Query 016018
Match_columns 396
No_of_seqs 173 out of 1635
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 06:29:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016018.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016018hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e31_A FBS1, F-box only protei 99.2 1.1E-11 3.6E-16 112.4 4.6 51 1-51 48-99 (297)
2 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 1.6E-11 5.3E-16 82.2 2.7 44 2-45 7-50 (53)
3 4asc_A Kelch repeat and BTB do 99.1 3.9E-08 1.3E-12 91.0 25.5 199 122-353 68-283 (315)
4 2woz_A Kelch repeat and BTB do 99.1 1.1E-07 3.7E-12 88.2 25.9 198 123-353 80-293 (318)
5 2vpj_A Kelch-like protein 12; 99.0 1.4E-07 4.9E-12 86.4 23.6 212 107-354 58-285 (301)
6 1zgk_A Kelch-like ECH-associat 99.0 1.2E-07 4.1E-12 87.4 22.8 199 121-355 90-295 (308)
7 2xn4_A Kelch-like protein 2; s 98.9 2.7E-07 9.4E-12 84.6 23.1 213 108-354 58-283 (302)
8 3ii7_A Kelch-like protein 7; p 98.9 2.2E-07 7.7E-12 85.4 22.4 217 107-354 51-279 (306)
9 2uvk_A YJHT; unknown function, 98.9 1E-07 3.6E-12 89.7 18.6 229 107-355 15-302 (357)
10 3ii7_A Kelch-like protein 7; p 98.8 4.8E-07 1.6E-11 83.2 21.8 199 121-354 24-232 (306)
11 2vpj_A Kelch-like protein 12; 98.8 1.3E-06 4.4E-11 80.0 22.4 198 121-354 31-238 (301)
12 4asc_A Kelch repeat and BTB do 98.7 1.3E-06 4.4E-11 80.7 20.8 205 121-354 13-228 (315)
13 2xn4_A Kelch-like protein 2; s 98.7 1.7E-06 5.9E-11 79.2 21.1 199 121-354 30-236 (302)
14 2ovr_B FBW7, F-BOX/WD repeat p 98.7 2.5E-05 8.6E-10 75.3 30.4 48 3-50 18-65 (445)
15 1zgk_A Kelch-like ECH-associat 98.7 8.2E-07 2.8E-11 81.8 18.2 200 121-354 39-247 (308)
16 3v7d_B Cell division control p 98.7 6E-05 2.1E-09 72.8 31.4 44 4-47 15-59 (464)
17 2woz_A Kelch repeat and BTB do 98.6 4.9E-06 1.7E-10 76.8 19.0 202 122-354 25-238 (318)
18 2zwa_A Leucine carboxyl methyl 98.5 9.8E-06 3.3E-10 83.3 20.7 216 110-356 396-644 (695)
19 1p22_A F-BOX/WD-repeat protein 98.4 6.2E-05 2.1E-09 72.4 23.6 46 5-50 12-61 (435)
20 2uvk_A YJHT; unknown function, 98.4 2.6E-05 9E-10 73.0 20.2 205 121-354 86-349 (357)
21 3l2o_B F-box only protein 4; s 98.0 8.8E-07 3E-11 79.4 1.2 50 3-52 4-53 (312)
22 2ast_B S-phase kinase-associat 97.6 1.9E-05 6.5E-10 73.3 2.6 42 2-43 7-48 (336)
23 1k3i_A Galactose oxidase precu 97.5 0.0014 4.6E-08 66.8 15.3 230 106-354 248-504 (656)
24 1k3i_A Galactose oxidase precu 97.5 0.0016 5.4E-08 66.4 15.4 195 122-354 220-448 (656)
25 2zwa_A Leucine carboxyl methyl 97.4 0.0036 1.2E-07 64.2 16.0 169 164-355 400-591 (695)
26 2p1m_B Transport inhibitor res 96.9 0.00025 8.6E-09 71.0 1.8 35 3-37 5-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.0012 4.2E-08 66.0 1.8 33 5-37 14-47 (592)
28 3jrp_A Fusion protein of prote 92.2 6.2 0.00021 35.4 20.1 68 276-349 171-242 (379)
29 3jro_A Fusion protein of prote 91.4 14 0.00047 37.7 19.9 67 277-349 170-240 (753)
30 4gga_A P55CDC, cell division c 90.2 12 0.0004 34.8 18.0 196 109-352 114-315 (420)
31 3ei3_B DNA damage-binding prot 85.7 20 0.00069 32.3 21.3 198 109-350 82-285 (383)
32 2z2n_A Virginiamycin B lyase; 85.6 17 0.00057 31.3 20.3 192 106-351 104-299 (299)
33 3scy_A Hypothetical bacterial 83.7 20 0.00067 32.2 13.5 105 241-354 233-346 (361)
34 4aez_A CDC20, WD repeat-contai 82.7 29 0.00098 31.7 20.3 189 111-351 103-297 (401)
35 3q7m_A Lipoprotein YFGL, BAMB; 81.6 28 0.00096 31.5 13.8 116 213-353 48-168 (376)
36 3dwl_C Actin-related protein 2 80.0 29 0.001 31.0 13.3 29 322-350 210-239 (377)
37 1ri6_A Putative isomerase YBHE 79.2 32 0.0011 30.0 18.3 73 276-354 241-317 (343)
38 3e5z_A Putative gluconolactona 78.7 32 0.0011 29.8 20.9 205 113-356 42-255 (296)
39 4e54_B DNA damage-binding prot 78.2 23 0.00079 32.9 12.3 197 111-350 131-330 (435)
40 1yfq_A Cell cycle arrest prote 77.6 36 0.0012 29.8 18.7 197 109-351 65-286 (342)
41 1k8k_C P40, ARP2/3 complex 41 76.9 39 0.0013 29.9 15.7 68 276-353 213-282 (372)
42 1l0q_A Surface layer protein; 76.4 43 0.0015 30.1 17.0 190 109-352 82-280 (391)
43 2dg1_A DRP35, lactonase; beta 71.3 49 0.0017 29.0 12.1 113 218-353 55-177 (333)
44 4a2l_A BT_4663, two-component 70.8 95 0.0032 31.5 21.1 201 111-350 320-529 (795)
45 3dsm_A Uncharacterized protein 70.7 57 0.0019 28.9 21.0 200 111-355 2-221 (328)
46 3hfq_A Uncharacterized protein 70.3 57 0.002 28.7 23.3 74 275-354 249-326 (347)
47 3q7m_A Lipoprotein YFGL, BAMB; 70.1 38 0.0013 30.5 11.3 112 214-353 99-213 (376)
48 3sjl_D Methylamine dehydrogena 69.9 43 0.0015 31.1 11.5 118 218-357 237-374 (386)
49 4e54_B DNA damage-binding prot 69.7 69 0.0024 29.5 16.8 29 323-351 406-434 (435)
50 3hfq_A Uncharacterized protein 67.7 51 0.0017 29.1 11.5 104 240-353 17-124 (347)
51 1q7f_A NHL, brain tumor CG1071 67.0 59 0.002 27.7 19.4 204 106-355 35-246 (286)
52 2ad6_A Methanol dehydrogenase 66.6 51 0.0018 32.3 12.0 118 213-353 57-191 (571)
53 3jrp_A Fusion protein of prote 65.1 73 0.0025 28.0 18.2 70 277-353 221-294 (379)
54 3bws_A Protein LP49; two-domai 64.9 83 0.0028 28.6 15.6 196 109-352 178-395 (433)
55 1rwi_B Serine/threonine-protei 63.7 65 0.0022 27.0 17.1 189 106-349 72-266 (270)
56 2mad_H Methylamine dehydrogena 63.6 88 0.003 28.5 13.3 56 293-353 298-356 (373)
57 1q7f_A NHL, brain tumor CG1071 62.2 73 0.0025 27.1 22.9 190 109-347 86-280 (286)
58 3g4e_A Regucalcin; six bladed 61.6 80 0.0027 27.3 18.1 204 111-356 24-239 (297)
59 3nol_A Glutamine cyclotransfer 58.9 91 0.0031 27.1 13.7 97 241-355 65-164 (262)
60 3e5z_A Putative gluconolactona 58.7 87 0.003 26.8 16.6 92 241-352 193-291 (296)
61 4gqb_B Methylosome protein 50; 58.1 1E+02 0.0035 27.5 18.7 197 109-353 91-295 (344)
62 1kv9_A Type II quinohemoprotei 58.1 90 0.0031 31.1 12.2 118 213-353 61-193 (668)
63 3hrp_A Uncharacterized protein 58.0 1.2E+02 0.004 28.1 13.8 111 218-353 141-255 (409)
64 2ojh_A Uncharacterized protein 57.0 85 0.0029 26.2 17.0 204 106-354 47-265 (297)
65 1kb0_A Quinohemoprotein alcoho 56.8 60 0.0021 32.5 10.6 118 213-353 72-205 (677)
66 3dwl_C Actin-related protein 2 55.5 1.1E+02 0.0038 27.0 13.4 56 293-350 229-284 (377)
67 1nir_A Nitrite reductase; hemo 55.2 1.5E+02 0.0052 28.5 13.7 106 241-351 346-462 (543)
68 3mmy_A MRNA export factor; mRN 53.6 1.1E+02 0.0038 26.5 18.2 29 323-351 279-308 (368)
69 1r5m_A SIR4-interacting protei 53.3 1.2E+02 0.0042 26.9 21.1 96 241-352 227-324 (425)
70 1l0q_A Surface layer protein; 51.7 1.3E+02 0.0045 26.7 19.5 191 106-351 37-237 (391)
71 2hqs_A Protein TOLB; TOLB, PAL 50.6 1.5E+02 0.0052 27.1 19.7 184 121-354 203-394 (415)
72 2oiz_A Aromatic amine dehydrog 49.6 1.5E+02 0.005 26.7 12.1 56 293-354 286-341 (361)
73 3hxj_A Pyrrolo-quinoline quino 49.2 1.3E+02 0.0044 25.9 10.8 31 323-353 220-250 (330)
74 3mbr_X Glutamine cyclotransfer 48.9 1.3E+02 0.0044 25.8 14.8 98 240-355 42-142 (243)
75 4g56_B MGC81050 protein; prote 48.6 1.5E+02 0.005 26.4 17.9 196 109-352 103-306 (357)
76 1k8k_C P40, ARP2/3 complex 41 48.2 1.4E+02 0.0048 26.1 20.6 31 321-351 206-237 (372)
77 2hqs_A Protein TOLB; TOLB, PAL 47.0 1.7E+02 0.0059 26.7 18.9 185 121-354 159-351 (415)
78 3dsm_A Uncharacterized protein 46.6 1.5E+02 0.0052 26.0 21.3 195 110-351 52-257 (328)
79 1yiq_A Quinohemoprotein alcoho 45.7 1.3E+02 0.0043 30.2 10.9 118 213-353 65-198 (689)
80 3bws_A Protein LP49; two-domai 45.4 1.7E+02 0.0059 26.3 11.6 100 242-352 145-248 (433)
81 2qc5_A Streptogramin B lactona 44.9 1.4E+02 0.0048 25.1 19.4 187 106-346 109-299 (300)
82 3nok_A Glutaminyl cyclase; bet 44.7 1.6E+02 0.0054 25.7 12.1 95 242-355 76-173 (268)
83 1gxr_A ESG1, transducin-like e 44.1 1.5E+02 0.0052 25.3 19.1 189 109-352 106-301 (337)
84 1w6s_A Methanol dehydrogenase 43.8 1.5E+02 0.0052 29.1 10.9 118 213-353 57-197 (599)
85 3sfz_A APAF-1, apoptotic pepti 43.0 96 0.0033 33.2 10.1 184 113-350 975-1161(1249)
86 1r5m_A SIR4-interacting protei 42.9 1.8E+02 0.0061 25.8 18.0 191 109-346 215-424 (425)
87 2qc5_A Streptogramin B lactona 42.9 1.5E+02 0.0051 24.9 21.7 195 104-354 23-224 (300)
88 4a11_B DNA excision repair pro 42.5 1.8E+02 0.0061 25.7 16.1 63 113-189 114-176 (408)
89 3mkq_A Coatomer beta'-subunit; 42.4 2.7E+02 0.0092 27.7 22.2 192 109-352 64-264 (814)
90 4ggc_A P55CDC, cell division c 42.2 1.6E+02 0.0054 25.0 19.1 67 109-190 34-100 (318)
91 3v9f_A Two-component system se 41.9 2.8E+02 0.0097 27.8 21.0 146 179-355 469-619 (781)
92 1rwi_B Serine/threonine-protei 41.7 1.5E+02 0.0051 24.6 11.2 106 218-353 77-186 (270)
93 2pm9_A Protein WEB1, protein t 41.7 1.9E+02 0.0065 25.7 17.0 94 242-349 241-339 (416)
94 3v9f_A Two-component system se 41.6 2.9E+02 0.0098 27.8 20.6 202 108-354 320-531 (781)
95 2kwv_A RAD30 homolog B, DNA po 40.8 14 0.0005 22.5 1.7 17 4-20 21-37 (48)
96 4a11_B DNA excision repair pro 40.7 1.9E+02 0.0065 25.5 18.9 52 293-350 316-368 (408)
97 3no2_A Uncharacterized protein 40.6 1.7E+02 0.006 25.0 12.0 103 242-354 57-162 (276)
98 1ddw_A GLGF-domain protein hom 40.6 41 0.0014 25.4 4.8 39 122-168 12-51 (120)
99 3vgz_A Uncharacterized protein 40.5 1.8E+02 0.0061 25.1 14.6 104 241-352 111-220 (353)
100 3sfz_A APAF-1, apoptotic pepti 39.9 3.7E+02 0.013 28.6 16.8 30 323-352 804-833 (1249)
101 3vgz_A Uncharacterized protein 39.0 1.9E+02 0.0065 25.0 22.5 201 111-352 100-308 (353)
102 1pjx_A Dfpase, DIISOPROPYLFLUO 38.4 96 0.0033 26.6 7.9 114 218-353 28-167 (314)
103 3mmy_A MRNA export factor; mRN 38.3 2E+02 0.0067 24.9 10.2 70 277-354 54-124 (368)
104 3u4y_A Uncharacterized protein 37.6 2E+02 0.0067 24.7 19.9 194 111-350 9-210 (331)
105 1got_B GT-beta; complex (GTP-b 36.1 2.2E+02 0.0075 24.9 19.8 94 241-350 164-260 (340)
106 2z2n_A Virginiamycin B lyase; 35.9 1.9E+02 0.0066 24.1 21.7 195 105-355 19-220 (299)
107 3odt_A Protein DOA1; ubiquitin 35.8 2E+02 0.0067 24.2 19.8 94 241-351 205-300 (313)
108 3c75_H MADH, methylamine dehyd 35.1 2.8E+02 0.0097 25.8 11.0 72 276-352 330-407 (426)
109 3dr2_A Exported gluconolactona 33.5 2.3E+02 0.0078 24.3 17.4 103 240-356 168-276 (305)
110 1pby_B Quinohemoprotein amine 33.0 2.3E+02 0.0078 24.1 9.9 97 242-355 220-319 (337)
111 3bg1_A Protein SEC13 homolog; 32.3 2.4E+02 0.0083 24.2 16.6 52 293-347 191-247 (316)
112 2iwa_A Glutamine cyclotransfer 31.4 2.5E+02 0.0087 24.2 14.6 99 240-355 43-144 (266)
113 1evh_A WH1 domain, protein (ME 30.4 69 0.0024 23.8 4.6 41 122-168 12-52 (112)
114 1gxr_A ESG1, transducin-like e 29.4 2.6E+02 0.0089 23.7 22.7 197 108-353 59-261 (337)
115 4h5i_A Guanine nucleotide-exch 29.2 2.3E+02 0.0078 25.2 9.0 66 276-350 144-209 (365)
116 1i2h_A PSD-ZIP45(homer-1C/VESL 28.9 76 0.0026 25.5 4.8 39 122-168 17-56 (168)
117 2bkl_A Prolyl endopeptidase; m 28.3 4.4E+02 0.015 25.9 22.4 191 122-354 203-404 (695)
118 3odt_A Protein DOA1; ubiquitin 28.3 2.6E+02 0.009 23.4 23.1 190 109-351 27-218 (313)
119 3frx_A Guanine nucleotide-bind 27.5 3E+02 0.01 23.7 9.5 57 293-350 42-99 (319)
120 3i2n_A WD repeat-containing pr 27.4 2.9E+02 0.01 23.6 20.3 57 293-349 284-355 (357)
121 3zwl_B Eukaryotic translation 27.2 3E+02 0.01 23.6 9.7 54 293-352 56-110 (369)
122 3o4h_A Acylamino-acid-releasin 26.4 4.2E+02 0.014 25.1 16.5 190 111-353 122-320 (582)
123 1flg_A Protein (quinoprotein e 26.3 4.5E+02 0.015 25.4 13.0 121 213-353 63-199 (582)
124 2z3z_A Dipeptidyl aminopeptida 26.3 4.6E+02 0.016 25.5 18.3 193 121-351 235-439 (706)
125 1sq9_A Antiviral protein SKI8; 25.9 3.4E+02 0.012 23.8 19.5 53 293-351 209-271 (397)
126 3zwl_B Eukaryotic translation 25.8 3.2E+02 0.011 23.5 19.1 55 293-352 199-254 (369)
127 2lyd_A Decapping protein 1; DC 25.8 59 0.002 25.1 3.5 34 330-363 30-63 (134)
128 1egx_A VAsp, vasodilator-stimu 25.4 96 0.0033 23.1 4.6 42 122-168 12-53 (115)
129 3f3f_A Nucleoporin SEH1; struc 25.2 3.1E+02 0.011 23.1 13.6 115 218-349 22-145 (351)
130 2hes_X YDR267CP; beta-propelle 25.2 3.3E+02 0.011 23.5 9.8 57 293-351 131-188 (330)
131 2aq5_A Coronin-1A; WD40 repeat 24.8 3.7E+02 0.013 23.9 22.2 205 111-354 93-308 (402)
132 2ghs_A AGR_C_1268P; regucalcin 24.4 3.5E+02 0.012 23.5 13.8 104 219-353 61-174 (326)
133 4gga_A P55CDC, cell division c 24.3 3.9E+02 0.013 24.0 11.2 55 293-351 127-182 (420)
134 3g4e_A Regucalcin; six bladed 24.2 3.3E+02 0.011 23.1 15.0 99 242-350 74-185 (297)
135 1yr2_A Prolyl oligopeptidase; 24.2 5.3E+02 0.018 25.5 16.6 113 218-353 327-447 (741)
136 1npe_A Nidogen, entactin; glyc 23.8 3.2E+02 0.011 22.7 18.0 192 110-354 46-246 (267)
137 1yfq_A Cell cycle arrest prote 23.5 3.4E+02 0.012 23.1 9.6 72 276-354 22-96 (342)
138 1k32_A Tricorn protease; prote 23.4 6.4E+02 0.022 26.2 14.0 35 322-356 612-648 (1045)
139 3iuj_A Prolyl endopeptidase; h 23.1 5.5E+02 0.019 25.3 17.6 143 179-355 259-413 (693)
140 4h5i_A Guanine nucleotide-exch 22.4 4E+02 0.014 23.5 14.2 75 275-351 229-304 (365)
141 3no2_A Uncharacterized protein 21.9 3.7E+02 0.013 22.8 10.8 100 241-352 99-200 (276)
142 2ecf_A Dipeptidyl peptidase IV 21.8 5.7E+02 0.019 25.0 16.7 210 107-353 216-465 (741)
143 3m0c_C LDL receptor, low-densi 21.6 6.5E+02 0.022 25.6 15.5 135 179-349 493-634 (791)
144 2dk7_A Transcription elongatio 20.7 85 0.0029 21.4 3.0 21 332-352 24-44 (73)
145 3fm0_A Protein CIAO1; WDR39,SG 20.4 4.3E+02 0.015 23.0 12.4 116 218-354 72-188 (345)
No 1
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.18 E-value=1.1e-11 Score=112.42 Aligned_cols=51 Identities=22% Similarity=0.480 Sum_probs=47.8
Q ss_pred CCCCCCCcHHHHHHHhhcCCccccc-cccccchhhhhhhCChHHHHHHHhcc
Q 016018 1 MAGFSDLPEELVFKILVLLPVDSLL-CSKCVQKSWYSLITNSRFVVKHLRNQ 51 (396)
Q Consensus 1 m~~~~~LP~Dll~eIL~rLP~~sl~-r~r~VcK~W~~li~~~~F~~~~~~~~ 51 (396)
|+++..||+||+.+||+|||+++|+ ||++|||+|++||+++.|.+.|..+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4567899999999999999999999 99999999999999999999998765
No 2
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.14 E-value=1.6e-11 Score=82.17 Aligned_cols=44 Identities=30% Similarity=0.518 Sum_probs=39.5
Q ss_pred CCCCCCcHHHHHHHhhcCCccccccccccchhhhhhhCChHHHH
Q 016018 2 AGFSDLPEELVFKILVLLPVDSLLCSKCVQKSWYSLITNSRFVV 45 (396)
Q Consensus 2 ~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~ 45 (396)
..+..||+|++.+||.+||+++++++++|||+|+.++.++.|.+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 35789999999999999999999999999999999999998754
No 3
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.11 E-value=3.9e-08 Score=91.04 Aligned_cols=199 Identities=12% Similarity=-0.014 Sum_probs=128.7
Q ss_pred cEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeC-CCCcccceEEEEEcCCCccccccccccc
Q 016018 122 RVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISD-GSGLCHLKVEVYTLSADCWRELVANIDF 200 (396)
Q Consensus 122 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~-~~~~~~~~~evys~~t~~Wr~~~~~~~~ 200 (396)
.++++||.|++|..+|+.+.+. ....+ ... +=+++.++.... ........+++|+..+++|+.++.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r---~~~~~--~~~----~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---- 134 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPR---CLFGL--GEA----LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---- 134 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCE---ESCEE--EEE----TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC----
T ss_pred ceEEecCCCCeEEECCCCCcch---hceeE--EEE----CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC----
Confidence 4889999999999998876542 11111 111 126777765432 112234689999999999999874
Q ss_pred cccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec-CCCCccccccccceEEEecCee
Q 016018 201 LGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP-VPNILNEIDQEFSKLTVLNESL 279 (396)
Q Consensus 201 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~l~~~~g~L 279 (396)
. +.+ ......+.++|.+|.+..... +......+..||+.+++|+.++ +|.. ......+..+|+|
T Consensus 135 ~--p~~--r~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~~yd~~~~~W~~~~~~p~~-----r~~~~~~~~~~~i 199 (315)
T 4asc_A 135 L--PYV--VYGHTVLSHMDLVYVIGGKGS------DRKCLNKMCVYDPKKFEWKELAPMQTA-----RSLFGATVHDGRI 199 (315)
T ss_dssp C--SSC--CBSCEEEEETTEEEEECCBCT------TSCBCCCEEEEETTTTEEEECCCCSSC-----CBSCEEEEETTEE
T ss_pred C--CCc--ccceeEEEECCEEEEEeCCCC------CCcccceEEEEeCCCCeEEECCCCCCc-----hhceEEEEECCEE
Confidence 2 122 122347889999998875421 1222457999999999999874 4442 1224567889999
Q ss_pred EEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecC---------------CeEEEEE
Q 016018 280 AFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYY---------------REACSYN 344 (396)
Q Consensus 280 ~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~---------------~~l~~yd 344 (396)
.++........ .-++|+++-. ..+|++.-.++.. .....+++ -++.|++.... ..+..||
T Consensus 200 yv~GG~~~~~~-~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd 274 (315)
T 4asc_A 200 IVAAGVTDTGL-TSSAEVYSIT--DNKWAPFEAFPQE-RSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYN 274 (315)
T ss_dssp EEEEEECSSSE-EEEEEEEETT--TTEEEEECCCSSC-CBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEEeccCCCCc-cceEEEEECC--CCeEEECCCCCCc-ccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEec
Confidence 99988754322 2578888753 4689998654332 22222333 35677766321 2488999
Q ss_pred CCCCcEEEE
Q 016018 345 LGTKEIKKL 353 (396)
Q Consensus 345 ~~t~~~~~~ 353 (396)
+++++|+.+
T Consensus 275 ~~~~~W~~~ 283 (315)
T 4asc_A 275 EEEKKWEGV 283 (315)
T ss_dssp TTTTEEEEE
T ss_pred CCCChhhhh
Confidence 999999988
No 4
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.05 E-value=1.1e-07 Score=88.16 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=127.8
Q ss_pred EEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccccccccccccc
Q 016018 123 VVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDFLG 202 (396)
Q Consensus 123 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~~~ 202 (396)
++++||.|++|..+|+.+.+. ....+ ... +=+++.++............+++|+..+++|+.++. .+
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r---~~~~~--~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~----~p 146 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSAR---CLFGL--GEV----DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN----LP 146 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCB---CSCEE--EEE----TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC----CS
T ss_pred EEEEeCCCCcEEECCCCCccc---cccce--EEE----CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC----CC
Confidence 889999999999998776542 11111 111 125777765542222234689999999999999874 21
Q ss_pred cccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec-CCCCccccccccceEEEecCeeEE
Q 016018 203 AGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP-VPNILNEIDQEFSKLTVLNESLAF 281 (396)
Q Consensus 203 ~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~l~~~~g~L~~ 281 (396)
.+ ......+.++|.+|.+..... +......+..||+.+++|+.++ +|.. . .....+..+|+|.+
T Consensus 147 --~~--r~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~~yd~~~~~W~~~~~~p~~-r----~~~~~~~~~~~iyv 211 (318)
T 2woz_A 147 --IK--VYGHNVISHNGMIYCLGGKTD------DKKCTNRVFIYNPKKGDWKDLAPMKTP-R----SMFGVAIHKGKIVI 211 (318)
T ss_dssp --SC--EESCEEEEETTEEEEECCEES------SSCBCCCEEEEETTTTEEEEECCCSSC-C----BSCEEEEETTEEEE
T ss_pred --Cc--ccccEEEEECCEEEEEcCCCC------CCCccceEEEEcCCCCEEEECCCCCCC-c----ccceEEEECCEEEE
Confidence 22 112347789999998865321 1122346999999999999884 4431 1 12356778999999
Q ss_pred EEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec---------------CCeEEEEECC
Q 016018 282 VLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY---------------YREACSYNLG 346 (396)
Q Consensus 282 ~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~---------------~~~l~~yd~~ 346 (396)
+....... ..-++|+++-. ..+|++...++.. .....++ ..++.|++... ...+..||++
T Consensus 212 ~GG~~~~~-~~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 212 AGGVTEDG-LSASVEAFDLK--TNKWEVMTEFPQE-RSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEEETTE-EEEEEEEEETT--TCCEEECCCCSSC-CBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EcCcCCCC-ccceEEEEECC--CCeEEECCCCCCc-ccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 98865432 22578888742 4689997655432 2222233 34567777632 1358999999
Q ss_pred CCcEEEE
Q 016018 347 TKEIKKL 353 (396)
Q Consensus 347 t~~~~~~ 353 (396)
+++|+++
T Consensus 287 ~~~W~~~ 293 (318)
T 2woz_A 287 KKEWAGM 293 (318)
T ss_dssp TTEEEEE
T ss_pred CCEehhh
Confidence 9999998
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.99 E-value=1.4e-07 Score=86.43 Aligned_cols=212 Identities=11% Similarity=0.023 Sum_probs=133.4
Q ss_pred EeeeCceEEEeEc------CCcEEEEcchhhh---hccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcc
Q 016018 107 VGHCHGIVCFALL------SGRVVLANPAIRE---FRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLC 177 (396)
Q Consensus 107 ~~sc~GLlc~~~~------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~ 177 (396)
.+..+|.|.+..+ .+.++++||.|++ |..+|+.+.+. ....+. .++ =|++.++..... ..
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r---~~~~~~-~~~-----~~lyv~GG~~~~--~~ 126 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR---GLAGAT-TLG-----DMIYVSGGFDGS--RR 126 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC---BSCEEE-EET-----TEEEEECCBCSS--CB
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc---cceeEE-EEC-----CEEEEEcccCCC--cc
Confidence 3345666644332 1479999999999 99998776542 111111 111 256766643321 12
Q ss_pred cceEEEEEcCCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec
Q 016018 178 HLKVEVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP 257 (396)
Q Consensus 178 ~~~~evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~ 257 (396)
...+++|+..+++|+.++. .+ .+ ......+.++|.+|.+..... ......+..||+.+++|+.++
T Consensus 127 ~~~~~~~d~~~~~W~~~~~----~p--~~--r~~~~~~~~~~~iyv~GG~~~-------~~~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 127 HTSMERYDPNIDQWSMLGD----MQ--TA--REGAGLVVASGVIYCLGGYDG-------LNILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp CCEEEEEETTTTEEEEEEE----CS--SC--CBSCEEEEETTEEEEECCBCS-------SCBCCCEEEEETTTTEEEEEC
T ss_pred cceEEEEcCCCCeEEECCC----CC--CC--cccceEEEECCEEEEECCCCC-------CcccceEEEEeCCCCcEEeCC
Confidence 3689999999999999874 11 11 122347788999998865431 122457999999999999884
Q ss_pred -CCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec
Q 016018 258 -VPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY 336 (396)
Q Consensus 258 -lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~ 336 (396)
+|.. .....++..+++|+++........ .-++|+++-. ..+|++.-.++... .....++ -++.|++...
T Consensus 192 ~~p~~-----r~~~~~~~~~~~i~v~GG~~~~~~-~~~v~~yd~~--~~~W~~~~~~p~~r-~~~~~~~-~~~~i~v~GG 261 (301)
T 2vpj_A 192 PMATK-----RSGAGVALLNDHIYVVGGFDGTAH-LSSVEAYNIR--TDSWTTVTSMTTPR-CYVGATV-LRGRLYAIAG 261 (301)
T ss_dssp CCSSC-----CBSCEEEEETTEEEEECCBCSSSB-CCCEEEEETT--TTEEEEECCCSSCC-BSCEEEE-ETTEEEEECC
T ss_pred CCCcc-----cccceEEEECCEEEEEeCCCCCcc-cceEEEEeCC--CCcEEECCCCCCcc-cceeEEE-ECCEEEEEcC
Confidence 4441 122456778999999887643221 1457777642 46799876544322 2222333 4677777743
Q ss_pred C------CeEEEEECCCCcEEEEe
Q 016018 337 Y------REACSYNLGTKEIKKLP 354 (396)
Q Consensus 337 ~------~~l~~yd~~t~~~~~~~ 354 (396)
. ..+..||+++++|+.+.
T Consensus 262 ~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp BCSSSBEEEEEEEETTTTEEEEEE
T ss_pred cCCCcccccEEEEcCCCCeEEEcC
Confidence 1 36899999999999875
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.98 E-value=1.2e-07 Score=87.45 Aligned_cols=199 Identities=11% Similarity=0.047 Sum_probs=127.7
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccccccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDF 200 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~ 200 (396)
+.++++||.|++|..+|+.+.+. .....+. ++ =|++.++..... .....+++|+..+++|+.++.
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~--~~-----~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~---- 154 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPR--NRIGVGV--ID-----GHIYAVGGSHGC--IHHNSVERYEPERDEWHLVAP---- 154 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC--BTCEEEE--ET-----TEEEEECCEETT--EECCCEEEEETTTTEEEECCC----
T ss_pred ceEEEECCCCCeEeECCCCCcCc--cccEEEE--EC-----CEEEEEcCCCCC--cccccEEEECCCCCeEeECCC----
Confidence 47999999999999998776542 1111111 11 257776654322 123679999999999999874
Q ss_pred cccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec-CCCCccccccccceEEEecCee
Q 016018 201 LGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP-VPNILNEIDQEFSKLTVLNESL 279 (396)
Q Consensus 201 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~l~~~~g~L 279 (396)
.+ .+ ......+.++|.+|-+..... ......+..||+.+++|..++ +|.. ......+..+++|
T Consensus 155 ~p--~~--r~~~~~~~~~~~iyv~GG~~~-------~~~~~~~~~yd~~~~~W~~~~~~p~~-----r~~~~~~~~~~~i 218 (308)
T 1zgk_A 155 ML--TR--RIGVGVAVLNRLLYAVGGFDG-------TNRLNSAECYYPERNEWRMITAMNTI-----RSGAGVCVLHNCI 218 (308)
T ss_dssp CS--SC--CBSCEEEEETTEEEEECCBCS-------SCBCCCEEEEETTTTEEEECCCCSSC-----CBSCEEEEETTEE
T ss_pred CC--cc--ccceEEEEECCEEEEEeCCCC-------CCcCceEEEEeCCCCeEeeCCCCCCc-----cccceEEEECCEE
Confidence 11 21 122347888999998865431 112457999999999999874 3431 1223567789999
Q ss_pred EEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec------CCeEEEEECCCCcEEEE
Q 016018 280 AFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY------YREACSYNLGTKEIKKL 353 (396)
Q Consensus 280 ~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~~~~ 353 (396)
.++....... ..-++|+++-. ..+|++...++... ....+++ .++.|++... ...+..||+++++|+.+
T Consensus 219 yv~GG~~~~~-~~~~v~~yd~~--~~~W~~~~~~p~~r-~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 219 YAAGGYDGQD-QLNSVERYDVE--TETWTFVAPMKHRR-SALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp EEECCBCSSS-BCCCEEEEETT--TTEEEECCCCSSCC-BSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCC-ccceEEEEeCC--CCcEEECCCCCCCc-cceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 9988764322 11567777743 46899876443322 2222333 4677877742 24699999999999988
Q ss_pred ee
Q 016018 354 PV 355 (396)
Q Consensus 354 ~~ 355 (396)
.-
T Consensus 294 ~~ 295 (308)
T 1zgk_A 294 TR 295 (308)
T ss_dssp EE
T ss_pred CC
Confidence 53
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.93 E-value=2.7e-07 Score=84.63 Aligned_cols=213 Identities=12% Similarity=0.049 Sum_probs=133.5
Q ss_pred eeeCceEEEeEc------CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceE
Q 016018 108 GHCHGIVCFALL------SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKV 181 (396)
Q Consensus 108 ~sc~GLlc~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ 181 (396)
+..+|.|.+..+ .+.+.++||.|++|..+|+.+.+. ....+. .++ =+++.++..... .....+
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~-~~~-----~~iyv~GG~~~~--~~~~~~ 126 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR---STLGAA-VLN-----GLLYAVGGFDGS--TGLSSV 126 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC---BSCEEE-EET-----TEEEEEEEECSS--CEEEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc---cceEEE-EEC-----CEEEEEcCCCCC--ccCceE
Confidence 344676654432 137999999999999999776542 111211 111 256666654322 123679
Q ss_pred EEEEcCCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec-CCC
Q 016018 182 EVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP-VPN 260 (396)
Q Consensus 182 evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~ 260 (396)
++|+..+++|+.++. .+ .+ ......+.++|.+|-+...... .......+..||+.+++|+.++ +|.
T Consensus 127 ~~~d~~~~~W~~~~~----~p--~~--r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~~yd~~~~~W~~~~~~p~ 193 (302)
T 2xn4_A 127 EAYNIKSNEWFHVAP----MN--TR--RSSVGVGVVGGLLYAVGGYDVA-----SRQCLSTVECYNATTNEWTYIAEMST 193 (302)
T ss_dssp EEEETTTTEEEEECC----CS--SC--CBSCEEEEETTEEEEECCEETT-----TTEECCCEEEEETTTTEEEEECCCSS
T ss_pred EEEeCCCCeEeecCC----CC--Cc--ccCceEEEECCEEEEEeCCCCC-----CCccccEEEEEeCCCCcEEECCCCcc
Confidence 999999999999874 11 21 1223477889999988644310 0011346899999999999883 443
Q ss_pred CccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec----
Q 016018 261 ILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY---- 336 (396)
Q Consensus 261 ~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~---- 336 (396)
. . ....++..+|+|+++........ .-++|+++-. ...|++.-.++... ....++ ..++.|++...
T Consensus 194 ~---r--~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~yd~~--~~~W~~~~~~~~~r-~~~~~~-~~~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 194 R---R--SGAGVGVLNNLLYAVGGHDGPLV-RKSVEVYDPT--TNAWRQVADMNMCR-RNAGVC-AVNGLLYVVGGDDGS 263 (302)
T ss_dssp C---C--BSCEEEEETTEEEEECCBSSSSB-CCCEEEEETT--TTEEEEECCCSSCC-BSCEEE-EETTEEEEECCBCSS
T ss_pred c---c--ccccEEEECCEEEEECCCCCCcc-cceEEEEeCC--CCCEeeCCCCCCcc-ccCeEE-EECCEEEEECCcCCC
Confidence 1 1 22456788999999887643221 1367777752 46899876544322 222233 34677877743
Q ss_pred --CCeEEEEECCCCcEEEEe
Q 016018 337 --YREACSYNLGTKEIKKLP 354 (396)
Q Consensus 337 --~~~l~~yd~~t~~~~~~~ 354 (396)
...+..||+++++|+.+.
T Consensus 264 ~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 264 CNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SBCCCEEEEETTTTEEEECS
T ss_pred cccccEEEEcCCCCeEEECC
Confidence 135999999999999875
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.92 E-value=2.2e-07 Score=85.39 Aligned_cols=217 Identities=10% Similarity=-0.077 Sum_probs=134.3
Q ss_pred EeeeCceEEEeEc-----CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceE
Q 016018 107 VGHCHGIVCFALL-----SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKV 181 (396)
Q Consensus 107 ~~sc~GLlc~~~~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ 181 (396)
.+..+|.|.+..+ .+.+.++||.|++|..+|+.+.+. ....+. .+ +=|++.++..... ......+
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~-~~-----~~~iyv~GG~~~~-~~~~~~~ 120 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR---DSLAAC-AA-----EGKIYTSGGSEVG-NSALYLF 120 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC---BSCEEE-EE-----TTEEEEECCBBTT-BSCCCCE
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc---cceeEE-EE-----CCEEEEECCCCCC-CcEeeeE
Confidence 3345676644432 248999999999999998776542 111111 11 2256666654311 1223689
Q ss_pred EEEEcCCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec-CCC
Q 016018 182 EVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP-VPN 260 (396)
Q Consensus 182 evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~ 260 (396)
++|+..+++|+.++. . +.+ ......+.++|.+|.+....... ........+..||+.+++|+.++ +|.
T Consensus 121 ~~~d~~~~~W~~~~~----~--p~~--r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~~~~~yd~~~~~W~~~~~~p~ 189 (306)
T 3ii7_A 121 ECYDTRTESWHTKPS----M--LTQ--RCSHGMVEANGLIYVCGGSLGNN---VSGRVLNSCEVYDPATETWTELCPMIE 189 (306)
T ss_dssp EEEETTTTEEEEECC----C--SSC--CBSCEEEEETTEEEEECCEESCT---TTCEECCCEEEEETTTTEEEEECCCSS
T ss_pred EEEeCCCCceEeCCC----C--cCC--cceeEEEEECCEEEEECCCCCCC---CcccccceEEEeCCCCCeEEECCCccc
Confidence 999999999999874 1 122 12234788899999886543100 00001356899999999999884 443
Q ss_pred CccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec----
Q 016018 261 ILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY---- 336 (396)
Q Consensus 261 ~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~---- 336 (396)
. .....++..+|+|.++....... ..-++|+++-. ..+|++.-.++.. ......++ -++.|++...
