSLSFRRNNAITAQGMKAF 127
D GL + K C L+ L+ FC ++D G ++ + G S +L S+ + IT ++A
Sbjct: 180 DQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAV 239
Query: 128 AG---LINLVKLDLERCTRIH-GGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGL-TN 181
L+ ++ LD E IH GL+ + +G +L++L ++ C +TD + L T+
Sbjct: 240 GSHCKLLEVLYLDSE---YIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTS 295
Query: 182 LKSLQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLS-ALGSLFYLNLNR 237
L+ L + S TD G+ + KG +KL L L C V+ L++++ L + +N
Sbjct: 296 LERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355
Query: 238 CQ-LSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSC-GIGD-- 290
C + G E K LK L L + I + L + KG +LE L+L C GIGD
Sbjct: 356 CHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIA 415
Query: 291 -----EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKL 344
+G NL L +C E+ + + S G +H LT L +L F + + +L +
Sbjct: 416 MCSIAKGCRNLKKLHIRRCYEIGNKGIISIG-KHCKSLTEL---SLRFCDKVGNKALIAI 471
Query: 345 AGLSSLKSLNLDA-RQITDTGLAALTS-LTGLTHLDL 379
SL+ LN+ QI+D G+ A+ LTHLD+
Sbjct: 472 GKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDI 508
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 246 EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL 305
E S I V ++G + +C T+L+SL+L C +GD+GL + C
Sbjct: 143 ENLSLIWCPNVSSVGLCSLAQKC-------TSLKSLDLQGCYVGDQGLAAVGKFCK---- 191
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINL------SFTGISDGSLRKLAGLS---------SL 350
Q+ LR GLT++ I+L S I + K+ LS L
Sbjct: 192 -----QLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLL 246
Query: 351 KSLNLDARQITDTGLAALTS-LTGLTHLDLFGARITDSGAA 390
+ L LD+ I D GL A+ L +L L +TD A
Sbjct: 247 EVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFA 287
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 170/393 (43%), Gaps = 83/393 (21%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL-KDCSNLQSLDFNFC 91
LQ+L + P D+ M I+ +L ++LS + +T+ + L + NLQ+L +C
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 92 IQISDGGLEHLR---GLSNLTSLSFRRNNAITAQGMKAFA----GLINL----------- 133
+ +D GL++L G L L I+ QG + A G+++L
Sbjct: 307 RRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDN 366
Query: 134 -VKLDLERCTRI---------HGGLVNLKGLM--KLESLNIKWCNCITDSDMKPL-SGLT 180
VK +E+C+RI H + L KL + + +TD+ K +
Sbjct: 367 CVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYP 426
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
NL + ++ C +TDS + L L++LT+LNL C
Sbjct: 427 NLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANC------------------------- 461
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+++ ++G + D + LNL +C + D ++ L+
Sbjct: 462 --------------VRIGDMGLKQFLDG-----PASMRIRELNLSNCVRLSDASVMKLSE 502
Query: 299 LC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL- 355
C NL L L + + + + G+ ++ + +L SI+LS T IS+ L L+ LK L++
Sbjct: 503 RCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
Query: 356 DARQITDTGLAAL-TSLTGLTHLDL-FGARITD 386
+ +ITD G+ A S L HLD+ + ++++D
Sbjct: 563 ECYRITDDGIQAFCKSSLILEHLDVSYCSQLSD 595
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 83 LQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
++ L+ + C+++SD + L NL LS R +TAQG+ + +LV +DL
Sbjct: 481 IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT 540
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL--SGLTNLKSLQIS-CSKVTDSGIA 198
+ GL L KL+ L++ C ITD ++ S L L+ L +S CS+++D I
Sbjct: 541 DISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLI-LEHLDVSYCSQLSDMIIK 599
Query: 199 YLKGL-QKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRCQLSDDGCEKFSKIG--S 253
L LT L++ GCP +T + ++ LSA L L+++ C L D + +IG
Sbjct: 600 ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQ 659
Query: 254 LKVLNLGF 261
L++L + +
Sbjct: 660 LRILKMQY 667
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL+S+DLSG+D+++ GL L L+ L + C +I+D G++ +F +++
Sbjct: 531 SLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQ-----------AFCKSS 579
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL--MKLESLNIKWCNCITDSDMKP 175
I L LD+ C+++ ++ + + L SL+I C ITDS M+
Sbjct: 580 LI-------------LEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEM 626
Query: 176 LSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LS + L L IS C +TD + L+ G ++L +L ++ C
Sbjct: 627 LSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYC 668
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV--LNLGFNEITD 266
LN GC + S+S +L LN++ C D + G V LNL IT+
Sbjct: 226 LNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITN 285
Query: 267 ECLVHL-KGLTNLESLNLDSC-GIGDEGL--VNLTGLCN-LKCLELSD-TQVGSSGLRHL 320
+ L + NL++L+L C D+GL +NL C+ L L+LS TQ+ G R++
Sbjct: 286 RTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYI 345
Query: 321 ----SGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTSLTGL 374
+G+ +L +IN ++D ++ L S + SL A I+D AL++ L
Sbjct: 346 ANSCTGIMHL-TIN-DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKL 402
Query: 375 THLDLFG-ARITDSGAAYLRSKF 396
+ G R+TD+ ++ +
Sbjct: 403 RKIRFEGNKRVTDASFKFIDKNY 425
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 21/249 (8%)
Query: 57 SSLLSVDLSGS-DVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSF 113
S L +DL+ +T+S L + + C +L+ L+ ++C QI+ G+E L RG L +L
Sbjct: 130 SKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLL 189
Query: 114 RRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITD 170
R + + +K + LV L+L+ C+R+ G+V L +G +L++L + C +TD
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTD 249
Query: 171 SDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSL 224
+ + L+ N LQI CS +TD+G L + L ++LE C +T L L
Sbjct: 250 ASLTALA--LNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQL 307
Query: 225 S-ALGSLFYLNLNRCQL-SDDGCEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTN 277
S L L+L+ C+L +DDG S L+VL L ITD L HL+
Sbjct: 308 SIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRG 367
Query: 278 LESLNLDSC 286
LE L L C
Sbjct: 368 LERLELYDC 376
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CSKVTD 194
+G LE LN+ WC+ IT ++ L G L++L + C+++ D
Sbjct: 153 ---------------EGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLED 197
Query: 195 SGIAYLKGL-QKLTLLNLE---------------GCP-VTAACLDSLSAL--GSLFYLNL 235
+ +++ +L LNL+ GCP + A CL +L SL L L
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALAL 257
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNL---GFNEITDECLVHLKGLTNLESLNLDSCG-IGDE 291
N C + + + + +L GF + C +LE ++L+ C I D
Sbjct: 258 N--------CPRLQILEAARCSHLTDAGFTLLARNC-------HDLEKMDLEECILITDR 302
Query: 292 GLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGISDGSLRKL 344
L L+ C L+ L LS + + G+ HLS G L + L + I+D +L L
Sbjct: 303 TLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVALEHL 362
Query: 345 AGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
L+ L L D +Q+T G+ + + + + A +T AA
Sbjct: 363 EHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRVHAYFAPVTPPTAA 409
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKDCS----NLQSLDFNFCIQISDGG 98
+ D+ + ++ L ++ LS + +TD G++HL + L+ L+ + C+ I+D
Sbjct: 299 ITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVA 358
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LEHL L L +T G+K + V++
Sbjct: 359 LEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRV 396
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 128/249 (51%), Gaps = 21/249 (8%)
Query: 57 SSLLSVDLSGS-DVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSF 113
S L +DL+ VT+S L + + C NL+ L+ ++C QI+ G+E L RG L +L
Sbjct: 130 SKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLL 189
Query: 114 RRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITD 170
R + + +K + LV L+L+ C+RI G+V + +G +L++L + C+ +TD
Sbjct: 190 RGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 171 SDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSL 224
+ + L GL N LQ+ CS +TD+G L + +L ++LE C +T + L L
Sbjct: 250 ASLTAL-GL-NCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQL 307
Query: 225 S-ALGSLFYLNLNRCQL-SDDGCEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTN 277
S L L+L+ C+L +D+G S L+VL L +TD L HL+
Sbjct: 308 SIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRG 367
Query: 278 LESLNLDSC 286
LE L L C
Sbjct: 368 LERLELYDC 376
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L ++T +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQVLEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D LV L+ C L+ L LS + + G+ HLS G L + L + ++
Sbjct: 296 CVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D SL L L+ L L D +Q+T G+ + + + + A +T A
Sbjct: 356 DASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPPAV 409
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + L+ L+ + C+ ++D LEHL L L +T G+
Sbjct: 325 ITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|Q91ZZ5|RXFP2_MOUSE Relaxin receptor 2 OS=Mus musculus GN=Rxfp2 PE=2 SV=2
Length = 737
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
SN+T LS ++N I +K F+ L K+ L+
Sbjct: 120 SNVTLLSLKKNK-IHRLPVKVFSRYTELRKIYLQH------------------------- 153
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
NCIT + GL NL+ L +S + +T K L +L L L+ P+T S
Sbjct: 154 NCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFM 213
Query: 226 ALGSLFYLNL--NRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L SLF+L++ NR + L + C + ++ + + N G IT+ + LT L L
Sbjct: 214 GLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVL-FLP 272
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ G E + L NL L+LS + + S L L+ +NLS +
Sbjct: 273 RNQIGFVPEK--TFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ L L+SL+L+ +I + + L+H+ L
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL 367
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 87/328 (26%), Positives = 134/328 (40%), Gaps = 86/328 (26%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+E L+ L NLTSL+ NN + L+NLV L+L R L ++GL+ L+
Sbjct: 172 IEGLQYLENLTSLNLSENN---ISDLAPIKDLVNLVSLNLSS-NRTLVNLSGVEGLVNLQ 227
Query: 159 SLNIKWCNCITD----------------------------------------------SD 172
LN+ + D +D
