Query 016020
Match_columns 396
No_of_seqs 41 out of 43
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 06:31:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 99.7 6E-16 2.1E-20 142.2 19.5 181 191-378 86-276 (321)
2 1vyh_C Platelet-activating fac 99.7 3.4E-15 1.2E-19 141.4 23.8 261 87-371 107-401 (410)
3 3ow8_A WD repeat-containing pr 99.7 7.8E-15 2.7E-19 134.8 24.4 252 99-371 49-311 (321)
4 1got_B GT-beta; complex (GTP-b 99.7 3.4E-14 1.2E-18 130.3 27.6 261 89-371 56-333 (340)
5 2ynn_A Coatomer subunit beta'; 99.7 4.6E-14 1.6E-18 127.4 27.1 234 98-354 25-271 (304)
6 4ery_A WD repeat-containing pr 99.6 2.2E-14 7.6E-19 127.7 20.1 178 190-374 28-216 (312)
7 1sq9_A Antiviral protein SKI8; 99.6 3.9E-14 1.3E-18 128.4 21.5 246 89-350 17-330 (397)
8 1vyh_C Platelet-activating fac 99.6 1.9E-14 6.3E-19 136.3 19.7 182 191-379 156-367 (410)
9 2pbi_B Guanine nucleotide-bind 99.6 2E-13 6.9E-18 126.8 25.3 254 99-371 77-347 (354)
10 2ynn_A Coatomer subunit beta'; 99.6 3.1E-14 1E-18 128.6 18.6 180 190-376 18-212 (304)
11 4gqb_B Methylosome protein 50; 99.6 1.3E-14 4.3E-19 136.3 16.7 177 191-371 133-321 (344)
12 4ery_A WD repeat-containing pr 99.6 1.4E-12 4.6E-17 116.2 28.0 255 90-368 25-297 (312)
13 1sq9_A Antiviral protein SKI8; 99.6 9.5E-13 3.2E-17 119.3 27.4 249 87-343 61-395 (397)
14 2ymu_A WD-40 repeat protein; u 99.6 3.6E-13 1.2E-17 128.9 24.4 253 89-371 304-570 (577)
15 1erj_A Transcriptional repress 99.6 5.9E-13 2E-17 124.7 25.4 248 106-374 83-382 (393)
16 1erj_A Transcriptional repress 99.6 1.5E-13 5.2E-18 128.7 20.6 185 190-378 128-338 (393)
17 1gxr_A ESG1, transducin-like e 99.6 6.3E-13 2.2E-17 116.2 23.0 228 100-347 65-301 (337)
18 3v7d_B Cell division control p 99.6 6.4E-13 2.2E-17 124.4 23.8 255 87-352 161-432 (464)
19 3iz6_a 40S ribosomal protein R 99.6 6.6E-13 2.3E-17 123.8 23.5 266 89-371 67-365 (380)
20 3vl1_A 26S proteasome regulato 99.6 2.3E-13 7.7E-18 124.7 19.9 258 98-378 68-362 (420)
21 3k26_A Polycomb protein EED; W 99.6 1.1E-13 3.6E-18 122.5 16.9 271 88-374 18-359 (366)
22 3f3f_A Nucleoporin SEH1; struc 99.6 6.7E-13 2.3E-17 114.7 21.2 146 191-343 17-249 (351)
23 3fm0_A Protein CIAO1; WDR39,SG 99.6 2.7E-13 9.2E-18 124.8 19.9 182 186-374 13-218 (345)
24 3odt_A Protein DOA1; ubiquitin 99.6 1.4E-12 4.9E-17 113.2 23.1 252 89-349 19-303 (313)
25 3zwl_B Eukaryotic translation 99.6 1.9E-12 6.4E-17 114.3 24.1 252 87-350 73-354 (369)
26 4gqb_B Methylosome protein 50; 99.6 7E-13 2.4E-17 124.5 22.4 234 87-344 81-332 (344)
27 2pbi_B Guanine nucleotide-bind 99.6 5.1E-13 1.7E-17 124.1 21.2 141 227-372 155-306 (354)
28 1got_B GT-beta; complex (GTP-b 99.5 3.5E-13 1.2E-17 123.5 19.7 183 191-378 61-254 (340)
29 3gre_A Serine/threonine-protei 99.5 1.7E-12 6E-17 120.5 24.7 225 113-353 48-303 (437)
30 2ymu_A WD-40 repeat protein; u 99.5 2.3E-12 7.9E-17 123.3 26.1 264 88-378 262-536 (577)
31 1r5m_A SIR4-interacting protei 99.5 1E-12 3.5E-17 118.3 22.0 258 89-371 46-351 (425)
32 2xzm_R RACK1; ribosome, transl 99.5 5E-13 1.7E-17 122.3 19.8 179 195-379 36-242 (343)
33 1k8k_C P40, ARP2/3 complex 41 99.5 4.1E-12 1.4E-16 113.4 24.6 224 99-343 21-274 (372)
34 2pm9_A Protein WEB1, protein t 99.5 1.3E-12 4.3E-17 118.9 21.6 244 87-343 66-337 (416)
35 3frx_A Guanine nucleotide-bind 99.5 6.7E-13 2.3E-17 120.9 19.8 179 191-376 23-222 (319)
36 3dwl_C Actin-related protein 2 99.5 2.9E-14 1E-18 129.1 10.7 183 190-377 16-232 (377)
37 3zwl_B Eukaryotic translation 99.5 2.3E-12 7.8E-17 113.8 22.5 267 88-378 32-343 (369)
38 4aez_A CDC20, WD repeat-contai 99.5 6.1E-12 2.1E-16 117.2 26.6 255 99-380 104-379 (401)
39 2hes_X YDR267CP; beta-propelle 99.5 5E-12 1.7E-16 115.7 25.4 235 90-343 16-280 (330)
40 1k8k_C P40, ARP2/3 complex 41 99.5 1E-12 3.6E-17 117.2 20.1 184 190-378 13-230 (372)
41 1r5m_A SIR4-interacting protei 99.5 1E-12 3.5E-17 118.2 20.2 245 88-353 108-392 (425)
42 3gre_A Serine/threonine-protei 99.5 4.6E-13 1.6E-17 124.4 18.4 248 88-352 63-369 (437)
43 3vl1_A 26S proteasome regulato 99.5 2.7E-12 9.2E-17 117.5 23.1 222 98-343 109-365 (420)
44 2pm9_A Protein WEB1, protein t 99.5 4.5E-13 1.5E-17 121.8 17.7 262 105-379 42-335 (416)
45 2ovr_B FBW7, F-BOX/WD repeat p 99.5 4E-12 1.4E-16 119.4 24.7 231 87-349 158-398 (445)
46 1gxr_A ESG1, transducin-like e 99.5 6.7E-12 2.3E-16 109.7 24.0 232 127-379 49-294 (337)
47 4aow_A Guanine nucleotide-bind 99.5 7E-12 2.4E-16 110.5 24.3 243 89-354 39-298 (340)
48 3k26_A Polycomb protein EED; W 99.5 2.2E-12 7.5E-17 114.1 21.0 243 123-382 12-319 (366)
49 1p22_A F-BOX/WD-repeat protein 99.5 4.9E-12 1.7E-16 119.1 24.3 261 90-379 135-412 (435)
50 4aez_A CDC20, WD repeat-contai 99.5 5.2E-12 1.8E-16 117.7 24.2 238 88-347 134-385 (401)
51 3frx_A Guanine nucleotide-bind 99.5 2.4E-12 8.1E-17 117.3 20.9 175 191-372 71-259 (319)
52 4g56_B MGC81050 protein; prote 99.5 9.7E-13 3.3E-17 122.6 18.7 239 82-343 88-343 (357)
53 1yfq_A Cell cycle arrest prote 99.5 1.4E-12 4.7E-17 115.5 18.4 236 90-352 13-292 (342)
54 3i2n_A WD repeat-containing pr 99.5 1.6E-12 5.3E-17 115.1 18.6 217 107-343 43-291 (357)
55 4g56_B MGC81050 protein; prote 99.5 2.3E-13 7.9E-18 126.8 13.9 177 191-371 145-333 (357)
56 3v7d_B Cell division control p 99.5 7.3E-12 2.5E-16 117.2 23.8 184 192-379 169-379 (464)
57 3iz6_a 40S ribosomal protein R 99.5 4.1E-13 1.4E-17 125.2 15.3 183 191-376 72-275 (380)
58 3jrp_A Fusion protein of prote 99.5 3.7E-12 1.3E-16 113.2 19.1 186 191-380 17-239 (379)
59 3mkq_A Coatomer beta'-subunit; 99.5 2E-11 6.8E-16 121.9 26.3 233 98-353 25-270 (814)
60 1l0q_A Surface layer protein; 99.5 2.2E-11 7.4E-16 110.8 24.1 250 101-371 5-265 (391)
61 2aq5_A Coronin-1A; WD40 repeat 99.5 2.4E-12 8.3E-17 119.3 18.0 187 190-380 86-298 (402)
62 2ovr_B FBW7, F-BOX/WD repeat p 99.5 2.1E-11 7.1E-16 114.5 24.4 250 98-379 129-389 (445)
63 3i2n_A WD repeat-containing pr 99.5 3.2E-12 1.1E-16 113.1 17.6 247 119-378 8-288 (357)
64 3ei3_B DNA damage-binding prot 99.5 2E-11 7E-16 111.4 23.3 258 90-369 75-371 (383)
65 4ggc_A P55CDC, cell division c 99.4 1.9E-11 6.5E-16 106.7 21.7 229 105-342 42-314 (318)
66 1p22_A F-BOX/WD-repeat protein 99.4 4.3E-12 1.5E-16 119.5 18.9 169 197-371 182-355 (435)
67 3ei3_B DNA damage-binding prot 99.4 5.7E-12 2E-16 115.0 19.2 181 191-377 79-278 (383)
68 4a11_B DNA excision repair pro 99.4 4.3E-12 1.5E-16 114.0 18.0 267 88-371 43-355 (408)
69 2pm7_B Protein transport prote 99.4 5.8E-12 2E-16 113.3 18.8 174 191-371 15-228 (297)
70 3mmy_A MRNA export factor; mRN 99.4 1.8E-11 6.2E-16 108.0 21.4 246 88-355 39-317 (368)
71 3dwl_C Actin-related protein 2 99.4 3.7E-13 1.3E-17 121.8 10.8 182 190-379 60-280 (377)
72 3fm0_A Protein CIAO1; WDR39,SG 99.4 9.7E-12 3.3E-16 114.5 20.4 147 191-341 67-223 (345)
73 3dm0_A Maltose-binding peripla 99.4 7.4E-12 2.5E-16 125.8 20.0 181 186-372 380-583 (694)
74 3mkq_A Coatomer beta'-subunit; 99.4 1E-11 3.4E-16 124.0 20.4 183 189-378 17-214 (814)
75 2pm7_B Protein transport prote 99.4 6E-12 2E-16 113.2 16.9 241 127-386 7-290 (297)
76 4h5i_A Guanine nucleotide-exch 99.4 1.5E-10 5.3E-15 108.4 26.8 228 100-343 96-343 (365)
77 3bg1_A Protein SEC13 homolog; 99.4 3.6E-12 1.2E-16 115.9 15.2 181 191-378 19-244 (316)
78 4h5i_A Guanine nucleotide-exch 99.4 7.9E-12 2.7E-16 117.1 17.9 178 190-373 138-335 (365)
79 1l0q_A Surface layer protein; 99.4 8.6E-11 2.9E-15 106.9 23.7 228 103-352 49-285 (391)
80 2hes_X YDR267CP; beta-propelle 99.4 2.1E-11 7E-16 111.6 19.6 172 191-371 20-220 (330)
81 4aow_A Guanine nucleotide-bind 99.4 4.2E-10 1.5E-14 99.1 27.0 231 88-342 86-336 (340)
82 4a11_B DNA excision repair pro 99.4 5.4E-11 1.8E-15 106.8 21.5 219 105-343 20-276 (408)
83 3dw8_B Serine/threonine-protei 99.4 2.8E-11 9.6E-16 111.4 20.1 182 190-376 33-311 (447)
84 3dw8_B Serine/threonine-protei 99.4 5.2E-11 1.8E-15 109.6 21.7 243 88-344 28-374 (447)
85 1nr0_A Actin interacting prote 99.4 6.3E-11 2.2E-15 118.1 24.0 257 99-373 72-347 (611)
86 3vu4_A KMHSV2; beta-propeller 99.4 3.4E-11 1.2E-15 111.8 20.4 180 188-378 61-268 (355)
87 3bg1_A Protein SEC13 homolog; 99.4 5.6E-12 1.9E-16 114.7 14.8 186 191-378 63-290 (316)
88 3jrp_A Fusion protein of prote 99.4 5.5E-11 1.9E-15 105.7 20.8 150 191-343 61-240 (379)
89 2xzm_R RACK1; ribosome, transl 99.4 9.8E-11 3.4E-15 107.1 22.5 154 191-349 82-252 (343)
90 2aq5_A Coronin-1A; WD40 repeat 99.4 1.9E-11 6.4E-16 113.3 17.8 188 188-380 37-253 (402)
91 3lrv_A PRE-mRNA-splicing facto 99.4 1.4E-11 4.9E-16 112.3 16.8 169 201-374 88-287 (343)
92 3dm0_A Maltose-binding peripla 99.4 4.6E-11 1.6E-15 120.1 21.9 233 126-372 379-624 (694)
93 2w18_A PALB2, fancn, partner a 99.4 1.1E-11 3.7E-16 123.0 16.6 151 192-342 185-356 (356)
94 4ggc_A P55CDC, cell division c 99.4 5.9E-11 2E-15 103.6 19.3 145 191-343 31-181 (318)
95 1pgu_A Actin interacting prote 99.4 6.9E-11 2.4E-15 112.7 21.3 263 90-371 300-604 (615)
96 1pgu_A Actin interacting prote 99.4 8.6E-11 2.9E-15 112.0 21.9 264 90-379 208-570 (615)
97 3sfz_A APAF-1, apoptotic pepti 99.4 4.7E-11 1.6E-15 126.1 21.8 157 187-349 614-781 (1249)
98 1nr0_A Actin interacting prote 99.3 2E-11 6.9E-16 121.7 17.5 181 191-378 65-267 (611)
99 2oaj_A Protein SNI1; WD40 repe 99.3 1.6E-11 5.6E-16 130.5 17.7 181 190-379 22-240 (902)
100 3lrv_A PRE-mRNA-splicing facto 99.3 1.3E-11 4.4E-16 112.6 14.3 171 197-374 47-238 (343)
101 4gga_A P55CDC, cell division c 99.3 2.3E-10 7.9E-15 107.5 23.2 241 90-352 149-405 (420)
102 3sfz_A APAF-1, apoptotic pepti 99.3 1.7E-10 6E-15 121.7 24.6 262 88-371 615-903 (1249)
103 4e54_B DNA damage-binding prot 99.3 7.4E-11 2.5E-15 111.7 19.3 158 190-353 169-338 (435)
104 4e54_B DNA damage-binding prot 99.3 1.3E-11 4.5E-16 116.8 14.0 177 191-374 125-320 (435)
105 3f3f_A Nucleoporin SEH1; struc 99.3 4.4E-11 1.5E-15 103.4 16.0 151 190-343 62-337 (351)
106 2xyi_A Probable histone-bindin 99.3 1.3E-10 4.6E-15 110.0 20.3 183 188-376 184-405 (430)
107 3bws_A Protein LP49; two-domai 99.3 5.6E-10 1.9E-14 102.9 23.8 233 90-343 171-432 (433)
108 3odt_A Protein DOA1; ubiquitin 99.3 2E-09 6.9E-14 93.3 25.8 176 190-378 64-252 (313)
109 3bws_A Protein LP49; two-domai 99.3 5.6E-10 1.9E-14 102.9 23.5 236 99-352 135-400 (433)
110 2xyi_A Probable histone-bindin 99.3 6.1E-11 2.1E-15 112.4 17.1 242 88-347 128-414 (430)
111 2vdu_B TRNA (guanine-N(7)-)-me 99.3 1.8E-10 6E-15 109.3 20.0 205 131-352 104-354 (450)
112 4gga_A P55CDC, cell division c 99.3 4.5E-10 1.5E-14 105.5 22.3 258 102-379 119-393 (420)
113 2vdu_B TRNA (guanine-N(7)-)-me 99.3 7.1E-11 2.4E-15 112.0 16.2 157 190-351 107-280 (450)
114 3jro_A Fusion protein of prote 99.3 1E-09 3.5E-14 113.1 24.4 193 190-385 58-289 (753)
115 1yfq_A Cell cycle arrest prote 99.3 2.2E-10 7.6E-15 101.3 16.8 230 126-378 8-279 (342)
116 3jro_A Fusion protein of prote 99.2 1.7E-10 5.7E-15 118.9 17.8 186 191-380 15-237 (753)
117 3mmy_A MRNA export factor; mRN 99.2 2.1E-10 7.1E-15 101.2 15.7 116 190-311 44-169 (368)
118 2j04_B YDR362CP, TAU91; beta p 99.2 6.1E-11 2.1E-15 119.6 13.7 177 190-372 212-419 (524)
119 3u4y_A Uncharacterized protein 99.2 1.4E-08 4.7E-13 90.3 26.2 232 101-352 13-264 (331)
120 3vu4_A KMHSV2; beta-propeller 99.2 8.8E-10 3E-14 102.3 19.0 212 100-343 33-271 (355)
121 1pby_B Quinohemoprotein amine 99.2 3.4E-09 1.2E-13 92.9 21.4 254 99-376 2-306 (337)
122 4gq1_A NUP37; propeller, trans 99.2 2.5E-10 8.6E-15 107.4 14.8 176 197-374 155-383 (393)
123 3vgz_A Uncharacterized protein 99.2 1.2E-08 4.2E-13 90.6 24.7 182 186-369 89-291 (353)
124 4gq1_A NUP37; propeller, trans 99.2 5.1E-10 1.7E-14 105.3 15.6 159 190-353 93-297 (393)
125 2w18_A PALB2, fancn, partner a 99.1 1.3E-09 4.6E-14 108.0 18.2 133 187-328 49-241 (356)
126 2oaj_A Protein SNI1; WD40 repe 99.1 7.7E-10 2.7E-14 117.7 14.8 151 190-346 63-246 (902)
127 3vgz_A Uncharacterized protein 99.1 3.3E-08 1.1E-12 87.7 22.7 228 107-351 68-312 (353)
128 1nir_A Nitrite reductase; hemo 99.1 3.2E-08 1.1E-12 99.5 25.1 253 98-368 149-439 (543)
129 2j04_B YDR362CP, TAU91; beta p 99.1 2.8E-10 9.4E-15 114.8 9.6 155 190-349 271-434 (524)
130 2j04_A TAU60, YPL007P, hypothe 99.1 2.8E-09 9.5E-14 111.7 17.1 173 190-372 90-289 (588)
131 1pby_B Quinohemoprotein amine 99.0 1.1E-08 3.7E-13 89.7 17.5 246 105-366 53-334 (337)
132 1ri6_A Putative isomerase YBHE 99.0 4.6E-07 1.6E-11 79.6 26.2 224 105-342 12-261 (343)
133 3hfq_A Uncharacterized protein 99.0 4E-07 1.4E-11 82.1 26.3 182 184-369 84-305 (347)
134 1jmx_B Amine dehydrogenase; ox 99.0 3.9E-08 1.3E-12 86.9 18.6 228 99-351 12-334 (349)
135 2oit_A Nucleoporin 214KDA; NH2 99.0 2.2E-08 7.7E-13 97.4 18.2 182 190-379 97-322 (434)
136 2oit_A Nucleoporin 214KDA; NH2 98.9 2.5E-08 8.6E-13 97.0 15.9 163 190-354 41-234 (434)
137 1nir_A Nitrite reductase; hemo 98.9 4.9E-08 1.7E-12 98.2 18.0 150 186-343 139-311 (543)
138 3u4y_A Uncharacterized protein 98.8 4.3E-07 1.5E-11 80.6 20.3 145 193-343 5-160 (331)
139 2j04_A TAU60, YPL007P, hypothe 98.8 1.1E-07 3.9E-12 99.7 18.6 212 108-342 64-296 (588)
140 1ri6_A Putative isomerase YBHE 98.8 7.1E-07 2.4E-11 78.3 20.7 155 185-343 37-209 (343)
141 1xfd_A DIP, dipeptidyl aminope 98.8 6.8E-08 2.3E-12 95.9 15.3 158 160-333 2-192 (723)
142 2ojh_A Uncharacterized protein 98.8 1.3E-06 4.5E-11 74.1 20.4 221 108-353 22-271 (297)
143 2hqs_A Protein TOLB; TOLB, PAL 98.8 4.3E-07 1.5E-11 86.9 19.1 160 188-353 225-397 (415)
144 1jmx_B Amine dehydrogenase; ox 98.8 3.2E-07 1.1E-11 81.1 16.4 148 197-352 10-185 (349)
145 3fvz_A Peptidyl-glycine alpha- 98.7 4E-06 1.4E-10 76.9 23.4 224 107-344 68-323 (329)
146 2hqs_A Protein TOLB; TOLB, PAL 98.7 4.3E-07 1.5E-11 86.9 17.3 156 189-352 182-353 (415)
147 3scy_A Hypothetical bacterial 98.7 2.2E-06 7.4E-11 78.0 19.8 152 186-342 155-336 (361)
148 3scy_A Hypothetical bacterial 98.7 1E-05 3.4E-10 73.6 24.2 178 186-368 100-324 (361)
149 3hfq_A Uncharacterized protein 98.7 5.7E-06 1.9E-10 74.6 21.9 154 185-342 140-316 (347)
150 3o4h_A Acylamino-acid-releasin 98.6 1.1E-07 3.6E-12 93.3 10.2 230 100-351 35-283 (582)
151 3dsm_A Uncharacterized protein 98.6 7.3E-06 2.5E-10 75.8 21.5 241 92-350 47-309 (328)
152 2ojh_A Uncharacterized protein 98.6 6E-07 2.1E-11 76.1 12.5 174 188-367 44-233 (297)
153 1jof_A Carboxy-CIS,CIS-muconat 98.6 2.3E-06 7.9E-11 79.2 17.3 177 185-366 144-364 (365)
154 2ecf_A Dipeptidyl peptidase IV 98.5 6.9E-07 2.4E-11 89.2 13.3 174 189-371 112-357 (741)
155 1xfd_A DIP, dipeptidyl aminope 98.5 7.9E-07 2.7E-11 88.3 13.1 158 187-350 62-297 (723)
156 1q7f_A NHL, brain tumor CG1071 98.5 1.4E-05 4.6E-10 70.4 19.3 186 183-376 27-234 (286)
157 1q7f_A NHL, brain tumor CG1071 98.5 1.7E-05 5.8E-10 69.8 19.9 180 184-368 75-268 (286)
158 2z3z_A Dipeptidyl aminopeptida 98.5 1.4E-06 4.9E-11 86.7 14.6 149 186-343 82-293 (706)
159 1z68_A Fibroblast activation p 98.4 2.3E-07 8E-12 92.7 7.3 177 188-370 62-333 (719)
160 3o4h_A Acylamino-acid-releasin 98.4 3.2E-06 1.1E-10 82.8 14.8 171 191-371 27-215 (582)
161 2z3z_A Dipeptidyl aminopeptida 98.4 3.2E-06 1.1E-10 84.1 14.8 147 171-332 11-199 (706)
162 1z68_A Fibroblast activation p 98.4 1.1E-06 3.8E-11 87.9 11.5 155 163-333 4-188 (719)
163 3no2_A Uncharacterized protein 98.4 1.1E-05 3.6E-10 74.1 16.8 180 198-386 5-201 (276)
164 2ecf_A Dipeptidyl peptidase IV 98.4 3.1E-06 1E-10 84.6 13.7 139 185-333 36-228 (741)
165 3fvz_A Peptidyl-glycine alpha- 98.4 5.2E-06 1.8E-10 76.2 14.2 184 183-371 88-312 (329)
166 3e5z_A Putative gluconolactona 98.4 2E-05 6.7E-10 70.1 16.8 181 186-370 69-277 (296)
167 2oiz_A Aromatic amine dehydrog 98.3 0.00078 2.7E-08 63.4 27.2 228 107-349 30-343 (361)
168 3dsm_A Uncharacterized protein 98.3 7.5E-05 2.6E-09 69.0 19.5 156 188-350 46-220 (328)
169 1k32_A Tricorn protease; prote 98.3 2.1E-05 7.2E-10 83.7 17.4 156 187-353 297-471 (1045)
170 1jof_A Carboxy-CIS,CIS-muconat 98.2 4.1E-05 1.4E-09 70.9 16.7 155 185-342 39-223 (365)
171 3hrp_A Uncharacterized protein 98.2 6.3E-05 2.1E-09 72.9 18.0 164 180-347 125-302 (409)
172 1k32_A Tricorn protease; prote 98.2 1E-05 3.5E-10 86.0 12.5 165 191-368 250-438 (1045)
173 3azo_A Aminopeptidase; POP fam 98.1 3.6E-05 1.2E-09 76.0 13.6 161 187-352 131-334 (662)
174 2gop_A Trilobed protease; beta 98.1 0.00069 2.4E-08 60.6 20.7 191 132-345 61-294 (347)
175 3no2_A Uncharacterized protein 98.1 0.00031 1.1E-08 64.4 18.7 174 187-369 38-231 (276)
176 1rwi_B Serine/threonine-protei 98.1 0.00014 4.8E-09 62.7 15.4 181 184-371 65-254 (270)
177 4a5s_A Dipeptidyl peptidase 4 97.9 6.9E-05 2.3E-09 76.7 13.1 147 191-343 67-294 (740)
178 4a5s_A Dipeptidyl peptidase 4 97.9 0.00014 4.8E-09 74.4 15.3 154 161-331 3-188 (740)
179 2z2n_A Virginiamycin B lyase; 97.9 0.0049 1.7E-07 53.1 22.7 260 90-376 16-291 (299)
180 3pe7_A Oligogalacturonate lyas 97.9 0.00022 7.6E-09 64.6 14.8 159 191-351 86-284 (388)
181 1xip_A Nucleoporin NUP159; bet 97.9 0.00026 8.8E-09 70.2 16.0 178 188-384 40-239 (388)
182 2gop_A Trilobed protease; beta 97.9 0.00014 4.7E-09 65.1 12.7 127 197-333 23-189 (347)
183 3c5m_A Oligogalacturonate lyas 97.8 6.3E-05 2.2E-09 67.8 9.4 151 191-343 86-273 (396)
184 2qe8_A Uncharacterized protein 97.8 0.00036 1.2E-08 64.6 14.2 186 183-371 64-311 (343)
185 1rwi_B Serine/threonine-protei 97.8 0.00053 1.8E-08 59.1 14.0 175 187-371 25-212 (270)
186 2dg1_A DRP35, lactonase; beta 97.8 0.0027 9.2E-08 56.7 18.9 164 186-352 87-272 (333)
187 2dg1_A DRP35, lactonase; beta 97.7 0.0015 5.1E-08 58.4 16.5 158 185-347 44-219 (333)
188 2hz6_A Endoplasmic reticulum t 97.7 4.5E-05 1.5E-09 72.5 6.7 179 199-387 10-199 (369)
189 3g4e_A Regucalcin; six bladed 97.7 0.0018 6.3E-08 58.4 16.9 163 186-353 54-240 (297)
190 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0076 2.6E-07 55.4 21.3 248 94-375 99-373 (376)
191 2bkl_A Prolyl endopeptidase; m 97.7 0.026 8.9E-07 57.3 26.5 202 131-349 122-357 (695)
192 2xdw_A Prolyl endopeptidase; a 97.6 0.00066 2.3E-08 69.0 14.1 150 190-343 129-320 (710)
193 3e5z_A Putative gluconolactona 97.6 0.0089 3E-07 52.9 19.3 178 183-368 25-235 (296)
194 1qks_A Cytochrome CD1 nitrite 97.6 0.0017 5.7E-08 66.7 16.3 145 193-343 163-329 (567)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 97.5 0.0081 2.8E-07 52.7 17.9 180 186-370 71-288 (314)
196 2z2n_A Virginiamycin B lyase; 97.5 0.014 4.9E-07 50.2 18.7 173 185-368 56-242 (299)
197 3azo_A Aminopeptidase; POP fam 97.5 0.061 2.1E-06 53.1 25.3 215 129-352 129-379 (662)
198 3dr2_A Exported gluconolactona 97.5 0.0063 2.1E-07 54.9 16.9 179 187-372 87-299 (305)
199 2oiz_A Aromatic amine dehydrog 97.4 0.0031 1.1E-07 59.3 15.2 135 206-343 29-182 (361)
200 3c5m_A Oligogalacturonate lyas 97.4 0.00078 2.7E-08 60.6 10.4 151 188-344 38-226 (396)
201 3pe7_A Oligogalacturonate lyas 97.4 0.0015 5.3E-08 59.1 12.3 146 192-344 42-226 (388)
202 2qc5_A Streptogramin B lactona 97.4 0.033 1.1E-06 47.9 19.4 175 185-370 61-249 (300)
203 2ghs_A AGR_C_1268P; regucalcin 97.3 0.029 1E-06 51.6 20.1 161 187-352 91-269 (326)
204 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.095 3.3E-06 48.1 26.3 261 96-386 51-343 (376)
205 2xdw_A Prolyl endopeptidase; a 97.3 0.047 1.6E-06 55.4 22.8 206 131-351 126-377 (710)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 97.2 0.092 3.1E-06 45.9 22.4 222 105-343 43-299 (314)
207 1qks_A Cytochrome CD1 nitrite 97.1 0.022 7.6E-07 58.4 18.1 179 187-368 198-407 (567)
208 1npe_A Nidogen, entactin; glyc 97.1 0.02 6.7E-07 50.5 15.5 179 185-369 35-226 (267)
209 2bkl_A Prolyl endopeptidase; m 97.1 0.0019 6.5E-08 65.6 10.1 150 189-343 124-304 (695)
210 2qc5_A Streptogramin B lactona 97.1 0.13 4.3E-06 44.3 25.4 237 106-369 39-290 (300)
211 1yr2_A Prolyl oligopeptidase; 97.1 0.0061 2.1E-07 62.5 13.5 149 190-343 167-350 (741)
212 2mad_H Methylamine dehydrogena 97.0 0.044 1.5E-06 52.5 17.8 132 209-346 48-199 (373)
213 3hxj_A Pyrrolo-quinoline quino 97.0 0.1 3.6E-06 45.9 18.8 254 97-385 29-288 (330)
214 1yr2_A Prolyl oligopeptidase; 96.9 0.17 5.9E-06 51.8 23.0 202 131-349 164-401 (741)
215 1kb0_A Quinohemoprotein alcoho 96.8 0.11 3.7E-06 54.0 20.4 144 186-334 313-540 (677)
216 3hrp_A Uncharacterized protein 96.7 0.061 2.1E-06 52.0 16.4 158 185-347 171-359 (409)
217 2iwa_A Glutamine cyclotransfer 96.6 0.26 9E-06 46.5 20.1 181 191-379 26-226 (266)
218 2fp8_A Strictosidine synthase; 96.6 0.26 9E-06 44.6 18.9 191 185-380 79-312 (322)
219 2mad_H Methylamine dehydrogena 96.5 0.03 1E-06 53.6 13.1 108 237-348 32-162 (373)
220 1npe_A Nidogen, entactin; glyc 96.5 0.29 1E-05 43.0 18.3 163 184-350 77-246 (267)
221 2qe8_A Uncharacterized protein 96.5 0.044 1.5E-06 50.6 13.5 123 186-311 17-163 (343)
222 3mbr_X Glutamine cyclotransfer 96.4 0.36 1.2E-05 45.4 19.3 175 191-375 26-221 (243)
223 3v65_B Low-density lipoprotein 96.4 0.11 3.9E-06 49.7 16.2 182 183-369 113-306 (386)
224 3nok_A Glutaminyl cyclase; bet 96.3 0.14 4.7E-06 49.1 16.3 175 191-375 60-252 (268)
225 3hxj_A Pyrrolo-quinoline quino 96.3 0.13 4.5E-06 45.3 15.0 166 197-375 147-319 (330)
226 3v64_C Agrin; beta propeller, 96.3 0.15 5.2E-06 48.1 16.3 181 184-369 71-263 (349)
227 3dr2_A Exported gluconolactona 96.3 0.55 1.9E-05 42.1 19.2 185 184-376 43-263 (305)
228 3nol_A Glutamine cyclotransfer 96.2 0.42 1.4E-05 45.5 18.9 154 191-354 48-213 (262)
229 3sjl_D Methylamine dehydrogena 96.1 0.31 1.1E-05 48.3 18.1 142 197-343 44-208 (386)
230 3g4e_A Regucalcin; six bladed 96.1 0.4 1.4E-05 43.0 17.2 179 184-370 11-218 (297)
231 3tc9_A Hypothetical hydrolase; 96.0 0.3 1E-05 47.8 17.3 161 181-344 132-302 (430)
232 3iuj_A Prolyl endopeptidase; h 95.9 0.099 3.4E-06 53.5 13.6 150 191-343 134-314 (693)
233 3c75_H MADH, methylamine dehyd 95.8 1.7 5.8E-05 43.4 23.3 235 108-349 99-409 (426)
234 3p5b_L Low density lipoprotein 95.8 0.77 2.6E-05 44.3 19.1 194 184-380 110-320 (400)
235 1mda_H Methylamine dehydrogena 95.7 0.041 1.4E-06 53.7 9.8 122 240-364 34-187 (368)
236 2ghs_A AGR_C_1268P; regucalcin 95.7 0.59 2E-05 42.8 17.0 147 186-342 49-209 (326)
237 1xip_A Nucleoporin NUP159; bet 95.7 0.16 5.4E-06 50.3 14.0 131 188-334 90-234 (388)
238 2ad6_A Methanol dehydrogenase 95.7 0.94 3.2E-05 46.1 20.0 84 250-335 444-528 (571)
239 1kb0_A Quinohemoprotein alcoho 95.6 1.5 5.2E-05 45.4 21.2 74 293-367 457-536 (677)
240 3c75_H MADH, methylamine dehyd 95.5 0.33 1.1E-05 48.5 15.5 139 198-341 85-246 (426)
241 1w6s_A Methanol dehydrogenase 95.5 1.4 4.7E-05 45.7 20.6 81 250-334 453-536 (599)
242 2hz6_A Endoplasmic reticulum t 95.5 0.0075 2.6E-07 57.2 3.3 189 97-310 8-200 (369)
243 1ijq_A LDL receptor, low-densi 95.4 1.3 4.5E-05 40.8 18.1 182 184-369 28-226 (316)
244 3sjl_D Methylamine dehydrogena 95.3 0.15 5.2E-06 50.6 12.4 151 187-344 80-257 (386)
245 3iuj_A Prolyl endopeptidase; h 95.2 2.8 9.5E-05 42.8 21.6 199 131-347 130-363 (693)
246 1mda_H Methylamine dehydrogena 95.1 2.7 9.1E-05 40.9 20.8 73 276-350 269-354 (368)
247 2iwa_A Glutamine cyclotransfer 94.9 0.53 1.8E-05 44.4 14.0 147 218-368 9-168 (266)
248 3qqz_A Putative uncharacterize 94.7 2.7 9.3E-05 39.2 22.1 188 187-379 28-252 (255)
249 3sov_A LRP-6, low-density lipo 94.6 1.1 3.9E-05 41.9 15.6 179 185-368 34-225 (318)
250 1n7d_A LDL receptor, low-densi 94.5 0.15 5.2E-06 53.3 10.3 183 184-370 404-603 (699)
251 3m0c_C LDL receptor, low-densi 94.4 2.8 9.6E-05 45.0 20.0 193 184-380 422-632 (791)
252 3v65_B Low-density lipoprotein 94.3 1.7 5.8E-05 41.5 16.3 163 183-350 156-326 (386)
253 3mbr_X Glutamine cyclotransfer 94.1 2.1 7.1E-05 40.2 16.1 137 227-368 21-166 (243)
254 2ad6_A Methanol dehydrogenase 94.0 5.2 0.00018 40.6 20.1 59 292-350 443-502 (571)
255 1yiq_A Quinohemoprotein alcoho 94.0 0.72 2.5E-05 47.9 14.0 74 293-367 455-534 (689)
256 4hw6_A Hypothetical protein, I 94.0 2.4 8.1E-05 41.6 16.9 157 184-343 137-304 (433)
257 1flg_A Protein (quinoprotein e 93.9 1.4 4.7E-05 45.1 15.7 144 186-334 321-549 (582)
258 1ijq_A LDL receptor, low-densi 93.6 4.3 0.00015 37.3 17.6 173 205-380 7-194 (316)
259 1kv9_A Type II quinohemoprotei 93.6 7.6 0.00026 40.1 23.6 81 250-334 438-521 (668)
260 3v64_C Agrin; beta propeller, 93.4 2.9 9.9E-05 39.3 15.8 162 184-350 114-283 (349)
261 2p4o_A Hypothetical protein; p 93.1 4.7 0.00016 36.3 20.5 174 186-369 32-230 (306)
262 3p5b_L Low density lipoprotein 92.5 4.6 0.00016 38.9 16.1 162 183-349 156-327 (400)
263 3s94_A LRP-6, low-density lipo 92.3 6.3 0.00022 40.7 17.9 181 183-368 37-230 (619)
264 1yiq_A Quinohemoprotein alcoho 92.0 2.9 9.9E-05 43.4 14.9 81 250-334 455-538 (689)
265 3s94_A LRP-6, low-density lipo 91.6 7.5 0.00026 40.1 17.5 156 185-344 348-511 (619)
266 3kya_A Putative phosphatase; s 91.6 4.5 0.00015 41.5 15.6 162 181-344 134-342 (496)
267 3nol_A Glutamine cyclotransfer 91.0 3.3 0.00011 39.3 13.1 137 227-368 43-188 (262)
268 2fp8_A Strictosidine synthase; 90.1 10 0.00035 34.1 16.8 155 183-344 16-217 (322)
269 2xe4_A Oligopeptidase B; hydro 90.0 2.3 8E-05 44.3 12.0 150 189-342 177-353 (751)
270 1kv9_A Type II quinohemoprotei 89.6 21 0.00071 36.8 19.1 186 97-306 65-337 (668)
271 3m0c_C LDL receptor, low-densi 88.9 20 0.00068 38.5 18.4 161 183-348 468-638 (791)
272 4a0p_A LRP6, LRP-6, low-densit 88.4 23 0.00079 36.6 18.1 156 185-344 339-509 (628)
273 2p4o_A Hypothetical protein; p 88.2 14 0.00048 33.2 18.6 180 187-371 73-279 (306)
274 3nok_A Glutaminyl cyclase; bet 88.1 5 0.00017 38.4 11.9 132 229-368 57-197 (268)
275 3sov_A LRP-6, low-density lipo 87.9 17 0.0006 33.8 16.6 161 183-348 76-244 (318)
276 1n7d_A LDL receptor, low-densi 87.4 2.7 9.3E-05 43.9 10.4 164 183-351 450-623 (699)
277 2ece_A 462AA long hypothetical 87.0 6.9 0.00024 40.2 12.9 142 198-342 96-288 (462)
278 1fwx_A Nitrous oxide reductase 86.4 5.4 0.00018 42.1 12.0 173 207-383 174-412 (595)
279 3amr_A 3-phytase; beta-propell 86.4 27 0.00094 34.6 18.5 149 200-350 89-272 (355)
280 3amr_A 3-phytase; beta-propell 86.4 12 0.0004 37.2 13.8 147 194-382 37-211 (355)
281 2ece_A 462AA long hypothetical 85.1 4.8 0.00017 41.3 10.7 151 187-342 139-351 (462)
282 4a0p_A LRP6, LRP-6, low-densit 84.9 24 0.00081 36.6 15.8 155 185-344 36-198 (628)
283 4a2l_A BT_4663, two-component 81.4 52 0.0018 33.8 20.3 231 89-344 88-340 (795)
284 4hw6_A Hypothetical protein, I 78.2 41 0.0014 32.7 14.1 218 108-341 162-431 (433)
285 3tc9_A Hypothetical hydrolase; 76.1 59 0.002 31.5 22.1 228 100-341 151-428 (430)
286 3v9f_A Two-component system se 73.5 85 0.0029 32.1 16.9 143 223-372 403-560 (781)
287 3a9g_A Putative uncharacterize 66.7 26 0.00087 33.2 9.3 65 276-344 34-115 (354)
288 2xe4_A Oligopeptidase B; hydro 64.2 1.4E+02 0.0048 31.0 18.1 149 189-339 224-394 (751)
289 2ism_A Putative oxidoreductase 60.3 42 0.0014 31.5 9.4 90 275-368 35-152 (352)
290 4a2l_A BT_4663, two-component 58.0 1.7E+02 0.0058 30.0 19.8 143 197-350 462-621 (795)
291 2kr7_A FKBP-type peptidyl-prol 57.8 6.1 0.00021 34.1 2.9 61 217-278 77-137 (151)
292 3mez_B Mannose-specific lectin 57.4 30 0.001 28.0 6.8 60 282-342 23-83 (113)
293 1fwx_A Nitrous oxide reductase 52.9 2E+02 0.0069 30.3 13.9 136 186-327 277-457 (595)
294 2lcj_A PAB POLC intein; hydrol 52.0 53 0.0018 28.7 8.0 47 199-245 48-100 (185)
295 3qqz_A Putative uncharacterize 50.3 1.6E+02 0.0053 27.2 16.3 102 227-333 121-242 (255)
296 4h3o_A Lectin; cadmium, plant 50.2 46 0.0016 26.6 6.8 47 282-330 18-66 (105)
297 3v9f_A Two-component system se 47.7 2.4E+02 0.0083 28.7 14.4 139 227-371 450-603 (781)
298 3ei3_A DNA damage-binding prot 46.5 3.6E+02 0.012 30.3 15.7 149 192-343 421-591 (1158)
299 3f7f_A Nucleoporin NUP120; nuc 45.0 47 0.0016 36.1 7.7 60 283-343 231-305 (729)
300 3sre_A PON1, serum paraoxonase 44.7 66 0.0023 31.3 8.2 78 292-369 82-183 (355)
301 4dt4_A FKBP-type 16 kDa peptid 43.8 9.6 0.00033 33.9 1.9 60 218-278 96-156 (169)
302 2ism_A Putative oxidoreductase 43.6 2.1E+02 0.0071 26.7 15.4 49 185-237 30-85 (352)
303 3a9g_A Putative uncharacterize 40.3 86 0.0029 29.5 8.1 37 308-344 23-59 (354)
304 3cgm_A SLYD, peptidyl-prolyl C 39.8 11 0.00039 32.8 1.7 61 217-278 67-128 (158)
305 3kya_A Putative phosphatase; s 39.6 3.2E+02 0.011 27.8 22.1 232 107-344 161-476 (496)
306 1flg_A Protein (quinoprotein e 36.9 3.5E+02 0.012 27.4 24.3 57 250-307 291-360 (582)
307 3s25_A Hypothetical 7-bladed b 34.9 2.8E+02 0.0096 25.7 13.7 146 185-343 15-176 (302)
308 3ei3_A DNA damage-binding prot 34.2 5.4E+02 0.018 28.8 18.4 63 282-344 935-1000(1158)
309 1w6s_A Methanol dehydrogenase 31.4 4.5E+02 0.015 27.0 22.7 187 97-307 61-347 (599)
310 3q6k_A 43.2 kDa salivary prote 31.3 2.5E+02 0.0084 27.8 9.9 77 251-328 124-216 (381)
311 2g8s_A Glucose/sorbosone dehyd 30.9 2.5E+02 0.0084 26.2 9.5 71 271-343 18-107 (353)
312 3dzw_A Agglutinin; lectin, man 30.5 1.4E+02 0.0047 23.7 6.7 57 282-341 18-75 (109)
313 3s9j_A Member of DUF4221 famil 29.0 1.1E+02 0.0038 30.0 7.0 67 281-348 36-115 (369)
314 1cru_A Protein (soluble quinop 28.7 83 0.0028 31.0 6.1 60 310-369 23-99 (454)
315 3mez_A Mannose-specific lectin 28.1 55 0.0019 26.3 3.9 56 282-340 19-75 (111)
316 2auk_A DNA-directed RNA polyme 27.6 62 0.0021 29.1 4.5 70 183-267 11-82 (190)
317 2be1_A Serine/threonine-protei 27.3 4.3E+02 0.015 25.5 14.7 175 204-385 16-236 (339)
318 2g8s_A Glucose/sorbosone dehyd 26.7 50 0.0017 31.0 3.9 37 310-346 14-51 (353)
319 1suu_A DNA gyrase subunit A; t 22.8 4.7E+02 0.016 24.4 15.0 81 93-180 3-91 (312)
320 2k8i_A SLYD, peptidyl-prolyl C 22.6 26 0.00088 31.0 1.0 57 220-278 75-132 (171)
321 2kfw_A FKBP-type peptidyl-prol 22.6 18 0.0006 32.9 -0.1 58 219-278 74-132 (196)
322 3r0e_B Lectin; carbohydrate bi 22.6 1.3E+02 0.0046 23.9 5.3 56 283-342 24-80 (110)
323 2p9w_A MAL S 1 allergenic prot 21.8 5.6E+02 0.019 25.0 15.0 83 185-267 12-120 (334)
324 3l6v_A GYRA, DNA gyrase subuni 21.8 5.1E+02 0.017 25.2 10.1 118 93-219 2-134 (370)
325 1cru_A Protein (soluble quinop 21.6 5.8E+02 0.02 25.0 14.0 52 184-236 25-86 (454)
326 4gq2_M Nucleoporin NUP120; bet 21.5 1.9E+02 0.0065 31.5 7.7 55 206-260 255-318 (950)
327 4fhn_B Nucleoporin NUP120; pro 20.8 2.4E+02 0.0081 31.1 8.3 27 282-308 248-274 (1139)
328 2vnl_A Bifunctional tail prote 20.4 2.7E+02 0.0092 24.9 7.0 74 276-355 20-108 (151)
329 3q6k_A 43.2 kDa salivary prote 20.2 6.3E+02 0.021 24.9 16.0 47 323-370 285-343 (381)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.71 E-value=6e-16 Score=142.23 Aligned_cols=181 Identities=17% Similarity=0.282 Sum_probs=153.1
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
+.|.+ ++.+++..+.|+++|+||+.+.+++.++.. ..+..+.+||+-..|+.... ...++||++++|+....+.