T Consensus 190 ~-----r~~~~~~~~~~~i~v~GG~~~~~-~~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~~~-~~~~i~v~GG~~~~ 259 (306)
T 3ii7_A 190 A-----RKNHGLVFVKDKIFAVGGQNGLG-GLDNVEYYDIK--LNEWKMVSPMPWK-GVTVKCAA-VGSIVYVLAGFQGV 259 (306)
T ss_dssp C-----CBSCEEEEETTEEEEECCEETTE-EBCCEEEEETT--TTEEEECCCCSCC-BSCCEEEE-ETTEEEEEECBCSS
T ss_pred h-----hhcceEEEECCEEEEEeCCCCCC-CCceEEEeeCC--CCcEEECCCCCCC-ccceeEEE-ECCEEEEEeCcCCC
Confidence 1 12245677899999987764321 11457777743 4679987544332 22222333 3677777743
Q ss_pred --CCeEEEEECCCCcEEEEe
Q 016018 337 --YREACSYNLGTKEIKKLP 354 (396)
Q Consensus 337 --~~~l~~yd~~t~~~~~~~ 354 (396)
...+..||+++++|+.+.
T Consensus 260 ~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 260 GRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp SBCCEEEEEETTTTEEEEEE
T ss_pred eeeeeEEEEcCCCCeEEeCC
Confidence 246999999999999875
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.87 E-value=1e-07 Score=89.66 Aligned_cols=229 Identities=12% Similarity=0.022 Sum_probs=130.9
Q ss_pred EeeeCceEEEeEc--CCcEEEEcch--hhhhccccccc-cCCCCcceeEEEEEEecCCCCeEEEEEEEE-e--CCCCccc
Q 016018 107 VGHCHGIVCFALL--SGRVVLANPA--IREFRHLREHC-YHSFSYWMGCVGFGYDVKSNDYKVVRILCI-S--DGSGLCH 178 (396)
Q Consensus 107 ~~sc~GLlc~~~~--~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~-~--~~~~~~~ 178 (396)
.+..+|.|.+..+ .+.++++||. +++|..+|+.+ .++ ....+. .++ =+|+.++.. . .......
T Consensus 15 ~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R---~~~~~~-~~~-----~~lyv~GG~~~~~~~~~~~~ 85 (357)
T 2uvk_A 15 GAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPR---DQATSA-FID-----GNLYVFGGIGKNSEGLTQVF 85 (357)
T ss_dssp EEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCC---BSCEEE-EET-----TEEEEECCEEECTTSCEEEC
T ss_pred EEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcC---ccceEE-EEC-----CEEEEEcCCCCCCCccceee
Confidence 3344777755443 3489999998 49999998766 332 111111 122 257777654 2 1111223
Q ss_pred ceEEEEEcCCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccc------------------------
Q 016018 179 LKVEVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINY------------------------ 234 (396)
Q Consensus 179 ~~~evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~------------------------ 234 (396)
..+++|+..+++|+.+... + +........+.++|.+|.+........+.
T Consensus 86 ~~v~~yd~~~~~W~~~~~~------~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSH------A-PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp CCEEEEETTTTEEEECSCC------C-SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred ccEEEEeCCCCcEEECCCC------C-CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 6799999999999998841 1 11122223677999999887543100000
Q ss_pred ---cCCCCccEEEEEeCCCceeeee-cCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEE
Q 016018 235 ---NNLVNGDFIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKL 310 (396)
Q Consensus 235 ---~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~ 310 (396)
........+..||+.+++|+.+ ++|.. . . ....++..+++|+++..........-++|.++-......|++.
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-~-~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWY-G-T--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSC-C-C--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCC-C-c--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 0001125799999999999987 45541 1 1 1245678899999987653222111467777621125679987
Q ss_pred EEecCCCCcceeEEEEeCCcEEEEecC-----------------------CeEEEEECCCCcEEEEee
Q 016018 311 FTTEPFCEIKRPLSFCERGELIMEDYY-----------------------REACSYNLGTKEIKKLPV 355 (396)
Q Consensus 311 ~~i~~~~~~~~p~~~~~~g~il~~~~~-----------------------~~l~~yd~~t~~~~~~~~ 355 (396)
-.++.........++..++.|++.... ..+..||+++++|+.+.-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 235 APVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp CCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred CCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 655332222122234456777777431 247899999999998863
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.85 E-value=4.8e-07 Score=83.17 Aligned_cols=199 Identities=13% Similarity=0.057 Sum_probs=126.6
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccccccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDF 200 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~ 200 (396)
+.+.++||.|++|..+++.+.+. ....+. .++ + +++.++... ......+++|+..+++|+.+..
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~-~~~----~-~lyv~GG~~---~~~~~~~~~~d~~~~~W~~~~~---- 87 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKR---RDAACV-FWD----N-VVYILGGSQ---LFPIKRMDCYNVVKDSWYSKLG---- 87 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCC---BSCEEE-EET----T-EEEEECCBS---SSBCCEEEEEETTTTEEEEEEC----
T ss_pred ceEEEecCCCCCEecCCCCCccc---ceeEEE-EEC----C-EEEEEeCCC---CCCcceEEEEeCCCCeEEECCC----
Confidence 48999999999999998776542 112211 111 2 466665433 1234789999999999999874
Q ss_pred cccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee-cCCCCccccccccceEEEecCee
Q 016018 201 LGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTVLNESL 279 (396)
Q Consensus 201 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~~~g~L 279 (396)
. +.+ ......+.++|.+|.+..... .......+..||+.+++|+.+ ++|.. . .....+..+|+|
T Consensus 88 ~--p~~--r~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~~~d~~~~~W~~~~~~p~~---r--~~~~~~~~~~~i 152 (306)
T 3ii7_A 88 P--PTP--RDSLAACAAEGKIYTSGGSEV------GNSALYLFECYDTRTESWHTKPSMLTQ---R--CSHGMVEANGLI 152 (306)
T ss_dssp C--SSC--CBSCEEEEETTEEEEECCBBT------TBSCCCCEEEEETTTTEEEEECCCSSC---C--BSCEEEEETTEE
T ss_pred C--Ccc--ccceeEEEECCEEEEECCCCC------CCcEeeeEEEEeCCCCceEeCCCCcCC---c--ceeEEEEECCEE
Confidence 1 121 122347788999998765420 122235799999999999988 34442 1 223567789999
Q ss_pred EEEEeecCCCc---cEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec------CCeEEEEECCCCcE
Q 016018 280 AFVLRDKYRKS---YEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY------YREACSYNLGTKEI 350 (396)
Q Consensus 280 ~~~~~~~~~~~---~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~ 350 (396)
+++........ ..-++|+++-. ..+|++.-.++.. .....+.+ .++.|++... ...+..||+++++|
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPA--TETWTELCPMIEA-RKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETT--TTEEEEECCCSSC-CBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred EEECCCCCCCCcccccceEEEeCCC--CCeEEECCCccch-hhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 99887643210 01467777743 4689987654332 22222333 3677777642 24699999999999
Q ss_pred EEEe
Q 016018 351 KKLP 354 (396)
Q Consensus 351 ~~~~ 354 (396)
+.+.
T Consensus 229 ~~~~ 232 (306)
T 3ii7_A 229 KMVS 232 (306)
T ss_dssp EECC
T ss_pred EECC
Confidence 9875
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.79 E-value=1.3e-06 Score=80.00 Aligned_cols=198 Identities=11% Similarity=0.030 Sum_probs=126.2
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCc---ccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADC---WRELVAN 197 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~---Wr~~~~~ 197 (396)
+.++++||.|++|..+|..+.+. ....+. ..+ =+++.++.... ......+++|+..++. |+.+..
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~-~~~-----~~l~v~GG~~~--~~~~~~~~~~d~~~~~~~~W~~~~~- 98 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKR---RYVASV-SLH-----DRIYVIGGYDG--RSRLSSVECLDYTADEDGVWYSVAP- 98 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC---BSCEEE-EET-----TEEEEECCBCS--SCBCCCEEEEETTCCTTCCCEEECC-
T ss_pred eEEEEEcCCCCeEEeCCCCChhh---ccccEE-EEC-----CEEEEEcCCCC--CccCceEEEEECCCCCCCeeEECCC-
Confidence 48999999999999998765432 111111 111 25666654332 1123678999999999 999874
Q ss_pred ccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee-cCCCCccccccccceEEEec
Q 016018 198 IDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTVLN 276 (396)
Q Consensus 198 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~~~ 276 (396)
.+ .+ ......+.++|.+|.+..... ......+..||+.+.+|+.+ ++|.. . .....+..+
T Consensus 99 ---~p--~~--r~~~~~~~~~~~lyv~GG~~~-------~~~~~~~~~~d~~~~~W~~~~~~p~~-r----~~~~~~~~~ 159 (301)
T 2vpj_A 99 ---MN--VR--RGLAGATTLGDMIYVSGGFDG-------SRRHTSMERYDPNIDQWSMLGDMQTA-R----EGAGLVVAS 159 (301)
T ss_dssp ---CS--SC--CBSCEEEEETTEEEEECCBCS-------SCBCCEEEEEETTTTEEEEEEECSSC-C----BSCEEEEET
T ss_pred ---CC--CC--ccceeEEEECCEEEEEcccCC-------CcccceEEEEcCCCCeEEECCCCCCC-c----ccceEEEEC
Confidence 21 22 122347888999998865431 12235799999999999987 34442 1 223567789
Q ss_pred CeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec------CCeEEEEECCCCcE
Q 016018 277 ESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY------YREACSYNLGTKEI 350 (396)
Q Consensus 277 g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~ 350 (396)
|+|+++....... ..-++|+++-. ...|++.-.++.. ...... +..++.|++... ...+..||+++++|
T Consensus 160 ~~iyv~GG~~~~~-~~~~~~~~d~~--~~~W~~~~~~p~~-r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 160 GVIYCLGGYDGLN-ILNSVEKYDPH--TGHWTNVTPMATK-RSGAGV-ALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp TEEEEECCBCSSC-BCCCEEEEETT--TTEEEEECCCSSC-CBSCEE-EEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CEEEEECCCCCCc-ccceEEEEeCC--CCcEEeCCCCCcc-cccceE-EEECCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 9999987754322 11457777743 4689988544322 222223 334677777743 24699999999999
Q ss_pred EEEe
Q 016018 351 KKLP 354 (396)
Q Consensus 351 ~~~~ 354 (396)
+.+.
T Consensus 235 ~~~~ 238 (301)
T 2vpj_A 235 TTVT 238 (301)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9875
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.73 E-value=1.3e-06 Score=80.66 Aligned_cols=205 Identities=12% Similarity=0.028 Sum_probs=123.0
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeC---C-CCcccceEEEEEcCCCccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISD---G-SGLCHLKVEVYTLSADCWRELVA 196 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~---~-~~~~~~~~evys~~t~~Wr~~~~ 196 (396)
+.+.++||.|++|.. ++.+.|. .... .+... . +=+|+.++.... . .......+.+|+..+++|+.++.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~-~r~~--~~~~~--~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQV-PKNH--VSLVT--K--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCS-CSSE--EEEEC--T--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred CceEEECCCCCeEec-CCCCCCC-Cccc--eEEEE--E--CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 479999999999986 4332221 1111 11111 1 224555655321 1 11112458999999999998874
Q ss_pred cccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee-cCCCCccccccccceEEEe
Q 016018 197 NIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTVL 275 (396)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~~ 275 (396)
. +.+ ......+.++|.+|.+...... .+......+..||+.+.+|+.+ ++|.. . .....+..
T Consensus 85 ----~--p~~--r~~~~~~~~~~~lyv~GG~~~~----~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r----~~~~~~~~ 147 (315)
T 4asc_A 85 ----L--PSP--RCLFGLGEALNSIYVVGGREIK----DGERCLDSVMCYDRLSFKWGESDPLPYV-V----YGHTVLSH 147 (315)
T ss_dssp ----B--SSC--EESCEEEEETTEEEEECCEESS----TTCCBCCCEEEEETTTTEEEECCCCSSC-C----BSCEEEEE
T ss_pred ----C--Ccc--hhceeEEEECCEEEEEeCCcCC----CCCcccceEEEECCCCCcEeECCCCCCc-c----cceeEEEE
Confidence 1 121 1123478889999988653200 0122345789999999999987 44542 1 22356779
Q ss_pred cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec------CCeEEEEECCCCc
Q 016018 276 NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY------YREACSYNLGTKE 349 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~ 349 (396)
+|+|+++..........-++|+++-. ..+|++.-.++.. ...... +.-++.|++... ...+..||+++++
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPK--KFEWKELAPMQTA-RSLFGA-TVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETT--TTEEEECCCCSSC-CBSCEE-EEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCC--CCeEEECCCCCCc-hhceEE-EEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 99999988763222212467888753 4689987654332 222223 334667777642 1269999999999
Q ss_pred EEEEe
Q 016018 350 IKKLP 354 (396)
Q Consensus 350 ~~~~~ 354 (396)
|+.+.
T Consensus 224 W~~~~ 228 (315)
T 4asc_A 224 WAPFE 228 (315)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 99875
No 13
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.72 E-value=1.7e-06 Score=79.24 Aligned_cols=199 Identities=9% Similarity=0.028 Sum_probs=126.2
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccccccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDF 200 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~ 200 (396)
+.+.++||.+++|..+++.+.+. ....+. .+ +-+|+.++..... .....+++|+..+++|+.++.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~-~~-----~~~lyv~GG~~~~--~~~~~~~~~d~~~~~W~~~~~---- 94 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRR---CRAGMV-YM-----AGLVFAVGGFNGS--LRVRTVDSYDPVKDQWTSVAN---- 94 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCC---BSCEEE-EE-----TTEEEEESCBCSS--SBCCCEEEEETTTTEEEEECC----
T ss_pred CcEEEEcCcCCcEeEcccCCccc---ccceEE-EE-----CCEEEEEeCcCCC--ccccceEEECCCCCceeeCCC----
Confidence 37899999999999998765542 111111 11 2246666543221 123678999999999999874
Q ss_pred cccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec-CCCCccccccccceEEEecCee
Q 016018 201 LGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP-VPNILNEIDQEFSKLTVLNESL 279 (396)
Q Consensus 201 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~l~~~~g~L 279 (396)
.+ .+ ......+.++|.+|-+..... ......+..||+.+++|+.++ +|.. . .....+..+|+|
T Consensus 95 ~p--~~--r~~~~~~~~~~~iyv~GG~~~-------~~~~~~~~~~d~~~~~W~~~~~~p~~---r--~~~~~~~~~~~i 158 (302)
T 2xn4_A 95 MR--DR--RSTLGAAVLNGLLYAVGGFDG-------STGLSSVEAYNIKSNEWFHVAPMNTR---R--SSVGVGVVGGLL 158 (302)
T ss_dssp CS--SC--CBSCEEEEETTEEEEEEEECS-------SCEEEEEEEEETTTTEEEEECCCSSC---C--BSCEEEEETTEE
T ss_pred CC--cc--ccceEEEEECCEEEEEcCCCC-------CccCceEEEEeCCCCeEeecCCCCCc---c--cCceEEEECCEE
Confidence 11 21 122347788999998865431 122346899999999999884 4431 1 223567789999
Q ss_pred EEEEeecCCC-ccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec------CCeEEEEECCCCcEEE
Q 016018 280 AFVLRDKYRK-SYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY------YREACSYNLGTKEIKK 352 (396)
Q Consensus 280 ~~~~~~~~~~-~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~~~ 352 (396)
+++....... ...-++|.++-. ..+|++.-.++.. .....++ ..++.|++... ...+..||+++++|+.
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNAT--TNEWTYIAEMSTR-RSGAGVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETT--TTEEEEECCCSSC-CBSCEEE-EETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred EEEeCCCCCCCccccEEEEEeCC--CCcEEECCCCccc-cccccEE-EECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 9988764322 111357777742 4689998554332 2222233 34677777742 2369999999999998
Q ss_pred Ee
Q 016018 353 LP 354 (396)
Q Consensus 353 ~~ 354 (396)
+.
T Consensus 235 ~~ 236 (302)
T 2xn4_A 235 VA 236 (302)
T ss_dssp EC
T ss_pred CC
Confidence 76
No 14
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.72 E-value=2.5e-05 Score=75.29 Aligned_cols=48 Identities=23% Similarity=0.303 Sum_probs=43.9
Q ss_pred CCCCCcHHHHHHHhhcCCccccccccccchhhhhhhCChHHHHHHHhc
Q 016018 3 GFSDLPEELVFKILVLLPVDSLLCSKCVQKSWYSLITNSRFVVKHLRN 50 (396)
Q Consensus 3 ~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~ 50 (396)
.+..||+|++..||+.|++++|+++.+|||+|+.++.++.+.+....+
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~ 65 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKE 65 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTT
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheee
Confidence 467899999999999999999999999999999999999998876543
No 15
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.70 E-value=8.2e-07 Score=81.77 Aligned_cols=200 Identities=8% Similarity=0.017 Sum_probs=125.1
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeC--CCCcccceEEEEEcCCCccccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISD--GSGLCHLKVEVYTLSADCWRELVANI 198 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~--~~~~~~~~~evys~~t~~Wr~~~~~~ 198 (396)
+.+.++||.|++|..+++.+.+. ....+. .+ +=+++.++.... ........+++|+..+++|+.++.
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~-~~-----~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-- 107 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPR---SGLAGC-VV-----GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP-- 107 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC---BSCEEE-EE-----TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC--
T ss_pred ceEEEEcCCCCeEeECCCCCccc---ccceEE-EE-----CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC--
Confidence 47999999999999998766542 111111 11 124666654320 111123578999999999999874
Q ss_pred cccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee-cCCCCccccccccceEEEecC
Q 016018 199 DFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTVLNE 277 (396)
Q Consensus 199 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~~~g 277 (396)
.+ .+ ......+.++|.+|.+..... ......+..||+.+++|..+ ++|.. . .....+..++
T Consensus 108 --~p--~~--r~~~~~~~~~~~iyv~GG~~~-------~~~~~~~~~yd~~~~~W~~~~~~p~~--r---~~~~~~~~~~ 169 (308)
T 1zgk_A 108 --MS--VP--RNRIGVGVIDGHIYAVGGSHG-------CIHHNSVERYEPERDEWHLVAPMLTR--R---IGVGVAVLNR 169 (308)
T ss_dssp --CS--SC--CBTCEEEEETTEEEEECCEET-------TEECCCEEEEETTTTEEEECCCCSSC--C---BSCEEEEETT
T ss_pred --CC--cC--ccccEEEEECCEEEEEcCCCC-------CcccccEEEECCCCCeEeECCCCCcc--c---cceEEEEECC
Confidence 11 21 122347788999998864331 11134689999999999988 44542 1 1234667799
Q ss_pred eeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec------CCeEEEEECCCCcEE
Q 016018 278 SLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY------YREACSYNLGTKEIK 351 (396)
Q Consensus 278 ~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~~ 351 (396)
+|+++........ .-++|+++-. ..+|++.-.++.. ......++ -++.|++... ...+..||+++++|+
T Consensus 170 ~iyv~GG~~~~~~-~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 170 LLYAVGGFDGTNR-LNSAECYYPE--RNEWRMITAMNTI-RSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp EEEEECCBCSSCB-CCCEEEEETT--TTEEEECCCCSSC-CBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred EEEEEeCCCCCCc-CceEEEEeCC--CCeEeeCCCCCCc-cccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 9999887643221 1457777742 4689987544332 22222333 3677777742 246999999999999
Q ss_pred EEe
Q 016018 352 KLP 354 (396)
Q Consensus 352 ~~~ 354 (396)
.+.
T Consensus 245 ~~~ 247 (308)
T 1zgk_A 245 FVA 247 (308)
T ss_dssp ECC
T ss_pred ECC
Confidence 875
No 16
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.67 E-value=6e-05 Score=72.84 Aligned_cols=44 Identities=25% Similarity=0.461 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHhhcCCccccccccccchhhhhhhCC-hHHHHHH
Q 016018 4 FSDLPEELVFKILVLLPVDSLLCSKCVQKSWYSLITN-SRFVVKH 47 (396)
Q Consensus 4 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~-~~F~~~~ 47 (396)
+..||+||+.+||+.||+++|+++..|||+|+.++.+ +...+..
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~ 59 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKL 59 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3469999999999999999999999999999999998 6655544
No 17
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.55 E-value=4.9e-06 Score=76.84 Aligned_cols=202 Identities=10% Similarity=0.056 Sum_probs=120.7
Q ss_pred cEEEEcchhhhhccccccc-cCCCCcceeEEEEEEecCCCCeEEEEEEEEe-C--CC-CcccceEEEEEcCCCccccccc
Q 016018 122 RVVLANPAIREFRHLREHC-YHSFSYWMGCVGFGYDVKSNDYKVVRILCIS-D--GS-GLCHLKVEVYTLSADCWRELVA 196 (396)
Q Consensus 122 ~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~-~--~~-~~~~~~~evys~~t~~Wr~~~~ 196 (396)
...++||.|++|...|.+. .+ .... +... .+=+|+.++... + .. ......+++|+..+++|+.++.
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~---r~~~--~~~~----~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIP---RNHS--SIVT----QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSC---SSEE--EEEC----SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred ceEEECCCCCceecccCCccCC---ccce--EEEE----ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 5789999999999854321 12 1111 1111 122455555421 1 10 0112348999999999999874
Q ss_pred cccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee-cCCCCccccccccceEEEe
Q 016018 197 NIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTVL 275 (396)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~~ 275 (396)
.+ .+ ......+.++|.+|-+..... ........+..||+.+.+|+.+ ++|.. . .....+..
T Consensus 96 ----~p--~~--r~~~~~~~~~~~iyv~GG~~~-----~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r---~~~~~~~~ 157 (318)
T 2woz_A 96 ----LP--SA--RCLFGLGEVDDKIYVVAGKDL-----QTEASLDSVLCYDPVAAKWSEVKNLPIK--V---YGHNVISH 157 (318)
T ss_dssp ----BS--SC--BCSCEEEEETTEEEEEEEEBT-----TTCCEEEEEEEEETTTTEEEEECCCSSC--E---ESCEEEEE
T ss_pred ----CC--cc--ccccceEEECCEEEEEcCccC-----CCCcccceEEEEeCCCCCEeECCCCCCc--c---cccEEEEE
Confidence 21 21 122347888999998875431 0112235789999999999988 45542 1 12345678
Q ss_pred cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec------CCeEEEEECCCCc
Q 016018 276 NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY------YREACSYNLGTKE 349 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~ 349 (396)
+|+|+++..........-++|+++-. ..+|++.-.++.. ......++ .++.|++... ...+..||+++++
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPK--KGDWKDLAPMKTP-RSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETT--TTEEEEECCCSSC-CBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCC--CCEEEECCCCCCC-cccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 99999988753222111457888753 4679987654332 22222333 4667777642 1358899999999
Q ss_pred EEEEe
Q 016018 350 IKKLP 354 (396)
Q Consensus 350 ~~~~~ 354 (396)
|+.+.
T Consensus 234 W~~~~ 238 (318)
T 2woz_A 234 WEVMT 238 (318)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99875
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.48 E-value=9.8e-06 Score=83.29 Aligned_cols=216 Identities=7% Similarity=0.016 Sum_probs=127.7
Q ss_pred eCceEEEeEc-----CCcEEEEcchhhhhcccc-ccc---cCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccce
Q 016018 110 CHGIVCFALL-----SGRVVLANPAIREFRHLR-EHC---YHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLK 180 (396)
Q Consensus 110 c~GLlc~~~~-----~~~~~V~NP~T~~~~~LP-~~~---~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~ 180 (396)
.+|.|.+..+ .+.++++||.|++|..++ +.+ .|... .... ...... +=+++.++...... .....
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R-~~hs--~~~~~~--~~~lyv~GG~~~~~-~~~~d 469 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR-MCHT--FTTISR--NNQLLLIGGRKAPH-QGLSD 469 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCC-BSCE--EEEETT--TTEEEEECCBSSTT-CBCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccc-cceE--EEEEcc--CCEEEEEcCCCCCC-Ccccc
Confidence 4665544433 247999999999999998 421 11101 1111 111110 22467666543221 12356
Q ss_pred EEEEEcCCCccccccccccccccccccccCCcceEEE-cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec--
Q 016018 181 VEVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYF-RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP-- 257 (396)
Q Consensus 181 ~evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-- 257 (396)
+++|+..+++|+.++. ++.+ ......+.+ +|.+|-+..... . . .+..||+.+++|..++
T Consensus 470 v~~yd~~t~~W~~~~~------~p~~--R~~h~~~~~~~~~iyv~GG~~~--------~-~-~v~~yd~~t~~W~~~~~~ 531 (695)
T 2zwa_A 470 NWIFDMKTREWSMIKS------LSHT--RFRHSACSLPDGNVLILGGVTE--------G-P-AMLLYNVTEEIFKDVTPK 531 (695)
T ss_dssp CEEEETTTTEEEECCC------CSBC--CBSCEEEECTTSCEEEECCBCS--------S-C-SEEEEETTTTEEEECCCS
T ss_pred EEEEeCCCCcEEECCC------CCCC--cccceEEEEcCCEEEEECCCCC--------C-C-CEEEEECCCCceEEccCC
Confidence 9999999999999874 1122 122235664 999998865431 1 1 7999999999999886
Q ss_pred --CCCCccccccccceEEEec---CeeEEEEeecCCC-ccEEEEEEEccCCCCCC------eEEEEEecCCCCcceeEEE
Q 016018 258 --VPNILNEIDQEFSKLTVLN---ESLAFVLRDKYRK-SYEIQIWVMDEFGANEI------WKKLFTTEPFCEIKRPLSF 325 (396)
Q Consensus 258 --lP~~~~~~~~~~~~l~~~~---g~L~~~~~~~~~~-~~~~~IW~l~~~~~~~~------W~~~~~i~~~~~~~~p~~~ 325 (396)
+|.. .. ....+.++ |+|+++....... ...-++|+++-. ... |++....++.....+...+
T Consensus 532 g~~p~~--r~---~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R~~~~~~~ 604 (695)
T 2zwa_A 532 DEFFQN--SL---VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQRYGSQIKY 604 (695)
T ss_dssp SGGGGS--CC---BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCCBSCEEEE
T ss_pred CCCCCc--cc---ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCCcccceEEE
Confidence 3331 11 12334445 8899988763211 111356666632 234 8887765333334444555
Q ss_pred EeCCcEEEEec---------CCeEEEEECCCCcEEEEeec
Q 016018 326 CERGELIMEDY---------YREACSYNLGTKEIKKLPVL 356 (396)
Q Consensus 326 ~~~g~il~~~~---------~~~l~~yd~~t~~~~~~~~~ 356 (396)
.+++.|++... ...+..||+++++|+.+.++
T Consensus 605 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 605 ITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp EETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred eCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 56578888743 23599999999999965543
No 19
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.42 E-value=6.2e-05 Score=72.40 Aligned_cols=46 Identities=26% Similarity=0.452 Sum_probs=41.3
Q ss_pred CCCcHH----HHHHHhhcCCccccccccccchhhhhhhCChHHHHHHHhc
Q 016018 5 SDLPEE----LVFKILVLLPVDSLLCSKCVQKSWYSLITNSRFVVKHLRN 50 (396)
Q Consensus 5 ~~LP~D----ll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~ 50 (396)
..||+| |+..||+.|++++|+++.+|||+|+.++.++.+.+....+
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~ 61 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIER 61 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHh
Confidence 459999 9999999999999999999999999999998877766543
No 20
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.41 E-value=2.6e-05 Score=73.03 Aligned_cols=205 Identities=12% Similarity=0.003 Sum_probs=117.5
Q ss_pred CcEEEEcchhhhhccccccc-cCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCC-C-----------------------
Q 016018 121 GRVVLANPAIREFRHLREHC-YHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGS-G----------------------- 175 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~-~----------------------- 175 (396)
+.+.++||.|++|..+++.+ .+. ....+.. ++ =|++.++...... .
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r---~~~~~~~-~~-----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGM---AGHVTFV-HN-----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCC---SSEEEEE-ET-----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCCCccc---ccceEEE-EC-----CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 47999999999999998765 321 1121111 22 2566666432100 0
Q ss_pred --------cccceEEEEEcCCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEe
Q 016018 176 --------LCHLKVEVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFD 247 (396)
Q Consensus 176 --------~~~~~~evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD 247 (396)
.....+++|+..+++|+.++. .+ .+. ......+.++|.+|.+..... .......+..||
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~----~p--~~~-~~~~~~~~~~~~iyv~GG~~~------~~~~~~~v~~~d 223 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGE----SP--WYG-TAGAAVVNKGDKTWLINGEAK------PGLRTDAVFELD 223 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEE----CS--SCC-CBSCEEEEETTEEEEECCEEE------TTEECCCEEEEE
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCC----CC--CCC-cccccEEEECCEEEEEeeecC------CCcccCceEEEE
Confidence 012589999999999999874 11 111 111247888999998854320 011123577787
Q ss_pred C--CCceeeeec-CCCCccccccccceEEEecCeeEEEEeecCCC----------------ccEEEEEEEccCCCCCCeE
Q 016018 248 M--SDEVFQKLP-VPNILNEIDQEFSKLTVLNESLAFVLRDKYRK----------------SYEIQIWVMDEFGANEIWK 308 (396)
Q Consensus 248 ~--~~e~~~~i~-lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~----------------~~~~~IW~l~~~~~~~~W~ 308 (396)
+ ++.+|+.++ +|.. ........+..+|+|+++....... ...-++|+++-. ..+|+
T Consensus 224 ~d~~~~~W~~~~~~~~~---~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~ 298 (357)
T 2uvk_A 224 FTGNNLKWNKLAPVSSP---DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWD 298 (357)
T ss_dssp CC---CEEEECCCSSTT---TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CE
T ss_pred ecCCCCcEEecCCCCCC---cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC--CCcee
Confidence 6 899999873 4431 1112235788999999988753210 011356666642 46899
Q ss_pred EEEEecCCCCcceeEEEEeCCcEEEEecC-------CeEEEEECCCCcEEEEe
Q 016018 309 KLFTTEPFCEIKRPLSFCERGELIMEDYY-------REACSYNLGTKEIKKLP 354 (396)
Q Consensus 309 ~~~~i~~~~~~~~p~~~~~~g~il~~~~~-------~~l~~yd~~t~~~~~~~ 354 (396)
+.-.++... ... .++.-++.|++.... ..+..+++++++|.+..
T Consensus 299 ~~~~~p~~r-~~~-~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 299 KSGELSQGR-AYG-VSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEECSSCC-BSS-EEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eCCCCCCCc-ccc-eeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 987665432 222 234456777777431 25888999999987654
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.05 E-value=8.8e-07 Score=79.37 Aligned_cols=50 Identities=16% Similarity=0.259 Sum_probs=46.5
Q ss_pred CCCCCcHHHHHHHhhcCCccccccccccchhhhhhhCChHHHHHHHhccc
Q 016018 3 GFSDLPEELVFKILVLLPVDSLLCSKCVQKSWYSLITNSRFVVKHLRNQI 52 (396)
Q Consensus 3 ~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~~~ 52 (396)
+++.||+|++..||+.|++++|+|+.+|||+||.+..|+...+.++.+..
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 46789999999999999999999999999999999999999998888763
No 22
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.62 E-value=1.9e-05 Score=73.33 Aligned_cols=42 Identities=31% Similarity=0.575 Sum_probs=38.9
Q ss_pred CCCCCCcHHHHHHHhhcCCccccccccccchhhhhhhCChHH
Q 016018 2 AGFSDLPEELVFKILVLLPVDSLLCSKCVQKSWYSLITNSRF 43 (396)
Q Consensus 2 ~~~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F 43 (396)
..|+.||+|++.+||.+|+.+++++++.|||+|+.++.++..
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 568899999999999999999999999999999999987764
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.54 E-value=0.0014 Score=66.83 Aligned_cols=230 Identities=10% Similarity=-0.051 Sum_probs=123.4
Q ss_pred EEeeeCceEEEeEc--CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEE
Q 016018 106 LVGHCHGIVCFALL--SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEV 183 (396)
Q Consensus 106 ~~~sc~GLlc~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ev 183 (396)
.....+|.|.+..+ ...+.++||.|++|.++|+.+.++ ....+. .+ + +=||+.++...+.. .....+|+
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R---~~~s~~-~~-~---dg~iyv~GG~~~~~-~~~~~~e~ 318 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR---GYQSSA-TM-S---DGRVFTIGGSWSGG-VFEKNGEV 318 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC---SSCEEE-EC-T---TSCEEEECCCCCSS-SCCCCEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccc---cccceE-Ee-c---CCeEEEEeCcccCC-cccccceE
Confidence 33446787766654 247999999999999998765442 222211 11 1 22567766522211 12367999
Q ss_pred EEcCCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcc
Q 016018 184 YTLSADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILN 263 (396)
Q Consensus 184 ys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~ 263 (396)
|+..+++|..++.... .+++.. .....+..+|.+|.+......... ......+..||+.++.|.....+....
T Consensus 319 yd~~t~~W~~~~~~~~-~p~~~~---~~~~~~~~~~~iyv~Gg~~g~~~~---~~~~~~v~~yd~~~~~w~~~~~~~~~~ 391 (656)
T 1k3i_A 319 YSPSSKTWTSLPNAKV-NPMLTA---DKQGLYRSDNHAWLFGWKKGSVFQ---AGPSTAMNWYYTSGSGDVKSAGKRQSN 391 (656)
T ss_dssp EETTTTEEEEETTSCS-GGGCCC---CTTGGGTTTCSCCEEECGGGCEEE---CCSSSEEEEEECSTTCEEEEEEECEET
T ss_pred eCCCCCcceeCCCccc-cccccc---cccceeecCCceEEEECCCCcEEE---ecCccceeeeecCCcceeecCCccccc
Confidence 9999999998753100 011111 111234466777766533210000 011347899999999886431111000
Q ss_pred ---ccccccceEE---EecCeeEEEEeecC---CCc--cEEEEEEEccCCCCCCeEEEE--EecCCCCcceeEEEEeCCc
Q 016018 264 ---EIDQEFSKLT---VLNESLAFVLRDKY---RKS--YEIQIWVMDEFGANEIWKKLF--TTEPFCEIKRPLSFCERGE 330 (396)
Q Consensus 264 ---~~~~~~~~l~---~~~g~L~~~~~~~~---~~~--~~~~IW~l~~~~~~~~W~~~~--~i~~~~~~~~p~~~~~~g~ 330 (396)
.........+ ..+|+|.++..... ... ....|++.+- ....|++.. .++.. .......+..+|+
T Consensus 392 ~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~~mp~~-R~~~~~~~l~~g~ 468 (656)
T 1k3i_A 392 RGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP--GTSPNTVFASNGLYFA-RTFHTSVVLPDGS 468 (656)
T ss_dssp TEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCST--TSCCEEEECTTCCSSC-CBSCEEEECTTSC
T ss_pred cccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCC--CCCCeeEEccCCCCCC-cccCCeEECCCCC
Confidence 0000111112 24889988876421 010 0024555443 246798775 33322 2233344555888
Q ss_pred EEEEecC------------CeEEEEECCCCcEEEEe
Q 016018 331 LIMEDYY------------REACSYNLGTKEIKKLP 354 (396)
Q Consensus 331 il~~~~~------------~~l~~yd~~t~~~~~~~ 354 (396)
|++.... ..+..||+++++|+.+.
T Consensus 469 i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 469 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred EEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 8887531 35899999999998764
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.52 E-value=0.0016 Score=66.36 Aligned_cols=195 Identities=12% Similarity=0.014 Sum_probs=109.4
Q ss_pred cEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCcccccccccccc
Q 016018 122 RVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDFL 201 (396)
Q Consensus 122 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~~ 201 (396)
.+.++||.|++|..++..+.+. ...+.+..+. .+=+++.++.... ..+++|+..++.|..+.. .
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~---~~~~~~~~~~---~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~----~ 283 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKH---DMFCPGISMD---GNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPD----M 283 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSC---CCSSCEEEEC---TTSCEEEECSSST------TCEEEEEGGGTEEEECCC----C
T ss_pred EEEEEeCCCCcEEeCcccCCCC---CCccccccCC---CCCCEEEeCCCCC------CceEEecCcCCceeECCC----C
Confidence 5889999999999998765431 1111111211 1224666654221 379999999999999874 1
Q ss_pred ccccccccCCcceEEE-cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeec------CCCCccccccccceEEE
Q 016018 202 GAGTRFLKDNFECQYF-RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLP------VPNILNEIDQEFSKLTV 274 (396)
Q Consensus 202 ~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~------lP~~~~~~~~~~~~l~~ 274 (396)
+ .+ ......+.+ +|.+|-+..... +......+-.||+.+++|..++ +|.. . ...+..
T Consensus 284 ~--~~--R~~~s~~~~~dg~iyv~GG~~~------~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~---~---~~~~~~ 347 (656)
T 1k3i_A 284 Q--VA--RGYQSSATMSDGRVFTIGGSWS------GGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA---D---KQGLYR 347 (656)
T ss_dssp S--SC--CSSCEEEECTTSCEEEECCCCC------SSSCCCCEEEEETTTTEEEEETTSCSGGGCCC---C---TTGGGT
T ss_pred C--cc--ccccceEEecCCeEEEEeCccc------CCcccccceEeCCCCCcceeCCCccccccccc---c---ccceee
Confidence 1 11 111235666 999998865320 1112346889999999999873 2221 1 112233
Q ss_pred ecCeeEEEEeecC-------CCccEEEEEEEccCCCCCCeEEEEEecCC-------CCcceeEEE-EeCCcEEEEecC--
Q 016018 275 LNESLAFVLRDKY-------RKSYEIQIWVMDEFGANEIWKKLFTTEPF-------CEIKRPLSF-CERGELIMEDYY-- 337 (396)
Q Consensus 275 ~~g~L~~~~~~~~-------~~~~~~~IW~l~~~~~~~~W~~~~~i~~~-------~~~~~p~~~-~~~g~il~~~~~-- 337 (396)
.+++++++....+ ... ++.|-.+ ...|......... ......+.+ ..+++|++....
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~--v~~yd~~----~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTA--MNWYYTS----GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSE--EEEEECS----TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred cCCceEEEECCCCcEEEecCccc--eeeeecC----CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 5666666654321 122 4444443 2457653322211 011111111 136788877431
Q ss_pred -------C---eEEEEECCCCcEEEEe
Q 016018 338 -------R---EACSYNLGTKEIKKLP 354 (396)
Q Consensus 338 -------~---~l~~yd~~t~~~~~~~ 354 (396)
. .+..||+++++|..+.
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred CCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 1 6889999999998864
No 25
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.37 E-value=0.0036 Score=64.19 Aligned_cols=169 Identities=9% Similarity=-0.027 Sum_probs=101.5
Q ss_pred EEEEEEEeCCCCcccceEEEEEcCCCcccccc-ccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCc
Q 016018 164 VVRILCISDGSGLCHLKVEVYTLSADCWRELV-ANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNG 240 (396)
Q Consensus 164 Vv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~-~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~ 240 (396)
|+.++.... .....+.+|+..+++|+.+. ..+. -.++.+ ......+.+ +|.+|-+..... .....