Sbjct: 228 ELNVSANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILPELETFYLQENDLTD 287
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ L+ L LK+L I + S +A LKG KL L++ C L LG +
Sbjct: 288 LTSLAKLPKLKNLYIKGNASLKS-LATLKGATKLQLIDASNC-------TDLETLGDISG 339
Query: 233 LN-LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDE 291
L+ L QLS GC K +I S LK L NL ++ DSC I D
Sbjct: 340 LSELEMIQLS--GCSKLKEITS------------------LKDLPNLVNITADSCAIEDL 379
Query: 292 GLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK 351
G +N L L+ L LSD + + + ++ + L+++ L GI+ S+ L L L+
Sbjct: 380 GTLN--NLPKLQTLILSDNK-DLTNINAITDMPQLKTLALDGCGIT--SIGTLDNLPKLE 434
Query: 352 SLNLDARQITDTGLAALTSLTGLTHLDL 379
L+L Q+T ++ + L L++LD+
Sbjct: 435 KLDLKENQLTS--ISEINDLPRLSYLDV 460
Score = 40.8 bits (94), Expect = 0.018, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 37/238 (15%)
Query: 67 SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFR------------ 114
++V+D +IH D NL+ +D + + + G ++L L NL S R
Sbjct: 529 NNVSDISMIH--DMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSVIHDLPS 586
Query: 115 ------RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCI 168
+NN IT G + V L R L + L KLE L + N
Sbjct: 587 LETFYAQNNLITNIGTMDNLPELTYVDLSFNRIP----SLAPIGDLPKLEILKVT-DNYS 641
Query: 169 TDSDMKPLSGLTNLKSLQISCSKV----TDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
+ + G++ L++L++ + + T+ ++ L L LT LNL + + L
Sbjct: 642 YLRSLGTMDGVSKLRNLELQNNYLNYTGTEGNLSALSDLTNLTELNLRDNGYISD-ISGL 700
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
S L L YLNL+ ++ D S + +L+ L L N+I D + L++L++LN
Sbjct: 701 STLSRLIYLNLDSNKIKD--ISALSNLTTLQELTLENNQIED-----ISALSDLDNLN 751
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 118/286 (41%), Gaps = 6/286 (2%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLES 159
+GLS+L L+ N+ + F GL NL +L L + T + L GL +L
Sbjct: 166 FQGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--FCGLGELRE 222
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGL 281
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 341
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L+ I + + +GL N+ + LS + S R GL L S++L + +
Sbjct: 342 VLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 401
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L AGLS L+ L L I+ +L L+ L LDL R+T
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLT 447
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 8/279 (2%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER---CTRIHGGLVNLKGLMKLESL 160
GL L L RN A+ + F L L KL L+R G + +K L L+
Sbjct: 216 GLGELRELDLSRN-ALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLS 274
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ + + D+ GL L L+++ + + K L L L L +
Sbjct: 275 HNRVAGLMEDT----FPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLG 330
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+ LG L L LN Q+++ FS + ++ V+NL N + +GL L S
Sbjct: 331 ERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHS 390
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGS 340
L+L+ +G L GL L+ L L D + S + L+GL+ L ++L+ ++
Sbjct: 391 LHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLP 450
Query: 341 LRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ GL L+ L L Q+T L L LD+
Sbjct: 451 RQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDI 489
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 132/326 (40%), Gaps = 19/326 (5%)
Query: 72 SGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
GL HL D + L +N + + D + GL NL L N +T F GL
Sbjct: 167 QGLSHLWDLN----LGWNSLVVLPDTVFQ---GLGNLHELVLA-GNKLTYLQPALFCGLG 218
Query: 132 NLVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
L +LDL R L ++K L +L+ L + N IT G+ L+ L
Sbjct: 219 ELRELDLSR-----NALRSVKANVFVHLPRLQKLYLD-RNLITAVAPGAFLGMKALRWLD 272
Query: 187 ISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCE 246
+S ++V GL L +L L + + + L L L L ++ G
Sbjct: 273 LSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGER 332
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLE 306
F +G L+VL L N+IT+ + GL N+ +NL + GL L L
Sbjct: 333 TFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLH 392
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
L + +G L +GL+ L + L IS + LAGLS L L+L ++T
Sbjct: 393 LEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQ 452
Query: 367 ALTSLTGLTHLDLFGARITDSGAAYL 392
L L +L L ++T A L
Sbjct: 453 LFQGLGHLEYLLLSYNQLTTLSAEVL 478
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI++ + GL N+ ++ N + + + F GL L L LE H L
Sbjct: 349 QITEVRVGAFSGLFNVAVMNLS-GNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFA 407
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L L ++ N I+ + + L+GL+ L L ++ +++T +GL L L L
Sbjct: 408 GLSGLRRLFLR-DNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLS 466
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
+T + L L F+L+++ L FS +G ++ L+L N +
Sbjct: 467 YNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSL 518
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 14/210 (6%)
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
++L + + ++ A + L L LNL+G + + +L L +L+YL+L R +L +
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRN 136
Query: 243 DGCEKFSKIGSLKVLNLGFNEI--TDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT--- 297
F+ SL L+L N + +E L +GL++L LNL G LV L
Sbjct: 137 LAVGLFTHTPSLASLSLSSNLLGRLEEGL--FQGLSHLWDLNL-----GWNSLVVLPDTV 189
Query: 298 --GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
GL NL L L+ ++ GL L ++LS + L L+ L L
Sbjct: 190 FQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYL 249
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARIT 385
D IT A + L LDL R+
Sbjct: 250 DRNLITAVAPGAFLGMKALRWLDLSHNRVA 279
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
L S+ L ++VTD L + L+ LD + C +I+D L + G+ +L LS
Sbjct: 230 PQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGC 287
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T +G++ NL +LD+ C + G V LK L+ L+ L++ NC D+ L
Sbjct: 288 WNVT-KGLEELCKFSNLRELDISGCL-VLGSAVVLKNLINLKVLSVS--NCKNFKDLNGL 343
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L NL+ L +S C V S + ++ L L L++ GC + C D L L +L L L
Sbjct: 344 ERLVNLEKLNLSGCHGV--SSLGFVANLSNLKELDISGCE-SLVCFDGLQDLNNLEVLYL 400
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNL-------GFNEITDECLVHLKGLTNLESLNLDSCG 287
+ F+ +G++K L+ G IT L L+ L LE L+L+ CG
Sbjct: 401 RDVK-------SFTNVGAIKNLSKMRELDLSGCERITS--LSGLETLKGLEELSLEGCG 450
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 156/346 (45%), Gaps = 48/346 (13%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--------- 116
GS++ D L L+D L+ LD + C + L + L NL L +R
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 117 ----------NAITAQGMKAFAGLINLVKLD---LERCTRIHGGLVNLKGLMKLESLNIK 163
++G+ GL L L+ L+ C I G + L +L SL++
Sbjct: 179 IGLLKFLVHLEVDGSRGVTDITGLFRLKTLEALSLDNCINITKGFDKICALPQLTSLSLC 238
Query: 164 WCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N +TD D++ + LK L I SC ++TD + + G++ L L+L GC L+
Sbjct: 239 QTN-VTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGCWNVTKGLE 295
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L +L L+++ C + + +LKVL++ N + L L+ L NLE LN
Sbjct: 296 ELCKFSNLRELDISGCLVLGSAV-VLKNLINLKVLSVS-NCKNFKDLNGLERLVNLEKLN 353
Query: 283 LDSC-GIGDEGLVNLTGLCNLKCLELS--DTQVGSSGLRHLSGLTNLESINL----SFTG 335
L C G+ G V L NLK L++S ++ V GL+ L+ NLE + L SFT
Sbjct: 354 LSGCHGVSSLGFV--ANLSNLKELDISGCESLVCFDGLQDLN---NLEVLYLRDVKSFTN 408
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
+ + LS ++ L+L + T L+ L +L GL L L G
Sbjct: 409 VG-----AIKNLSKMRELDLSGCERI-TSLSGLETLKGLEELSLEG 448
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 151/344 (43%), Gaps = 55/344 (15%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL + LSG GL L SNL+ LD + C+ + G L+ L NL LS +N
Sbjct: 278 SLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVL--GSAVVLKNLINLKVLSV--SN 333
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ + L+NL KL+L C HG L + L L+ L+I C + D
Sbjct: 334 CKNFKDLNGLERLVNLEKLNLSGC---HGVSSLGFVANLSNLKELDISGCESLVCFD--G 388
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L NL+ L + K + + + +K L K+ L+L GC + SLS L +L L
Sbjct: 389 LQDLNNLEVLYLRDVK-SFTNVGAIKNLSKMRELDLSGCER----ITSLSGLETLKGLE- 442
Query: 236 NRCQLSDDGCEK---FSKIGSLKVLNLGFNEITDEC-----LVHLKGLTNLESLNLDSC- 286
+LS +GC + F I SL L + + EC L L+ LT LE + L C
Sbjct: 443 ---ELSLEGCGEIMSFDPIWSLYHLRVLY---VSECGNLEDLSGLQCLTGLEEMYLHGCR 496
Query: 287 ---GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSGLTNLESI---NLSFTGIS 337
G + NL +C L+ C L D SGL+ L+GL L I ++ G+
Sbjct: 497 KCTNFGP--IWNLRNVCVLELSCCENLDDL----SGLQCLTGLEELYLIGCEEITTIGVV 550
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
G+LR L LS+ NL L L L L LDL G
Sbjct: 551 -GNLRNLKCLSTCWCANLKE-------LGGLERLVNLEKLDLSG 586
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 136/321 (42%), Gaps = 72/321 (22%)
Query: 122 QGMKAFAGLINLVKLDLERCTRIHG-------GLVNLKGL-MKLESLNIKWCNCITDSDM 173
Q + A L L LDL C + L NL+ L MK +N WC+ I
Sbjct: 125 QDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSSI----- 179
Query: 174 KPLSGLTNLKSLQISCSK-VTD-SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
L L L++ S+ VTD +G+ LK L+ L+L N C D + AL L
Sbjct: 180 ---GLLKFLVHLEVDGSRGVTDITGLFRLKTLEALSLDN---CINITKGFDKICALPQLT 233
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L+L + ++D G LK+L++ +EITD L + G+ +LE L+L C
Sbjct: 234 SLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGCWNVT 291
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSG----------------------LRHLSGLTNLES 328
+GL L NL+ L++S V S L L L NLE
Sbjct: 292 KGLEELCKFSNLRELDISGCLVLGSAVVLKNLINLKVLSVSNCKNFKDLNGLERLVNLEK 351
Query: 329 INLS-FTGISDGSLRKLAGLSSLKSL------------------NLDARQITD----TGL 365
+NLS G+S SL +A LS+LK L NL+ + D T +
Sbjct: 352 LNLSGCHGVS--SLGFVANLSNLKELDISGCESLVCFDGLQDLNNLEVLYLRDVKSFTNV 409
Query: 366 AALTSLTGLTHLDLFGA-RIT 385
A+ +L+ + LDL G RIT
Sbjct: 410 GAIKNLSKMRELDLSGCERIT 430
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 58.5 bits (140), Expect = 9e-08, Method: Composition-based stats.