T Consensus 86 ~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~--dg~v~i~~~~~~~~~~~~~- 161 (321)
T 3ow8_A 86 VDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH--VGKVNIFGVESGKKEYSLD- 161 (321)
T ss_dssp EEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT--TSEEEEEETTTCSEEEEEE-
T ss_pred EEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC--CCcEEEEEcCCCceeEEec-
Confidence 56776 788999999999999999999999999876 67889999988777777665 5678999999999988876
Q ss_pred ecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-
Q 016020 269 LLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG- 343 (396)
Q Consensus 269 ~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g- 343 (396)
.+... +.|.+ .+.+|++...|+.|+|||+.+++++.+...+..++.+.-|.+++++++|-+. |+|.+||++.
T Consensus 162 --~~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 162 --TRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp --CSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred --CCCceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 44443 78887 8999999999999999999999999999999999999999999999999887 8999999987
Q ss_pred ceeeeeccccccCCC---CCCCcEEEccCCcEEEEecc
Q 016020 344 ELVTSFEDHLLWHPD---CNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 344 eL~t~fedh~l~~~~---c~~n~~~it~~qd~ii~~~~ 378 (396)
+++..+..|..+... +|++++++|+..|=-|....
T Consensus 239 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd 276 (321)
T 3ow8_A 239 NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 276 (321)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEe
Confidence 788899988766433 77888888877664444333
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.70 E-value=3.4e-15 Score=141.36 Aligned_cols=261 Identities=11% Similarity=0.183 Sum_probs=191.9
Q ss_pred cccceEEEeecc--chhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeee
Q 016020 87 KRTKVIEIVAAR--DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (396)
Q Consensus 87 ~RS~V~EIv~a~--dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~ 164 (396)
-+.+|.-+.+.. .+++.-...|....||..+++.+..+.. +..-|.++=++....-|++.| .|. .+ +.-+
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs---~D~--~i--~iwd 178 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCS---ADM--TI--KLWD 178 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEE---TTS--CC--CEEE
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEe---CCC--eE--EEEe
Confidence 456777777663 4677777889999999999999988875 445678888887666555533 222 22 2222
Q ss_pred hhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeE
Q 016020 165 IEYIRRGKPDSGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIM 239 (396)
Q Consensus 165 ~~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~ 239 (396)
+ ..++ .+-. .-.|.+ -+.|.+ +|..++..+.|+.+++||+++..++.++.+ ..|..+.++|+-.
T Consensus 179 ~---~~~~-----~~~~--~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 179 F---QGFE-----CIRT--MHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247 (410)
T ss_dssp T---TSSC-----EEEC--CCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred C---CCCc-----eeEE--EcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC
Confidence 1 1111 1100 012232 356877 788888899999999999999999988876 6799999998777
Q ss_pred EEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhh-------------------hcceeeEeecCCeeeE
Q 016020 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQ-------------------FNEKLLVKQENENLQI 297 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~-------------------~~ekLLIKQed~~L~I 297 (396)
+++.... +-.++||++.+|+....+. .|... +.|.+. .+.+|+....|+.++|
T Consensus 248 ~l~s~s~--D~~v~vwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 248 LIASCSN--DQTVRVWVVATKECKAELR---EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp EEEEEET--TSCEEEEETTTCCEEEEEC---CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred EEEEEcC--CCeEEEEECCCCceeeEec---CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 6676665 5678999999999888765 33333 444442 2668999999999999
Q ss_pred EEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccccccCCC---CCCCcEEEccCCc
Q 016020 298 LDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHPD---CNTNNIYITSDQD 371 (396)
Q Consensus 298 ~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~~---c~~n~~~it~~qd 371 (396)
||+.+++++.+..+|..++.+..|.+++++++|-++ |+|.+||++. +.+..+..|.-.+.. .+++.+++|...|
T Consensus 323 wd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETT
T ss_pred EECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 999999999999999999999999999999999887 8999999977 677788877543221 4556666665554
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.69 E-value=7.8e-15 Score=134.85 Aligned_cols=252 Identities=15% Similarity=0.141 Sum_probs=184.9
Q ss_pred chhhhhhccccceeeeccccceEEEe-cCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 99 DIVFALAHSGVCAAFSRETNRRICFL-NVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~~ic~l-N~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
++++.-..-|....|+..+++..+.. =..+..-|.++-++.....+++.| .+ ..++ .- ++..|+.-
T Consensus 49 ~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s----~D-~~i~--lW---d~~~~~~~--- 115 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS----LD-AHIR--LW---DLENGKQI--- 115 (321)
T ss_dssp CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE----TT-SEEE--EE---ETTTTEEE---
T ss_pred CEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe----CC-CcEE--EE---ECCCCCEE---
Confidence 35666677788999998777665532 235566788888887666554433 22 1222 22 22222210
Q ss_pred cceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEE
Q 016020 178 ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKIL 255 (396)
Q Consensus 178 ~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl 255 (396)
.-+.... ...--+.|.+ +|+.++....|+.+++||+++.+.++++.. ..|..+.+||+-.+|+.... ...++||
T Consensus 116 ~~~~~~~-~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~--dg~i~iw 191 (321)
T 3ow8_A 116 KSIDAGP-VDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI--DGIINIF 191 (321)
T ss_dssp EEEECCT-TCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET--TSCEEEE
T ss_pred EEEeCCC-ccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC--CCeEEEE
Confidence 0011100 1122477887 899999999999999999999999998876 67999999987776676665 4568999
Q ss_pred EeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEE
Q 016020 256 SIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR 332 (396)
Q Consensus 256 ~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs 332 (396)
|+++|+.+..+. .+... +.|.+ .+.+|+....|+.|+|||+.++++..+..+|...+.+.-|.++++++++-+
T Consensus 192 d~~~~~~~~~~~---~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 192 DIATGKLLHTLE---GHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp ETTTTEEEEEEC---CCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCcEEEEEc---ccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 999999998877 45444 78888 889999999999999999999999999999999999999999999999988
Q ss_pred c-CeEEEEeccc-ceeeeeccccccCC---CCCCCcEEEccCCc
Q 016020 333 N-RTVAVWNFRG-ELVTSFEDHLLWHP---DCNTNNIYITSDQD 371 (396)
Q Consensus 333 ~-gti~iWd~~g-eL~t~fedh~l~~~---~c~~n~~~it~~qd 371 (396)
. |+|++||++. +.+..|.+|.-... ..++++.++|...|
T Consensus 268 ~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 268 SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 7 8999999986 78888888753321 24556666665544
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.68 E-value=3.4e-14 Score=130.25 Aligned_cols=261 Identities=12% Similarity=0.206 Sum_probs=185.5
Q ss_pred cceEEEeeccc--hhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 016020 89 TKVIEIVAARD--IVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (396)
Q Consensus 89 S~V~EIv~a~d--ii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 166 (396)
.+|..+-...| +++.-...|....||..+++.+..+.. +...|.++-++.....|++.| .|. .+ +.-.
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~---~d~--~v--~iw~-- 125 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGG---LDN--IC--SIYN-- 125 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSSEEEEEE---TTC--EE--EEEE--
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCCEEEEEe---CCC--eE--EEEE--
Confidence 45555555533 677777889999999999998887765 445577788887766655533 222 22 2222
Q ss_pred hhhhCCCCCCCcceeecccCCCCeE---EeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEE
Q 016020 167 YIRRGKPDSGFALFESESLKWPGFV---EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLL 241 (396)
Q Consensus 167 ~i~~gk~~~~~~LF~~~~l~~PgfV---EFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll 241 (396)
+..++ +..-.....-.|.+.| .|.+ +++ ++..+.|+.++|||+++.+.+..+.+ ..|..+.++|+-.++
T Consensus 126 -~~~~~---~~~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 126 -LKTRE---GNVRVSRELAGHTGYLSCCRFLD-DNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp -TTTCS---BSCEEEEEEECCSSCEEEEEEEE-TTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred -CccCC---CcceeEEEecCCCccEEEEEECC-CCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence 11111 1111112223455543 4555 455 55567899999999999999999976 789999999987777
Q ss_pred EEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEeccc--ccCCC
Q 016020 242 IFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EFMTP 316 (396)
Q Consensus 242 ~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t--~~~~P 316 (396)
+.... +..++|||+.+|+.+..+. .|... +.|.+ .+.+|++...|+.+++||+.+++....... +....
T Consensus 200 ~sg~~--d~~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 200 VSGAC--DASAKLWDVREGMCRQTFT---GHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp EEEET--TSCEEEEETTTCSEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred EEEeC--CCcEEEEECCCCeeEEEEc---CCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 77665 5678999999999988876 55554 78887 789999999999999999999887664432 22356
Q ss_pred ceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccccccCCC---CCCCcEEEccCCc
Q 016020 317 SAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHPD---CNTNNIYITSDQD 371 (396)
Q Consensus 317 sAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~~---c~~n~~~it~~qd 371 (396)
.+.-|.++++++++-++ |+|.+||... +.+..+..|.-+... .+++..++|+..|
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCC
Confidence 78889999999998887 8999999866 788888888655322 5566666665554
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.67 E-value=4.6e-14 Score=127.40 Aligned_cols=234 Identities=13% Similarity=0.174 Sum_probs=173.6
Q ss_pred cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 98 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
...++.-...|....||..+++.+..+... ...|+++-+....+.|++.| ++ ..++. - ++..| .
T Consensus 25 ~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~s----~d-~~i~v--w---d~~~~-----~ 88 (304)
T 2ynn_A 25 EPWVLTTLYSGRVELWNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGS----DD-FRIRV--F---NYNTG-----E 88 (304)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEE----TT-SEEEE--E---ETTTC-----C
T ss_pred CCEEEEEcCCCcEEEEECCCCceeEEeecc-CCcEEEEEEeCCCCEEEEEC----CC-CEEEE--E---ECCCC-----c
Confidence 345666677899999999999988888754 44677888887777776643 23 22222 2 22222 2
Q ss_pred cceeecccCCCCe---EEeeCCCCcEEEeecCCCeEEEEeccCc-eEEEEecc--CceEEEEEcC-CeEEEEEecCCCee
Q 016020 178 ALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNY-TMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHV 250 (396)
Q Consensus 178 ~LF~~~~l~~Pgf---VEFDd~NgkIlt~~a~d~~YrVwdlknY-s~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~i 250 (396)
++.+ --.|++. +.|.+ +|+.++..+.|+++|+||+++. .....+.+ ..|..+.++| +-.+++.... +.
T Consensus 89 ~~~~--~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~--D~ 163 (304)
T 2ynn_A 89 KVVD--FEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL--DR 163 (304)
T ss_dssp EEEE--EECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET--TS
T ss_pred EEEE--EeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC--CC
Confidence 2221 1135554 46887 7888889999999999999987 44455554 7799999998 4444455554 46
Q ss_pred eeEEEEeecCcEEEEEEeecccCCc---cchhhh-hcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCe
Q 016020 251 PLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 251 plkIl~IetG~~l~s~~~~L~~sk~---i~FiE~-~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q 326 (396)
.++|||+.+++....+. .++... ++|.+. .+.+|+....|+.|+|||+.+++++.+..+|.....+..|.++++
T Consensus 164 ~v~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp EEEEEETTCSSCSEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred eEEEEECCCCCccceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 89999999988776654 233333 455442 567899999999999999999999999999999999999999999
Q ss_pred EEEEEEc-CeEEEEeccc-ceeeeeccccc
Q 016020 327 LFLTFRN-RTVAVWNFRG-ELVTSFEDHLL 354 (396)
Q Consensus 327 LFLTfs~-gti~iWd~~g-eL~t~fedh~l 354 (396)
+++|-+. |+|++||.+. ++...+..|.-
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~ 271 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGLE 271 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCSSS
T ss_pred EEEEEcCCCeEEEEECCCCceeeeccCCCc
Confidence 9999987 9999999987 78888887753
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.63 E-value=2.2e-14 Score=127.72 Aligned_cols=178 Identities=17% Similarity=0.237 Sum_probs=144.2
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~ 267 (396)
-+.|++ +|+.++..+.|+.++|||+.+.+.+..+.+ ..|..++++|+--+++.... ...++||++++|+.+..+.
T Consensus 28 ~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~ 104 (312)
T 4ery_A 28 SVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD--DKTLKIWDVSSGKCLKTLK 104 (312)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEE
T ss_pred EEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC--CCEEEEEECCCCcEEEEEc
Confidence 367888 889999999999999999999999888876 78999999988776676665 5678999999999998877
Q ss_pred eecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 268 HLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 268 ~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
.+... +.|.+ .+.+|+....|+.+++||+.+++.......+..+..+..|.++++++++-+. |+|.+||++.
T Consensus 105 ---~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 105 ---GHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp ---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ---CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 55555 56777 7889999999999999999999999988899999999999999999998886 9999999986
Q ss_pred -ceeeee-cccccc---CCCCCCCcEEEccCCcEEE
Q 016020 344 -ELVTSF-EDHLLW---HPDCNTNNIYITSDQDLII 374 (396)
Q Consensus 344 -eL~t~f-edh~l~---~~~c~~n~~~it~~qd~ii 374 (396)
+.+..+ +.|... ....++++++++...|=-|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
T 4ery_A 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216 (312)
T ss_dssp CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 554444 333221 1125667777776655333
No 7
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.63 E-value=3.9e-14 Score=128.36 Aligned_cols=246 Identities=9% Similarity=0.058 Sum_probs=174.4
Q ss_pred cceEEEeeccchhhhhhccccceeeeccccc------eEEEecCCCCceEEEEeeecC----C---CeEEEEEeEecCCC
Q 016020 89 TKVIEIVAARDIVFALAHSGVCAAFSRETNR------RICFLNVSPDEVIRSLFYNKN----N---DSLITVSVYASDNF 155 (396)
Q Consensus 89 S~V~EIv~a~dii~~L~~sG~c~af~~~t~~------~ic~lN~s~~evIrsifyN~~----n---~slI~vSv~~sd~~ 155 (396)
.+|.-+-...+++++-...|....||..+++ .+..+. .+..-|.++-++.. . ..|++.| .|.
T Consensus 17 ~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~---~dg- 91 (397)
T 1sq9_A 17 ADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTS---FSG- 91 (397)
T ss_dssp SCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEE---TTS-
T ss_pred cCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEc---CCC-
Confidence 3455555555677777888999999999988 555555 45556888888876 4 4444432 232
Q ss_pred ceeeeEeeehhhhhhCCCCCCCcceeeccc------CCCCeEEee----CCCCcE-EEeecCCCeEEEEeccC------c
Q 016020 156 SSLKCRSTKIEYIRRGKPDSGFALFESESL------KWPGFVEFD----DVNGKV-LTYSAQDSIYKVFDLKN------Y 218 (396)
Q Consensus 156 s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l------~~PgfVEFD----d~NgkI-lt~~a~d~~YrVwdlkn------Y 218 (396)
.++.-.+. .++.....++..-... ...--+.|. + +|+. ++....|+.+++||+.+ .
T Consensus 92 -~i~iw~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 -DLLFYRIT-----REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp -CEEEEEEE-----ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred -CEEEEEcc-----CCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 33333322 2221111011111111 233457888 5 6777 88889999999999999 6
Q ss_pred eEEE-----Ee---------ccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeeccc---CCc---cch
Q 016020 219 TMLY-----SI---------SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR---NKK---VDF 278 (396)
Q Consensus 219 s~ly-----sI---------s~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~---sk~---i~F 278 (396)
+.+. .+ ....|..+.++|+- +++.... ...++||++.+++.+..+.....| ... +.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN--NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT--TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC--CCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 6555 55 35789999999877 6666555 467999999999999888721113 344 778
Q ss_pred hhhhcceeeEeecC---CeeeEEEcccceEEEeccc-------------ccCCCceEEEeecCeEEEEEEc-CeEEEEec
Q 016020 279 IEQFNEKLLVKQEN---ENLQILDVRNAELMEVSRT-------------EFMTPSAFIFLYENQLFLTFRN-RTVAVWNF 341 (396)
Q Consensus 279 iE~~~ekLLIKQed---~~L~I~Dv~~~ki~~v~~t-------------~~~~PsAFiFly~~qLFLTfs~-gti~iWd~ 341 (396)
.+ .+.+|++...| +.|++||+.+++.+..... +...+.+..|.++++++++-+. |+|.+||+
T Consensus 242 ~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 242 SP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp CS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 77 68999999999 9999999999999988887 8899999999999999999886 99999999
Q ss_pred cc-ceeeeec
Q 016020 342 RG-ELVTSFE 350 (396)
Q Consensus 342 ~g-eL~t~fe 350 (396)
+. +++..+.
T Consensus 321 ~~~~~~~~~~ 330 (397)
T 1sq9_A 321 KTKERITTLN 330 (397)
T ss_dssp TTTEEEEEEE
T ss_pred CCCceeEEEe
Confidence 76 7888887
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.63 E-value=1.9e-14 Score=136.30 Aligned_cols=182 Identities=14% Similarity=0.258 Sum_probs=149.3
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
+.|++ +|+.++..+.|+.++|||+.+++++..+.+ ..|..+.++|+--.++.... +..+++||+++|+.+..+.
T Consensus 156 v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~--D~~i~~wd~~~~~~~~~~~- 231 (410)
T 1vyh_C 156 ISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR--DKTIKMWEVQTGYCVKTFT- 231 (410)
T ss_dssp EEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET--TSEEEEEETTTCCEEEEEE-
T ss_pred EEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEe-
Confidence 67887 789999999999999999999999999876 78999999987666666655 5779999999999998877
Q ss_pred ecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeec--------------------C
Q 016020 269 LLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE--------------------N 325 (396)
Q Consensus 269 ~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~--------------------~ 325 (396)
.|+.. +.|.+ .+..|+....|+.+++||+.++++......|...+.+.-|.++ +
T Consensus 232 --~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 232 --GHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp --CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C
T ss_pred --CCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCC
Confidence 55554 56665 7889999999999999999999999999999999999999886 5
Q ss_pred eEEEEEEc-CeEEEEeccc-ceeeeeccccccCCC---CCCCcEEEccCCcEEEEeccC
Q 016020 326 QLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHPD---CNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 326 qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~~---c~~n~~~it~~qd~ii~~~~~ 379 (396)
.+++|-+. |+|.+||++. +.+..+..|.-|... .+++++++|...|=-|.....
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 56777776 8999999885 778888888765432 567777777777754444443
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.62 E-value=2e-13 Score=126.77 Aligned_cols=254 Identities=13% Similarity=0.214 Sum_probs=177.4
Q ss_pred chhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc
Q 016020 99 DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA 178 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~ 178 (396)
..|+.-..-|....||..+++....+... ...|.++-++.....+++.+ .|+ +|+.-+... ++. .+..
T Consensus 77 ~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~-~~~v~~~~~sp~g~~lasg~---~d~----~i~v~~~~~---~~~-~~~~ 144 (354)
T 2pbi_B 77 RRIVSSSQDGKVIVWDSFTTNKEHAVTMP-CTWVMACAYAPSGCAIACGG---LDN----KCSVYPLTF---DKN-ENMA 144 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCEEEECTTSSEEEEES---TTS----EEEEEECCC---CTT-CCSG
T ss_pred CEEEEEeCCCeEEEEECCCCCcceEEecC-CCCEEEEEECCCCCEEEEee---CCC----CEEEEEEec---ccc-cccc
Confidence 35666677799999999999888877654 44567788887766655532 222 233332211 110 1110
Q ss_pred ceeecccCCCCe---EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCC--eEEEEEecCCCeee
Q 016020 179 LFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPG--IMLLIFNRSSSHVP 251 (396)
Q Consensus 179 LF~~~~l~~Pgf---VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg--~~Ll~~q~~~~~ip 251 (396)
--....-.|.+. +.|.+ +++.++..+.|+++++||+++.+.+.++.+ ..|..+.++|. -.+++.... +..
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~--Dg~ 221 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC--DKK 221 (354)
T ss_dssp GGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEET--TSC
T ss_pred ccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeC--CCe
Confidence 001111134444 46777 566677778899999999999999998875 77999999863 133344444 467
Q ss_pred eEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEeccc--ccCCCceEEEeecCe
Q 016020 252 LKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT--EFMTPSAFIFLYENQ 326 (396)
Q Consensus 252 lkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t--~~~~PsAFiFly~~q 326 (396)
++|||+.+|+.+..+. .|... +.|.+ .+.+|+....|+.+++||+++++...+... ....+.+.-|.++++
T Consensus 222 v~~wd~~~~~~~~~~~---~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFE---THESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR 297 (354)
T ss_dssp EEEEETTTCCEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred EEEEECCCCcEEEEec---CCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC
Confidence 9999999999988776 55555 67777 789999999999999999999877665433 334667889999999
Q ss_pred EEEEEEc-CeEEEEecc-cceeeeeccccccCCC---CCCCcEEEccCCc
Q 016020 327 LFLTFRN-RTVAVWNFR-GELVTSFEDHLLWHPD---CNTNNIYITSDQD 371 (396)
Q Consensus 327 LFLTfs~-gti~iWd~~-geL~t~fedh~l~~~~---c~~n~~~it~~qd 371 (396)
++++-+. ++|.+||+. |+.+..+..|.-+... .|++++++|...|
T Consensus 298 ~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 298 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 9888876 899999984 5788888888655322 6677777776665
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.61 E-value=3.1e-14 Score=128.57 Aligned_cols=180 Identities=13% Similarity=0.122 Sum_probs=140.1
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~ 267 (396)
-+.|.+ +|+.++..+.|+.++|||+.+...+..+.. ..|..++++|+-.+++.... +..++|||+++|+.+..+.
T Consensus 18 ~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 18 GIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp EEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEE
T ss_pred EEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC--CCEEEEEECCCCcEEEEEe
Confidence 467888 788899899999999999999999988875 67999999988777777666 5778999999999999887
Q ss_pred eecccCCc---cchhhhhcceeeEeecCCeeeEEEcccc-eEEEecccccCCCceEEEee-cCeEEEEEEc-CeEEEEec
Q 016020 268 HLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNA-ELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-RTVAVWNF 341 (396)
Q Consensus 268 ~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~-ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~-gti~iWd~ 341 (396)
.|... +.|.+ .+.+|+....|+.+++||+.++ ++..+..+|.....+.-|.+ ++++++|-+. |+|++||+
T Consensus 95 ---~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 95 ---AHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp ---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred ---CCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 56655 77877 7889999999999999999997 66678889999999999998 5678888776 99999999
Q ss_pred cc-ceeeee-cccc---ccCCCC--CCCcEEEccCCcEEEEe
Q 016020 342 RG-ELVTSF-EDHL---LWHPDC--NTNNIYITSDQDLIISY 376 (396)
Q Consensus 342 ~g-eL~t~f-edh~---l~~~~c--~~n~~~it~~qd~ii~~ 376 (396)
+. .....+ ..|. .....+ +++.+++|+..|=-|--
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~i 212 (304)
T 2ynn_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212 (304)
T ss_dssp TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEE
T ss_pred CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 65 322222 2221 111112 35566666666644433
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.61 E-value=1.3e-14 Score=136.32 Aligned_cols=177 Identities=16% Similarity=0.156 Sum_probs=136.3
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCe-EEEEEecCCCeeeeEEEEeecCcEEEEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~IetG~~l~s~~ 267 (396)
+.|.+ +|+.|+..+.|+++||||+++.+.+..+.+ ..|..+.++|.- .+++.... +..++|||+++|+.+..+.
T Consensus 133 v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~ 209 (344)
T 4gqb_B 133 VSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSE--DNRILLWDTRCPKPASQIG 209 (344)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEET--TSCEEEEETTSSSCEEECC
T ss_pred EEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecc--ccccccccccccceeeeee
Confidence 56887 899999999999999999999999999986 889999999753 45555554 4678999999999998765
Q ss_pred eecccC--CccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecC-eEEEEEEc-CeEEEEeccc
Q 016020 268 HLLHRN--KKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN-QLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 268 ~~L~~s--k~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~-qLFLTfs~-gti~iWd~~g 343 (396)
...+.. .-+.|.+..+..|+...+|+.|+|||+++++++.....|.....+..|.+++ ++++|-+. |+|.|||.+.
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 210 CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 322221 2378888677778889999999999999999999999999999999999987 56777775 9999999998
Q ss_pred -ceeeeeccccccCCC---CCCCc-EEEccCCc
Q 016020 344 -ELVTSFEDHLLWHPD---CNTNN-IYITSDQD 371 (396)
Q Consensus 344 -eL~t~fedh~l~~~~---c~~n~-~~it~~qd 371 (396)
+++ .+++|--++-. +|++. ++.|...|
T Consensus 290 ~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 290 SELF-RSQAHRDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp CEEE-EECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCC
Confidence 454 46777544322 55654 45554333
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.60 E-value=1.4e-12 Score=116.21 Aligned_cols=255 Identities=15% Similarity=0.198 Sum_probs=178.3
Q ss_pred ceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhh
Q 016020 90 KVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 167 (396)
Q Consensus 90 ~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~ 167 (396)
+|.-+-.. ...++.-...|....|+..+++....+.... .-|.++-++...+.|++.| .|. .++.- +
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~---~d~--~i~vw-----d 93 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVSAS---DDK--TLKIW-----D 93 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEE---TTS--EEEEE-----E
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC-CceEEEEEcCCCCEEEEEC---CCC--EEEEE-----E
Confidence 34444433 3456666778999999999999999887544 4577888888776666543 222 22222 2
Q ss_pred hhhCCCCCCCcceeecccCCCCe---EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEE
Q 016020 168 IRRGKPDSGFALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLI 242 (396)
Q Consensus 168 i~~gk~~~~~~LF~~~~l~~Pgf---VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~ 242 (396)
++.|+ ++.. .-.|.+. +.|.+ +|..++..+.|+.+++||+++.+.+..+.. ..|..+.++|+-.+++
T Consensus 94 ~~~~~-----~~~~--~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 94 VSSGK-----CLKT--LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp TTTCC-----EEEE--EECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CCCCc-----EEEE--EcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 22222 1111 0123333 46777 788888899999999999999999999876 6799999998766666
Q ss_pred EecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCce-
Q 016020 243 FNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA- 318 (396)
Q Consensus 243 ~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsA- 318 (396)
.... ...+++||+.+|+.+..+. .++... +.|.+ .+++|+....|+.+++||+.+++.......+...+..
T Consensus 166 ~~~~--d~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 166 SSSY--DGLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 240 (312)
T ss_dssp EEET--TSCEEEEETTTCCEEEEEC--CSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCC
T ss_pred EEeC--CCcEEEEECCCCceeeEEe--ccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEE
Confidence 6555 4568999999999988764 133333 66666 7899999999999999999999998877766554332
Q ss_pred -EEE-eecCeEEEEEEc-CeEEEEeccc-ceeeeeccccccCCC---CCCCcEEEcc
Q 016020 319 -FIF-LYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHPD---CNTNNIYITS 368 (396)
Q Consensus 319 -FiF-ly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~~---c~~n~~~it~ 368 (396)
..| .++++++++-+. |+|.+||++. +++..++.|.-+... .|+++..+|+
T Consensus 241 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 297 (312)
T 4ery_A 241 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 297 (312)
T ss_dssp CEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEE
Confidence 233 356777777665 9999999987 788899988543221 4555555554
No 13
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.60 E-value=9.5e-13 Score=119.28 Aligned_cols=249 Identities=12% Similarity=0.116 Sum_probs=174.8
Q ss_pred cccceEEEeecc---------chhhhhhccccceeeeccccce-----EEEecCCC----CceEEEEeee----cCCCe-
Q 016020 87 KRTKVIEIVAAR---------DIVFALAHSGVCAAFSRETNRR-----ICFLNVSP----DEVIRSLFYN----KNNDS- 143 (396)
Q Consensus 87 ~RS~V~EIv~a~---------dii~~L~~sG~c~af~~~t~~~-----ic~lN~s~----~evIrsifyN----~~n~s- 143 (396)
...+|..+.... .+++.-...|....||..+++. +..+...+ +.-|.++-++ ...+.
T Consensus 61 h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 61 HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp CTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred CCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceE
Confidence 456677776653 4677777889999999999987 77777665 5778888888 66666
Q ss_pred EEEEEeEecCCCceeeeEeeeh-hhhhhCCCCCCCc--cee------ecccCCCCeEEeeCCCCcEEEeecCCCeEEEEe
Q 016020 144 LITVSVYASDNFSSLKCRSTKI-EYIRRGKPDSGFA--LFE------SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFD 214 (396)
Q Consensus 144 lI~vSv~~sd~~s~L~cr~~~~-~~i~~gk~~~~~~--LF~------~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwd 214 (396)
|++.+ .|. .++.-.+.- +.-..++.-.-.| -+. ...-...--+.|++ +| .++....|+.+++||
T Consensus 141 l~~~~---~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 141 LVATD---VKG--TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISE 213 (397)
T ss_dssp EEEEE---TTS--CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEE
T ss_pred EEEEe---CCC--cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEE
Confidence 55533 222 233322221 0000011101000 111 11123345678888 66 888889999999999
Q ss_pred ccCceEEEEecc--------CceEEEEEcCCeEEEEEecC-CCeeeeEEEEeecCcEEEEEEeec----------ccCCc
Q 016020 215 LKNYTMLYSISD--------KHVQEIKISPGIMLLIFNRS-SSHVPLKILSIEDGTVLKVFYHLL----------HRNKK 275 (396)
Q Consensus 215 lknYs~lysIs~--------~~VqEIkiSpg~~Ll~~q~~-~~~iplkIl~IetG~~l~s~~~~L----------~~sk~ 275 (396)
+++.+.+..+.. ..|..+.++|+-.+++.... .....++|||+.+|+.+..+.... .+...
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred CCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 999999988874 57999999976555555544 122789999999999998876210 04444
Q ss_pred ---cchhhhhcceeeEeecCCeeeEEEcccceEEEecc------cc---------------cCCCceEEEeecC------
Q 016020 276 ---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR------TE---------------FMTPSAFIFLYEN------ 325 (396)
Q Consensus 276 ---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~------t~---------------~~~PsAFiFly~~------ 325 (396)
+.|.+ .+.+|++...|+.|+|||+.+++.+.... ++ ...+.+..|.+++
T Consensus 294 v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 294 VMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp EEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred EEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 77877 78999999999999999999999999887 77 8889999999998
Q ss_pred ----eEEEEEEc-CeEEEEeccc
Q 016020 326 ----QLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 326 ----qLFLTfs~-gti~iWd~~g 343 (396)
++++|.+. |+|.+||+++
T Consensus 373 ~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 373 ADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccccceEEEecCCCcEEEEEcCC
Confidence 68888875 9999999875
No 14
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.59 E-value=3.6e-13 Score=128.87 Aligned_cols=253 Identities=14% Similarity=0.263 Sum_probs=178.8
Q ss_pred cceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 016020 89 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (396)
Q Consensus 89 S~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 166 (396)
..|..+.+. ...++.-...|....||..+. .+-.+ ..+..-|.++-++.+...|++.+ .|. .++....