T Consensus 400 iyv~GG~~~---~~~~~v~~yd~~~~~W~~~~~~~p~-~~~p~~--R~~hs~~~~~~~~~lyv~GG~~~------~~~~~ 467 (695)
T 2zwa_A 400 VFYMGGSNP---YRVNEILQLSIHYDKIDMKNIEVSS-SEVPVA--RMCHTFTTISRNNQLLLIGGRKA------PHQGL 467 (695)
T ss_dssp EEEECCBSS---SBCCCEEEEEECSSCEEEEECCCCC-SCCCCC--CBSCEEEEETTTTEEEEECCBSS------TTCBC
T ss_pred EEEECCCCC---CCcCcEEEEECCCCeEEEeccCCCC-CCCCcc--ccceEEEEEccCCEEEEEcCCCC------CCCcc
Confidence 555554322 22357899999999999987 2110 011121 222347888 999998865441 01123
Q ss_pred cEEEEEeCCCceeeee-cCCCCccccccccceEEEe-cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEec--CC
Q 016018 241 DFIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTVL-NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTE--PF 316 (396)
Q Consensus 241 ~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~--~~ 316 (396)
..+..||+.+.+|+.+ ++|.. . .....+.. +|+|+++....... ++|+.+-. ...|++.-... +.
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~-R----~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~--t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHT-R----FRHSACSLPDGNVLILGGVTEGP----AMLLYNVT--EEIFKDVTPKDEFFQ 536 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBC-C----BSCEEEECTTSCEEEECCBCSSC----SEEEEETT--TTEEEECCCSSGGGG
T ss_pred ccEEEEeCCCCcEEECCCCCCC-c----ccceEEEEcCCEEEEECCCCCCC----CEEEEECC--CCceEEccCCCCCCC
Confidence 4589999999999988 34431 1 12345564 99999988765322 56777642 46799876522 11
Q ss_pred CCccee-EEEEeC-CcEEEEecC--------CeEEEEECCCCc------EEEEee
Q 016018 317 CEIKRP-LSFCER-GELIMEDYY--------REACSYNLGTKE------IKKLPV 355 (396)
Q Consensus 317 ~~~~~p-~~~~~~-g~il~~~~~--------~~l~~yd~~t~~------~~~~~~ 355 (396)
....+. +.+..+ +.|++.... ..+..||+++++ |+.+.-
T Consensus 537 ~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 537 NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 122222 333333 667777431 369999999999 777653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.90 E-value=0.00025 Score=71.03 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=29.5
Q ss_pred CCCCCcHHHHHHHhhcCC-ccccccccccchhhhhh
Q 016018 3 GFSDLPEELVFKILVLLP-VDSLLCSKCVQKSWYSL 37 (396)
Q Consensus 3 ~~~~LP~Dll~eIL~rLP-~~sl~r~r~VcK~W~~l 37 (396)
.|+.||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 478999999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.27 E-value=0.0012 Score=65.98 Aligned_cols=33 Identities=6% Similarity=0.305 Sum_probs=31.4
Q ss_pred CCCcHHHHHHHhhcC-Cccccccccccchhhhhh
Q 016018 5 SDLPEELVFKILVLL-PVDSLLCSKCVQKSWYSL 37 (396)
Q Consensus 5 ~~LP~Dll~eIL~rL-P~~sl~r~r~VcK~W~~l 37 (396)
..||+|++.+||.+| |.+++.++..|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999987
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.24 E-value=6.2 Score=35.44 Aligned_cols=68 Identities=9% Similarity=0.114 Sum_probs=43.2
Q ss_pred cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeC---CcEEEE-ecCCeEEEEECCCCc
Q 016018 276 NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCER---GELIME-DYYREACSYNLGTKE 349 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~---g~il~~-~~~~~l~~yd~~t~~ 349 (396)
++.+.+.+... .. +.||-+... ...|.....+........-+.+..+ +.+++. ..++.+..||+++.+
T Consensus 171 ~~~~l~~~~~d--g~--i~i~d~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 171 ESRKFVTGGAD--NL--VKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTCEEEEEETT--SC--EEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCEEEEEeCC--Ce--EEEEEecCC--CcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 35555544433 44 999999853 3567777776543332334666676 666655 457789999998863
No 29
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.39 E-value=14 Score=37.68 Aligned_cols=67 Identities=9% Similarity=0.112 Sum_probs=42.3
Q ss_pred CeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeC---CcEEEE-ecCCeEEEEECCCCc
Q 016018 277 ESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCER---GELIME-DYYREACSYNLGTKE 349 (396)
Q Consensus 277 g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~---g~il~~-~~~~~l~~yd~~t~~ 349 (396)
|.+.+.+... .. +.||-+... ...+.....+........-+.+..+ +.+++. ..++.+..||+++++
T Consensus 170 ~~~l~sgs~d--g~--I~iwd~~~~--~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 170 SRKFVTGGAD--NL--VKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp GCCEEEEETT--SC--EEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCEEEEEECC--Ce--EEEEeccCC--cccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 5555444432 44 999999863 3557777766543322334566666 666665 447789999998863
No 30
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.15 E-value=12 Score=34.78 Aligned_cols=196 Identities=10% Similarity=0.096 Sum_probs=93.9
Q ss_pred eeCceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 109 HCHGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 109 sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
|.+++|.+.. ++.++|||..|++...+-....+ ......+.|.|. ++| +..+. . .-.+.|++..+
T Consensus 114 S~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~----~~~V~sv~fspd-g~~--lasgs-~------Dg~v~iWd~~~ 178 (420)
T 4gga_A 114 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP----GEYISSVAWIKE-GNY--LAVGT-S------SAEVQLWDVQQ 178 (420)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST----TCCEEEEEECTT-SSE--EEEEE-T------TSCEEEEETTT
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC----CCcEEEEEECCC-CCE--EEEEE-C------CCeEEEEEcCC
Confidence 5577776654 45999999999988765433221 123445666664 344 33321 1 25688888877
Q ss_pred Ccc-ccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcccccc
Q 016018 189 DCW-RELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQ 267 (396)
Q Consensus 189 ~~W-r~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 267 (396)
+.- +.... . ......+..+|.+-.-... ...+..+|..........+... ..
T Consensus 179 ~~~~~~~~~--------h---~~~v~~~s~~~~~l~sgs~------------d~~i~~~d~~~~~~~~~~~~~h---~~- 231 (420)
T 4gga_A 179 QKRLRNMTS--------H---SARVGSLSWNSYILSSGSR------------SGHIHHHDVRVAEHHVATLSGH---SQ- 231 (420)
T ss_dssp TEEEEEECC--------C---SSCEEEEEEETTEEEEEET------------TSEEEEEETTSSSCEEEEEECC---SS-
T ss_pred CcEEEEEeC--------C---CCceEEEeeCCCEEEEEeC------------CCceeEeeecccceeeEEeccc---cc-
Confidence 532 11111 0 0111244445543222222 2367777776544332222221 11
Q ss_pred ccceEE-EecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEe-CCcEEEEe---cCCeEEE
Q 016018 268 EFSKLT-VLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCE-RGELIMED---YYREACS 342 (396)
Q Consensus 268 ~~~~l~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~-~g~il~~~---~~~~l~~ 342 (396)
....+. ..+|...+.+... .. +.||-+.... ..+...............+++.. ++.++... .++.+..
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D--~~--v~i~~~~~~~--~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGND--NL--VNVWPSAPGE--GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp CEEEEEECTTSSEEEEEETT--SC--EEEEESSCCS--SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEE
T ss_pred ceeeeeecCCCCeeeeeecc--cc--ceEEeecccc--ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEE
Confidence 111222 2245544333332 44 8999887532 22222222222111122233443 33455442 3567888
Q ss_pred EECCCCcEEE
Q 016018 343 YNLGTKEIKK 352 (396)
Q Consensus 343 yd~~t~~~~~ 352 (396)
||+.+++...
T Consensus 306 wd~~t~~~~~ 315 (420)
T 4gga_A 306 WNVCSGACLS 315 (420)
T ss_dssp EETTTTEEEE
T ss_pred EeCCccccce
Confidence 9998887544
No 31
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=85.66 E-value=20 Score=32.35 Aligned_cols=198 Identities=7% Similarity=-0.020 Sum_probs=98.5
Q ss_pred eeCc--eEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEc
Q 016018 109 HCHG--IVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTL 186 (396)
Q Consensus 109 sc~G--Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~ 186 (396)
+.+| +|+....++.+.|||..+++....-..... ......+.+.|..+++ +.... . .-.+.+++.
T Consensus 82 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~--l~s~~-~------d~~i~iwd~ 148 (383)
T 3ei3_B 82 HPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGP----GDAITGMKFNQFNTNQ--LFVSS-I------RGATTLRDF 148 (383)
T ss_dssp CSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCST----TCBEEEEEEETTEEEE--EEEEE-T------TTEEEEEET
T ss_pred CCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCc----CCceeEEEeCCCCCCE--EEEEe-C------CCEEEEEEC
Confidence 3344 455555566899999988876654332111 2234556666532222 22221 1 256888888
Q ss_pred CCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccc
Q 016018 187 SADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEID 266 (396)
Q Consensus 187 ~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 266 (396)
.++..+..... ...... ...-...-+|.+...... ...|..+|+..+....+.....
T Consensus 149 ~~~~~~~~~~~----~~~~~~--v~~~~~~~~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~h~~----- 205 (383)
T 3ei3_B 149 SGSVIQVFAKT----DSWDYW--YCCVDVSVSRQMLATGDS------------TGRLLLLGLDGHEIFKEKLHKA----- 205 (383)
T ss_dssp TSCEEEEEECC----CCSSCC--EEEEEEETTTTEEEEEET------------TSEEEEEETTSCEEEEEECSSS-----
T ss_pred CCCceEEEecc----CCCCCC--eEEEEECCCCCEEEEECC------------CCCEEEEECCCCEEEEeccCCC-----
Confidence 86555444321 000000 000011113332222222 2478889987665555443221
Q ss_pred cccceEEE-ecCe-eEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEe-CCcEEEE-ecCCeEEE
Q 016018 267 QEFSKLTV-LNES-LAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCE-RGELIME-DYYREACS 342 (396)
Q Consensus 267 ~~~~~l~~-~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~-~g~il~~-~~~~~l~~ 342 (396)
....+.. -+|. +.+.+... .. +.||-+..... .-.....+... ....-+.+.. +|..++. ..++.+..
T Consensus 206 -~v~~~~~~~~~~~~l~s~~~d--~~--i~iwd~~~~~~--~~~~~~~~~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 206 -KVTHAEFNPRCDWLMATSSVD--AT--VKLWDLRNIKD--KNSYIAEMPHE-KPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp -CEEEEEECSSCTTEEEEEETT--SE--EEEEEGGGCCS--TTCEEEEEECS-SCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred -cEEEEEECCCCCCEEEEEeCC--CE--EEEEeCCCCCc--ccceEEEecCC-CceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 1112222 2344 44443332 45 99999986431 12333333332 2233466667 7776665 45789999
Q ss_pred EECCCCcE
Q 016018 343 YNLGTKEI 350 (396)
Q Consensus 343 yd~~t~~~ 350 (396)
||+++.+.
T Consensus 278 wd~~~~~~ 285 (383)
T 3ei3_B 278 YSSYDWSK 285 (383)
T ss_dssp EETTBTTS
T ss_pred EECCCCcc
Confidence 99988653
No 32
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=85.59 E-value=17 Score=31.30 Aligned_cols=192 Identities=9% Similarity=-0.029 Sum_probs=94.3
Q ss_pred EEeeeCceEEEeEc-CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEE
Q 016018 106 LVGHCHGIVCFALL-SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVY 184 (396)
Q Consensus 106 ~~~sc~GLlc~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evy 184 (396)
+....+|-+.+... .+.++++|| +++...+..+.. .....++.+|+... +.... . ..-.+.+|
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~-----~~~~~~i~~~~~g~---l~v~~---~----~~~~i~~~ 167 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK-----GSYPSFITLGSDNA---LWFTE---N----QNNAIGRI 167 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-----TCCEEEEEECTTSC---EEEEE---T----TTTEEEEE
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC-----CCCCceEEEcCCCC---EEEEe---C----CCCEEEEE
Confidence 44445777766653 458999999 776665432211 11235666776532 22211 1 11456666
Q ss_pred EcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCc
Q 016018 185 TLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNIL 262 (396)
Q Consensus 185 s~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~ 262 (396)
+. ++....... + .. ... ..++.+ +|.+|+.... ...|..+|. +.++..+.+|..
T Consensus 168 ~~-~g~~~~~~~-----~--~~-~~~-~~~i~~~~~g~l~v~~~~------------~~~i~~~~~-~g~~~~~~~~~~- 223 (299)
T 2z2n_A 168 TE-SGDITEFKI-----P--TP-ASG-PVGITKGNDDALWFVEII------------GNKIGRITT-SGEITEFKIPTP- 223 (299)
T ss_dssp CT-TCCEEEEEC-----S--ST-TCC-EEEEEECTTSSEEEEETT------------TTEEEEECT-TCCEEEEECSST-
T ss_pred cC-CCcEEEeeC-----C--CC-CCc-ceeEEECCCCCEEEEccC------------CceEEEECC-CCcEEEEECCCC-
Confidence 66 555444321 0 00 000 123444 4777554322 247999999 777776666631
Q ss_pred cccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEE
Q 016018 263 NEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREAC 341 (396)
Q Consensus 263 ~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~ 341 (396)
.. ....+.. -+|.|.+.... ... +.+|-. .+ . ...+.++........+.+ .+|.+++....+.++
T Consensus 224 --~~-~~~~i~~~~~g~l~v~~~~--~~~--i~~~d~--~g---~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~ 289 (299)
T 2z2n_A 224 --NA-RPHAITAGAGIDLWFTEWG--ANK--IGRLTS--NN---I-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIG 289 (299)
T ss_dssp --TC-CEEEEEECSTTCEEEEETT--TTE--EEEEET--TT---E-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEE
T ss_pred --CC-CceeEEECCCCCEEEeccC--Cce--EEEECC--CC---c-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEE
Confidence 11 1123333 36776654422 233 444433 11 1 122323211111233556 778888876677899
Q ss_pred EEECCCCcEE
Q 016018 342 SYNLGTKEIK 351 (396)
Q Consensus 342 ~yd~~t~~~~ 351 (396)
.||+++++++
T Consensus 290 ~~~~~~~~~~ 299 (299)
T 2z2n_A 290 KLTLIKDNME 299 (299)
T ss_dssp EEEEC-----
T ss_pred EEEcCcccCC
Confidence 9999988764
No 33
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=83.66 E-value=20 Score=32.21 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=59.4
Q ss_pred cEEEEEeCCCceeeee---c-CCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecC
Q 016018 241 DFIFSFDMSDEVFQKL---P-VPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEP 315 (396)
Q Consensus 241 ~~il~fD~~~e~~~~i---~-lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~ 315 (396)
..|..+|+.+.++..+ . .|.. .. ....+.. -+|+..++......+. +.||.++.. ...+.....+..
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~---~~-~~~~i~~spdg~~l~v~~~~~~~~--i~v~~~~~~--~g~~~~~~~~~~ 304 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVN---AQ-GSGDIHLSPDGKYLYASNRLKADG--VAIFKVDET--NGTLTKVGYQLT 304 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSC---CC-CEEEEEECTTSSEEEEEECSSSCE--EEEEEECTT--TCCEEEEEEEEC
T ss_pred CeEEEEEecCCceEEeEEEecCCCC---CC-CcccEEECCCCCEEEEECCCCCCE--EEEEEEcCC--CCcEEEeeEecC
Confidence 3688888877766443 1 2221 11 1122332 3677544444331345 999999742 245666666654
Q ss_pred CCCcceeEEEEeCCcEEEEec--CCeEEE--EECCCCcEEEEe
Q 016018 316 FCEIKRPLSFCERGELIMEDY--YREACS--YNLGTKEIKKLP 354 (396)
Q Consensus 316 ~~~~~~p~~~~~~g~il~~~~--~~~l~~--yd~~t~~~~~~~ 354 (396)
.....-+++..+|+.++... .+.+.. +|.++++++.+.
T Consensus 305 -g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 305 -GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp -SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred -CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 22234577888887555543 445555 678888887653
No 34
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.68 E-value=29 Score=31.74 Aligned_cols=189 Identities=12% Similarity=0.079 Sum_probs=95.4
Q ss_pred CceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCc
Q 016018 111 HGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADC 190 (396)
Q Consensus 111 ~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~ 190 (396)
++.++....++.+.|||..+++...+-.... ......+.+.|. +++ +.++. . .-.+.+|+..++.
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~-----~~~v~~v~~s~~-~~~--l~~~~-~------dg~i~iwd~~~~~ 167 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDE-----STYVASVKWSHD-GSF--LSVGL-G------NGLVDIYDVESQT 167 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCT-----TCCEEEEEECTT-SSE--EEEEE-T------TSCEEEEETTTCC
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCC-----CCCEEEEEECCC-CCE--EEEEC-C------CCeEEEEECcCCe
Confidence 3444444455699999999988766543321 123455666663 333 32221 1 1468888887653
Q ss_pred cc-cccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcccccccc
Q 016018 191 WR-ELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEF 269 (396)
Q Consensus 191 Wr-~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~ 269 (396)
-. .+.. . ......+..+|.+...... ...|..+|+....-....+... ....
T Consensus 168 ~~~~~~~--------~---~~~v~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~----~~~v 220 (401)
T 4aez_A 168 KLRTMAG--------H---QARVGCLSWNRHVLSSGSR------------SGAIHHHDVRIANHQIGTLQGH----SSEV 220 (401)
T ss_dssp EEEEECC--------C---SSCEEEEEEETTEEEEEET------------TSEEEEEETTSSSCEEEEEECC----SSCE
T ss_pred EEEEecC--------C---CCceEEEEECCCEEEEEcC------------CCCEEEEecccCcceeeEEcCC----CCCe
Confidence 21 1111 0 0111244445554333322 2478899987433222122111 1111
Q ss_pred ceEEEe-cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCC-cEEEEe---cCCeEEEEE
Q 016018 270 SKLTVL-NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERG-ELIMED---YYREACSYN 344 (396)
Q Consensus 270 ~~l~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g-~il~~~---~~~~l~~yd 344 (396)
..+... +|.+.+.+... .. +.||-+... .....+.........+.+..++ .++... .++.+..||
T Consensus 221 ~~~~~~~~~~~l~s~~~d--~~--v~iwd~~~~------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 221 CGLAWRSDGLQLASGGND--NV--VQIWDARSS------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp EEEEECTTSSEEEEEETT--SC--EEEEETTCS------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred eEEEEcCCCCEEEEEeCC--Ce--EEEccCCCC------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 222222 45554444432 44 999988752 2233333222223446666654 555554 377899999
Q ss_pred CCCCcEE
Q 016018 345 LGTKEIK 351 (396)
Q Consensus 345 ~~t~~~~ 351 (396)
+++++..
T Consensus 291 ~~~~~~~ 297 (401)
T 4aez_A 291 AATGARV 297 (401)
T ss_dssp TTTCCEE
T ss_pred CCCCCEE
Confidence 9888754
No 35
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=81.60 E-value=28 Score=31.48 Aligned_cols=116 Identities=9% Similarity=0.086 Sum_probs=64.2
Q ss_pred ceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCcc---c-cccccceEEEecCeeEEEEeecC
Q 016018 213 ECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILN---E-IDQEFSKLTVLNESLAFVLRDKY 287 (396)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~---~-~~~~~~~l~~~~g~L~~~~~~~~ 287 (396)
.++..+|.+|...... .|.+||.++.+.. ..+++.... . ........+..+|.|.+....
T Consensus 48 ~p~v~~~~v~~~~~~g-------------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-- 112 (376)
T 3q7m_A 48 HPALADNVVYAADRAG-------------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-- 112 (376)
T ss_dssp CCEEETTEEEEECTTS-------------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT--
T ss_pred ccEEECCEEEEEcCCC-------------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC--
Confidence 4888999999765443 7999999755432 334433100 0 111123455667777664322
Q ss_pred CCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEEEEECCCCcEEEE
Q 016018 288 RKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREACSYNLGTKEIKKL 353 (396)
Q Consensus 288 ~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~~~~ 353 (396)
. .|..++-...+..|.... .. .....|.. .++.+++...++.++.+|.++++..+-
T Consensus 113 -g----~l~a~d~~tG~~~W~~~~--~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 113 -A----QVYALNTSDGTVAWQTKV--AG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp -S----EEEEEETTTCCEEEEEEC--SS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred -C----EEEEEECCCCCEEEEEeC--CC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 2 345555321245675532 21 11223432 356666666678899999999986654
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.96 E-value=29 Score=31.05 Aligned_cols=29 Identities=10% Similarity=0.045 Sum_probs=19.4
Q ss_pred eEEEEeCCcEEEE-ecCCeEEEEECCCCcE
Q 016018 322 PLSFCERGELIME-DYYREACSYNLGTKEI 350 (396)
Q Consensus 322 p~~~~~~g~il~~-~~~~~l~~yd~~t~~~ 350 (396)
-+++..+|..++. ..++.+..||+++++.
T Consensus 210 ~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 210 AVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 3556677765554 4577899999988764
No 37
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=79.16 E-value=32 Score=30.04 Aligned_cols=73 Identities=8% Similarity=0.033 Sum_probs=44.6
Q ss_pred cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec--CCeEEEE--ECCCCcEE
Q 016018 276 NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY--YREACSY--NLGTKEIK 351 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~--~~~l~~y--d~~t~~~~ 351 (396)
+|+..++... .... +.+|-++.. ...+.....+..... ...+++..+|..++... ++.+..| |.++++++
T Consensus 241 dg~~l~v~~~-~~~~--i~v~d~~~~--~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 241 DGRHLYACDR-TASL--ITVFSVSED--GSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLH 314 (343)
T ss_dssp TSSEEEEEET-TTTE--EEEEEECTT--SCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEE
T ss_pred CCCEEEEEec-CCCE--EEEEEEcCC--CCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceee
Confidence 4554443332 2345 999999853 245777666654322 34467778887665543 4667777 77788777
Q ss_pred EEe
Q 016018 352 KLP 354 (396)
Q Consensus 352 ~~~ 354 (396)
.+.
T Consensus 315 ~~~ 317 (343)
T 1ri6_A 315 EKG 317 (343)
T ss_dssp EEE
T ss_pred Ecc
Confidence 654
No 38
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.66 E-value=32 Score=29.76 Aligned_cols=205 Identities=7% Similarity=0.004 Sum_probs=102.0
Q ss_pred eEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccc
Q 016018 113 IVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWR 192 (396)
Q Consensus 113 Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr 192 (396)
|+......+.++++||.++ ...+..+. ....++.+|+... ++... . ....+.+|+..++..+
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~-------~~~~~l~~~~dg~---l~v~~---~----~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS-------HHQNGHCLNKQGH---LIACS---H----GLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC-------SSEEEEEECTTCC---EEEEE---T----TTTEEEEECSTTCCEE
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC-------CCcceeeECCCCc---EEEEe---c----CCCeEEEEcCCCCcEE
Confidence 4444444568999999998 55554321 1245677777543 33221 1 1146778887777665
Q ss_pred cccccccccccccccccCCcceEEE--cceEEEEEec-cC----CcccccCCCCccEEEEEeCCCceeeeecCCCCcccc
Q 016018 193 ELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWD-KS----VGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEI 265 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~-~~----~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~ 265 (396)
.+.... ........ ..+.+ +|.+|.-... .. .............|..+|.. .+...+.-..
T Consensus 104 ~~~~~~----~~~~~~~~--~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----- 171 (296)
T 3e5z_A 104 SIADSF----EGKKLNSP--NDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR----- 171 (296)
T ss_dssp EEECEE----TTEECCCC--CCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-----
T ss_pred EEeecc----CCCCCCCC--CCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-----
Confidence 543210 00110001 12333 5776653211 00 00000000112479999987 4554432111
Q ss_pred ccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCe-EEEEEecCCCCcceeEEEEeCCcEEEEecCCeEEEE
Q 016018 266 DQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIW-KKLFTTEPFCEIKRPLSFCERGELIMEDYYREACSY 343 (396)
Q Consensus 266 ~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W-~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~~y 343 (396)
.. ...++. -+|++. +.... ... +.+|-++.. ... .....+........-+++..+|.|++.. .+.+..|
T Consensus 172 ~~-~~gi~~s~dg~~l-v~~~~-~~~--i~~~~~~~~---g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~ 242 (296)
T 3e5z_A 172 VK-PNGLAFLPSGNLL-VSDTG-DNA--THRYCLNAR---GETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVL 242 (296)
T ss_dssp SS-EEEEEECTTSCEE-EEETT-TTE--EEEEEECSS---SCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEE
T ss_pred CC-CccEEECCCCCEE-EEeCC-CCe--EEEEEECCC---CcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEE
Confidence 00 012332 356655 44332 234 777777632 334 3333332111222346777888888876 7789999
Q ss_pred ECCCCcEEEEeec
Q 016018 344 NLGTKEIKKLPVL 356 (396)
Q Consensus 344 d~~t~~~~~~~~~ 356 (396)
|++.+.++.+...
T Consensus 243 ~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 243 TPDGDELGRVLTP 255 (296)
T ss_dssp CTTSCEEEEEECS
T ss_pred CCCCCEEEEEECC
Confidence 9998777776543
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=78.22 E-value=23 Score=32.89 Aligned_cols=197 Identities=9% Similarity=0.045 Sum_probs=90.7
Q ss_pred Cc-eEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCC
Q 016018 111 HG-IVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSAD 189 (396)
Q Consensus 111 ~G-Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~ 189 (396)
++ +|.....++.+.|||..+++...+-....+ .....++.|.|..+++ ++... . .-.+.+++..++
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH----~~~V~~l~f~p~~~~~-l~s~s--~------D~~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA----GGSITGLKFNPLNTNQ-FYASS--M------EGTTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSS----SCCCCEEEECSSCTTE-EEEEC--S------SSCEEEEETTSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCC----CCCEEEEEEeCCCCCE-EEEEe--C------CCEEEEeeccCC
Confidence 44 555555667999999988875443222111 1223456677654444 22221 1 145788888766
Q ss_pred ccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcccccccc
Q 016018 190 CWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEF 269 (396)
Q Consensus 190 ~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~ 269 (396)
.-+..... ..... ....-.+.-+|.+...... ...|..+|++++....+..-. ...
T Consensus 198 ~~~~~~~~----~~~~~--~~~~~~~~~~~~~l~~g~~------------dg~i~~wd~~~~~~~~~~~h~------~~v 253 (435)
T 4e54_B 198 ILRVFASS----DTINI--WFCSLDVSASSRMVVTGDN------------VGNVILLNMDGKELWNLRMHK------KKV 253 (435)
T ss_dssp EEEEEECC----SSCSC--CCCCEEEETTTTEEEEECS------------SSBEEEEESSSCBCCCSBCCS------SCE
T ss_pred ceeEEecc----CCCCc--cEEEEEECCCCCEEEEEeC------------CCcEeeeccCcceeEEEeccc------ceE
Confidence 54433320 00000 0000011223433322222 236888888765443332111 111
Q ss_pred ceEEEe-cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecCCeEEEEECCC
Q 016018 270 SKLTVL-NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYYREACSYNLGT 347 (396)
Q Consensus 270 ~~l~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t 347 (396)
..+... +|.-.++....+ .. +.||-+.......... ....+. ....-+++..+|..|+. ..++.+..||+++
T Consensus 254 ~~v~~~p~~~~~~~s~s~d-~~--v~iwd~~~~~~~~~~~--~~~~h~-~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 254 THVALNPCCDWFLATASVD-QT--VKIWDLRQVRGKASFL--YSLPHR-HPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp EEEEECTTCSSEEEEEETT-SB--CCEEETTTCCSSSCCS--BCCBCS-SCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred EeeeecCCCceEEEEecCc-ce--eeEEecccccccceEE--Eeeecc-ccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 122221 344333333322 44 8999887532111110 000011 11122344567766655 4567899999988
Q ss_pred CcE
Q 016018 348 KEI 350 (396)
Q Consensus 348 ~~~ 350 (396)
...
T Consensus 328 ~~~ 330 (435)
T 4e54_B 328 WDC 330 (435)
T ss_dssp SSS
T ss_pred Ccc
Confidence 653
No 40
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=77.65 E-value=36 Score=29.79 Aligned_cols=197 Identities=11% Similarity=-0.011 Sum_probs=94.6
Q ss_pred eeCce--EEEeEcCCcEEEEcc-hhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEE
Q 016018 109 HCHGI--VCFALLSGRVVLANP-AIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYT 185 (396)
Q Consensus 109 sc~GL--lc~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys 185 (396)
+.+|- |+....++.+.|||. .+++...+..... ......+.+.+ +++-+. .. . .-.+.+|+
T Consensus 65 ~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-----~~~v~~l~~~~--~~~l~s-~~--~------d~~i~iwd 128 (342)
T 1yfq_A 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEA-----NLGICRICKYG--DDKLIA-AS--W------DGLIEVID 128 (342)
T ss_dssp EESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCC-----CSCEEEEEEET--TTEEEE-EE--T------TSEEEEEC
T ss_pred CCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCC-----CCceEEEEeCC--CCEEEE-Ec--C------CCeEEEEc
Confidence 33554 555555679999999 8888766654111 12344566776 443222 11 1 14677776
Q ss_pred cCCCc-------cccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCC-ce--eee
Q 016018 186 LSADC-------WRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSD-EV--FQK 255 (396)
Q Consensus 186 ~~t~~-------Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~-e~--~~~ 255 (396)
..+.. .+.+.. +. .......+.+++.. .+.... ...|..+|+.+ .. ...
T Consensus 129 ~~~~~~~~~~~~~~~~~~----~~-----~~~~v~~~~~~~~~-l~~~~~-----------d~~i~i~d~~~~~~~~~~~ 187 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNN----TK-----VKNKIFTMDTNSSR-LIVGMN-----------NSQVQWFRLPLCEDDNGTI 187 (342)
T ss_dssp HHHHTTBCEEEEESCSSS----SS-----SCCCEEEEEECSSE-EEEEES-----------TTEEEEEESSCCTTCCCEE
T ss_pred ccccccccccccCCeeeE----Ee-----eCCceEEEEecCCc-EEEEeC-----------CCeEEEEECCcccccccee
Confidence 65300 111111 11 00111133333222 111111 23788999987 32 322
Q ss_pred ecCCCCccccccccceEEEe--cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC---------cceeEE
Q 016018 256 LPVPNILNEIDQEFSKLTVL--NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE---------IKRPLS 324 (396)
Q Consensus 256 i~lP~~~~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~---------~~~p~~ 324 (396)
...+.. .....+... +|.+.+++... .. +.||.++..+..........+..... ....+.
T Consensus 188 ~~~~~~-----~~i~~i~~~~~~~~~l~~~~~d--g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 258 (342)
T 1yfq_A 188 EESGLK-----YQIRDVALLPKEQEGYACSSID--GR--VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIE 258 (342)
T ss_dssp EECSCS-----SCEEEEEECSGGGCEEEEEETT--SE--EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEE
T ss_pred eecCCC-----CceeEEEECCCCCCEEEEEecC--Cc--EEEEEEcCCCcccccccceeeecccccccccccceeEEEEE
Confidence 322221 111223333 45655544432 44 99999986411111122222222111 123355
Q ss_pred EEeCCcEEEE-ecCCeEEEEECCCCcEE
Q 016018 325 FCERGELIME-DYYREACSYNLGTKEIK 351 (396)
Q Consensus 325 ~~~~g~il~~-~~~~~l~~yd~~t~~~~ 351 (396)
+..++..++. ..++.+..||+++++..
T Consensus 259 ~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 259 FSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp ECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 6677765555 45778999999988753
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=76.94 E-value=39 Score=29.90 Aligned_cols=68 Identities=9% Similarity=-0.036 Sum_probs=42.7
Q ss_pred cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEEEEECCC--CcEEEE
Q 016018 276 NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREACSYNLGT--KEIKKL 353 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~~yd~~t--~~~~~~ 353 (396)
+|.+.+.+.. ... +.||-++.. .....+.....-..-+.+..+|.++....++.+..||+++ ++|..+
T Consensus 213 ~~~~l~~~~~--d~~--i~i~d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 213 NGSRVAWVSH--DST--VCLADADKK------MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp SSSEEEEEET--TTE--EEEEEGGGT------TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEEC
T ss_pred CCCEEEEEeC--CCE--EEEEECCCC------ceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEe
Confidence 4544443332 244 999998853 1333443322222446677888888888888899999998 776654
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=76.41 E-value=43 Score=30.08 Aligned_cols=190 Identities=12% Similarity=0.063 Sum_probs=96.7
Q ss_pred eeCc-eEEEeE-cCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEc
Q 016018 109 HCHG-IVCFAL-LSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTL 186 (396)
Q Consensus 109 sc~G-Llc~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~ 186 (396)
+-+| .|.+.. .++.+.|||+.+++....-... ....++.++|.. ++-++. . . ..-.+.+++.
T Consensus 82 spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-------~~~~~~~~s~dg-~~l~~~-~---~----~~~~v~~~d~ 145 (391)
T 1l0q_A 82 SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-------KSPLGLALSPDG-KKLYVT-N---N----GDKTVSVINT 145 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-------SSEEEEEECTTS-SEEEEE-E---T----TTTEEEEEET
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-------CCcceEEECCCC-CEEEEE-e---C----CCCEEEEEEC
Confidence 3344 454444 3468999999998765543221 123456666543 222122 1 1 1257888888
Q ss_pred CCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeee-ecCCCCcc
Q 016018 187 SADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQK-LPVPNILN 263 (396)
Q Consensus 187 ~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~ 263 (396)
.++.....-. ....+ ..+.+ +|..-++.... ...|..+|+.+.+... ++...
T Consensus 146 ~~~~~~~~~~----~~~~~-------~~~~~~~dg~~l~~~~~~-----------~~~v~~~d~~~~~~~~~~~~~~--- 200 (391)
T 1l0q_A 146 VTKAVINTVS----VGRSP-------KGIAVTPDGTKVYVANFD-----------SMSISVIDTVTNSVIDTVKVEA--- 200 (391)
T ss_dssp TTTEEEEEEE----CCSSE-------EEEEECTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEEECSS---
T ss_pred CCCcEEEEEe----cCCCc-------ceEEECCCCCEEEEEeCC-----------CCEEEEEECCCCeEEEEEecCC---
Confidence 7765432211 00000 12222 35433333322 2478899998876533 23221
Q ss_pred ccccccceEEE-ecCeeEEEEeec-CCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEE-E-ecCCe
Q 016018 264 EIDQEFSKLTV-LNESLAFVLRDK-YRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIM-E-DYYRE 339 (396)
Q Consensus 264 ~~~~~~~~l~~-~~g~L~~~~~~~-~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~-~-~~~~~ 339 (396)
....+.. -+|+..++.... .... +.+|-++. ......+..... ...+.+..+|+.++ . ..++.
T Consensus 201 ----~~~~~~~~~~g~~l~~~~~~~~~~~--v~~~d~~~------~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 201 ----APSGIAVNPEGTKAYVTNVDKYFNT--VSMIDTGT------NKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNT 267 (391)
T ss_dssp ----EEEEEEECTTSSEEEEEEECSSCCE--EEEEETTT------TEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTE
T ss_pred ----CccceEECCCCCEEEEEecCcCCCc--EEEEECCC------CeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCE
Confidence 1112222 245544444431 2344 88887764 133444543222 23356667786554 4 34678
Q ss_pred EEEEECCCCcEEE
Q 016018 340 ACSYNLGTKEIKK 352 (396)
Q Consensus 340 l~~yd~~t~~~~~ 352 (396)
+..||+++++...
T Consensus 268 v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 268 VSVIDTATNTITA 280 (391)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCcEEE
Confidence 9999999987654
No 43
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=71.29 E-value=49 Score=29.01 Aligned_cols=113 Identities=11% Similarity=0.159 Sum_probs=59.1
Q ss_pred cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEE
Q 016018 218 RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIW 296 (396)
Q Consensus 218 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW 296 (396)
+|.+||..... ..|..+|..+.++..+..+.. . ....++. -+|+|.+......... -.|+
T Consensus 55 ~g~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~~---~--~~~~i~~~~dg~l~v~~~~~~~~~--~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVFE------------GNIFKINPETKEIKRPFVSHK---A--NPAAIKIHKDGRLFVCYLGDFKST--GGIF 115 (333)
T ss_dssp TSCEEEEETTT------------CEEEEECTTTCCEEEEEECSS---S--SEEEEEECTTSCEEEEECTTSSSC--CEEE
T ss_pred CCCEEEEECCC------------CEEEEEeCCCCcEEEEeeCCC---C--CcceEEECCCCcEEEEeCCCCCCC--ceEE
Confidence 57887765433 379999999888766532210 0 1123333 3677766544321111 2345
Q ss_pred EEccCCCCCCeEEEEEec-CCC-CcceeEEEEeCCcEEEEecC-------CeEEEEECCCCcEEEE
Q 016018 297 VMDEFGANEIWKKLFTTE-PFC-EIKRPLSFCERGELIMEDYY-------REACSYNLGTKEIKKL 353 (396)
Q Consensus 297 ~l~~~~~~~~W~~~~~i~-~~~-~~~~p~~~~~~g~il~~~~~-------~~l~~yd~~t~~~~~~ 353 (396)
.++..+ ..-... +. ... ....-+.+..+|.+++.... ..++.+|.++++++.+
T Consensus 116 ~~d~~~--~~~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 116 AATENG--DNLQDI--IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECTTS--CSCEEE--ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEeCCC--CEEEEE--EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 555322 111111 21 111 11223556677888876542 4799999988776654
No 44
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=70.84 E-value=95 Score=31.51 Aligned_cols=201 Identities=9% Similarity=0.035 Sum_probs=95.4
Q ss_pred CceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCc
Q 016018 111 HGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADC 190 (396)
Q Consensus 111 ~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~ 190 (396)
+|-|-+....+.+..+||.++++..+...+.+..-......++..|+... +.++.. .-.+..|+..++.
T Consensus 320 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~----lWiGt~-------~~Gl~~~~~~~~~ 388 (795)
T 4a2l_A 320 QGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN----LWIGTN-------DGGLNLYNPITQR 388 (795)
T ss_dssp TSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC----EEEEES-------SSCEEEECTTTCC
T ss_pred CcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC----EEEEEC-------CCCeEEEcCCCCc
Confidence 44444433334677778877776665432211000111233444454321 333321 1356677777776
Q ss_pred cccccccccccccccc-ccc-CCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccc
Q 016018 191 WRELVANIDFLGAGTR-FLK-DNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEID 266 (396)
Q Consensus 191 Wr~~~~~~~~~~~~~~-~~~-~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 266 (396)
++...... .... .+. ....+++. +|.+.|+.... ..|..+|..++++..+..... ....