Identities = 94/333 (28%), Positives = 141/333 (42%), Gaps = 78/333 (23%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG---LM 155
+E L+ L NLTSL+ NN + L+NLV L+L + LVNL G L+
Sbjct: 175 IEGLQYLENLTSLNLSENN---ISDLAPLKDLVNLVSLNLSS----NRTLVNLSGVEDLV 227
Query: 156 KLESLNIKWCNCITD-SDMKPLSGLT-------NLKSLQI-------------------- 187
L+ LN+ + D S + L L N+K+L++
Sbjct: 228 NLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLPELETFYLQEND 287
Query: 188 -----SCSKVTDSGIAYLKGLQKL-TLLNLEGCP----VTAACLDSLSALGSLFYLN-LN 236
S +K+ Y+KG L +L L G + A+ L LG + L+ L
Sbjct: 288 LTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSELE 347
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
QLS GC K +I S LK L NL ++ DSC I D G +N
Sbjct: 348 MIQLS--GCSKLKEITS------------------LKNLPNLVNITADSCAIEDLGTLN- 386
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI-NLSFTGISDGSLRKLAGLSSLKSLNL 355
L L+ L LSD + L +++ +T+L + L+ G S+ L L L+ L+L
Sbjct: 387 -NLPKLQTLVLSDNE----NLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDL 441
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
QIT ++ +T L L++LD+ +T G
Sbjct: 442 KENQITS--ISEITDLPRLSYLDVSVNNLTTIG 472
Score = 36.2 bits (82), Expect = 0.45, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 43/227 (18%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L S+D+ + +T + +IH D +L++ + + + G +++L L+ +LSF R +
Sbjct: 568 LQSLDVHSNRITSTSVIH--DLPSLETFNAQTNLITNIGTMDNLPDLT-YVNLSFNRIPS 624
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIK--WCNCI-TDSDMKP 175
+ G L NL L + L + G+ KL L+++ + N T+ ++
Sbjct: 625 LAPIG-----DLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTGTEGNLSS 679
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
LS LTNL L + + D + LS L L YLNL
Sbjct: 680 LSDLTNLTELNLRNNVYIDD-------------------------ISGLSTLSRLIYLNL 714
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+ ++ D S + +L+ L L N+I + + L++LE+LN
Sbjct: 715 DSNKIED--ISALSNLTNLQELTLENNKIEN-----ISALSDLENLN 754
Score = 33.9 bits (76), Expect = 2.0, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 95 SDGGLEHLRGLSNLTSLSFRRNNAI-TAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG 153
++G L L L+NLT L+ R N I G+ + LI L LD + I L NL
Sbjct: 673 TEGNLSSLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYL-NLDSNKIEDI-SALSNLTN 730
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
L +L N K N + LS L NL L +S +K+ D
Sbjct: 731 LQELTLENNKIEN------ISALSDLENLNKLVVSKNKIID 765
>sp|Q9D1T0|LIGO1_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Mus musculus GN=Lingo1
PE=1 SV=1
Length = 614
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 13/269 (4%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS +G+ L L L+ I L ++ GL+ L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 331
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ LN+ Q+T +A S+ L L L
Sbjct: 332 RVLNVSGNQLTTLEESAFHSVGNLETLIL 360
>sp|P58682|TLR8_MOUSE Toll-like receptor 8 OS=Mus musculus GN=Tlr8 PE=1 SV=2
Length = 1032
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 143/377 (37%), Gaps = 73/377 (19%)
Query: 50 DVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC------------IQISDG 97
+V + G + ++DLS + +T + NL +D N + I++G
Sbjct: 56 EVPQTIGKYVTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEG 115
Query: 98 GLEHLRGLS------------------NLTSLSFRRNNAITAQGMKAFAGLINLVKLDL- 138
L LR L+ +L LS +NN F GL NL +L L
Sbjct: 116 ALLSLRNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTF-GLRNLERLYLG 174
Query: 139 -------ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
+ ++ G K L+ L+ L++ + N P ++L+ L +S +K
Sbjct: 175 WNCYFKCNQTFKVEDGA--FKNLIHLKVLSLSFNNLFYVPPKLP----SSLRKLFLSNAK 228
Query: 192 VTDSGIAYLKGLQKLTLLNLEG-CP----VTAACLD------------SLSALGSLFYLN 234
+ + KGL+ LTLL+L G CP C + +L L YLN
Sbjct: 229 IMNITQEDFKGLENLTLLDLSGNCPRCYNAPFPCTPCKENSSIHIHPLAFQSLTQLLYLN 288
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL--VHLKGLTNLESLNLDSCGIGDEG 292
L+ L F + +LK L+L FN + E L L +L+ L+L E
Sbjct: 289 LSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNFQYKEY 348
Query: 293 LV------NLTGLCNLKCLELSDT---QVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
L N + L +LK L L ++ HL L NL +INL I +
Sbjct: 349 LQFINISSNFSKLRSLKKLHLRGYVFRELKKKHFEHLQSLPNLATINLGINFIEKIDFKA 408
Query: 344 LAGLSSLKSLNLDARQI 360
S L + L +I
Sbjct: 409 FQNFSKLDVIYLSGNRI 425
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 132/318 (41%), Gaps = 19/318 (5%)
Query: 73 GLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLIN 132
GL HL D + L +N + + D + GL NL L N +T GL
Sbjct: 168 GLSHLWDLN----LGWNSLVVLPDTVFQ---GLGNLHELVLA-GNKLTYLQPALLCGLGE 219
Query: 133 LVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQI 187
L +LDL R L ++K L +L+ L + N IT + G+ L+ L +
Sbjct: 220 LRELDLSR-----NALRSVKANVFIHLPRLQKLYLD-RNLITAVAPRAFLGMKALRWLDL 273
Query: 188 SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEK 247
S ++V GL L +L L +T+ + L L L L ++ G +
Sbjct: 274 SHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKT 333
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLEL 307
F +G L+VL L N+I + + GL N+ +NL + GL L L L
Sbjct: 334 FEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHL 393
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA 367
+ +G L +GL+ L + L IS + LAGLS L L+L A Q+T
Sbjct: 394 EHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQL 453
Query: 368 LTSLTGLTHLDLFGARIT 385
L L +L L ++T
Sbjct: 454 FQGLGQLEYLLLSNNQLT 471
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 6/286 (2%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDL--ERCTRIHGGLVNLKGLMKLES 159
RGLS+L L+ N+ + F GL NL +L L + T + L L GL +L
Sbjct: 166 FRGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--LCGLGELRE 222
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGL 281
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 LEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLE 341
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L+ I + + GL N+ + LS + S GL L S++L + +
Sbjct: 342 VLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRI 401
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
L AGLS L+ L L I+ +L L+ L LDL ++T
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLT 447
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 115/291 (39%), Gaps = 28/291 (9%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-LKGLMKLESLNIK 163
L L L RN ITA +AF G+ L LDL R+ G L + GL+ L L +
Sbjct: 241 LPRLQKLYLDRN-LITAVAPRAFLGMKALRWLDLSH-NRVAGLLEDTFPGLLGLHVLRLA 298
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDS 223
N IT + L L+ LQ+ +++ G +GL
Sbjct: 299 -HNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGL-------------------- 337
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
G L L LN Q+ + F + ++ V+NL N + +GL L SL+L
Sbjct: 338 ----GQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHL 393
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
+ +G L GL L+ L L D + S + L+GL+ L ++L+ ++ +
Sbjct: 394 EHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQL 453
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRS 394
GL L+ L L Q+T L L LDL R+ S
Sbjct: 454 FQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSS 504
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 43/274 (15%)
Query: 47 KWMDVIASQGSSLLS-----------VDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQIS 95
+W+D+ ++ + LL + L+ + +T KD L+ L +I
Sbjct: 269 RWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHN-RIR 327
Query: 96 DGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE-RCTRIHGGLVNLKGL 154
G + GL L L+ +N I + AF GL N+ ++L C R V +GL
Sbjct: 328 QLGEKTFEGLGQLEVLTLN-DNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHV-FQGL 385
Query: 155 MKLESLNIKWC-----------------------NCITDSDMKPLSGLTNLKSLQISCSK 191
+L SL+++ N I+ + + L+GL+ L L ++ ++
Sbjct: 386 GRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQ 445
Query: 192 VTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKI 251
+T +GL +L L L +T D L L F+L+L+ +L FS +
Sbjct: 446 LTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSL 505
Query: 252 GSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
G L+ LNL N + + V G LE L LD+
Sbjct: 506 GRLRYLNLRNNSL--QTFVPQPG---LERLWLDA 534
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 138/362 (38%), Gaps = 89/362 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C + +D L + S L L +IT +KA +
Sbjct: 114 QNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS-------- 165
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 ---------------EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 188 -------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
+C ++TD G I +G KL L GC +T A L++L
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 227 -LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L + RC QL+D +GF + C LE ++L+
Sbjct: 271 NCPRLRILEVARCSQLTD----------------VGFTTLARNC-------HELEKMDLE 307
Query: 285 SC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-I 336
C I D L+ L+ C L+ L LS + + G+RHL LE I L I
Sbjct: 308 ECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLI 367
Query: 337 SDGSLRKLAGLSSLKSLNL-DARQITDTGLAAL-TSLTGLTHLDLFGARITDSGAAYLRS 394
+D SL L SL+ + L D +QIT G+ L T L + F R
Sbjct: 368 TDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQ 427
Query: 395 KF 396
+F
Sbjct: 428 RF 429
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+TD+ L HLK C +L+ ++ C QI+ G++ LR
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLR 401
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 KAFAGLINLVKL 136
K + +K+
Sbjct: 398 KRLRTHLPNIKV 409
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 138/362 (38%), Gaps = 89/362 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C + +D L + S L L +IT +KA +
Sbjct: 114 QNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS-------- 165
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 ---------------EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 188 -------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
+C ++TD G I +G KL L GC +T A L++L
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 227 -LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L + RC QL+D +GF + C LE ++L+
Sbjct: 271 NCPRLRILEVARCSQLTD----------------VGFTTLARNC-------HELEKMDLE 307