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~-~~~~~~v~~~~~s~~g~~l~~~~---~dg--~v~~~~~--- 373 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTL-TGHSSSVWGVAFSPDGQTIASAS---DDK--TVKLWNR--- 373 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEE-CCCSSCEEEEEECTTSSEEEEEE---TTS--EEEEEET---
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEE-eCCCCCEEEEEECCCCCEEEEEe---CCC--EEEEEcC---
Confidence 445554443 235555666777888886543 33333 34455677888887777665533 222 2322211
Q ss_pred hhhhCCCCCCCcceeecccCCC---CeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEE
Q 016020 167 YIRRGKPDSGFALFESESLKWP---GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLL 241 (396)
Q Consensus 167 ~i~~gk~~~~~~LF~~~~l~~P---gfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll 241 (396)
.|+ +..+. ..|+ --+.|++ +|+.++..+.|+.++|||. +.+++..+.+ ..|..+.+||+-.+|
T Consensus 374 ---~~~------~~~~~-~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 374 ---NGQ------LLQTL-TGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp ---TCC------EEEEE-ECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ---CCC------EEEEe-cCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 111 11111 1122 2467887 7888988899999999995 6777777776 889999999876666
Q ss_pred EEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCce
Q 016020 242 IFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA 318 (396)
Q Consensus 242 ~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsA 318 (396)
+.... ...+++|++ +|+.+..+. .|... +.|.+ .+++|+...+|+.|+||| .++++++....|...+.+
T Consensus 442 ~~~~~--d~~v~~w~~-~~~~~~~~~---~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~ 513 (577)
T 2ymu_A 442 ASASD--DKTVKLWNR-NGQLLQTLT---GHSSSVRGVAFSP-DGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRG 513 (577)
T ss_dssp EEEET--TSEEEEEET-TSCEEEEEE---CCSSCEEEEEECT-TSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEE
T ss_pred EEEcC--CCEEEEEEC-CCCEEEEEc---CCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEE
Confidence 66555 456899995 788877766 55555 78887 899999999999999999 588889988999999999
Q ss_pred EEEeecCeEEEEEEc-CeEEEEecccceeeeeccccccCC---CCCCCcEEEccCCc
Q 016020 319 FIFLYENQLFLTFRN-RTVAVWNFRGELVTSFEDHLLWHP---DCNTNNIYITSDQD 371 (396)
Q Consensus 319 FiFly~~qLFLTfs~-gti~iWd~~geL~t~fedh~l~~~---~c~~n~~~it~~qd 371 (396)
.-|++++++++|.+. |+|.+||..|+++..+..|.-.+. ..||++.++|..+|
T Consensus 514 l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 514 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 999999999998887 899999999998888888754322 25666666665554
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.59 E-value=5.9e-13 Score=124.68 Aligned_cols=248 Identities=13% Similarity=0.144 Sum_probs=172.7
Q ss_pred ccccceeeeccccceEEEecCCC-----------------CceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhh
Q 016020 106 HSGVCAAFSRETNRRICFLNVSP-----------------DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYI 168 (396)
Q Consensus 106 ~sG~c~af~~~t~~~ic~lN~s~-----------------~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i 168 (396)
..+....|+..+|+.+..+.... +..|+++-++....-|++.| .|. .+ +.-++
T Consensus 83 ~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~---~d~--~i--~iwd~--- 152 (393)
T 1erj_A 83 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA---EDR--LI--RIWDI--- 152 (393)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE---TTS--CE--EEEET---
T ss_pred cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc---CCC--eE--EEEEC---
Confidence 35678899999999988875432 22489999998766665533 222 22 22222
Q ss_pred hhCCCCCCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcC-CeEEEEE
Q 016020 169 RRGKPDSGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISP-GIMLLIF 243 (396)
Q Consensus 169 ~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSp-g~~Ll~~ 243 (396)
..| ..+.. .-.|.+ -+.|.+ +|+.++..+.|+.+++||+++.+.+..+.. ..+..+.++| +-.+++.
T Consensus 153 ~~~-----~~~~~--~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 224 (393)
T 1erj_A 153 ENR-----KIVMI--LQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 224 (393)
T ss_dssp TTT-----EEEEE--ECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEE
T ss_pred CCC-----cEEEE--EccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEE
Confidence 111 11111 112333 367877 788888899999999999999998888876 7899999997 4344444
Q ss_pred ecCCCeeeeEEEEeecCcEEEEEEee----cccCCc---cchhhhhcceeeEeecCCeeeEEEcccc------------e
Q 016020 244 NRSSSHVPLKILSIEDGTVLKVFYHL----LHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNA------------E 304 (396)
Q Consensus 244 q~~~~~iplkIl~IetG~~l~s~~~~----L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~------------k 304 (396)
... ...++|||+++|+.+..+... ..|... +.|.+ .+++|+....|+.+++||+.+. .
T Consensus 225 ~s~--d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~ 301 (393)
T 1erj_A 225 GSL--DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301 (393)
T ss_dssp EET--TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC---------------C
T ss_pred EcC--CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCc
Confidence 444 456899999999988776311 234333 78887 8899999999999999999874 3
Q ss_pred EEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccccccC------CC---CCCCcEEEccCCcEE
Q 016020 305 LMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWH------PD---CNTNNIYITSDQDLI 373 (396)
Q Consensus 305 i~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~------~~---c~~n~~~it~~qd~i 373 (396)
+.....+|.....+..|.++++++++-+. |+|.+||... +.+..++.|.-.+ +. .+++++++|+..|=-
T Consensus 302 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 302 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred ceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 44555678888888999999999999887 8999999876 7777888885432 21 246778888776643
Q ss_pred E
Q 016020 374 I 374 (396)
Q Consensus 374 i 374 (396)
|
T Consensus 382 i 382 (393)
T 1erj_A 382 A 382 (393)
T ss_dssp E
T ss_pred E
Confidence 3
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.58 E-value=1.5e-13 Score=128.68 Aligned_cols=185 Identities=14% Similarity=0.213 Sum_probs=143.0
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~ 267 (396)
-+.|.+ +|+.++..+.|+.++|||+.+.+.+..+.+ ..|..+.++|+--.|+.... +..++|||+.+|+....+.
T Consensus 128 ~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 128 SVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG--DRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEEE
T ss_pred EEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC--CCcEEEEECCCCeeEEEEE
Confidence 367887 899999999999999999999999988876 77999999987666666655 5679999999999888776
Q ss_pred eecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEec-------ccccCCCceEEEeecCeEEEEEEc-CeEEEE
Q 016020 268 HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-------RTEFMTPSAFIFLYENQLFLTFRN-RTVAVW 339 (396)
Q Consensus 268 ~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~-------~t~~~~PsAFiFly~~qLFLTfs~-gti~iW 339 (396)
+. ..-..+.|.+..+.+|++...|+.++|||+.++++.... .+|...+.+..|.+++++++|-+. |+|.+|
T Consensus 205 ~~-~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 205 IE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp CS-SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cC-CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 21 111237788778999999999999999999999988755 467788999999999999999886 999999
Q ss_pred eccc-------------ceeeeeccccccCC---CCCCCcEEEccCCcEEEEecc
Q 016020 340 NFRG-------------ELVTSFEDHLLWHP---DCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 340 d~~g-------------eL~t~fedh~l~~~---~c~~n~~~it~~qd~ii~~~~ 378 (396)
|++. .....+..|.-++. ..+++.+++|...|=.|....
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 9874 23445666654322 255666777766664444333
No 17
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.58 E-value=6.3e-13 Score=116.23 Aligned_cols=228 Identities=17% Similarity=0.156 Sum_probs=162.5
Q ss_pred hhhhhhccccceeeeccccceEE---Eec-CCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCC
Q 016020 100 IVFALAHSGVCAAFSRETNRRIC---FLN-VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDS 175 (396)
Q Consensus 100 ii~~L~~sG~c~af~~~t~~~ic---~lN-~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~ 175 (396)
++++-. .|....||..+++... .+. ..+...|.++-++.....|++.+ .| ..++...+ ..++.
T Consensus 65 ~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d--~~i~~~d~-----~~~~~-- 131 (337)
T 1gxr_A 65 HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG---EA--STLSIWDL-----AAPTP-- 131 (337)
T ss_dssp EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE---SS--SEEEEEEC-----CCC----
T ss_pred EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc---CC--CcEEEEEC-----CCCCc--
Confidence 444444 7889999988776333 222 25677889999998776666643 22 23333322 11110
Q ss_pred CCcceee-cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeee
Q 016020 176 GFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPL 252 (396)
Q Consensus 176 ~~~LF~~-~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~ipl 252 (396)
.....- ..-...--+.|++ +|+.++....|+.+++||+++.+.+..+.. ..|..+.++|+-..++.... .-.+
T Consensus 132 -~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i 207 (337)
T 1gxr_A 132 -RIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL--DNTV 207 (337)
T ss_dssp -EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSEE
T ss_pred -ceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec--CCcE
Confidence 011111 1111122467887 788888889999999999999999999875 78999999977655555544 4578
Q ss_pred EEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEE
Q 016020 253 KILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR 332 (396)
Q Consensus 253 kIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs 332 (396)
++||+.+|+.+..+.+. ..-..+.|.+ .+.+|++..+++.+++||+.+++.... ..+...+.+..|.++++++++.+
T Consensus 208 ~~~d~~~~~~~~~~~~~-~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 208 RSWDLREGRQLQQHDFT-SQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKYQL-HLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp EEEETTTTEEEEEEECS-SCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCceEeeecCC-CceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeEEE-cCCccceeEEEECCCCCEEEEec
Confidence 99999999998887631 1122377777 789999999999999999999988754 56778899999999999998888
Q ss_pred c-CeEEEEeccc-ceee
Q 016020 333 N-RTVAVWNFRG-ELVT 347 (396)
Q Consensus 333 ~-gti~iWd~~g-eL~t 347 (396)
. |+|.+||++. +.+.
T Consensus 285 ~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 285 KDNLLNAWRTPYGASIF 301 (337)
T ss_dssp TTSEEEEEETTTCCEEE
T ss_pred CCCcEEEEECCCCeEEE
Confidence 6 9999999987 4443
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.57 E-value=6.4e-13 Score=124.39 Aligned_cols=255 Identities=13% Similarity=0.144 Sum_probs=175.3
Q ss_pred cccceEEEeecc-chhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecC-CCeEEEEEeEecCCCceeeeEeee
Q 016020 87 KRTKVIEIVAAR-DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKN-NDSLITVSVYASDNFSSLKCRSTK 164 (396)
Q Consensus 87 ~RS~V~EIv~a~-dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~-n~slI~vSv~~sd~~s~L~cr~~~ 164 (396)
....|..+.... ..++.-...|....||..+++.+..+.. +..-|.++=++.. +..++. +. ..|. .++.-.+.
T Consensus 161 h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~l~-s~-s~d~--~i~vwd~~ 235 (464)
T 3v7d_B 161 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIV-TG-SRDN--TLHVWKLP 235 (464)
T ss_dssp CSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCEEEE-EE-ETTS--CEEEEECC
T ss_pred CCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCCEEE-EE-cCCC--cEEEeeCC
Confidence 456677777664 4777778889999999999998888875 4556677766643 333333 21 1222 23332221
Q ss_pred hhh-hh-hCCC---------CCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEE
Q 016020 165 IEY-IR-RGKP---------DSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQE 231 (396)
Q Consensus 165 ~~~-i~-~gk~---------~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqE 231 (396)
-.. +. .+.. ..+.+.+....-.|.+.|.-=..+|..++..+.|+.++|||+.+.+.+..+.+ ..|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 315 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYS 315 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEE
Confidence 100 00 0000 00011122223334443332234688899999999999999999999999986 78999
Q ss_pred EEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEeccc
Q 016020 232 IKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 311 (396)
Q Consensus 232 IkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t 311 (396)
+.++|+-..++.... +..++|||+++|+.+..+. .|...+.-+...+.+|++...|+.|++||+.+++..... .
T Consensus 316 ~~~~~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~ 389 (464)
T 3v7d_B 316 TIYDHERKRCISASM--DTTIRIWDLENGELMYTLQ---GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY-H 389 (464)
T ss_dssp EEEETTTTEEEEEET--TSCEEEEETTTTEEEEEEC---CCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEE-E
T ss_pred EEEcCCCCEEEEEeC--CCcEEEEECCCCcEEEEEe---CCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeee-c
Confidence 999987555555555 4569999999999999887 666776655556889999999999999999997755433 3
Q ss_pred ccCCCceEEEeecCeEEEEEEcCeEEEEeccc-ceeee-eccc
Q 016020 312 EFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-ELVTS-FEDH 352 (396)
Q Consensus 312 ~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g-eL~t~-fedh 352 (396)
+........|.++++++++-++|+|.+||++. +++.. +..|
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~ 432 (464)
T 3v7d_B 390 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKD 432 (464)
T ss_dssp CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESCTTTT
T ss_pred CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehhhccC
Confidence 55567778899999999999999999999876 66653 4444
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.57 E-value=6.6e-13 Score=123.81 Aligned_cols=266 Identities=12% Similarity=0.168 Sum_probs=177.9
Q ss_pred cceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 016020 89 TKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (396)
Q Consensus 89 S~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 166 (396)
.+|.-+-.. ..+++.-...|....||..+++.+..+...... |.++-++.+...|++.| .+ . .|+.-.++
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~-v~~~~~s~~g~~las~~----~d-~--~v~iw~~~ 138 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW-VMECAFAPNGQSVACGG----LD-S--ACSIFNLS 138 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTT-CCCCEECTTSSEEEECC----SS-S--CCEEEECC
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCC-EEEEEECCCCCEEEEee----CC-C--cEEEEECC
Confidence 455555554 346777778899999999999999888765554 55666777666665532 22 1 22322221
Q ss_pred hhhhCCCCCCCcceeecccCCCCe---EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec-------cCceEEEEEcC
Q 016020 167 YIRRGKPDSGFALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-------DKHVQEIKISP 236 (396)
Q Consensus 167 ~i~~gk~~~~~~LF~~~~l~~Pgf---VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs-------~~~VqEIkiSp 236 (396)
. +....+........-.|.++ +.|.+.++..++..+.|+++++||+++.+.+..+. ...|..+.++|
T Consensus 139 ~---~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 139 S---QADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp C---CSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred C---CccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 1 11001110011111233333 35666556677788899999999999999888772 26789999975
Q ss_pred -CeEEEEEecCCCeeeeEEEEee-cCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEeccc
Q 016020 237 -GIMLLIFNRSSSHVPLKILSIE-DGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT 311 (396)
Q Consensus 237 -g~~Ll~~q~~~~~iplkIl~Ie-tG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t 311 (396)
+-.+++.... +..++|||+. +++.+..+. .|... +.|.+ .+.+|+....|+.++|||+++++.+.+...
T Consensus 216 ~~~~~l~sgs~--D~~v~~wd~~~~~~~~~~~~---~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 216 LNANMFISGSC--DTTVRLWDLRITSRAVRTYH---GHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp SSCCEEEEEET--TSCEEEEETTTTCCCCEEEC---CCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred CCCCEEEEEEC--CCeEEEEECCCCCcceEEEC---CcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 4444455554 5678999998 456666555 55555 78887 889999999999999999999998886554
Q ss_pred ccC-------CCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeee----ccccccCC---CCCCCcEEEccCCc
Q 016020 312 EFM-------TPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSF----EDHLLWHP---DCNTNNIYITSDQD 371 (396)
Q Consensus 312 ~~~-------~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~f----edh~l~~~---~c~~n~~~it~~qd 371 (396)
+.. ...+.-|.++++++++-++ |+|.+||... +.+..+ ..|.-... ..|+++.++|+..|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 432 3578899999999888876 9999999865 666665 44543322 25666666666555
No 20
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.56 E-value=2.3e-13 Score=124.68 Aligned_cols=258 Identities=12% Similarity=0.093 Sum_probs=180.9
Q ss_pred cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 98 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
...++.-...|....||..+++....+... +++...+++...+.|++.| .|. .++.-. +..|+
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~---~dg--~i~iwd-----~~~~~----- 130 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKLQMRRFILGT---TEG--DIKVLD-----SNFNL----- 130 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECSSSCEEEEEE---TTS--CEEEEC-----TTSCE-----
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEecCCCEEEEEE---CCC--CEEEEe-----CCCcc-----
Confidence 445666667788888988877665554433 6677777777666665533 222 222221 22211
Q ss_pred cceeecccCCCCe---EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeee
Q 016020 178 ALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPL 252 (396)
Q Consensus 178 ~LF~~~~l~~Pgf---VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~ipl 252 (396)
++- ..-.|++- +.|++ +|+.++..+.|+.+++||+.+.+.+..+.+ ..|..+.++|+--+|+.... +..+
T Consensus 131 ~~~--~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d~~v 205 (420)
T 3vl1_A 131 QRE--IDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASL--DGTI 205 (420)
T ss_dssp EEE--ETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEET--TSCE
T ss_pred eee--ecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcC--CCcE
Confidence 111 01134443 67887 788999999999999999999998888875 78999999987655565555 4679
Q ss_pred EEEEeecCcEEEEEEeec------------------------ccCCccchhhhhcceeeEeecCCeeeEEEcccceEEE-
Q 016020 253 KILSIEDGTVLKVFYHLL------------------------HRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME- 307 (396)
Q Consensus 253 kIl~IetG~~l~s~~~~L------------------------~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~- 307 (396)
+|||+.+|+.+..+...- ..-..+.|.+ .+.+|++...|+.|++||+.+++...
T Consensus 206 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 206 RLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeEE
Confidence 999999999998876211 1112266666 88999999999999999999987655
Q ss_pred ecccccCCCceEEEeecCe-EEEEEEc-CeEEEEeccc--ceeeeecccc---ccCCCCCCCcEEEccCCcEEEEecc
Q 016020 308 VSRTEFMTPSAFIFLYENQ-LFLTFRN-RTVAVWNFRG--ELVTSFEDHL---LWHPDCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 308 v~~t~~~~PsAFiFly~~q-LFLTfs~-gti~iWd~~g--eL~t~fedh~---l~~~~c~~n~~~it~~qd~ii~~~~ 378 (396)
+...+...+.+..|.++++ ++++-+. |+|.+||++. .++..+..|- .+....+++.+++|+..|=-|....
T Consensus 285 ~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 285 LPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp ECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEE
T ss_pred cccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEe
Confidence 5556788899999999998 7777776 9999999986 3566676532 2222255777888887776555444
No 21
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.56 E-value=1.1e-13 Score=122.53 Aligned_cols=271 Identities=12% Similarity=0.105 Sum_probs=183.7
Q ss_pred ccceEEEeec------cchhhhhhccccceeeeccccceEEEecC----CCCceEEEEeeecCCC---eEEEEEeEecCC
Q 016020 88 RTKVIEIVAA------RDIVFALAHSGVCAAFSRETNRRICFLNV----SPDEVIRSLFYNKNND---SLITVSVYASDN 154 (396)
Q Consensus 88 RS~V~EIv~a------~dii~~L~~sG~c~af~~~t~~~ic~lN~----s~~evIrsifyN~~n~---slI~vSv~~sd~ 154 (396)
..+|.-|-+. +..+++-+..|....||..+++.+..+.. ..++-|.++-++...+ .++.+ ...|.
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~--~~~dg 95 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV--AGSRG 95 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE--EETTC
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE--ecCCC
Confidence 3455555554 45577777888899999998888776653 3557788888887643 34442 22232
Q ss_pred CceeeeEeeehhhhhhCCCCCCCcceeec-ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEe-----ccCc
Q 016020 155 FSSLKCRSTKIEYIRRGKPDSGFALFESE-SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-----SDKH 228 (396)
Q Consensus 155 ~s~L~cr~~~~~~i~~gk~~~~~~LF~~~-~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysI-----s~~~ 228 (396)
.++.- ++..| .++..-. .-...--+.|.+.+|..++..+.|+.++|||+++.+.+..+ ....
T Consensus 96 --~i~v~-----d~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 96 --IIRII-----NPITM-----QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp --EEEEE-----CTTTC-----CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred --EEEEE-----Echhc-----eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 22222 22222 2222211 11122346788878999999999999999999999999998 3388
Q ss_pred eEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEE-------------------------eecccCCccchhhhhc
Q 016020 229 VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-------------------------HLLHRNKKVDFIEQFN 283 (396)
Q Consensus 229 VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~-------------------------~~L~~sk~i~FiE~~~ 283 (396)
|..+.++|+-..++.... ...+++|++.+|+.+..+. ....+...|.-+.-.+
T Consensus 164 v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 241 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGM--DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLG 241 (366)
T ss_dssp EEEEEECTTSSEEEEEET--TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEET
T ss_pred eeEEEECCCCCEEEEecC--CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcC
Confidence 999999987666666655 4678999999987654322 1111444433232238
Q ss_pred ceeeEeecCCeeeEEEcccceE--------------EEecccccCCCceEEEeec--CeEEEEEEc-CeEEEEeccc-c-
Q 016020 284 EKLLVKQENENLQILDVRNAEL--------------MEVSRTEFMTPSAFIFLYE--NQLFLTFRN-RTVAVWNFRG-E- 344 (396)
Q Consensus 284 ekLLIKQed~~L~I~Dv~~~ki--------------~~v~~t~~~~PsAFiFly~--~qLFLTfs~-gti~iWd~~g-e- 344 (396)
++|+....|+.|++||+.+++. +.....+...+.+.-|.++ ++++++-+. |+|.+||++. +
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 8999999999999999998743 6677778888889999999 888888776 9999999987 3
Q ss_pred ---eeeeecccc--cc---CCCCCCCcEEEccCCcEEE
Q 016020 345 ---LVTSFEDHL--LW---HPDCNTNNIYITSDQDLII 374 (396)
Q Consensus 345 ---L~t~fedh~--l~---~~~c~~n~~~it~~qd~ii 374 (396)
+...+..|. -. ....+++++.+|+..|=.|
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 359 (366)
T 3k26_A 322 HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASI 359 (366)
T ss_dssp GGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEE
Confidence 444777762 11 1125567777777666333
No 22
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.56 E-value=6.7e-13 Score=114.74 Aligned_cols=146 Identities=15% Similarity=0.131 Sum_probs=113.7
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCc----eEEEEecc--CceEEEEEcC---CeEEEEEecCCCeeeeEEEEeecCc
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSISD--KHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknY----s~lysIs~--~~VqEIkiSp---g~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
+.|++ +|+.++..+.|+.++|||+.+. +.+..+.+ ..|..++++| |.+|+.... +..++||++++|+
T Consensus 17 ~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~---dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 17 VVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY---DKTVKLWEEDPDQ 92 (351)
T ss_dssp EEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---TSCEEEEEECTTS
T ss_pred EEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---CCeEEEEecCCCc
Confidence 67887 8999999999999999999976 45555554 7899999998 666554443 4679999999984
Q ss_pred ---------EEEEEEeecccCCc---cchhhhh-cceeeEeecCCeeeEEEcccceE-----------------------
Q 016020 262 ---------VLKVFYHLLHRNKK---VDFIEQF-NEKLLVKQENENLQILDVRNAEL----------------------- 305 (396)
Q Consensus 262 ---------~l~s~~~~L~~sk~---i~FiE~~-~ekLLIKQed~~L~I~Dv~~~ki----------------------- 305 (396)
.+..+. .+... +.|.+.. +.+|++...|+.|++||+.+++.
T Consensus 93 ~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (351)
T 3f3f_A 93 EECSGRRWNKLCTLN---DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS 169 (351)
T ss_dssp CTTSSCSEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC
T ss_pred ccccccCcceeeeec---ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccc
Confidence 344443 45555 7787733 88899999999999999976542
Q ss_pred -------------------------------------EEecccccCCCceEEEeecC----eEEEEEEc-CeEEEEeccc
Q 016020 306 -------------------------------------MEVSRTEFMTPSAFIFLYEN----QLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 306 -------------------------------------~~v~~t~~~~PsAFiFly~~----qLFLTfs~-gti~iWd~~g 343 (396)
+....+|.....+..|.+++ ++++|-+. |+|.+||++.
T Consensus 170 ~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 170 DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred eeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 34455677788889999998 78888876 9999999986
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.56 E-value=2.7e-13 Score=124.84 Aligned_cols=182 Identities=12% Similarity=0.161 Sum_probs=142.7
Q ss_pred CCCC----eEEeeCCCCcEEEeecCCCeEEEEeccCceEEE--Eec---cCceEEEEEcCCeEEEEEecCCCeeeeEEEE
Q 016020 186 KWPG----FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SIS---DKHVQEIKISPGIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 186 ~~Pg----fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~ly--sIs---~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~ 256 (396)
.||+ .+.|.+ +|+.|+..+.|+.+||||+.+.+.+. .+. ...|..+++||+-.+|+.... +..++||+
T Consensus 13 ~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~--D~~v~iw~ 89 (345)
T 3fm0_A 13 AHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF--DATTCIWK 89 (345)
T ss_dssp CSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET--TSCEEEEE
T ss_pred CCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC--CCcEEEEE
Confidence 4565 688998 89999999999999999999987443 232 267999999987666666665 56789999
Q ss_pred eecCcE--EEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccc---eEEEecccccCCCceEEEeecCeEE
Q 016020 257 IEDGTV--LKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNA---ELMEVSRTEFMTPSAFIFLYENQLF 328 (396)
Q Consensus 257 IetG~~--l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~---ki~~v~~t~~~~PsAFiFly~~qLF 328 (396)
+.+++. +..+. .|... +.|.+ .+.+|+....|+.++|||+.++ ++..+...|.....+..|.++++++
T Consensus 90 ~~~~~~~~~~~~~---~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 90 KNQDDFECVTTLE---GHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp ECCC-EEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred ccCCCeEEEEEcc---CCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 998853 33343 56555 78888 8999999999999999999876 4566788899999999999999999
Q ss_pred EEEEc-CeEEEEeccc-c--eeeeeccccccCC---CCCCCcEEEccCCcEEE
Q 016020 329 LTFRN-RTVAVWNFRG-E--LVTSFEDHLLWHP---DCNTNNIYITSDQDLII 374 (396)
Q Consensus 329 LTfs~-gti~iWd~~g-e--L~t~fedh~l~~~---~c~~n~~~it~~qd~ii 374 (396)
++-+. ++|.+||.+. + ....+++|..+.. ..|++++++|...|=.|
T Consensus 166 ~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v 218 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV 218 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence 99887 8999999987 3 4468888865432 26788888887776333
No 24
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.4e-12 Score=113.21 Aligned_cols=252 Identities=10% Similarity=0.127 Sum_probs=169.1
Q ss_pred cceEEEeec-cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEe------cCC------C
Q 016020 89 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYA------SDN------F 155 (396)
Q Consensus 89 S~V~EIv~a-~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~------sd~------~ 155 (396)
.+|.-+... ...++.-...|....||..+++....+... ...|.++-++.+...|++.+.-. -.+ .
T Consensus 19 ~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 19 QDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL 97 (313)
T ss_dssp SCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-
T ss_pred CCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecC-CccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc
Confidence 344444332 446777788899999999999888887765 55678888888777666643210 000 1
Q ss_pred ceeeeEeeehhhhh-hCCC-----CCCC-cceee-----cccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceE
Q 016020 156 SSLKCRSTKIEYIR-RGKP-----DSGF-ALFES-----ESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM 220 (396)
Q Consensus 156 s~L~cr~~~~~~i~-~gk~-----~~~~-~LF~~-----~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~ 220 (396)
..++.+..++..+. .|+. ..|. .++.. ..-.+.+ -+.|.+.++..++....|+.+++||......
T Consensus 98 ~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 177 (313)
T 3odt_A 98 YTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIK 177 (313)
T ss_dssp CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEE
T ss_pred cchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEE
Confidence 11111111111110 0000 0000 11110 0011233 3466666788888899999999999665555
Q ss_pred EEEe-ccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeee
Q 016020 221 LYSI-SDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQ 296 (396)
Q Consensus 221 lysI-s~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~ 296 (396)
.+.. ....|..+.++|+-.++ .... ...++|||+.+|+.+..+. .+... +.|.+ .+ +|++...|+.|+
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~~~-~~~~--dg~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~-~~-~l~~~~~dg~v~ 249 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGHFI-SCSN--DGLIKLVDMHTGDVLRTYE---GHESFVYCIKLLP-NG-DIVSCGEDRTVR 249 (313)
T ss_dssp EECSSCSSCEEEEEEEETTEEE-EEET--TSEEEEEETTTCCEEEEEE---CCSSCEEEEEECT-TS-CEEEEETTSEEE
T ss_pred EEeccCcccEEEEEEcCCCeEE-EccC--CCeEEEEECCchhhhhhhh---cCCceEEEEEEec-CC-CEEEEecCCEEE
Confidence 5555 44889999999887744 4433 4679999999999999887 45454 77777 44 799999999999
Q ss_pred EEEcccceEEEecccccCCCceEEEeecCeEEEEEEcCeEEEEeccc-ceeeee
Q 016020 297 ILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-ELVTSF 349 (396)
Q Consensus 297 I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g-eL~t~f 349 (396)
+||+.++++......+...+.+..|.++++++..-.+|+|.+||++. +++...
T Consensus 250 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 250 IWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp EECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC--
T ss_pred EEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehh
Confidence 99999999999988998899999999999977766669999999998 454433
No 25
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.9e-12 Score=114.32 Aligned_cols=252 Identities=10% Similarity=0.131 Sum_probs=182.9
Q ss_pred cccceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeee
Q 016020 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK 164 (396)
Q Consensus 87 ~RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~ 164 (396)
....|..+... ...++.....|....||..+++.+..+. ...-|.++-++..+..+++.+.-....-..++...+
T Consensus 73 h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~- 149 (369)
T 3zwl_B 73 HTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEI- 149 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEE-
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEe-
Confidence 34567666665 4577777888999999999999999887 566788898888777666643210000022322222
Q ss_pred hhhhhhCCCCC------CCc---ceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccC-ceEEEEecc--CceEEE
Q 016020 165 IEYIRRGKPDS------GFA---LFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-YTMLYSISD--KHVQEI 232 (396)
Q Consensus 165 ~~~i~~gk~~~------~~~---LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlkn-Ys~lysIs~--~~VqEI 232 (396)
..++... ..+ +..........-+.|++ +|+.++....|+.+++||+++ .+.+..+.. ..|..+
T Consensus 150 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 150 ----ERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp ----EECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred ----cCCccceeecccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence 1211100 011 11111111445677888 888999999999999999999 888888875 789999
Q ss_pred EEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCC--------------eeeEE
Q 016020 233 KISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENE--------------NLQIL 298 (396)
Q Consensus 233 kiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~--------------~L~I~ 298 (396)
.++|+-.+|+.... ...+++||+.+|+.+..+.+. ..-..+.|.+ .+.+|++...+. .+++|
T Consensus 225 ~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (369)
T 3zwl_B 225 QFSPDLTYFITSSR--DTNSFLVDVSTLQVLKKYETD-CPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFY 300 (369)
T ss_dssp EECTTSSEEEEEET--TSEEEEEETTTCCEEEEEECS-SCEEEEEECS-SSSEEEEEECCC-------------CEEEEE
T ss_pred EECCCCCEEEEecC--CceEEEEECCCCceeeeecCC-CCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEE
Confidence 99987766666655 456899999999999988721 2222377777 888999988777 89999
Q ss_pred EcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEecccc-eeeeec
Q 016020 299 DVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRGE-LVTSFE 350 (396)
Q Consensus 299 Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~ge-L~t~fe 350 (396)
|+.+++.+....++...+.+..|.+++++++|.+. |+|.+||++.. +.-.++
T Consensus 301 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 354 (369)
T 3zwl_B 301 HKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYD 354 (369)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCH
T ss_pred ecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHH
Confidence 99999999999999999999999999999999986 99999999883 433443
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.55 E-value=7e-13 Score=124.46 Aligned_cols=234 Identities=12% Similarity=0.108 Sum_probs=170.2
Q ss_pred cccceEEEeec-cchhhhhhccccceeeeccccceEEEec---CCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEe
Q 016020 87 KRTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLN---VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRS 162 (396)
Q Consensus 87 ~RS~V~EIv~a-~dii~~L~~sG~c~af~~~t~~~ic~lN---~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~ 162 (396)
..+.|..+.+. +..+++-+..|....||..+|+.+..+. ..+...|.+|-++.....|++.| .|. .++ .
T Consensus 81 ~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs---~d~--~i~--i 153 (344)
T 4gqb_B 81 TEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS---KDI--CIK--V 153 (344)
T ss_dssp ESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE---TTS--CEE--E
T ss_pred cCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe---CCC--eEE--E
Confidence 45667777665 4566677788999999999998765433 36788899999998777766643 222 222 2
Q ss_pred eehhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc----CceEEEEEc
Q 016020 163 TKIEYIRRGKPDSGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD----KHVQEIKIS 235 (396)
Q Consensus 163 ~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~----~~VqEIkiS 235 (396)
- ++..|+ ++..- -.|.+ -+.|.+.+..+++..+.|+.+||||+++.+.+..+.. ..+..+.++
T Consensus 154 w---d~~~~~-----~~~~~--~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 154 W---DLAQQV-----VLSSY--RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp E---ETTTTE-----EEEEE--CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC
T ss_pred E---ECCCCc-----EEEEE--cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeec
Confidence 2 222222 22211 12333 3578875667888899999999999999998888753 458899999
Q ss_pred C-CeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhc-ceeeEeecCCeeeEEEcccceEEEecc
Q 016020 236 P-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFN-EKLLVKQENENLQILDVRNAELMEVSR 310 (396)
Q Consensus 236 p-g~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~-ekLLIKQed~~L~I~Dv~~~ki~~v~~ 310 (396)
| +-.+++.... +..++|||+.+|+.+..+. .|... +.|.+ .+ .+|+...+|+.|+|||+.++++.+. .
T Consensus 224 p~~~~~l~sg~~--dg~v~~wd~~~~~~~~~~~---~h~~~v~~v~fsp-~g~~~lasgs~D~~i~vwd~~~~~~~~~-~ 296 (344)
T 4gqb_B 224 PQQSEVFVFGDE--NGTVSLVDTKSTSCVLSSA---VHSQCVTGLVFSP-HSVPFLASLSEDCSLAVLDSSLSELFRS-Q 296 (344)
T ss_dssp SSCTTEEEEEET--TSEEEEEESCC--CCEEEE---CCSSCEEEEEECS-SSSCCEEEEETTSCEEEECTTCCEEEEE-C
T ss_pred CCCCcceEEecc--CCcEEEEECCCCcEEEEEc---CCCCCEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCcEEEE-c
Confidence 7 4555555554 4568999999999999887 56655 78887 55 4677899999999999999998865 6
Q ss_pred cccCCCceEEEeecCe-EEEEEE-cCeEEEEecccc
Q 016020 311 TEFMTPSAFIFLYENQ-LFLTFR-NRTVAVWNFRGE 344 (396)
Q Consensus 311 t~~~~PsAFiFly~~q-LFLTfs-~gti~iWd~~ge 344 (396)
+|...+.+.-|.++++ |+.|-+ ||+|.+|++..+
T Consensus 297 ~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 297 AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 8999999999999875 666777 599999999764
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.55 E-value=5.1e-13 Score=124.07 Aligned_cols=141 Identities=10% Similarity=0.171 Sum_probs=106.7
Q ss_pred CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhh-hcceeeEeecCCeeeEEEccc
Q 016020 227 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQ-FNEKLLVKQENENLQILDVRN 302 (396)
Q Consensus 227 ~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~-~~ekLLIKQed~~L~I~Dv~~ 302 (396)
..|..+.++|+-..++.... +..++|||+++|+.+..+. .|+.. ++|.+. .+.+|+....|+.+++||+.+
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~--D~~v~lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASG--DGTCALWDVESGQLLQSFH---GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp SCEEEEEECSSSSEEEEEET--TSEEEEEETTTCCEEEEEE---CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred CcEEEEEEeCCCCEEEEEeC--CCcEEEEeCCCCeEEEEEc---CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 44666677766544454444 5679999999999998887 66665 455442 467999999999999999999
Q ss_pred ceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeecccccc-----CCCCCCCcEEEccCCcE
Q 016020 303 AELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLW-----HPDCNTNNIYITSDQDL 372 (396)
Q Consensus 303 ~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~-----~~~c~~n~~~it~~qd~ 372 (396)
++++.+...|.....+.-|.+++++++|-+. |+|++||++. ..+..+..+... ....+++.+.+++..|=
T Consensus 230 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 230 GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY 306 (354)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC
Confidence 9999999999999999999999999999987 9999999987 455555443211 12256677776666653
No 28
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.55 E-value=3.5e-13 Score=123.53 Aligned_cols=183 Identities=11% Similarity=0.127 Sum_probs=144.8
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE-EE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV-FY 267 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s-~~ 267 (396)
+.|++ +|+.++..+.|+.++|||+.+.+.+..+.. ..|..+.++|+-.+++.... ...++||++.+++.... ..
T Consensus 61 ~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--d~~v~iw~~~~~~~~~~~~~ 137 (340)
T 1got_B 61 MHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL--DNICSIYNLKTREGNVRVSR 137 (340)
T ss_dssp EEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEET--TCEEEEEETTTCSBSCEEEE
T ss_pred EEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeC--CCeEEEEECccCCCcceeEE
Confidence 56776 789999999999999999999999888875 67999999988777777766 46789999998753221 12
Q ss_pred eecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 268 HLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 268 ~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
.+..|... +.|.+ +.+|+....|+.+++||+.+++.+.+..+|...+.+..|.++++++++-+. |+|.+||++.