T Consensus 389 ~~~~~~~~----~~~~~~l~~~~v~~i~~d~~g~~lWigt~~------------~Gl~~~d~~~~~~~~~~~~~~-~l~~ 451 (795)
T 4a2l_A 389 FTSYTLQE----DESARGIGSNNIKAVYVDEKKSLVYIGTHA------------GGLSILHRNSGQVENFNQRNS-QLVN 451 (795)
T ss_dssp EEEECCC----------CCSCSCEEEEEEETTTTEEEEEETT------------TEEEEEETTTCCEEEECTTTS-CCSC
T ss_pred EEEEecCC----CCcccCCCCccEEEEEEcCCCCEEEEEeCc------------CceeEEeCCCCcEEEeecCCC-CcCC
Confidence 66543200 0000 010 11123333 57756776543 379999999998887753211 0011
Q ss_pred cccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEe----cCCCCcceeEEEEeCCcEEEEecCCeEE
Q 016018 267 QEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTT----EPFCEIKRPLSFCERGELIMEDYYREAC 341 (396)
Q Consensus 267 ~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i----~~~~~~~~p~~~~~~g~il~~~~~~~l~ 341 (396)
.....+.+ .+|.|.+... .. +.++-.+ ...|...... .........+....+|.|.+... +.++
T Consensus 452 ~~v~~i~~d~~g~lwigt~----~G--l~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~ 520 (795)
T 4a2l_A 452 ENVYAILPDGEGNLWLGTL----SA--LVRFNPE----QRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLS 520 (795)
T ss_dssp SCEEEEEECSSSCEEEEES----SC--EEEEETT----TTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEE
T ss_pred CeeEEEEECCCCCEEEEec----Cc--eeEEeCC----CCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceE
Confidence 11123333 3577665443 22 4333222 2345443211 01111122344456677777665 6799
Q ss_pred EEECCCCcE
Q 016018 342 SYNLGTKEI 350 (396)
Q Consensus 342 ~yd~~t~~~ 350 (396)
.||.+++++
T Consensus 521 ~~~~~~~~~ 529 (795)
T 4a2l_A 521 VFKQEGLDI 529 (795)
T ss_dssp EEEEETTEE
T ss_pred EEeCCCCeE
Confidence 999988877
No 45
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=70.70 E-value=57 Score=28.92 Aligned_cols=200 Identities=7% Similarity=-0.076 Sum_probs=101.5
Q ss_pred CceEEEeEc-----CCcEEEEcchhhhhcc-ccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEE
Q 016018 111 HGIVCFALL-----SGRVVLANPAIREFRH-LREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVY 184 (396)
Q Consensus 111 ~GLlc~~~~-----~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evy 184 (396)
+|++.+... ++.+.++||.|++... ++...... ......-++.++. +. +..... ..-.+.++
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~-~lg~~~~~i~~~~---~~-lyv~~~-------~~~~v~vi 69 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGF-KLGDVAQSMVIRD---GI-GWIVVN-------NSHVIFAI 69 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSS-CCBSCEEEEEEET---TE-EEEEEG-------GGTEEEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCc-ccCccceEEEEEC---CE-EEEEEc-------CCCEEEEE
Confidence 466655554 4589999999988754 22110000 0001122344442 22 222221 12568888
Q ss_pred EcCCCcc-ccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCc
Q 016018 185 TLSADCW-RELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNIL 262 (396)
Q Consensus 185 s~~t~~W-r~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~ 262 (396)
+..++.- +.++. .. .+ . .-.+.-+|.+|...... ..|..+|+.+.+.. .++++...
T Consensus 70 D~~t~~~~~~i~~----~~--~p---~-~i~~~~~g~lyv~~~~~------------~~v~~iD~~t~~~~~~i~~g~~~ 127 (328)
T 3dsm_A 70 DINTFKEVGRITG----FT--SP---R-YIHFLSDEKAYVTQIWD------------YRIFIINPKTYEITGYIECPDMD 127 (328)
T ss_dssp ETTTCCEEEEEEC----CS--SE---E-EEEEEETTEEEEEEBSC------------SEEEEEETTTTEEEEEEECTTCC
T ss_pred ECcccEEEEEcCC----CC--CC---c-EEEEeCCCeEEEEECCC------------CeEEEEECCCCeEEEEEEcCCcc
Confidence 8877643 22221 00 11 1 11222478877755222 37999999987764 46655411
Q ss_pred cccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecC-----
Q 016018 263 NEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYY----- 337 (396)
Q Consensus 263 ~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~----- 337 (396)
... ..-..++..+++|.+.... .... +.++-++. ... ..+|.... ...-+.+..+|++++....
T Consensus 128 ~~~-~~p~~i~~~~~~lyv~~~~-~~~~--v~viD~~t----~~~--~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 128 MES-GSTEQMVQYGKYVYVNCWS-YQNR--ILKIDTET----DKV--VDELTIGI-QPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTT-CBCCCEEEETTEEEEEECT-TCCE--EEEEETTT----TEE--EEEEECSS-CBCCCEECTTSEEEEEBCCBCTTC
T ss_pred ccC-CCcceEEEECCEEEEEcCC-CCCE--EEEEECCC----CeE--EEEEEcCC-CccceEEcCCCCEEEEECCCccCC
Confidence 000 0112344467887766431 1233 55444332 222 23343321 1123566778888777543
Q ss_pred ------CeEEEEECCCCcEE-EEee
Q 016018 338 ------REACSYNLGTKEIK-KLPV 355 (396)
Q Consensus 338 ------~~l~~yd~~t~~~~-~~~~ 355 (396)
+.+..+|.+++++. .+.+
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred ccccCCceEEEEECCCCeEEEEEec
Confidence 57999999999876 3444
No 46
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=70.27 E-value=57 Score=28.75 Aligned_cols=74 Identities=8% Similarity=0.117 Sum_probs=45.7
Q ss_pred ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-c-CCeEEEE--ECCCCcE
Q 016018 275 LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-Y-YREACSY--NLGTKEI 350 (396)
Q Consensus 275 ~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~-~~~l~~y--d~~t~~~ 350 (396)
-+|+..++.... ... +.||-++.. ..+.....+........-+++..+|+.++.. . .+.+..| |.+++++
T Consensus 249 pdG~~l~v~~~~-~~~--v~v~~~~~~---g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 249 HDGHFLYVSNRG-YNT--LAVFAVTAD---GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp TTSCEEEEEEET-TTE--EEEEEECGG---GCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCCEEEEEeCC-CCE--EEEEEECCC---CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 467644444332 245 999999853 3466666665422223457788888755553 3 3566677 8888888
Q ss_pred EEEe
Q 016018 351 KKLP 354 (396)
Q Consensus 351 ~~~~ 354 (396)
+.+.
T Consensus 323 ~~~~ 326 (347)
T 3hfq_A 323 SLLQ 326 (347)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 8765
No 47
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=70.09 E-value=38 Score=30.53 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=58.6
Q ss_pred eEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCccccccccceEEEecCeeEEEEeecCCCccE
Q 016018 214 CQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYE 292 (396)
Q Consensus 214 ~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~ 292 (396)
.+..+|.+|....+. .|.++|.++.+.. ..+++... ....+..+|.+.+.... .
T Consensus 99 ~~~~~~~v~v~~~~g-------------~l~a~d~~tG~~~W~~~~~~~~------~~~p~~~~~~v~v~~~~---g--- 153 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKA-------------QVYALNTSDGTVAWQTKVAGEA------LSRPVVSDGLVLIHTSN---G--- 153 (376)
T ss_dssp EEEETTEEEEEETTS-------------EEEEEETTTCCEEEEEECSSCC------CSCCEEETTEEEEECTT---S---
T ss_pred ceEeCCEEEEEcCCC-------------EEEEEECCCCCEEEEEeCCCce------EcCCEEECCEEEEEcCC---C---
Confidence 566778888755443 7999998765432 33444311 11223446655543211 1
Q ss_pred EEEEEEccCCCCCCeEEEEEecCC--CCcceeEEEEeCCcEEEEecCCeEEEEECCCCcEEEE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPF--CEIKRPLSFCERGELIMEDYYREACSYNLGTKEIKKL 353 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~--~~~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~~~~ 353 (396)
.|..++-...+..|.....-+.. .....|.. .++.+++...++.++.+|.++++..+-
T Consensus 154 -~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 154 -QLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp -EEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred -eEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 34445522124557654321111 11123333 355665555577899999999987654
No 48
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=69.89 E-value=43 Score=31.07 Aligned_cols=118 Identities=13% Similarity=0.079 Sum_probs=67.2
Q ss_pred cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee---cC--C----CCccccccccceEEE--ecCeeEEEEeec
Q 016018 218 RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL---PV--P----NILNEIDQEFSKLTV--LNESLAFVLRDK 286 (396)
Q Consensus 218 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i---~l--P----~~~~~~~~~~~~l~~--~~g~L~~~~~~~ 286 (396)
+|.++|.+..+ .|..+|+.++.-..+ .+ + ........ ..++. -+++|++.....
T Consensus 237 dG~~~~vs~~g-------------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~--q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 237 AGRLVWPTYTG-------------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW--QQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp TTEEEEEBTTS-------------EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS--SCEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEeCCC-------------EEEEEECCCCcceeecceeccccccccccccCCCc--ceeeECCCCCeEEEEeccc
Confidence 78888876654 799999987753222 10 0 00000111 11222 245666655432
Q ss_pred C-----CCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCc-EEEEec--CCeEEEEECCCCcEE-EEeecC
Q 016018 287 Y-----RKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGE-LIMEDY--YREACSYNLGTKEIK-KLPVLP 357 (396)
Q Consensus 287 ~-----~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-il~~~~--~~~l~~yd~~t~~~~-~~~~~~ 357 (396)
. ... =+||+++- ..+..+.+|..... ..-+.+..+|+ .|+..+ ++.+..||..+.+.. .+...+
T Consensus 302 ~~~~hk~~~--~~V~viD~----~t~kv~~~i~vg~~-~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 302 DEWRHKTAS--RFVVVLDA----KTGERLAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp CTTCTTSCE--EEEEEEET----TTCCEEEEEEEEEE-ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred cccccCCCC--CEEEEEEC----CCCeEEEEEECCCC-cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence 1 122 68999994 34666777765321 23477888875 666643 568999999998764 454443
No 49
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=69.72 E-value=69 Score=29.52 Aligned_cols=29 Identities=7% Similarity=0.059 Sum_probs=19.9
Q ss_pred EEEEeCCcEEEEecCCeEEEEECCCCcEE
Q 016018 323 LSFCERGELIMEDYYREACSYNLGTKEIK 351 (396)
Q Consensus 323 ~~~~~~g~il~~~~~~~l~~yd~~t~~~~ 351 (396)
.+++.+|.+|....++.+..||+++++.+
T Consensus 406 ~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 406 NEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp EEECTTSSCEEEECSSEEEECCCC-----
T ss_pred EEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 45678888888777889999999988765
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=67.71 E-value=51 Score=29.11 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=56.7
Q ss_pred ccEEEEEeCCCceeeeecCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC
Q 016018 240 GDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE 318 (396)
Q Consensus 240 ~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~ 318 (396)
...+..+|.++.++..+...... ... ..++. -+|+|+++........ +.+|-++. ..+.....+.....
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~--~~p--~~~a~spdg~l~~~~~~~~~~~--v~~~~~~~----g~~~~~~~~~~~~~ 86 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAAT--QNP--TYLALSAKDCLYSVDKEDDEGG--IAAWQIDG----QTAHKLNTVVAPGT 86 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEC--SCC--CCEEECTTCEEEEEEEETTEEE--EEEEEEET----TEEEEEEEEEEESC
T ss_pred CEEEEEEcCCCCeEEEeeeeecc--CCc--ceEEEccCCeEEEEEecCCCce--EEEEEecC----CcEEEeeeeecCCC
Confidence 35688888888887765432211 111 12332 3788555544322234 88888853 34555554322111
Q ss_pred cceeEEEEeCCcEEEEe--cCCeEEEEECC-CCcEEEE
Q 016018 319 IKRPLSFCERGELIMED--YYREACSYNLG-TKEIKKL 353 (396)
Q Consensus 319 ~~~p~~~~~~g~il~~~--~~~~l~~yd~~-t~~~~~~ 353 (396)
...-+++..+|+.++.. .++.+..||+. +++.+.+
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 12346778888755553 35678899985 4444443
No 51
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=66.96 E-value=59 Score=27.69 Aligned_cols=204 Identities=13% Similarity=0.101 Sum_probs=100.8
Q ss_pred EEeeeCceEEEeE-cCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEE
Q 016018 106 LVGHCHGIVCFAL-LSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVY 184 (396)
Q Consensus 106 ~~~sc~GLlc~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evy 184 (396)
+.-+.+|-+.+.. .++.+.++||..+....++...... .......++.+++..+. ++... .. ....+.+|
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~-~~~~~p~~i~~~~~~g~--l~v~~-~~-----~~~~i~~~ 105 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRD-SQLLYPNRVAVVRNSGD--IIVTE-RS-----PTHQIQIY 105 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSST-TCBSSEEEEEEETTTTE--EEEEE-CG-----GGCEEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCc-ccccCceEEEEEcCCCe--EEEEc-CC-----CCCEEEEE
Confidence 3334567666654 3458999999866655565422110 01123456666533332 22221 10 02456777
Q ss_pred EcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCc
Q 016018 185 TLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNIL 262 (396)
Q Consensus 185 s~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~ 262 (396)
+..+..-+.+.. . . ... ..++.+ +|.+|..... ...|..+|...+....+..+...
T Consensus 106 d~~g~~~~~~~~-----~--~--~~~-~~~i~~~~~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 106 NQYGQFVRKFGA-----T--I--LQH-PRGVTVDNKGRIIVVECK------------VMRVIIFDQNGNVLHKFGCSKHL 163 (286)
T ss_dssp CTTSCEEEEECT-----T--T--CSC-EEEEEECTTSCEEEEETT------------TTEEEEECTTSCEEEEEECTTTC
T ss_pred CCCCcEEEEecC-----c--c--CCC-ceEEEEeCCCCEEEEECC------------CCEEEEEcCCCCEEEEeCCCCcc
Confidence 743332222221 0 0 000 113333 5776654322 24799999877766665443211
Q ss_pred cccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCccee--EEEEeCCcEEEEecC-C
Q 016018 263 NEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRP--LSFCERGELIMEDYY-R 338 (396)
Q Consensus 263 ~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~il~~~~~-~ 338 (396)
. ....++. -+|.|.+..... .. +.+|-.+ + .. ...+........| +++..+|.+++.... +
T Consensus 164 ---~-~p~~i~~~~~g~l~v~~~~~--~~--i~~~~~~--g---~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 164 ---E-FPNGVVVNDKQEIFISDNRA--HC--VKVFNYE--G---QY--LRQIGGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp ---S-SEEEEEECSSSEEEEEEGGG--TE--EEEEETT--C---CE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred ---C-CcEEEEECCCCCEEEEECCC--CE--EEEEcCC--C---CE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 1 1122333 357766543322 33 6666532 1 12 2234322112234 556677888887653 3
Q ss_pred -eEEEEECCCCcEEEEee
Q 016018 339 -EACSYNLGTKEIKKLPV 355 (396)
Q Consensus 339 -~l~~yd~~t~~~~~~~~ 355 (396)
.+..||.+.+.++.+..
T Consensus 229 ~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 229 FNLTIFTQDGQLISALES 246 (286)
T ss_dssp CEEEEECTTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEEcc
Confidence 89999988777776654
No 52
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=66.63 E-value=51 Score=32.25 Aligned_cols=118 Identities=11% Similarity=0.052 Sum_probs=62.9
Q ss_pred ceEEEcceEEEEEe-ccCCcccccCCCCccEEEEEeC-CC--ceeeeecCCCCcccc-----ccccceEEEecCeeEEEE
Q 016018 213 ECQYFRGACYWILW-DKSVGINYNNLVNGDFIFSFDM-SD--EVFQKLPVPNILNEI-----DQEFSKLTVLNESLAFVL 283 (396)
Q Consensus 213 ~~v~~~G~lywl~~-~~~~~~~~~~~~~~~~il~fD~-~~--e~~~~i~lP~~~~~~-----~~~~~~l~~~~g~L~~~~ 283 (396)
.++..+|.+|.... .. .|.++|. .+ +.|+. +++...... +.....++..+|+|++..
T Consensus 57 ~P~v~~g~vyv~~~~~~-------------~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 122 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFPN-------------NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ 122 (571)
T ss_dssp CCEEETTEEEEECSTTT-------------CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC
T ss_pred ccEEECCEEEEEeCCCC-------------EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEe
Confidence 47889999998765 33 6999998 54 34543 333210000 001123455677776543
Q ss_pred eecCCCccEEEEEEEccCCCCCCeEEEEEec-CCCC-cceeEEEEeCCcEEEEec------CCeEEEEECCCCcEEEE
Q 016018 284 RDKYRKSYEIQIWVMDEFGANEIWKKLFTTE-PFCE-IKRPLSFCERGELIMEDY------YREACSYNLGTKEIKKL 353 (396)
Q Consensus 284 ~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~-~~~~-~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~~~~ 353 (396)
.. -.|..++-...+..|+....-. .... ...|+. .+|.+++... ++.++.||.+|++..+-
T Consensus 123 ~d-------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 123 AN-------GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp TT-------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CC-------CEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 21 1355555322245676542110 0001 134443 3555555443 46899999999987763
No 53
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=65.14 E-value=73 Score=28.05 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=38.5
Q ss_pred CeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecC--CCCcceeEEEEeCCcEEEE-ecCCeEEEEECCC-CcEEE
Q 016018 277 ESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEP--FCEIKRPLSFCERGELIME-DYYREACSYNLGT-KEIKK 352 (396)
Q Consensus 277 g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~--~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t-~~~~~ 352 (396)
|.+.+.+... .. +.||-++... ..+.... +.. ......-+.+..+|..++. ..++.+..||+++ ++++.
T Consensus 221 ~~~l~s~~~d--g~--i~iwd~~~~~--~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~ 293 (379)
T 3jrp_A 221 RSYLASVSQD--RT--CIIWTQDNEQ--GPWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 293 (379)
T ss_dssp SEEEEEEETT--SC--EEEEEESSTT--SCCEEEE-SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred CCeEEEEeCC--CE--EEEEeCCCCC--ccceeee-eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence 4555444432 44 9999998632 2333322 221 1122233566677765554 5677899999884 34544
Q ss_pred E
Q 016018 353 L 353 (396)
Q Consensus 353 ~ 353 (396)
+
T Consensus 294 ~ 294 (379)
T 3jrp_A 294 A 294 (379)
T ss_dssp E
T ss_pred c
Confidence 4
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=64.91 E-value=83 Score=28.60 Aligned_cols=196 Identities=11% Similarity=0.030 Sum_probs=95.6
Q ss_pred eeCceEEEeE-cCCcEEEEcchhhhhcc-ccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEc
Q 016018 109 HCHGIVCFAL-LSGRVVLANPAIREFRH-LREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTL 186 (396)
Q Consensus 109 sc~GLlc~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~ 186 (396)
+.+|-+++.. .++.+.+|++.+++... ++... ....++.++|..+ + ++... .. .-.+.+|+.
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~-l~~~~-~~------~~~i~~~d~ 241 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG-------KWSKILLYDPIRD-L-VYCSN-WI------SEDISVIDR 241 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS-------SSEEEEEEETTTT-E-EEEEE-TT------TTEEEEEET
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC-------CCeeEEEEcCCCC-E-EEEEe-cC------CCcEEEEEC
Confidence 4466665554 34689999998865443 33211 1234566676533 2 22221 11 146888888
Q ss_pred CCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee-cCCCCcc
Q 016018 187 SADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL-PVPNILN 263 (396)
Q Consensus 187 ~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~ 263 (396)
.++.....-. .... ...+.+ +|...+....... ........|..+|+.+.+.... ..+.
T Consensus 242 ~~~~~~~~~~------~~~~-----~~~~~~~~~g~~l~~~~~~~~----~~~~~dg~i~~~d~~~~~~~~~~~~~~--- 303 (433)
T 3bws_A 242 KTKLEIRKTD------KIGL-----PRGLLLSKDGKELYIAQFSAS----NQESGGGRLGIYSMDKEKLIDTIGPPG--- 303 (433)
T ss_dssp TTTEEEEECC------CCSE-----EEEEEECTTSSEEEEEEEESC----TTCSCCEEEEEEETTTTEEEEEEEEEE---
T ss_pred CCCcEEEEec------CCCC-----ceEEEEcCCCCEEEEEECCCC----ccccCCCeEEEEECCCCcEEeeccCCC---
Confidence 7764322111 0000 012222 4544444332100 0000134788999987655332 2111
Q ss_pred ccccccceEE-EecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecC-----
Q 016018 264 EIDQEFSKLT-VLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYY----- 337 (396)
Q Consensus 264 ~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~----- 337 (396)
....+. .-+|+..++.... ... +.+|-++. ......+..... ..-+++..+|..++....
T Consensus 304 ----~~~~~~~~~~g~~l~~~~~~-~~~--v~v~d~~~------~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~ 369 (433)
T 3bws_A 304 ----NKRHIVSGNTENKIYVSDMC-CSK--IEVYDLKE------KKVQKSIPVFDK-PNTIALSPDGKYLYVSCRGPNHP 369 (433)
T ss_dssp ----CEEEEEECSSTTEEEEEETT-TTE--EEEEETTT------TEEEEEEECSSS-EEEEEECTTSSEEEEEECCCCCT
T ss_pred ----CcceEEECCCCCEEEEEecC-CCE--EEEEECCC------CcEEEEecCCCC-CCeEEEcCCCCEEEEEecCCCcc
Confidence 011122 2245433333322 244 89998774 233444443222 234667777876555332
Q ss_pred -----------CeEEEEECCCCcEEE
Q 016018 338 -----------REACSYNLGTKEIKK 352 (396)
Q Consensus 338 -----------~~l~~yd~~t~~~~~ 352 (396)
+.+..||+++++...
T Consensus 370 ~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 370 TEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp TTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred ccccccccccceEEEEEECCCCcEEE
Confidence 489999999987654
No 55
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=63.67 E-value=65 Score=26.99 Aligned_cols=189 Identities=13% Similarity=0.067 Sum_probs=92.9
Q ss_pred EEeeeCceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEE
Q 016018 106 LVGHCHGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYT 185 (396)
Q Consensus 106 ~~~sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys 185 (396)
+.-+.+|-+.+....+.++++||.++....++.... ....++.+|+... +.... . ..-.+.+|+
T Consensus 72 i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~------~~p~~i~~~~~g~---l~v~~-~------~~~~i~~~~ 135 (270)
T 1rwi_B 72 LAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL------NYPEGLAVDTQGA---VYVAD-R------GNNRVVKLA 135 (270)
T ss_dssp EEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSC------SSEEEEEECTTCC---EEEEE-G------GGTEEEEEC
T ss_pred eEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCc------CCCcceEECCCCC---EEEEE-C------CCCEEEEEE
Confidence 333446766665555589999998887666653221 1245677787432 33221 1 113556665
Q ss_pred cCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcc
Q 016018 186 LSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILN 263 (396)
Q Consensus 186 ~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~ 263 (396)
.++........ .. .... .++.+ +|.+|+..... ..|..||..+..........
T Consensus 136 ~~~~~~~~~~~--------~~-~~~p-~~i~~~~~g~l~v~~~~~------------~~i~~~~~~~~~~~~~~~~~--- 190 (270)
T 1rwi_B 136 AGSKTQTVLPF--------TG-LNDP-DGVAVDNSGNVYVTDTDN------------NRVVKLEAESNNQVVLPFTD--- 190 (270)
T ss_dssp TTCCSCEECCC--------CS-CCSC-CCEEECTTCCEEEEEGGG------------TEEEEECTTTCCEEECCCSS---
T ss_pred CCCceeEeecc--------cc-CCCc-eeEEEeCCCCEEEEECCC------------CEEEEEecCCCceEeecccC---
Confidence 44433222110 00 0111 24444 57876654332 47999999876654332221
Q ss_pred ccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCccee--EEEEeCCcEEEEec-CCe
Q 016018 264 EIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRP--LSFCERGELIMEDY-YRE 339 (396)
Q Consensus 264 ~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~il~~~~-~~~ 339 (396)
.. ....++. -+|.|.+.... ... +.+|-.+. ..... +. ......| +++..+|.+++... ++.
T Consensus 191 -~~-~p~~i~~d~~g~l~v~~~~--~~~--v~~~~~~~---~~~~~----~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~ 256 (270)
T 1rwi_B 191 -IT-APWGIAVDEAGTVYVTEHN--TNQ--VVKLLAGS---TTSTV----LP-FTGLNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp -CC-SEEEEEECTTCCEEEEETT--TSC--EEEECTTC---SCCEE----CC-CCSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred -CC-CceEEEECCCCCEEEEECC--CCc--EEEEcCCC---Cccee----ec-cCCCCCceeEEECCCCCEEEEECCCCE
Confidence 01 1123333 35666654432 233 55554332 11111 11 1122334 45556778777654 567
Q ss_pred EEEEECCCCc
Q 016018 340 ACSYNLGTKE 349 (396)
Q Consensus 340 l~~yd~~t~~ 349 (396)
+..|++..++
T Consensus 257 v~~~~~~~~~ 266 (270)
T 1rwi_B 257 VVKLTSLEHH 266 (270)
T ss_dssp EEEECCCGGG
T ss_pred EEEEcCCCcc
Confidence 8888877654
No 56
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=63.62 E-value=88 Score=28.50 Aligned_cols=56 Identities=7% Similarity=-0.053 Sum_probs=39.3
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCc-EEEEec--CCeEEEEECCCCcEEEE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGE-LIMEDY--YREACSYNLGTKEIKKL 353 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-il~~~~--~~~l~~yd~~t~~~~~~ 353 (396)
=+||+.+- ...+...+|+... ....+.+..+|+ +++..+ ++.+..||.++.+....
T Consensus 298 ~~V~VID~----~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTG----LVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEEC----CCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 36888884 3467777776432 234577788887 666654 57899999999887643
No 57
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=62.23 E-value=73 Score=27.08 Aligned_cols=190 Identities=8% Similarity=0.060 Sum_probs=94.6
Q ss_pred eeCceEEEeEc--CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEc
Q 016018 109 HCHGIVCFALL--SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTL 186 (396)
Q Consensus 109 sc~GLlc~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~ 186 (396)
..+|-+.+... .+.+.++|+..+....+.... .....++.+|+..+ ++... . ..-.+.+|+.
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~------~~~~~~i~~~~~g~---l~v~~---~----~~~~i~~~~~ 149 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATI------LQHPRGVTVDNKGR---IIVVE---C----KVMRVIIFDQ 149 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTT------CSCEEEEEECTTSC---EEEEE---T----TTTEEEEECT
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCcc------CCCceEEEEeCCCC---EEEEE---C----CCCEEEEEcC
Confidence 35777766663 568999996555444443321 11235667777532 33221 1 1145666765
Q ss_pred CCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccc
Q 016018 187 SADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNE 264 (396)
Q Consensus 187 ~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~ 264 (396)
.+..-+.... . ..... ..++.+ +|.+|..... ...|..||...+....+..+..
T Consensus 150 ~g~~~~~~~~-----~---~~~~~-p~~i~~~~~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g~--- 205 (286)
T 1q7f_A 150 NGNVLHKFGC-----S---KHLEF-PNGVVVNDKQEIFISDNR------------AHCVKVFNYEGQYLRQIGGEGI--- 205 (286)
T ss_dssp TSCEEEEEEC-----T---TTCSS-EEEEEECSSSEEEEEEGG------------GTEEEEEETTCCEEEEESCTTT---
T ss_pred CCCEEEEeCC-----C---CccCC-cEEEEECCCCCEEEEECC------------CCEEEEEcCCCCEEEEEccCCc---
Confidence 4433222221 0 00011 124444 4776654332 2479999998776666644321
Q ss_pred cccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEEEE
Q 016018 265 IDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREACSY 343 (396)
Q Consensus 265 ~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~~y 343 (396)
.. ....++. .+|.|.+..... ... +.+|-.+ ..-..............-+++..+|.+++...++.+..|
T Consensus 206 ~~-~p~~i~~d~~G~l~v~~~~~-~~~--i~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~ 276 (286)
T 1q7f_A 206 TN-YPIGVGINSNGEILIADNHN-NFN--LTIFTQD-----GQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIY 276 (286)
T ss_dssp SC-SEEEEEECTTCCEEEEECSS-SCE--EEEECTT-----SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEE
T ss_pred cC-CCcEEEECCCCCEEEEeCCC-CEE--EEEECCC-----CCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEE
Confidence 01 1122333 467776654432 114 7777422 122222222211111233667778888887667778888
Q ss_pred ECCC
Q 016018 344 NLGT 347 (396)
Q Consensus 344 d~~t 347 (396)
+...
T Consensus 277 ~~~~ 280 (286)
T 1q7f_A 277 RYVQ 280 (286)
T ss_dssp ECSC
T ss_pred Eccc
Confidence 7654
No 58
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=61.60 E-value=80 Score=27.32 Aligned_cols=204 Identities=9% Similarity=0.013 Sum_probs=98.0
Q ss_pred CceEEEeE-cCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCC
Q 016018 111 HGIVCFAL-LSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSAD 189 (396)
Q Consensus 111 ~GLlc~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~ 189 (396)
+|-|.+.+ ..+.++.++|.|++...+..+. ...++.+++..+ ++... ...+.+|+..++
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~--------~~~~i~~~~dG~---l~v~~---------~~~l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA--------PVSSVALRQSGG---YVATI---------GTKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS--------CEEEEEEBTTSS---EEEEE---------TTEEEEEETTTT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC--------ceEEEEECCCCC---EEEEE---------CCeEEEEECCCC
Confidence 45554544 3458999999998775553321 234566776544 22211 156788888888
Q ss_pred ccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee---cCCCCccc
Q 016018 190 CWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL---PVPNILNE 264 (396)
Q Consensus 190 ~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i---~lP~~~~~ 264 (396)
.++.+... ....+.... ..+.+ +|.+|.-....... ..........|..+|.....-... ..|.
T Consensus 84 ~~~~~~~~----~~~~~~~~~--~di~~d~dG~l~~~~~~~~~~-~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pn---- 152 (297)
T 3g4e_A 84 SAVVLATV----DNDKKNNRF--NDGKVDPAGRYFAGTMAEETA-PAVLERHQGALYSLFPDHHVKKYFDQVDISN---- 152 (297)
T ss_dssp EEEEEEEC----CTTCSSEEE--EEEEECTTSCEEEEEEECCSB-TTBCCTTCEEEEEECTTSCEEEEEEEESBEE----
T ss_pred cEEEEEec----CCCCCCCCC--CCEEECCCCCEEEecCCcccc-cccccCCCcEEEEEECCCCEEEEeecccccc----
Confidence 77765431 100110001 13333 57866543222000 000011235788888764322211 1111
Q ss_pred cccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEec-CCCCccee--EEEEeCCcEEEEec-CCe
Q 016018 265 IDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTE-PFCEIKRP--LSFCERGELIMEDY-YRE 339 (396)
Q Consensus 265 ~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~-~~~~~~~p--~~~~~~g~il~~~~-~~~ 339 (396)
.++. -+|+..+++... ... +.+|-++.. .........+. .......| +++..+|.|++... .+.
T Consensus 153 ------gi~~spdg~~lyv~~~~-~~~--i~~~~~d~~--~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 153 ------GLDWSLDHKIFYYIDSL-SYS--VDAFDYDLQ--TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp ------EEEECTTSCEEEEEEGG-GTE--EEEEEECTT--TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred ------ceEEcCCCCEEEEecCC-CCc--EEEEeccCC--CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE
Confidence 2222 245533333322 133 555555411 22333222221 11111233 55667888887754 457
Q ss_pred EEEEECCCCcE-EEEeec
Q 016018 340 ACSYNLGTKEI-KKLPVL 356 (396)
Q Consensus 340 l~~yd~~t~~~-~~~~~~ 356 (396)
+..||++++++ ..+..+
T Consensus 222 v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EEEECTTTCCEEEEEECS
T ss_pred EEEEcCCCceEEEEEECC
Confidence 99999997664 555544
No 59
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=58.85 E-value=91 Score=27.12 Aligned_cols=97 Identities=5% Similarity=-0.031 Sum_probs=59.0
Q ss_pred cEEEEEeCCCcee-eeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCc
Q 016018 241 DFIFSFDMSDEVF-QKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEI 319 (396)
Q Consensus 241 ~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~ 319 (396)
..|..+|+++.+- ..+++|+.. . -..+...+++|+++.... + .+|+.+- ..-..+.+|+...
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~--F---geGit~~g~~ly~ltw~~--~----~v~v~D~----~t~~~~~ti~~~~-- 127 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRY--F---GEGISDWKDKIVGLTWKN--G----LGFVWNI----RNLRQVRSFNYDG-- 127 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTC--C---EEEEEEETTEEEEEESSS--S----EEEEEET----TTCCEEEEEECSS--
T ss_pred ceEEEEECCCCcEEEEEecCCcc--c---eeEEEEeCCEEEEEEeeC--C----EEEEEEC----ccCcEEEEEECCC--
Confidence 4799999998765 567777621 1 123566788888775532 3 3666663 2244566666532
Q ss_pred ceeEEEEeCCcEEEEec-CCeEEEEECCCCcE-EEEee
Q 016018 320 KRPLSFCERGELIMEDY-YREACSYNLGTKEI-KKLPV 355 (396)
Q Consensus 320 ~~p~~~~~~g~il~~~~-~~~l~~yd~~t~~~-~~~~~ 355 (396)
...++..+|+.++..+ ...+..+|++|.++ ..+.+
T Consensus 128 -eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 128 -EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp -CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred -CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 2344445565555543 56799999998765 44554
No 60
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=58.70 E-value=87 Score=26.82 Aligned_cols=92 Identities=10% Similarity=0.023 Sum_probs=49.4
Q ss_pred cEEEEEeCC-Ccee----eeecCCCCccccccccceEE-EecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEec
Q 016018 241 DFIFSFDMS-DEVF----QKLPVPNILNEIDQEFSKLT-VLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTE 314 (396)
Q Consensus 241 ~~il~fD~~-~e~~----~~i~lP~~~~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~ 314 (396)
..|..||+. +.++ ..+.... ... ..++ ..+|.|.+.. ... +.+|-.+ + .-. ..+.
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~~-----~~p-~~i~~d~~G~l~v~~----~~~--v~~~~~~--g---~~~--~~~~ 253 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVEP-----GKT-DGLRVDAGGLIWASA----GDG--VHVLTPD--G---DEL--GRVL 253 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCSS-----SCC-CSEEEBTTSCEEEEE----TTE--EEEECTT--S---CEE--EEEE
T ss_pred CeEEEEEECCCCcCcCCCeEeeCCC-----CCC-CeEEECCCCCEEEEc----CCe--EEEECCC--C---CEE--EEEE
Confidence 478899986 4444 1221111 001 1233 3578877655 234 6555432 2 222 2333
Q ss_pred CCCCcceeEEEE-eCCcEEEEecCCeEEEEECCCCcEEE
Q 016018 315 PFCEIKRPLSFC-ERGELIMEDYYREACSYNLGTKEIKK 352 (396)
Q Consensus 315 ~~~~~~~p~~~~-~~g~il~~~~~~~l~~yd~~t~~~~~ 352 (396)
.... ..-+++. .++..|++...+.++.++++++++++
T Consensus 254 ~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 254 TPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGLEH 291 (296)
T ss_dssp CSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBCCC
T ss_pred CCCC-ceeEEEECCCCCEEEEEcCCeEEEEEcccccccc
Confidence 3222 2334553 46666666667789999999998864
No 61
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=58.12 E-value=1e+02 Score=27.48 Aligned_cols=197 Identities=9% Similarity=-0.000 Sum_probs=92.7
Q ss_pred eeCceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 109 HCHGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 109 sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
+-+|.++....++.+.|||..|++........... .......+.|.|.. ++ +.... . .-.+.+++..+
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~--H~~~V~~v~~spdg-~~--l~sgs-~------d~~i~iwd~~~ 158 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYE--HDDIVSTVSVLSSG-TQ--AVSGS-K------DICIKVWDLAQ 158 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC--CSSCEEEEEECTTS-SE--EEEEE-T------TSCEEEEETTT
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccC--CCCCEEEEEECCCC-CE--EEEEe-C------CCeEEEEECCC
Confidence 44666666666779999999998766543321101 11234456666643 22 22221 1 14678888776
Q ss_pred Ccc-ccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCccc
Q 016018 189 DCW-RELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILNE 264 (396)
Q Consensus 189 ~~W-r~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~ 264 (396)
+.= +....+ . .....+.+ +|.-..++... ...|..+|+++.+-. .+..+..
T Consensus 159 ~~~~~~~~~h-------~----~~V~~~~~~~~~~~~l~s~s~-----------D~~v~iwd~~~~~~~~~~~~~~~--- 213 (344)
T 4gqb_B 159 QVVLSSYRAH-------A----AQVTCVAASPHKDSVFLSCSE-----------DNRILLWDTRCPKPASQIGCSAP--- 213 (344)
T ss_dssp TEEEEEECCC-------S----SCEEEEEECSSCTTEEEEEET-----------TSCEEEEETTSSSCEEECC-------
T ss_pred CcEEEEEcCc-------C----CceEEEEecCCCCCceeeecc-----------ccccccccccccceeeeeeccee---
Confidence 521 111110 0 00011111 22111122111 236888898876542 3332221
Q ss_pred cccccceEEEe--cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCC-cEEEE-ecCCeE
Q 016018 265 IDQEFSKLTVL--NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERG-ELIME-DYYREA 340 (396)
Q Consensus 265 ~~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g-~il~~-~~~~~l 340 (396)
......+... ++.+.+.+... .. +.||-++.. ....++........-+++..+| .+|.. ..++.+
T Consensus 214 -~~~~~~~~~~p~~~~~l~sg~~d--g~--v~~wd~~~~------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 214 -GYLPTSLAWHPQQSEVFVFGDEN--GT--VSLVDTKST------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETT--SE--EEEEESCC--------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred -eccceeeeecCCCCcceEEeccC--Cc--EEEEECCCC------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 1111122222 34444433322 44 999977642 1223333222222345666666 44443 457889
Q ss_pred EEEECCCCcEEEE
Q 016018 341 CSYNLGTKEIKKL 353 (396)
Q Consensus 341 ~~yd~~t~~~~~~ 353 (396)
..||.+++++..+
T Consensus 283 ~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 283 AVLDSSLSELFRS 295 (344)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEEECCCCcEEEE
Confidence 9999999976543
No 62
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=58.09 E-value=90 Score=31.14 Aligned_cols=118 Identities=13% Similarity=0.144 Sum_probs=62.1
Q ss_pred ceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCC--ceeeeecCCCCcccc-----ccccceEEEecCeeEEEEee
Q 016018 213 ECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSD--EVFQKLPVPNILNEI-----DQEFSKLTVLNESLAFVLRD 285 (396)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--e~~~~i~lP~~~~~~-----~~~~~~l~~~~g~L~~~~~~ 285 (396)
.++..+|.+|...... .|.++|..+ +.|+. +++...... ......++..+|++++....
T Consensus 61 ~P~v~~g~vyv~~~~~-------------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 126 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSWS-------------RVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD 126 (668)
T ss_dssp CCEEETTEEEEEEGGG-------------EEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT
T ss_pred CCEEECCEEEEECCCC-------------eEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcCC
Confidence 4788999999876554 799999865 45543 222210000 00112345567777654321
Q ss_pred cCCCccEEEEEEEccCCCCCCeEEEEEecC-CCC-cceeEEEEeCCcEEEEec------CCeEEEEECCCCcEEEE
Q 016018 286 KYRKSYEIQIWVMDEFGANEIWKKLFTTEP-FCE-IKRPLSFCERGELIMEDY------YREACSYNLGTKEIKKL 353 (396)
Q Consensus 286 ~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~-~~~-~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~~~~ 353 (396)
. .|..++-...+..|+....-.. ... ...|+. .++.+++... ++.++.||.+|++..+-
T Consensus 127 ---g----~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 127 ---G----RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp ---S----EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ---C----EEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 1 3445552212456776431100 001 124433 3455544322 36899999999987664
No 63
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=58.03 E-value=1.2e+02 Score=28.05 Aligned_cols=111 Identities=10% Similarity=0.072 Sum_probs=61.2
Q ss_pred cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEE
Q 016018 218 RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWV 297 (396)
Q Consensus 218 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~ 297 (396)
+|.+||..... ..|..+|+.+.+...+..... .. . ....-+|...++..... . -.||.