Query: 285 SC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-I 336
C I D L+ L+ C L+ L LS + + G+RHL LE I L I
Sbjct: 308 ECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLI 367
Query: 337 SDGSLRKLAGLSSLKSLNL-DARQITDTGLAAL-TSLTGLTHLDLFGARITDSGAAYLRS 394
+D SL L SL+ + L D +QIT G+ L T L + F R
Sbjct: 368 TDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQ 427
Query: 395 KF 396
+F
Sbjct: 428 RF 429
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+TD+ L HLK C +L+ ++ C QI+ G++ LR
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLR 401
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 KAFAGLINLVKL 136
K + +K+
Sbjct: 398 KRLRTHLPNIKV 409
>sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1
Length = 479
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 25/225 (11%)
Query: 20 LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDL-SGSDVTDSGLIHL- 77
L E+SL+A+ + D L + A QG S ++ L S ++T+ G++++
Sbjct: 270 LAELSLQAYH---VTDTALAYF----------TARQGHSTHTLRLLSCWEITNHGVVNVV 316
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
NL SL + C +++D G+E + L L SL IT ++ A L L +
Sbjct: 317 HSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEE 376
Query: 136 LDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 193
L L+RC RI GL L + L SL ++WC + D +K L + NL+ L ++ C +T
Sbjct: 377 LVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAGCPLLT 436
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+G++ L LQ+L L L CP + L F +L RC
Sbjct: 437 TTGLSGLVQLQELEELELTNCP------GATPELFKYFSQHLPRC 475
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 145
L G+S+L F N +++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYSLSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYL---K 201
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 202 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 258
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 259 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGS 314
L + ITD L ++ L LE L LD C I D GL L+ + +L+ L L QV
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 315 SGLRHLSGLTNLESINLS 332
GL+HL + NL ++L+
Sbjct: 413 FGLKHLLAMRNLRLLSLA 430
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 159/407 (39%), Gaps = 82/407 (20%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL---KDCSN-LQSLDFNFCIQISDGGL 99
V+ W +V+A GS+ +DL G + K C L+ L C+ + D L
Sbjct: 51 VSRAW-NVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNAL 109
Query: 100 ----EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
++ R + L+ + T + F L LDL CT I ++LK L
Sbjct: 110 RTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCS--KLRHLDLASCTSITN--MSLKALS 165
Query: 156 K----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI----------------------- 187
+ LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVT 225
Query: 188 ----SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRC-Q 239
+C ++TD G I +G KL L GC +T A L++L L L + RC Q
Sbjct: 226 LNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQ 285
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
L+D +GF + C LE ++L+ C I D L+ L+
Sbjct: 286 LTD----------------VGFTTLARNC-------HELEKMDLEECVQITDSTLIQLSI 322
Query: 299 LC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-ISDGSLRKLAGLSSLK 351
C L+ L LS + + G+RHL LE I L I+D SL L SL+
Sbjct: 323 HCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLE 382
Query: 352 SLNL-DARQITDTGLAAL-TSLTGLTHLDLFGARITDSGAAYLRSKF 396
+ L D +QIT G+ L T L + F R +F
Sbjct: 383 RIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQRF 429
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 KAFAGLINLVKL 136
K + +K+
Sbjct: 398 KRLRTHLPNIKV 409
>sp|Q5UQA7|YR542_MIMIV Putative F-box/LRR-repeat protein R542 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R542 PE=4 SV=1
Length = 558
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 49/287 (17%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
F + NLVK DL C + LKGL K+ LN+K C ITD LS LT +K +
Sbjct: 271 FNKMPNLVKADLSGCINLLDE--QLKGLSKVRKLNLKECYDITDVG---LSYLTMVKKIN 325
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFY----LNLNRCQL 240
IS C ++TDSG+ YL +N+ GC +T L + L L+L C +
Sbjct: 326 ISYCFRITDSGLKYLSNAD---YVNICGCLKITNEGFFYLKKVPKLVVGYTTLSLYDCMI 382
Query: 241 SDDGC---EKFSKIGSLKVLNLG----FNEITDECL---------VHLKGLTNLESL--- 281
DGC E + + K L G + E T + V LK TNL +L
Sbjct: 383 --DGCGDYEYLTISDNTKQLITGKAFHYLENTSQIKIINCNNIIDVDLKSFTNLPTLSKI 440
Query: 282 NLDSC-GIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTGISDG 339
+L C I ++G L+ LCN+ +++S+ Q+ S G +S LTN + I++ S
Sbjct: 441 DLRYCNNITNQG---LSALCNIPIVKISNNYQISSKG---ISYLTNSKKISIE----SCP 490
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ L+ LK L + + + + +L H+D D
Sbjct: 491 KINSFPNLTGLKKLVF--KTMGKINMQLIQNLNEYYHIDTIHVYYRD 535
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 134/330 (40%), Gaps = 76/330 (23%)
Query: 107 NLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN---LKGLMKLESLNIK 163
N S SF N +K + RC + +N LK L + SLNI
Sbjct: 43 NPKSFSFNLKNCNPKDSIKYLQSV---------RCLNLSKSTINDDQLKYLSDVYSLNIS 93
Query: 164 WCNCITDSDMKPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLEGC-PVTAACL 221
C ITD + LS LT + L +S + +TD+G LK Q++ +NL C +T +
Sbjct: 94 NCKSITD---RGLSFLTQVVKLNVSYNGNITDNG---LKNFQRIKKINLCFCGKITDKGI 147
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLKG------ 274
++L +L SD+ + I +++ +NL IT +CL HL+
Sbjct: 148 ENLVYGKTLN---------SDEPIP--TVINTIRKINLQCCMRITSKCLQHLRRARSINM 196
Query: 275 -------------LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLS 321
+ N+E+L +D + D+ L NL + + + HL
Sbjct: 197 LYGPQTYNEDLQYIPNIETLKIDGLDVSDKNLTNLKYVKYI----FFGRNYPVIFMSHLD 252
Query: 322 GLTNL---------ESINLS-FTGISDGSL--------RKLAGLSSLKSLNL-DARQITD 362
LT L E I+ + + L +L GLS ++ LNL + ITD
Sbjct: 253 KLTKLILPNVPEHIEYIDFNKMPNLVKADLSGCINLLDEQLKGLSKVRKLNLKECYDITD 312
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYL 392
GL+ LT + + F RITDSG YL
Sbjct: 313 VGLSYLTMVKKINISYCF--RITDSGLKYL 340
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 44/269 (16%)
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
L+V +G ++TD+GL K+ ++ ++ FC +I+D G+E+L L S
Sbjct: 112 LNVSYNG-NITDNGL---KNFQRIKKINLCFCGKITDKGIENLVYGKTLNS--------- 158
Query: 120 TAQGMKAFAGLINLV-KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ +IN + K++L+ C RI L+ L + S+N+ + + D L
Sbjct: 159 ----DEPIPTVINTIRKINLQCCMRITSKC--LQHLRRARSINMLYGPQTYNED---LQY 209
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ N+++L+I V+D + LK ++ + G + L L L N+
Sbjct: 210 IPNIETLKIDGLDVSDKNLTNLKYVKYIFF----GRNYPVIFMSHLDKLTKLILPNVPEH 265
Query: 239 QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
D F+K+ +L +L G + DE LKGL+ + LNL C I D GL L
Sbjct: 266 IEYID----FNKMPNLVKADLSGCINLLDE---QLKGLSKVRKLNLKECYDITDVGLSYL 318
Query: 297 TGLCNLK---CLELSDTQVGSSGLRHLSG 322
T + + C ++D SGL++LS
Sbjct: 319 TMVKKINISYCFRITD-----SGLKYLSN 342
>sp|P51886|LUM_RAT Lumican OS=Rattus norvegicus GN=Lum PE=2 SV=1
Length = 338
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLE 306
FSK+ LK L++ +N +T+ K L +L+ N +G +GLVNLT + L+ +
Sbjct: 112 FSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLANNKISKLGSFDGLVNLTFIY-LQHNQ 170
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGL 365
L + V +S L GL +LE ++LSF +S + AGL +SL +L LD +IT+
Sbjct: 171 LKEEAVSAS----LKGLKSLEYLDLSFNQMS----KLPAGLPTSLLTLYLDNNKITNIPD 222
Query: 366 AALTSLTGLTHLDLFGARITDSGAA 390
TGL +L L + DSG
Sbjct: 223 EYFNRFTGLQYLRLSHNELADSGVP 247
>sp|Q8LB33|FB330_ARATH F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2
SV=1
Length = 353
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 22/189 (11%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI-GSLKVLNLGFN-EITDECLVHL 272
V C D AL SL +LNLN CQ +SD+G E + I LKV ++ +N +TD + +L
Sbjct: 102 VKTECPD---ALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNL 158
Query: 273 -KGLTNLESLNLDSCG--------IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
K ++ LNL C + E +L L +C++++D + L+ L
Sbjct: 159 VKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGL----LQVLQKC 214
Query: 324 TNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL-F 380
+L+++NL + +G +D + K++ L+ L+ L++ A+ I+D G+ + L L+L +
Sbjct: 215 FSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTW 274
Query: 381 GARITDSGA 389
RITD+G
Sbjct: 275 CVRITDAGV 283
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 105/243 (43%), Gaps = 57/243 (23%)
Query: 69 VTDSGLIHLK-DCSN----LQSLDFNFCIQISDGGLEHLRGL-SNLTSLSFRRNNAITAQ 122
V DS L +K +C + L+ L+ N C +ISD G+E + + L S N +T
Sbjct: 94 VVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDA 153
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTN 181
G++ NLVK C I LN+ C +TD M+ ++ +
Sbjct: 154 GIR------NLVK----NCRHI-------------TDLNLSGCKSLTDKSMQLVAESYPD 190
Query: 182 LKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ- 239
L+SL I+ C K+TD G+ L+ LQK C SL LNL
Sbjct: 191 LESLNITRCVKITDDGL--LQVLQK--------------CF-------SLQTLNLYALSG 227
Query: 240 LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT 297
+D K S + L+ L++ G I+DE + H+ LESLNL C I D G+ +
Sbjct: 228 FTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Query: 298 GLC 300
C
Sbjct: 288 NSC 290
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 25 LEAFRDC-ALQDLCLGQYPGVNDK-WMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCS 81
L+ + C +LQ L L G DK +M + S + L +D+ G+ +++D G+ H+ C+
Sbjct: 208 LQVLQKCFSLQTLNLYALSGFTDKAYMKI--SLLADLRFLDICGAQNISDEGIGHIAKCN 265
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
L+SL+ +C++I+D G+ + ++ TSL F
Sbjct: 266 KLESLNLTWCVRITDAGVNTIA--NSCTSLEF 295
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 81 SNLQSLDFNFCIQISDGGL-EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
+L+SL+ C++I+D GL + L+ +L +L+ + T + + L +L LD+
Sbjct: 189 PDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDIC 248
Query: 140 RCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
I G+ ++ KLESLN+ WC ITD+ + ++ SC+
Sbjct: 249 GAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIAN---------SCT-------- 291
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGS--LFYLNLNRC 238
L+ L+L + G VT CL++LS S L L++N C
Sbjct: 292 ---SLEFLSLFGIVG--VTDRCLETLSQTCSTTLTTLDVNGC 328
>sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3 PE=2 SV=1
Length = 904
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 126/320 (39%), Gaps = 68/320 (21%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
L +L LS NN I ++F GL NL +LDL R ++L L K++ + +W
Sbjct: 298 LPHLEYLSLEYNN-IEHLSSRSFYGLSNLRRLDLRRSFTRQS--ISLTSLPKIDDFSFQW 354
Query: 165 CNCITDSDM----------KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGC 214
C+ +M +GL LK L +S S + L+ L T L+L GC
Sbjct: 355 LKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSS------LRTLTNETFLSLAGC 408
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLK 273
P L L+L + ++S FS +G L+VL+LG NEI E +
Sbjct: 409 P--------------LLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWR 454
Query: 274 GLTN------------------------LESLNLDSCGIG--DEGLVNLTGLCNLKCLEL 307
GL N L+ L L + D L NL L+L
Sbjct: 455 GLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDL 514
Query: 308 SDTQVGSSGLRHLSGLTNLESINLSFTGISD--------GSLRKLAGLSSLKSLNLDARQ 359
S+ + + L GL LE ++L ++ G ++ L GL L LNL +
Sbjct: 515 SNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNG 574
Query: 360 ITDTGLAALTSLTGLTHLDL 379
+ + A L L +DL
Sbjct: 575 FDEIPVEAFKDLRELKSIDL 594
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 156/346 (45%), Gaps = 48/346 (13%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--------- 116
GS++ D L L+D L+ LD + C + L + L NL L +R
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 117 ----------NAITAQGMKAFAGLINLVKLD---LERCTRIHGGLVNLKGLMKLESLNIK 163
++G+ GL L L+ L+ C I G + L +L SL++
Sbjct: 179 IGLLKFLVHLEVDGSRGVTDITGLCRLKTLEALSLDSCINITKGFDKICALPQLTSLSLC 238
Query: 164 WCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N +TD D++ + LK L+ SC ++TD + + G++ L L+L GC L+
Sbjct: 239 QTN-VTDKDLRCIHPDGKLKVLRYSSCHEITD--LTAIGGMRSLEKLSLSGCWNVTKGLE 295
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L +L L+++ C + + +LKVL++ N + L L+ L NL+ LN
Sbjct: 296 ELCKFSNLRELDISGCLVLGSAV-VLKNLINLKVLSVS-NCKNFKDLNGLERLVNLDKLN 353
Query: 283 LDSC-GIGDEGLVNLTGLCNLKCLELS--DTQVGSSGLRHLSGLTNLESINL----SFTG 335
L C G+ G V L NLK L++S ++ V GL+ L+ NLE + L SFT
Sbjct: 354 LSGCHGVSSLGFV--ANLSNLKELDISGCESLVCFDGLQDLN---NLEVLYLRDVKSFTN 408
Query: 336 ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
+ + LS ++ L+L + T L+ L +L GL L L G
Sbjct: 409 VG-----AIKNLSKMRELDLSGCERI-TSLSGLETLKGLEELSLEG 448
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 152/344 (44%), Gaps = 55/344 (15%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL + LSG GL L SNL+ LD + C+ + G L+ L NL LS +N
Sbjct: 278 SLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVL--GSAVVLKNLINLKVLSV--SN 333
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ + L+NL KL+L C HG L + L L+ L+I C + D
Sbjct: 334 CKNFKDLNGLERLVNLDKLNLSGC---HGVSSLGFVANLSNLKELDISGCESLVCFD--G 388
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L NL+ L + K + + + +K L K+ L+L GC + SLS L +L L
Sbjct: 389 LQDLNNLEVLYLRDVK-SFTNVGAIKNLSKMRELDLSGCER----ITSLSGLETLKGLE- 442
Query: 236 NRCQLSDDGCEK---FSKIGSLKVLNLGFNEITDEC-----LVHLKGLTNLESLNLDSC- 286
+LS +GC + F I SL L + + EC L L+G+T LE L L C
Sbjct: 443 ---ELSLEGCGEIMSFDPIWSLHHLRVLY---VSECGNLEDLSGLEGITGLEELYLHGCR 496
Query: 287 ---GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSGLTNLESI---NLSFTGIS 337
G + NL +C ++ C L D SGL+ L+GL L I ++ G+
Sbjct: 497 KCTNFGP--IWNLRNVCVVELSCCENLEDL----SGLQCLTGLEELYLIGCEEITPIGVV 550
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFG 381
G+LR L LS+ NL L L L L LDL G
Sbjct: 551 -GNLRNLKCLSTCWCANLKE-------LGGLDRLVNLEKLDLSG 586
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 140/356 (39%), Gaps = 102/356 (28%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
C I D L+ L+ C L+ L LS + + G+ HLS T
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNST------------------ 337
Query: 343 KLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRSKF 396
G L+ L LD ITD L L + GL L+L+ ++T +G +R++
Sbjct: 338 --CGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQL 391
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 140/356 (39%), Gaps = 102/356 (28%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
C I D L+ L+ C L+ L LS + + G+ HLS T
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNST------------------ 337
Query: 343 KLAGLSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRSKF 396
G L+ L LD ITD L L + GL L+L+ ++T +G +R++
Sbjct: 338 --CGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQL 391
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|Q5MJ12|FXL16_RAT F-box/LRR-repeat protein 16 OS=Rattus norvegicus GN=Fbxl16 PE=2
SV=1
Length = 479
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
+ D ++V+ Q ++ ++LSG +D T++GL + + SL + CI ++D + +
Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWS-SLSARITSLSVSDCINVADDAIAAI 263
Query: 103 RGL-SNLTSLSFRRNNA--------------------------ITAQGM-KAFAGLINLV 134
L NL LS + + IT G+ L NL
Sbjct: 264 SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLT 323
Query: 135 KLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI-SCS 190
L L C+++ V L + L KL SL++ WC ITD ++ ++ L L+ L + C
Sbjct: 324 SLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCV 383
Query: 191 KVTDSGIAYLKGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQL 240
++TD+G++YL + L L L C V L L A+ SL L+L C L
Sbjct: 384 RITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPL 434
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 17/226 (7%)
Query: 182 LKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRC 238
+K++ + S +TD+G+ L+ +Q + L L GC A SLSA + L+++ C
Sbjct: 195 VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA--RITSLSVSDC 252
Query: 239 -QLSDDGCEKFSKI-GSLKVLNLGFNEITDECLVHLKGLT--NLESLNLDSCG-IGDEGL 293
++DD S++ +L L+L +TD L + + +L L SC I + G+
Sbjct: 253 INVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGV 312
Query: 294 VNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSF-TGISDGSLRKLA-GLS 348
VN+ L NL L LS ++V G+ ++ L L S++LS+ I+D +L +A L
Sbjct: 313 VNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLH 372
Query: 349 SLKSLNLD-ARQITDTGLAALTSLTGLTHLDL-FGARITDSGAAYL 392
L+ L LD +ITDTGL+ L++++ L L L + ++ D G +L
Sbjct: 373 RLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHL 418
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD+GL +L S+L+SL +C Q+ D GL+HL + +L LS +T G+
Sbjct: 385 ITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPLLTTTGL 440
>sp|Q5RDJ4|LIGO1_PONAB Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Pongo abelii GN=LINGO1
PE=2 SV=1
Length = 614
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS + + L L L+ I L ++ GL+ L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 331
Query: 351 KSLNLDARQIT 361
+ LN+ Q+T
Sbjct: 332 RVLNVSGNQLT 342
>sp|P51885|LUM_MOUSE Lumican OS=Mus musculus GN=Lum PE=1 SV=2
Length = 338
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLE 306
FSK+ LK L++ +N +T+ K L +L+ N +G +GLVNLT + L+ +
Sbjct: 112 FSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLTNNKISKLGSFDGLVNLTFIY-LQHNQ 170
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGL 365
L + V +S L GL +LE ++LSF +S + AGL +SL +L LD +I++
Sbjct: 171 LKEDAVSAS----LKGLKSLEYLDLSFNQMS----KLPAGLPTSLLTLYLDNNKISNIPD 222
Query: 366 AALTSLTGLTHLDLFGARITDSGAA 390
TGL +L L + DSG
Sbjct: 223 EYFKRFTGLQYLRLSHNELADSGVP 247
>sp|Q9N008|LIGO1_MACFA Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Macaca fascicularis
GN=LINGO1 PE=2 SV=1
Length = 614
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS + + L L L+ I L ++ GL+ L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAMVEPYAFRGLNYL 331
Query: 351 KSLNLDARQIT 361
+ LN+ Q+T
Sbjct: 332 RVLNVSGNQLT 342
>sp|Q96FE5|LIGO1_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Homo sapiens GN=LINGO1
PE=1 SV=2
Length = 620
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 162
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 163 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 222 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 277
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS + + L L L+ I L ++ GL+ L
Sbjct: 278 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 337
Query: 351 KSLNLDARQIT 361
+ LN+ Q+T
Sbjct: 338 RVLNVSGNQLT 348
>sp|O15455|TLR3_HUMAN Toll-like receptor 3 OS=Homo sapiens GN=TLR3 PE=1 SV=1
Length = 904
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 123/321 (38%), Gaps = 75/321 (23%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
F N I + GL N+ L+L+R ++L L K++ + +W C+ +
Sbjct: 304 FLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS--ISLASLPKIDDFSFQWLKCLEHLN 361
Query: 173 MK----P------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
M+ P +GL NLK L +S S + L+ L T ++L P
Sbjct: 362 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTS------LRTLTNETFVSLAHSP------- 408
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTN---- 277
L LNL + ++S + FS +G L+VL+LG NEI E +GL N
Sbjct: 409 -------LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEI 461
Query: 278 --------------------LESLNLDSCGIG--DEGLVNLTGLCNLKCLELSDTQVGSS 315
L+ L L + D L NL L+LS+ + +
Sbjct: 462 YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 521
Query: 316 GLRHLSGLTNLESINLSFTGISD--------GSLRKLAGLSSLKSLNLDARQITDTGLAA 367
L GL LE ++L ++ G + L GLS L LNL++ + +
Sbjct: 522 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 581
Query: 368 LTSLTGLTHLDLFGARITDSG 388
DLF +I D G
Sbjct: 582 FK--------DLFELKIIDLG 594
>sp|Q50L44|LIGO1_CHICK Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Gallus gallus
GN=LINGO1 PE=2 SV=1
Length = 613
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 113/272 (41%), Gaps = 19/272 (6%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I+A AF L NL L L R I G+ GL L L+I + D
Sbjct: 98 NIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 155
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 156 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 214
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 215 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGL----NLTSLSITHCNLTS 270
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL---SFTGISDGSLRKLAGL 347
V++ L L+ L LS + + L L L+ I L T + + R GL