T Consensus 138 ~~~~h~~~v~~~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~ 215 (340)
T 1got_B 138 ELAGHTGYLSCCRFLD--DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215 (340)
T ss_dssp EEECCSSCEEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EecCCCccEEEEEECC--CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 22255555 55654 456999999999999999999999999999999999999999999999886 9999999976
Q ss_pred -ceeeeeccccccCC---CCCCCcEEEccCCcEEEEecc
Q 016020 344 -ELVTSFEDHLLWHP---DCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 344 -eL~t~fedh~l~~~---~c~~n~~~it~~qd~ii~~~~ 378 (396)
+.+..|..|..... ..|++++++|...|=-|....
T Consensus 216 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd 254 (340)
T 1got_B 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254 (340)
T ss_dssp CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 67788888765432 266788888877764444433
No 29
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.7e-12 Score=120.51 Aligned_cols=225 Identities=14% Similarity=0.087 Sum_probs=159.6
Q ss_pred eeccccceEEEecCCCCceEEEEeeec-CCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeE
Q 016020 113 FSRETNRRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFV 191 (396)
Q Consensus 113 f~~~t~~~ic~lN~s~~evIrsifyN~-~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfV 191 (396)
++ .+|+.+..+...+...|.+|=++. +..-|++.| .|. ..+.-.++....|........+. --...--+
T Consensus 48 w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s---~dg----~v~vwd~~~~~~~~~~~~~~~~~--h~~~v~~~ 117 (437)
T 3gre_A 48 GN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGS---DQG----VIKIWNLKEIIVGEVYSSSLTYD--CSSTVTQI 117 (437)
T ss_dssp GG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEE---TTS----EEEEEEHHHHHTTCCCSCSEEEE--CSSCEEEE
T ss_pred cc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEec---CCc----eEEEeECcccccCcccceeeecc--CCCCEEEE
Confidence 54 678999999888888999999998 666665544 333 34445555554454222221221 11122346
Q ss_pred EeeCCCCcEEEeecCCCeEEEEecc---CceEEEEeccCceEEEEEcC-----------------CeEEEEEecCCCeee
Q 016020 192 EFDDVNGKVLTYSAQDSIYKVFDLK---NYTMLYSISDKHVQEIKISP-----------------GIMLLIFNRSSSHVP 251 (396)
Q Consensus 192 EFDd~NgkIlt~~a~d~~YrVwdlk---nYs~lysIs~~~VqEIkiSp-----------------g~~Ll~~q~~~~~ip 251 (396)
.|.+ +|+.++..+.|+.++|||+. +.+.+.......+..+.++| |.+| +.... .-.
T Consensus 118 ~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~--d~~ 193 (437)
T 3gre_A 118 TMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL-VALTN--LSR 193 (437)
T ss_dssp EECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE-EEEET--TSE
T ss_pred EEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE-EEEeC--CCe
Confidence 8887 88899999999999999994 66666666656677777664 4444 44433 467
Q ss_pred eEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecc-cccCCCceEEE----ee
Q 016020 252 LKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR-TEFMTPSAFIF----LY 323 (396)
Q Consensus 252 lkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~-t~~~~PsAFiF----ly 323 (396)
++|||+.+|+.+..+.... |... +.|.+ .+.+|++...|+.|+|||+++++++.... .+.....+..| .+
T Consensus 194 i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~ 271 (437)
T 3gre_A 194 VIIFDIRTLERLQIIENSP-RHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGK 271 (437)
T ss_dssp EEEEETTTCCEEEEEECCG-GGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCT
T ss_pred EEEEeCCCCeeeEEEccCC-CCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCC
Confidence 8999999999999887321 3344 78877 69999999999999999999999988654 55556677744 45
Q ss_pred cCeEEEEEEc-CeEEEEeccc-ceeeeecccc
Q 016020 324 ENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHL 353 (396)
Q Consensus 324 ~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~ 353 (396)
+++++++-+. |+|.+||++. +.+..+..|-
T Consensus 272 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 272 NSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp TEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC
Confidence 6778888876 8999999984 7777888774
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.55 E-value=2.3e-12 Score=123.30 Aligned_cols=264 Identities=13% Similarity=0.228 Sum_probs=187.0
Q ss_pred ccceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 88 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
...|..+.+. ...++.....|....|+. +++.+-.+. .+..-|.++-++.....|++.| .|. .++.-..+-
T Consensus 262 ~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~~---~d~--~i~~w~~~~ 334 (577)
T 2ymu_A 262 SSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASAS---DDK--TVKLWNRNG 334 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEEC-CCSSCEEEEEECTTSSEEEEEE---TTS--CEEEEETTS
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEe-cCCCCeEEEEECCCCCEEEEEe---CCC--eEEEEeCCC
Confidence 3455555444 235666667778888884 566666664 4455677888888777776643 222 222211100
Q ss_pred hhhhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEE
Q 016020 166 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIF 243 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~ 243 (396)
+.++ .+. ..-...--+.|.+ +|+.++....|+.+++||. +.+.+..+.+ ..|..+++||+-..|+.
T Consensus 335 ~~~~---------~~~-~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 402 (577)
T 2ymu_A 335 QHLQ---------TLT-GHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS 402 (577)
T ss_dssp CEEE---------EEC-CCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CeeE---------EEe-CCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 0000 000 0001112367877 8999999999999999995 5677777775 78999999987666666
Q ss_pred ecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEE
Q 016020 244 NRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFI 320 (396)
Q Consensus 244 q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFi 320 (396)
... .-.++||+ .+|+.+..+. .|+.. +.|.+ .+++|++...|+.+++||+ +++++.....|...+.+.-
T Consensus 403 ~~~--d~~v~~~~-~~~~~~~~~~---~~~~~v~~~~~s~-d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~ 474 (577)
T 2ymu_A 403 ASD--DKTVKLWN-RNGQLLQTLT---GHSSSVWGVAFSP-DDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVA 474 (577)
T ss_dssp EET--TSEEEEEC-TTCCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEE
T ss_pred EeC--CCEEEEEe-CCCCEEEEec---CCCCCeEEEEECC-CCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEE
Confidence 555 35678999 5788887776 55555 67877 8899999999999999995 7788888889999999999
Q ss_pred EeecCeEEEEEEc-CeEEEEecccceeeeeccccccCC---CCCCCcEEEccCCcEEEEecc
Q 016020 321 FLYENQLFLTFRN-RTVAVWNFRGELVTSFEDHLLWHP---DCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 321 Fly~~qLFLTfs~-gti~iWd~~geL~t~fedh~l~~~---~c~~n~~~it~~qd~ii~~~~ 378 (396)
|.+++++++|.+. ++|++||..|+++..++.|-.... ..|++++.+|+..|=.|.-..
T Consensus 475 ~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 9999999999887 899999999999999998865432 267888888888775555444
No 31
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.54 E-value=1e-12 Score=118.26 Aligned_cols=258 Identities=11% Similarity=0.094 Sum_probs=180.7
Q ss_pred cceEEEeeccc---hhhhhhccccceeeec----cccc------eEEEecCC---------CCceEEEEeeecCCCeEEE
Q 016020 89 TKVIEIVAARD---IVFALAHSGVCAAFSR----ETNR------RICFLNVS---------PDEVIRSLFYNKNNDSLIT 146 (396)
Q Consensus 89 S~V~EIv~a~d---ii~~L~~sG~c~af~~----~t~~------~ic~lN~s---------~~evIrsifyN~~n~slI~ 146 (396)
.+|.-+....| +++.-...|....|+. .+++ ..+.+... +..-|.++-++.+..-|++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 44555554433 6777777899999999 8888 56655542 4557899999987666665
Q ss_pred EEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeec-ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec
Q 016020 147 VSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE-SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS 225 (396)
Q Consensus 147 vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~-~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs 225 (396)
.+ .|. .++... ..| .++..-. .-...--+.|++ +|+.++..+.|+.+++||+.+.+.+..+.
T Consensus 126 ~~---~dg--~i~i~~------~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 126 GV---ENG--ELRLWN------KTG-----ALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp EE---TTS--CEEEEE------TTS-----CEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred Ee---CCC--eEEEEe------CCC-----CeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 33 222 233221 111 1111110 011122467877 78888888899999999999999988887
Q ss_pred cC--c---------------eEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcce
Q 016020 226 DK--H---------------VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEK 285 (396)
Q Consensus 226 ~~--~---------------VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ek 285 (396)
.. . +..+.++|+-.+++... ...+.+|++.+++.+..+. .+... +.|.+ .+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~i~~~d~~~~~~~~~~~---~~~~~i~~~~~~~-~~~~ 261 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP---KGAIFVYQITEKTPTGKLI---GHHGPISVLEFND-TNKL 261 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEECG---GGCEEEEETTCSSCSEEEC---CCSSCEEEEEEET-TTTE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC---CCeEEEEEcCCCceeeeec---cCCCceEEEEECC-CCCE
Confidence 62 2 88999998877655544 3679999999999888776 44444 77777 7889
Q ss_pred eeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccccccCC---CCC
Q 016020 286 LLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHP---DCN 360 (396)
Q Consensus 286 LLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~---~c~ 360 (396)
|++...|+.|++||+.+++.......+...+.+..|.+++ ++++.+. |+|.+||++. +++..+..|..... ..+
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC
Confidence 9999999999999999999999888899999999999999 6666655 9999999976 67777776643322 256
Q ss_pred CCcEEEccCCc
Q 016020 361 TNNIYITSDQD 371 (396)
Q Consensus 361 ~n~~~it~~qd 371 (396)
+++++++...|
T Consensus 341 ~~~~l~~~~~d 351 (425)
T 1r5m_A 341 DGQKYAVAFMD 351 (425)
T ss_dssp TSSEEEEEETT
T ss_pred CCCEEEEEECC
Confidence 67777766665
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.54 E-value=5e-13 Score=122.31 Aligned_cols=179 Identities=14% Similarity=0.157 Sum_probs=139.4
Q ss_pred CCCCcEEEeecCCCeEEEEeccCc-------eEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 195 DVNGKVLTYSAQDSIYKVFDLKNY-------TMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 195 d~NgkIlt~~a~d~~YrVwdlknY-------s~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
+.+|+.|+..+.|+++||||+.+. ..+..+.+ ..|..+.++|+-.+++.... +..++|||+++|+.+..
T Consensus 36 ~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~--D~~v~lwd~~~~~~~~~ 113 (343)
T 2xzm_R 36 NEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW--DKTLRLWDLRTGTTYKR 113 (343)
T ss_dssp TCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET--TSEEEEEETTSSCEEEE
T ss_pred CCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC--CCcEEEEECCCCcEEEE
Confidence 347899999999999999999753 35556655 78999999987766666665 67899999999999988
Q ss_pred EEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEec--ccccCCCceEEEeecC----------eEEEE
Q 016020 266 FYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS--RTEFMTPSAFIFLYEN----------QLFLT 330 (396)
Q Consensus 266 ~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~--~t~~~~PsAFiFly~~----------qLFLT 330 (396)
+. .|... +.|.+ .+.+|+....|+.+++||+......... ..+.....+.-|.+++ +++++
T Consensus 114 ~~---~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s 189 (343)
T 2xzm_R 114 FV---GHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFAS 189 (343)
T ss_dssp EE---CCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEE
T ss_pred Ec---CCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEE
Confidence 77 56565 78887 7899999999999999999865544432 3677778888888876 67888
Q ss_pred EEc-CeEEEEecccceeeeeccccccCC---CCCCCcEEEccCCcEEEEeccC
Q 016020 331 FRN-RTVAVWNFRGELVTSFEDHLLWHP---DCNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 331 fs~-gti~iWd~~geL~t~fedh~l~~~---~c~~n~~~it~~qd~ii~~~~~ 379 (396)
.+. |+|.+||..+++...+..|.-+.. ..|++++++|...|=.|.....
T Consensus 190 ~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 190 VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 776 999999988888888888865432 2678888888877755444443
No 33
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.53 E-value=4.1e-12 Score=113.38 Aligned_cols=224 Identities=10% Similarity=0.111 Sum_probs=164.1
Q ss_pred chhhhhhccccceeeeccccc--eEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC
Q 016020 99 DIVFALAHSGVCAAFSRETNR--RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 176 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~--~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~ 176 (396)
.++++-...|....||..+++ .+..+. .+..-|.++-++.+.+.|++.| .|. .++.-.+ ..++.
T Consensus 21 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~---~dg--~i~vwd~-----~~~~~--- 86 (372)
T 1k8k_C 21 TQIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCG---TDR--NAYVWTL-----KGRTW--- 86 (372)
T ss_dssp SEEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEE---TTS--CEEEEEE-----ETTEE---
T ss_pred CEEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEc---CCC--eEEEEEC-----CCCee---
Confidence 355555678999999999987 566665 4566788899998777666643 222 2333322 11110
Q ss_pred Cccee-ecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce---EEEEec---cCceEEEEEcCCeEEEEEecCCCe
Q 016020 177 FALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSIS---DKHVQEIKISPGIMLLIFNRSSSH 249 (396)
Q Consensus 177 ~~LF~-~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs---~lysIs---~~~VqEIkiSpg~~Ll~~q~~~~~ 249 (396)
.+.+. ...-...--+.|++ +|+.++....|+.+++||+.+.+ ....+. ...|..+.++|+-.+++.... .
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d 163 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC--D 163 (372)
T ss_dssp EEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET--T
T ss_pred eeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC--C
Confidence 00111 00111233577887 78889989999999999999876 344442 378999999987665566554 4
Q ss_pred eeeEEEEee------------------cCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEe
Q 016020 250 VPLKILSIE------------------DGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEV 308 (396)
Q Consensus 250 iplkIl~Ie------------------tG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v 308 (396)
..++|||+. +|+.+..+. .+... +.|.+ .+++|+....|+.|++||+.+++.+..
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS---SSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC---CCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecC---CCCCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 578999954 788877765 44444 77777 788999999999999999999999999
Q ss_pred cccccCCCceEEEeecCeEEEEEEcCeEEEEeccc
Q 016020 309 SRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG 343 (396)
Q Consensus 309 ~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g 343 (396)
...+..++.+..|.++++++.+-++|.|.+||.+.
T Consensus 240 ~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 240 LASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred EccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 89998899999999999999998889999999986
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.3e-12 Score=118.85 Aligned_cols=244 Identities=12% Similarity=0.144 Sum_probs=171.6
Q ss_pred cccceEEEeec--cchhhhhhccccceeeeccc----cceEEEecCCCCceEEEEeeecC-CCeEEEEEeEecCCCceee
Q 016020 87 KRTKVIEIVAA--RDIVFALAHSGVCAAFSRET----NRRICFLNVSPDEVIRSLFYNKN-NDSLITVSVYASDNFSSLK 159 (396)
Q Consensus 87 ~RS~V~EIv~a--~dii~~L~~sG~c~af~~~t----~~~ic~lN~s~~evIrsifyN~~-n~slI~vSv~~sd~~s~L~ 159 (396)
...+|..+-.. ..++++-...|....||..+ .+.+..+.. +..-|.++-++.. ..-|++.| .|. .
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~---~dg--~-- 137 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGG---NNG--E-- 137 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEEC---SSS--C--
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEc---CCC--e--
Confidence 35667777665 34666666789999999887 346666654 5556778888876 44444422 222 1
Q ss_pred eEeeehhhhhhCCCCC-CCcceee----cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--------
Q 016020 160 CRSTKIEYIRRGKPDS-GFALFES----ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-------- 226 (396)
Q Consensus 160 cr~~~~~~i~~gk~~~-~~~LF~~----~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-------- 226 (396)
+.+=++..++... ....+.. ..-...--+.|++.++..++....|+.+++||+++.+.+..+..
T Consensus 138 ---v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 138 ---IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIK 214 (416)
T ss_dssp ---EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCC
T ss_pred ---EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccC
Confidence 2222333332100 0011111 11122345789886689999999999999999999999988874
Q ss_pred CceEEEEEcCCe--EEEEEecCCCeeeeEEEEeecCc-EEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEc
Q 016020 227 KHVQEIKISPGI--MLLIFNRSSSHVPLKILSIEDGT-VLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDV 300 (396)
Q Consensus 227 ~~VqEIkiSpg~--~Ll~~q~~~~~iplkIl~IetG~-~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv 300 (396)
..|..+.++|+- +|+..........++|||+.+++ .+..+. ..+... +.|.+..+.+|++...|+.|++||+
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN--QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC--SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee--cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence 569999999863 44444443333489999999984 444332 023333 7888878999999999999999999
Q ss_pred ccceEEEecccccCCCceEEEeecC-eEEEEEEc-CeEEEEeccc
Q 016020 301 RNAELMEVSRTEFMTPSAFIFLYEN-QLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 301 ~~~ki~~v~~t~~~~PsAFiFly~~-qLFLTfs~-gti~iWd~~g 343 (396)
.+++.+.....|...+.+..|.+++ +++++-+. |+|.+||++.
T Consensus 293 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 293 ESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp SSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred CCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 9999999999999999999999998 78888876 9999999987
No 35
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.53 E-value=6.7e-13 Score=120.93 Aligned_cols=179 Identities=11% Similarity=0.151 Sum_probs=139.9
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCc-----eEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNY-----TMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknY-----s~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
+.|.+..+..++..+.|+++++||+.+. ..+.++.+ ..|..+.++|+-.+++.... +..++|||+++|+.+
T Consensus 23 l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~--D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 23 LATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW--DKTLRLWDVATGETY 100 (319)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEE
T ss_pred EEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC--CCEEEEEECCCCCee
Confidence 4677767789999999999999999753 24555554 78999999988777777665 678999999999998
Q ss_pred EEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecC------eEEEEEEc-
Q 016020 264 KVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN------QLFLTFRN- 333 (396)
Q Consensus 264 ~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~------qLFLTfs~- 333 (396)
..+. .|... ++|.+ .+..|+....|+.+++||+.. ++.....+|.....+..|.+.. .++++-+.
T Consensus 101 ~~~~---~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 175 (319)
T 3frx_A 101 QRFV---GHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGND 175 (319)
T ss_dssp EEEE---CCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETT
T ss_pred EEEc---cCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCC
Confidence 8877 66665 67777 789999999999999999975 5556667888888999998854 46777776
Q ss_pred CeEEEEeccc-ceeeeeccccccCC---CCCCCcEEEccCCcEEEEe
Q 016020 334 RTVAVWNFRG-ELVTSFEDHLLWHP---DCNTNNIYITSDQDLIISY 376 (396)
Q Consensus 334 gti~iWd~~g-eL~t~fedh~l~~~---~c~~n~~~it~~qd~ii~~ 376 (396)
++|++||++. ++...+..|..... ..|++++++|...|=.|-.
T Consensus 176 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp SCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 9999999987 67788888855432 2677888888777744433
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.53 E-value=2.9e-14 Score=129.08 Aligned_cols=183 Identities=11% Similarity=0.081 Sum_probs=130.3
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCc--eEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNY--TMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknY--s~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
-+.|++ +|+.++..+.|+.++|||+.+. +.+..+.+ ..|..++++|+--+|+.... +..++||++++|+....
T Consensus 16 ~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 16 EHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ--DRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET--TSSEEEC------CCCC
T ss_pred EEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC--CCeEEEEEcCCCCceee
Confidence 357787 8999999999999999999998 77777765 78999999987555555554 46799999999982222
Q ss_pred EEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccce---EEEeccc-ccCCCceEEEeecCeEEEEEEc-CeEE
Q 016020 266 FYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAE---LMEVSRT-EFMTPSAFIFLYENQLFLTFRN-RTVA 337 (396)
Q Consensus 266 ~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~k---i~~v~~t-~~~~PsAFiFly~~qLFLTfs~-gti~ 337 (396)
...+..+... +.|.+ .+.+|++...|+.+++||+.+++ +...... |...+.+.-|.++++++++-+. |+|.
T Consensus 93 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp EEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred eeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 2223355555 77777 78999999999999999999987 3444444 8999999999999999888876 8999
Q ss_pred EEecc-------------------cceeeeeccccccCC---CCCCCcEEEccCCcEEEEec
Q 016020 338 VWNFR-------------------GELVTSFEDHLLWHP---DCNTNNIYITSDQDLIISYC 377 (396)
Q Consensus 338 iWd~~-------------------geL~t~fedh~l~~~---~c~~n~~~it~~qd~ii~~~ 377 (396)
+||++ ++++..+ .|.-+.. .++++++++|...|=-|.-.
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 99985 5666666 6643322 26788888887777444333
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.53 E-value=2.3e-12 Score=113.77 Aligned_cols=267 Identities=11% Similarity=0.082 Sum_probs=188.0
Q ss_pred ccceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 88 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
..+|.-+... ..++++-...|....||..+++.+..+... ..-|.++-++...+.|++.| .|. .++.-
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~---~dg--~i~iw---- 101 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGH-TGTIWSIDVDCFTKYCVTGS---ADY--SIKLW---- 101 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEE---TTT--EEEEE----
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhc-CCcEEEEEEcCCCCEEEEEe---CCC--eEEEE----
Confidence 4455555554 345666677899999999999999888654 45678888887766666543 232 22222
Q ss_pred hhhhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCC-----CeEEEEeccCceEEEEe-----------cc---
Q 016020 166 EYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYTMLYSI-----------SD--- 226 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d-----~~YrVwdlknYs~lysI-----------s~--- 226 (396)
++..|+ .+..-..-..+--+.|++ +|+.++....+ +.+++||+.+.+....+ ..
T Consensus 102 -d~~~~~-----~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 102 -DVSNGQ-----CVATWKSPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp -ETTTCC-----EEEEEECSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred -ECCCCc-----EEEEeecCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 222222 222222222344578888 78888888877 99999999887532211 11
Q ss_pred -CceEEEEEcCCeEEEEEecCCCeeeeEEEEeec-CcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcc
Q 016020 227 -KHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVR 301 (396)
Q Consensus 227 -~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~Iet-G~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~ 301 (396)
..+..+.++|+-.+++.... ...+.+||+.+ ++.+..+. .+... +.|.+ .+.+|++...|+.|++||+.
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHK--DGKISKYDVSNNYEYVDSID---LHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEET--TSEEEEEETTTTTEEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred ccceeEEEEcCCCCEEEEEcC--CCEEEEEECCCCcEeEEEEe---cCCCceeEEEECC-CCCEEEEecCCceEEEEECC
Confidence 18999999987666666555 46789999999 67777666 34444 77887 78999999999999999999
Q ss_pred cceEEEecccccCCCceEEEeecCeEEEEEEc-C--------------eEEEEeccc-ceeeeeccccccCC---CCCCC
Q 016020 302 NAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-R--------------TVAVWNFRG-ELVTSFEDHLLWHP---DCNTN 362 (396)
Q Consensus 302 ~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-g--------------ti~iWd~~g-eL~t~fedh~l~~~---~c~~n 362 (396)
++++..... +...+.+..|.++++.+++-.. + .+.+||... +.+..+..|.-... .++++
T Consensus 249 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 249 TLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCC
Confidence 999888665 6677888999999998887776 4 899999987 67888887754432 26788
Q ss_pred cEEEccCCcEEEEecc
Q 016020 363 NIYITSDQDLIISYCK 378 (396)
Q Consensus 363 ~~~it~~qd~ii~~~~ 378 (396)
++++|...|=-|...+
T Consensus 328 ~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 328 TSYASGGEDGFIRLHH 343 (369)
T ss_dssp SEEEEEETTSEEEEEE
T ss_pred CEEEEEcCCCeEEEEE
Confidence 8888887775444443
No 38
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.53 E-value=6.1e-12 Score=117.17 Aligned_cols=255 Identities=9% Similarity=0.124 Sum_probs=181.4
Q ss_pred chhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc
Q 016020 99 DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA 178 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~ 178 (396)
+.+++.+..|....||..+|+....+...+...|.++-++...+-|++.+ .|. .++.-. +..|+ .
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~---~dg--~i~iwd-----~~~~~-----~ 168 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL---GNG--LVDIYD-----VESQT-----K 168 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE---TTS--CEEEEE-----TTTCC-----E
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC---CCC--eEEEEE-----CcCCe-----E
Confidence 44666778899999999999999999988889999999998666555533 222 222221 12221 1
Q ss_pred ceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEecc-CceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeee
Q 016020 179 LFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPL 252 (396)
Q Consensus 179 LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlk-nYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~ipl 252 (396)
+..-. .|.+ -+.| ++..++..+.|+.+++||++ ....+..+.+ ..|..+.++|+-.+++.... ...+
T Consensus 169 ~~~~~--~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~v 241 (401)
T 4aez_A 169 LRTMA--GHQARVGCLSW---NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN--DNVV 241 (401)
T ss_dssp EEEEC--CCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET--TSCE
T ss_pred EEEec--CCCCceEEEEE---CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC--CCeE
Confidence 11110 2222 2445 56799999999999999999 4556666654 78999999987666666555 4578
Q ss_pred EEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeE---eecCCeeeEEEcccceEEEecccccCCCceEEEeecCe
Q 016020 253 KILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLV---KQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 253 kIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLI---KQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q 326 (396)
+|||+.+++.+..+. .+... +.|.+ .+.+|++ +..|+.|++||+.+++.+.... +...+.+..|.++++
T Consensus 242 ~iwd~~~~~~~~~~~---~~~~~v~~~~~~p-~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 242 QIWDARSSIPKFTKT---NHNAAVKAVAWCP-WQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSK 316 (401)
T ss_dssp EEEETTCSSEEEEEC---CCSSCCCEEEECT-TSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSS
T ss_pred EEccCCCCCccEEec---CCcceEEEEEECC-CCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCC
Confidence 999999999988776 34433 78887 5555655 4489999999999999888765 446789999999999
Q ss_pred EEEEEE---cCeEEEEeccc-ceee--eeccccccCC---CCCCCcEEEccCCcEEEEeccCC
Q 016020 327 LFLTFR---NRTVAVWNFRG-ELVT--SFEDHLLWHP---DCNTNNIYITSDQDLIISYCKAE 380 (396)
Q Consensus 327 LFLTfs---~gti~iWd~~g-eL~t--~fedh~l~~~---~c~~n~~~it~~qd~ii~~~~~~ 380 (396)
++++.+ +|+|.+||.+. ++.. .+..|..... ..+++.+++|+..|=.|...+..
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 999876 69999999988 3333 4556654332 26678888877777555555544
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.53 E-value=5e-12 Score=115.67 Aligned_cols=235 Identities=13% Similarity=0.123 Sum_probs=158.2
Q ss_pred ceEEEeeccchhhhhhccccceeeeccccc--eEEEecCC-CCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 016020 90 KVIEIVAARDIVFALAHSGVCAAFSRETNR--RICFLNVS-PDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (396)
Q Consensus 90 ~V~EIv~a~dii~~L~~sG~c~af~~~t~~--~ic~lN~s-~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 166 (396)
+|.-+-+..++++.-...|....||..+++ .+..+... +..-|++|=++....-|++.| .|. .++.-.. +
T Consensus 16 ~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s---~D~--~v~iw~~--~ 88 (330)
T 2hes_X 16 KIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS---FDS--TVSIWAK--E 88 (330)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE---TTS--CEEEEEC---
T ss_pred ceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe---CCC--cEEEEEc--c
Confidence 344444455666666677899999988764 45566444 788899999998777665543 232 2332221 1
Q ss_pred hhhhCCCC--CCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEecc----CceEEEEecc--CceEEEEEc
Q 016020 167 YIRRGKPD--SGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLK----NYTMLYSISD--KHVQEIKIS 235 (396)
Q Consensus 167 ~i~~gk~~--~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlk----nYs~lysIs~--~~VqEIkiS 235 (396)
.++.. ...++.. .-.|.+ -+.|++ +|+.|+..+.|+.+++||+. .++++..+.+ ..|..+.++
T Consensus 89 ---~~~~~~~~~~~~~~--~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 89 ---ESADRTFEMDLLAI--IEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp ---------CCCEEEEE--EC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred ---cCcCccccceeEEE--EcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 11100 1111110 112333 467887 79999999999999999994 3567777765 779999999
Q ss_pred CCeEEEEEecCCCeeeeEEEEeecC--cEEEEEEeecccCCc---cchhhhh-cceeeEeecCCeeeEEEcccc------
Q 016020 236 PGIMLLIFNRSSSHVPLKILSIEDG--TVLKVFYHLLHRNKK---VDFIEQF-NEKLLVKQENENLQILDVRNA------ 303 (396)
Q Consensus 236 pg~~Ll~~q~~~~~iplkIl~IetG--~~l~s~~~~L~~sk~---i~FiE~~-~ekLLIKQed~~L~I~Dv~~~------ 303 (396)
|+-.+|+.... +..++||++.++ +.+..+. .|... ++|.+.. +..|+....|+.++|||+.++
T Consensus 163 p~~~~l~s~s~--D~~i~iW~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 163 PSEALLASSSY--DDTVRIWKDYDDDWECVAVLN---GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp SSSSEEEEEET--TSCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred CCCCEEEEEcC--CCeEEEEECCCCCeeEEEEcc---CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 87766677666 567899999988 4555554 56555 6777632 457889999999999999876
Q ss_pred --eEEEeccc-ccCCCceEEEeecCeEEEEEE-cCeEEEEeccc
Q 016020 304 --ELMEVSRT-EFMTPSAFIFLYENQLFLTFR-NRTVAVWNFRG 343 (396)
Q Consensus 304 --ki~~v~~t-~~~~PsAFiFly~~qLFLTfs-~gti~iWd~~g 343 (396)
++..+... |...+.+.-|.+++ ++++.+ +|+|.+||...
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET
T ss_pred eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC
Confidence 44444444 77888888898666 555555 59999999875
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.52 E-value=1e-12 Score=117.20 Aligned_cols=184 Identities=9% Similarity=0.103 Sum_probs=143.5
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
-+.|++ +|+.++....|+.++|||+.+.+ .+..+.+ ..|..+.++|+--+++.... ...++||++++|+....
T Consensus 13 ~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 13 CHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT--DRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp EEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET--TSCEEEEEEETTEEEEE
T ss_pred EEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC--CCeEEEEECCCCeeeee
Confidence 467887 78999999999999999999987 8888865 78999999976655555554 46799999999987666
Q ss_pred EEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccce----EEEecccccCCCceEEEeecCeEEEEEEc-CeEE
Q 016020 266 FYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVA 337 (396)
Q Consensus 266 ~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~k----i~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~ 337 (396)
+.. ..+... +.|.+ .+.+|++...|+.+++||+.+++ +......+...+.+..|.++++++++-+. |+|.
T Consensus 90 ~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 167 (372)
T 1k8k_C 90 LVI-LRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR 167 (372)
T ss_dssp EEC-CCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEe-ecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEE
Confidence 552 244444 77777 78999999999999999999987 45566778889999999999999888875 9999
Q ss_pred EEecc-------------------cceeeeeccccccCCC---CCCCcEEEccCCcEEEEecc
Q 016020 338 VWNFR-------------------GELVTSFEDHLLWHPD---CNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 338 iWd~~-------------------geL~t~fedh~l~~~~---c~~n~~~it~~qd~ii~~~~ 378 (396)
+||++ ++++..+..|.-+... .++++.+++..+|=.|....
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred EEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 99974 5778888777543222 56777777777664444443
No 41
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1e-12 Score=118.24 Aligned_cols=245 Identities=16% Similarity=0.191 Sum_probs=175.1
Q ss_pred ccceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 88 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
...|..+... ..++++-...|....|| .+++.+..+.. +..-|.++-++..+..|++.+. |. .++. .++
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~--~i~i--wd~ 178 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGTHIISMDV---EN--VTIL--WNV 178 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSSEEEEEET---TC--CEEE--EET
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCCEEEEEec---CC--eEEE--EEC
Confidence 3467777666 34777778889999999 77888888864 4556788988887777776442 22 2222 211
Q ss_pred hhhhhCCCCCCCcceeec-----------ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEE
Q 016020 166 EYIRRGKPDSGFALFESE-----------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEI 232 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~~-----------~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEI 232 (396)
..|+.-.....-... .-...--+.|.+ ++. ++....++.+++||+++.+.+..+.. ..|..+
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~ 253 (425)
T 1r5m_A 179 ---ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDK-FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVL 253 (425)
T ss_dssp ---TTTEEEEEECCC---------------CCCBSCCEEEE-TTE-EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEE
T ss_pred ---CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-CCE-EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEE
Confidence 111110000000000 000023355555 455 55567799999999999998877764 789999
Q ss_pred EEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEec
Q 016020 233 KISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS 309 (396)
Q Consensus 233 kiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~ 309 (396)
.++|+--+++.... ...++||++.+|+.+..+. .+... +.|.+ .+ +|++...|+.|++||+.+++.+...
T Consensus 254 ~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 254 EFNDTNKLLLSASD--DGTLRIWHGGNGNSQNCFY---GHSQSIVSASWVG-DD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EEETTTTEEEEEET--TSCEEEECSSSBSCSEEEC---CCSSCEEEEEEET-TT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEcC--CCEEEEEECCCCccceEec---CCCccEEEEEECC-CC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 99987655555554 4568999999999988876 34444 67777 45 9999999999999999999999999
Q ss_pred ccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-c--------------------eeeeecccc
Q 016020 310 RTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-E--------------------LVTSFEDHL 353 (396)
Q Consensus 310 ~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-e--------------------L~t~fedh~ 353 (396)
..+...+.+..|.++++++++-+. |+|.+||++. + ++..+..|.
T Consensus 327 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (425)
T 1r5m_A 327 IVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQ 392 (425)
T ss_dssp ECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTT
T ss_pred ccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcc
Confidence 999999999999999999888876 8999999987 6 778888773
No 42
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.6e-13 Score=124.42 Aligned_cols=248 Identities=11% Similarity=0.106 Sum_probs=168.5
Q ss_pred ccceEEEeecc---chhhhhhccccceeeeccc---cc-eEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeee
Q 016020 88 RTKVIEIVAAR---DIVFALAHSGVCAAFSRET---NR-RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKC 160 (396)
Q Consensus 88 RS~V~EIv~a~---dii~~L~~sG~c~af~~~t---~~-~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~c 160 (396)
...|..+.+.. .+++.-...|....||..+ ++ ..|.+...+..-|.+|-++...+.|++.| .|. .++.
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~dg--~i~v 137 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS---KDG--QIIV 137 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE---TTS--EEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe---CCC--EEEE
Confidence 35666666655 4777777889999999877 54 22333334677899999998666666543 222 2332
Q ss_pred EeeehhhhhhCCCCCCCcceee-----cccC---CCCeE---E--eeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-
Q 016020 161 RSTKIEYIRRGKPDSGFALFES-----ESLK---WPGFV---E--FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD- 226 (396)
Q Consensus 161 r~~~~~~i~~gk~~~~~~LF~~-----~~l~---~PgfV---E--FDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~- 226 (396)
-.+ +.-..|+.- ..+.. ..+. +.+++ . +. .+|..++....|+.+++||+++.+.+..+..
T Consensus 138 wd~--~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 138 LKV--NHYQQESEV---KFLNCECIRKINLKNFGKNEYAVRMRAFVN-EEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp EEE--EEEEETTEE---EEEEEEEEEEEEGGGGSSCCCEEEEEEEEC-SSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEe--ccccCCcee---eccccceeEEEEccCcccccCceEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 222 111111110 00000 0000 11111 1 22 3688999999999999999999999999975
Q ss_pred ---CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---c----chhhhhcceeeEeecCCeee
Q 016020 227 ---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---V----DFIEQFNEKLLVKQENENLQ 296 (396)
Q Consensus 227 ---~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i----~FiE~~~ekLLIKQed~~L~ 296 (396)
..|..+.++|+-.+|+.... +..++|||+.+|+.+..+.+ .+... + .|.+ .+.+|+....|+.|+
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~s~-~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTT--RGIIDIWDIRFNVLIRSWSF--GDHAPITHVEVCQFYGK-NSVIVVGGSSKTFLT 286 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEET--TSCEEEEETTTTEEEEEEBC--TTCEEEEEEEECTTTCT-TEEEEEEESTTEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcC--CCeEEEEEcCCccEEEEEec--CCCCceEEEEeccccCC-CccEEEEEcCCCcEE
Confidence 78999999988777676666 46789999999999998762 33334 4 3333 577999999999999
Q ss_pred EEEcccceEEEecccccCC--------------------------CceEEEeecCeEEEEEEc-CeEEEEeccc-ceeee
Q 016020 297 ILDVRNAELMEVSRTEFMT--------------------------PSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTS 348 (396)
Q Consensus 297 I~Dv~~~ki~~v~~t~~~~--------------------------PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~ 348 (396)
|||+.++++..+..++... ..+.-|. ++++++|-+. |+|.+||++. +....
T Consensus 287 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 287 IWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp EEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred EEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceE
Confidence 9999999998877655433 3455666 6788888885 9999999986 66666
Q ss_pred eccc
Q 016020 349 FEDH 352 (396)
Q Consensus 349 fedh 352 (396)
+..|
T Consensus 366 ~~~~ 369 (437)
T 3gre_A 366 VISP 369 (437)
T ss_dssp EECC
T ss_pred Eecc
Confidence 7665
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.52 E-value=2.7e-12 Score=117.54 Aligned_cols=222 Identities=13% Similarity=0.073 Sum_probs=156.7
Q ss_pred cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 98 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
...+++-...|....||..+++.+..+. .+..-|.++-++...+.|++.| .|. .+ +.- ++..|+.
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s---~d~--~i--~iw---d~~~~~~---- 173 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSS---QDM--QL--KIW---SVKDGSN---- 173 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETT-SSSSCEEEEEECTTSSEEEEEE---TTS--EE--EEE---ETTTCCC----
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeecc-cccCccEEEEECCCCCEEEEEe---CCC--eE--EEE---eCCCCcC----
Confidence 3467777788999999999998877765 4556788899998777666543 222 22 222 2333332
Q ss_pred cceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-----CceEEEEE---------------
Q 016020 178 ALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KHVQEIKI--------------- 234 (396)
Q Consensus 178 ~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-----~~VqEIki--------------- 234 (396)
+..- -.|.+ -+.|++ +|+.++..+.|+.+++||+++.+.+..+.. ..|..+.+
T Consensus 174 -~~~~--~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 174 -PRTL--IGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp -CEEE--ECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred -ceEE--cCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 1110 12444 367887 788888899999999999999999999864 44555554
Q ss_pred ------cCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcc-eeeEeecCCeeeEEEcccce
Q 016020 235 ------SPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNE-KLLVKQENENLQILDVRNAE 304 (396)
Q Consensus 235 ------Spg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~e-kLLIKQed~~L~I~Dv~~~k 304 (396)
||+-.+++.... ...++|||+.+|+.+..+.. ++... +.|.+ .+. +|++...|+.|++||+.+++
T Consensus 250 v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHV--SGVITVHNVFSKEQTIQLPS--KFTCSCNSLTVDG-NNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp CCTTCSSCTTEEEEEEET--TSCEEEEETTTCCEEEEECC--TTSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTT
T ss_pred ccceEEcCCCCEEEEEcC--CCeEEEEECCCCceeEEccc--ccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEEcCCCc
Confidence 555444555444 45689999999998887642 34443 78887 555 99999999999999999975
Q ss_pred E-EEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 305 L-MEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 305 i-~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
. +.....+...|-..++.+++++++|.+. |+|.+||+..