T Consensus 141 ~g~lyv~d~~~------------~~I~~id~~~g~~~~~~~~~~----~~-~-ia~~~~g~~l~~~d~~~-~---~~I~~ 198 (409)
T 3hrp_A 141 NNTVLAYQRDD------------PRVRLISVDDNKVTTVHPGFK----GG-K-PAVTKDKQRVYSIGWEG-T---HTVYV 198 (409)
T ss_dssp TTEEEEEETTT------------TEEEEEETTTTEEEEEEETCC----BC-B-CEECTTSSEEEEEBSST-T---CEEEE
T ss_pred CCCEEEEecCC------------CcEEEEECCCCEEEEeeccCC----CC-c-eeEecCCCcEEEEecCC-C---ceEEE
Confidence 68899876543 479999999877765532210 11 1 11223444333333321 1 25677
Q ss_pred EccCCCCCCeE--EEEEecC-CCCcceeEEEEe-CCcEEEEecCCeEEEEECCCCcEEEE
Q 016018 298 MDEFGANEIWK--KLFTTEP-FCEIKRPLSFCE-RGELIMEDYYREACSYNLGTKEIKKL 353 (396)
Q Consensus 298 l~~~~~~~~W~--~~~~i~~-~~~~~~p~~~~~-~g~il~~~~~~~l~~yd~~t~~~~~~ 353 (396)
++..+ .|. ..-.+.. ......-+++.. +|.|++....+.++.||++++..+.+
T Consensus 199 ~d~~~---~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 199 YMKAS---GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEGGG---TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred EEcCC---CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 76532 343 2212212 111223466776 67888865567899999999886655
No 64
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=57.02 E-value=85 Score=26.19 Aligned_cols=204 Identities=9% Similarity=-0.049 Sum_probs=93.9
Q ss_pred EEeeeCceEEEeEcCCcEEEEcchh-hhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEE
Q 016018 106 LVGHCHGIVCFALLSGRVVLANPAI-REFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVY 184 (396)
Q Consensus 106 ~~~sc~GLlc~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evy 184 (396)
+.-|-+|-.++...++.+++||..+ ++...+...... .....+.+.|.. ++ ++... .... ....+.++
T Consensus 47 ~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg-~~-l~~~~-~~~~---~~~~l~~~ 115 (297)
T 2ojh_A 47 PNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT-----ICNNDHGISPDG-AL-YAISD-KVEF---GKSAIYLL 115 (297)
T ss_dssp EEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC-----CBCSCCEECTTS-SE-EEEEE-CTTT---SSCEEEEE
T ss_pred eEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc-----ccccceEECCCC-CE-EEEEE-eCCC---CcceEEEE
Confidence 3334456544444456899999999 877766533210 011223444432 22 22221 1111 12455556
Q ss_pred EcCCCccccccccccccccccccccCCcceEEEcce-EEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcc
Q 016018 185 TLSADCWRELVANIDFLGAGTRFLKDNFECQYFRGA-CYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILN 263 (396)
Q Consensus 185 s~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~ 263 (396)
+..++.-+.+... . .... ....-+|. +++..... ....|..+|+.+.+...+.....
T Consensus 116 ~~~~~~~~~~~~~----~-~~~~-----~~~spdg~~l~~~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~-- 173 (297)
T 2ojh_A 116 PSTGGTPRLMTKN----L-PSYW-----HGWSPDGKSFTYCGIRD----------QVFDIYSMDIDSGVETRLTHGEG-- 173 (297)
T ss_dssp ETTCCCCEECCSS----S-SEEE-----EEECTTSSEEEEEEEET----------TEEEEEEEETTTCCEEECCCSSS--
T ss_pred ECCCCceEEeecC----C-Cccc-----eEECCCCCEEEEEECCC----------CceEEEEEECCCCcceEcccCCC--
Confidence 6655554444320 0 0000 01111343 33222221 12367777777666554422210
Q ss_pred ccccccceEE-EecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEE-EecC----
Q 016018 264 EIDQEFSKLT-VLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIM-EDYY---- 337 (396)
Q Consensus 264 ~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~-~~~~---- 337 (396)
....+. .-+|+..++....+ .. +.||.++..+ .. ...+.........+.+..+|+.++ ...+
T Consensus 174 ----~~~~~~~s~dg~~l~~~~~~~-~~--~~i~~~~~~~--~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 174 ----RNDGPDYSPDGRWIYFNSSRT-GQ--MQIWRVRVDG--SS---VERITDSAYGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp ----CEEEEEECTTSSEEEEEECTT-SS--CEEEEEETTS--SC---EEECCCCSEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred ----ccccceECCCCCEEEEEecCC-CC--ccEEEECCCC--CC---cEEEecCCcccCCeEECCCCCEEEEEEcCCCCC
Confidence 111222 23566444444322 34 8999998432 11 122222111223355667776544 3332
Q ss_pred -------CeEEEEECCCCcEEEEe
Q 016018 338 -------REACSYNLGTKEIKKLP 354 (396)
Q Consensus 338 -------~~l~~yd~~t~~~~~~~ 354 (396)
..++.||+++++.+.+.
T Consensus 242 ~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp SCCSSEEEEEEEEETTSCSCEEEE
T ss_pred cccccCceEEEEEecCCCCceeee
Confidence 46999999998876554
No 65
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=56.77 E-value=60 Score=32.53 Aligned_cols=118 Identities=13% Similarity=0.066 Sum_probs=62.0
Q ss_pred ceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCc--eeeeecCCCCcccc-----ccccceEEEecCeeEEEEee
Q 016018 213 ECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDE--VFQKLPVPNILNEI-----DQEFSKLTVLNESLAFVLRD 285 (396)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e--~~~~i~lP~~~~~~-----~~~~~~l~~~~g~L~~~~~~ 285 (396)
.++..+|.+|...... .|.++|..+. .|+. +++...... +.....++..+|+|++....
T Consensus 72 ~P~v~~g~vyv~~~~~-------------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d 137 (677)
T 1kb0_A 72 TPVVVDGIMYVSASWS-------------VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD 137 (677)
T ss_dssp CCEEETTEEEEECGGG-------------CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT
T ss_pred CCEEECCEEEEECCCC-------------eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcCC
Confidence 4788999999876544 7999998764 4543 332210000 01112345567776654221
Q ss_pred cCCCccEEEEEEEccCCCCCCeEEEEEecCC--CC-cceeEEEEeCCcEEEEec------CCeEEEEECCCCcEEEE
Q 016018 286 KYRKSYEIQIWVMDEFGANEIWKKLFTTEPF--CE-IKRPLSFCERGELIMEDY------YREACSYNLGTKEIKKL 353 (396)
Q Consensus 286 ~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~--~~-~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~~~~ 353 (396)
. .|..|+-...+..|+........ .. ...|+. .++.+++... ++.++.||.+|++..+-
T Consensus 138 ---g----~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 138 ---G----RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ---S----EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ---C----EEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 1 24445532124567654210100 11 123443 3455555432 47899999999987663
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=55.48 E-value=1.1e+02 Score=27.04 Aligned_cols=56 Identities=11% Similarity=0.003 Sum_probs=32.1
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEEEEECCCCcE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREACSYNLGTKEI 350 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~ 350 (396)
+.||-++... ........+........-+.+..+|.++....++.++.|+.....+
T Consensus 229 i~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~ 284 (377)
T 3dwl_C 229 VTIAYPSAPE--QPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGW 284 (377)
T ss_dssp EC-CEECSTT--SCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---
T ss_pred EEEEECCCCC--CcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCce
Confidence 9999998642 2222233333222223446677889888887777788888875543
No 67
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=55.21 E-value=1.5e+02 Score=28.52 Aligned_cols=106 Identities=11% Similarity=0.033 Sum_probs=62.2
Q ss_pred cEEEEEeCCCceeee-ecCCCCccccccccceEEEec-CeeEEEEeecCCCccEEEEEEEccCCC-CCCeEEEEEecCCC
Q 016018 241 DFIFSFDMSDEVFQK-LPVPNILNEIDQEFSKLTVLN-ESLAFVLRDKYRKSYEIQIWVMDEFGA-NEIWKKLFTTEPFC 317 (396)
Q Consensus 241 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~l~~~~-g~L~~~~~~~~~~~~~~~IW~l~~~~~-~~~W~~~~~i~~~~ 317 (396)
..|..+|+.+.+... ++.... .+......+..-+ |.+.+ ......++ +.||-++..+. ...|..+.++....
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~--ph~g~g~~~~~p~~g~~~~-s~~~~d~~--V~v~d~~~~~~~~~~~~~v~~l~~~g 420 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKT--PHPGRGANFVHPKYGPVWS-TSHLGDGS--ISLIGTDPKNHPQYAWKKVAELQGQG 420 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSS--BCCTTCEEEEETTTEEEEE-EEBSSSSE--EEEEECCTTTCTTTBTSEEEEEECSC
T ss_pred CeEEEEECCCCeEEEeeccCCC--CCCCCCcccCCCCCccEEE-eccCCCce--EEEEEeCCCCCchhcCeEEEEEEcCC
Confidence 478889998876543 343211 1111111222223 55543 33223356 99999885321 23499999887543
Q ss_pred CcceeEEEEeCCcEEEEec--------CCeEEEEECCCCcEE
Q 016018 318 EIKRPLSFCERGELIMEDY--------YREACSYNLGTKEIK 351 (396)
Q Consensus 318 ~~~~p~~~~~~g~il~~~~--------~~~l~~yd~~t~~~~ 351 (396)
.-..-+.++.+|..|.... ++.+..||.++.+..
T Consensus 421 ~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 421 GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 2223466788888777754 458999999988753
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=53.59 E-value=1.1e+02 Score=26.54 Aligned_cols=29 Identities=3% Similarity=-0.012 Sum_probs=20.7
Q ss_pred EEEEeCCcEEEE-ecCCeEEEEECCCCcEE
Q 016018 323 LSFCERGELIME-DYYREACSYNLGTKEIK 351 (396)
Q Consensus 323 ~~~~~~g~il~~-~~~~~l~~yd~~t~~~~ 351 (396)
+++..++..++. ..++.+..||+++++..
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 556667765555 45778999999987653
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=53.31 E-value=1.2e+02 Score=26.95 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=50.6
Q ss_pred cEEEEEeCCCceee-eecCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC
Q 016018 241 DFIFSFDMSDEVFQ-KLPVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE 318 (396)
Q Consensus 241 ~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~ 318 (396)
..|..+|+.+.+.. .+.... .....+.. -+|.+.+.+... .. +.||-++... ....+.....
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~~d--~~--i~i~d~~~~~------~~~~~~~~~~ 290 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHH------GPISVLEFNDTNKLLLSASDD--GT--LRIWHGGNGN------SQNCFYGHSQ 290 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCS------SCEEEEEEETTTTEEEEEETT--SC--EEEECSSSBS------CSEEECCCSS
T ss_pred CeEEEEEcCCCceeeeeccCC------CceEEEEECCCCCEEEEEcCC--CE--EEEEECCCCc------cceEecCCCc
Confidence 36889999876432 222111 11122332 245544444322 44 9999877521 1222322222
Q ss_pred cceeEEEEeCCcEEEEecCCeEEEEECCCCcEEE
Q 016018 319 IKRPLSFCERGELIMEDYYREACSYNLGTKEIKK 352 (396)
Q Consensus 319 ~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~~~ 352 (396)
...-+.+..++.++....++.+..||+++++...
T Consensus 291 ~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 291 SIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp CEEEEEEETTTEEEEEETTSEEEEEETTTTEEEE
T ss_pred cEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeE
Confidence 2234566667744444567889999998887543
No 70
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=51.68 E-value=1.3e+02 Score=26.72 Aligned_cols=191 Identities=13% Similarity=0.064 Sum_probs=95.7
Q ss_pred EEeeeCc-eEEEeE-cCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEE
Q 016018 106 LVGHCHG-IVCFAL-LSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEV 183 (396)
Q Consensus 106 ~~~sc~G-Llc~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ev 183 (396)
+.-+-+| .|.+.. .++.+.+||+.|++....-... . ...++.++|..+ + ++... . ..-.+.+
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-----~--~v~~~~~spdg~-~-l~~~~-~------~~~~v~v 100 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-----S--SPQGVAVSPDGK-Q-VYVTN-M------ASSTLSV 100 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-----S--SEEEEEECTTSS-E-EEEEE-T------TTTEEEE
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-----C--CccceEECCCCC-E-EEEEE-C------CCCEEEE
Confidence 3334455 444444 4568999999988765532221 1 234566666433 2 22221 1 1256888
Q ss_pred EEcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeee-ecCCC
Q 016018 184 YTLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQK-LPVPN 260 (396)
Q Consensus 184 ys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~ 260 (396)
|+..++.-...-. .. .. ...+.+ +|...+++... ...|..+|+.+.+... +....
T Consensus 101 ~d~~~~~~~~~~~----~~--~~-----~~~~~~s~dg~~l~~~~~~-----------~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 101 IDTTSNTVAGTVK----TG--KS-----PLGLALSPDGKKLYVTNNG-----------DKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp EETTTTEEEEEEE----CS--SS-----EEEEEECTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEEECCS
T ss_pred EECCCCeEEEEEe----CC--CC-----cceEEECCCCCEEEEEeCC-----------CCEEEEEECCCCcEEEEEecCC
Confidence 8888764322111 00 00 012222 45433333222 2478999998776543 23221
Q ss_pred CccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe----
Q 016018 261 ILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED---- 335 (396)
Q Consensus 261 ~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~---- 335 (396)
.. ..+.. -+|+..++.... ... +.+|-++. ......+... ....-+++..+|+.++..
T Consensus 159 -----~~--~~~~~~~dg~~l~~~~~~-~~~--v~~~d~~~------~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 159 -----SP--KGIAVTPDGTKVYVANFD-SMS--ISVIDTVT------NSVIDTVKVE-AAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp -----SE--EEEEECTTSSEEEEEETT-TTE--EEEEETTT------TEEEEEEECS-SEEEEEEECTTSSEEEEEEECS
T ss_pred -----Cc--ceEEECCCCCEEEEEeCC-CCE--EEEEECCC------CeEEEEEecC-CCccceEECCCCCEEEEEecCc
Confidence 11 12222 345544333332 244 88887764 2333444332 122335566777655553
Q ss_pred cCCeEEEEECCCCcEE
Q 016018 336 YYREACSYNLGTKEIK 351 (396)
Q Consensus 336 ~~~~l~~yd~~t~~~~ 351 (396)
.++.+..||+++++..
T Consensus 222 ~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SCCEEEEEETTTTEEE
T ss_pred CCCcEEEEECCCCeEE
Confidence 3578999999988653
No 71
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=50.56 E-value=1.5e+02 Score=27.13 Aligned_cols=184 Identities=8% Similarity=0.016 Sum_probs=91.8
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccccccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDF 200 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~ 200 (396)
..+++||..|++...+...+. ....+.+.|.. ++ ++... ..+ ....+.+++..++..+.+....
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-------~~~~~~~spdg-~~-la~~~-~~~----g~~~i~~~d~~~~~~~~l~~~~-- 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-------HNGAPAFSPDG-SK-LAFAL-SKT----GSLNLYVMDLASGQIRQVTDGR-- 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-------CEEEEEECTTS-SE-EEEEE-CTT----SSCEEEEEETTTCCEEECCCCS--
T ss_pred cEEEEEECCCCcEEEeecCCC-------cccCEEEcCCC-CE-EEEEE-ecC----CCceEEEEECCCCCEEeCcCCC--
Confidence 389999999998876643321 23455666643 22 22222 111 1256778888887665544210
Q ss_pred cccccccccCCcceEEE--cce-EEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEE-Eec
Q 016018 201 LGAGTRFLKDNFECQYF--RGA-CYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLT-VLN 276 (396)
Q Consensus 201 ~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~-~~~ 276 (396)
.. ...+.+ +|. ++...... ....|..+|+.+.+...+..... ....+. .-+
T Consensus 267 -----~~----~~~~~~spdg~~l~~~s~~~----------g~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~spd 321 (415)
T 2hqs_A 267 -----SN----NTEPTWFPDSQNLAFTSDQA----------GRPQVYKVNINGGAPQRITWEGS------QNQDADVSSD 321 (415)
T ss_dssp -----SC----EEEEEECTTSSEEEEEECTT----------SSCEEEEEETTSSCCEECCCSSS------EEEEEEECTT
T ss_pred -----Cc----ccceEECCCCCEEEEEECCC----------CCcEEEEEECCCCCEEEEecCCC------cccCeEECCC
Confidence 00 011111 454 44333222 12478888998876554432220 111122 235
Q ss_pred CeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEE-EecCC---eEEEEECCCCcEEE
Q 016018 277 ESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIM-EDYYR---EACSYNLGTKEIKK 352 (396)
Q Consensus 277 g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~-~~~~~---~l~~yd~~t~~~~~ 352 (396)
|+..++..... ....+.+|-++. .... .+... .....+.+..+|..|+ ...++ .++.+|++++..+.
T Consensus 322 G~~l~~~~~~~-g~~~i~~~d~~~----~~~~---~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 322 GKFMVMVSSNG-GQQHIAKQDLAT----GGVQ---VLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp SSEEEEEEECS-SCEEEEEEETTT----CCEE---ECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred CCEEEEEECcC-CceEEEEEECCC----CCEE---EecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEE
Confidence 66444443322 221255555543 2221 22221 1233456677887544 44333 79999999988887
Q ss_pred Ee
Q 016018 353 LP 354 (396)
Q Consensus 353 ~~ 354 (396)
+.
T Consensus 393 l~ 394 (415)
T 2hqs_A 393 LP 394 (415)
T ss_dssp CC
T ss_pred ee
Confidence 65
No 72
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=49.55 E-value=1.5e+02 Score=26.66 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=38.6
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEEEEECCCCcEEEEe
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREACSYNLGTKEIKKLP 354 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~~~~~ 354 (396)
-.||+.+- ...+...+|+... ..-+++..+|+.++..+.+.+..||.++++++.+.
T Consensus 286 ~~v~viD~----~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 286 AEIWVMDT----KTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR 341 (361)
T ss_dssp SEEEEEET----TTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE
T ss_pred ceEEEEEC----CCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE
Confidence 35666663 2346677776543 45577888998777766688999999999545443
No 73
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=49.22 E-value=1.3e+02 Score=25.95 Aligned_cols=31 Identities=13% Similarity=0.135 Sum_probs=17.7
Q ss_pred EEEEeCCcEEEEecCCeEEEEECCCCcEEEE
Q 016018 323 LSFCERGELIMEDYYREACSYNLGTKEIKKL 353 (396)
Q Consensus 323 ~~~~~~g~il~~~~~~~l~~yd~~t~~~~~~ 353 (396)
+....+|.|++...++.++.||..++.+...
T Consensus 220 ~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 220 PAISEDGTIYVTSLDGHLYAINPDGTEKWRF 250 (330)
T ss_dssp CEECTTSCEEEEETTTEEEEECTTSCEEEEE
T ss_pred eEECCCCeEEEEcCCCeEEEECCCCCEeEEe
Confidence 3444555666655556677777655554433
No 74
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=48.93 E-value=1.3e+02 Score=25.82 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=61.8
Q ss_pred ccEEEEEeCCCcee-eeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC
Q 016018 240 GDFIFSFDMSDEVF-QKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE 318 (396)
Q Consensus 240 ~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~ 318 (396)
...|..+|+++.+- +.+++|... .. ..++..+++|+++.... + .+|+.+- ..-.++.+|+...
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~--fg---eGi~~~~~~ly~ltw~~--~----~v~v~D~----~tl~~~~ti~~~~- 105 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPY--FG---AGIVAWRDRLIQLTWRN--H----EGFVYDL----ATLTPRARFRYPG- 105 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTC--CE---EEEEEETTEEEEEESSS--S----EEEEEET----TTTEEEEEEECSS-
T ss_pred CceEEEEECCCCCEEEEEeCCCCc--ce---eEEEEeCCEEEEEEeeC--C----EEEEEEC----CcCcEEEEEeCCC-
Confidence 35899999988765 567888621 11 23566788988875432 3 3666663 2356666776532
Q ss_pred cceeEEEEeCCc-EEEEecCCeEEEEECCCCcE-EEEee
Q 016018 319 IKRPLSFCERGE-LIMEDYYREACSYNLGTKEI-KKLPV 355 (396)
Q Consensus 319 ~~~p~~~~~~g~-il~~~~~~~l~~yd~~t~~~-~~~~~ 355 (396)
.+.++..+++ +++....+.+..+|++|.+. +.+.+
T Consensus 106 --~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 106 --EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp --CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred --CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 3345555554 55555566899999999765 44554
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=48.65 E-value=1.5e+02 Score=26.43 Aligned_cols=196 Identities=10% Similarity=-0.016 Sum_probs=85.0
Q ss_pred eeCceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 109 HCHGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 109 sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
+-+|-++....++.+.|||..+++........... .......+.|.|.. ++ +.... . .-.+.+++..+
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~--h~~~V~~v~~spdg-~~--l~sgs-~------dg~v~iwd~~~ 170 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKYE--HDDIVKTLSVFSDG-TQ--AVSGG-K------DFSVKVWDLSQ 170 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEECC--CSSCEEEEEECSSS-SE--EEEEE-T------TSCEEEEETTT
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccCC--CCCCEEEEEECCCC-CE--EEEEe-C------CCeEEEEECCC
Confidence 44666655666679999999998766544322111 11234456666543 22 22221 1 14578888776
Q ss_pred Ccccc-ccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeee-ecCCCCccc
Q 016018 189 DCWRE-LVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQK-LPVPNILNE 264 (396)
Q Consensus 189 ~~Wr~-~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~ 264 (396)
+.-.. .... .. ....+.+ +|.-+.++... ...|..+|+++.+... +....
T Consensus 171 ~~~~~~~~~h-------~~----~v~~v~~s~~~~~~~~s~~~-----------dg~v~~wd~~~~~~~~~~~~~~---- 224 (357)
T 4g56_B 171 KAVLKSYNAH-------SS----EVNCVAACPGKDTIFLSCGE-----------DGRILLWDTRKPKPATRIDFCA---- 224 (357)
T ss_dssp TEEEEEECCC-------SS----CEEEEEECTTCSSCEEEEET-----------TSCEEECCTTSSSCBCBCCCTT----
T ss_pred CcEEEEEcCC-------CC----CEEEEEEccCCCceeeeecc-----------CCceEEEECCCCceeeeeeecc----
Confidence 53211 1110 00 0012221 12111111111 1357788887754322 22222
Q ss_pred cccccceEEEe--cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCC-cEEEE-ecCCeE
Q 016018 265 IDQEFSKLTVL--NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERG-ELIME-DYYREA 340 (396)
Q Consensus 265 ~~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g-~il~~-~~~~~l 340 (396)
.......+.-. ++.+.+.+.. + .. +.||-++... ....+.....-..-+++..++ .+|.. ..++.+
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~-d-~~--i~~wd~~~~~------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDE-T-GN--VSLVNIKNPD------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEES-S-SC--EEEEESSCGG------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred ccccccchhhhhcccceEEEeec-c-cc--eeEEECCCCc------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 11111122222 3444433332 2 34 9999877421 122333222222335566555 44443 457789
Q ss_pred EEEECCCCcEEE
Q 016018 341 CSYNLGTKEIKK 352 (396)
Q Consensus 341 ~~yd~~t~~~~~ 352 (396)
..||++++++..
T Consensus 295 ~iwd~~~~~~~~ 306 (357)
T 4g56_B 295 AVLDADFSEVFR 306 (357)
T ss_dssp EEECTTSCEEEE
T ss_pred EEEECCCCcEeE
Confidence 999999987644
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=48.24 E-value=1.4e+02 Score=26.08 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=21.2
Q ss_pred eeEEEEeCCcEEEE-ecCCeEEEEECCCCcEE
Q 016018 321 RPLSFCERGELIME-DYYREACSYNLGTKEIK 351 (396)
Q Consensus 321 ~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~~ 351 (396)
.-+.+..++..++. ..++.+..||+++++..
T Consensus 206 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 206 HGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 33556667765555 45778999999877643
No 77
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=46.97 E-value=1.7e+02 Score=26.74 Aligned_cols=185 Identities=9% Similarity=0.050 Sum_probs=92.3
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccccccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDF 200 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~ 200 (396)
+.+.+||..+++.+.|.... .....+.+.|..+ +++... ... ....+.+++..++.-+.+...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-------~~v~~~~~Spdg~--~la~~s-~~~----~~~~i~~~d~~tg~~~~l~~~--- 221 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-------QPLMSPAWSPDGS--KLAYVT-FES----GRSALVIQTLANGAVRQVASF--- 221 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-------SCEEEEEECTTSS--EEEEEE-CTT----SSCEEEEEETTTCCEEEEECC---
T ss_pred ceEEEEcCCCCCCEEEeCCC-------CcceeeEEcCCCC--EEEEEE-ecC----CCcEEEEEECCCCcEEEeecC---
Confidence 48999998876666654321 1234556666433 233222 111 125788999988766554421
Q ss_pred cccccccccCCcceEEE--cce-EEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEE-ec
Q 016018 201 LGAGTRFLKDNFECQYF--RGA-CYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTV-LN 276 (396)
Q Consensus 201 ~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~-~~ 276 (396)
. .. ...+.+ +|. +.+..... ....|..+|+.+.+...+.... . ....+.- -+
T Consensus 222 -~--~~-----~~~~~~spdg~~la~~~~~~----------g~~~i~~~d~~~~~~~~l~~~~-----~-~~~~~~~spd 277 (415)
T 2hqs_A 222 -P--RH-----NGAPAFSPDGSKLAFALSKT----------GSLNLYVMDLASGQIRQVTDGR-----S-NNTEPTWFPD 277 (415)
T ss_dssp -S--SC-----EEEEEECTTSSEEEEEECTT----------SSCEEEEEETTTCCEEECCCCS-----S-CEEEEEECTT
T ss_pred -C--Cc-----ccCEEEcCCCCEEEEEEecC----------CCceEEEEECCCCCEEeCcCCC-----C-cccceEECCC
Confidence 0 00 011111 454 44333222 1246899999887665442211 0 1112222 35
Q ss_pred CeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecC---CeEEEEECCCCcEEE
Q 016018 277 ESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYY---REACSYNLGTKEIKK 352 (396)
Q Consensus 277 g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~---~~l~~yd~~t~~~~~ 352 (396)
|+..++....+ .. ..||.++-.+ .. ...+.........+.+..+|+.++. ..+ ..+..+|+++++.+.
T Consensus 278 g~~l~~~s~~~-g~--~~i~~~d~~~--~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~ 349 (415)
T 2hqs_A 278 SQNLAFTSDQA-GR--PQVYKVNING--GA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV 349 (415)
T ss_dssp SSEEEEEECTT-SS--CEEEEEETTS--SC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE
T ss_pred CCEEEEEECCC-CC--cEEEEEECCC--CC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE
Confidence 66444443322 33 5677776432 11 1222221122233566677865544 332 479999999998865
Q ss_pred Ee
Q 016018 353 LP 354 (396)
Q Consensus 353 ~~ 354 (396)
+.
T Consensus 350 l~ 351 (415)
T 2hqs_A 350 LS 351 (415)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 78
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=46.63 E-value=1.5e+02 Score=26.01 Aligned_cols=195 Identities=6% Similarity=-0.047 Sum_probs=99.3
Q ss_pred eCceEEEeE-cCCcEEEEcchhhhh-ccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcC
Q 016018 110 CHGIVCFAL-LSGRVVLANPAIREF-RHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLS 187 (396)
Q Consensus 110 c~GLlc~~~-~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~ 187 (396)
.++.+.+.. .++.+.|+|+.|++. .++|.... ..++.+++. . ++...... .-.+.+++..
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~--------p~~i~~~~~--g-~lyv~~~~-------~~~v~~iD~~ 113 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS--------PRYIHFLSD--E-KAYVTQIW-------DYRIFIINPK 113 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS--------EEEEEEEET--T-EEEEEEBS-------CSEEEEEETT
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC--------CcEEEEeCC--C-eEEEEECC-------CCeEEEEECC
Confidence 456554444 456899999999887 45653321 234555544 3 45443211 2567788887
Q ss_pred CCccc-cccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCcccc
Q 016018 188 ADCWR-ELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILNEI 265 (396)
Q Consensus 188 t~~Wr-~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~ 265 (396)
++.-. .++. ............-+.-+|.+|-..... ...|..+|+++.+.. .++.... ..
T Consensus 114 t~~~~~~i~~-----g~~~~~~~~p~~i~~~~~~lyv~~~~~-----------~~~v~viD~~t~~~~~~i~~g~~--p~ 175 (328)
T 3dsm_A 114 TYEITGYIEC-----PDMDMESGSTEQMVQYGKYVYVNCWSY-----------QNRILKIDTETDKVVDELTIGIQ--PT 175 (328)
T ss_dssp TTEEEEEEEC-----TTCCTTTCBCCCEEEETTEEEEEECTT-----------CCEEEEEETTTTEEEEEEECSSC--BC
T ss_pred CCeEEEEEEc-----CCccccCCCcceEEEECCEEEEEcCCC-----------CCEEEEEECCCCeEEEEEEcCCC--cc
Confidence 76422 1221 000000001111223566776654321 247999999987653 4554331 11
Q ss_pred ccccceEEEecCeeEEEEeecCCC------ccEEEEEEEccCCCCCCeEEEEEecCCC-CcceeEEEEeCCcEEEEecCC
Q 016018 266 DQEFSKLTVLNESLAFVLRDKYRK------SYEIQIWVMDEFGANEIWKKLFTTEPFC-EIKRPLSFCERGELIMEDYYR 338 (396)
Q Consensus 266 ~~~~~~l~~~~g~L~~~~~~~~~~------~~~~~IW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~~g~il~~~~~~ 338 (396)
.....-+|++.+++...... . -.|++++.. ..+-. .++.... ....-+++..+++.++..+.
T Consensus 176 ----~i~~~~dG~l~v~~~~~~~~~~~~~~~--~~v~~id~~--t~~v~--~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 176 ----SLVMDKYNKMWTITDGGYEGSPYGYEA--PSLYRIDAE--TFTVE--KQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp ----CCEECTTSEEEEEBCCBCTTCSSCBCC--CEEEEEETT--TTEEE--EEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred ----ceEEcCCCCEEEEECCCccCCccccCC--ceEEEEECC--CCeEE--EEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 11223468877766532110 1 235555532 12233 3343221 12344667766766666544
Q ss_pred eEEEEECCCCcEE
Q 016018 339 EACSYNLGTKEIK 351 (396)
Q Consensus 339 ~l~~yd~~t~~~~ 351 (396)
.++.+|.+++++.
T Consensus 245 ~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 245 DIWRMPVEADRVP 257 (328)
T ss_dssp SEEEEETTCSSCC
T ss_pred EEEEEECCCCcee
Confidence 8999999998763
No 79
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=45.66 E-value=1.3e+02 Score=30.20 Aligned_cols=118 Identities=11% Similarity=0.073 Sum_probs=62.3
Q ss_pred ceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCC--ceeeeecCCCCcccc-----ccccceEEEecCeeEEEEee
Q 016018 213 ECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSD--EVFQKLPVPNILNEI-----DQEFSKLTVLNESLAFVLRD 285 (396)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--e~~~~i~lP~~~~~~-----~~~~~~l~~~~g~L~~~~~~ 285 (396)
.++..+|.+|...... .|.++|..+ +.|+. +.+...... ......++..+|+|++....
T Consensus 65 ~P~v~~g~vyv~~~~~-------------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d 130 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPFS-------------VVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD 130 (689)
T ss_dssp CCEEETTEEEEECGGG-------------CEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT
T ss_pred cCEEECCEEEEEcCCC-------------eEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEccC
Confidence 4788999999876544 699999865 45553 322210000 01112345567776654321
Q ss_pred cCCCccEEEEEEEccCCCCCCeEEEEEecCCC--C-cceeEEEEeCCcEEEEec------CCeEEEEECCCCcEEEE
Q 016018 286 KYRKSYEIQIWVMDEFGANEIWKKLFTTEPFC--E-IKRPLSFCERGELIMEDY------YREACSYNLGTKEIKKL 353 (396)
Q Consensus 286 ~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~--~-~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~~~~~ 353 (396)
. .|..++-...+..|+......... . ...|+. .+|.+++... ++.++.||.+|++..+-
T Consensus 131 ---g----~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 131 ---G----RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp ---S----EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ---C----EEEEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 2 244454321245677654211111 1 134543 3555555322 46899999999987653
No 80
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=45.38 E-value=1.7e+02 Score=26.33 Aligned_cols=100 Identities=9% Similarity=0.060 Sum_probs=53.4
Q ss_pred EEEEEeCCCceeeee-cCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCc
Q 016018 242 FIFSFDMSDEVFQKL-PVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEI 319 (396)
Q Consensus 242 ~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~ 319 (396)
.|..+|+.+.+.... +.+. ..........+.. -+|.+.+.+... .. +.+|-++.. ....++......
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~s~~~d--~~--v~~~d~~~~------~~~~~~~~~~~~ 213 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEK-YKKKLGFVETISIPEHNELWVSQMQA--NA--VHVFDLKTL------AYKATVDLTGKW 213 (433)
T ss_dssp SEEEEETTTCCEEEECCCHH-HHTTCCEEEEEEEGGGTEEEEEEGGG--TE--EEEEETTTC------CEEEEEECSSSS
T ss_pred eEEEEECCCCeEeeecCccc-ccccCCceeEEEEcCCCEEEEEECCC--CE--EEEEECCCc------eEEEEEcCCCCC
Confidence 588999987765433 2211 0001111112222 356665554432 44 899988642 122333322222
Q ss_pred ceeEEEEeCCcEEEE-e-cCCeEEEEECCCCcEEE
Q 016018 320 KRPLSFCERGELIME-D-YYREACSYNLGTKEIKK 352 (396)
Q Consensus 320 ~~p~~~~~~g~il~~-~-~~~~l~~yd~~t~~~~~ 352 (396)
..-+++..+|..++. . .++.+..||+++++...
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 344667777776654 3 36789999999887643
No 81
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=44.87 E-value=1.4e+02 Score=25.11 Aligned_cols=187 Identities=10% Similarity=-0.015 Sum_probs=92.1
Q ss_pred EEeeeCceEEEeEc-CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEE
Q 016018 106 LVGHCHGIVCFALL-SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVY 184 (396)
Q Consensus 106 ~~~sc~GLlc~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evy 184 (396)
+....+|-+.+... .+.++++||. ++...++.+.. .....++.+|+..+ +.... . . .-.+.+|
T Consensus 109 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-----~~~~~~i~~d~~g~---l~v~~-~-~-----~~~i~~~ 172 (300)
T 2qc5_A 109 ITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK-----GSYPAFITLGSDNA---LWFTE-N-Q-----NNSIGRI 172 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSST-----TCCEEEEEECTTSS---EEEEE-T-T-----TTEEEEE
T ss_pred ceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCC-----CCCceeEEECCCCC---EEEEe-c-C-----CCeEEEE
Confidence 33344777766654 4578889987 66554432210 11345667776533 22221 1 0 1345666
Q ss_pred EcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCc
Q 016018 185 TLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNIL 262 (396)
Q Consensus 185 s~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~ 262 (396)
+. ++....... + .. ... ..++.+ +|.+|+..... ..|..+|. +.++..+.+|...
T Consensus 173 ~~-~g~~~~~~~-----~--~~-~~~-~~~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 173 TN-TGKLEEYPL-----P--TN-AAA-PVGITSGNDGALWFVEIMG------------NKIGRITT-TGEISEYDIPTPN 229 (300)
T ss_dssp CT-TCCEEEEEC-----S--ST-TCC-EEEEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSSTT
T ss_pred CC-CCcEEEeeC-----C--CC-CCC-cceEEECCCCCEEEEccCC------------CEEEEEcC-CCcEEEEECCCCC
Confidence 66 444443321 0 00 011 124444 47776644332 47999999 5666666666421
Q ss_pred cccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEE
Q 016018 263 NEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREAC 341 (396)
Q Consensus 263 ~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~ 341 (396)
. ....+.. -+|.|.+.... ... +.+ ++.. .... .+.++........+.+..+|.|++.... .++
T Consensus 230 ---~-~~~~i~~d~~g~l~v~~~~--~~~--i~~--~~~~---g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~ 294 (300)
T 2qc5_A 230 ---A-RPHAITAGKNSEIWFTEWG--ANQ--IGR--ITND---NTIQ-EYQLQTENAEPHGITFGKDGSVWFALKC-KIG 294 (300)
T ss_dssp ---C-CEEEEEECSTTCEEEEETT--TTE--EEE--ECTT---SCEE-EEECCSTTCCCCCEEECTTSCEEEECSS-EEE
T ss_pred ---C-CceEEEECCCCCEEEeccC--CCe--EEE--ECCC---CcEE-EEECCccCCccceeEeCCCCCEEEEccC-ceE
Confidence 1 1123333 36776654432 233 443 3321 2222 2333211111233566677888887664 899
Q ss_pred EEECC
Q 016018 342 SYNLG 346 (396)
Q Consensus 342 ~yd~~ 346 (396)
.||++
T Consensus 295 ~~~p~ 299 (300)
T 2qc5_A 295 KLNLN 299 (300)
T ss_dssp EEEEC
T ss_pred EeCCC
Confidence 99875
No 82
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=44.73 E-value=1.6e+02 Score=25.69 Aligned_cols=95 Identities=8% Similarity=-0.092 Sum_probs=57.1
Q ss_pred EEEEEeCCCcee-eeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcc
Q 016018 242 FIFSFDMSDEVF-QKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIK 320 (396)
Q Consensus 242 ~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~ 320 (396)
.|..+|+++.+- +.+ +|+.. .. ..+...+++|+++.... + .+|+.+- .+-.++.+|+...
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~~~--Fg---eGit~~g~~Ly~ltw~~--~----~v~V~D~----~Tl~~~~ti~~~~--- 136 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLGNI--FA---EGLASDGERLYQLTWTE--G----LLFTWSG----MPPQRERTTRYSG--- 136 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECTTC--CE---EEEEECSSCEEEEESSS--C----EEEEEET----TTTEEEEEEECSS---
T ss_pred EEEEEECCCCcEEeEE-CCCCc--ce---eEEEEeCCEEEEEEccC--C----EEEEEEC----CcCcEEEEEeCCC---
Confidence 499999998765 445 66521 10 23566788888775432 2 4666663 2345666676532
Q ss_pred eeEEEEeCCcEE-EEecCCeEEEEECCCCcEE-EEee
Q 016018 321 RPLSFCERGELI-MEDYYREACSYNLGTKEIK-KLPV 355 (396)
Q Consensus 321 ~p~~~~~~g~il-~~~~~~~l~~yd~~t~~~~-~~~~ 355 (396)
...++..+|+.| +....+.+..+|++|.++. .+.+
T Consensus 137 eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 137 EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 233444455544 4444678999999997654 4554
No 83
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=44.12 E-value=1.5e+02 Score=25.29 Aligned_cols=189 Identities=11% Similarity=0.053 Sum_probs=92.1
Q ss_pred eeCc-eEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcC
Q 016018 109 HCHG-IVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLS 187 (396)
Q Consensus 109 sc~G-Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~ 187 (396)
+.+| +|+....++.+.+||..+++.......... ......+.+.|.. ++ +.... . .-.+.+|+..