Sbjct: 271 IPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFR---GL 327
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ L+ LN+ +T +A S+ L L L
Sbjct: 328 NYLRILNVSGNLLTTLEESAFHSVGNLETLIL 359
>sp|Q3EC97|FBL14_ARATH F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2
SV=1
Length = 480
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 156/402 (38%), Gaps = 87/402 (21%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK-DCSNLQSLDFNF 90
AL LC ++P ++ +++I S S L G V D GL+ L +C +L L +F
Sbjct: 68 ALLSLC-RRFPNLSK--VEIIYSGWMSKL-----GKQVDDQGLLVLTTNCHSLTDLTLSF 119
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHG--G 147
C I+D G+ HL L+SL IT G+ + A G L +L L RC +
Sbjct: 120 CTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEW 179
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
L L LE L IK C I + D+ L + L SLQ D+ Y+K +
Sbjct: 180 LEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLTSLQFE----VDANYRYMKVYDQ- 234
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L++E P L SL L+L C ++ G +
Sbjct: 235 --LDVERWP------KQLVPCDSLVELSLGNCIIAP---------------GRGLACVLR 271
Query: 267 ECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-------------------GLCNLKCLE 306
C NLE L+LD C G+ D ++ L L N L
Sbjct: 272 NC-------KNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLR 324
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS-----------SLKSLNL 355
L+D + S+ +H S LES +SF SDG L + ++ L+L
Sbjct: 325 LTDESL-SAIAQHCS---KLESFKISF---SDGEFPSLFSFTLQGIITLIQKCPVRELSL 377
Query: 356 DARQI-TDTGLAALTSLTGLTHLDLFGARITDSGAAYLRSKF 396
D + D G+ AL S L L+L + L S+F
Sbjct: 378 DHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQF 419
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 27 AFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLS-GSD------------VTDS 72
R+C L+ L L GV+D + + + S L S+ L SD +TD
Sbjct: 269 VLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLRLTDE 328
Query: 73 GLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
L + + CS L+S +F SDG L SF T QG+
Sbjct: 329 SLSAIAQHCSKLESFKISF----SDGEFPSL--------FSF------TLQGIITLIQKC 370
Query: 132 NLVKLDLER-CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-C 189
+ +L L+ C G+ L KLE L + C ++D + +S +L L++S C
Sbjct: 371 PVRELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSKC 430
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCP 215
VTD G+ L G KL LL +E CP
Sbjct: 431 LGVTDDGMRPLVGSHKLELLVVEDCP 456
>sp|Q8IY22|CMIP_HUMAN C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3
Length = 773
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT-GLCNLKCLELSD 309
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +
Sbjct: 661 FGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCE 720
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 355
T V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 721 TPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLDARQ 359
NL+ L L+ T V S+ HL L +L+ +NL T D LR L+ L+ L+ LNL
Sbjct: 663 NLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRSKF 396
+TD GL AL+S+ L L++ +++ L++K
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKL 759
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCP 215
LE+L++ + N +T + + L L +LK L + ++ D+G+ L + L L +LNL P
Sbjct: 664 LENLSLAFTN-VTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLGFNE 263
VT A L +LS++ SL LN+N +LS D E +K+ +LK +++ + E
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYTE 771
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLD 284
+ G+L L+L ++ E K+ SLK LNL + D L L + LT L+ LNL
Sbjct: 660 SFGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLC 719
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFT 334
+ D GL+ L+ + +L L ++ T++ + L L NL+ +++ +T
Sbjct: 720 ETPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYT 770
>sp|Q9D486|CMIP_MOUSE C-Maf-inducing protein OS=Mus musculus GN=Cmip PE=2 SV=3
Length = 773
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 251 IGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLT-GLCNLKCLELSD 309
G+L+ L+L F +T C HL L +L+ LNL S GD GL L+ L L+ L L +
Sbjct: 661 FGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCE 720
Query: 310 TQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKL-AGLSSLKSLNL 355
T V +GL LS + +L S+N++ T +S + L A L +LK +++
Sbjct: 721 TPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDV 767
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 301 NLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLDARQ 359
NL+ L L+ T V S+ HL L +L+ +NL T D LR L+ L+ L+ LNL
Sbjct: 663 NLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 360 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRSKF 396
+TD GL AL+S+ L L++ +++ L++K
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKL 759
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCP 215
LE+L++ + N +T + + L L +LK L + ++ D+G+ L + L L +LNL P
Sbjct: 664 LENLSLAFTN-VTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLCETP 722
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF-SKIGSLKVLNLGFNE 263
VT A L +LS++ SL LN+N +LS D E +K+ +LK +++ + E
Sbjct: 723 VTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYTE 771
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLD 284
+ G+L L+L ++ E K+ SLK LNL + D L L + LT L+ LNL
Sbjct: 660 SFGNLENLSLAFTNVTSACAEHLIKLPSLKQLNLWSTQFGDAGLRLLSEHLTMLQVLNLC 719
Query: 285 SCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG-LTNLESINLSFT 334
+ D GL+ L+ + +L L ++ T++ + L L NL+ +++ +T
Sbjct: 720 ETPVTDAGLLALSSMKSLCSLNMNSTKLSADTYEDLKAKLPNLKEVDVRYT 770
>sp|Q6R5N8|TLR13_MOUSE Toll-like receptor 13 OS=Mus musculus GN=Tlr13 PE=1 SV=1
Length = 991
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 118/266 (44%), Gaps = 18/266 (6%)
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK-------G 153
+L+ L L SL+ I + + A L NL +DL HG L ++K
Sbjct: 289 YLKTLPQLKSLNLS-GTVIKLENLSA-KHLQNLRAMDLSNWELRHGHL-DMKTVCHLLGN 345
Query: 154 LMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK----VTDSGIAYLKGLQKLTLL 209
L KLE+L + N +K L+ T L L + + + DS L LQKL
Sbjct: 346 LPKLETLVFQ-KNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKL--- 401
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
NL C ++ + S+L +L L+L+ + FS + L+ L+L N IT+
Sbjct: 402 NLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNN 461
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESI 329
+ GL L+ LNL +C I + T NL+ L+L D + + L L+S+
Sbjct: 462 LAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSL 521
Query: 330 NLSFTGISDGSLRKLAGLSSLKSLNL 355
LS + +GL++L+SL+L
Sbjct: 522 ILSHNCLKILEPNSFSGLTNLRSLDL 547
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 147/378 (38%), Gaps = 96/378 (25%)
Query: 86 LDFNFCIQISDGGLEHLRGLSNLTSLSFRRN----------------------NAITAQG 123
L++N +I +G RGL NLT L+ N N IT
Sbjct: 134 LEWNSIWKIDEGAF---RGLENLTLLNLVENKIQSVNNSFEGLSSLKTLLLSHNQITHIH 190
Query: 124 MKAFAGLINLVKLDLER--CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
AF LI L L L R + G L ++ L LE L++ N I D P S L +
Sbjct: 191 KDAFTPLIKLKYLSLSRNNISDFSGILEAVQHLPCLERLDLT-NNSIMYLDHSPRS-LVS 248
Query: 182 LKSLQISCSKVTDSGIA-----------------------YLKGLQKLTLLNLEGCPVTA 218
L L +K+ + + YLK L +L LNL G T
Sbjct: 249 LTHLSFEGNKLRELNFSALSLPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSG---TV 305
Query: 219 ACLDSLSA--LGSLFYLNLNRCQLSD------------------------------DGCE 246
L++LSA L +L ++L+ +L +G +
Sbjct: 306 IKLENLSAKHLQNLRAMDLSNWELRHGHLDMKTVCHLLGNLPKLETLVFQKNVTNAEGIK 365
Query: 247 KFSKIGSLKVLNLGFNEITDECLVHLK-----GLTNLESLNLDSCGIGDEGLVNLTGLCN 301
+ +K L L+LG N +D L++L L +L+ LNL+ C + + L N
Sbjct: 366 QLAKCTRLLFLDLGQN--SD--LIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQN 421
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L L+LS + S S L +LE ++LS I++ + +GL +LK LNL A I
Sbjct: 422 LTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIV 481
Query: 362 DTGLAALTSLTGLTHLDL 379
+ T L LDL
Sbjct: 482 TIDRYSFTQFPNLEVLDL 499
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 127/346 (36%), Gaps = 71/346 (20%)
Query: 71 DSGLIHLKDC-----SNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--------- 116
+S LI+L D +LQ L+ N C Q+S L NLTSL N
Sbjct: 381 NSDLIYLNDSEFNALPSLQKLNLNKC-QLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFA 439
Query: 117 --------------NAITAQGMKAFAGLINLVKLDLERCTRI------------------ 144
N IT AF+GL L +L+L C +
Sbjct: 440 FSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDL 499
Query: 145 ---------HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDS 195
HG LK KL+SL + NC+ + SGLTNL+SL + + ++
Sbjct: 500 GDNNIRTLNHGTFRPLK---KLQSLILS-HNCLKILEPNSFSGLTNLRSLDLMYNSLSYF 555
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLS-----ALGSLFYLNL--NRCQLSDDGCEKF 248
GL+KL +L L +T +L L SL LNL R + F
Sbjct: 556 HEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFF 615
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV----NLTGLCNLKC 304
+GSL+ L LG N L NL L++ GD L L LK
Sbjct: 616 QGLGSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKI 675
Query: 305 LELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
L L + + S S L +L+ +L F + + L L SL
Sbjct: 676 LRLENNNLESLVPDMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSL 721
>sp|Q13045|FLII_HUMAN Protein flightless-1 homolog OS=Homo sapiens GN=FLII PE=1 SV=2
Length = 1269
Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 151 LKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY-LKGLQKLTLL 209
L L KLE L++ N T LS L +L+++ + + +SG+ + L L++L
Sbjct: 52 LAALQKLEHLSVSHNNLTTLHG--ELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVL 109
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL 269
+L +T C L ++ LNL+ + + F + L L+L N + +
Sbjct: 110 DLSHNQLTE-CPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRL-ESLP 167
Query: 270 VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGL-RHLSGLTNLES 328
++ L +L++L L+ + L L + L+ L L TQ S L L GL+NL
Sbjct: 168 PQMRRLVHLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLAD 227
Query: 329 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
++LS ++ L L SL+ LNL + QIT+ L
Sbjct: 228 VDLSCNDLTRVP-ECLYTLPSLRRLNLSSNQITELSL 263
Score = 34.7 bits (78), Expect = 1.4, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L++L L L +H L L + L++L+++ + L GL+NL + +SC