T Consensus 325 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 325 CPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp SCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred CchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 3 5555554445555567788999998886 8999999876
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.5e-13 Score=121.79 Aligned_cols=262 Identities=14% Similarity=0.137 Sum_probs=181.0
Q ss_pred hccccceeeeccccceE-EEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceee-
Q 016020 105 AHSGVCAAFSRETNRRI-CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES- 182 (396)
Q Consensus 105 ~~sG~c~af~~~t~~~i-c~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~- 182 (396)
...|....||..+++.. +........-|.++-++.+..-|++.+ .|. .++.-.+ +....| ..++..-
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg--~v~vw~~--~~~~~~----~~~~~~~~ 110 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL---DNG--SLELYST--NEANNA----INSMARFS 110 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE---SSS--CEEEECC--SSTTSC----CCEEEECC
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc---cCC--eEEEeec--cccccc----ccchhhcc
Confidence 56678889998888632 333334667789999987766665533 222 2322222 111111 1111111
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce------EEEEe-----ccCceEEEEEcCC-eEEEEEecCCCee
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT------MLYSI-----SDKHVQEIKISPG-IMLLIFNRSSSHV 250 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs------~lysI-----s~~~VqEIkiSpg-~~Ll~~q~~~~~i 250 (396)
..-...--+.|++.++..++..+.|+.++|||+.+.+ ..+.+ ....|..+.++|+ -.+++.... ..
T Consensus 111 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg 188 (416)
T 2pm9_A 111 NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS--SN 188 (416)
T ss_dssp CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS--SS
T ss_pred CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC--CC
Confidence 1111233578988668899999999999999999987 55555 3378999999986 444455444 46
Q ss_pred eeEEEEeecCcEEEEEEeeccc---CCc---cchhhhhcceeeEeecCC---eeeEEEcccc-eEEEecc-cccCCCceE
Q 016020 251 PLKILSIEDGTVLKVFYHLLHR---NKK---VDFIEQFNEKLLVKQENE---NLQILDVRNA-ELMEVSR-TEFMTPSAF 319 (396)
Q Consensus 251 plkIl~IetG~~l~s~~~~L~~---sk~---i~FiE~~~ekLLIKQed~---~L~I~Dv~~~-ki~~v~~-t~~~~PsAF 319 (396)
.++|||+.+|+.+..+...-.. ... +.|.+.-...|++..+|+ .|++||+.++ +...... .|...+.+.
T Consensus 189 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 268 (416)
T 2pm9_A 189 FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSL 268 (416)
T ss_dssp CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEE
T ss_pred CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEE
Confidence 6999999999998887732100 233 788874346788888988 9999999996 6666766 888999999
Q ss_pred EEee-cCeEEEEEEc-CeEEEEeccc-ceeeeeccccccCCC---CCCC-cEEEccCCcEEEEeccC
Q 016020 320 IFLY-ENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHPD---CNTN-NIYITSDQDLIISYCKA 379 (396)
Q Consensus 320 iFly-~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~~---c~~n-~~~it~~qd~ii~~~~~ 379 (396)
.|.+ +++++++-+. |+|.+||++. +.+..+..|.-+... ++++ .+++|...|=-|...+.
T Consensus 269 ~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 269 DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp EECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred EeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 9999 8888888886 9999999986 788888887655433 6777 78888887755554443
No 45
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.52 E-value=4e-12 Score=119.36 Aligned_cols=231 Identities=16% Similarity=0.288 Sum_probs=165.7
Q ss_pred cccceEEEeeccchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 016020 87 KRTKVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (396)
Q Consensus 87 ~RS~V~EIv~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 166 (396)
....|..+-...++++.-...|....||..+++.+..+.. +...|.++-++. +.+++.| .|. .++.-.+
T Consensus 158 h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~--~~l~s~s---~dg--~i~~wd~--- 226 (445)
T 2ovr_B 158 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHE--KRVVSGS---RDA--TLRVWDI--- 226 (445)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEET--TEEEEEE---TTS--EEEEEES---
T ss_pred CCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECC-CCCcEEEEEecC--CEEEEEe---CCC--EEEEEEC---
Confidence 3456777777778888888999999999999999988874 445667787763 4444432 222 2332222
Q ss_pred hhhhCCCCCCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEE
Q 016020 167 YIRRGKPDSGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLL 241 (396)
Q Consensus 167 ~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll 241 (396)
..| .++..- -.|.+ -+.| +|..++..+.|+.+++||+++.+.+.++.+ ..|..+.+ +|..++
T Consensus 227 --~~~-----~~~~~~--~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~ 293 (445)
T 2ovr_B 227 --ETG-----QCLHVL--MGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVV 293 (445)
T ss_dssp --SSC-----CEEEEE--ECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEE
T ss_pred --CCC-----cEEEEE--cCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEE
Confidence 222 222111 12333 3445 578888889999999999999999999976 77999999 454444
Q ss_pred EEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEeccc---ccCCCce
Q 016020 242 IFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT---EFMTPSA 318 (396)
Q Consensus 242 ~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t---~~~~PsA 318 (396)
.... ...+++||+.+|+.+..+. .+...+.-+...+++|++...|+.|++||+.+++....... +...+.+
T Consensus 294 ~~~~---d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 367 (445)
T 2ovr_B 294 SGSL---DTSIRVWDVETGNCIHTLT---GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 367 (445)
T ss_dssp EEET---TSCEEEEETTTCCEEEEEC---CCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEE
T ss_pred EEeC---CCeEEEEECCCCCEEEEEc---CCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEE
Confidence 4333 3568999999999998876 55556555555788999999999999999999998887665 5566666
Q ss_pred EEEeecCeEEEEEEc-CeEEEEeccc-ceeeee
Q 016020 319 FIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSF 349 (396)
Q Consensus 319 FiFly~~qLFLTfs~-gti~iWd~~g-eL~t~f 349 (396)
+-| +++++++-+. |+|.+||++. +++..+
T Consensus 368 ~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 368 LQF--NKNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEE--CSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEE--CCCEEEEEeCCCeEEEEECCCCceeeee
Confidence 666 4567777664 9999999985 677666
No 46
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.51 E-value=6.7e-12 Score=109.73 Aligned_cols=232 Identities=12% Similarity=0.118 Sum_probs=160.2
Q ss_pred CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCcEEEe
Q 016020 127 SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPG---FVEFDDVNGKVLTY 203 (396)
Q Consensus 127 s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~ 203 (396)
.+.+.|.++-++..+.-|++.+ |. .++. - ++..++... ++..-....+++ .+.|++ +|+.++.
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~----dg--~i~i--w---~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 114 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG----KG--CVKV--W---DISHPGNKS--PVSQLDCLNRDNYIRSCKLLP-DGCTLIV 114 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC----BS--EEEE--E---ETTSTTCCS--CSEEEECSCTTSBEEEEEECT-TSSEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC----CC--eEEE--E---ECCCCCcee--eeecccccCCCCcEEEEEEcC-CCCEEEE
Confidence 4677888898887666555422 32 2222 2 222222111 121111112333 467888 7888888
Q ss_pred ecCCCeEEEEeccCce--EEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---c
Q 016020 204 SAQDSIYKVFDLKNYT--MLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---V 276 (396)
Q Consensus 204 ~a~d~~YrVwdlknYs--~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i 276 (396)
...|+.+++||+.+.+ ....+.. ..|..+.++|+-.+++.... ...+++|++.+|+.+..+. .+... +
T Consensus 115 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~~~~~~---~~~~~i~~~ 189 (337)
T 1gxr_A 115 GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQ---GHTDGASCI 189 (337)
T ss_dssp EESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEEC---CCSSCEEEE
T ss_pred EcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCceeeeee---cccCceEEE
Confidence 8999999999999987 5555554 67999999987655555554 3568999999999988876 34444 6
Q ss_pred chhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEecccceeeeecccccc
Q 016020 277 DFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRGELVTSFEDHLLW 355 (396)
Q Consensus 277 ~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~geL~t~fedh~l~ 355 (396)
.|.+ .+++|++...|+.+++||+.+++..... .+...+.+..|.++++++++-+. |.|.+||++......+..|.-.
T Consensus 190 ~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 267 (337)
T 1gxr_A 190 DISN-DGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESC 267 (337)
T ss_dssp EECT-TSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSC
T ss_pred EECC-CCCEEEEEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccc
Confidence 7777 7889999999999999999999888764 35567888999999998888775 9999999998544455555433
Q ss_pred CC---CCCCCcEEEccCCcEEEEeccC
Q 016020 356 HP---DCNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 356 ~~---~c~~n~~~it~~qd~ii~~~~~ 379 (396)
.. .+++++++++...|=.|...+.
T Consensus 268 v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 268 VLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 22 2667777777766644444443
No 47
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.51 E-value=7e-12 Score=110.48 Aligned_cols=243 Identities=9% Similarity=0.103 Sum_probs=161.4
Q ss_pred cceEEEeec---cchhhhhhccccceeeeccccc-----eEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeee
Q 016020 89 TKVIEIVAA---RDIVFALAHSGVCAAFSRETNR-----RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKC 160 (396)
Q Consensus 89 S~V~EIv~a---~dii~~L~~sG~c~af~~~t~~-----~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~c 160 (396)
..|..|-+. .++++--..-|....||..+++ ....+ ..+..-|.++-++.+..-|++.| .|. .++.
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~V~~~~~s~dg~~l~s~~---~d~--~i~~ 112 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHFVSDVVISSDGQFALSGS---WDG--TLRL 112 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSCEEEEEECTTSSEEEEEE---TTS--EEEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCCEEEEEECCCCCEEEEEc---ccc--cceE
Confidence 345555443 2355555566888889866543 22234 34566788999987766666533 232 2222
Q ss_pred EeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec---cCceEEEEEcCC
Q 016020 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS---DKHVQEIKISPG 237 (396)
Q Consensus 161 r~~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs---~~~VqEIkiSpg 237 (396)
... ..+...........+........++..++..+.|+.+++||+......-... ...+..++++++
T Consensus 113 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 113 WDL----------TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp EET----------TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred Eee----------cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 211 1112222222222222233333467778888899999999998876543332 278899999865
Q ss_pred e--EEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccc
Q 016020 238 I--MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE 312 (396)
Q Consensus 238 ~--~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~ 312 (396)
. .+++.... ...+++|++.+++.+..+. .|+.. +.|.+ .+.+|++...|+.+++||+.+.+.+.....+
T Consensus 183 ~~~~~~~s~~~--d~~i~i~d~~~~~~~~~~~---~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 256 (340)
T 4aow_A 183 SSNPIIVSCGW--DKLVKVWNLANCKLKTNHI---GHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 256 (340)
T ss_dssp SSSCEEEEEET--TSCEEEEETTTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECS
T ss_pred CCCcEEEEEcC--CCEEEEEECCCCceeeEec---CCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCC
Confidence 3 33344433 4568999999999988776 56666 67777 7899999999999999999999998876655
Q ss_pred cCCCceEEEeecCeEEEEEEcCeEEEEeccc-ceeeeeccccc
Q 016020 313 FMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-ELVTSFEDHLL 354 (396)
Q Consensus 313 ~~~PsAFiFly~~qLFLTfs~gti~iWd~~g-eL~t~fedh~l 354 (396)
..+.+..|.+++.++.+..+++|.+||+++ .++..+..+..
T Consensus 257 -~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 298 (340)
T 4aow_A 257 -DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVI 298 (340)
T ss_dssp -SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC--
T ss_pred -ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccce
Confidence 467888899998888888889999999998 46666665443
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.51 E-value=2.2e-12 Score=114.12 Aligned_cols=243 Identities=13% Similarity=0.156 Sum_probs=163.1
Q ss_pred EecCCCCceEEEEeeecC---CCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeeccc-CCC---CeEEeeC
Q 016020 123 FLNVSPDEVIRSLFYNKN---NDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESL-KWP---GFVEFDD 195 (396)
Q Consensus 123 ~lN~s~~evIrsifyN~~---n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l-~~P---gfVEFDd 195 (396)
.+-..+..-|.+|=++.. ++.+++++ .+++ .++..... .|+. ...+....- .+. --+.|.+
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~--~~~~--~v~vw~~~-----~~~~---~~~~~~~~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFAT--VGSN--RVTLYECH-----SQGE---IRLLQSYVDADADENFYTCAWTY 79 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEE--EETT--EEEEEEEC-----GGGC---EEEEEEEECSCTTCCEEEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEE--CCCC--EEEEEEcC-----CCcE---EEeeeeccccCCCCcEEEEEecc
Confidence 555667777888888853 56666633 2333 23333322 1110 001111100 011 1245555
Q ss_pred C---CCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecCcEEEEEEee
Q 016020 196 V---NGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL 269 (396)
Q Consensus 196 ~---NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~ 269 (396)
. +|+.++....|+.++|||+.+.+.+..+.+ ..|..++++| +-.+++.... ...++||++.+|+.+..+..+
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK--DHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET--TSCEEEEETTTTEEEEEECST
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC--CCeEEEEEeecCeEEEEeccc
Confidence 2 278999999999999999999999999875 8899999998 5444455544 467999999999998887422
Q ss_pred cccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEeccc----------------------------ccCCCce
Q 016020 270 LHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT----------------------------EFMTPSA 318 (396)
Q Consensus 270 L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t----------------------------~~~~PsA 318 (396)
-.+... +.|.+ .+++|++...|+.|++||+.+++....... +.....+
T Consensus 158 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 158 EGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred ccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 245555 77777 789999999999999999999876654333 7778888
Q ss_pred EEEeecCeEEEEEEc-CeEEEEeccc---------------ceeeeeccccccCC---CCCC--CcEEEccCCcEEEEec
Q 016020 319 FIFLYENQLFLTFRN-RTVAVWNFRG---------------ELVTSFEDHLLWHP---DCNT--NNIYITSDQDLIISYC 377 (396)
Q Consensus 319 FiFly~~qLFLTfs~-gti~iWd~~g---------------eL~t~fedh~l~~~---~c~~--n~~~it~~qd~ii~~~ 377 (396)
.-|. ++++++-+. |+|.+||.+. .++..++.|..... .+++ ++++++...|=.|.-.
T Consensus 237 ~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 237 VRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp EEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred EEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence 8888 566666665 9999999876 23566666643322 2556 7888888777656555
Q ss_pred cCCCC
Q 016020 378 KAEPE 382 (396)
Q Consensus 378 ~~~~~ 382 (396)
.....
T Consensus 315 d~~~~ 319 (366)
T 3k26_A 315 DLEVE 319 (366)
T ss_dssp ECCSS
T ss_pred ECCCC
Confidence 55543
No 49
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.51 E-value=4.9e-12 Score=119.07 Aligned_cols=261 Identities=11% Similarity=0.137 Sum_probs=177.6
Q ss_pred ceEEEeeccchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhh
Q 016020 90 KVIEIVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIR 169 (396)
Q Consensus 90 ~V~EIv~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~ 169 (396)
.|.-+-.-.+.+++-...|...+||..+++.+..+.... .-|.++-++ ++.|++.| .|. .++.-. +.
T Consensus 135 ~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~--~~~l~sg~---~dg--~i~vwd-----~~ 201 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHT-GSVLCLQYD--ERVIITGS---SDS--TVRVWD-----VN 201 (435)
T ss_dssp CEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCS-SCEEEEECC--SSEEEEEE---TTS--CEEEEE-----SS
T ss_pred cEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCC-CcEEEEEEC--CCEEEEEc---CCC--eEEEEE-----CC
Confidence 344444456777888889999999999999998887544 455667663 34444322 232 222222 12
Q ss_pred hCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEE---EEecc--CceEEEEEcCCeEEEEEe
Q 016020 170 RGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML---YSISD--KHVQEIKISPGIMLLIFN 244 (396)
Q Consensus 170 ~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~l---ysIs~--~~VqEIkiSpg~~Ll~~q 244 (396)
.|+ .+.. .-.|.+-|--=..++..++..+.|+.++|||+.+.+.+ ..+.+ ..|..+.+.+..+ +...
T Consensus 202 ~~~-----~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~s~~ 273 (435)
T 1p22_A 202 TGE-----MLNT--LIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI-VSAS 273 (435)
T ss_dssp SCC-----EEEE--ECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEE-EEEE
T ss_pred CCc-----EEEE--EcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEE-EEEe
Confidence 222 1111 11233333222224557888889999999999987744 33333 7889999955543 3332
Q ss_pred cCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeec
Q 016020 245 RSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYE 324 (396)
Q Consensus 245 ~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~ 324 (396)
. +..++|||+.+|+.+..+. .+...+.-+...+++|++...|+.|++||+.+++++.+..+|...+.+..| +
T Consensus 274 -~--dg~i~vwd~~~~~~~~~~~---~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~ 345 (435)
T 1p22_A 274 -G--DRTIKVWNTSTCEFVRTLN---GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--D 345 (435)
T ss_dssp -T--TSEEEEEETTTCCEEEEEE---CCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--C
T ss_pred -C--CCeEEEEECCcCcEEEEEc---CCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--c
Confidence 2 4678999999999999887 666665555557889999999999999999999999999999988888888 6
Q ss_pred CeEEEEEEc-CeEEEEeccc-c---------eeeeeccccccCCC-CCCCcEEEccCCcEEEEeccC
Q 016020 325 NQLFLTFRN-RTVAVWNFRG-E---------LVTSFEDHLLWHPD-CNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 325 ~qLFLTfs~-gti~iWd~~g-e---------L~t~fedh~l~~~~-c~~n~~~it~~qd~ii~~~~~ 379 (396)
++++++-+. |+|.+||++. + .+..+..|.-.... +.+++.++|...|=-|...+.
T Consensus 346 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 346 NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC-
T ss_pred CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEEC
Confidence 667777665 9999999976 3 67778887665433 336667777776655544443
No 50
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.51 E-value=5.2e-12 Score=117.65 Aligned_cols=238 Identities=11% Similarity=0.150 Sum_probs=171.6
Q ss_pred ccceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 88 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
...|..+-.. ..++++-...|....||..+++.+..+.. +...|.++-++. +.+++.| .| ..++...
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~--~~l~~~~---~d--g~i~i~d--- 202 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSWNR--HVLSSGS---RS--GAIHHHD--- 202 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEEET--TEEEEEE---TT--SEEEEEE---
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEECC--CEEEEEc---CC--CCEEEEe---
Confidence 4567666665 34777777889999999999999998874 455566676653 4443322 22 2233222
Q ss_pred hhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeE
Q 016020 166 EYIRRGKPDSGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIM 239 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~ 239 (396)
++.+ +.++- ....|++ -+.|.+ +|+.++....|+.++|||+++.+.++.+.. ..|..+.++| |-.
T Consensus 203 --~~~~----~~~~~--~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 273 (401)
T 4aez_A 203 --VRIA----NHQIG--TLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSN 273 (401)
T ss_dssp --TTSS----SCEEE--EEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTT
T ss_pred --cccC----cceee--EEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCC
Confidence 2211 11111 0112333 467888 899999999999999999999999998865 7899999998 556
Q ss_pred EEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeE--eecCCeeeEEEcccceEEEe--cccccCC
Q 016020 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNAELMEV--SRTEFMT 315 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLI--KQed~~L~I~Dv~~~ki~~v--~~t~~~~ 315 (396)
+++.........+++||+.+|+.+..+.+. ..-..+.|.+ .+.+|++ +.+++.|+|||+.+++...+ ..+|...
T Consensus 274 ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 274 LLATGGGTMDKQIHFWNAATGARVNTVDAG-SQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp EEEEECCTTTCEEEEEETTTCCEEEEEECS-SCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred EEEEecCCCCCEEEEEECCCCCEEEEEeCC-CcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 666655334678999999999999988621 1122377877 7888988 66999999999999877765 5688899
Q ss_pred CceEEEeecCeEEEEEEc-CeEEEEeccc-ceee
Q 016020 316 PSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVT 347 (396)
Q Consensus 316 PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t 347 (396)
+.+..|.++++++++.+. |+|.+||+.. +++.
T Consensus 352 v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 352 VLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp CCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 999999999999888876 9999999986 5444
No 51
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.50 E-value=2.4e-12 Score=117.31 Aligned_cols=175 Identities=9% Similarity=0.117 Sum_probs=136.8
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
+.|.+ +|+.++..+.|+++||||+++.+.+..+.+ ..|..+.++|+-.+++.... +..++||++. |+.+..+.
T Consensus 71 ~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--D~~i~vwd~~-~~~~~~~~- 145 (319)
T 3frx_A 71 CTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR--DKTIKVWTIK-GQCLATLL- 145 (319)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET--TSCEEEEETT-SCEEEEEC-
T ss_pred EEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECC-CCeEEEEe-
Confidence 46776 788999999999999999999999888876 78999999988776677666 5679999995 55655543
Q ss_pred ecccCCc---cchhhh-----hcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEE
Q 016020 269 LLHRNKK---VDFIEQ-----FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVW 339 (396)
Q Consensus 269 ~L~~sk~---i~FiE~-----~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iW 339 (396)
.|... +.|.+. .+..|+....|+.+++||+.+.++.....+|.....+..|.+++++++|-+. |+|.+|
T Consensus 146 --~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iw 223 (319)
T 3frx_A 146 --GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW 223 (319)
T ss_dssp --CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred --ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 55544 455442 3447999999999999999999999988899999999999999999999886 999999
Q ss_pred eccc-ceeeeeccccc--cCCCCCCCcEEEccCCcE
Q 016020 340 NFRG-ELVTSFEDHLL--WHPDCNTNNIYITSDQDL 372 (396)
Q Consensus 340 d~~g-eL~t~fedh~l--~~~~c~~n~~~it~~qd~ 372 (396)
|+.. +.+..+..|.. -....|++..+.++..+=
T Consensus 224 d~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 224 NLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp ETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE
T ss_pred ECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 9987 56666654422 112256666666655443
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.50 E-value=9.7e-13 Score=122.62 Aligned_cols=239 Identities=10% Similarity=0.062 Sum_probs=162.5
Q ss_pred ccccccccceEEEeec-cchhhhhhccccceeeeccccceEEEe---cCCCCceEEEEeeecCCCeEEEEEeEecCCCce
Q 016020 82 LPFLMKRTKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFL---NVSPDEVIRSLFYNKNNDSLITVSVYASDNFSS 157 (396)
Q Consensus 82 ~~~l~~RS~V~EIv~a-~dii~~L~~sG~c~af~~~t~~~ic~l---N~s~~evIrsifyN~~n~slI~vSv~~sd~~s~ 157 (396)
.....-...|..+.+. ++-+++-...|....||..+++.+... -..+...|.+|-++.+...|++.| .|. .
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs---~dg--~ 162 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG---KDF--S 162 (357)
T ss_dssp SEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE---TTS--C
T ss_pred cccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe---CCC--e
Confidence 3334455667777665 344555567788899999888766533 235677899999998877776644 222 2
Q ss_pred eeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc----CceE
Q 016020 158 LKCRSTKIEYIRRGKPDSGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD----KHVQ 230 (396)
Q Consensus 158 L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~----~~Vq 230 (396)
++. - +++.|+ ++..- -.|.+ -+.|.+.+..+++..+.|+.++|||+++.+.+..+.. ..+.
T Consensus 163 v~i--w---d~~~~~-----~~~~~--~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~ 230 (357)
T 4g56_B 163 VKV--W---DLSQKA-----VLKSY--NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPT 230 (357)
T ss_dssp EEE--E---ETTTTE-----EEEEE--CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEE
T ss_pred EEE--E---ECCCCc-----EEEEE--cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccccccc
Confidence 222 2 222222 11110 01222 3678776666888888999999999999987665542 5689
Q ss_pred EEEEcCC-eEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEE
Q 016020 231 EIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELM 306 (396)
Q Consensus 231 EIkiSpg-~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~ 306 (396)
.+.++|. -.+++.... ...++|||+.+|+.+..+. .+... +.|.+..+.+|+...+|+.|+|||+.+++++
T Consensus 231 ~v~~sp~~~~~la~g~~--d~~i~~wd~~~~~~~~~~~---~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 231 SVTWHPEKDDTFACGDE--TGNVSLVNIKNPDSAQTSA---VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp EEEECTTSTTEEEEEES--SSCEEEEESSCGGGCEEEC---CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred chhhhhcccceEEEeec--ccceeEEECCCCcEeEEEe---ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 9999974 344444433 4568999999999998876 45555 7787744456778999999999999999999
Q ss_pred EecccccCCCceEEEee-cCeEEEEEEc-CeEEEEeccc
Q 016020 307 EVSRTEFMTPSAFIFLY-ENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 307 ~v~~t~~~~PsAFiFly-~~qLFLTfs~-gti~iWd~~g 343 (396)
... +|...+.+.-|.| ++++++|-+. |+|.+||+..
T Consensus 306 ~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 306 RDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 875 6888999999997 7889999886 9999999865
No 53
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.49 E-value=1.4e-12 Score=115.46 Aligned_cols=236 Identities=8% Similarity=0.062 Sum_probs=164.8
Q ss_pred ceEEEeec--cchhhhhhccccceeeeccccc----eEEEecCCCCceEEEEeeecCCC-eEEEEEeEecCCCceeeeEe
Q 016020 90 KVIEIVAA--RDIVFALAHSGVCAAFSRETNR----RICFLNVSPDEVIRSLFYNKNND-SLITVSVYASDNFSSLKCRS 162 (396)
Q Consensus 90 ~V~EIv~a--~dii~~L~~sG~c~af~~~t~~----~ic~lN~s~~evIrsifyN~~n~-slI~vSv~~sd~~s~L~cr~ 162 (396)
.|..+-.. ..++++-...|....|+..+++ ..... ....-|.++-++.+.. .|++.+ .|. .++.-.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~---~dg--~i~~wd 85 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGT---VQG--EILKVD 85 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEE---TTS--CEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEc---CCC--eEEEEE
Confidence 34444433 3456666778999999998888 55554 5667889999987766 555533 222 222221
Q ss_pred eehhhh-hhCCCCCCCcceeecccC--CCC---eEEeeCCCCcEEEeecCCCeEEEEeccC---------ceEEEEecc-
Q 016020 163 TKIEYI-RRGKPDSGFALFESESLK--WPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKN---------YTMLYSISD- 226 (396)
Q Consensus 163 ~~~~~i-~~gk~~~~~~LF~~~~l~--~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlkn---------Ys~lysIs~- 226 (396)
+ ..++. ...-. |.+ -+.|++ +..++..+.|+.+++||+++ .+.+..+..
T Consensus 86 -----~~~~~~~--------~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 86 -----LIGSPSF--------QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp -----SSSSSSE--------EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred -----eccCCce--------EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeC
Confidence 2 12211 11111 333 467888 77888888999999999998 665655554
Q ss_pred CceEEEEEcCCeEEEEEecCCCeeeeEEEEeec-CcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEccc
Q 016020 227 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRN 302 (396)
Q Consensus 227 ~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~Iet-G~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~ 302 (396)
..|..+.++|+. +++. .. .-.+++|++.+ ++....... .++... +.|.+..+++|++...++.++|||+.+
T Consensus 151 ~~v~~~~~~~~~-l~~~-~~--d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVG-MN--NSQVQWFRLPLCEDDNGTIEE-SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp CCEEEEEECSSE-EEEE-ES--TTEEEEEESSCCTTCCCEEEE-CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred CceEEEEecCCc-EEEE-eC--CCeEEEEECCccccccceeee-cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 789999999998 3333 22 35689999999 775433221 133333 677765689999999999999999988
Q ss_pred c------eEEEecccccC---------CCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccc
Q 016020 303 A------ELMEVSRTEFM---------TPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDH 352 (396)
Q Consensus 303 ~------ki~~v~~t~~~---------~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh 352 (396)
+ +...+...+.. .+.+.-|.++++++++-+. |+|.+||.+. +++..+..|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc
Confidence 7 66666666654 8889999999998888876 8999999985 788888887
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.49 E-value=1.6e-12 Score=115.06 Aligned_cols=217 Identities=11% Similarity=0.145 Sum_probs=150.9
Q ss_pred cccceeeeccccceEEEecCCCCceEEEEeeecCC---CeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeec
Q 016020 107 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNN---DSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE 183 (396)
Q Consensus 107 sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n---~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~ 183 (396)
.|....||..+++........+..-|.++-++..+ .-|++.+ .|. .++.- ++..++ .++..
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---~dg--~i~iw-----d~~~~~----~~~~~-- 106 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD---FGG--NLHIW-----NLEAPE----MPVYS-- 106 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE---TTS--CEEEE-----CTTSCS----SCSEE--
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec---CCC--eEEEE-----eCCCCC----ccEEE--
Confidence 68999999999998877766677788899888763 4444422 232 22222 222222 01111
Q ss_pred ccCCCCeE---------EeeCCCCcEEEeecCCCeEEEEeccCce-EEEEecc------CceEEEE----EcCCeEEEEE
Q 016020 184 SLKWPGFV---------EFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISD------KHVQEIK----ISPGIMLLIF 243 (396)
Q Consensus 184 ~l~~PgfV---------EFDd~NgkIlt~~a~d~~YrVwdlknYs-~lysIs~------~~VqEIk----iSpg~~Ll~~ 243 (396)
.-.|.+-| .|++ +|+.++..+.|+.++|||+++.+ .+..+.. ..+..+. ++|+-.+++.
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred EEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 01233332 2344 78889999999999999999987 6666643 3788888 5655555555
Q ss_pred ecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhh--hcceeeEeecCCeeeEEEcccceEEEecc-----cccCCC
Q 016020 244 NRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNAELMEVSR-----TEFMTP 316 (396)
Q Consensus 244 q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~--~~ekLLIKQed~~L~I~Dv~~~ki~~v~~-----t~~~~P 316 (396)
... ...+++||+++++......+. ..-..+.|.+. .+++|++...|+.+++||+.+++...... ++...+
T Consensus 186 ~~~--d~~i~i~d~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v 262 (357)
T 3i2n_A 186 GYD--NGDIKLFDLRNMALRWETNIK-NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV 262 (357)
T ss_dssp EET--TSEEEEEETTTTEEEEEEECS-SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCE
T ss_pred Ecc--CCeEEEEECccCceeeecCCC-CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCE
Confidence 544 457899999999986654421 11122777775 78999999999999999999987655444 888899
Q ss_pred ceEEEeecCe-EEEEEEc-CeEEEEeccc
Q 016020 317 SAFIFLYENQ-LFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 317 sAFiFly~~q-LFLTfs~-gti~iWd~~g 343 (396)
.+..|.++++ ++++-+. |+|.+||++.
T Consensus 263 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 263 WQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 9999999988 7888776 9999999974
No 55
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.49 E-value=2.3e-13 Score=126.81 Aligned_cols=177 Identities=14% Similarity=0.204 Sum_probs=135.6
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCe-EEEEEecCCCeeeeEEEEeecCcEEEEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~IetG~~l~s~~ 267 (396)
+.|.+ +|+.|+..+.|+.++|||+++.+.+..+.+ ..|..++++|+- .+++.... +..++|||+++|+.+..+.
T Consensus 145 v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~--dg~v~~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 145 LSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGE--DGRILLWDTRKPKPATRID 221 (357)
T ss_dssp EEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEET--TSCEEECCTTSSSCBCBCC
T ss_pred EEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeecc--CCceEEEECCCCceeeeee
Confidence 57887 899999999999999999999999999876 789999999753 33444443 4568999999999887655
Q ss_pred eecccC--CccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecC-eEEEEEEc-CeEEEEeccc
Q 016020 268 HLLHRN--KKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN-QLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 268 ~~L~~s--k~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~-qLFLTfs~-gti~iWd~~g 343 (396)
..-+.. ..+.|.+..+..|++..+|+.|++||+.++++..+...+.....+.-|.+++ ++++|-+. |+|.|||.+.
T Consensus 222 ~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 222 FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred eccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 321221 1278888566778889999999999999999999999999999999999987 46667775 9999999997
Q ss_pred -ceeeeeccccccCCC---CC-CCcEEEccCCc
Q 016020 344 -ELVTSFEDHLLWHPD---CN-TNNIYITSDQD 371 (396)
Q Consensus 344 -eL~t~fedh~l~~~~---c~-~n~~~it~~qd 371 (396)
+++..+ .|--++.. .| ++++++|...|
T Consensus 302 ~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 302 SEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CEEEEEC-CCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCC
Confidence 566554 45433221 33 56666665544
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.49 E-value=7.3e-12 Score=117.23 Aligned_cols=184 Identities=14% Similarity=0.194 Sum_probs=141.3
Q ss_pred EeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEc--CCeEEEEEecCCCeeeeEEEEeecCcEEEE--
Q 016020 192 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKIS--PGIMLLIFNRSSSHVPLKILSIEDGTVLKV-- 265 (396)
Q Consensus 192 EFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiS--pg~~Ll~~q~~~~~iplkIl~IetG~~l~s-- 265 (396)
.|.+ ++ .++..+.|+.++|||+++.+.+..+.+ ..|..+.++ ++-.+++.... +..+++|++.+++....
T Consensus 169 ~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 169 KYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR--DNTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp EECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEET--TSCEEEEECCCCCCC----
T ss_pred EEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcC--CCcEEEeeCCCCccccccc
Confidence 4544 34 677778899999999999999999875 889999998 34344455544 46789999999886543
Q ss_pred ------------------EEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeE
Q 016020 266 ------------------FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQL 327 (396)
Q Consensus 266 ------------------~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qL 327 (396)
...+..+...+.-+...+.+|++...|+.|++||+.+++.+....+|...+.+..|.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKR 324 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTE
T ss_pred ccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCE
Confidence 22233555666656678899999999999999999999999999999999999999999998
Q ss_pred EEEEEc-CeEEEEecc-cceeeeeccccccCCC-CCCCcEEEccCCcEEEEeccC
Q 016020 328 FLTFRN-RTVAVWNFR-GELVTSFEDHLLWHPD-CNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 328 FLTfs~-gti~iWd~~-geL~t~fedh~l~~~~-c~~n~~~it~~qd~ii~~~~~ 379 (396)
+++-+. |+|.+||++ |+++..++.|..+... +.+++.++|...|=.|.....
T Consensus 325 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~ 379 (464)
T 3v7d_B 325 CISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDA 379 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEET
T ss_pred EEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEEC
Confidence 888887 999999996 5888899888655432 344667777666644444433
No 57
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.49 E-value=4.1e-13 Score=125.19 Aligned_cols=183 Identities=12% Similarity=0.136 Sum_probs=141.6
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEE----
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK---- 264 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~---- 264 (396)
+.|.+ +|+.|+..+.|+.+||||+.+.+.+..+.. ..|.++.++|+-.+++.... +..++||++.++....
T Consensus 72 ~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~--d~~v~iw~~~~~~~~~~~~~ 148 (380)
T 3iz6_a 72 LDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGL--DSACSIFNLSSQADRDGNMP 148 (380)
T ss_dssp EEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCS--SSCCEEEECCCCSSCCCSST
T ss_pred EEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeC--CCcEEEEECCCCccccCCcc
Confidence 56777 788899999999999999999999888876 77999999998888787776 6778999998753211
Q ss_pred EEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEec-----ccccCCCceEEEee-cCeEEEEEEc-C
Q 016020 265 VFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-----RTEFMTPSAFIFLY-ENQLFLTFRN-R 334 (396)
Q Consensus 265 s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~-----~t~~~~PsAFiFly-~~qLFLTfs~-g 334 (396)
....+-+|+.. +.|.+..+..|+....|+.+++||+.+++.+.+. ..|.....+.-|.+ ++++|+|-+. |
T Consensus 149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~ 228 (380)
T 3iz6_a 149 VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT 228 (380)
T ss_dssp TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS
T ss_pred ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC
Confidence 01112244444 6788766778999999999999999999988765 55666777777765 7888888886 9
Q ss_pred eEEEEecc-c-ceeeeeccccccCCC---CCCCcEEEccCCcEEEEe
Q 016020 335 TVAVWNFR-G-ELVTSFEDHLLWHPD---CNTNNIYITSDQDLIISY 376 (396)
Q Consensus 335 ti~iWd~~-g-eL~t~fedh~l~~~~---c~~n~~~it~~qd~ii~~ 376 (396)
+|.+||++ + +.+..+..|.-+... .|+++.++|+..|=-|--
T Consensus 229 ~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~l 275 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRL 275 (380)
T ss_dssp CEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEE
T ss_pred eEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEE
Confidence 99999997 3 677788888655433 678888888877744433
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.47 E-value=3.7e-12 Score=113.20 Aligned_cols=186 Identities=16% Similarity=0.231 Sum_probs=135.8
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEecc--CceEEEEecc--CceEEEEEcCC--eEEEEEecCCCeeeeEEEEeecCcEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSISD--KHVQEIKISPG--IMLLIFNRSSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlk--nYs~lysIs~--~~VqEIkiSpg--~~Ll~~q~~~~~iplkIl~IetG~~l~ 264 (396)
+.|++ +|+.++....|+.++|||+. +.+.+..+.+ ..|..+++++. -.+|+.... +..++||++++|+...