T Consensus 106 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~----~~~i~~~~~~~~~-~~--l~~~~-~------dg~v~~~d~~ 171 (337)
T 1gxr_A 106 LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS----APACYALAISPDS-KV--CFSCC-S------DGNIAVWDLH 171 (337)
T ss_dssp CTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS----SSCEEEEEECTTS-SE--EEEEE-T------TSCEEEEETT
T ss_pred cCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC----CCceEEEEECCCC-CE--EEEEe-C------CCcEEEEeCC
Confidence 3355 344445566899999988764332221111 1123455666532 22 22221 1 1457888887
Q ss_pred CCcccc-ccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCcc
Q 016018 188 ADCWRE-LVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILN 263 (396)
Q Consensus 188 t~~Wr~-~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~ 263 (396)
++.-.. ... . .. ....+.+ +|........ ...|..+|+.+.+-. .+..+..
T Consensus 172 ~~~~~~~~~~-----~--~~----~i~~~~~~~~~~~l~~~~~------------dg~i~~~d~~~~~~~~~~~~~~~-- 226 (337)
T 1gxr_A 172 NQTLVRQFQG-----H--TD----GASCIDISNDGTKLWTGGL------------DNTVRSWDLREGRQLQQHDFTSQ-- 226 (337)
T ss_dssp TTEEEEEECC-----C--SS----CEEEEEECTTSSEEEEEET------------TSEEEEEETTTTEEEEEEECSSC--
T ss_pred CCceeeeeec-----c--cC----ceEEEEECCCCCEEEEEec------------CCcEEEEECCCCceEeeecCCCc--
Confidence 653221 110 0 00 0012222 3433332222 237888998876543 2332221
Q ss_pred ccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecCCeEE
Q 016018 264 EIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYYREAC 341 (396)
Q Consensus 264 ~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~~~l~ 341 (396)
...+.. -+|...+++... .. +.+|-++... ...+........-+.+..++..++. ..++.+.
T Consensus 227 -----v~~~~~s~~~~~l~~~~~~--~~--i~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 227 -----IFSLGYCPTGEWLAVGMES--SN--VEVLHVNKPD-------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp -----EEEEEECTTSSEEEEEETT--SC--EEEEETTSSC-------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred -----eEEEEECCCCCEEEEEcCC--Cc--EEEEECCCCC-------eEEEcCCccceeEEEECCCCCEEEEecCCCcEE
Confidence 112222 245554444332 44 9999887531 1223222222334566677776655 4577899
Q ss_pred EEECCCCcEEE
Q 016018 342 SYNLGTKEIKK 352 (396)
Q Consensus 342 ~yd~~t~~~~~ 352 (396)
.||+++++...
T Consensus 291 ~~~~~~~~~~~ 301 (337)
T 1gxr_A 291 AWRTPYGASIF 301 (337)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCCeEEE
Confidence 99999987654
No 84
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=43.76 E-value=1.5e+02 Score=29.11 Aligned_cols=118 Identities=12% Similarity=0.048 Sum_probs=59.5
Q ss_pred ceEEEcceEEEEEe-ccCCcccccCCCCccEEEEEeC-CC--ceeeeecCCCCcccc-----ccccceEEE--ecCe---
Q 016018 213 ECQYFRGACYWILW-DKSVGINYNNLVNGDFIFSFDM-SD--EVFQKLPVPNILNEI-----DQEFSKLTV--LNES--- 278 (396)
Q Consensus 213 ~~v~~~G~lywl~~-~~~~~~~~~~~~~~~~il~fD~-~~--e~~~~i~lP~~~~~~-----~~~~~~l~~--~~g~--- 278 (396)
.++..+|.+|.... +. .|.++|. .+ +.|+. +++...... +.....++. .+|+
T Consensus 57 tP~v~~g~vyv~~~~~~-------------~v~AlD~~~tG~~lW~~-~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~ 122 (599)
T 1w6s_A 57 APLVVDGKMYIHTSFPN-------------NTFALGLDDPGTILWQD-KPKQNPAARAVACCDLVNRGLAYWPGDGKTPA 122 (599)
T ss_dssp CCEEETTEEEEECSTTT-------------CEEEEETTCTTSEEEEE-CCCCCGGGGGGCSSCSCCCCCEEECCCSSSCC
T ss_pred ccEEECCEEEEEeCCCC-------------EEEEEeCCCCCcEEEEE-CCCCCccccccccccccccceEEEecCCccee
Confidence 47889999998765 33 6999998 54 34543 322210000 000112344 4555
Q ss_pred -eEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEe-cCC-CCcceeEEEEeCCcEEEEec------CCeEEEEECCCCc
Q 016018 279 -LAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTT-EPF-CEIKRPLSFCERGELIMEDY------YREACSYNLGTKE 349 (396)
Q Consensus 279 -L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i-~~~-~~~~~p~~~~~~g~il~~~~------~~~l~~yd~~t~~ 349 (396)
|++.... -.+..|+-...+..|+....- ... .....|+.. +|.+++-.. ++.++.||.+|++
T Consensus 123 rV~v~t~d-------g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 123 LILKTQLD-------GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp EEEEECTT-------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred EEEEEcCC-------CEEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCc
Confidence 5443211 134455532124557654210 000 112345442 455544332 5789999999998
Q ss_pred EEEE
Q 016018 350 IKKL 353 (396)
Q Consensus 350 ~~~~ 353 (396)
..+-
T Consensus 194 ~~W~ 197 (599)
T 1w6s_A 194 QVWR 197 (599)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=43.04 E-value=96 Score=33.18 Aligned_cols=184 Identities=10% Similarity=0.053 Sum_probs=87.9
Q ss_pred eEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccc
Q 016018 113 IVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWR 192 (396)
Q Consensus 113 Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr 192 (396)
++.....++.+.+||..+++......... ....++.+.|.. ++ +.... ..-.+.+|+..++...
T Consensus 975 ~l~~g~~~g~i~i~d~~~~~~~~~~~~h~------~~v~~l~~s~dg-~~--l~s~~-------~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 975 YVAFGDEDGAIKIIELPNNRVFSSGVGHK------KAVRHIQFTADG-KT--LISSS-------EDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp EEEEEETTSCCEEEETTTTSCEEECCCCS------SCCCCEEECSSS-SC--EEEEC-------SSSBEEEEETTTTEEE
T ss_pred EEEEEcCCCCEEEEEcCCCceeeecccCC------CceEEEEECCCC-CE--EEEEc-------CCCEEEEEECCCCceE
Confidence 44445556688899988776544322111 112234455442 22 22211 1256888888887655
Q ss_pred cccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCccccccccce
Q 016018 193 ELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILNEIDQEFSK 271 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~ 271 (396)
....... ..... ...-+|.+.-...+ ..|..+|+.+.+.. .+..... ....
T Consensus 1039 ~~~~~~~----~v~~~-----~~~~~~~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~~~------~v~~ 1090 (1249)
T 3sfz_A 1039 FLQAHQE----TVKDF-----RLLQDSRLLSWSFD-------------GTVKVWNVITGRIERDFTCHQG------TVLS 1090 (1249)
T ss_dssp CCBCCSS----CEEEE-----EECSSSEEEEEESS-------------SEEEEEETTTTCCCEEEECCSS------CCCC
T ss_pred EEecCCC----cEEEE-----EEcCCCcEEEEECC-------------CcEEEEECCCCceeEEEcccCC------cEEE
Confidence 4332100 00000 11113333222222 36888898776542 2222210 1112
Q ss_pred EE-EecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-cCCeEEEEECCCCc
Q 016018 272 LT-VLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-YYREACSYNLGTKE 349 (396)
Q Consensus 272 l~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~~~~l~~yd~~t~~ 349 (396)
+. .-+|++.+.+... .+ +.||-++... ....+........-+++..+|.++... .++.+..||+++++
T Consensus 1091 ~~~s~d~~~l~s~s~d--~~--v~iwd~~~~~------~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1091 CAISSDATKFSSTSAD--KT--AKIWSFDLLS------PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp EEECSSSSSCEEECCS--SC--CCEECSSSSS------CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred EEECCCCCEEEEEcCC--Cc--EEEEECCCcc------eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 22 2345544433332 44 8899877532 111121111222345677788776664 46789999999876
Q ss_pred E
Q 016018 350 I 350 (396)
Q Consensus 350 ~ 350 (396)
.
T Consensus 1161 ~ 1161 (1249)
T 3sfz_A 1161 L 1161 (1249)
T ss_dssp C
T ss_pred e
Confidence 4
No 86
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=42.91 E-value=1.8e+02 Score=25.81 Aligned_cols=191 Identities=5% Similarity=-0.086 Sum_probs=90.7
Q ss_pred eeCceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 109 HCHGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 109 sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
+-+|.++....++.+.+|+..+++....-... ......+.+.|... + +.... . .-.+.+|+..+
T Consensus 215 ~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~-~--l~~~~-~------d~~i~i~d~~~ 278 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH------HGPISVLEFNDTNK-L--LLSAS-D------DGTLRIWHGGN 278 (425)
T ss_dssp EETTEEEEECGGGCEEEEETTCSSCSEEECCC------SSCEEEEEEETTTT-E--EEEEE-T------TSCEEEECSSS
T ss_pred cCCCEEEEEcCCCeEEEEEcCCCceeeeeccC------CCceEEEEECCCCC-E--EEEEc-C------CCEEEEEECCC
Confidence 34677666666678999999887544322111 12244566676543 2 22221 1 14577887766
Q ss_pred CccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeee-ecCCCCcccccc
Q 016018 189 DCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQK-LPVPNILNEIDQ 267 (396)
Q Consensus 189 ~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~ 267 (396)
+.-...-. .... ....-...-+| +.++... ...|..+|+.+.+... +.....
T Consensus 279 ~~~~~~~~------~~~~--~i~~~~~~~~~--~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~------ 331 (425)
T 1r5m_A 279 GNSQNCFY------GHSQ--SIVSASWVGDD--KVISCSM-----------DGSVRLWSLKQNTLLALSIVDGV------ 331 (425)
T ss_dssp BSCSEEEC------CCSS--CEEEEEEETTT--EEEEEET-----------TSEEEEEETTTTEEEEEEECTTC------
T ss_pred CccceEec------CCCc--cEEEEEECCCC--EEEEEeC-----------CCcEEEEECCCCcEeEecccCCc------
Confidence 43221110 0000 00000111245 2222222 2478999998765432 232210
Q ss_pred ccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCC---------CC-----CeEEEEEecCCCC--cceeEEEEeCCc
Q 016018 268 EFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGA---------NE-----IWKKLFTTEPFCE--IKRPLSFCERGE 330 (396)
Q Consensus 268 ~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~---------~~-----~W~~~~~i~~~~~--~~~p~~~~~~g~ 330 (396)
....+.. -+|.+.+++... .. +.||-++.... .. .+.....+..... ...-+.+..++.
T Consensus 332 ~i~~~~~s~~~~~l~~~~~d--g~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 407 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMD--GQ--VNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN 407 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT--SC--EEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS
T ss_pred cEEEEEEcCCCCEEEEEECC--Ce--EEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc
Confidence 1112222 245554444432 34 99999885310 00 1113444443211 233456667776
Q ss_pred EEEE-ecCCeEEEEECC
Q 016018 331 LIME-DYYREACSYNLG 346 (396)
Q Consensus 331 il~~-~~~~~l~~yd~~ 346 (396)
.|+. ..++.+..||++
T Consensus 408 ~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 408 KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEEESSSCCEEEECC
T ss_pred eEEEEecCceEEEEeec
Confidence 5544 557789999886
No 87
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=42.90 E-value=1.5e+02 Score=24.90 Aligned_cols=195 Identities=11% Similarity=0.061 Sum_probs=98.4
Q ss_pred eEEEeeeCceEEEeEc-CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEE
Q 016018 104 YKLVGHCHGIVCFALL-SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVE 182 (396)
Q Consensus 104 ~~~~~sc~GLlc~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~e 182 (396)
..+....+|-+.+... .+.+.++||. ++...++.+.. .....++.+|+... +.... . ..-.+.
T Consensus 23 ~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~-----~~~~~~i~~~~~g~---l~v~~---~----~~~~v~ 86 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP-----DAKVMCLIVSSLGD---IWFTE---N----GANKIG 86 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-----TCCEEEEEECTTSC---EEEEE---T----TTTEEE
T ss_pred ceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC-----CCcceeEEECCCCC---EEEEe---c----CCCeEE
Confidence 3444455777766663 4589999998 77666543211 12344666665432 22211 1 013466
Q ss_pred EEEcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCC
Q 016018 183 VYTLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPN 260 (396)
Q Consensus 183 vys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~ 260 (396)
+|+.. +.++.... + ... ....++.+ +|.+|...... ..|..+|.. .+...+.+|.
T Consensus 87 ~~d~~-g~~~~~~~-----~--~~~--~~~~~i~~~~~g~l~v~~~~~------------~~i~~~~~~-g~~~~~~~~~ 143 (300)
T 2qc5_A 87 KLSKK-GGFTEYPL-----P--QPD--SGPYGITEGLNGDIWFTQLNG------------DRIGKLTAD-GTIYEYDLPN 143 (300)
T ss_dssp EECTT-SCEEEEEC-----S--STT--CCEEEEEECSTTCEEEEETTT------------TEEEEECTT-SCEEEEECSS
T ss_pred EECCC-CCeEEecC-----C--CCC--CCCccceECCCCCEEEEccCC------------CeEEEECCC-CCEEEccCCC
Confidence 66665 55543321 0 000 01123443 57776544322 379999998 6666666664
Q ss_pred CccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCccee--EEEEeCCcEEEEec-
Q 016018 261 ILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRP--LSFCERGELIMEDY- 336 (396)
Q Consensus 261 ~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~il~~~~- 336 (396)
.. . ....++. -+|+|.+.... .. .|+.++.. ..... +..+ .....| +++..+|.+++...
T Consensus 144 ~~---~-~~~~i~~d~~g~l~v~~~~--~~----~i~~~~~~---g~~~~-~~~~--~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 144 KG---S-YPAFITLGSDNALWFTENQ--NN----SIGRITNT---GKLEE-YPLP--TNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp TT---C-CEEEEEECTTSSEEEEETT--TT----EEEEECTT---CCEEE-EECS--STTCCEEEEEECTTSSEEEEETT
T ss_pred CC---C-CceeEEECCCCCEEEEecC--CC----eEEEECCC---CcEEE-eeCC--CCCCCcceEEECCCCCEEEEccC
Confidence 11 1 1123333 45776554332 12 35555542 23332 2221 122234 44556778887764
Q ss_pred CCeEEEEECCCCcEEEEe
Q 016018 337 YREACSYNLGTKEIKKLP 354 (396)
Q Consensus 337 ~~~l~~yd~~t~~~~~~~ 354 (396)
.+.+..||. ++++..+.
T Consensus 208 ~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 208 GNKIGRITT-TGEISEYD 224 (300)
T ss_dssp TTEEEEECT-TCCEEEEE
T ss_pred CCEEEEEcC-CCcEEEEE
Confidence 457999999 55665543
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=42.54 E-value=1.8e+02 Score=25.68 Aligned_cols=63 Identities=8% Similarity=-0.018 Sum_probs=36.2
Q ss_pred eEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCC
Q 016018 113 IVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSAD 189 (396)
Q Consensus 113 Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~ 189 (396)
+++....++.+.|||..+++....-... .....+.+.+...+-+++.... . .-.+.+|+..++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~------~~~v~~~d~~~~ 176 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFE-------ETVYSHHMSPVSTKHCLVAVGT-R------GPKVQLCDLKSG 176 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECS-------SCEEEEEECSSCSSCCEEEEEE-S------SSSEEEEESSSS
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCC-------CceeeeEeecCCCCCcEEEEEc-C------CCeEEEEeCCCc
Confidence 5555555678999999887765543221 1234455555544433444432 1 156888888765
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=42.41 E-value=2.7e+02 Score=27.71 Aligned_cols=192 Identities=12% Similarity=0.039 Sum_probs=92.5
Q ss_pred eeCc-eEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcC
Q 016018 109 HCHG-IVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLS 187 (396)
Q Consensus 109 sc~G-Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~ 187 (396)
+.+| +|.....++.+.|||..|++....-... ......+.+.|... + ++ ... . .-.+.+|+..
T Consensus 64 s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~s~~~~-~-l~-~~~-~------dg~i~vw~~~ 127 (814)
T 3mkq_A 64 IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH------PDYIRSIAVHPTKP-Y-VL-SGS-D------DLTVKLWNWE 127 (814)
T ss_dssp EGGGTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSS-E-EE-EEE-T------TSEEEEEEGG
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCcEEEEEecC------CCCEEEEEEeCCCC-E-EE-EEc-C------CCEEEEEECC
Confidence 4455 4455555679999999888654422111 11234556665432 2 22 221 1 2568888876
Q ss_pred CCccccccccccccccccccccCCcceEEE---cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeee-ecCCCCcc
Q 016018 188 ADCWRELVANIDFLGAGTRFLKDNFECQYF---RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQK-LPVPNILN 263 (396)
Q Consensus 188 t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~ 263 (396)
++ |..... +.. . ......+.+ +|........ ...|..+|+.+.+... +.....
T Consensus 128 ~~-~~~~~~----~~~-~---~~~v~~~~~~p~~~~~l~~~~~------------dg~v~vwd~~~~~~~~~~~~~~~-- 184 (814)
T 3mkq_A 128 NN-WALEQT----FEG-H---EHFVMCVAFNPKDPSTFASGCL------------DRTVKVWSLGQSTPNFTLTTGQE-- 184 (814)
T ss_dssp GT-SEEEEE----EEC-C---SSCEEEEEEETTEEEEEEEEET------------TSEEEEEETTCSSCSEEEECCCT--
T ss_pred CC-ceEEEE----EcC-C---CCcEEEEEEEcCCCCEEEEEeC------------CCeEEEEECCCCcceeEEecCCC--
Confidence 54 221111 000 0 000112222 3333332222 2378888987654322 222210
Q ss_pred ccccccceEEEe---cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-cCCe
Q 016018 264 EIDQEFSKLTVL---NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-YYRE 339 (396)
Q Consensus 264 ~~~~~~~~l~~~---~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~~~~ 339 (396)
. ....+... +|.+.+++... .. +.+|-++. ......+.....-...+.+..+|.+++.. .++.
T Consensus 185 -~--~v~~~~~~~~~~~~~l~~~~~d--g~--i~~~d~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 251 (814)
T 3mkq_A 185 -R--GVNYVDYYPLPDKPYMITASDD--LT--IKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251 (814)
T ss_dssp -T--CCCEEEECCSTTCCEEEEECTT--SE--EEEEETTT------TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred -C--CEEEEEEEECCCCCEEEEEeCC--CE--EEEEECCC------CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe
Confidence 0 11122222 55554444332 34 99997764 12334443222222345666777766654 4678
Q ss_pred EEEEECCCCcEEE
Q 016018 340 ACSYNLGTKEIKK 352 (396)
Q Consensus 340 l~~yd~~t~~~~~ 352 (396)
+..||+.+++...
T Consensus 252 v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 252 LKIWNSSTYKVEK 264 (814)
T ss_dssp EEEEETTTCSEEE
T ss_pred EEEEECCCCcEEE
Confidence 9999999876543
No 90
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=42.19 E-value=1.6e+02 Score=24.97 Aligned_cols=67 Identities=12% Similarity=0.123 Sum_probs=39.1
Q ss_pred eeCceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 109 HCHGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 109 sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
|.+|+|.... ++.+.|||..|++...+-....+ ......+.+.|.. ++ +..+. . .-.+.+++..+
T Consensus 34 S~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~----~~~V~~v~~~~~~-~~--l~sgs-~------Dg~v~iw~~~~ 98 (318)
T 4ggc_A 34 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP----GEYISSVAWIKEG-NY--LAVGT-S------SAEVQLWDVQQ 98 (318)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST----TCCEEEEEECTTS-SE--EEEEE-T------TSEEEEEETTT
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC----CCeEEEEEECCCC-CE--EEEEE-C------CCcEEEeecCC
Confidence 6678776544 55899999999987664332211 1234456666643 33 22221 1 25678888876
Q ss_pred Cc
Q 016018 189 DC 190 (396)
Q Consensus 189 ~~ 190 (396)
+.
T Consensus 99 ~~ 100 (318)
T 4ggc_A 99 QK 100 (318)
T ss_dssp TE
T ss_pred ce
Confidence 53
No 91
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=41.90 E-value=2.8e+02 Score=27.81 Aligned_cols=146 Identities=10% Similarity=0.029 Sum_probs=73.2
Q ss_pred ceEEEEEcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeee
Q 016018 179 LKVEVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKL 256 (396)
Q Consensus 179 ~~~evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i 256 (396)
..+..|+..++.|+..... . ...........+.. +|.+ |+.... ..|..||..++++..+
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~----~-~~~~~~~~i~~i~~d~~g~l-Wigt~~------------~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDT----S-NSQLLENFVRSIAQDSEGRF-WIGTFG------------GGVGIYTPDMQLVRKF 530 (781)
T ss_dssp TEEEEEESSSSSCCEEECT----T-TSSCSCSCEEEEEECTTCCE-EEEESS------------SCEEEECTTCCEEEEE
T ss_pred CceEEEeCCCCeEEecccC----c-ccccccceeEEEEEcCCCCE-EEEEcC------------CCEEEEeCCCCeEEEc
Confidence 4677888888888765421 0 00000011123333 3554 555442 2689999999998877
Q ss_pred cCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEec--CCCCcceeEEEEeCCcEEE
Q 016018 257 PVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTE--PFCEIKRPLSFCERGELIM 333 (396)
Q Consensus 257 ~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~--~~~~~~~p~~~~~~g~il~ 333 (396)
..+... .......+.+ .+|.|.+... .. + |..++.. ...+.. +... +......-+....+|.|.+
T Consensus 531 ~~~~~l--~~~~i~~i~~d~~g~lWi~T~----~G--l-v~~~d~~--~~~~~~-~~~~~gl~~~~i~~i~~d~~g~lW~ 598 (781)
T 3v9f_A 531 NQYEGF--CSNTINQIYRSSKGQMWLATG----EG--L-VCFPSAR--NFDYQV-FQRKEGLPNTHIRAISEDKNGNIWA 598 (781)
T ss_dssp CTTTTC--SCSCEEEEEECTTSCEEEEET----TE--E-EEESCTT--TCCCEE-ECGGGTCSCCCCCEEEECSSSCEEE
T ss_pred cCCCCC--CCCeeEEEEECCCCCEEEEEC----CC--c-eEEECCC--CCcEEE-ccccCCCCCceEEEEEECCCCCEEE
Confidence 544321 1111223333 4566655332 12 2 1223321 222322 2111 1111122344556678877
Q ss_pred EecCCeEEEEECCCCcEEEEee
Q 016018 334 EDYYREACSYNLGTKEIKKLPV 355 (396)
Q Consensus 334 ~~~~~~l~~yd~~t~~~~~~~~ 355 (396)
.. .+.+..||+++++++....
T Consensus 599 ~t-~~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 599 ST-NTGISCYITSKKCFYTYDH 619 (781)
T ss_dssp EC-SSCEEEEETTTTEEEEECG
T ss_pred Ec-CCceEEEECCCCceEEecc
Confidence 65 5569999999998887653
No 92
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=41.74 E-value=1.5e+02 Score=24.58 Aligned_cols=106 Identities=12% Similarity=0.186 Sum_probs=56.8
Q ss_pred cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEE
Q 016018 218 RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIW 296 (396)
Q Consensus 218 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW 296 (396)
+|.+|+... . ..|..||..+.....+..+.. . ....++. -+|+|.+..... .. +.+|
T Consensus 77 ~g~l~v~~~-~------------~~i~~~d~~~~~~~~~~~~~~----~-~p~~i~~~~~g~l~v~~~~~--~~--i~~~ 134 (270)
T 1rwi_B 77 AGTVYVTDF-N------------NRVVTLAAGSNNQTVLPFDGL----N-YPEGLAVDTQGAVYVADRGN--NR--VVKL 134 (270)
T ss_dssp TCCEEEEET-T------------TEEEEECTTCSCCEECCCCSC----S-SEEEEEECTTCCEEEEEGGG--TE--EEEE
T ss_pred CCCEEEEcC-C------------CEEEEEeCCCceEeeeecCCc----C-CCcceEECCCCCEEEEECCC--CE--EEEE
Confidence 577776544 2 379999998876655443321 1 1123333 367766544322 23 5555
Q ss_pred EEccCCCCCCeEEEEEecCCCCc--ceeEEEEeCCcEEEEec-CCeEEEEECCCCcEEEE
Q 016018 297 VMDEFGANEIWKKLFTTEPFCEI--KRPLSFCERGELIMEDY-YREACSYNLGTKEIKKL 353 (396)
Q Consensus 297 ~l~~~~~~~~W~~~~~i~~~~~~--~~p~~~~~~g~il~~~~-~~~l~~yd~~t~~~~~~ 353 (396)
+. + ...... . ..... ..-+++..+|.+++... .+.+..||.+++.....
T Consensus 135 --~~-~-~~~~~~---~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 135 --AA-G-SKTQTV---L-PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL 186 (270)
T ss_dssp --CT-T-CCSCEE---C-CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC
T ss_pred --EC-C-CceeEe---e-ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEee
Confidence 32 2 111111 1 11111 23366667788777654 46899999998876543
No 93
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=41.74 E-value=1.9e+02 Score=25.74 Aligned_cols=94 Identities=11% Similarity=0.100 Sum_probs=50.8
Q ss_pred EEEEEeCCCceeeeecCC-CCccccccccceEEEe--cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC
Q 016018 242 FIFSFDMSDEVFQKLPVP-NILNEIDQEFSKLTVL--NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE 318 (396)
Q Consensus 242 ~il~fD~~~e~~~~i~lP-~~~~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~ 318 (396)
.|..+|+.+..-....+. . .......+... +|.+.+.+... .. +.||-++.. .....+.....
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~l~s~~~d--g~--v~~wd~~~~------~~~~~~~~~~~ 306 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQG----HQKGILSLDWCHQDEHLLLSSGRD--NT--VLLWNPESA------EQLSQFPARGN 306 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSC----CSSCEEEEEECSSCSSCEEEEESS--SE--EEEECSSSC------CEEEEEECSSS
T ss_pred eEEEEeCCCCCCCcEEeecC----ccCceeEEEeCCCCCCeEEEEeCC--CC--EEEeeCCCC------ccceeecCCCC
Confidence 577888876432111222 1 11111233332 56655544432 44 999987642 33444443222
Q ss_pred cceeEEEEeCC-cEEEEe-cCCeEEEEECCCCc
Q 016018 319 IKRPLSFCERG-ELIMED-YYREACSYNLGTKE 349 (396)
Q Consensus 319 ~~~p~~~~~~g-~il~~~-~~~~l~~yd~~t~~ 349 (396)
...-+.+..++ .+++.. .++.+..||+++.+
T Consensus 307 ~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 307 WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred ceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 23346677777 666654 47789999998875
No 94
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=41.55 E-value=2.9e+02 Score=27.77 Aligned_cols=202 Identities=11% Similarity=0.064 Sum_probs=100.0
Q ss_pred eeeCceEEEeEcCCcEEEEcchhhhhccccccc----cCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEE
Q 016018 108 GHCHGIVCFALLSGRVVLANPAIREFRHLREHC----YHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEV 183 (396)
Q Consensus 108 ~sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~----~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ev 183 (396)
...+|-|-+....+.+..++|.++.+..+...+ ...+. .....++..|+... +.++.. .-.+..
T Consensus 320 ~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~i~~d~~g~----lWigt~-------~~Gl~~ 387 (781)
T 3v9f_A 320 QDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLS-NKVVSSVCDDGQGK----LWIGTD-------GGGINV 387 (781)
T ss_dssp ECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCS-SSCEEEEEECTTSC----EEEEEB-------SSCEEE
T ss_pred EeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCC-CcceEEEEEcCCCC----EEEEeC-------CCcEEE
Confidence 334566655554457888899888877764321 00111 12234555554321 333321 134666
Q ss_pred EEcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCC
Q 016018 184 YTLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNI 261 (396)
Q Consensus 184 ys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~ 261 (396)
|+..++.++.... + .........+++. +|.+ |+.... ..|..+|..++++..+..+.
T Consensus 388 ~~~~~~~~~~~~~-----~--~~~~~~~v~~i~~d~~g~l-Wigt~~------------~Gl~~~~~~~~~~~~~~~~~- 446 (781)
T 3v9f_A 388 FENGKRVAIYNKE-----N--RELLSNSVLCSLKDSEGNL-WFGTYL------------GNISYYNTRLKKFQIIELEK- 446 (781)
T ss_dssp EETTEEEEECC------------CCCSBEEEEEECTTSCE-EEEETT------------EEEEEECSSSCEEEECCSTT-
T ss_pred EECCCCeEEEccC-----C--CCCCCcceEEEEECCCCCE-EEEecc------------CCEEEEcCCCCcEEEeccCC-
Confidence 7766655544321 0 0000011123333 4554 444332 37999999999998775431
Q ss_pred ccccccccceEEEe-cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecC---CCCcceeEEEEeCCcEEEEecC
Q 016018 262 LNEIDQEFSKLTVL-NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEP---FCEIKRPLSFCERGELIMEDYY 337 (396)
Q Consensus 262 ~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~---~~~~~~p~~~~~~g~il~~~~~ 337 (396)
. .......+.+. +|.|.+... .. + +.++.. ...|........ .......+....+|.|.+....
T Consensus 447 ~--~~~~v~~i~~d~~g~lwigt~----~G--l--~~~~~~--~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~ 514 (781)
T 3v9f_A 447 N--ELLDVRVFYEDKNKKIWIGTH----AG--V--FVIDLA--SKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG 514 (781)
T ss_dssp T--CCCCEEEEEECTTSEEEEEET----TE--E--EEEESS--SSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS
T ss_pred C--CCCeEEEEEECCCCCEEEEEC----Cc--e--EEEeCC--CCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC
Confidence 0 11112234333 567665432 23 3 334321 245655443221 0112233445567788777665
Q ss_pred CeEEEEECCCCcEEEEe
Q 016018 338 REACSYNLGTKEIKKLP 354 (396)
Q Consensus 338 ~~l~~yd~~t~~~~~~~ 354 (396)
+.++.||.++++++.+.
T Consensus 515 ~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 515 GGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp SCEEEECTTCCEEEEEC
T ss_pred CCEEEEeCCCCeEEEcc
Confidence 67999999999887754
No 95
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=40.80 E-value=14 Score=22.51 Aligned_cols=17 Identities=29% Similarity=0.429 Sum_probs=12.7
Q ss_pred CCCCcHHHHHHHhhcCC
Q 016018 4 FSDLPEELVFKILVLLP 20 (396)
Q Consensus 4 ~~~LP~Dll~eIL~rLP 20 (396)
+..||.||-+|||+--.
T Consensus 21 F~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 21 FKQLPADIQEEILSGKS 37 (48)
T ss_dssp TTTSCHHHHHHHTTCCC
T ss_pred HHHCcHHHHHHHHhcch
Confidence 45788888888887543
No 96
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=40.73 E-value=1.9e+02 Score=25.49 Aligned_cols=52 Identities=6% Similarity=-0.059 Sum_probs=32.4
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-cCCeEEEEECCCCcE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-YYREACSYNLGTKEI 350 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~~~~l~~yd~~t~~~ 350 (396)
+.||-+... .....+........-+++..+|..++.. .++.+..||+++.+.
T Consensus 316 i~v~d~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 316 IAVYTVYSG------EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTTC------CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEECcCC------cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 999988752 2344444322223446777888776664 577899999999864
No 97
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=40.64 E-value=1.7e+02 Score=25.01 Aligned_cols=103 Identities=9% Similarity=0.021 Sum_probs=53.3
Q ss_pred EEEEEeCCCceeeeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC--c
Q 016018 242 FIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE--I 319 (396)
Q Consensus 242 ~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~--~ 319 (396)
.|..||.+.+.-..+..|.... . ...-...+|.+.+..... . -.|+.++..+ +..|+....-..... .
T Consensus 57 ~V~~~d~~G~~~W~~~~~~~~~-~---~~~~~~~dG~~lv~~~~~---~--~~v~~vd~~G-k~l~~~~~~~~~~~~~~~ 126 (276)
T 3no2_A 57 GAKMITRDGRELWNIAAPAGCE-M---QTARILPDGNALVAWCGH---P--STILEVNMKG-EVLSKTEFETGIERPHAQ 126 (276)
T ss_dssp EEEEECTTSCEEEEEECCTTCE-E---EEEEECTTSCEEEEEEST---T--EEEEEECTTS-CEEEEEEECCSCSSGGGS
T ss_pred CEEEECCCCCEEEEEcCCCCcc-c---cccEECCCCCEEEEecCC---C--CEEEEEeCCC-CEEEEEeccCCCCccccc
Confidence 6999999665555666653111 0 111122466665544321 2 4567776533 344554321111000 1
Q ss_pred ceeEEEEeCCcEEEEec-CCeEEEEECCCCcEEEEe
Q 016018 320 KRPLSFCERGELIMEDY-YREACSYNLGTKEIKKLP 354 (396)
Q Consensus 320 ~~p~~~~~~g~il~~~~-~~~l~~yd~~t~~~~~~~ 354 (396)
..-+....+|.+++... ++.++.||.+.+.+-.+.
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~ 162 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVK 162 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEE
Confidence 12234567788777654 568999999844443343
No 98
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=40.55 E-value=41 Score=25.45 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=28.3
Q ss_pred cEEEEcchhh-hhccccccccCCCCcceeEEEEEEecCCCCeEEEEEE
Q 016018 122 RVVLANPAIR-EFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRIL 168 (396)
Q Consensus 122 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~ 168 (396)
.+++.+|.|+ .|. |.... ...+.+-+|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~--p~g~~------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWV--PTSKH------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEE--ESCSS------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceE--eCCCC------ceEEEEEEcCCCCEEEEEEcc
Confidence 7899999996 884 43321 145667889888889998854
No 99
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=40.52 E-value=1.8e+02 Score=25.13 Aligned_cols=104 Identities=9% Similarity=0.021 Sum_probs=55.2
Q ss_pred cEEEEEeCCCcee-eeecCCCCccc--cccc-cceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecC
Q 016018 241 DFIFSFDMSDEVF-QKLPVPNILNE--IDQE-FSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEP 315 (396)
Q Consensus 241 ~~il~fD~~~e~~-~~i~lP~~~~~--~~~~-~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~ 315 (396)
..|..+|+.+.+. ..++++..... .... ...+.. -+|+..++........ +.+|-++. ......+..
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~--i~~~d~~~------~~~~~~~~~ 182 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESV--IWVVDGGN------IKLKTAIQN 182 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCE--EEEEETTT------TEEEEEECC
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCce--EEEEcCCC------CceEEEecC
Confidence 4799999987665 45565432110 0000 112332 3555444444332233 55554432 344555552
Q ss_pred CCCcceeEEEEeCCcEEEE-ecCCeEEEEECCCCcEEE
Q 016018 316 FCEIKRPLSFCERGELIME-DYYREACSYNLGTKEIKK 352 (396)
Q Consensus 316 ~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~~~ 352 (396)
.......+.+..+|+.++. ..++.+..||+++++...
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~ 220 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILS 220 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE
Confidence 2222344667777765544 456789999999987654
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=39.93 E-value=3.7e+02 Score=28.55 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=23.3
Q ss_pred EEEEeCCcEEEEecCCeEEEEECCCCcEEE
Q 016018 323 LSFCERGELIMEDYYREACSYNLGTKEIKK 352 (396)
Q Consensus 323 ~~~~~~g~il~~~~~~~l~~yd~~t~~~~~ 352 (396)
+.+..+|..++...++.+..||..++....
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~ 833 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLA 833 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCcee
Confidence 455678888877778899999999887644
No 101
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=39.01 E-value=1.9e+02 Score=24.97 Aligned_cols=201 Identities=10% Similarity=-0.023 Sum_probs=96.4
Q ss_pred CceEEEeEc-CCcEEEEcchhhhhcc-cccccc--CCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEc
Q 016018 111 HGIVCFALL-SGRVVLANPAIREFRH-LREHCY--HSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTL 186 (396)
Q Consensus 111 ~GLlc~~~~-~~~~~V~NP~T~~~~~-LP~~~~--~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~ 186 (396)
++.+.+... ++.+.++|+.|++... ++.... +.........++.++|..+ + ++... ... ...+.+++.
T Consensus 100 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~-l~~~~-~~~-----~~~i~~~d~ 171 (353)
T 3vgz_A 100 TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-T-VYISG-IGK-----ESVIWVVDG 171 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-E-EEEEE-ESS-----SCEEEEEET
T ss_pred CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-E-EEEEe-cCC-----CceEEEEcC
Confidence 344555544 4689999999987643 443211 1111112345677787644 2 22221 111 255778887
Q ss_pred CCCccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCcccc
Q 016018 187 SADCWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILNEI 265 (396)
Q Consensus 187 ~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~ 265 (396)
.++.= +.. ++. ...... .-.+.-+|...+..... ..|..+|+.+.+.. .++.+.. . .
T Consensus 172 ~~~~~--~~~----~~~-~~~~~~-~~~~s~dg~~l~~~~~~------------~~i~~~d~~~~~~~~~~~~~~~-~-~ 229 (353)
T 3vgz_A 172 GNIKL--KTA----IQN-TGKMST-GLALDSEGKRLYTTNAD------------GELITIDTADNKILSRKKLLDD-G-K 229 (353)
T ss_dssp TTTEE--EEE----ECC-CCTTCC-CCEEETTTTEEEEECTT------------SEEEEEETTTTEEEEEEECCCS-S-S
T ss_pred CCCce--EEE----ecC-CCCccc-eEEECCCCCEEEEEcCC------------CeEEEEECCCCeEEEEEEcCCC-C-C
Confidence 66532 111 010 000011 11233355533333222 37889999887654 4455331 0 1
Q ss_pred ccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCc-EEEEe-cCCeEEE
Q 016018 266 DQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGE-LIMED-YYREACS 342 (396)
Q Consensus 266 ~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-il~~~-~~~~l~~ 342 (396)
......+.. -+|+..++... .... +.+|-++. . .....+..... .-+.+..+|+ +++.. .++.+..
T Consensus 230 ~~~~~~~~~s~dg~~l~~~~~-~~~~--v~~~d~~~----~--~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~ 298 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFITDS-KAAE--VLVVDTRN----G--NILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSV 298 (353)
T ss_dssp CCCEEEEEEETTTTEEEEEES-SSSE--EEEEETTT----C--CEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEE
T ss_pred CcccceEEECCCCCEEEEEeC-CCCE--EEEEECCC----C--cEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEE
Confidence 111112332 34553333332 2234 77776543 2 22333333221 2367778887 44444 3678999
Q ss_pred EECCCCcEEE
Q 016018 343 YNLGTKEIKK 352 (396)
Q Consensus 343 yd~~t~~~~~ 352 (396)
||.++++...
T Consensus 299 ~d~~~~~~~~ 308 (353)
T 3vgz_A 299 IDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCeEEE
Confidence 9999987654
No 102
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=38.41 E-value=96 Score=26.58 Aligned_cols=114 Identities=11% Similarity=-0.023 Sum_probs=0.0
Q ss_pred cceEEEE--------EeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEEec-CeeEEEEeecCC
Q 016018 218 RGACYWI--------LWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTVLN-ESLAFVLRDKYR 288 (396)
Q Consensus 218 ~G~lywl--------~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~~~-g~L~~~~~~~~~ 288 (396)
+|.+|+. .... .|..+|..+.++..+..|...............-+ |+|.+.....