Sbjct: 173 LVHLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSC 232
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVT--AACLDSLSALGSLFYLNLNRCQLS 241
+ +T L L L LNL +T + C+D + + LNL+R QL+
Sbjct: 233 NDLTRVP-ECLYTLPSLRRLNLSSNQITELSLCIDQWVHVET---LNLSRNQLT 282
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 146/342 (42%), Gaps = 63/342 (18%)
Query: 56 GSSLLSVDLSG-SDVTDSGL-IHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLS 112
G L + L G +V DS L C NL+ L C +++D E+L R L L+
Sbjct: 122 GGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLN 181
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
++IT + MK G L LNI WC+ I D
Sbjct: 182 LENCSSITDRAMKYIGD-----------------------GCPNLSYLNISWCDAIQDRG 218
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGSL 230
++ + L+N KSL L L GC +T S+ A +G++
Sbjct: 219 VQII--LSNCKSLDT---------------------LILRGCEGLTENVFGSVEAHMGAI 255
Query: 231 FYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVHL-KGLTNLESLNLDSC 286
LNL +C QL+D + + +L+ L + N+I+D LV L + NL+ L L C
Sbjct: 256 KKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGC 315
Query: 287 G-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISDGSL 341
+GD G + L C L+ L++ D + + L+ T L ++LS I+D S+
Sbjct: 316 TLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESI 375
Query: 342 RKLAG--LSSLKSLNLD-ARQITDTGLAALTSLTGLTHLDLF 380
+ LA +L L LD Q+TD+ L+ L L +DL+
Sbjct: 376 QNLASKHRETLNVLELDNCPQLTDSTLSHLRHCKALKRIDLY 417
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 23/249 (9%)
Query: 67 SDVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEH-LRGLSNLTSLSFRRNNAITAQ-- 122
S +TD + ++ D C NL L+ ++C I D G++ L +L +L R +T
Sbjct: 186 SSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRGCEGLTENVF 245
Query: 123 -GMKAFAGLINLVKLDLERCTRIHGGLVN--LKGLMKLESLNIKWCNCITDSDMKPLSGL 179
++A G I KL+L +C ++ V G LE L + CN I+D + L
Sbjct: 246 GSVEAHMGAIK--KLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQH 303
Query: 180 T-NLKSLQIS-CSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLN 234
+ NLK L++S C+ + D+G I +G ++L L++E C ++ ++SL+ +L L+
Sbjct: 304 SHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELS 363
Query: 235 LNRCQLSDDGCEKFSKIGS-----LKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-G 287
L+ C+L D E + S L VL L ++TD L HL+ L+ ++L C
Sbjct: 364 LSHCELITD--ESIQNLASKHRETLNVLELDNCPQLTDSTLSHLRHCKALKRIDLYDCQN 421
Query: 288 IGDEGLVNL 296
+ E +V
Sbjct: 422 VSKEAIVRF 430
>sp|O94898|LRIG2_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Homo sapiens GN=LRIG2 PE=2 SV=3
Length = 1065
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 7/231 (3%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLD 222
N I + + + L L+SL +S + +++ + +Q L LNL +T A C D
Sbjct: 130 NIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFD 188
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+LS+ SL + LNR ++S + F K+ L+ L L N I + +GL +L SL
Sbjct: 189 NLSS--SLLVVKLNRNRMSMIPPKIF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLK 245
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ GI GL N++ LEL + L GL L+ + +S I S
Sbjct: 246 MQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPD 305
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
L L+L Q+T +A L+ L L+L R+T R
Sbjct: 306 AWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFR 356
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 114/292 (39%), Gaps = 47/292 (16%)
Query: 105 LSNLTSLSFRR---------NNAITAQGMKAFAGLIN---LVKLDLERCTRIHGGLVNLK 152
+S + + SF R NN IT F L + +VKL+ R + I + L
Sbjct: 156 ISEIKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLP 215
Query: 153 GL--MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLT 207
L ++L+ IK +T GL +L+SL++ SK+ D L +++L
Sbjct: 216 HLQFLELKRNRIKIVEGLT------FQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELE 269
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L + V L L L L+ ++S D E + L L+L +N++T
Sbjct: 270 LEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQR---LSELDLSYNQLTRL 326
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
GL+ LE LNL GD + T + R LS L L+
Sbjct: 327 DESAFVGLSLLERLNL-----GDNRV----------------THIADGVFRFLSNLQTLD 365
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
N + + + AGL+SL L L QI A L L HLDL
Sbjct: 366 LRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDL 417
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 130 LINLVKLDLERCT-RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L +L L+L+R +I GL +GL L SL ++ N I+ GL N++ L++
Sbjct: 214 LPHLQFLELKRNRIKIVEGLT-FQGLDSLRSLKMQ-RNGISKLKDGAFFGLNNMEELELE 271
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+ +T +L GL+ L L + + D+ L L+L+ QL+ F
Sbjct: 272 HNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAF 331
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DEGLVNLTGLCNLKCL 305
+ L+ LNLG N +T + L+NL++L+L + I ++ GL +L L
Sbjct: 332 VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKL 391
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L Q+ S + GL +LE ++L+ I
Sbjct: 392 ILQGNQIKSITKKAFIGLESLEHLDLNNNAI 422
>sp|Q9JJ28|FLII_MOUSE Protein flightless-1 homolog OS=Mus musculus GN=Flii PE=1 SV=1
Length = 1271
Score = 51.6 bits (122), Expect = 9e-06, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYL----KGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ +T+L+ L K+ +G+ YL LQKL L++ +T LS+L SL
Sbjct: 29 VKAMTSLRWL-----KLNRTGLCYLPEELAALQKLEHLSVSHNHLTT-LHGELSSLPSLR 82
Query: 232 YLNLNRCQLSDDGC-EKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG- 289
+ L + G + K+ L VL+L N++T EC L+ N+ LNL GI
Sbjct: 83 AIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLT-ECPRELENAKNMLVLNLSHNGIDS 141
Query: 290 --DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL 347
++ +NLT +L L+LS+ ++ S + L +L+++ L+ + LR+L +
Sbjct: 142 IPNQLFINLT---DLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAM 197
Query: 348 SSLKSLNLDARQITDTGLAALTSLTGLTHL 377
+L++L+L Q T + L TSL GL++L
Sbjct: 198 MALQTLHLRNTQRTQSNLP--TSLEGLSNL 225
Score = 36.2 bits (82), Expect = 0.50, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 130 LINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISC 189
L++L L L +H L L +M L++L+++ + L GL+NL + +SC
Sbjct: 173 LVHLQTLVLNGNPLLHAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSC 232
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCPVT--AACLDSLSALGSLFYLNLNRCQLS 241
+ +T L L L LNL + + C+D L + LNL+R QL+
Sbjct: 233 NDLTRVP-ECLYTLPSLRRLNLSSNQIAELSLCIDQWVHLET---LNLSRNQLT 282
>sp|Q9GZU5|NYX_HUMAN Nyctalopin OS=Homo sapiens GN=NYX PE=1 SV=1
Length = 481
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 17/210 (8%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT------RIHGGLVNLKGLM 155
+GL L L N + + FA L L +LDL C R+ L L+ L
Sbjct: 106 FKGLPRLAELRLAHNGDLRYLHARTFAALSRLRRLDLAACRLFSVPERLLAELPALRELA 165
Query: 156 KLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP 215
++L + L GL NL + ++ + L+GL++L L+L+
Sbjct: 166 AFDNLFRRVPGA--------LRGLANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANR 217
Query: 216 VTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGL 275
V A + G L +L LN L++ + F + L+ LNLG N + L
Sbjct: 218 VRAVHAGAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADL 277
Query: 276 TNLESLNLDSCGIG--DEG-LVNLTGLCNL 302
LE L LD I +EG NL+GL L
Sbjct: 278 AELELLYLDRNSIAFVEEGAFQNLSGLLAL 307
Score = 38.5 bits (88), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 110/272 (40%), Gaps = 29/272 (10%)
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKW-CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
RC R GL+ + + E+++I N + + L +L+ L + + ++
Sbjct: 47 RCDR--AGLLRVPAELPCEAVSIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPG 104
Query: 199 YLKGLQKLTLLNL-EGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL 257
KGL +L L L + + +AL L L+L C+L +++ +L+ L
Sbjct: 105 AFKGLPRLAELRLAHNGDLRYLHARTFAALSRLRRLDLAACRLFSVPERLLAELPALREL 164
Query: 258 NLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQV----- 312
F+ + L+GL NL +L+ I +L GL L+ L L +V
Sbjct: 165 A-AFDNLFRRVPGALRGLANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAVHA 223
Query: 313 GSSG----LRHL---------------SGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
G+ G L HL GL L ++NL + + A L+ L+ L
Sbjct: 224 GAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELL 283
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
LD I A +L+GL L L G R+T
Sbjct: 284 YLDRNSIAFVEEGAFQNLSGLLALHLNGNRLT 315
>sp|Q8N461|FXL16_HUMAN F-box/LRR-repeat protein 16 OS=Homo sapiens GN=FBXL16 PE=1 SV=2
Length = 479
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
+ D ++V+ Q ++ ++LSG +D T++GL + + SL + CI ++D + +
Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLS-ARITSLSVSDCINVADDAIAAI 263
Query: 103 RG-LSNLTSLSFRRNNA--------------------------ITAQG-MKAFAGLINLV 134
L NL LS + + IT G + L NL
Sbjct: 264 SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLT 323
Query: 135 KLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI-SCS 190
L L C+++ V L + L KL SL++ WC ITD ++ ++ L L+ L + C
Sbjct: 324 ALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCV 383
Query: 191 KVTDSGIAYLKGLQKLTLLNLEGC 214
++TD+G++YL + L L L C
Sbjct: 384 RITDTGLSYLSTMSSLRSLYLRWC 407
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 145
L G+S+L F N A++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYALSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG-LTNLKSLQISCSKVTDSGIAYL---K 201
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 202 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 258
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 259 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGS 314
L + ITD L ++ L LE L LD C I D GL L+ + +L+ L L QV
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 315 SGLRH 319
GL+H
Sbjct: 413 FGLKH 417
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 16/212 (7%)
Query: 182 LKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRC 238
+K++ + S +TD+G+ L+ +Q + L L GC A SLSA + L+++ C
Sbjct: 195 VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA--RITSLSVSDC 252
Query: 239 -QLSDDGCEKFSKI-GSLKVLNLGFNEITDECLVHLKGLT--NLESLNLDSCG-IGDEGL 293
++DD S++ +L L+L +TD L + + +L L SC I + G+
Sbjct: 253 INVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGV 312