T Consensus 17 ~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~ 93 (379)
T 3jrp_A 17 AVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQ 93 (379)
T ss_dssp EEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--TSCEEEEEEETTEEEE
T ss_pred EEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc--CCEEEEEEcCCCceeE
Confidence 56777 78889989999999999999 7778888875 78999999854 333344444 4678999999998333
Q ss_pred EEEeecccCCc---cchhhhh-cceeeEeecCCeeeEEEcccce--EEEecccccCCCceEEEee-------------cC
Q 016020 265 VFYHLLHRNKK---VDFIEQF-NEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLY-------------EN 325 (396)
Q Consensus 265 s~~~~L~~sk~---i~FiE~~-~ekLLIKQed~~L~I~Dv~~~k--i~~v~~t~~~~PsAFiFly-------------~~ 325 (396)
...+. .+... +.|.+.. +.+|++...|+.|++||+.+++ .......+.....+..|.+ ++
T Consensus 94 ~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T 3jrp_A 94 IAVHA-VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 172 (379)
T ss_dssp EEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTT
T ss_pred eeeec-CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCC
Confidence 22221 34444 7777733 7899999999999999999973 3335567888889999999 58
Q ss_pred eEEEEEEc-CeEEEEeccc-c----eeeeeccccccCCC---CCC---CcEEEccCCcEEEEeccCC
Q 016020 326 QLFLTFRN-RTVAVWNFRG-E----LVTSFEDHLLWHPD---CNT---NNIYITSDQDLIISYCKAE 380 (396)
Q Consensus 326 qLFLTfs~-gti~iWd~~g-e----L~t~fedh~l~~~~---c~~---n~~~it~~qd~ii~~~~~~ 380 (396)
+++++-+. |+|.+||++. + ++..+..|..+... .|+ +++++|...|=.|......
T Consensus 173 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 173 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 88888775 9999999985 2 55677777543221 566 7888888777544444433
No 59
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.47 E-value=2e-11 Score=121.86 Aligned_cols=233 Identities=13% Similarity=0.162 Sum_probs=174.3
Q ss_pred cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 98 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
...+++-...|....||..+|+.+..+.. +..-|+++-++.....|++.|. |. ..+.-. +.. +.
T Consensus 25 ~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~---dg----~i~vw~---~~~-----~~ 88 (814)
T 3mkq_A 25 EPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIVGSD---DF----RIRVFN---YNT-----GE 88 (814)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEEEET---TS----EEEEEE---TTT-----CC
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCCEEEEEeC---CC----eEEEEE---CCC-----Cc
Confidence 34566667789999999999999998874 5566888999987777776442 22 222222 222 22
Q ss_pred cceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCc-eEEEEecc--CceEEEEEcC-CeEEEEEecCCCee
Q 016020 178 ALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNY-TMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHV 250 (396)
Q Consensus 178 ~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknY-s~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~i 250 (396)
.+..- -.|++ -+.|.+ +|+.++..+.|+.++|||+.+. .....+.+ ..|..+.++| +-.+++.... ..
T Consensus 89 ~~~~~--~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg 163 (814)
T 3mkq_A 89 KVVDF--EAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL--DR 163 (814)
T ss_dssp EEEEE--ECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET--TS
T ss_pred EEEEE--ecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC--CC
Confidence 22221 12444 467887 7888888889999999999987 66666654 7799999998 5545555554 45
Q ss_pred eeEEEEeecCcEEEEEEeecccCCc---cchhhh-hcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCe
Q 016020 251 PLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 251 plkIl~IetG~~l~s~~~~L~~sk~---i~FiE~-~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q 326 (396)
.+++|++.+|+....+.. ++... +.|.+. .+.+|++...|+.|++||+.+++.......+...+.+..|.++++
T Consensus 164 ~v~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp EEEEEETTCSSCSEEEEC--CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred eEEEEECCCCcceeEEec--CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 789999999998887662 33344 555542 678999999999999999999999999899999999999999999
Q ss_pred EEEEEEc-CeEEEEeccc-ceeeeecccc
Q 016020 327 LFLTFRN-RTVAVWNFRG-ELVTSFEDHL 353 (396)
Q Consensus 327 LFLTfs~-gti~iWd~~g-eL~t~fedh~ 353 (396)
++++-+. |+|.+||.+. +++..+..|.
T Consensus 242 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~ 270 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGL 270 (814)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCSS
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCC
Confidence 9998886 9999999986 6777776663
No 60
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.46 E-value=2.2e-11 Score=110.83 Aligned_cols=250 Identities=11% Similarity=0.089 Sum_probs=168.9
Q ss_pred hhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcce
Q 016020 101 VFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALF 180 (396)
Q Consensus 101 i~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF 180 (396)
+++-...|...+||..+++.+..+.... -++++-++.....|.+.+ ..|. . .+..+ +..|+ .+-
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~--~~d~--~--i~v~d---~~~~~-----~~~ 68 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVAN--AHSN--D--VSIID---TATNN-----VIA 68 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEE--GGGT--E--EEEEE---TTTTE-----EEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEEC--CCCC--e--EEEEE---CCCCe-----EEE
Confidence 3444567888999999999988887543 378899987766654422 1222 2 22222 22222 121
Q ss_pred eecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCe-EEEEEecCCCeeeeEEEEee
Q 016020 181 ESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 181 ~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~Ie 258 (396)
.-..-..|--+.|++.+..+++....++.+++||+.+.+.+..+.. ..+..+.++|+- .|++.... .-.+.+||+.
T Consensus 69 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~ 146 (391)
T 1l0q_A 69 TVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG--DKTVSVINTV 146 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT--TTEEEEEETT
T ss_pred EEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC--CCEEEEEECC
Confidence 1111125667889984444656677789999999999998888876 789999999764 44455544 3578999999
Q ss_pred cCcEEEEEEeecccCCccchhhhhcceee-EeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEE----c
Q 016020 259 DGTVLKVFYHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR----N 333 (396)
Q Consensus 259 tG~~l~s~~~~L~~sk~i~FiE~~~ekLL-IKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs----~ 333 (396)
+|+.+..+..- ..-..+.|.+ .+.+|+ ....++.|.+||+.++++...... ...|.+..|.++++.+++.+ +
T Consensus 147 ~~~~~~~~~~~-~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~ 223 (391)
T 1l0q_A 147 TKAVINTVSVG-RSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYF 223 (391)
T ss_dssp TTEEEEEEECC-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSC
T ss_pred CCcEEEEEecC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCC
Confidence 99998877631 1112377777 777885 556788999999999998876654 45788899999987655554 5
Q ss_pred CeEEEEeccc-ceeeeeccccccC--CCCCCCc-EEEccCCc
Q 016020 334 RTVAVWNFRG-ELVTSFEDHLLWH--PDCNTNN-IYITSDQD 371 (396)
Q Consensus 334 gti~iWd~~g-eL~t~fedh~l~~--~~c~~n~-~~it~~qd 371 (396)
+.|.+||.+. +.+..++.|.-.. ...++++ +|++...|
T Consensus 224 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d 265 (391)
T 1l0q_A 224 NTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX 265 (391)
T ss_dssp CEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred CcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC
Confidence 9999999986 6777776653221 1145554 55664433
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.46 E-value=2.4e-12 Score=119.27 Aligned_cols=187 Identities=16% Similarity=0.227 Sum_probs=136.6
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCc-------eEEEEecc--CceEEEEEcCCe-EEEEEecCCCeeeeEEEEeec
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNY-------TMLYSISD--KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIED 259 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknY-------s~lysIs~--~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~Iet 259 (396)
-+.|++.+|..++..+.|+.++|||+.+. +.+..+.+ ..|..+.++|+- .+|+.... +..++|||+++
T Consensus 86 ~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~ 163 (402)
T 2aq5_A 86 DIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC--DNVILVWDVGT 163 (402)
T ss_dssp EEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET--TSCEEEEETTT
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC--CCEEEEEECCC
Confidence 46788778999999999999999999998 45566654 889999999986 45555555 45689999999
Q ss_pred CcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEec-ccccCC-CceEEEeecCeEEEEE---
Q 016020 260 GTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-RTEFMT-PSAFIFLYENQLFLTF--- 331 (396)
Q Consensus 260 G~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~-~t~~~~-PsAFiFly~~qLFLTf--- 331 (396)
|+.+..+.. ..+... +.|.+ .+.+|++...|+.|+|||+++++..... ..+... +....|.++++++++-
T Consensus 164 ~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 164 GAAVLTLGP-DVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp TEEEEEECT-TTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECT
T ss_pred CCccEEEec-CCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccC
Confidence 999887721 134444 77887 8899999999999999999999988876 566555 8999999999988886
Q ss_pred -EcCeEEEEeccc-ce-eeeec-cccccCCC---CCCCc-EEEccCCcEEEEeccCC
Q 016020 332 -RNRTVAVWNFRG-EL-VTSFE-DHLLWHPD---CNTNN-IYITSDQDLIISYCKAE 380 (396)
Q Consensus 332 -s~gti~iWd~~g-eL-~t~fe-dh~l~~~~---c~~n~-~~it~~qd~ii~~~~~~ 380 (396)
.+|+|.+||++. +. +...+ +|...... .++++ ++++...|=-|......
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 569999999987 32 32222 23222111 34444 44565555444444443
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.46 E-value=2.1e-11 Score=114.52 Aligned_cols=250 Identities=13% Similarity=0.171 Sum_probs=170.5
Q ss_pred cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 98 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
.+.++.-...|.-.+||..+++.+..+.. +..-|.++-++ ++.+++.| .|. .++.-.+ ..|+
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~~---~dg--~i~vwd~-----~~~~----- 190 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DNIIISGS---TDR--TLKVWNA-----ETGE----- 190 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TTEEEEEE---TTS--CEEEEET-----TTTE-----
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CCEEEEEe---CCC--eEEEEEC-----CcCc-----
Confidence 56677778889999999999999998875 44556777776 34444422 232 2222221 1111
Q ss_pred cceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeee
Q 016020 178 ALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPL 252 (396)
Q Consensus 178 ~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~ipl 252 (396)
++.. .-.|.+ -+.|+ +..++..+.|+.+++||+.+.+.+..+.+ ..|..+.+.+. .++.... ...+
T Consensus 191 ~~~~--~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~---dg~i 261 (445)
T 2ovr_B 191 CIHT--LYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-RVVSGAY---DFMV 261 (445)
T ss_dssp EEEE--ECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSS-CEEEEET---TSCE
T ss_pred EEEE--ECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCC-EEEEEcC---CCEE
Confidence 1111 012333 23454 56688888999999999999999988875 78999999544 4433333 3578
Q ss_pred EEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEE
Q 016020 253 KILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFR 332 (396)
Q Consensus 253 kIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs 332 (396)
++||+.+|+.+..+. .+...+.-+...+.+|++...|+.|++||+.+++++.....+...+.++-+ +++++++-+
T Consensus 262 ~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 336 (445)
T 2ovr_B 262 KVWDPETETCLHTLQ---GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGN 336 (445)
T ss_dssp EEEEGGGTEEEEEEC---CCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEE
T ss_pred EEEECCCCcEeEEec---CCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEe
Confidence 999999999998887 555654434448899999999999999999999999988888887777665 455666666
Q ss_pred -cCeEEEEeccc-ceeeeecc---ccccCC-CCCCCcEEEccCCcEEEEeccC
Q 016020 333 -NRTVAVWNFRG-ELVTSFED---HLLWHP-DCNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 333 -~gti~iWd~~g-eL~t~fed---h~l~~~-~c~~n~~~it~~qd~ii~~~~~ 379 (396)
+|+|.+||++. +.+..+.. |..... -+.++++++|+..|=-|.-...
T Consensus 337 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 337 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEET
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEEC
Confidence 59999999965 77777776 322211 1234566666666644444443
No 63
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.45 E-value=3.2e-12 Score=113.08 Aligned_cols=247 Identities=12% Similarity=0.115 Sum_probs=160.4
Q ss_pred ceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCC-
Q 016020 119 RRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVN- 197 (396)
Q Consensus 119 ~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~N- 197 (396)
+.+..+..++..-|.++=++..+..+++++...+.+ ..++.-.+ ..|+. .++.....-..---+.|.+.+
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d-~~v~iw~~-----~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 78 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGT-GVIQLYEI-----QHGDL---KLLREIEKAKPIKCGTFGATSL 78 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCC-EEEEEEEE-----CSSSE---EEEEEEEESSCEEEEECTTCCT
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCC-cEEEEEeC-----CCCcc---cceeeecccCcEEEEEEcCCCC
Confidence 344455556777888888888777777644322112 23333322 12211 111111111122356787754
Q ss_pred -CcEEEeecCCCeEEEEeccCce-EEEEecc--CceEEEEE------cCCeEEEEEecCCCeeeeEEEEeecCc-EEEEE
Q 016020 198 -GKVLTYSAQDSIYKVFDLKNYT-MLYSISD--KHVQEIKI------SPGIMLLIFNRSSSHVPLKILSIEDGT-VLKVF 266 (396)
Q Consensus 198 -gkIlt~~a~d~~YrVwdlknYs-~lysIs~--~~VqEIki------Spg~~Ll~~q~~~~~iplkIl~IetG~-~l~s~ 266 (396)
|..++....|+.+++||+.+.+ .+..+.+ ..|..+.+ +|+--+++.... ...++||++.+++ .+..+
T Consensus 79 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~ 156 (357)
T 3i2n_A 79 QQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR--DGTVKVWDPRQKDDPVANM 156 (357)
T ss_dssp TTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET--TSCEEEECTTSCSSCSEEE
T ss_pred CCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC--CCeEEEEeCCCCCCcceec
Confidence 8999999999999999999988 7777765 78999965 444444455544 4678999999998 66666
Q ss_pred Eeeccc-CCc---cc----hhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEee---cCeEEEEEEc-C
Q 016020 267 YHLLHR-NKK---VD----FIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLY---ENQLFLTFRN-R 334 (396)
Q Consensus 267 ~~~L~~-sk~---i~----FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly---~~qLFLTfs~-g 334 (396)
...-.+ ... +. |.+ .+.+|++..+|+.|++||+.++++... ..+...+.+..|.+ +++++++-+. |
T Consensus 157 ~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 157 EPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp CCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred cccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 521111 112 33 334 889999999999999999999998654 56678899999998 7888777775 9
Q ss_pred eEEEEeccc-ceeeeec-----cccccCC---CCCCCc-EEEccCCcEEEEecc
Q 016020 335 TVAVWNFRG-ELVTSFE-----DHLLWHP---DCNTNN-IYITSDQDLIISYCK 378 (396)
Q Consensus 335 ti~iWd~~g-eL~t~fe-----dh~l~~~---~c~~n~-~~it~~qd~ii~~~~ 378 (396)
+|.+||++. +.+..+. .|.-... .++++. +++|...|=.|.-..
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence 999999987 4444443 5533322 256676 788877774444443
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.45 E-value=2e-11 Score=111.37 Aligned_cols=258 Identities=13% Similarity=0.155 Sum_probs=169.4
Q ss_pred ceEEEeecc---chhhhhhccccceeeeccccceEEEecC-CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 90 KVIEIVAAR---DIVFALAHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 90 ~V~EIv~a~---dii~~L~~sG~c~af~~~t~~~ic~lN~-s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
+|.-+.... .+++.-...|....||..+++..+.+.. .+..-|.++=++..+..++.++ ..|. .++.- .+
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~--~~d~--~i~iw--d~ 148 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS--SIRG--ATTLR--DF 148 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE--ETTT--EEEEE--ET
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE--eCCC--EEEEE--EC
Confidence 344444442 3667777789999999999999998874 6778899999987554555422 2332 22222 22
Q ss_pred hhhhhCCCCCCCcceeec--ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeE-E
Q 016020 166 EYIRRGKPDSGFALFESE--SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIM-L 240 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~~--~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~-L 240 (396)
+ ++ ....+... .-.+.--+.|.+ +|+.++....|+.+++||+ +.+.+..+.+ ..|..+.++|+-- +
T Consensus 149 ~----~~---~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 149 S----GS---VIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp T----SC---EEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred C----CC---ceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 1 11 00111110 012234677887 8899999999999999999 5777888775 7899999998865 5
Q ss_pred EEEecCCCeeeeEEEEeec----CcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEeccccc
Q 016020 241 LIFNRSSSHVPLKILSIED----GTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF 313 (396)
Q Consensus 241 l~~q~~~~~iplkIl~Iet----G~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~ 313 (396)
++.... +-.++|||+.+ ++.+..+. +... +.|.+..+.+|++...|+.|++||+.+++.......+.
T Consensus 220 l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 220 MATSSV--DATVKLWDLRNIKDKNSYIAEMP----HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp EEEEET--TSEEEEEEGGGCCSTTCEEEEEE----CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred EEEEeC--CCEEEEEeCCCCCcccceEEEec----CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 555555 45789999999 66666554 3344 78887788999999999999999999977654433221
Q ss_pred -------CCCceEEEeecCeEE-EEE---------EcCeEEEEeccc-ceeeeecccc--ccC---CCCCCCcEEEccC
Q 016020 314 -------MTPSAFIFLYENQLF-LTF---------RNRTVAVWNFRG-ELVTSFEDHL--LWH---PDCNTNNIYITSD 369 (396)
Q Consensus 314 -------~~PsAFiFly~~qLF-LTf---------s~gti~iWd~~g-eL~t~fedh~--l~~---~~c~~n~~~it~~ 369 (396)
.... ..|.+++.+. +++ .+|+|.+||+.. +++..+..|. ... ...+++++++|+.
T Consensus 294 ~~~~~~~~~~~-~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 294 HRQFQHLTPIK-ATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp BCCCTTSCCCC-CEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred ccccccccceE-EeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 2222 2444444433 333 359999999864 7888887643 111 1245555555554
No 65
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.45 E-value=1.9e-11 Score=106.73 Aligned_cols=229 Identities=12% Similarity=0.140 Sum_probs=153.5
Q ss_pred hccccceeeeccccceEEEecC-CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeee--------------hh---
Q 016020 105 AHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTK--------------IE--- 166 (396)
Q Consensus 105 ~~sG~c~af~~~t~~~ic~lN~-s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~--------------~~--- 166 (396)
+--|....||..||+.+..+.. .+...|.+|-++...+.|++.| .|. .++.-.+. +.
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs---~Dg--~v~iw~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---SSA--EVQLWDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---TTS--EEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE---CCC--cEEEeecCCceeEEEecCccceEEEee
Confidence 4467789999999998887764 4667899999998888777644 121 11111110 00
Q ss_pred ----hhhhCCC---------CCCCcceeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCceE----EEEe--
Q 016020 167 ----YIRRGKP---------DSGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM----LYSI-- 224 (396)
Q Consensus 167 ----~i~~gk~---------~~~~~LF~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~----lysI-- 224 (396)
.+--|-. ..+...- .....|.+ .+.|.. +|+.++....|+.++|||+++.+. +...
T Consensus 117 ~~~~~l~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 194 (318)
T 4ggc_A 117 WNSYILSSGSRSGHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 194 (318)
T ss_dssp EETTEEEEEETTSEEEEEETTSSSCEE-EEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC
T ss_pred cCCCEEEEEecCCceEeeecCCCceeE-EEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecc
Confidence 0000000 0000000 01111222 334444 788999999999999999988652 2222
Q ss_pred ccCceEEEEEcCC-eEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee--cCCeeeEEEcc
Q 016020 225 SDKHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVR 301 (396)
Q Consensus 225 s~~~VqEIkiSpg-~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ--ed~~L~I~Dv~ 301 (396)
....|..+.++|. -.++..........++||+.++++......+. ..-..+.|.. .+.++++.. .|+.|+|||+.
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~-~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSP-HYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS-SCEEEEEEET-TTTEEEEEECTTTCCEEEEETT
T ss_pred cCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce-eeeeeeeecc-cccceEEEEEcCCCEEEEEECC
Confidence 2367888888853 23333344445678899999999988776521 2222367777 566666654 89999999999
Q ss_pred cceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEecc
Q 016020 302 NAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFR 342 (396)
Q Consensus 302 ~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~ 342 (396)
+++++.+..+|.....+.-|.+++++++|-+. |+|+|||+.
T Consensus 273 ~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 273 TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 99999999999999999999999999999987 999999974
No 66
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.45 E-value=4.3e-12 Score=119.50 Aligned_cols=169 Identities=12% Similarity=0.242 Sum_probs=134.9
Q ss_pred CCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCC
Q 016020 197 NGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNK 274 (396)
Q Consensus 197 NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk 274 (396)
+|..++..+.|+.++|||+++.+.+.++.+ ..|..+.++++.++ .... ...+++|++.+++.......+..+..
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~--s~s~--dg~i~vwd~~~~~~~~~~~~~~~~~~ 257 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMV--TCSK--DRSIAVWDMASPTDITLRRVLVGHRA 257 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEE--EEET--TSCEEEEECSSSSCCEEEEEECCCSS
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEE--EeeC--CCcEEEEeCCCCCCceeeeEecCCCC
Confidence 578999999999999999999999998876 88999999988443 3333 46789999999998865555557777
Q ss_pred ccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccc
Q 016020 275 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDH 352 (396)
Q Consensus 275 ~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh 352 (396)
.+.-+...+++|++...|+.|++||+.+++++....++...+.+..| +++++++-+. |+|.+||++. +.+..++.|
T Consensus 258 ~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h 335 (435)
T 1p22_A 258 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 335 (435)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred cEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCC
Confidence 75555558899999999999999999999999998899888888777 4566666664 9999999984 788889888
Q ss_pred cccCCC-CCCCcEEEccCCc
Q 016020 353 LLWHPD-CNTNNIYITSDQD 371 (396)
Q Consensus 353 ~l~~~~-c~~n~~~it~~qd 371 (396)
...... +.+++.++|+..|
T Consensus 336 ~~~v~~~~~~~~~l~sg~~d 355 (435)
T 1p22_A 336 EELVRCIRFDNKRIVSGAYD 355 (435)
T ss_dssp SSCEEEEECCSSEEEEEETT
T ss_pred cCcEEEEEecCCEEEEEeCC
Confidence 654322 3366666666555
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.45 E-value=5.7e-12 Score=115.01 Aligned_cols=181 Identities=14% Similarity=0.119 Sum_probs=136.1
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec----cCceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS----DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs----~~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
+.|++.+.+.++..+.|+.++|||+.+.+....+. ...|..++++| +-.+++.... ...++||++++ +.+..
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~-~~~~~ 155 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI--RGATTLRDFSG-SVIQV 155 (383)
T ss_dssp EEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET--TTEEEEEETTS-CEEEE
T ss_pred EEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC--CCEEEEEECCC-CceEE
Confidence 57787333899999999999999999888777764 38899999999 5555566655 46789999995 55555
Q ss_pred EEeecccCC---ccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEEEc-CeEEEEe
Q 016020 266 FYHLLHRNK---KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFRN-RTVAVWN 340 (396)
Q Consensus 266 ~~~~L~~sk---~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs~-gti~iWd 340 (396)
+...-.+.. .+.|.+ .+.+|++..+|+.+++||+ +++.+.....|...+.+..|.++++ ++++-+. |+|.+||
T Consensus 156 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp EECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEe
Confidence 542212222 277777 7899999999999999999 6777778888999999999999998 8888776 8999999
Q ss_pred ccc-----ceeeeeccccccC---CCCC-CCcEEEccCCcEEEEec
Q 016020 341 FRG-----ELVTSFEDHLLWH---PDCN-TNNIYITSDQDLIISYC 377 (396)
Q Consensus 341 ~~g-----eL~t~fedh~l~~---~~c~-~n~~~it~~qd~ii~~~ 377 (396)
++. +++..+ .|.-+. ..++ +++.+++...|=-|.-.
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iw 278 (383)
T 3ei3_B 234 LRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVY 278 (383)
T ss_dssp GGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEE
T ss_pred CCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEE
Confidence 984 466655 343322 1256 77777777766444433
No 68
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.45 E-value=4.3e-12 Score=113.96 Aligned_cols=267 Identities=13% Similarity=0.107 Sum_probs=154.6
Q ss_pred ccceEEEeecc---chhhhhhccccceeeeccccceEEEec------------CCCCceEEEEeeecCCCeEEEEEeEec
Q 016020 88 RTKVIEIVAAR---DIVFALAHSGVCAAFSRETNRRICFLN------------VSPDEVIRSLFYNKNNDSLITVSVYAS 152 (396)
Q Consensus 88 RS~V~EIv~a~---dii~~L~~sG~c~af~~~t~~~ic~lN------------~s~~evIrsifyN~~n~slI~vSv~~s 152 (396)
+.+|..+.... .+++.-...|....||..+++....+. ..+..-|.++-++..+..++.++ ..
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~--~~ 120 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS--SF 120 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE--ET
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE--eC
Confidence 45566665543 677777788999999999887766554 24677788888887455444421 22
Q ss_pred CCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCC--CCcEEEeecCCCeEEEEeccCceEEEEecc--Cc
Q 016020 153 DNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDV--NGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KH 228 (396)
Q Consensus 153 d~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~--NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~ 228 (396)
|. .++.-.+ ..| .++..-..-....-+.|.+. ++..++....|+.+++||+++.+.+..+.. ..
T Consensus 121 d~--~i~iwd~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 188 (408)
T 4a11_B 121 DK--TLKVWDT-----NTL-----QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQE 188 (408)
T ss_dssp TS--EEEEEET-----TTT-----EEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSC
T ss_pred CC--eEEEeeC-----CCC-----ccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCc
Confidence 22 2333322 121 11111111111223444443 566899999999999999999998888875 78
Q ss_pred eEEEEEcCCeE-EEEEecCCCeeeeEEEEeecCc-EEEEEEe------------ecccCCc---cchhhhhcceeeEeec
Q 016020 229 VQEIKISPGIM-LLIFNRSSSHVPLKILSIEDGT-VLKVFYH------------LLHRNKK---VDFIEQFNEKLLVKQE 291 (396)
Q Consensus 229 VqEIkiSpg~~-Ll~~q~~~~~iplkIl~IetG~-~l~s~~~------------~L~~sk~---i~FiE~~~ekLLIKQe 291 (396)
|..+.++|+-- +++.... ...++|||+.+++ .+..+.. ...+... +.|.+ .+++|++...
T Consensus 189 v~~~~~~~~~~~ll~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 265 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASA--DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGT 265 (408)
T ss_dssp EEEEEECSSCTTEEEEEET--TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEET
T ss_pred EEEEEECCCCCcEEEEEcC--CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecC
Confidence 99999998753 4444444 4568999998887 3333310 0122233 67777 7888999988
Q ss_pred CCeeeEEEcccceEEEecccc--c--CCCceEE--EeecCeEEEEEEcCeEEEEeccc-ceeeeeccccccCCC---CCC
Q 016020 292 NENLQILDVRNAELMEVSRTE--F--MTPSAFI--FLYENQLFLTFRNRTVAVWNFRG-ELVTSFEDHLLWHPD---CNT 361 (396)
Q Consensus 292 d~~L~I~Dv~~~ki~~v~~t~--~--~~PsAFi--Fly~~qLFLTfs~gti~iWd~~g-eL~t~fedh~l~~~~---c~~ 361 (396)
|+.|++||+.+++...+...+ . ..+..+. ....+.+.++-.++.|.+||+.. +++..+..|.-.... .++
T Consensus 266 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~ 345 (408)
T 4a11_B 266 DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN 345 (408)
T ss_dssp TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETT
T ss_pred CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCC
Confidence 999999998876654322111 0 0011111 11233334444445555555544 555555555332211 344
Q ss_pred CcEEEccCCc
Q 016020 362 NNIYITSDQD 371 (396)
Q Consensus 362 n~~~it~~qd 371 (396)
+++++|...|
T Consensus 346 ~~~l~s~~~d 355 (408)
T 4a11_B 346 FQELYSGSRD 355 (408)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 5555555444
No 69
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.44 E-value=5.8e-12 Score=113.32 Aligned_cols=174 Identities=17% Similarity=0.292 Sum_probs=129.4
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccC--ceEEEEecc--CceEEEEEcC---CeEEEEEecCCCeeeeEEEEeecCc--
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKN--YTMLYSISD--KHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGT-- 261 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlkn--Ys~lysIs~--~~VqEIkiSp---g~~Ll~~q~~~~~iplkIl~IetG~-- 261 (396)
+.|++ +|+.|+..+.|+++||||+.+ .+.+..+.+ ..|..+.+++ |-+| +.... +..++||++++|+
T Consensus 15 ~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l-~s~s~--D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 15 AVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTIL-ASCSY--DGKVMIWKEENGRWS 90 (297)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEE-EEEET--TTEEEEEEBSSSCBC
T ss_pred EEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEE-EEEcC--CCEEEEEEcCCCceE
Confidence 46887 799999999999999999975 467778775 7899999985 5554 44444 5778999999985
Q ss_pred EEEEEEeecccCCc---cchhhh-hcceeeEeecCCeeeEEEcccceE--EEecccccCCCceEEEeec-----------
Q 016020 262 VLKVFYHLLHRNKK---VDFIEQ-FNEKLLVKQENENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYE----------- 324 (396)
Q Consensus 262 ~l~s~~~~L~~sk~---i~FiE~-~~ekLLIKQed~~L~I~Dv~~~ki--~~v~~t~~~~PsAFiFly~----------- 324 (396)
.+..+. .|+.. +.|.+. .+.+|++...|+.+++||+.+++. ..+..+|.....+.-|.++
T Consensus 91 ~~~~~~---~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~ 167 (297)
T 2pm7_B 91 QIAVHA---VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (297)
T ss_dssp CCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----------
T ss_pred EEEEee---cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCC
Confidence 333333 34444 777774 378999999999999999998632 3455677777888888876
Q ss_pred --CeEEEEEEc-CeEEEEeccc-c----eeeeeccccccCCC---CCC---CcEEEccCCc
Q 016020 325 --NQLFLTFRN-RTVAVWNFRG-E----LVTSFEDHLLWHPD---CNT---NNIYITSDQD 371 (396)
Q Consensus 325 --~qLFLTfs~-gti~iWd~~g-e----L~t~fedh~l~~~~---c~~---n~~~it~~qd 371 (396)
+++++|-+. |+|++||++. + +...++.|--++.. .|+ +++++|...|
T Consensus 168 ~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp --CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred CCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 467887775 8999999986 3 66788888654322 344 4777777666
No 70
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.44 E-value=1.8e-11 Score=107.96 Aligned_cols=246 Identities=8% Similarity=0.045 Sum_probs=166.0
Q ss_pred ccceEEEeecc-----chhhhhhccccceeeeccc-cceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeE
Q 016020 88 RTKVIEIVAAR-----DIVFALAHSGVCAAFSRET-NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCR 161 (396)
Q Consensus 88 RS~V~EIv~a~-----dii~~L~~sG~c~af~~~t-~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr 161 (396)
...|.-+-... .++++-...|....||..+ ++.+...-..+..-|.++-++.+.+.|++.| .|. .++.-
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~dg--~v~iw 113 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS---CDK--TAKMW 113 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE---TTS--EEEEE
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc---CCC--cEEEE
Confidence 45666666664 4677778889999999988 6666344445667788899998666666543 232 23332
Q ss_pred eeehhhhhhCCCCCCCcceeecccCCCC---eEEee-CCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcC
Q 016020 162 STKIEYIRRGKPDSGFALFESESLKWPG---FVEFD-DVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISP 236 (396)
Q Consensus 162 ~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFD-d~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSp 236 (396)
. +..++ .+.. ..|++ -+.|. ..+|+.++..+.|+.++|||+++.+.+..+.. ..+..+.+.+
T Consensus 114 d-----~~~~~-----~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 114 D-----LSSNQ-----AIQI---AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp E-----TTTTE-----EEEE---EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred E-----cCCCC-----ceee---ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence 2 22222 1211 12333 45662 33889899999999999999999998888876 6788888888
Q ss_pred CeEEEEEecCCCeeeeEEEEeecCcEEEEEE-eecccCCc-cchhhh---hcceeeEeecCCeeeEEEcccc---eEEEe
Q 016020 237 GIMLLIFNRSSSHVPLKILSIEDGTVLKVFY-HLLHRNKK-VDFIEQ---FNEKLLVKQENENLQILDVRNA---ELMEV 308 (396)
Q Consensus 237 g~~Ll~~q~~~~~iplkIl~IetG~~l~s~~-~~L~~sk~-i~FiE~---~~ekLLIKQed~~L~I~Dv~~~---ki~~v 308 (396)
...++... .-.+.+|++.++....... ....+... +.+... ....+++...|+.++|||+.+. +....
T Consensus 181 ~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 181 PMAVVATA----ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp TEEEEEEG----GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred CeeEEEeC----CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 76554433 3468899998876654322 11111111 222210 1223999999999999999987 44555
Q ss_pred cccccC------------CCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeecccccc
Q 016020 309 SRTEFM------------TPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLW 355 (396)
Q Consensus 309 ~~t~~~------------~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~ 355 (396)
...+.. .+.+..|.++++++++-+. |+|.+||++. +++..+..|.-+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 317 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP 317 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC
Confidence 555554 6889999999999998876 9999999996 788888877543
No 71
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.44 E-value=3.7e-13 Score=121.84 Aligned_cols=182 Identities=11% Similarity=-0.011 Sum_probs=132.5
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCce---EEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcE--
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV-- 262 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs---~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~-- 262 (396)
-+.|.+ +|+.++..+.|+.++|||+.+.+ .+..+.. ..|..++++|+-.+++.... .-.++||++++++.
T Consensus 60 ~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~ 136 (377)
T 3dwl_C 60 CVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG--ARVISVCYFEQENDWW 136 (377)
T ss_dssp EEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES--SSCEEECCC-----CC
T ss_pred EEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec--CCeEEEEEECCcccce
Confidence 356777 68888888999999999999976 6666654 88999999987655555554 45789999999985
Q ss_pred -EEEEEeecc-cCCc---cchhhhhcceeeEeecCCeeeEEEcc------------------cceEEEecccccCCCceE
Q 016020 263 -LKVFYHLLH-RNKK---VDFIEQFNEKLLVKQENENLQILDVR------------------NAELMEVSRTEFMTPSAF 319 (396)
Q Consensus 263 -l~s~~~~L~-~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~------------------~~ki~~v~~t~~~~PsAF 319 (396)
+..+. . |... +.|.+ .+.+|++...|+.+++||+. +++++... .|...+.+.
T Consensus 137 ~~~~~~---~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~ 211 (377)
T 3dwl_C 137 VSKHLK---RPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAV 211 (377)
T ss_dssp CCEEEC---SSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEE
T ss_pred eeeEee---cccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEE
Confidence 44444 3 4554 77887 78899999999999999995 56677766 888889999
Q ss_pred EEeecCeEEEEEEc-CeEEEEeccc-ce----eeeeccccccCC---CCCCCcEEEccCCcEEEEeccC
Q 016020 320 IFLYENQLFLTFRN-RTVAVWNFRG-EL----VTSFEDHLLWHP---DCNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 320 iFly~~qLFLTfs~-gti~iWd~~g-eL----~t~fedh~l~~~---~c~~n~~~it~~qd~ii~~~~~ 379 (396)
.|.++++++++-+. |+|.+||++. +. +..+..|..+.. ..+++++.++...|-++-|-..
T Consensus 212 ~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 212 GFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 99999999888876 8999999987 45 677887765422 2667888888888877766544
No 72
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.44 E-value=9.7e-12 Score=114.46 Aligned_cols=147 Identities=13% Similarity=0.169 Sum_probs=121.9
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCc--eEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNY--TMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknY--s~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~ 266 (396)
+.|.+ +|+.|+..+.|+.+++||+.+. +++..+.+ ..|..+.++|+-.+|+.... +..++||++.+++.....
T Consensus 67 ~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~--D~~v~iwd~~~~~~~~~~ 143 (345)
T 3fm0_A 67 VAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR--DKSVWVWEVDEEDEYECV 143 (345)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEEECTTSCEEEE
T ss_pred EEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC--CCeEEEEECCCCCCeEEE
Confidence 67887 7999999999999999999865 46777775 78999999987776677665 567999999998765544
Q ss_pred EeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceE--EEecccccCCCceEEEeecCeEEEEEEc-CeEEEEe
Q 016020 267 YHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAEL--MEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWN 340 (396)
Q Consensus 267 ~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki--~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd 340 (396)
..+-.|+.. +.|.+ .+++|++...|+.+++||+.+++. ..+..+|...+.+.-|.+++++++|-+. |+|.+||
T Consensus 144 ~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 144 SVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp EEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 433355555 67777 788999999999999999999864 4577889999999999999999999887 9999999
Q ss_pred c
Q 016020 341 F 341 (396)
Q Consensus 341 ~ 341 (396)
.
T Consensus 223 ~ 223 (345)
T 3fm0_A 223 Q 223 (345)
T ss_dssp E
T ss_pred c
Confidence 6
No 73
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.42 E-value=7.4e-12 Score=125.81 Aligned_cols=181 Identities=13% Similarity=0.191 Sum_probs=142.3
Q ss_pred CCCCeE---EeeCCCCcEEEeecCCCeEEEEeccCce-----EEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEE
Q 016020 186 KWPGFV---EFDDVNGKVLTYSAQDSIYKVFDLKNYT-----MLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKIL 255 (396)
Q Consensus 186 ~~PgfV---EFDd~NgkIlt~~a~d~~YrVwdlknYs-----~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl 255 (396)
.|.+.| .|.+.++.+|+..+.|+.+||||+.+.. ....+.+ ..|..+.+||+-.+|+.... +..++||
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~--Dg~v~vw 457 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW--DGELRLW 457 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET--TSEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC--CCcEEEE
Confidence 577754 5777788999999999999999997642 3344444 77999999987777777665 5789999
Q ss_pred EeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEec---ccccCCCceEEEeecC--eE
Q 016020 256 SIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS---RTEFMTPSAFIFLYEN--QL 327 (396)
Q Consensus 256 ~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~---~t~~~~PsAFiFly~~--qL 327 (396)
|+.+|+.+..+. .|+.. +.|.+ .+.+|+....|+.++|||+.......+. ..|.....+..|.+++ .+
T Consensus 458 d~~~~~~~~~~~---~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 458 DLAAGVSTRRFV---GHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp ETTTTEEEEEEE---CCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred ECCCCcceeEEe---CCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 999999988876 66666 67877 8999999999999999999877665554 4577778899999976 56
Q ss_pred EEEEEc-CeEEEEeccc-ceeeeeccccccCCC---CCCCcEEEccCCcE
Q 016020 328 FLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHPD---CNTNNIYITSDQDL 372 (396)
Q Consensus 328 FLTfs~-gti~iWd~~g-eL~t~fedh~l~~~~---c~~n~~~it~~qd~ 372 (396)
+++-+. |+|++||++. +++..+..|--+... ++++++++|...|=
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg 583 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG 583 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 777775 9999999988 688889888654322 56777777766653
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.42 E-value=1e-11 Score=123.99 Aligned_cols=183 Identities=13% Similarity=0.117 Sum_probs=145.0
Q ss_pred CeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEE
Q 016020 189 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (396)
Q Consensus 189 gfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~ 266 (396)
--+.|++ +|+.++....|+.++|||+.+.+.+.++.. ..|..+.|||+--.++.... ...++||++++|+.+..+
T Consensus 17 ~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 17 KGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp EEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEE
T ss_pred EEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEE
Confidence 4567887 789999999999999999999999888875 78999999987766666655 567899999999999888
Q ss_pred EeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccc-eEEEecccccCCCceEEEee-cCeEEEEEEc-CeEEEEe
Q 016020 267 YHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNA-ELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-RTVAVWN 340 (396)
Q Consensus 267 ~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~-ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~-gti~iWd 340 (396)
. .|... +.|.+ .+.+|++...|+.+++||+.++ ++..+...+...+.+..|.+ +++++++.+. |+|.+||
T Consensus 94 ~---~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd 169 (814)
T 3mkq_A 94 E---AHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (814)
T ss_dssp E---CCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred e---cCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 7 45554 77877 7889999999999999999997 77888888999999999999 7878887776 9999999
Q ss_pred ccc-ceeeeecccc----ccCCCCC--CCcEEEccCCcEEEEecc
Q 016020 341 FRG-ELVTSFEDHL----LWHPDCN--TNNIYITSDQDLIISYCK 378 (396)
Q Consensus 341 ~~g-eL~t~fedh~----l~~~~c~--~n~~~it~~qd~ii~~~~ 378 (396)
.++ +....+..|. .+...++ +++.+++...|=-|.-..