T Consensus 28 ~g~l~~~~~~~~~~~~~~~-------------~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-- 92 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAG-------------EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-- 92 (314)
T ss_dssp TSCEEEEETTCEETTEECC-------------EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--
T ss_pred CCCEEEEEeccccCCCCCC-------------EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--
Q ss_pred CccEEEEEEEccCCCCCCeE-EEEEecCCCCcceeEEEEeCCcEEEEecC----------------CeEEEEECCCCcEE
Q 016018 289 KSYEIQIWVMDEFGANEIWK-KLFTTEPFCEIKRPLSFCERGELIMEDYY----------------REACSYNLGTKEIK 351 (396)
Q Consensus 289 ~~~~~~IW~l~~~~~~~~W~-~~~~i~~~~~~~~p~~~~~~g~il~~~~~----------------~~l~~yd~~t~~~~ 351 (396)
. +.+|-.+ + +.... ....-........-+++..+|.+++.... ..++.||.+ ++.+
T Consensus 93 -~--l~~~d~~--g-~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 93 -G--LLVVQTD--G-TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp -E--EEEEETT--S-CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred -C--EEEEeCC--C-CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Q ss_pred EE
Q 016018 352 KL 353 (396)
Q Consensus 352 ~~ 353 (396)
.+
T Consensus 166 ~~ 167 (314)
T 1pjx_A 166 QV 167 (314)
T ss_dssp EE
T ss_pred Ee
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=38.26 E-value=2e+02 Score=24.89 Aligned_cols=70 Identities=7% Similarity=0.148 Sum_probs=40.7
Q ss_pred CeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecCCeEEEEECCCCcEEEEe
Q 016018 277 ESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYYREACSYNLGTKEIKKLP 354 (396)
Q Consensus 277 g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~~~~~ 354 (396)
|.+.+.+... .. +.||-++..+ ......+.....-..-+.+..++..++. ..++.+..||+++++...+.
T Consensus 54 g~~l~~~~~d--g~--i~iw~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 124 (368)
T 3mmy_A 54 GNFLIAGSWA--ND--VRCWEVQDSG----QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA 124 (368)
T ss_dssp SEEEEEEETT--SE--EEEEEECTTS----CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCC--Cc--EEEEEcCCCC----ceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec
Confidence 3554444432 44 9999998632 2222333222222234566677766655 45778999999998876543
No 104
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=37.61 E-value=2e+02 Score=24.72 Aligned_cols=194 Identities=9% Similarity=-0.046 Sum_probs=95.1
Q ss_pred CceEEEeE-cCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCC
Q 016018 111 HGIVCFAL-LSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSAD 189 (396)
Q Consensus 111 ~GLlc~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~ 189 (396)
.+.+.+.. .++.+.++|+.|++....-..+. . .. ++.++|..+ + ++... .. ...+.+++..++
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-----~-~~-~~~~s~dg~-~-l~~~~--~~-----~~~i~~~d~~~~ 72 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY-----D-FV-DTAITSDCS-N-VVVTS--DF-----CQTLVQIETQLE 72 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC-----C-EE-EEEECSSSC-E-EEEEE--ST-----TCEEEEEECSSS
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC-----C-cc-eEEEcCCCC-E-EEEEe--CC-----CCeEEEEECCCC
Confidence 34444444 34589999999988755322211 1 22 667776543 2 33222 11 147788888776
Q ss_pred cc--ccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCccccc
Q 016018 190 CW--RELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILNEID 266 (396)
Q Consensus 190 ~W--r~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~ 266 (396)
.- +.+.. . . .....-.+.-+|..-+ .... ......|..+|+.+.+.. .++....
T Consensus 73 ~~~~~~~~~-----~--~--~~~~~~~~s~dg~~l~-~~~~--------~~~~~~i~v~d~~~~~~~~~~~~~~~----- 129 (331)
T 3u4y_A 73 PPKVVAIQE-----G--Q--SSMADVDITPDDQFAV-TVTG--------LNHPFNMQSYSFLKNKFISTIPIPYD----- 129 (331)
T ss_dssp SCEEEEEEE-----C--S--SCCCCEEECTTSSEEE-ECCC--------SSSSCEEEEEETTTTEEEEEEECCTT-----
T ss_pred ceeEEeccc-----C--C--CCccceEECCCCCEEE-EecC--------CCCcccEEEEECCCCCeEEEEECCCC-----
Confidence 53 11211 0 0 0010002222354322 2222 011227999999876653 3343321
Q ss_pred cccceEE-EecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEE-EEEecCCCCcceeEEEEeCCc-EEEEe-cCCeEEE
Q 016018 267 QEFSKLT-VLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKK-LFTTEPFCEIKRPLSFCERGE-LIMED-YYREACS 342 (396)
Q Consensus 267 ~~~~~l~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~-~~~i~~~~~~~~p~~~~~~g~-il~~~-~~~~l~~ 342 (396)
. ..+. .-+|+..+++....... +.+|.++..+ ..... ...+... ....-+.+..+|+ +++.. .++.+..
T Consensus 130 ~--~~~~~spdg~~l~~~~~~~~~~--i~~~~~~~~g--~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~v~v 202 (331)
T 3u4y_A 130 A--VGIAISPNGNGLILIDRSSANT--VRRFKIDADG--VLFDTGQEFISGG-TRPFNITFTPDGNFAFVANLIGNSIGI 202 (331)
T ss_dssp E--EEEEECTTSSCEEEEEETTTTE--EEEEEECTTC--CEEEEEEEEECSS-SSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred c--cceEECCCCCEEEEEecCCCce--EEEEEECCCC--cEeecCCccccCC-CCccceEECCCCCEEEEEeCCCCeEEE
Confidence 1 1232 23565444444333343 8899998543 11111 1222221 1223466778887 44444 3568999
Q ss_pred EECCCCcE
Q 016018 343 YNLGTKEI 350 (396)
Q Consensus 343 yd~~t~~~ 350 (396)
||+++++.
T Consensus 203 ~d~~~~~~ 210 (331)
T 3u4y_A 203 LETQNPEN 210 (331)
T ss_dssp EECSSTTS
T ss_pred EECCCCcc
Confidence 99998774
No 105
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=36.11 E-value=2.2e+02 Score=24.85 Aligned_cols=94 Identities=11% Similarity=0.040 Sum_probs=51.1
Q ss_pred cEEEEEeCCCceeee-ecCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC
Q 016018 241 DFIFSFDMSDEVFQK-LPVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE 318 (396)
Q Consensus 241 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~ 318 (396)
..|..+|+.+.+... +.... .....+.. -+|.+.+.+... .. +.||-+... .....+.....
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~sg~~d--~~--v~~wd~~~~------~~~~~~~~h~~ 227 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHT------GDVMSLSLAPDTRLFVSGACD--AS--AKLWDVREG------MCRQTFTGHES 227 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCS------SCEEEEEECTTSSEEEEEETT--SC--EEEEETTTC------SEEEEECCCSS
T ss_pred CcEEEEECCCCcEEEEEcCCC------CceEEEEECCCCCEEEEEeCC--Cc--EEEEECCCC------eeEEEEcCCcC
Confidence 368888988765432 22111 11122322 245554444432 45 999987642 22333432222
Q ss_pred cceeEEEEeCCcEEEEe-cCCeEEEEECCCCcE
Q 016018 319 IKRPLSFCERGELIMED-YYREACSYNLGTKEI 350 (396)
Q Consensus 319 ~~~p~~~~~~g~il~~~-~~~~l~~yd~~t~~~ 350 (396)
...-+++..+|..++.. .++.+..||+++++.
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 22346667777766654 467899999988754
No 106
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=35.93 E-value=1.9e+02 Score=24.15 Aligned_cols=195 Identities=12% Similarity=0.020 Sum_probs=96.8
Q ss_pred EEEeeeCceEEEeEc-CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEE
Q 016018 105 KLVGHCHGIVCFALL-SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEV 183 (396)
Q Consensus 105 ~~~~sc~GLlc~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ev 183 (396)
.+....+|-+.+... .+.+.++||. ++...++.+.. .....++.+|+... +.... . . .-.+..
T Consensus 19 ~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~-----~~~~~~i~~~~~g~---l~v~~-~-~-----~~~i~~ 82 (299)
T 2z2n_A 19 GITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTP-----DAKVMCLTISSDGE---VWFTE-N-A-----ANKIGR 82 (299)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSST-----TCCEEEEEECTTSC---EEEEE-T-T-----TTEEEE
T ss_pred ceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcc-----cCceeeEEECCCCC---EEEeC-C-C-----CCeEEE
Confidence 444456777766664 4589999998 77766543211 12345666676432 22211 0 0 134555
Q ss_pred EEcCCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCC
Q 016018 184 YTLSADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNI 261 (396)
Q Consensus 184 ys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~ 261 (396)
|+.. +..+.... + ... .. ..++.+ +|.+|..... ...|..+|. +.+...+.+|..
T Consensus 83 ~~~~-g~~~~~~~-----~--~~~-~~-~~~i~~~~~g~l~v~~~~------------~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 83 ITKK-GIIKEYTL-----P--NPD-SA-PYGITEGPNGDIWFTEMN------------GNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp ECTT-SCEEEEEC-----S--STT-CC-EEEEEECTTSCEEEEETT------------TTEEEEECT-TCCEEEEECSST
T ss_pred ECCC-CcEEEEeC-----C--CcC-CC-ceeeEECCCCCEEEEecC------------CceEEEECC-CCCEEEecCCCC
Confidence 5543 33332221 0 000 01 123444 4766654322 247999999 666666665542
Q ss_pred ccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCccee--EEEEeCCcEEEEec-C
Q 016018 262 LNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRP--LSFCERGELIMEDY-Y 337 (396)
Q Consensus 262 ~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~il~~~~-~ 337 (396)
. . ....++. .+|.|.+.... .. .|+.++.. ..... ..+. .....| +++..+|.+++... .
T Consensus 140 ~---~-~~~~i~~~~~g~l~v~~~~--~~----~i~~~~~~---g~~~~-~~~~--~~~~~~~~i~~~~~g~l~v~~~~~ 203 (299)
T 2z2n_A 140 G---S-YPSFITLGSDNALWFTENQ--NN----AIGRITES---GDITE-FKIP--TPASGPVGITKGNDDALWFVEIIG 203 (299)
T ss_dssp T---C-CEEEEEECTTSCEEEEETT--TT----EEEEECTT---CCEEE-EECS--STTCCEEEEEECTTSSEEEEETTT
T ss_pred C---C-CCceEEEcCCCCEEEEeCC--CC----EEEEEcCC---CcEEE-eeCC--CCCCcceeEEECCCCCEEEEccCC
Confidence 1 1 1123333 35777654321 12 34555531 22332 2222 112233 45556778877654 5
Q ss_pred CeEEEEECCCCcEEEEee
Q 016018 338 REACSYNLGTKEIKKLPV 355 (396)
Q Consensus 338 ~~l~~yd~~t~~~~~~~~ 355 (396)
+.+..||. +++++.+..
T Consensus 204 ~~i~~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 204 NKIGRITT-SGEITEFKI 220 (299)
T ss_dssp TEEEEECT-TCCEEEEEC
T ss_pred ceEEEECC-CCcEEEEEC
Confidence 68999999 777766543
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=35.77 E-value=2e+02 Score=24.21 Aligned_cols=94 Identities=11% Similarity=0.080 Sum_probs=52.9
Q ss_pred cEEEEEeCCCcee-eeecCCCCccccccccceEEEe-cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC
Q 016018 241 DFIFSFDMSDEVF-QKLPVPNILNEIDQEFSKLTVL-NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE 318 (396)
Q Consensus 241 ~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~ 318 (396)
..|..+|+.+.+. ..+.... .....+... +|.| +.... ... +.||-++.. .....+.....
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~l--~~~~~-dg~--v~iwd~~~~------~~~~~~~~~~~ 267 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHE------SFVYCIKLLPNGDI--VSCGE-DRT--VRIWSKENG------SLKQVITLPAI 267 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCS------SCEEEEEECTTSCE--EEEET-TSE--EEEECTTTC------CEEEEEECSSS
T ss_pred CeEEEEECCchhhhhhhhcCC------ceEEEEEEecCCCE--EEEec-CCE--EEEEECCCC------ceeEEEeccCc
Confidence 3788999986543 2333221 111223332 4543 33332 244 999987752 22333332222
Q ss_pred cceeEEEEeCCcEEEEecCCeEEEEECCCCcEE
Q 016018 319 IKRPLSFCERGELIMEDYYREACSYNLGTKEIK 351 (396)
Q Consensus 319 ~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~~ 351 (396)
...-+.+..+|.++....++.+..||++++++.
T Consensus 268 ~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 268 SIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp CEEEEEECTTSCEEEEETTSCEEEEESCGGGCC
T ss_pred eEEEEEEccCCCEEEEeCCCcEEEEeCCCCcee
Confidence 223466677888777677889999999998764
No 108
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=35.06 E-value=2.8e+02 Score=25.82 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=45.2
Q ss_pred cCeeEEEEeecCCCc---cEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCc-EEEEec--CCeEEEEECCCCc
Q 016018 276 NESLAFVLRDKYRKS---YEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGE-LIMEDY--YREACSYNLGTKE 349 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~---~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-il~~~~--~~~l~~yd~~t~~ 349 (396)
+++|++........+ ..=+||+++- ..+....+|+... ...-+.+..+|+ .++..+ ++.+..||.++.+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 466666654321100 0147899984 4577777776432 123366778887 777654 5789999999998
Q ss_pred EEE
Q 016018 350 IKK 352 (396)
Q Consensus 350 ~~~ 352 (396)
+..
T Consensus 405 vv~ 407 (426)
T 3c75_H 405 ELR 407 (426)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 109
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=33.51 E-value=2.3e+02 Score=24.30 Aligned_cols=103 Identities=9% Similarity=0.101 Sum_probs=53.9
Q ss_pred ccEEEEEeCCCceeeeecCCCCccccccccceEEE-ecCeeEEEEeecC----CCccEEEEEEEccCCCCCCeEEEEEec
Q 016018 240 GDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTV-LNESLAFVLRDKY----RKSYEIQIWVMDEFGANEIWKKLFTTE 314 (396)
Q Consensus 240 ~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~----~~~~~~~IW~l~~~~~~~~W~~~~~i~ 314 (396)
...|..+|..+.++..+. .. ... ..++. -+|+..++..... ... +.+|-++. .. ......+.
T Consensus 168 ~~~v~~~d~~~g~~~~~~-~~--~~p----~gl~~spdg~~lyv~~~~~~~~~~~~--i~~~~~~~---~~-l~~~~~~~ 234 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA-DL--DHP----NGLAFSPDEQTLYVSQTPEQGHGSVE--ITAFAWRD---GA-LHDRRHFA 234 (305)
T ss_dssp CEEEEEECSSSCCCEEEE-EE--SSE----EEEEECTTSSEEEEEECCC---CCCE--EEEEEEET---TE-EEEEEEEE
T ss_pred CCeEEEEcCCCCcEEEEe-cC--CCC----cceEEcCCCCEEEEEecCCcCCCCCE--EEEEEecC---CC-ccCCeEEE
Confidence 357999999887776653 11 100 12232 3565333333221 123 55554443 12 22222221
Q ss_pred -CCCCcceeEEEEeCCcEEEEecCCeEEEEECCCCcEEEEeec
Q 016018 315 -PFCEIKRPLSFCERGELIMEDYYREACSYNLGTKEIKKLPVL 356 (396)
Q Consensus 315 -~~~~~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~~~~~~~ 356 (396)
.......-+.+..+|.|++.. .+.+..||++.+.+..+..+
T Consensus 235 ~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp CCSSSCCCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred ECCCCCCCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 111222336677788866554 56799999988888777654
No 110
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=32.97 E-value=2.3e+02 Score=24.11 Aligned_cols=97 Identities=10% Similarity=0.109 Sum_probs=53.1
Q ss_pred EEEEEeCCCceeeeecCCCCccccccccceEEE-ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcc
Q 016018 242 FIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTV-LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIK 320 (396)
Q Consensus 242 ~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~ 320 (396)
.|..+|+.+.+...+.++.. .. ....+.. -+|+..++. . .. +.+|-++. ......+.... ..
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~--~~--~~~~~~~s~dg~~l~~~-~---~~--v~~~d~~~------~~~~~~~~~~~-~~ 282 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIM--DV--FYFSTAVNPAKTRAFGA-Y---NV--LESFDLEK------NASIKRVPLPH-SY 282 (337)
T ss_dssp EEEEEETTTCCEEEEEEEEC--SS--CEEEEEECTTSSEEEEE-E---SE--EEEEETTT------TEEEEEEECSS-CC
T ss_pred ceEEEeCCCCCceEeecCCC--CC--ceeeEEECCCCCEEEEe-C---Ce--EEEEECCC------CcCcceecCCC-ce
Confidence 68899999877654444331 10 1111222 345544444 1 34 77776653 23334443321 12
Q ss_pred eeEEEEeCCcEEEE-ecCCeEEEEECCCCcEE-EEee
Q 016018 321 RPLSFCERGELIME-DYYREACSYNLGTKEIK-KLPV 355 (396)
Q Consensus 321 ~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~~-~~~~ 355 (396)
.-+++..+|+.++. ..++.+..||+++++.. .+..
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 34667777765544 44678999999988754 4443
No 111
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=32.33 E-value=2.4e+02 Score=24.25 Aligned_cols=52 Identities=15% Similarity=0.284 Sum_probs=31.3
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCC----cEEEE-ecCCeEEEEECCC
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERG----ELIME-DYYREACSYNLGT 347 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g----~il~~-~~~~~l~~yd~~t 347 (396)
+.||-++. ...|.....+........-+++..++ .++.. ..++.+..||+++
T Consensus 191 v~lWd~~~---~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 191 IKLWKEEE---DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCEEEECT---TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred EEEEEeCC---CCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 99999864 34577666554322222334455543 44443 4577899999876
No 112
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=31.43 E-value=2.5e+02 Score=24.20 Aligned_cols=99 Identities=17% Similarity=0.089 Sum_probs=58.9
Q ss_pred ccEEEEEeCCCcee-eeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCC
Q 016018 240 GDFIFSFDMSDEVF-QKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCE 318 (396)
Q Consensus 240 ~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~ 318 (396)
...|..+|+.+.+- ..+++|.. ... ..++..+++|++..... + .+++.+- ..-+...+|+..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~--~fg---eGi~~~g~~lyv~t~~~--~----~v~viD~----~t~~v~~~i~~g-- 105 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDS--YFG---EGLTLLNEKLYQVVWLK--N----IGFIYDR----RTLSNIKNFTHQ-- 105 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTT--CCE---EEEEEETTEEEEEETTC--S----EEEEEET----TTTEEEEEEECC--
T ss_pred CCEEEEEECCCCCEEEEEecCCC--cce---EEEEEeCCEEEEEEecC--C----EEEEEEC----CCCcEEEEEECC--
Confidence 35899999987655 55677652 111 13455577777765432 3 3666663 234566667643
Q ss_pred cceeEEEEeCC-cEEEEecCCeEEEEECCCCcE-EEEee
Q 016018 319 IKRPLSFCERG-ELIMEDYYREACSYNLGTKEI-KKLPV 355 (396)
Q Consensus 319 ~~~p~~~~~~g-~il~~~~~~~l~~yd~~t~~~-~~~~~ 355 (396)
.....++..+| .+++....+.+...|++|.+. +.+.+
T Consensus 106 ~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 106 MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 11234555565 455554456899999999775 44544
No 113
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=30.44 E-value=69 Score=23.80 Aligned_cols=41 Identities=15% Similarity=0.100 Sum_probs=29.7
Q ss_pred cEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEE
Q 016018 122 RVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRIL 168 (396)
Q Consensus 122 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~ 168 (396)
.+++.+|.|+.| +|.... .....+.+..|+..+.|+|+...
T Consensus 12 ~V~~~d~~~~~W--~p~~~~----~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKW--VPAGGS----TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEE--EEGGGC----CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCce--EECCCC----CCceEEEEEEECCCCEEEEEEEE
Confidence 788999999966 554421 12345788889888899999864
No 114
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=29.39 E-value=2.6e+02 Score=23.67 Aligned_cols=197 Identities=9% Similarity=0.016 Sum_probs=95.2
Q ss_pred eeeCceEEEeEcCCcEEEEcchhhhhcc-ccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEc
Q 016018 108 GHCHGIVCFALLSGRVVLANPAIREFRH-LREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTL 186 (396)
Q Consensus 108 ~sc~GLlc~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~ 186 (396)
-+-+|-+++...++.+.|||..+++... +...... ........+.+.|.. ++ +.... . .-.+.+|+.
T Consensus 59 ~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~-~~--l~~~~-~------d~~i~~~d~ 126 (337)
T 1gxr_A 59 ISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCL--NRDNYIRSCKLLPDG-CT--LIVGG-E------ASTLSIWDL 126 (337)
T ss_dssp ECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECS--CTTSBEEEEEECTTS-SE--EEEEE-S------SSEEEEEEC
T ss_pred EecCCcEEEEcCCCeEEEEECCCCCceeeeeccccc--CCCCcEEEEEEcCCC-CE--EEEEc-C------CCcEEEEEC
Confidence 3445654444446789999988765332 1111100 012234556666643 22 22221 1 257888998
Q ss_pred CCCccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCcc
Q 016018 187 SADCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILN 263 (396)
Q Consensus 187 ~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~ 263 (396)
.++..+.... +..... ....+.+ +|......... ..|..+|+.+.+.. .+....
T Consensus 127 ~~~~~~~~~~----~~~~~~----~i~~~~~~~~~~~l~~~~~d------------g~v~~~d~~~~~~~~~~~~~~--- 183 (337)
T 1gxr_A 127 AAPTPRIKAE----LTSSAP----ACYALAISPDSKVCFSCCSD------------GNIAVWDLHNQTLVRQFQGHT--- 183 (337)
T ss_dssp CCC--EEEEE----EECSSS----CEEEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEECCCS---
T ss_pred CCCCcceeee----cccCCC----ceEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCceeeeeeccc---
Confidence 8876443321 000000 0011222 34333322222 36888998876543 233221
Q ss_pred ccccccceEEEe-cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-cCCeEE
Q 016018 264 EIDQEFSKLTVL-NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-YYREAC 341 (396)
Q Consensus 264 ~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~~~~l~ 341 (396)
.....+... +|...+.+... .. +.+|-++.. .....+..... ..-+.+..++..++.. .++.+.
T Consensus 184 ---~~i~~~~~~~~~~~l~~~~~d--g~--i~~~d~~~~------~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~~~~i~ 249 (337)
T 1gxr_A 184 ---DGASCIDISNDGTKLWTGGLD--NT--VRSWDLREG------RQLQQHDFTSQ-IFSLGYCPTGEWLAVGMESSNVE 249 (337)
T ss_dssp ---SCEEEEEECTTSSEEEEEETT--SE--EEEEETTTT------EEEEEEECSSC-EEEEEECTTSSEEEEEETTSCEE
T ss_pred ---CceEEEEECCCCCEEEEEecC--Cc--EEEEECCCC------ceEeeecCCCc-eEEEEECCCCCEEEEEcCCCcEE
Confidence 111222222 55554444432 44 999987742 23333333222 2335666777766654 467899
Q ss_pred EEECCCCcEEEE
Q 016018 342 SYNLGTKEIKKL 353 (396)
Q Consensus 342 ~yd~~t~~~~~~ 353 (396)
.||+++++...+
T Consensus 250 ~~~~~~~~~~~~ 261 (337)
T 1gxr_A 250 VLHVNKPDKYQL 261 (337)
T ss_dssp EEETTSSCEEEE
T ss_pred EEECCCCCeEEE
Confidence 999998876554
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=29.17 E-value=2.3e+02 Score=25.21 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=41.2
Q ss_pred cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEecCCeEEEEECCCCcE
Q 016018 276 NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDYYREACSYNLGTKEI 350 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~~~~l~~yd~~t~~~ 350 (396)
+|++.+++......+ +.||-++.. ..+..+..... ..-+++..+|.++....++.+..++..+++.
T Consensus 144 Dg~~la~as~~~d~~--i~iwd~~~~------~~~~~~~~~~~-V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 144 EGTVAAIASSKVPAI--MRIIDPSDL------TEKFEIETRGE-VKDLHFSTDGKVVAYITGSSLEVISTVTGSC 209 (365)
T ss_dssp TSSCEEEEESCSSCE--EEEEETTTT------EEEEEEECSSC-CCEEEECTTSSEEEEECSSCEEEEETTTCCE
T ss_pred CCCEEEEEECCCCCE--EEEeECCCC------cEEEEeCCCCc-eEEEEEccCCceEEeccceeEEEEEeccCcc
Confidence 566655544333355 999987742 34455544322 2346777888887776677777788777654
No 116
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=28.88 E-value=76 Score=25.55 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=27.8
Q ss_pred cEEEEcchhh-hhccccccccCCCCcceeEEEEEEecCCCCeEEEEEE
Q 016018 122 RVVLANPAIR-EFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRIL 168 (396)
Q Consensus 122 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~ 168 (396)
.+++.+|.|+ .|+ |.... . ..+.+-+|+..+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~Wv--P~g~~-----~-~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWV--PTSKH-----A-VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSE--ESCSS-----C-EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCcee--ecCCC-----C-eEEEEEEcCCCCEEEEEEcc
Confidence 7899999997 884 43321 1 25566789888889998854
No 117
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=28.33 E-value=4.4e+02 Score=25.91 Aligned_cols=191 Identities=11% Similarity=0.057 Sum_probs=93.8
Q ss_pred cEEEEcchhhhhc--cccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCcccccccccc
Q 016018 122 RVVLANPAIREFR--HLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANID 199 (396)
Q Consensus 122 ~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~ 199 (396)
.+++++.-|++.. .+-..+. ......+..+.|+. +|-++... ... ....+.+.+..++.|+.+...
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~----~~~~~~~~~~SpDG-~~l~~~~~--~~~---~~~~l~~~~~~~~~~~~l~~~-- 270 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTG----DPTTFLQSDLSRDG-KYLFVYIL--RGW---SENDVYWKRPGEKDFRLLVKG-- 270 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCC----CTTCEEEEEECTTS-CCEEEEEE--ETT---TEEEEEEECTTCSSCEEEEEC--
T ss_pred EEEEEECCCCchhceEEEecCC----CCEEEEEEEECCCC-CEEEEEEe--CCC---CceEEEEEcCCCCceEEeecC--
Confidence 4899988887643 2221111 01123455556543 45444332 211 113444445555677776531
Q ss_pred ccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCce---eeeecCCCCccccccccceEEEec
Q 016018 200 FLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEV---FQKLPVPNILNEIDQEFSKLTVLN 276 (396)
Q Consensus 200 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~---~~~i~lP~~~~~~~~~~~~l~~~~ 276 (396)
.. .....+..+|.+|..+... .....|+.+|+.+.. |+.+-.+.. ......+...+
T Consensus 271 -----~~---~~~~~~~~~g~l~~~s~~~---------~~~~~l~~~d~~~~~~~~~~~l~~~~~----~~~l~~~~~~~ 329 (695)
T 2bkl_A 271 -----VG---AKYEVHAWKDRFYVLTDEG---------APRQRVFEVDPAKPARASWKEIVPEDS----SASLLSVSIVG 329 (695)
T ss_dssp -----SS---CCEEEEEETTEEEEEECTT---------CTTCEEEEEBTTBCSGGGCEEEECCCS----SCEEEEEEEET
T ss_pred -----CC---ceEEEEecCCcEEEEECCC---------CCCCEEEEEeCCCCCccCCeEEecCCC----CCeEEEEEEEC
Confidence 10 1112444566665554322 124689999997654 555432220 11112233447
Q ss_pred CeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCC-CCcceeEEEEeCC-cEEEEec----CCeEEEEECCCCcE
Q 016018 277 ESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPF-CEIKRPLSFCERG-ELIMEDY----YREACSYNLGTKEI 350 (396)
Q Consensus 277 g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~-~~~~~p~~~~~~g-~il~~~~----~~~l~~yd~~t~~~ 350 (396)
+.|.+..... .. ..||+++-.+ + ....+... ......+....++ .+++... ...++.||+++++.
T Consensus 330 ~~lv~~~~~d--g~--~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 330 GHLSLEYLKD--AT--SEVRVATLKG--K---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TEEEEEEEET--TE--EEEEEEETTC--C---EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CEEEEEEEEC--CE--EEEEEEeCCC--C---eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 8776655543 34 7888887322 1 23444432 1211222333455 4444432 34799999999887
Q ss_pred EEEe
Q 016018 351 KKLP 354 (396)
Q Consensus 351 ~~~~ 354 (396)
+.+.
T Consensus 401 ~~l~ 404 (695)
T 2bkl_A 401 ELWA 404 (695)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7664
No 118
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=28.32 E-value=2.6e+02 Score=23.36 Aligned_cols=190 Identities=14% Similarity=0.032 Sum_probs=89.8
Q ss_pred eeCceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 109 HCHGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 109 sc~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
+.+++|+....++.+.|||..+++....-... ......+.+.|.. ++ +.... . .-.+.+++..+
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~--l~~~~-~------dg~i~~~~~~~ 90 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG------QGFLNSVCYDSEK-EL--LLFGG-K------DTMINGVPLFA 90 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEEC------SSCEEEEEEETTT-TE--EEEEE-T------TSCEEEEETTC
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecC------CccEEEEEECCCC-CE--EEEec-C------CCeEEEEEeee
Confidence 34456655556668999998776544432211 1134456666643 32 22221 1 14566666654
Q ss_pred C-ccccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcccccc
Q 016018 189 D-CWRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQ 267 (396)
Q Consensus 189 ~-~Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 267 (396)
. ..+.+.. +. .. ......+..+|.+....... ..|..+| ..+....+.... ...
T Consensus 91 ~~~~~~~~~----~~--~~--~~~i~~~~~~~~~l~~~~~d------------~~i~~~d-~~~~~~~~~~~~----~~v 145 (313)
T 3odt_A 91 TSGEDPLYT----LI--GH--QGNVCSLSFQDGVVISGSWD------------KTAKVWK-EGSLVYNLQAHN----ASV 145 (313)
T ss_dssp CTTSCC-CE----EC--CC--SSCEEEEEEETTEEEEEETT------------SEEEEEE-TTEEEEEEECCS----SCE
T ss_pred cCCCCcccc----hh--hc--ccCEEEEEecCCEEEEEeCC------------CCEEEEc-CCcEEEecccCC----Cce
Confidence 3 2222221 00 00 01112444455543333222 3688888 222222232221 011
Q ss_pred ccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecC-CCCcceeEEEEeCCcEEEEecCCeEEEEECC
Q 016018 268 EFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEP-FCEIKRPLSFCERGELIMEDYYREACSYNLG 346 (396)
Q Consensus 268 ~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~-~~~~~~p~~~~~~g~il~~~~~~~l~~yd~~ 346 (396)
........++.+.+.+... .. +.+|-.. .....+.. ......-+.+..++.++....++.+..||++
T Consensus 146 ~~~~~~~~~~~~l~~~~~d--~~--i~i~d~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~ 213 (313)
T 3odt_A 146 WDAKVVSFSENKFLTASAD--KT--IKLWQND--------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMH 213 (313)
T ss_dssp EEEEEEETTTTEEEEEETT--SC--EEEEETT--------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETT
T ss_pred eEEEEccCCCCEEEEEECC--CC--EEEEecC--------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECC
Confidence 1111122255555444432 44 8999622 12233332 2222344667778886666678899999999
Q ss_pred CCcEE
Q 016018 347 TKEIK 351 (396)
Q Consensus 347 t~~~~ 351 (396)
+++..
T Consensus 214 ~~~~~ 218 (313)
T 3odt_A 214 TGDVL 218 (313)
T ss_dssp TCCEE
T ss_pred chhhh
Confidence 87654
No 119
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=27.50 E-value=3e+02 Score=23.71 Aligned_cols=57 Identities=9% Similarity=0.170 Sum_probs=34.1
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecCCeEEEEECCCCcE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYYREACSYNLGTKEI 350 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~ 350 (396)
+.+|-+...+ ...-.....+.-......-+.+..+|..++. ..++.+..||+++++.
T Consensus 42 v~~W~~~~~~-~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 42 LISWKLTGDD-QKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGET 99 (319)
T ss_dssp EEEEEEEEET-TEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEecCCCCC-ccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe
Confidence 9999998532 1112223333322222334566677776665 4578899999998864
No 120
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=27.45 E-value=2.9e+02 Score=23.63 Aligned_cols=57 Identities=5% Similarity=-0.004 Sum_probs=34.7
Q ss_pred EEEEEEccCCC-------------CCCeEEEEEecCCCCcceeEEEEeCCcEEE--EecCCeEEEEECCCCc
Q 016018 293 IQIWVMDEFGA-------------NEIWKKLFTTEPFCEIKRPLSFCERGELIM--EDYYREACSYNLGTKE 349 (396)
Q Consensus 293 ~~IW~l~~~~~-------------~~~W~~~~~i~~~~~~~~p~~~~~~g~il~--~~~~~~l~~yd~~t~~ 349 (396)
+.||-++.... ..++.....+........-+++..+|..++ ...++.+..||+++.+
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 99999985321 123556665553332234466777787665 3457889999988653
No 121
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=27.17 E-value=3e+02 Score=23.63 Aligned_cols=54 Identities=6% Similarity=-0.030 Sum_probs=32.8
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecCCeEEEEECCCCcEEE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYYREACSYNLGTKEIKK 352 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~~~ 352 (396)
+.||-++.. .....+........-+.+..++..++. ..++.+..||+++++...
T Consensus 56 i~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 56 ASVWYSLNG------ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp EEEEETTTC------CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred EEEEeCCCc------hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 899977642 233444322222234556667765554 457789999999887544
No 122
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=26.41 E-value=4.2e+02 Score=25.11 Aligned_cols=190 Identities=16% Similarity=0.135 Sum_probs=94.6
Q ss_pred CceEEEeEcCCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCc
Q 016018 111 HGIVCFALLSGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADC 190 (396)
Q Consensus 111 ~GLlc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~ 190 (396)
+++++.....+...|||..|++...|...+. ..+.++|+. ++ ++... .+.. ....+.+++..++.
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---------~~~~~spDG-~~-la~~~-~~~~---~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLPG---------FGFVSDIRG-DL-IAGLG-FFGG---GRVSLFTSNLSSGG 186 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEESS---------CEEEEEEET-TE-EEEEE-EEET---TEEEEEEEETTTCC
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCCC---------ceEEECCCC-CE-EEEEE-EcCC---CCeEEEEEcCCCCC
Confidence 3466666655577799999998877754321 234455543 33 22222 1111 11457778888888
Q ss_pred cccccccccccccccccccCCcceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccc-cc-
Q 016018 191 WRELVANIDFLGAGTRFLKDNFECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEID-QE- 268 (396)
Q Consensus 191 Wr~~~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~-~~- 268 (396)
++.+..... . . ......=+|...+..... ....|..+|+++.+...+.-.. .... ..
T Consensus 187 ~~~l~~~~~-----~--~--~~~~~SpDG~~l~~~~~~----------~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~ 245 (582)
T 3o4h_A 187 LRVFDSGEG-----S--F--SSASISPGMKVTAGLETA----------REARLVTVDPRDGSVEDLELPS--KDFSSYRP 245 (582)
T ss_dssp CEEECCSSC-----E--E--EEEEECTTSCEEEEEECS----------SCEEEEEECTTTCCEEECCCSC--SHHHHHCC
T ss_pred ceEeecCCC-----c--c--ccceECCCCCEEEEccCC----------CeeEEEEEcCCCCcEEEccCCC--cChhhhhh
Confidence 887653110 0 0 011112245433322221 1247999999887766222211 1000 00
Q ss_pred --cceE-EEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEec-C---CeEE
Q 016018 269 --FSKL-TVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMEDY-Y---REAC 341 (396)
Q Consensus 269 --~~~l-~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~~-~---~~l~ 341 (396)
.... ..-+|.+.+..... .. +.||.+ +. ..+ ........+.+. +|.+++... . ..++
T Consensus 246 ~~~~~~~~spdg~~~~~~~~~--g~--~~l~~~---g~---~~~-----~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~ 309 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVVARRE--GR--SAVFID---GE---RVE-----APQGNHGRVVLW-RGKLVTSHTSLSTPPRIV 309 (582)
T ss_dssp SEEEEEEECTTSCEEEEEEET--TE--EEEEET---TE---EEC-----CCSSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred ccccceeEcCCCcEEEEEEcC--Cc--EEEEEE---CC---eec-----cCCCceEEEEec-CCEEEEEEcCCCCCCeEE
Confidence 0000 23467655544433 34 899998 21 111 111222345666 787776533 2 3688
Q ss_pred EEECCCCcEEEE
Q 016018 342 SYNLGTKEIKKL 353 (396)
Q Consensus 342 ~yd~~t~~~~~~ 353 (396)
.+|.++ +.+.+
T Consensus 310 ~~d~~~-~~~~l 320 (582)
T 3o4h_A 310 SLPSGE-PLLEG 320 (582)
T ss_dssp EETTCC-EEECC
T ss_pred EEcCCC-ceEEE
Confidence 888876 55444
No 123
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=26.31 E-value=4.5e+02 Score=25.44 Aligned_cols=121 Identities=14% Similarity=0.170 Sum_probs=62.7
Q ss_pred ceEEEcceEEEEEeccCCcccccCCCCccEEEEEeCCC--ceeeee-cCCCCcc-ccccccceEEEecCeeEEEEeecCC
Q 016018 213 ECQYFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSD--EVFQKL-PVPNILN-EIDQEFSKLTVLNESLAFVLRDKYR 288 (396)
Q Consensus 213 ~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--e~~~~i-~lP~~~~-~~~~~~~~l~~~~g~L~~~~~~~~~ 288 (396)
.++..+|.+|...... .|.++|.++ +.|+.- ..|.... ........++..+|+|++....
T Consensus 63 ~P~v~~g~vyv~~~~~-------------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d--- 126 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-------------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD--- 126 (582)
T ss_dssp CCEEETTEEEEEETTT-------------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT---
T ss_pred ccEEECCEEEEEcCCC-------------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC---
Confidence 4788999999866433 599999865 456532 2222100 0000012344567777654321
Q ss_pred CccEEEEEEEccCCCCCCeEEEEEecC-C-CCcceeEEEEe--CCc-EEEEec-------CCeEEEEECCCCcEEEE
Q 016018 289 KSYEIQIWVMDEFGANEIWKKLFTTEP-F-CEIKRPLSFCE--RGE-LIMEDY-------YREACSYNLGTKEIKKL 353 (396)
Q Consensus 289 ~~~~~~IW~l~~~~~~~~W~~~~~i~~-~-~~~~~p~~~~~--~g~-il~~~~-------~~~l~~yd~~t~~~~~~ 353 (396)
-.|..|+-...+..|+....-.. . .....|+.... +|+ +++... ++.++.||.+|++..+.