Query: 294 VNLT-GLCNLKCLELSD-TQVGSSGLRHLS-GLTNLESINLSF-TGISDGSLRKLA-GLS 348
VN+ L NL L LS ++V G+ ++ L L S++LS+ I+D +L +A L
Sbjct: 313 VNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLH 372
Query: 349 SLKSLNLD-ARQITDTGLAALTSLTGLTHLDL 379
L+ L LD +ITDTGL+ L++++ L L L
Sbjct: 373 RLEELVLDRCVRITDTGLSYLSTMSSLRSLYL 404
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEH 101
+TD+GL +L S+L+SL +C Q+ D GL+H
Sbjct: 385 ITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKH 417
>sp|Q708Y0|EBF2_ARATH EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1
SV=1
Length = 623
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 183/415 (44%), Gaps = 74/415 (17%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHL-KDCSNLQSLDFN 89
+L+ + L P V+D + IA + +DLS +TDSGL+ + ++C NL L +
Sbjct: 168 SLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTID 227
Query: 90 FCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMK---AFAG-LINLVKLDLERCTRI 144
C + + GL + R NL S+S R I QG+ A AG + VKL + + +
Sbjct: 228 SCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGL 287
Query: 145 -------HGGLV--------------------NLKGLMKLESLNIKWCNCITDSDMKPL- 176
+G V N KGL KL+SL++ C +TD ++ +
Sbjct: 288 SLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVG 347
Query: 177 SGLTNLKSLQIS-CSKVTDSG-IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+G +LK + ++ C V+ G +A K L L LE C ++ +G F +N
Sbjct: 348 NGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHR----INQFGLMG--FLMN 401
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLN-LGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEG 292
SK+ + + N LG ++ E + ++L SL++ C G GD
Sbjct: 402 CG------------SKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDAS 449
Query: 293 LVNLTGLCNLKCLELSDTQ------VGSSGLRHL--SGLTNLESINLS-FTGISDGSLRK 343
L L C+ +L D + V +G+R L S L +NLS +SD ++
Sbjct: 450 LAFLGKFCH----QLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSA 505
Query: 344 LAGL--SSLKSLNLDA-RQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLRS 394
++ +L+SLNLD + IT+ L A+ + + LD+ ++D G L S
Sbjct: 506 ISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISNTLVSDHGIKALAS 560
>sp|Q149C3|LIGO4_MOUSE Leucine-rich repeat and immunoglobulin-like domain containing-NOGO
receptor-interacting protein 4 OS=Mus musculus GN=Lingo4
PE=2 SV=2
Length = 593
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 100/241 (41%), Gaps = 30/241 (12%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP---VTAACLDSLSALGSLFY 232
LS L L+ L +S ++++ GLQ L L L+G V L+AL +L
Sbjct: 80 LSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTAL-TLLD 138
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 289
L LN+ L DG FS++GSL+ L +G N + GL L ++ L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVP 196
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE----------------SINLSF 333
L L L L+ EL ++ + LR L L LE +NLS
Sbjct: 197 GLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLNLSS 256
Query: 334 TGI-----SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 388
I S + L LS L+ L+L I+ L+ L L L L GA +T
Sbjct: 257 LAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIA 316
Query: 389 A 389
A
Sbjct: 317 A 317
Score = 39.3 bits (90), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 33/255 (12%)
Query: 58 SLLSVDLSGSD--VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
SLL++ L G+ + G+ L L N + DG L L L
Sbjct: 109 SLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEV----G 164
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+N + AFAGL L + LERC L + GL
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTITLERCN-----LSTVPGLA-------------------- 199
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLN 234
L+ L L +L++ + L+GL +L L + P A LD S +G +L L
Sbjct: 200 LAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEA-LDPGSLVGLNLSSLA 258
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ RC LS + + L++L+L N I+ L L L+ L L +
Sbjct: 259 ITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAH 318
Query: 295 NLTGLCNLKCLELSD 309
GL L+++D
Sbjct: 319 AFHGLTAFHLLDVAD 333
>sp|Q8CDU4|FXL13_MOUSE F-box/LRR-repeat protein 13 OS=Mus musculus GN=Fbxl13 PE=2 SV=2
Length = 790
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 28/349 (8%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRN 116
++L ++ G D L + C NLQ L+ + C +D + H+ G + L+ N
Sbjct: 306 NVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNL-SN 364
Query: 117 NAITAQGMKAFAGLI-NLVKLDLERCTRI-HGGLVNL---KGLMKLESLNIKWCNCITDS 171
IT + M+ NL L L C + GL L G KL L++ C +
Sbjct: 365 TTITNRTMRLLPRYFHNLQNLSLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGCTQVLVE 424
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGS 229
+S + + S IS DS L L + EG ++ AC S+
Sbjct: 425 KCPRISSVVLIGSPHIS-----DSAFKALSSCD-LKKIRFEGNKRISDACFKSIDRNYPG 478
Query: 230 LFYLNLNRCQ-LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHL---KGLTNLESLNLD 284
+ ++ + C+ L+D + S + L VLNL I D L H L LNL
Sbjct: 479 INHIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLT 538
Query: 285 SCG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSL 341
+C +GD ++ L+ C NL L L + + + + +++ + +L S++LS T IS+ +
Sbjct: 539 NCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGM 598
Query: 342 RKLAGLSSLKSLNL-DARQITDTGLAAL--TSLTGLTHLDL-FGARITD 386
L+ L+ +++ D ITD G+ A TSL L HLD+ + +++TD
Sbjct: 599 TILSRHRKLREVSVSDCVNITDFGIRAYCKTSLL-LEHLDVSYCSQLTD 646
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG------------ 178
+N+++L+ C L + L+ LN+ C TD M+ +S
Sbjct: 305 LNVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSN 364
Query: 179 --------------LTNLKSLQIS-CSKVTDSGIAYLK---GLQKLTLLNLEGCPVTAAC 220
NL++L ++ C K TD G+ YL G KL L+L GC T
Sbjct: 365 TTITNRTMRLLPRYFHNLQNLSLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGC--TQVL 422
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLE 279
++ + S+ + +SD + S K+ G I+D C + + +
Sbjct: 423 VEKCPRISSVVLIG--SPHISDSAFKALSSCDLKKIRFEGNKRISDACFKSIDRNYPGIN 480
Query: 280 SLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGSSGLRHL-SGLTNLESINLSFTGI 336
+ + C G+ D L +L+ L L L L++ ++G GL+H G ++ L+ T
Sbjct: 481 HIYMVDCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNC 540
Query: 337 S---DGSLRKLAGL-SSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
S D S+ +L+ +L LNL + +TD + + S+ L +DL G I++ G
Sbjct: 541 SLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTI 600
Query: 392 L 392
L
Sbjct: 601 L 601
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 30/176 (17%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL+SVDLSG+ +++ G+ L L+ + + C+ I+D G +R + L
Sbjct: 582 SLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFG---IRAYCKTSLL------ 632
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM--KLESLNIKWCNCITDSDMKP 175
L LD+ C+++ ++ + ++ SLNI C ITD+ M+
Sbjct: 633 ---------------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEI 677
Query: 176 LSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCP-VTAACLDSLSAL 227
LS + L L IS C ++TD I L+ G ++L +L ++ C ++ A +S++
Sbjct: 678 LSARCHYLHILDISGCIQLTDQIIQDLQIGCKQLRILKMQFCKSISPAAAQKMSSV 733
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 137/332 (41%), Gaps = 81/332 (24%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
YPG+N +M VD G +TDS L L L L+ CI+I D GL+
Sbjct: 476 YPGINHIYM------------VDCKG--LTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLK 521
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
H S+ R N + G ++++L ERC +H L
Sbjct: 522 HF--FDGPASIRLRELNLTNC----SLLGDSSVIRLS-ERCPNLH-------------YL 561
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP----- 215
N++ C +TD ++ ++ + +L S+ +S + +++ G+ L +KL +++ C
Sbjct: 562 NLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDF 621
Query: 216 -VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLK 273
+ A C SL L +L+++ C QL+DD I ++ +
Sbjct: 622 GIRAYCKTSL----LLEHLDVSYCSQLTDDI------IKTIAIF---------------- 655
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLTGLCNL-------KCLELSDTQVGSSGLRHLSGLTN 325
T + SLN+ C I D G+ L+ C+ C++L+D + + G
Sbjct: 656 -CTRITSLNIAGCPKITDAGMEILSARCHYLHILDISGCIQLTDQIIQDLQI----GCKQ 710
Query: 326 LESINLSF-TGISDGSLRKLAGLSSLKSLNLD 356
L + + F IS + +K++ + + N D
Sbjct: 711 LRILKMQFCKSISPAAAQKMSSVVQHQEYNSD 742
>sp|Q99MB1|TLR3_MOUSE Toll-like receptor 3 OS=Mus musculus GN=Tlr3 PE=1 SV=2
Length = 905
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 137/356 (38%), Gaps = 73/356 (20%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ S+ T SGL +NL LD ++ + D G L +L LS NN I
Sbjct: 262 LATSESTFSGL----KWTNLTQLDLSYN-NLHDVGNGSFSYLPSLRYLSLEYNN-IQRLS 315
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC----------NCITDSDM 173
++F GL NL L L+R V+L ++ + +W N I +
Sbjct: 316 PRSFYGLSNLRYLSLKRAFTKQS--VSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKS 373
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+GL +LK L S SK S L+ L T ++L P L L
Sbjct: 374 NTFTGLVSLKYL--SLSKTFTS----LQTLTNETFVSLAHSP--------------LLTL 413
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNL--------ESLNLD 284
NL + +S FS +G L++L+LG NEI + +GL N+ + L L
Sbjct: 414 NLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLS 473
Query: 285 SCGIG------------------DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
+ D L NL L+LS+ + + L GL NL
Sbjct: 474 TSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENL 533
Query: 327 ESINLSFTGISD--------GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
E ++ ++ G + L GLS L LNL++ + + + +L L
Sbjct: 534 EILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNLFEL 589
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,168,574
Number of Sequences: 539616
Number of extensions: 5272991
Number of successful extensions: 15355
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 448
Number of HSP's that attempted gapping in prelim test: 12397
Number of HSP's gapped (non-prelim): 2174
length of query: 396
length of database: 191,569,459
effective HSP length: 120
effective length of query: 276
effective length of database: 126,815,539
effective search space: 35001088764
effective search space used: 35001088764
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)