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d 214 (814)
T 3mkq_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (814)
T ss_dssp TTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEE
T ss_pred CCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 976 5555554432 1122244 777777776664444333
No 75
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.42 E-value=6e-12 Score=113.22 Aligned_cols=241 Identities=15% Similarity=0.155 Sum_probs=152.3
Q ss_pred CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCe---EEeeCC-CCcEEE
Q 016020 127 SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGF---VEFDDV-NGKVLT 202 (396)
Q Consensus 127 s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgf---VEFDd~-NgkIlt 202 (396)
.+...|+++-++....-|++.| .|. .++.-.+. .+ .+.++- .--.|.+- +.|.+. +|+.|+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s---~D~--~v~iw~~~-----~~---~~~~~~--~l~gH~~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCS---SDK--TIKIFEVE-----GE---THKLID--TLTGHEGPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEE---TTS--CEEEEEBC-----SS---CBCCCE--EECCCSSCEEEEEECCGGGCSEEE
T ss_pred CCcCceEEEEECCCCCEEEEEe---CCC--EEEEEecC-----CC---CcEEEE--EEccccCCeEEEEecCCCcCCEEE
Confidence 3556788888887666665533 222 23332221 00 011111 11134443 467543 589999
Q ss_pred eecCCCeEEEEeccCce--EEEEecc--CceEEEEEcC---CeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc
Q 016020 203 YSAQDSIYKVFDLKNYT--MLYSISD--KHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK 275 (396)
Q Consensus 203 ~~a~d~~YrVwdlknYs--~lysIs~--~~VqEIkiSp---g~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~ 275 (396)
..+.|+++||||+++.+ .+..+.. ..|..+.++| |.+|+... . +..++||++.+++...... +..|...
T Consensus 72 s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s-~--d~~v~~wd~~~~~~~~~~~-~~~h~~~ 147 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS-S--DGKVSVVEFKENGTTSPII-IDAHAIG 147 (297)
T ss_dssp EEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-T--TSEEEEEEBCSSSCBCCEE-EECCSSC
T ss_pred EEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE-C--CCcEEEEEecCCCceeeee-eecccCc
Confidence 99999999999999863 5666653 7899999998 45554433 3 4678999999875321111 1144443
Q ss_pred ---cchhhh------------hcceeeEeecCCeeeEEEcccce----EEEecccccCCCceEEEeecC---eEEEEEEc
Q 016020 276 ---VDFIEQ------------FNEKLLVKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYEN---QLFLTFRN 333 (396)
Q Consensus 276 ---i~FiE~------------~~ekLLIKQed~~L~I~Dv~~~k----i~~v~~t~~~~PsAFiFly~~---qLFLTfs~ 333 (396)
+.|.+. .+.+|+....|+.++|||+.+++ +.....+|..++.+.-|.+++ ++++|-+.
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 455542 25689999999999999999876 667788999999999999984 88888886
Q ss_pred -CeEEEEecccc----eeeee--cccccc---CCCCCCCcEEEccCCcEEEEeccCCCCCccc
Q 016020 334 -RTVAVWNFRGE----LVTSF--EDHLLW---HPDCNTNNIYITSDQDLIISYCKAEPEDQWM 386 (396)
Q Consensus 334 -gti~iWd~~ge----L~t~f--edh~l~---~~~c~~n~~~it~~qd~ii~~~~~~~~~~~~ 386 (396)
|+|.|||.+.. ....+ ..|.-+ ....|++++++|+..|=.|--.+...+..|.
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~ 290 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWE 290 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEE
Confidence 99999999862 12223 233211 1225677777776666444434443334443
No 76
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.41 E-value=1.5e-10 Score=108.37 Aligned_cols=228 Identities=12% Similarity=0.137 Sum_probs=153.6
Q ss_pred hhhhhhccccceeeeccccceEE-Ee-------cCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhC
Q 016020 100 IVFALAHSGVCAAFSRETNRRIC-FL-------NVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRG 171 (396)
Q Consensus 100 ii~~L~~sG~c~af~~~t~~~ic-~l-------N~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~g 171 (396)
.|+.....+.++.|+..+++-.. ++ -..++.-+|++=++.+...|+++| .+++ .. .|.-+. +
T Consensus 96 ~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as--~~~d-~~--i~iwd~---~-- 165 (365)
T 4h5i_A 96 KITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIAS--SKVP-AI--MRIIDP---S-- 165 (365)
T ss_dssp HHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEE--SCSS-CE--EEEEET---T--
T ss_pred EEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEE--CCCC-CE--EEEeEC---C--
Confidence 34444456667777755443222 11 123445688888888777777744 3333 22 222222 1
Q ss_pred CCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc----CceEEEEEcCCeEEEEEecCC
Q 016020 172 KPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD----KHVQEIKISPGIMLLIFNRSS 247 (396)
Q Consensus 172 k~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~----~~VqEIkiSpg~~Ll~~q~~~ 247 (396)
.+.++++-+--..---|.|.+ +|+.+++.+.+ ..++|+..+.+.+..... ..|..+++||+-..++.....
T Consensus 166 ---~~~~~~~~~~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d 240 (365)
T 4h5i_A 166 ---DLTEKFEIETRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLK 240 (365)
T ss_dssp ---TTEEEEEEECSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEES
T ss_pred ---CCcEEEEeCCCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecC
Confidence 223344322111123478988 89998887755 556666666666554432 568999999765555554433
Q ss_pred --CeeeeEEEEeecCcEEEE-EEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEE-ecccccCCCceEE
Q 016020 248 --SHVPLKILSIEDGTVLKV-FYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELME-VSRTEFMTPSAFI 320 (396)
Q Consensus 248 --~~iplkIl~IetG~~l~s-~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~-v~~t~~~~PsAFi 320 (396)
..+.+.+|++.++..... ...+-.+.+. ++|.+ .+.+|++...|+.++|||+.+++++. ++.+|..++.+.-
T Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~ 319 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVT 319 (365)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEE
T ss_pred CcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEE
Confidence 346788999998876443 2223355555 68888 89999999999999999999999887 5789999999999
Q ss_pred EeecCeEEEEEEc-CeEEEEeccc
Q 016020 321 FLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 321 Fly~~qLFLTfs~-gti~iWd~~g 343 (396)
|+|++++++|-|. +||+|||+..
T Consensus 320 fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 320 ISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ECTTSCEEEEEETTSEEEEEECCT
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999998 9999999965
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.41 E-value=3.6e-12 Score=115.95 Aligned_cols=181 Identities=15% Similarity=0.190 Sum_probs=132.6
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEecc--CceEEEEEcC---CeEEEEEecCCCeeeeEEEEeecCc--
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISD--KHVQEIKISP---GIMLLIFNRSSSHVPLKILSIEDGT-- 261 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs~--~~VqEIkiSp---g~~Ll~~q~~~~~iplkIl~IetG~-- 261 (396)
+.|++ +|+.|+..+.|+++||||+++.+ .+..+.+ ..|..+++++ |-+| +.... +..++||++++|+
T Consensus 19 v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l-~s~s~--D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 19 AQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNIL-ASCSY--DRKVIIWREENGTWE 94 (316)
T ss_dssp EEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCE-EEEET--TSCEEEECCSSSCCC
T ss_pred eeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEE-EEEEC--CCEEEEEECCCCcce
Confidence 57887 79999999999999999999875 5667765 7899999985 5554 44443 4679999999985
Q ss_pred EEEEEEeecccCCc---cchhhh-hcceeeEeecCCeeeEEEcccce---EEEecccccCCCceEEEeec----------
Q 016020 262 VLKVFYHLLHRNKK---VDFIEQ-FNEKLLVKQENENLQILDVRNAE---LMEVSRTEFMTPSAFIFLYE---------- 324 (396)
Q Consensus 262 ~l~s~~~~L~~sk~---i~FiE~-~~ekLLIKQed~~L~I~Dv~~~k---i~~v~~t~~~~PsAFiFly~---------- 324 (396)
.+..+. .|... +.|.+. .+.+|+....|+.+++||+.++. +..+...|.....+..|.++
T Consensus 95 ~~~~~~---~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 171 (316)
T 3bg1_A 95 KSHEHA---GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHP 171 (316)
T ss_dssp EEEEEC---CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------C
T ss_pred EEEEcc---CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccc
Confidence 333333 45444 778774 37889999999999999999863 24566677777788888776
Q ss_pred -------CeEEEEEEc-CeEEEEeccc----ceeeeeccccccCCC---CCC----CcEEEccCCcEEEEecc
Q 016020 325 -------NQLFLTFRN-RTVAVWNFRG----ELVTSFEDHLLWHPD---CNT----NNIYITSDQDLIISYCK 378 (396)
Q Consensus 325 -------~qLFLTfs~-gti~iWd~~g----eL~t~fedh~l~~~~---c~~----n~~~it~~qd~ii~~~~ 378 (396)
+++++|-+. ++|++||.++ +++..|+.|.-|+.. .|+ ++.++|..+|=-|-...
T Consensus 172 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 172 SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 367777775 8999999974 266788888544321 333 37788887775444443
No 78
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.41 E-value=7.9e-12 Score=117.09 Aligned_cols=178 Identities=13% Similarity=0.198 Sum_probs=137.6
Q ss_pred eEEeeCCCCcEE--EeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEE
Q 016020 190 FVEFDDVNGKVL--TYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (396)
Q Consensus 190 fVEFDd~NgkIl--t~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~ 266 (396)
-|-|.+ +|+.+ |.++.|+++||||+++.++++.+.. ..|.+|.|||+-.+++..... .+.+|+..+|+.+...
T Consensus 138 ~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~---~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 138 LVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS---SLEVISTVTGSCIARK 213 (365)
T ss_dssp EEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS---CEEEEETTTCCEEEEE
T ss_pred EEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce---eEEEEEeccCcceeee
Confidence 467887 77764 4556799999999999999999976 679999999887777776653 4688999999987764
Q ss_pred EeecccCCc---cchhhhhcceeeEeecCC----eeeEEEcccceEE----EecccccCCCceEEEeecCeEEEEEEc-C
Q 016020 267 YHLLHRNKK---VDFIEQFNEKLLVKQENE----NLQILDVRNAELM----EVSRTEFMTPSAFIFLYENQLFLTFRN-R 334 (396)
Q Consensus 267 ~~~L~~sk~---i~FiE~~~ekLLIKQed~----~L~I~Dv~~~ki~----~v~~t~~~~PsAFiFly~~qLFLTfs~-g 334 (396)
... .++.. +.|.+ .+.+|+....+. .+++||+...+.. ....++.....++-|.++++++.+-+. |
T Consensus 214 ~~~-~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 214 TDF-DKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp CCC-CTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred ecC-CCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 422 33332 78888 888998887766 6889999886543 345677788899999999999998887 8
Q ss_pred eEEEEeccc-ceeee-eccccccCC---CCCCCcEEEccCCcEE
Q 016020 335 TVAVWNFRG-ELVTS-FEDHLLWHP---DCNTNNIYITSDQDLI 373 (396)
Q Consensus 335 ti~iWd~~g-eL~t~-fedh~l~~~---~c~~n~~~it~~qd~i 373 (396)
+|.|||++. +++.. ++.|.-++- ..||+++.+|...|=-
T Consensus 292 ~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 292 SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 999999975 76655 577876533 3788888888766633
No 79
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.40 E-value=8.6e-11 Score=106.90 Aligned_cols=228 Identities=12% Similarity=0.140 Sum_probs=162.6
Q ss_pred hhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceee
Q 016020 103 ALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES 182 (396)
Q Consensus 103 ~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~ 182 (396)
+-...|...+||..+++.+..+.... -+.++-++..+..|++. .+++ ..++. .+ +.. +..+-..
T Consensus 49 ~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~---~~~~-~~v~v--~d---~~~-----~~~~~~~ 112 (391)
T 1l0q_A 49 ANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVT---NMAS-STLSV--ID---TTS-----NTVAGTV 112 (391)
T ss_dssp EEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEE---ETTT-TEEEE--EE---TTT-----TEEEEEE
T ss_pred ECCCCCeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEE---ECCC-CEEEE--EE---CCC-----CeEEEEE
Confidence 33477899999999999998887655 77889888777666552 2222 22332 22 222 2222221
Q ss_pred cccCCCCeEEeeCCCCc-EEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCe-EEEEEecCCCeeeeEEEEeec
Q 016020 183 ESLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIED 259 (396)
Q Consensus 183 ~~l~~PgfVEFDd~Ngk-Ilt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~Iet 259 (396)
..-..|.-+.|++ +|+ +++....++.+++||+.+.+.+..+.. ..+..+.++|+- .|++.... .-.+.+||+.+
T Consensus 113 ~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~--~~~v~~~d~~~ 189 (391)
T 1l0q_A 113 KTGKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD--SMSISVIDTVT 189 (391)
T ss_dssp ECSSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETT--TTEEEEEETTT
T ss_pred eCCCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCC--CCEEEEEECCC
Confidence 2223466788988 555 546777899999999999999888875 788999999765 44455544 34589999999
Q ss_pred CcEEEEEEeecccCCccchhhhhcceeeEee---cCCeeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEEE-cC
Q 016020 260 GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ---ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR-NR 334 (396)
Q Consensus 260 G~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ---ed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs-~g 334 (396)
|+.+..+.+. ..-..+.|.+ .+++|++.. .+..|.+||+.+++.+...+.+. .|.+..|.++++ +|++-+ ++
T Consensus 190 ~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~ 266 (391)
T 1l0q_A 190 NSVIDTVKVE-AAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXN 266 (391)
T ss_dssp TEEEEEEECS-SEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTT
T ss_pred CeEEEEEecC-CCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCC
Confidence 9988777621 1112377777 788999988 68999999999999888766654 578899999886 556755 49
Q ss_pred eEEEEeccc-ceeeeeccc
Q 016020 335 TVAVWNFRG-ELVTSFEDH 352 (396)
Q Consensus 335 ti~iWd~~g-eL~t~fedh 352 (396)
+|.+||.+. +++..++-|
T Consensus 267 ~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 267 TVSVIDTATNTITATMAVG 285 (391)
T ss_dssp EEEEEETTTTEEEEEEECS
T ss_pred EEEEEECCCCcEEEEEECC
Confidence 999999985 677666655
No 80
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.1e-11 Score=111.62 Aligned_cols=172 Identities=17% Similarity=0.202 Sum_probs=126.5
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccC--ceEEEEec----cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecC----
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKN--YTMLYSIS----DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDG---- 260 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlkn--Ys~lysIs----~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG---- 260 (396)
+.|++ . .++..+.|+.+|+||+++ ++.+..+. ...|..++++|+--+|+.... +..++||+++++
T Consensus 20 ~~~s~--~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~--D~~v~iw~~~~~~~~~ 94 (330)
T 2hes_X 20 FDFSQ--G-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF--DSTVSIWAKEESADRT 94 (330)
T ss_dssp EEEET--T-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET--TSCEEEEEC-------
T ss_pred eccCC--C-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC--CCcEEEEEcccCcCcc
Confidence 56665 2 888889999999999987 46666662 267999999987776676665 567899999754
Q ss_pred ---cEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEccc----ceEEEecccccCCCceEEEeecCeEEEE
Q 016020 261 ---TVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRN----AELMEVSRTEFMTPSAFIFLYENQLFLT 330 (396)
Q Consensus 261 ---~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~----~ki~~v~~t~~~~PsAFiFly~~qLFLT 330 (396)
+.+..+. .|... +.|.+ .+++|+....|+.++|||+.+ .+++.+...|...+.+..|.+++++++|
T Consensus 95 ~~~~~~~~~~---~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 95 FEMDLLAIIE---GHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLAS 170 (330)
T ss_dssp CCCEEEEEEC-------CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred ccceeEEEEc---CCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEE
Confidence 3333333 56555 78887 799999999999999999953 3677788899999999999999999999
Q ss_pred EEc-CeEEEEeccc---ceeeeeccccccCC---CCCC--CcEEEccCCc
Q 016020 331 FRN-RTVAVWNFRG---ELVTSFEDHLLWHP---DCNT--NNIYITSDQD 371 (396)
Q Consensus 331 fs~-gti~iWd~~g---eL~t~fedh~l~~~---~c~~--n~~~it~~qd 371 (396)
-+. |+|++||... +.+..+..|.-+.. ..++ ....+|+..|
T Consensus 171 ~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 171 SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred EcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 986 9999999864 46778888864432 1344 3455555554
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.39 E-value=4.2e-10 Score=99.11 Aligned_cols=231 Identities=14% Similarity=0.185 Sum_probs=159.5
Q ss_pred ccceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 88 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
...|.-+... ..+++.-...|....++..++............+ ..+.+...+..|++.| .|. .++..
T Consensus 86 ~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~s~s---~d~--~~~~~---- 155 (340)
T 4aow_A 86 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV-LSVAFSSDNRQIVSGS---RDK--TIKLW---- 155 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEECTTSSCEEEEE---TTS--CEEEE----
T ss_pred CCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCce-eEEEEeecCccceeec---CCC--eEEEE----
Confidence 3456665554 3456666777888889888887777766655544 4566666777666543 222 11111
Q ss_pred hhhhhCCCCCCCcceeecccCCCC---eEEeeCC-CCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeE
Q 016020 166 EYIRRGKPDSGFALFESESLKWPG---FVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIM 239 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~-NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~ 239 (396)
++.. .. ........|.+ .+.|... .+.+++..+.|+.+++||+++.+.+..+.+ ..|..|.++|+-.
T Consensus 156 -d~~~-----~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~ 228 (340)
T 4aow_A 156 -NTLG-----VC-KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 228 (340)
T ss_dssp -CTTS-----CE-EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred -EeCC-----Cc-eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC
Confidence 1110 10 11111112222 3455542 456777788999999999999999999876 7899999998766
Q ss_pred EEEEecCCCeeeeEEEEeecCcEEEEEEeecccC--CccchhhhhcceeeEeecCCeeeEEEcccceEEEecc-------
Q 016020 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN--KKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR------- 310 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~s--k~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~------- 310 (396)
+++.... +..++|||+.+++.+..+.. +. ..+.|.+ +++++....|+.|+|||+.++++.....
T Consensus 229 ~l~s~s~--Dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 301 (340)
T 4aow_A 229 LCASGGK--DGQAMLWDLNEGKHLYTLDG---GDIINALCFSP--NRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTS 301 (340)
T ss_dssp EEEEEET--TCEEEEEETTTTEEEEEEEC---SSCEEEEEECS--SSSEEEEEETTEEEEEETTTTEEEEEECCC-----
T ss_pred EEEEEeC--CCeEEEEEeccCceeeeecC---CceEEeeecCC--CCceeeccCCCEEEEEECCCCeEEEeccccceeee
Confidence 6666655 56789999999999988772 22 1255654 5688888999999999999988776443
Q ss_pred --cccCCCceEEEeecCeEEEEEEc-CeEEEEecc
Q 016020 311 --TEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFR 342 (396)
Q Consensus 311 --t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~ 342 (396)
.+.....+.-|.+++++++|-+. |+|.|||++
T Consensus 302 ~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 302 SKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 45566778889999999999877 999999976
No 82
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.39 E-value=5.4e-11 Score=106.82 Aligned_cols=219 Identities=13% Similarity=0.151 Sum_probs=152.1
Q ss_pred hccccceeeeccccceEEEecCCCCceEEEEeeec-CCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceee-
Q 016020 105 AHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNK-NNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES- 182 (396)
Q Consensus 105 ~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~-~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~- 182 (396)
...+.-+.|+..+++..-.+.. +..-|.++-++. +.+.|++.+ .|. .++.-.+ ..++.. ..+..
T Consensus 20 ~~~~~~~v~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~~l~~~~---~dg--~i~iw~~-----~~~~~~---~~~~~~ 85 (408)
T 4a11_B 20 RAESTRRVLGLELNKDRDVERI-HGGGINTLDIEPVEGRYMLSGG---SDG--VIVLYDL-----ENSSRQ---SYYTCK 85 (408)
T ss_dssp HHHHHHHHHTEEECTTEEECCC-CSSCEEEEEECTTTCCEEEEEE---TTS--CEEEEEC-----CCCSSS---SCEEEC
T ss_pred eccCcceeeccccCcceeeeec-cCCcEEEEEEecCCCCEEEEEc---CCC--eEEEEEC-----CCCccc---ceEecc
Confidence 3344456677777777766665 667788899988 555555533 232 2332222 111111 11110
Q ss_pred -----------cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCe---EEEEEecCC
Q 016020 183 -----------ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGI---MLLIFNRSS 247 (396)
Q Consensus 183 -----------~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~---~Ll~~q~~~ 247 (396)
..-...--+.|.+.++..++..+.|+.+++||+.+.+.+..+.. ..+..+.++|.. .+++....
T Consensus 86 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 164 (408)
T 4a11_B 86 AVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR- 164 (408)
T ss_dssp EEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES-
T ss_pred ccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC-
Confidence 01112234678887888888899999999999999998888875 788999999743 24444444
Q ss_pred CeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcce-eeEeecCCeeeEEEcccce-EEEec-------------
Q 016020 248 SHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEK-LLVKQENENLQILDVRNAE-LMEVS------------- 309 (396)
Q Consensus 248 ~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ek-LLIKQed~~L~I~Dv~~~k-i~~v~------------- 309 (396)
...+.+|++.+|+.+..+. .+... +.|.+ .+.+ |++...|+.|++||+++++ .....
T Consensus 165 -~~~v~~~d~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 239 (408)
T 4a11_B 165 -GPKVQLCDLKSGSCSHILQ---GHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVES 239 (408)
T ss_dssp -SSSEEEEESSSSCCCEEEC---CCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTT
T ss_pred -CCeEEEEeCCCcceeeeec---CCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecc
Confidence 3578999999999988776 45454 77777 5665 7789999999999998865 33322
Q ss_pred --ccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 310 --RTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 310 --~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
..+...+.+..|.++++++++.+. |+|.+||++.
T Consensus 240 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 240 ANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 567778889999999998888876 8999999987
No 83
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.39 E-value=2.8e-11 Score=111.40 Aligned_cols=182 Identities=12% Similarity=0.157 Sum_probs=132.4
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCce-----------EEEEeccCc--------------eEEEEEcCCe--EEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-----------MLYSISDKH--------------VQEIKISPGI--MLLI 242 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs-----------~lysIs~~~--------------VqEIkiSpg~--~Ll~ 242 (396)
-+.|++ +|..|+....|+.++|||+.+.+ .+..+.+-. |..++++|+- -.++
T Consensus 33 ~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~ 111 (447)
T 3dw8_B 33 TVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFL 111 (447)
T ss_dssp EEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEE
T ss_pred EEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEE
Confidence 468998 89999999999999999999776 566666544 9999999885 3334
Q ss_pred EecCCCeeeeEEEEeecCcEEEE------------------------------------E-EeecccCCc---cchhhhh
Q 016020 243 FNRSSSHVPLKILSIEDGTVLKV------------------------------------F-YHLLHRNKK---VDFIEQF 282 (396)
Q Consensus 243 ~q~~~~~iplkIl~IetG~~l~s------------------------------------~-~~~L~~sk~---i~FiE~~ 282 (396)
.... +..++||++.+++.... . .+...|+.. +.|.+ .
T Consensus 112 s~s~--d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~ 188 (447)
T 3dw8_B 112 LSTN--DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS-D 188 (447)
T ss_dssp EEEC--SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT-T
T ss_pred EeCC--CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC-C
Confidence 4433 57789999999776321 0 112245554 77888 7
Q ss_pred cceeeEeecCCeeeEEEcc-cceEEEe-------cccccCCCceEEEeecC-eEEEEEEc-CeEEEEeccc-ce----ee
Q 016020 283 NEKLLVKQENENLQILDVR-NAELMEV-------SRTEFMTPSAFIFLYEN-QLFLTFRN-RTVAVWNFRG-EL----VT 347 (396)
Q Consensus 283 ~ekLLIKQed~~L~I~Dv~-~~ki~~v-------~~t~~~~PsAFiFly~~-qLFLTfs~-gti~iWd~~g-eL----~t 347 (396)
+++|+.. .|+.|+|||+. .++.+.+ ..++...+.+..|.+++ +++++-+. |+|.+||++. ++ +.
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 8999998 89999999999 4656652 56788889999999998 88888876 9999999987 55 67
Q ss_pred eeccccc------------c---CCCCCCCcEEEccCCcEEEEe
Q 016020 348 SFEDHLL------------W---HPDCNTNNIYITSDQDLIISY 376 (396)
Q Consensus 348 ~fedh~l------------~---~~~c~~n~~~it~~qd~ii~~ 376 (396)
.++.|.- . ....+++.++++.+...|.-|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iw 311 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVW 311 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEE
T ss_pred EeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEE
Confidence 8888753 1 122567777777666444333
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.39 E-value=5.2e-11 Score=109.59 Aligned_cols=243 Identities=9% Similarity=0.153 Sum_probs=156.3
Q ss_pred ccceEEEeec--cchhhhhhccccceeeeccccc-----------eEEEecCCC-----------CceEEEEeeecCC--
Q 016020 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNR-----------RICFLNVSP-----------DEVIRSLFYNKNN-- 141 (396)
Q Consensus 88 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~-----------~ic~lN~s~-----------~evIrsifyN~~n-- 141 (396)
...|.-+-+. ..++++-...|....|+..+++ .+..+.... ++-|.+|=++...
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 3455555544 3466666778999999998887 466666433 1667888888765
Q ss_pred CeEEEEEeEecCCCceeeeEeeehhhh---------hhCCCCC-------CCcceee------------cccCCC---Ce
Q 016020 142 DSLITVSVYASDNFSSLKCRSTKIEYI---------RRGKPDS-------GFALFES------------ESLKWP---GF 190 (396)
Q Consensus 142 ~slI~vSv~~sd~~s~L~cr~~~~~~i---------~~gk~~~-------~~~LF~~------------~~l~~P---gf 190 (396)
..|++.| .|. .++.-.+.-... ..|++.. ..|.+.. ....|. --
T Consensus 108 ~~l~s~s---~d~--~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 108 AQFLLST---NDK--TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp SEEEEEE---CSS--CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred ceEEEeC---CCC--eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 3444432 233 333332221100 0011000 0011100 011233 35
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEe--------c--cCceEEEEEcCCe-EEEEEecCCCeeeeEEEEeec
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI--------S--DKHVQEIKISPGI-MLLIFNRSSSHVPLKILSIED 259 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysI--------s--~~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~Iet 259 (396)
+.|.+ +|+.++.. .|+.++|||+.+....+.+ . ...|..+.++|.- .+++.... +..++|||+.+
T Consensus 183 ~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~ 258 (447)
T 3dw8_B 183 ISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS--KGTIRLCDMRA 258 (447)
T ss_dssp EEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET--TSCEEEEETTT
T ss_pred EEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC--CCeEEEEECcC
Confidence 78888 78888877 7999999999965544442 2 2669999999975 45555555 45789999999
Q ss_pred CcE----EEEEEeecccC---------------CccchhhhhcceeeEeecCCeeeEEEccc-ceEEEecccccCCCc--
Q 016020 260 GTV----LKVFYHLLHRN---------------KKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTEFMTPS-- 317 (396)
Q Consensus 260 G~~----l~s~~~~L~~s---------------k~i~FiE~~~ekLLIKQed~~L~I~Dv~~-~ki~~v~~t~~~~Ps-- 317 (396)
|+. +..+. .+. ..+.|.+ .+.+|+...+ +.++|||+.+ ++.+.+...|....+
T Consensus 259 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l 333 (447)
T 3dw8_B 259 SALCDRHSKLFE---EPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKL 333 (447)
T ss_dssp CSSSCTTCEEEC---CC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTH
T ss_pred CccccceeeEec---cCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccc
Confidence 997 56665 333 2378888 8899999999 9999999998 888877766643222
Q ss_pred -------------eEEEeecCeEEEEEEc-CeEEEEecccc
Q 016020 318 -------------AFIFLYENQLFLTFRN-RTVAVWNFRGE 344 (396)
Q Consensus 318 -------------AFiFly~~qLFLTfs~-gti~iWd~~ge 344 (396)
..-|.++++++++-+. |+|.+||++..
T Consensus 334 ~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 334 CSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp HHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred cccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 2789999998888876 99999999984
No 85
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.39 E-value=6.3e-11 Score=118.11 Aligned_cols=257 Identities=10% Similarity=0.105 Sum_probs=174.9
Q ss_pred chhhhhhccccceeeeccccceEE--EecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC
Q 016020 99 DIVFALAHSGVCAAFSRETNRRIC--FLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 176 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~~ic--~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~ 176 (396)
.+|+.-...|....||..+++..+ .+. .+..-|++|=++..+..|++++. ..+.+ -+++... .|+...
T Consensus 72 ~~lasg~~d~~v~lWd~~~~~~~~~~~~~-~~~~~v~~v~fs~dg~~l~~~~~-~~~~~--~~v~~wd-----~~~~~~- 141 (611)
T 1nr0_A 72 YYCASGDVHGNVRIWDTTQTTHILKTTIP-VFSGPVKDISWDSESKRIAAVGE-GRERF--GHVFLFD-----TGTSNG- 141 (611)
T ss_dssp SEEEEEETTSEEEEEESSSTTCCEEEEEE-CSSSCEEEEEECTTSCEEEEEEC-CSSCS--EEEEETT-----TCCBCB-
T ss_pred cEEEEEeCCCCEEEeECCCCcceeeEeec-ccCCceEEEEECCCCCEEEEEEC-CCCce--eEEEEee-----CCCCcc-
Confidence 466666678999999987665443 343 34556889999987776665432 11111 1222221 121100
Q ss_pred CcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEE
Q 016020 177 FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKI 254 (396)
Q Consensus 177 ~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkI 254 (396)
-+. .--...--|.|.+.....++..+.|+++|+||+.+++++..+.+ ..|..+++||+--+|+.... +..++|
T Consensus 142 --~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~--D~~i~l 216 (611)
T 1nr0_A 142 --NLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG--DGTIVL 216 (611)
T ss_dssp --CCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEE
T ss_pred --eec-CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC--CCcEEE
Confidence 011 01111235788884444688899999999999999999999986 67999999987766676665 567999
Q ss_pred EEeecCcEEEEEEe----ecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccc---cCCCceEEEeec
Q 016020 255 LSIEDGTVLKVFYH----LLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE---FMTPSAFIFLYE 324 (396)
Q Consensus 255 l~IetG~~l~s~~~----~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~---~~~PsAFiFly~ 324 (396)
|++.+|+.+..+.. ...|+.. +.|.+ .+++|+....|+.++|||+.++++....+.+ .....+..| +
T Consensus 217 wd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~ 293 (611)
T 1nr0_A 217 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--T 293 (611)
T ss_dssp EETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--C
T ss_pred EECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE--c
Confidence 99999999887631 0135544 78888 8999999999999999999999988755432 222334444 7
Q ss_pred CeEEEEEEc-CeEEEEeccc-ceeeeeccccccCC---CCCCCcEEEccCCcEE
Q 016020 325 NQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHP---DCNTNNIYITSDQDLI 373 (396)
Q Consensus 325 ~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~---~c~~n~~~it~~qd~i 373 (396)
++.+++.+. |++.+||.+. +....+..|.-+.. ..|+++..+|+..|=-
T Consensus 294 ~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~ 347 (611)
T 1nr0_A 294 KQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGH 347 (611)
T ss_dssp SSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc
Confidence 778888887 9999999987 56667777754322 2567777777665533
No 86
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.39 E-value=3.4e-11 Score=111.82 Aligned_cols=180 Identities=9% Similarity=0.064 Sum_probs=135.2
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecC-cEEEE
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDG-TVLKV 265 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG-~~l~s 265 (396)
-+.+++...+..++...+.|+.++|||+++.+.+.++.. ..|..++++++..++... -.++||++.++ +.+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~-----~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYG-----DVISVFKFGNPWKRITD 135 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEET-----TEEEEEESSTTCCBSSC
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEc-----CEEEEEECCCCceeeEE
Confidence 566788775555555667789999999999999988876 789999999998766542 24899999999 76665
Q ss_pred EEeecccCCccchhhhhcceeeE--eecCCeeeEEEcccce----------------EEEecccccCCCceEEEeecCeE
Q 016020 266 FYHLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNAE----------------LMEVSRTEFMTPSAFIFLYENQL 327 (396)
Q Consensus 266 ~~~~L~~sk~i~FiE~~~ekLLI--KQed~~L~I~Dv~~~k----------------i~~v~~t~~~~PsAFiFly~~qL 327 (396)
+.. ...-+.|.. .+|++ ...++.+++||+.+++ +..+..+|...+.+.-|.+++++
T Consensus 136 ~~~---~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~ 209 (355)
T 3vu4_A 136 DIR---FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM 209 (355)
T ss_dssp CEE---EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred ecc---CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence 542 212233333 67777 5899999999999876 25677899999999999999999
Q ss_pred EEEEEc-Ce-EEEEecc-cceeeeec-c-ccccC---CCCCCCcEEEccCCcEEEEecc
Q 016020 328 FLTFRN-RT-VAVWNFR-GELVTSFE-D-HLLWH---PDCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 328 FLTfs~-gt-i~iWd~~-geL~t~fe-d-h~l~~---~~c~~n~~~it~~qd~ii~~~~ 378 (396)
++|-+. |+ |++||++ |+.+..|. + |.-.. ...|++++++|...|=-|--.+
T Consensus 210 l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 210 VATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 999988 88 9999998 47888887 3 54332 2267888888887775444443
No 87
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.39 E-value=5.6e-12 Score=114.68 Aligned_cols=186 Identities=12% Similarity=0.109 Sum_probs=128.4
Q ss_pred EEeeC-CCCcEEEeecCCCeEEEEeccCc--eEEEEecc--CceEEEEEcCC--eEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 191 VEFDD-VNGKVLTYSAQDSIYKVFDLKNY--TMLYSISD--KHVQEIKISPG--IMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 191 VEFDd-~NgkIlt~~a~d~~YrVwdlknY--s~lysIs~--~~VqEIkiSpg--~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
+.|.+ .+|..|+..+.|+.++|||+++. +.++.+.+ ..|..+.++|+ -.+|+.... +..++||++.++...
T Consensus 63 v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~--D~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 63 VAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS--DGAISLLTYTGEGQW 140 (316)
T ss_dssp EEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS--SSCEEEEEECSSSCE
T ss_pred EEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC--CCCEEEEecCCCCCc
Confidence 46764 35889999999999999999986 46777764 67999999985 333444444 467899999987543
Q ss_pred EEEEeecccCCc---cchhhh----------------hcceeeEeecCCeeeEEEcccc---eEEEecccccCCCceEEE
Q 016020 264 KVFYHLLHRNKK---VDFIEQ----------------FNEKLLVKQENENLQILDVRNA---ELMEVSRTEFMTPSAFIF 321 (396)
Q Consensus 264 ~s~~~~L~~sk~---i~FiE~----------------~~ekLLIKQed~~L~I~Dv~~~---ki~~v~~t~~~~PsAFiF 321 (396)
.....+-.|+.. +.|.+. .+.+|+....|+.++|||+.++ +.......|..+..+.-|
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 222222234433 445442 1468999999999999999865 567788899999999999
Q ss_pred eecC----eEEEEEEc-CeEEEEeccc--------ceeeeeccccccCCCCCCCcEEEccCCcEEEEecc
Q 016020 322 LYEN----QLFLTFRN-RTVAVWNFRG--------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 322 ly~~----qLFLTfs~-gti~iWd~~g--------eL~t~fedh~l~~~~c~~n~~~it~~qd~ii~~~~ 378 (396)
.+++ ++++|-+. |+|.+||++. .++..+++.+.-....|++++++|+..|=-|-..+
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 9986 77888876 9999999875 12223333222222356777777665553333333
No 88
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.39 E-value=5.5e-11 Score=105.69 Aligned_cols=150 Identities=11% Similarity=0.122 Sum_probs=118.1
Q ss_pred EEeeCC-CCcEEEeecCCCeEEEEeccCce--EEEEecc--CceEEEEEcCC--eEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 191 VEFDDV-NGKVLTYSAQDSIYKVFDLKNYT--MLYSISD--KHVQEIKISPG--IMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 191 VEFDd~-NgkIlt~~a~d~~YrVwdlknYs--~lysIs~--~~VqEIkiSpg--~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
+.|.+. +|..++..+.|+.++|||+.+.+ .+..+.. ..|..+.++|. -.+++.... ...++||++.+++..