T Consensus 127 ----g~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 127 ----ASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp ----TEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred ----CEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 12445553212456765421100 0 01134554432 232 455533 56899999999987774
No 124
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=26.30 E-value=4.6e+02 Score=25.52 Aligned_cols=193 Identities=11% Similarity=0.085 Sum_probs=93.0
Q ss_pred CcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCC-cccccccccc
Q 016018 121 GRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSAD-CWRELVANID 199 (396)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~-~Wr~~~~~~~ 199 (396)
..++|||..|++...+...... ......+.+.|..+ + ++... .... .....+.+++..++ ..+.+..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~----~~~~~~~~~spdg~-~-l~~~~-~~~~--~~~~~v~~~d~~~g~~~~~~~~--- 302 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK----EKFLTNLSWSPDEN-I-LYVAE-VNRA--QNECKVNAYDAETGRFVRTLFV--- 302 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT----TCEEEEEEECTTSS-E-EEEEE-ECTT--SCEEEEEEEETTTCCEEEEEEE---
T ss_pred eEEEEEECCCCceEeeccCCCC----ceeEeeEEEECCCC-E-EEEEE-eCCC--CCeeEEEEEECCCCceeeEEEE---
Confidence 3799999999887666432111 12234455665432 2 22221 1111 12357777888777 6655432
Q ss_pred cccccccccc-CCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccce-EEE-
Q 016018 200 FLGAGTRFLK-DNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSK-LTV- 274 (396)
Q Consensus 200 ~~~~~~~~~~-~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~-l~~- 274 (396)
+....+.. .......- +|.+.+..... ....|..+|...+....+.... ..... +..
T Consensus 303 --~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~----------g~~~l~~~~~~~~~~~~l~~~~------~~v~~~~~~s 364 (706)
T 2z3z_A 303 --ETDKHYVEPLHPLTFLPGSNNQFIWQSRRD----------GWNHLYLYDTTGRLIRQVTKGE------WEVTNFAGFD 364 (706)
T ss_dssp --EECSSCCCCCSCCEECTTCSSEEEEEECTT----------SSCEEEEEETTSCEEEECCCSS------SCEEEEEEEC
T ss_pred --ccCCCeECccCCceeecCCCCEEEEEEccC----------CccEEEEEECCCCEEEecCCCC------eEEEeeeEEc
Confidence 00011110 01111222 67766554332 1357888887776666553221 11111 222
Q ss_pred ecCe-eEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecC----CeEEEEECCCC
Q 016018 275 LNES-LAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYY----REACSYNLGTK 348 (396)
Q Consensus 275 ~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~----~~l~~yd~~t~ 348 (396)
-+|+ |++......... ..||.++-.+ ... ..+..... ...+.+..+|+.++. ... ..++.+|++++
T Consensus 365 pdg~~l~~~~~~~~~~~--~~l~~~d~~~--~~~---~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 365 PKGTRLYFESTEASPLE--RHFYCIDIKG--GKT---KDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp TTSSEEEEEESSSCTTC--BEEEEEETTC--CCC---EESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred CCCCEEEEEecCCCCce--EEEEEEEcCC--CCc---eeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 2454 444443322223 6788877432 221 22332222 234566777764443 222 46999999988
Q ss_pred cEE
Q 016018 349 EIK 351 (396)
Q Consensus 349 ~~~ 351 (396)
+.+
T Consensus 437 ~~~ 439 (706)
T 2z3z_A 437 SHT 439 (706)
T ss_dssp EEE
T ss_pred eEe
Confidence 743
No 125
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=25.93 E-value=3.4e+02 Score=23.81 Aligned_cols=53 Identities=19% Similarity=0.236 Sum_probs=32.5
Q ss_pred EEEEEEccCCCCCCeEEEEEecC---C---CCcceeEEEEeCCcEEEEe-cC---CeEEEEECCCCcEE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEP---F---CEIKRPLSFCERGELIMED-YY---REACSYNLGTKEIK 351 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~---~---~~~~~p~~~~~~g~il~~~-~~---~~l~~yd~~t~~~~ 351 (396)
+.||-+... .....+.. . .....-+.+..++.+++.. .+ +.+..||+++++..
T Consensus 209 i~i~d~~~~------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 209 VQISELSTL------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp EEEEETTTT------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred EEEEECCCC------ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 999988752 23333333 1 2222345666777766664 35 68999999888653
No 126
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=25.82 E-value=3.2e+02 Score=23.46 Aligned_cols=55 Identities=7% Similarity=0.068 Sum_probs=34.2
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecCCeEEEEECCCCcEEE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYYREACSYNLGTKEIKK 352 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~~~ 352 (396)
+.+|-++.. ......+........-+.+..++..++. ..++.+..||+++.+...
T Consensus 199 i~i~d~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 199 ISKYDVSNN-----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp EEEEETTTT-----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEECCCC-----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 999988742 2334444332222234566677776655 457789999999987644
No 127
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=25.80 E-value=59 Score=25.11 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=25.3
Q ss_pred cEEEEecCCeEEEEECCCCcEEEEeecCcccccc
Q 016018 330 ELIMEDYYREACSYNLGTKEIKKLPVLPCTLKIQ 363 (396)
Q Consensus 330 ~il~~~~~~~l~~yd~~t~~~~~~~~~~~~~~~~ 363 (396)
+|+.....-.++.||..+++|++..++|.=+.++
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG~LFv~~ 63 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYH 63 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcceEEEEE
Confidence 5666655557888899999999999998533333
No 128
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=25.37 E-value=96 Score=23.14 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=30.5
Q ss_pred cEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEE
Q 016018 122 RVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRIL 168 (396)
Q Consensus 122 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~ 168 (396)
.+++++|.|++| +|..... .....+.+..|+..+.|.|+...
T Consensus 12 ~V~~~d~~~~~W--~p~~~g~---~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRW--LPAGTGP---QAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSC--CBSSCSC---CCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCce--eECCCCC---CCccEEEEEEeCCCCEEEEEEEE
Confidence 678899999997 4644311 12345788889888999999865
No 129
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=25.18 E-value=3.1e+02 Score=23.11 Aligned_cols=115 Identities=12% Similarity=0.072 Sum_probs=0.0
Q ss_pred cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEEec---CeeEEEEeecCCCccEEE
Q 016018 218 RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTVLN---ESLAFVLRDKYRKSYEIQ 294 (396)
Q Consensus 218 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~~~---g~L~~~~~~~~~~~~~~~ 294 (396)
+|.+-...... ..|..+|+.++.-.....-. ..........+.-.. |.+.+.+... .. +.
T Consensus 22 ~~~~l~~~~~d------------g~i~iw~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~d~~~l~s~~~d--g~--v~ 84 (351)
T 3f3f_A 22 YGRHVATCSSD------------QHIKVFKLDKDTSNWELSDS-WRAHDSSIVAIDWASPEYGRIIASASYD--KT--VK 84 (351)
T ss_dssp SSSEEEEEETT------------SEEEEEEECSSSCCEEEEEE-EECCSSCEEEEEECCGGGCSEEEEEETT--SC--EE
T ss_pred CCCEEEEeeCC------------CeEEEEECCCCCCcceecce-eccCCCcEEEEEEcCCCCCCEEEEEcCC--Ce--EE
Q ss_pred EEEEccCC---CCCCeEEEEEecCCCCcceeEEEEeC--CcEEEE-ecCCeEEEEECCCCc
Q 016018 295 IWVMDEFG---ANEIWKKLFTTEPFCEIKRPLSFCER--GELIME-DYYREACSYNLGTKE 349 (396)
Q Consensus 295 IW~l~~~~---~~~~W~~~~~i~~~~~~~~p~~~~~~--g~il~~-~~~~~l~~yd~~t~~ 349 (396)
||-++... ....|.....+........-+.+..+ +..++. ..++.+..||+++++
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
No 130
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=25.17 E-value=3.3e+02 Score=23.51 Aligned_cols=57 Identities=12% Similarity=0.183 Sum_probs=34.1
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-cCCeEEEEECCCCcEE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-YYREACSYNLGTKEIK 351 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~~~~l~~yd~~t~~~~ 351 (396)
+.||-+++. ...+.....+........-+.+..++.+|+.. .++.+..||..++..+
T Consensus 131 v~iwd~~~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 131 VWIWETDES--GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE 188 (330)
T ss_dssp EEEEECCTT--CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE
T ss_pred EEEEeccCC--CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCee
Confidence 999998643 24466655554322222335556677666653 4667888888776443
No 131
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=24.79 E-value=3.7e+02 Score=23.87 Aligned_cols=205 Identities=5% Similarity=-0.053 Sum_probs=97.0
Q ss_pred Cc-eEEEeEcCCcEEEEcchhhhhccccccccCCC-CcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 111 HG-IVCFALLSGRVVLANPAIREFRHLREHCYHSF-SYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 111 ~G-Llc~~~~~~~~~V~NP~T~~~~~LP~~~~~~~-~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
+| +|+....++.+.|||..+++...-...+...+ ........+.+.|....+ ++... . .-.+.||+..+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~-l~s~~--~------dg~i~iwd~~~ 163 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNV-LLSAG--C------DNVILVWDVGT 163 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTE-EEEEE--T------TSCEEEEETTT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCE-EEEEc--C------CCEEEEEECCC
Confidence 45 44444556689999988875432110000000 011234456666654333 22221 1 15688888887
Q ss_pred CccccccccccccccccccccCCcceEEE--cceEEEEEeccCCcccccCCCCccEEEEEeCCCceee-eecCCCCcccc
Q 016018 189 DCWRELVANIDFLGAGTRFLKDNFECQYF--RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQ-KLPVPNILNEI 265 (396)
Q Consensus 189 ~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~ 265 (396)
+.....-. ...... ....+.+ +|.+...... ...|..+|+.+.+.. .+.... .
T Consensus 164 ~~~~~~~~----~~~~~~----~v~~~~~~~~~~~l~~~~~------------d~~i~iwd~~~~~~~~~~~~~~----~ 219 (402)
T 2aq5_A 164 GAAVLTLG----PDVHPD----TIYSVDWSRDGALICTSCR------------DKRVRVIEPRKGTVVAEKDRPH----E 219 (402)
T ss_dssp TEEEEEEC----TTTCCS----CEEEEEECTTSSCEEEEET------------TSEEEEEETTTTEEEEEEECSS----C
T ss_pred CCccEEEe----cCCCCC----ceEEEEECCCCCEEEEEec------------CCcEEEEeCCCCceeeeeccCC----C
Confidence 64322110 000000 0012222 3432222222 237899999876543 221111 0
Q ss_pred ccccceEE-EecCeeEEEEee-cCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-e-cCCeEE
Q 016018 266 DQEFSKLT-VLNESLAFVLRD-KYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-D-YYREAC 341 (396)
Q Consensus 266 ~~~~~~l~-~~~g~L~~~~~~-~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~-~~~~l~ 341 (396)
......+. .-+|++.+.+.. ..... +.||-+.... .=.....+..... ..-+.+..+|..++. . .++.+.
T Consensus 220 ~~~~~~~~~~~~~~~l~~g~~~~~d~~--i~iwd~~~~~---~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 220 GTRPVHAVFVSEGKILTTGFSRMSERQ--VALWDTKHLE---EPLSLQELDTSSG-VLLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp SSSCCEEEECSTTEEEEEEECTTCCEE--EEEEETTBCS---SCSEEEECCCCSS-CEEEEEETTTTEEEEEETTCSCEE
T ss_pred CCcceEEEEcCCCcEEEEeccCCCCce--EEEEcCcccc---CCceEEeccCCCc-eeEEEEcCCCCEEEEEEcCCCeEE
Confidence 11111222 235666555532 12234 9999988632 1122233332222 234566777776654 4 377899
Q ss_pred EEECCCCc--EEEEe
Q 016018 342 SYNLGTKE--IKKLP 354 (396)
Q Consensus 342 ~yd~~t~~--~~~~~ 354 (396)
.||+++++ ++.+.
T Consensus 294 i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 294 YFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEECSSTTCEEEEE
T ss_pred EEEecCCCcceEeec
Confidence 99999987 55554
No 132
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=24.43 E-value=3.5e+02 Score=23.48 Aligned_cols=104 Identities=11% Similarity=0.112 Sum_probs=54.2
Q ss_pred ceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceE-EEecCeeEEEEeecCCCccEEEEEE
Q 016018 219 GACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKL-TVLNESLAFVLRDKYRKSYEIQIWV 297 (396)
Q Consensus 219 G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l-~~~~g~L~~~~~~~~~~~~~~~IW~ 297 (396)
|.+||..... ..|..+|..+++...+..|.. ...+ ..-+|++.+.. . .. |+.
T Consensus 61 ~~l~~~d~~~------------~~i~~~d~~~~~~~~~~~~~~-------v~~i~~~~dg~l~v~~--~--~g----l~~ 113 (326)
T 2ghs_A 61 GTAWWFNILE------------RELHELHLASGRKTVHALPFM-------GSALAKISDSKQLIAS--D--DG----LFL 113 (326)
T ss_dssp TEEEEEEGGG------------TEEEEEETTTTEEEEEECSSC-------EEEEEEEETTEEEEEE--T--TE----EEE
T ss_pred CEEEEEECCC------------CEEEEEECCCCcEEEEECCCc-------ceEEEEeCCCeEEEEE--C--CC----EEE
Confidence 7899986543 479999999888777666541 1122 23567776543 1 22 444
Q ss_pred EccCCCCCCeEEEEEecCCCC--cceeEEEEeCCcEEEEec-------CCeEEEEECCCCcEEEE
Q 016018 298 MDEFGANEIWKKLFTTEPFCE--IKRPLSFCERGELIMEDY-------YREACSYNLGTKEIKKL 353 (396)
Q Consensus 298 l~~~~~~~~W~~~~~i~~~~~--~~~p~~~~~~g~il~~~~-------~~~l~~yd~~t~~~~~~ 353 (396)
++.. ............... ...-+.+..+|.+++... .+.++.|| +++++.+
T Consensus 114 ~d~~--~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 114 RDTA--TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EETT--TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred EECC--CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 4421 123333221111011 112345556777766543 14688888 4555443
No 133
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=24.34 E-value=3.9e+02 Score=24.00 Aligned_cols=55 Identities=11% Similarity=0.180 Sum_probs=35.2
Q ss_pred EEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-cCCeEEEEECCCCcEE
Q 016018 293 IQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-YYREACSYNLGTKEIK 351 (396)
Q Consensus 293 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~~~~l~~yd~~t~~~~ 351 (396)
+.||-++. ++-.+...+........-+++..+|..++.. .++.+..||+++++..
T Consensus 127 V~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 127 VYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp EEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 99997764 2344444443222233456777888777664 5778999999988654
No 134
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=24.21 E-value=3.3e+02 Score=23.14 Aligned_cols=99 Identities=13% Similarity=0.087 Sum_probs=52.1
Q ss_pred EEEEEeCCCceeeeec-CCCCccccccccceEE-EecCeeEEEEeecC-------CCccEEEEEEEccCCCCCCeEEEEE
Q 016018 242 FIFSFDMSDEVFQKLP-VPNILNEIDQEFSKLT-VLNESLAFVLRDKY-------RKSYEIQIWVMDEFGANEIWKKLFT 312 (396)
Q Consensus 242 ~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~l~-~~~g~L~~~~~~~~-------~~~~~~~IW~l~~~~~~~~W~~~~~ 312 (396)
.|..+|.++.+++.+. .+.. ........+. .-+|+|.+...... ... -.||.++..+ .-....
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~--~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~--~~l~~~d~~g---~~~~~~- 145 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDND--KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ--GALYSLFPDH---HVKKYF- 145 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTT--CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC--EEEEEECTTS---CEEEEE-
T ss_pred eEEEEECCCCcEEEEEecCCC--CCCCCCCCEEECCCCCEEEecCCcccccccccCCC--cEEEEEECCC---CEEEEe-
Confidence 7999999998887663 3221 1111112233 34688776554422 123 6788887532 222211
Q ss_pred ecCCCCcceeEEEEeCCcEE-EEec-CCeEEEEEC--CCCcE
Q 016018 313 TEPFCEIKRPLSFCERGELI-MEDY-YREACSYNL--GTKEI 350 (396)
Q Consensus 313 i~~~~~~~~p~~~~~~g~il-~~~~-~~~l~~yd~--~t~~~ 350 (396)
... ....-+++..+|+.+ +... .+.+..||+ +++++
T Consensus 146 -~~~-~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 146 -DQV-DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp -EEE-SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE
T ss_pred -ecc-ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc
Confidence 110 112235666777644 4443 467888876 56655
No 135
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=24.16 E-value=5.3e+02 Score=25.53 Aligned_cols=113 Identities=12% Similarity=0.048 Sum_probs=62.1
Q ss_pred cceEEEEEeccCCcccccCCCCccEEEEEeCCC--ceeeeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEE
Q 016018 218 RGACYWILWDKSVGINYNNLVNGDFIFSFDMSD--EVFQKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQI 295 (396)
Q Consensus 218 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--e~~~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~I 295 (396)
++.+|+..... .....|+..|+.+ +.|+.+- |.. . . ....+...++.|.+..... .. ..|
T Consensus 327 g~~l~~~s~~~---------~~~~~l~~~d~~~~~~~~~~l~-~~~--~-~-~l~~~~~~~~~lv~~~~~d--g~--~~l 388 (741)
T 1yr2_A 327 GDQLWFVSGDG---------APLKKIVRVDLSGSTPRFDTVV-PES--K-D-NLESVGIAGNRLFASYIHD--AK--SQV 388 (741)
T ss_dssp TTEEEEEECTT---------CTTCEEEEEECSSSSCEEEEEE-CCC--S-S-EEEEEEEEBTEEEEEEEET--TE--EEE
T ss_pred CCEEEEEECCC---------CCCCEEEEEeCCCCccccEEEe-cCC--C-C-eEEEEEEECCEEEEEEEEC--CE--EEE
Confidence 44566665432 2245799999988 5676653 331 1 1 1122344477776655543 33 778
Q ss_pred EEEccCCCCCCeEEEEEecCC-CCcceeEEEEeCC-cEEEEec----CCeEEEEECCCCcEEEE
Q 016018 296 WVMDEFGANEIWKKLFTTEPF-CEIKRPLSFCERG-ELIMEDY----YREACSYNLGTKEIKKL 353 (396)
Q Consensus 296 W~l~~~~~~~~W~~~~~i~~~-~~~~~p~~~~~~g-~il~~~~----~~~l~~yd~~t~~~~~~ 353 (396)
|+++-.+ + ....+... ......+....++ .+++... ...++.||+++++.+.+
T Consensus 389 ~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 389 LAFDLDG--K---PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEETTS--C---EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEEeCCC--C---ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 8887322 1 33445432 1222223344455 4555532 35799999999887655
No 136
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=23.76 E-value=3.2e+02 Score=22.74 Aligned_cols=192 Identities=15% Similarity=0.139 Sum_probs=93.0
Q ss_pred eCceEEEeEc-CCcEEEEcchhhhhccccccccCCCCcceeEEEEEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCC
Q 016018 110 CHGIVCFALL-SGRVVLANPAIREFRHLREHCYHSFSYWMGCVGFGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSA 188 (396)
Q Consensus 110 c~GLlc~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t 188 (396)
.+|.|.+.+. .+.+.++++.++....+-... .....++.+|+..+. +.... . ....+.+++..+
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~------~~~p~~ia~d~~~~~--lyv~d---~----~~~~I~~~~~~g 110 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPTTIIRQD------LGSPEGIALDHLGRT--IFWTD---S----QLDRIEVAKMDG 110 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEECTT------CCCEEEEEEETTTTE--EEEEE---T----TTTEEEEEETTS
T ss_pred CCCEEEEEECCCCEEEEEecCCCCcEEEEECC------CCCccEEEEEecCCe--EEEEE---C----CCCEEEEEEcCC
Confidence 4677766664 358888888776544332111 113456778875432 22221 1 124677777754
Q ss_pred CccccccccccccccccccccCCcceEEE---cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCcccc
Q 016018 189 DCWRELVANIDFLGAGTRFLKDNFECQYF---RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEI 265 (396)
Q Consensus 189 ~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~ 265 (396)
..-+.+.. .. ... ..++.+ +|.+||..... ....|..+++.......+.... .
T Consensus 111 ~~~~~~~~--------~~-~~~-P~~i~vd~~~g~lyv~~~~~----------~~~~I~~~~~dg~~~~~~~~~~----~ 166 (267)
T 1npe_A 111 TQRRVLFD--------TG-LVN-PRGIVTDPVRGNLYWTDWNR----------DNPKIETSHMDGTNRRILAQDN----L 166 (267)
T ss_dssp CSCEEEEC--------SS-CSS-EEEEEEETTTTEEEEEECCS----------SSCEEEEEETTSCCCEEEECTT----C
T ss_pred CCEEEEEE--------CC-CCC-ccEEEEeeCCCEEEEEECCC----------CCcEEEEEecCCCCcEEEEECC----C
Confidence 33222211 00 011 124444 58899976431 1247888888765444332111 0
Q ss_pred ccccceEEEe--cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEe-CCcEEEEec-CCeEE
Q 016018 266 DQEFSKLTVL--NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCE-RGELIMEDY-YREAC 341 (396)
Q Consensus 266 ~~~~~~l~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~-~g~il~~~~-~~~l~ 341 (396)
. .-..++.. ++.|++..... . .|++++-.+ . .....+. ....|.++.. ++.+++... .+.+.
T Consensus 167 ~-~P~gia~d~~~~~lyv~d~~~--~----~I~~~~~~g--~--~~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~ 232 (267)
T 1npe_A 167 G-LPNGLTFDAFSSQLCWVDAGT--H----RAECLNPAQ--P--GRRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVI 232 (267)
T ss_dssp S-CEEEEEEETTTTEEEEEETTT--T----EEEEEETTE--E--EEEEEEE---CCCSEEEEEEETTEEEEEETTTTEEE
T ss_pred C-CCcEEEEcCCCCEEEEEECCC--C----EEEEEecCC--C--ceEEEec---CCCCceEEEEeCCEEEEEECCCCeEE
Confidence 0 01123332 45666544322 2 355555322 1 1111122 2234555443 455666543 46899
Q ss_pred EEECCCCcE-EEEe
Q 016018 342 SYNLGTKEI-KKLP 354 (396)
Q Consensus 342 ~yd~~t~~~-~~~~ 354 (396)
.+|.++++. +.+.
T Consensus 233 ~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 233 AMDLAISKEMDTFH 246 (267)
T ss_dssp EEETTTTEEEEEEC
T ss_pred EEeCCCCCceEEEc
Confidence 999998765 4444
No 137
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=23.51 E-value=3.4e+02 Score=23.06 Aligned_cols=72 Identities=15% Similarity=0.113 Sum_probs=41.2
Q ss_pred cCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCc-EEEE-ecCCeEEEEEC-CCCcEEE
Q 016018 276 NESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGE-LIME-DYYREACSYNL-GTKEIKK 352 (396)
Q Consensus 276 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-il~~-~~~~~l~~yd~-~t~~~~~ 352 (396)
+|.+.+++... .. +.||-++... ..-......... .-..-+++..++. .++. ..++.+..||+ ++++...
T Consensus 22 ~~~~l~~~~~d--~~--v~iw~~~~~~--~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 94 (342)
T 1yfq_A 22 SKSLLLITSWD--GS--LTVYKFDIQA--KNVDLLQSLRYK-HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA 94 (342)
T ss_dssp GGTEEEEEETT--SE--EEEEEEETTT--TEEEEEEEEECS-SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEE
T ss_pred CCCEEEEEcCC--Ce--EEEEEeCCCC--ccccceeeeecC-CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEe
Confidence 45544444322 44 9999998632 111122222222 2223466677787 5555 45778999999 9888765
Q ss_pred Ee
Q 016018 353 LP 354 (396)
Q Consensus 353 ~~ 354 (396)
+.
T Consensus 95 ~~ 96 (342)
T 1yfq_A 95 LT 96 (342)
T ss_dssp CB
T ss_pred cc
Confidence 54
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=23.43 E-value=6.4e+02 Score=26.21 Aligned_cols=35 Identities=9% Similarity=-0.112 Sum_probs=26.2
Q ss_pred eEEEEeCCcEEEEecCCeEEEEECCCCc--EEEEeec
Q 016018 322 PLSFCERGELIMEDYYREACSYNLGTKE--IKKLPVL 356 (396)
Q Consensus 322 p~~~~~~g~il~~~~~~~l~~yd~~t~~--~~~~~~~ 356 (396)
.+.+..||+.++...++.+..+|+++++ .+.+.+.
T Consensus 612 ~~~~S~DG~~l~~~~~~~i~~~d~~~~~~~~~~~~~~ 648 (1045)
T 1k32_A 612 DLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETD 648 (1045)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCC
T ss_pred eEEECCCCCEEEEEcCCcEEEEeCccCcccCCccccc
Confidence 4677888877777666689999999887 5555553
No 139
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=23.14 E-value=5.5e+02 Score=25.27 Aligned_cols=143 Identities=8% Similarity=-0.030 Sum_probs=71.6
Q ss_pred ceEEEEEcCCC--ccccccccccccccccccccCCcceE-EEcceEEEEEeccCCcccccCCCCccEEEEEeCCCc---e
Q 016018 179 LKVEVYTLSAD--CWRELVANIDFLGAGTRFLKDNFECQ-YFRGACYWILWDKSVGINYNNLVNGDFIFSFDMSDE---V 252 (396)
Q Consensus 179 ~~~evys~~t~--~Wr~~~~~~~~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e---~ 252 (396)
..+.++++.++ .|+.+... .. .....+ .-++.+|+++... .....|+..|+.+. .
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~-------~~---~~~~~~~~~g~~l~~~t~~~---------~~~~~l~~~d~~~~~~~~ 319 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGD-------LD---ADVSLVDNKGSTLYLLTNRD---------APNRRLVTVDAANPGPAH 319 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECS-------SS---SCEEEEEEETTEEEEEECTT---------CTTCEEEEEETTSCCGGG
T ss_pred cEEEEEECCCCCCceEEEeCC-------CC---ceEEEEeccCCEEEEEECCC---------CCCCEEEEEeCCCCCccc
Confidence 46666777654 67666521 10 011123 2356788876543 12468999999874 3
Q ss_pred eeeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCC-CcceeEEEEeCC-c
Q 016018 253 FQKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFC-EIKRPLSFCERG-E 330 (396)
Q Consensus 253 ~~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~~g-~ 330 (396)
|+.+ .|.. .. .. .+...++.|.+...... . -.|++++-.+ .+. ..+.... .....+....++ .
T Consensus 320 ~~~l-~~~~---~~-~~-~~s~~g~~lv~~~~~~g--~--~~l~~~d~~g---~~~--~~l~~p~~~~~~~~~~~~d~~~ 384 (693)
T 3iuj_A 320 WRDL-IPER---QQ-VL-TVHSGSGYLFAEYMVDA--T--ARVEQFDYEG---KRV--REVALPGLGSVSGFNGKHDDPA 384 (693)
T ss_dssp CEEE-ECCC---SS-CE-EEEEETTEEEEEEEETT--E--EEEEEECTTS---CEE--EEECCSSSSEEEECCCCTTCSC
T ss_pred cEEE-ecCC---CC-EE-EEEEECCEEEEEEEECC--e--eEEEEEECCC---Cee--EEeecCCCceEEeeecCCCCCE
Confidence 5543 2331 11 11 34444566655444432 2 3455554222 233 3343221 111112222234 5
Q ss_pred EEEEecC----CeEEEEECCCCcEEEEee
Q 016018 331 LIMEDYY----REACSYNLGTKEIKKLPV 355 (396)
Q Consensus 331 il~~~~~----~~l~~yd~~t~~~~~~~~ 355 (396)
+++.... ..++.||+++++.+.+..
T Consensus 385 l~~~~ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 385 LYFGFENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp EEEEEECSSSCCEEEEECTTTCCEEEEEC
T ss_pred EEEEecCCCCCCEEEEEECCCCeEEEEEe
Confidence 6655433 689999999998877653
No 140
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=22.43 E-value=4e+02 Score=23.49 Aligned_cols=75 Identities=8% Similarity=-0.044 Sum_probs=40.8
Q ss_pred ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEEe-cCCeEEEEECCCCcEE
Q 016018 275 LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIMED-YYREACSYNLGTKEIK 351 (396)
Q Consensus 275 ~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~~-~~~~l~~yd~~t~~~~ 351 (396)
-+|...+.+.........+.+|-+.... ..-.+...+........-+++..+|.+|... .++.+..||.++.+..
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSGN--TSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETTE--EEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCEEEEEecCCcceeEEeecccccce--ecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 4666666555543333125555555321 1111223333222222346778888877664 5678999999998753
No 141
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=21.90 E-value=3.7e+02 Score=22.83 Aligned_cols=100 Identities=13% Similarity=0.142 Sum_probs=49.3
Q ss_pred cEEEEEeCCCceeeeecCCCCccccccccceE-EEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCc
Q 016018 241 DFIFSFDMSDEVFQKLPVPNILNEIDQEFSKL-TVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEI 319 (396)
Q Consensus 241 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l-~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~ 319 (396)
..|+.||.+.+....+++.............+ ...+|.+.+.... ... +..|-.+ + +..|+... +.. .
T Consensus 99 ~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~--~~~--v~~~d~~--G-~~~w~~~~--~~~-~- 167 (276)
T 3no2_A 99 STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA--TSE--VREIAPN--G-QLLNSVKL--SGT-P- 167 (276)
T ss_dssp EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT--TTE--EEEECTT--S-CEEEEEEC--SSC-C-
T ss_pred CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC--CCE--EEEECCC--C-CEEEEEEC--CCC-c-
Confidence 36888888666545454432110000001111 2335665443322 122 4444433 3 45565433 111 1
Q ss_pred ceeEEEEeCCcEEEEec-CCeEEEEECCCCcEEE
Q 016018 320 KRPLSFCERGELIMEDY-YREACSYNLGTKEIKK 352 (396)
Q Consensus 320 ~~p~~~~~~g~il~~~~-~~~l~~yd~~t~~~~~ 352 (396)
.-.....+|.+++... .++++.+|++|+++.+
T Consensus 168 -~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 168 -FSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp -CEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred -cceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 1133456778887755 4479999999877654
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=21.77 E-value=5.7e+02 Score=24.98 Aligned_cols=210 Identities=11% Similarity=0.067 Sum_probs=0.0
Q ss_pred EeeeCceEEEeEcCC---------------------------------cEEEEcchh-hhhccccccccCCCCcceeEEE
Q 016018 107 VGHCHGIVCFALLSG---------------------------------RVVLANPAI-REFRHLREHCYHSFSYWMGCVG 152 (396)
Q Consensus 107 ~~sc~GLlc~~~~~~---------------------------------~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~ 152 (396)
.+..+-.|++...++ .++++|..+ ++...+...... ......
T Consensus 216 ~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~----~~~~~~ 291 (741)
T 2ecf_A 216 WAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQ----DIYLAR 291 (741)
T ss_dssp ECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCS----SEEEEE
T ss_pred ECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCc----ceEEEE
Q ss_pred EEEecCCCCeEEEEEEEEeCCCCcccceEEEEEcCCCccccccccccccccccccc-cCCcceEEEcceEEEEEeccCCc
Q 016018 153 FGYDVKSNDYKVVRILCISDGSGLCHLKVEVYTLSADCWRELVANIDFLGAGTRFL-KDNFECQYFRGACYWILWDKSVG 231 (396)
Q Consensus 153 ~g~d~~~~~yKVv~~~~~~~~~~~~~~~~evys~~t~~Wr~~~~~~~~~~~~~~~~-~~~~~~v~~~G~lywl~~~~~~~ 231 (396)
+.+ |+.+.--+......... ..+.+++..++..+.+-. .....+. ........-+|.+++.....
T Consensus 292 ~~~-pDg~~l~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~-----~~~~~~~~~~~~~~~spdg~~~~~~~~~--- 357 (741)
T 2ecf_A 292 VNW-RDPQHLSFQRQSRDQKK-----LDLVEVTLASNQQRVLAH-----ETSPTWVPLHNSLRFLDDGSILWSSERT--- 357 (741)
T ss_dssp EEE-EETTEEEEEEEETTSSE-----EEEEEEETTTCCEEEEEE-----EECSSCCCCCSCCEECTTSCEEEEECTT---
T ss_pred EEe-CCCCEEEEEEecccCCe-----EEEEEEECCCCceEEEEE-----cCCCCcCCcCCceEECCCCeEEEEecCC---
Q ss_pred ccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEE
Q 016018 232 INYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLF 311 (396)
Q Consensus 232 ~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~ 311 (396)
....|..+|+.+. ...+.-.. ..-........-++.|.+......... +.||.++-.+ ....
T Consensus 358 -------g~~~l~~~~~~~~-~~~l~~~~---~~v~~~~~~s~dg~~l~~~~~~~~~~~--~~l~~~~~~g-----~~~~ 419 (741)
T 2ecf_A 358 -------GFQHLYRIDSKGK-AAALTHGN---WSVDELLAVDEKAGLAYFRAGIESARE--SQIYAVPLQG-----GQPQ 419 (741)
T ss_dssp -------SSCEEEEECSSSC-EEESCCSS---SCEEEEEEEETTTTEEEEEECSSCTTC--BEEEEEETTC-----CCCE
T ss_pred -------CccEEEEEcCCCC-eeeeeecc---eEEEeEeEEeCCCCEEEEEEeCCCCce--EEEEEEEcCC-----CCee
Q ss_pred EecCCCCcceeEEEEeCCcEEEEecCC-----eEEEEECCCCcEEEE
Q 016018 312 TTEPFCEIKRPLSFCERGELIMEDYYR-----EACSYNLGTKEIKKL 353 (396)
Q Consensus 312 ~i~~~~~~~~p~~~~~~g~il~~~~~~-----~l~~yd~~t~~~~~~ 353 (396)
.+.. ......+.+..+|+.+...... .++.+|.++++++.+
T Consensus 420 ~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 420 RLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp ECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECS
T ss_pred eccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEe
No 143
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=21.63 E-value=6.5e+02 Score=25.58 Aligned_cols=135 Identities=18% Similarity=0.086 Sum_probs=68.5
Q ss_pred ceEEEEEcCCCccccccccccccccccccccCCcceEEE---cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeee
Q 016018 179 LKVEVYTLSADCWRELVANIDFLGAGTRFLKDNFECQYF---RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQK 255 (396)
Q Consensus 179 ~~~evys~~t~~Wr~~~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~ 255 (396)
-.++++++.+..-+.+.. .. +.. ..++.+ +|.|||..... ...|..+++....-..
T Consensus 493 ~~I~v~~ldG~~~~~l~~----~~-----l~~-P~gIaVDp~~g~LYwtD~g~-----------~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFR----EN-----GSK-PRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYS 551 (791)
T ss_dssp TEEEEEETTSSSEEEEEE----CT-----TCC-EEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCCEEE
T ss_pred CeEEEEeCCCCeEEEEEe----CC-----CCC-cceEEEecCCCCEEEecCCC-----------CCeEEEEecCCCceEE
Confidence 467777776554333321 00 111 135666 58999976443 2479999998655443
Q ss_pred ecCCCCccccccccceEEE--ecCeeEEEEeecCCCccEEEEEEEccCCCCCCeEEEEEecCCCCcceeEEEEe-CCcEE
Q 016018 256 LPVPNILNEIDQEFSKLTV--LNESLAFVLRDKYRKSYEIQIWVMDEFGANEIWKKLFTTEPFCEIKRPLSFCE-RGELI 332 (396)
Q Consensus 256 i~lP~~~~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~-~g~il 332 (396)
+-. .. .. .-..|+. .+|+|+++-. . . -.||+.+-.+ ....+. +.....+..|+++.- ++.|+
T Consensus 552 lv~-~~---l~-~P~GLavD~~~~~LYwaD~--~--~--~~I~~~d~dG-~~~~~v---~~~~~~l~~P~glav~~~~lY 616 (791)
T 3m0c_C 552 LVT-EN---IQ-WPNGITLDLLSGRLYWVDS--K--L--HSISSIDVNG-GNRKTI---LEDEKRLAHPFSLAVFEDKVF 616 (791)
T ss_dssp EEC-SS---CS-CEEEEEEETTTTEEEEEET--T--T--TEEEEEETTS-CSCEEE---EECTTTTSSEEEEEEETTEEE
T ss_pred EEe-CC---CC-CceEEEEecCCCeEEEEeC--C--C--CcEEEEecCC-CceEEE---ecCCCccCCCCEEEEeCCEEE
Confidence 311 10 01 1112443 3677777532 2 2 3467776433 222221 111123456776653 34565
Q ss_pred EEec-CCeEEEEECCCCc
Q 016018 333 MEDY-YREACSYNLGTKE 349 (396)
Q Consensus 333 ~~~~-~~~l~~yd~~t~~ 349 (396)
+... .+.|...|..+++
T Consensus 617 wtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 617 WTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEETTTTEEEEEETTTCC
T ss_pred EEECCCCEEEEEeCCCCc
Confidence 5543 4578889876653
No 144
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.74 E-value=85 Score=21.36 Aligned_cols=21 Identities=14% Similarity=-0.080 Sum_probs=16.3
Q ss_pred EEEecCCeEEEEECCCCcEEE
Q 016018 332 IMEDYYREACSYNLGTKEIKK 352 (396)
Q Consensus 332 l~~~~~~~l~~yd~~t~~~~~ 352 (396)
+....+++.|+||..|++-.+
T Consensus 24 ~v~T~dGR~fyyN~~Tk~S~W 44 (73)
T 2dk7_A 24 VVWTGDERVFFYNPTTRLSMW 44 (73)
T ss_dssp EEEESSSCEEEEETTTTEECS
T ss_pred EEECCCCCEEEecCcccceec
Confidence 344568899999999997554
No 145
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=20.36 E-value=4.3e+02 Score=22.96 Aligned_cols=116 Identities=11% Similarity=0.081 Sum_probs=0.0
Q ss_pred cceEEEEEeccCCcccccCCCCccEEEEEeCCCceeeeecCCCCccccccccceEEEecCeeEEEEeecCCCccEEEEEE
Q 016018 218 RGACYWILWDKSVGINYNNLVNGDFIFSFDMSDEVFQKLPVPNILNEIDQEFSKLTVLNESLAFVLRDKYRKSYEIQIWV 297 (396)
Q Consensus 218 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~~~IW~ 297 (396)
+|.+-.-.... ..|..+|+.++.+..+..-. .........-..-+|.+.+.+... .+ +.||-
T Consensus 72 ~g~~l~s~s~D------------~~v~iw~~~~~~~~~~~~~~--~h~~~v~~v~~sp~~~~l~s~s~D--~~--v~iwd 133 (345)
T 3fm0_A 72 CGNYLASASFD------------ATTCIWKKNQDDFECVTTLE--GHENEVKSVAWAPSGNLLATCSRD--KS--VWVWE 133 (345)
T ss_dssp TSSEEEEEETT------------SCEEEEEECCC-EEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT--SC--EEEEE
T ss_pred CCCEEEEEECC------------CcEEEEEccCCCeEEEEEcc--CCCCCceEEEEeCCCCEEEEEECC--Ce--EEEEE
Q ss_pred EccCCCCCCeEEEEEecCCCCcceeEEEEeCCcEEEE-ecCCeEEEEECCCCcEEEEe
Q 016018 298 MDEFGANEIWKKLFTTEPFCEIKRPLSFCERGELIME-DYYREACSYNLGTKEIKKLP 354 (396)
Q Consensus 298 l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~il~~-~~~~~l~~yd~~t~~~~~~~ 354 (396)
++. ...+.....+........-+.+..++.+++. ..++.+..||.+++++..+.
T Consensus 134 ~~~---~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 134 VDE---EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCA 188 (345)
T ss_dssp ECT---TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCC---CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEE
Done!