T Consensus 61 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~ 138 (379)
T 3jrp_A 61 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS--DGKVSVVEFKENGTT 138 (379)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--TSEEEEEECCTTSCC
T ss_pred EEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC--CCcEEEEecCCCCce
Confidence 567542 48899999999999999999987 6666654 78999999986 444444444 467899999999655
Q ss_pred EEEEeecccCCc---cchhhh------------hcceeeEeecCCeeeEEEcccce----EEEecccccCCCceEEEeec
Q 016020 264 KVFYHLLHRNKK---VDFIEQ------------FNEKLLVKQENENLQILDVRNAE----LMEVSRTEFMTPSAFIFLYE 324 (396)
Q Consensus 264 ~s~~~~L~~sk~---i~FiE~------------~~ekLLIKQed~~L~I~Dv~~~k----i~~v~~t~~~~PsAFiFly~ 324 (396)
....+. .+... +.|.+. .+.+|++...|+.|++||+.+++ +......|...+.+..|.++
T Consensus 139 ~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 139 SPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp CEEEEE-CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred eeEEec-CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCC
Confidence 544322 44443 667764 58899999999999999999864 55567788889999999999
Q ss_pred ---CeEEEEEEc-CeEEEEeccc
Q 016020 325 ---NQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 325 ---~qLFLTfs~-gti~iWd~~g 343 (396)
++++++.+. |+|.+||++.
T Consensus 218 ~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 218 VLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp CSSSEEEEEEETTSCEEEEEESS
T ss_pred CCCCCeEEEEeCCCEEEEEeCCC
Confidence 888888886 9999999987
No 89
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.38 E-value=9.8e-11 Score=107.10 Aligned_cols=154 Identities=12% Similarity=0.128 Sum_probs=117.9
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
+.|++ +|..++..+.|+++||||+++.+.+..+.+ ..|..+.+||+-..++.... +-.++|||+. |+.......
T Consensus 82 ~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~--d~~i~~wd~~-~~~~~~~~~ 157 (343)
T 2xzm_R 82 LALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA--EREIKLWNIL-GECKFSSAE 157 (343)
T ss_dssp EEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET--TSCEEEEESS-SCEEEECCT
T ss_pred EEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC--CCEEEEEecc-CCceeeeec
Confidence 56877 788889999999999999999999988875 78999999987666666555 5779999997 433332221
Q ss_pred ecccCCc---cchhhh---------hcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-Ce
Q 016020 269 LLHRNKK---VDFIEQ---------FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RT 335 (396)
Q Consensus 269 ~L~~sk~---i~FiE~---------~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gt 335 (396)
...+... +.|.+. ++.+|+....|+.|++|| .+.++..+...|...+.+.-|.+++++++|-+. |+
T Consensus 158 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 158 KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe
Confidence 1122222 444442 347899999999999999 566777777889999999999999999999886 99
Q ss_pred EEEEeccc--ceeeee
Q 016020 336 VAVWNFRG--ELVTSF 349 (396)
Q Consensus 336 i~iWd~~g--eL~t~f 349 (396)
|.+||+.. .....+
T Consensus 237 v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 237 LLIWDILNLTYPQREF 252 (343)
T ss_dssp EEEEESSCCSSCSEEE
T ss_pred EEEEECCCCcccceee
Confidence 99999943 344444
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.38 E-value=1.9e-11 Score=113.34 Aligned_cols=188 Identities=14% Similarity=0.107 Sum_probs=139.3
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCceEE----EEec--cCceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecC
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML----YSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 260 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~l----ysIs--~~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG 260 (396)
+.|+.+++....+++..+.|+.++|||+.....+ ..+. ...|..+.++| +-.+|+.... +..++||++.+|
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~--dg~v~vw~~~~~ 114 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE--DCTVMVWEIPDG 114 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET--TSEEEEEECCTT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC--CCeEEEEEccCC
Confidence 4577787755566666788999999999665432 2232 37899999998 5555555554 467999999999
Q ss_pred -------cEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEec--ccccCCCceEEEeecCeEE
Q 016020 261 -------TVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS--RTEFMTPSAFIFLYENQLF 328 (396)
Q Consensus 261 -------~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~--~t~~~~PsAFiFly~~qLF 328 (396)
+.+..+. .|... +.|.+.-...|++...|+.|+|||+.+++..... ..|...+.+..|.++++++
T Consensus 115 ~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 115 GLVLPLREPVITLE---GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp CCSSCBCSCSEEEE---CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE
T ss_pred CCccccCCceEEec---CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE
Confidence 5566665 55555 6777733368999999999999999999999887 7888999999999999998
Q ss_pred EEEEc-CeEEEEeccc-ceeeee-ccccccC----CCCCCCcEEEcc---CCcEEEEeccCC
Q 016020 329 LTFRN-RTVAVWNFRG-ELVTSF-EDHLLWH----PDCNTNNIYITS---DQDLIISYCKAE 380 (396)
Q Consensus 329 LTfs~-gti~iWd~~g-eL~t~f-edh~l~~----~~c~~n~~~it~---~qd~ii~~~~~~ 380 (396)
++-+. |+|.+||++. +.+..+ ..|.-.. ...+++.++++. ..|=-|......
T Consensus 192 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred EEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 88876 9999999886 677677 5554321 125677777776 455555544443
No 91
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.4e-11 Score=112.30 Aligned_cols=169 Identities=11% Similarity=0.034 Sum_probs=123.0
Q ss_pred EEeecCCCeEEEEeccC---------ceEEEEecc---CceEEEEEcC--CeEEEEEecCCCeeeeEEEEeecCcEEEEE
Q 016020 201 LTYSAQDSIYKVFDLKN---------YTMLYSISD---KHVQEIKISP--GIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (396)
Q Consensus 201 lt~~a~d~~YrVwdlkn---------Ys~lysIs~---~~VqEIkiSp--g~~Ll~~q~~~~~iplkIl~IetG~~l~s~ 266 (396)
++..+.|+.+++|+..+ .+.+..+.. ..|..+.++| .-.+++.... +..++|||+++|+.+..+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~--dg~i~~wd~~~~~~~~~~ 165 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADN--RGTIGFQSYEDDSQYIVH 165 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEET--TCCEEEEESSSSCEEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Confidence 66678899999997664 444444441 4689999998 5555555554 567899999999996544
Q ss_pred EeecccCC---ccchhhhhcceeeEeecCCeeeEEEcccceEE-Eeccc-ccCCCceEEEeecCeEEEEEEcCeEEEEec
Q 016020 267 YHLLHRNK---KVDFIEQFNEKLLVKQENENLQILDVRNAELM-EVSRT-EFMTPSAFIFLYENQLFLTFRNRTVAVWNF 341 (396)
Q Consensus 267 ~~~L~~sk---~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~-~v~~t-~~~~PsAFiFly~~qLFLTfs~gti~iWd~ 341 (396)
. .++.. .+.|.+ .+.+|++...|+.|+|||+++++.. ..... |..++.+.-|.++++++++-++++|.+||+
T Consensus 166 ~--~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~ 242 (343)
T 3lrv_A 166 S--AKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDL 242 (343)
T ss_dssp C--CCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEET
T ss_pred e--cCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEc
Confidence 3 13332 278888 8899999999999999999999987 55555 889999999999999999999999999999
Q ss_pred cc-ceee---eeccccccCC-----CCCCCcEEEc--c-CCcEEE
Q 016020 342 RG-ELVT---SFEDHLLWHP-----DCNTNNIYIT--S-DQDLII 374 (396)
Q Consensus 342 ~g-eL~t---~fedh~l~~~-----~c~~n~~~it--~-~qd~ii 374 (396)
+. +.+. .+++|..... ..++++++++ . |.++-|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 243 RKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp TSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEE
Confidence 98 4433 3444444422 2667888888 6 665544
No 92
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.37 E-value=4.6e-11 Score=120.07 Aligned_cols=233 Identities=11% Similarity=0.104 Sum_probs=158.3
Q ss_pred CCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCe---EEeeCCCCcEEE
Q 016020 126 VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGF---VEFDDVNGKVLT 202 (396)
Q Consensus 126 ~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgf---VEFDd~NgkIlt 202 (396)
..+...|.+|-++..+..++. +...|. .++.-.+ ..++...+. -....-.|.+. +.|.+ +|+.|+
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~--s~s~D~--~i~~W~~-----~~~~~~~~~--~~~~~~~h~~~v~~v~~s~-~g~~l~ 446 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIV--SASRDK--SIILWKL-----TKDDKAYGV--AQRRLTGHSHFVEDVVLSS-DGQFAL 446 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEE--EEETTS--EEEEEEC-----CCSTTCSCE--EEEEEECCSSCEEEEEECT-TSSEEE
T ss_pred ccCCceeEEEEecCCCCCEEE--EEeCCC--cEEEEEc-----cCCCccccc--ccceecCCCCcEEEEEECC-CCCEEE
Confidence 367778899988876655444 222332 3333322 111111111 11112235554 46777 799999
Q ss_pred eecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cc
Q 016020 203 YSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VD 277 (396)
Q Consensus 203 ~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~ 277 (396)
..+.|+++||||+.+.+.+..+.+ ..|..+.+||+--.++.... +..++||++..+...........|... +.
T Consensus 447 sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR--DRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET--TSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred EEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC--CCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 999999999999999999988876 78999999987766666665 577899998654332221111123333 56
Q ss_pred hhhhh-cceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccccc
Q 016020 278 FIEQF-NEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLL 354 (396)
Q Consensus 278 FiE~~-~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l 354 (396)
|.+.. ...|+....|+.++|||+.++++..+...|...+.+.-|.+++++++|-+. |+|.+||++. +.+.+++.+-.
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~ 604 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 604 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSC
T ss_pred EeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCc
Confidence 66532 357999999999999999999999999999999999999999999999886 9999999976 66666665432
Q ss_pred cCC--CCCCCcEEEccCCcE
Q 016020 355 WHP--DCNTNNIYITSDQDL 372 (396)
Q Consensus 355 ~~~--~c~~n~~~it~~qd~ 372 (396)
.+. .++++.+..++..+-
T Consensus 605 v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp EEEEEECSSSSEEEEEETTE
T ss_pred EEEEEEcCCCcEEEEEcCCC
Confidence 211 145555555554443
No 93
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.37 E-value=1.1e-11 Score=122.96 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=113.1
Q ss_pred EeeCC--CCcEEEeecCCCeEEEEeccCceEEEEecc-----CceEEEEEcCCeEEEEEec----------CCCeeeeEE
Q 016020 192 EFDDV--NGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KHVQEIKISPGIMLLIFNR----------SSSHVPLKI 254 (396)
Q Consensus 192 EFDd~--NgkIlt~~a~d~~YrVwdlknYs~lysIs~-----~~VqEIkiSpg~~Ll~~q~----------~~~~iplkI 254 (396)
-|.++ +|..|++.+.|+++||||+++.+++..+.+ ..+..+.+||+-.+++... ...+..+++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 44443 679999999999999999999999999974 2466778997666554322 234688999
Q ss_pred EEeecCcEEEEEEeecccCCccchhhh--hcceeeEeecCCeeeEEEcccceEEEecccccCCCce-EEEeecCeEEEEE
Q 016020 255 LSIEDGTVLKVFYHLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSA-FIFLYENQLFLTF 331 (396)
Q Consensus 255 l~IetG~~l~s~~~~L~~sk~i~FiE~--~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsA-FiFly~~qLFLTf 331 (396)
|+..+|+.+..+..-++......|++- .+..+.....|+.++|||+.+++++.+..+|...+-. .-|.|++++.+|-
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred EECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 999999998765433322222223321 1346788889999999999999999999999887765 5699999999998
Q ss_pred Ec-CeEEEEecc
Q 016020 332 RN-RTVAVWNFR 342 (396)
Q Consensus 332 s~-gti~iWd~~ 342 (396)
+. ++|+|||+.
T Consensus 345 S~D~TIklWd~~ 356 (356)
T 2w18_A 345 QKDGNIFVYHYS 356 (356)
T ss_dssp CTTSCEEEEEEC
T ss_pred ECCCcEEEecCC
Confidence 87 899999963
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.36 E-value=5.9e-11 Score=103.61 Aligned_cols=145 Identities=12% Similarity=0.126 Sum_probs=121.5
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc----CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD----KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~----~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~ 266 (396)
+.|.. ++ +||.. .|+++||||+++.+++..+.. ..|..++++|+-.+++.... +..++||++++|+.+..+
T Consensus 31 l~WS~-~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~--Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 31 VDWSS-GN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS--SAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEECT-TS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEE
T ss_pred EEECC-CC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC--CCcEEEeecCCceeEEEe
Confidence 66776 34 66654 599999999999998877653 56999999998877777766 567899999999999987
Q ss_pred EeecccCCccchhhhhcceeeEeecCCeeeEEEcccc-eEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 267 YHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNA-ELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 267 ~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~-ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
. .|+..+......+..|+....+..+.+|+..++ ..+.+..+|........|.++++++++-+. |+|.+||.+.
T Consensus 106 ~---~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 T---SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp E---CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred c---CccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 7 667776666778889999999999999999985 555678889999999999999999998887 9999999975
No 95
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.36 E-value=6.9e-11 Score=112.68 Aligned_cols=263 Identities=11% Similarity=0.085 Sum_probs=172.5
Q ss_pred ceEEEee-ccchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeE-------
Q 016020 90 KVIEIVA-ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCR------- 161 (396)
Q Consensus 90 ~V~EIv~-a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr------- 161 (396)
.+..+.. ....+++-...|....||..+++.+..+.. +..-|.++-+ .. +++.| .|. .++.-
T Consensus 300 ~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~-~~~~v~~~~~-~~---l~~~~---~dg--~i~~w~~~~~~~ 369 (615)
T 1pgu_A 300 QQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISG-HNKGITALTV-NP---LISGS---YDG--RIMEWSSSSMHQ 369 (615)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECC-CSSCEEEEET-TT---TEEEE---TTS--CEEETTTTEEEC
T ss_pred ceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeC-CCCCEEEEEe-cC---cEEEC---CCC--eEEEEEchhhcC
Confidence 3333433 466778888899999999999998888865 4455666666 43 44433 111 11110
Q ss_pred ---------eee-hhhhhhCCCCCCCcceee---cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-C
Q 016020 162 ---------STK-IEYIRRGKPDSGFALFES---ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-K 227 (396)
Q Consensus 162 ---------~~~-~~~i~~gk~~~~~~LF~~---~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~ 227 (396)
+.+ -..|-.|-.+..-.++.. .....|--+.|.+ +|+.++.. .++.+++|++.+.+.+..+.. .
T Consensus 370 ~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 447 (615)
T 1pgu_A 370 DHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANN-DGFTAVLT-NDDDLLILQSFTGDIIKSVRLNS 447 (615)
T ss_dssp CCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECS-SSEEEEEE-TTSEEEEEETTTCCEEEEEECSS
T ss_pred cccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcC-CCCEEEEe-CCCceEEEeccCCceeeecccCC
Confidence 000 000000000000011111 1122455566665 56666554 677778888878888887775 7
Q ss_pred ceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccce
Q 016020 228 HVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAE 304 (396)
Q Consensus 228 ~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~k 304 (396)
.+..+.++ |-+|+..... ...+++|++.+|+... ..+..+... +.|.+ .+++|++...|+.|+|||+.+++
T Consensus 448 ~~~~~~~~-~~~l~~~~~~--d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~ 521 (615)
T 1pgu_A 448 PGSAVSLS-QNYVAVGLEE--GNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISP-SETYIAAGDVMGKILLYDLQSRE 521 (615)
T ss_dssp CEEEEEEC-SSEEEEEETT--TSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTE
T ss_pred CceEEEEc-CCEEEEeecC--CCeEEEEECCCccccc--cccCCccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCc
Confidence 89999999 6666555441 3568999999987654 222244444 77777 89999999999999999999999
Q ss_pred EEEeccc-ccCCCceEEEee----------cCeEEEEEEc-CeEEEEeccc--ceeeeeccccccCCC---CCCCcEEEc
Q 016020 305 LMEVSRT-EFMTPSAFIFLY----------ENQLFLTFRN-RTVAVWNFRG--ELVTSFEDHLLWHPD---CNTNNIYIT 367 (396)
Q Consensus 305 i~~v~~t-~~~~PsAFiFly----------~~qLFLTfs~-gti~iWd~~g--eL~t~fedh~l~~~~---c~~n~~~it 367 (396)
.+....+ |...+.+..|.+ +++++++.+. |+|.+||++. +++..+..|...... ++++. .+|
T Consensus 522 ~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s 600 (615)
T 1pgu_A 522 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVS 600 (615)
T ss_dssp EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEE
T ss_pred ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEE
Confidence 9998887 999999999999 9999999886 8999999987 577788887543221 44444 444
Q ss_pred cCCc
Q 016020 368 SDQD 371 (396)
Q Consensus 368 ~~qd 371 (396)
...|
T Consensus 601 ~~~d 604 (615)
T 1pgu_A 601 SGAD 604 (615)
T ss_dssp EETT
T ss_pred ecCC
Confidence 4433
No 96
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.36 E-value=8.6e-11 Score=112.04 Aligned_cols=264 Identities=14% Similarity=0.129 Sum_probs=173.6
Q ss_pred ceEEEeeccc---hhhhhhccccceeeeccccceEEEecC---CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEee
Q 016020 90 KVIEIVAARD---IVFALAHSGVCAAFSRETNRRICFLNV---SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRST 163 (396)
Q Consensus 90 ~V~EIv~a~d---ii~~L~~sG~c~af~~~t~~~ic~lN~---s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~ 163 (396)
.|..+-...+ ++++-...|....||..+++.+..+.. .+..-|.++-++ ....|++.+ .|. .++.-.
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~---~d~--~i~~wd- 280 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG---ADA--TIRVWD- 280 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE---TTS--EEEEEE-
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc---CCC--cEEEEE-
Confidence 5777766644 777788899999999999999999955 777888899888 666665543 222 222221
Q ss_pred ehhhhhhCCCCCCCcceeec---ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEE----
Q 016020 164 KIEYIRRGKPDSGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKI---- 234 (396)
Q Consensus 164 ~~~~i~~gk~~~~~~LF~~~---~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIki---- 234 (396)
++.|+.- .-|... .-..+--+.|. +|..++....|+.+++||+.+.+.+..+.+ ..|..+.+
T Consensus 281 ----~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~ 351 (615)
T 1pgu_A 281 ----VTTSKCV---QKWTLDKQQLGNQQVGVVAT--GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLI 351 (615)
T ss_dssp ----TTTTEEE---EEEECCTTCGGGCEEEEEEE--ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTE
T ss_pred ----CCCCcEE---EEEcCCCCcccCceeEEEeC--CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcE
Confidence 1222110 001100 00111223443 577788888899999999999888888765 44555544
Q ss_pred -----------------------------cCCeEEEEEecCCCeeeeEEEEe----------------------------
Q 016020 235 -----------------------------SPGIMLLIFNRSSSHVPLKILSI---------------------------- 257 (396)
Q Consensus 235 -----------------------------Spg~~Ll~~q~~~~~iplkIl~I---------------------------- 257 (396)
+++-+|+..... ..+++|++
T Consensus 352 ~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 428 (615)
T 1pgu_A 352 SGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWD---DTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDD 428 (615)
T ss_dssp EEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETT---TEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSE
T ss_pred EECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCC---CCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCc
Confidence 323333222211 23444444
Q ss_pred ------ecCcEEEEEEeecccCCc---cchhhhhcceeeEeec-CCeeeEEEcccceEE-EecccccCCCceEEEeecCe
Q 016020 258 ------EDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQE-NENLQILDVRNAELM-EVSRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 258 ------etG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQe-d~~L~I~Dv~~~ki~-~v~~t~~~~PsAFiFly~~q 326 (396)
.+|+.+..+. +... +.|. ++.|++... |+.|++||+.++++. .....+...+.+.-|.++++
T Consensus 429 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 501 (615)
T 1pgu_A 429 LLILQSFTGDIIKSVR----LNSPGSAVSLS---QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 501 (615)
T ss_dssp EEEEETTTCCEEEEEE----CSSCEEEEEEC---SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS
T ss_pred eEEEeccCCceeeecc----cCCCceEEEEc---CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC
Confidence 4566665554 2223 4454 889999999 999999999999887 67788889999999999999
Q ss_pred EEEEEEc-CeEEEEeccc-ceeeeecc-ccccCC---CCC----------CCcEEEccCCcEEEEeccC
Q 016020 327 LFLTFRN-RTVAVWNFRG-ELVTSFED-HLLWHP---DCN----------TNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 327 LFLTfs~-gti~iWd~~g-eL~t~fed-h~l~~~---~c~----------~n~~~it~~qd~ii~~~~~ 379 (396)
++++-+. |+|.+||++. +++..+.. |.-... ..| ++.+++|...|=-|.-...
T Consensus 502 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 502 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp EEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred EEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEEC
Confidence 9998876 9999999965 78777776 543322 155 7778887776643333333
No 97
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.36 E-value=4.7e-11 Score=126.07 Aligned_cols=157 Identities=15% Similarity=0.200 Sum_probs=131.9
Q ss_pred CCCe---EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCc
Q 016020 187 WPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 187 ~Pgf---VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
|.+- +.|++ +|+.++..+.|+.++|||+.+.+.+.++.+ ..|..+.+||+--+++.... +..++|||+.+|+
T Consensus 614 h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~--d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 614 HTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA--DKKVKIWDSATGK 690 (1249)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCC
T ss_pred ccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC--CCeEEEEECCCCc
Confidence 4554 47888 899999999999999999999999999986 88999999987766666655 4569999999999
Q ss_pred EEEEEEeecccCCc---cchhhh-hcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeE
Q 016020 262 VLKVFYHLLHRNKK---VDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTV 336 (396)
Q Consensus 262 ~l~s~~~~L~~sk~---i~FiE~-~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti 336 (396)
.+..+. .|... +.|.+. .+..++....|+.+++||+.++++..+..+|...+.+..|.+++++++|.+. |+|
T Consensus 691 ~~~~~~---~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 691 LVHTYD---EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp EEEEEE---CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred eEEEEc---CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 999887 55555 667663 2336778899999999999999999999999999999999999999999887 999
Q ss_pred EEEeccc-ceeeee
Q 016020 337 AVWNFRG-ELVTSF 349 (396)
Q Consensus 337 ~iWd~~g-eL~t~f 349 (396)
.+||++. +....+
T Consensus 768 ~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 768 RLWDVRSANERKSI 781 (1249)
T ss_dssp EEEEGGGTEEEEEE
T ss_pred EEEeCCCCccccee
Confidence 9999987 444333
No 98
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.35 E-value=2e-11 Score=121.68 Aligned_cols=181 Identities=12% Similarity=0.107 Sum_probs=138.9
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEec--cCceEEEEEcCCeEEEEEecCCC--eeeeEEEEeecCcEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS--DKHVQEIKISPGIMLLIFNRSSS--HVPLKILSIEDGTVLK 264 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs--~~~VqEIkiSpg~~Ll~~q~~~~--~iplkIl~IetG~~l~ 264 (396)
+.|.+ +|+.||..+.|+++||||+.+.+ .+..+. ...|..+.|||+--.++...... ...+.+|+ +|+.+.
T Consensus 65 ~~~sp-dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~ 141 (611)
T 1nr0_A 65 AKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNG 141 (611)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCB
T ss_pred EEECC-CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcc
Confidence 67887 89999999999999999997654 444554 37899999998766655554432 35677776 677766
Q ss_pred EEEeecccCCc---cchhhhhcc-eeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEE
Q 016020 265 VFYHLLHRNKK---VDFIEQFNE-KLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVW 339 (396)
Q Consensus 265 s~~~~L~~sk~---i~FiE~~~e-kLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iW 339 (396)
.+. .|+.. ++|.+ .+. .|+...+|+.+++||+.++++..+..+|...+.+.-|.+++++++|-+. |+|.+|
T Consensus 142 ~l~---gh~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lw 217 (611)
T 1nr0_A 142 NLT---GQARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY 217 (611)
T ss_dssp CCC---CCSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eec---CCCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEE
Confidence 554 66655 77877 454 5999999999999999999999999999999999999999999999887 999999
Q ss_pred ecc-cceeeeec-------cccccC---CCCCCCcEEEccCCcEEEEecc
Q 016020 340 NFR-GELVTSFE-------DHLLWH---PDCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 340 d~~-geL~t~fe-------dh~l~~---~~c~~n~~~it~~qd~ii~~~~ 378 (396)
|.. |+.+..++ .|.-+. ..+|+++.++|+..|=-|--..
T Consensus 218 d~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 218 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp ETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 975 47777774 353322 2267888888877774444443
No 99
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.6e-11 Score=130.47 Aligned_cols=181 Identities=15% Similarity=0.187 Sum_probs=139.5
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
-+.|++ +|+.||....|+.+||||..+.+.+....+ ..|..++||||-.| +.... +-.++|||+++|+.+..+.
T Consensus 22 ~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L-~S~s~--D~~v~lWd~~~~~~~~~~~- 96 (902)
T 2oaj_A 22 AAAFDF-TQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYL-VVINA--KDTVYVLSLYSQKVLTTVF- 96 (902)
T ss_dssp EEEEET-TTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEE-EEEET--TCEEEEEETTTCSEEEEEE-
T ss_pred EEEECC-CCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEE-EEEEC--cCeEEEEECCCCcEEEEEc-
Confidence 468998 899999999999999999999998888765 67999999998844 44444 5789999999999998886
Q ss_pred ecccC--CccchhhhhcceeeEeecCCeeeEEEcccceEE-----------EecccccCCCceEEEeec-CeEEEEEEc-
Q 016020 269 LLHRN--KKVDFIEQFNEKLLVKQENENLQILDVRNAELM-----------EVSRTEFMTPSAFIFLYE-NQLFLTFRN- 333 (396)
Q Consensus 269 ~L~~s--k~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~-----------~v~~t~~~~PsAFiFly~-~qLFLTfs~- 333 (396)
++. .-+.|.+ .+++|++..+|+.+++||+.++++. ..+..|..++.+.-|.++ +.++++-++
T Consensus 97 --~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 97 --VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp --CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS
T ss_pred --CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC
Confidence 332 2378887 8999999999999999999999875 234667888999999995 345555444
Q ss_pred CeEEEEeccc-ceeeeeccccc---------------------cCCCCCCCcEEEccCCcEEEEeccC
Q 016020 334 RTVAVWNFRG-ELVTSFEDHLL---------------------WHPDCNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 334 gti~iWd~~g-eL~t~fedh~l---------------------~~~~c~~n~~~it~~qd~ii~~~~~ 379 (396)
|+| +||++. +.+..|+.|.+ -....|++++++|...|=-|.-...
T Consensus 174 g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 174 VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 999 999988 56667776621 1112567888888777644444443
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.3e-11 Score=112.64 Aligned_cols=171 Identities=11% Similarity=0.121 Sum_probs=129.6
Q ss_pred CCcEEEeecCCCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEE---------EeecCcEEEEEE
Q 016020 197 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKIL---------SIEDGTVLKVFY 267 (396)
Q Consensus 197 NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl---------~IetG~~l~s~~ 267 (396)
.+..++..+.|+.++|||+++.+.+..+....|..+.++|. ++.... +..+++| ++++++.+..+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~--D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGP--CNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECS--TTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecC--CCeEEEEEccCceEEeecCCcceeEEee
Confidence 36788889999999999999999999998888888888888 444444 3445555 556777676655
Q ss_pred eecccCCc---cchhhh-hcceeeEeecCCeeeEEEcccceEEEecc-cccCCCceEEEeecCeEEEEEE-cCeEEEEec
Q 016020 268 HLLHRNKK---VDFIEQ-FNEKLLVKQENENLQILDVRNAELMEVSR-TEFMTPSAFIFLYENQLFLTFR-NRTVAVWNF 341 (396)
Q Consensus 268 ~~L~~sk~---i~FiE~-~~ekLLIKQed~~L~I~Dv~~~ki~~v~~-t~~~~PsAFiFly~~qLFLTfs-~gti~iWd~ 341 (396)
+.+..+ +.|.+. .+++|+....|+.+++||+.+++...+.. .+.....+.-|.++++++.+-+ +|+|.+||+
T Consensus 122 --~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 122 --VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp --CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred --cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 345444 566552 57788999999999999999999987653 4455788999999999999855 599999999
Q ss_pred cc-cee-eeecc-ccccCCC---CCCCcEEEccCCcEEE
Q 016020 342 RG-ELV-TSFED-HLLWHPD---CNTNNIYITSDQDLII 374 (396)
Q Consensus 342 ~g-eL~-t~fed-h~l~~~~---c~~n~~~it~~qd~ii 374 (396)
+. +.+ ..|+. |.-+... ++++.+.+++..|-|.
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~ 238 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV 238 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence 88 555 67887 7654332 7788888887777433
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.34 E-value=2.3e-10 Score=107.50 Aligned_cols=241 Identities=11% Similarity=0.112 Sum_probs=161.3
Q ss_pred ceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhh
Q 016020 90 KVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 167 (396)
Q Consensus 90 ~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~ 167 (396)
.|.-+-+. ..+++.-...|....||..+++.+..+.. +...|.++-+|. .-|.+ ...|. .++. . +
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~-h~~~v~~~s~~~--~~l~s---gs~d~--~i~~--~---d 215 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSLSWNS--YILSS---GSRSG--HIHH--H---D 215 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEET--TEEEE---EETTS--EEEE--E---E
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC-CCCceEEEeeCC--CEEEE---EeCCC--ceeE--e---e
Confidence 46655554 34677777889999999999999988865 445566777763 32222 22222 1111 1 1
Q ss_pred hhhCCCCCCCccee-ecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce----EEEEec--cCceEEEEEcCC-eE
Q 016020 168 IRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT----MLYSIS--DKHVQEIKISPG-IM 239 (396)
Q Consensus 168 i~~gk~~~~~~LF~-~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs----~lysIs--~~~VqEIkiSpg-~~ 239 (396)
.+.+. ..+-. ...-...-.+.+.+ +|+.++....|+.++|||+.+.+ .+.... ...|..+.++|. ..
T Consensus 216 ~~~~~----~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~ 290 (420)
T 4gga_A 216 VRVAE----HHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN 290 (420)
T ss_dssp TTSSS----CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTT
T ss_pred ecccc----eeeEEecccccceeeeeecC-CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCccc
Confidence 11110 00100 01111122344555 79999999999999999998765 233333 367999999973 34
Q ss_pred EEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc--cchhhhhcceeeEee--cCCeeeEEEcccceEEEecccccCC
Q 016020 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK--VDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMT 315 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~--i~FiE~~~ekLLIKQ--ed~~L~I~Dv~~~ki~~v~~t~~~~ 315 (396)
+++......+..++|||+.+|+.+..+. ++..- +.|.. .+..|++.. .|+.|+|||+.+++++.+..+|...
T Consensus 291 ~la~~~gs~D~~I~iwd~~t~~~~~~~~---~~~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~ 366 (420)
T 4gga_A 291 VLATGGGTSDRHIRIWNVCSGACLSAVD---AHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR 366 (420)
T ss_dssp EEEEEECTTTCEEEEEETTTTEEEEEEE---CSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred EEEEEeecCCCEEEEEeCCccccceeec---cccceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 4444444456789999999999999877 33222 56666 666777654 7899999999999999999999999
Q ss_pred CceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccc
Q 016020 316 PSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDH 352 (396)
Q Consensus 316 PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh 352 (396)
+.+.-|.+++++++|-+. |+|+|||+.. +-....|.+
T Consensus 367 V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~ 405 (420)
T 4gga_A 367 VLSLTMSPDGATVASAAADETLRLWRCFELDPARRRERE 405 (420)
T ss_dssp EEEEEECTTSSCEEEEETTTEEEEECCSCSSCC------
T ss_pred EEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhc
Confidence 999999999999999987 9999999865 444444544
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.34 E-value=1.7e-10 Score=121.73 Aligned_cols=262 Identities=15% Similarity=0.211 Sum_probs=191.0
Q ss_pred ccceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 88 RTKVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 88 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
...|.-+-+. ..+++.-...|....||..|++.+..+. .+..-|.++=++..+..|++.| .|. . .+.-
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~---~d~--~--v~vw-- 684 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCS---ADK--K--VKIW-- 684 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEE---TTS--E--EEEE--
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEEEEe---CCC--e--EEEE--
Confidence 3445555544 3356666778999999999999999887 4566778888888777666643 232 2 2222
Q ss_pred hhhhhCCCCCCCcceeecccCCCC---eEEeeCC-CCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCeE
Q 016020 166 EYIRRGKPDSGFALFESESLKWPG---FVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGIM 239 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~~~l~~Pg---fVEFDd~-NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~ 239 (396)
++..|+ ++..-. .|++ -+.|.+. ++.+++..+.|+.++|||+.+.+.+..+.+ ..|..+.++|+-.
T Consensus 685 -d~~~~~-----~~~~~~--~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 685 -DSATGK-----LVHTYD--EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp -ETTTCC-----EEEEEE--CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT
T ss_pred -ECCCCc-----eEEEEc--CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC
Confidence 222232 222110 1222 3456554 677899999999999999999999999876 7899999998776
Q ss_pred EEEEecCCCeeeeEEEEeecCcEEEEEEeec---c----------cCCccchhhhhcceeeEeecCCeeeEEEcccceEE
Q 016020 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLL---H----------RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM 306 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L---~----------~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~ 306 (396)
.++.... +..+++|++.+|+....+...- . .-..+.|.+ .+..|++.. ++.+.+||+.+++..
T Consensus 757 ~l~s~s~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~-~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 757 LLASCSA--DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA-DGDKIIVAA-KNKVLLFDIHTSGLL 832 (1249)
T ss_dssp EEEEEES--SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT-TSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred EEEEEEC--CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCce
Confidence 6666665 4679999999999998876211 0 112367777 788888887 678999999998877
Q ss_pred Eec-ccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc-ceeeeeccccccCCC---CCCCcEEEccCCc
Q 016020 307 EVS-RTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHPD---CNTNNIYITSDQD 371 (396)
Q Consensus 307 ~v~-~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~~---c~~n~~~it~~qd 371 (396)
... ..+...+.+..|.+++.++++-+. |+|.+||++. ..+..+..|.-+... +++++.++|...|
T Consensus 833 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 833 AEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp EEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCC
Confidence 744 488889999999999999888877 9999999998 677888888665432 6777777777666
No 103
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.33 E-value=7.4e-11 Score=111.66 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=119.3
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc----CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD----KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~----~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
-+.|.+.+|..|+..+.|+++||||+++......... ..+..+.++|+-.+++.... ...++|||+. |+.+..
T Consensus 169 ~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~--dg~i~~wd~~-~~~~~~ 245 (435)
T 4e54_B 169 GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN--VGNVILLNMD-GKELWN 245 (435)
T ss_dssp EEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS--SSBEEEEESS-SCBCCC
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC--CCcEeeeccC-cceeEE
Confidence 4689988899999999999999999998764433332 34678899987766666655 4568999985 555554
Q ss_pred EEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEE---ecccccCCCceEEEeecCeEEEEEEc-CeEEE
Q 016020 266 FYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELME---VSRTEFMTPSAFIFLYENQLFLTFRN-RTVAV 338 (396)
Q Consensus 266 ~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~---v~~t~~~~PsAFiFly~~qLFLTfs~-gti~i 338 (396)
+. .|... +.|.+.-...|+....|+.++|||+++.+... ...+|.....+.-|.+++++++|-+. |+|.|
T Consensus 246 ~~---~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i 322 (435)
T 4e54_B 246 LR---MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV 322 (435)
T ss_dssp SB---CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred Ee---cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence 44 45555 67877444467788999999999999876443 33567778888899999999988887 99999
Q ss_pred Eeccc-ceeeeecccc
Q 016020 339 WNFRG-ELVTSFEDHL 353 (396)
Q Consensus 339 Wd~~g-eL~t~fedh~ 353 (396)
||++. +....+..|.
T Consensus 323 wd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 323 YSASQWDCPLGLIPHP 338 (435)
T ss_dssp EESSSSSSEEEECCCC
T ss_pred EECCCCccceEEeccc
Confidence 99976 6666666554
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.33 E-value=1.3e-11 Score=116.78 Aligned_cols=177 Identities=9% Similarity=0.047 Sum_probs=126.8
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceE--EEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~--lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
+.|.+.++.+||..+.|+.++|||+.+.+. +....+ ..|..|+|+| +-.+|+.... +..++|||++++.....
T Consensus 125 l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~--D~~v~iwd~~~~~~~~~ 202 (435)
T 4e54_B 125 LAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM--EGTTRLQDFKGNILRVF 202 (435)
T ss_dssp EEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS--SSCEEEEETTSCEEEEE
T ss_pred EEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC--CCEEEEeeccCCceeEE
Confidence 688888899999999999999999987763 444433 7899999996 3333455544 46789999987654332
Q ss_pred EEeecccCC-----ccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEEEc-CeEEE
Q 016020 266 FYHLLHRNK-----KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFRN-RTVAV 338 (396)
Q Consensus 266 ~~~~L~~sk-----~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs~-gti~i 338 (396)
.. ++.. .++|.+ .+.+|++...|+.|++||+..+ .+.....|.....+.-|.++++ ++++-+. |+|.+
T Consensus 203 ~~---~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~i 277 (435)
T 4e54_B 203 AS---SDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 277 (435)
T ss_dssp EC---CSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCE
T ss_pred ec---cCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcceeeE
Confidence 22 2221 266766 7899999999999999998654 4556778889999999998876 6667665 99999
Q ss_pred Eeccc-ceee---eecccccc---CCCCCCCcEEEccCCcEEE
Q 016020 339 WNFRG-ELVT---SFEDHLLW---HPDCNTNNIYITSDQDLII 374 (396)
Q Consensus 339 Wd~~g-eL~t---~fedh~l~---~~~c~~n~~~it~~qd~ii 374 (396)
||++. +... ....|.-+ ...+++++.++|...|=-|
T Consensus 278 wd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 278 WDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp EETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred EecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 99876 3222 22344332 2336788888887776433
No 105
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.33 E-value=4.4e-11 Score=103.37 Aligned_cols=151 Identities=11% Similarity=0.179 Sum_probs=117.7
Q ss_pred eEEeeCC-CCcEEEeecCCCeEEEEeccCc---------eEEEEecc--CceEEEEEcCC--eEEEEEecCCCeeeeEEE
Q 016020 190 FVEFDDV-NGKVLTYSAQDSIYKVFDLKNY---------TMLYSISD--KHVQEIKISPG--IMLLIFNRSSSHVPLKIL 255 (396)
Q Consensus 190 fVEFDd~-NgkIlt~~a~d~~YrVwdlknY---------s~lysIs~--~~VqEIkiSpg--~~Ll~~q~~~~~iplkIl 255 (396)
-+.|.+. +|..++..+.|+.++|||+.+. +.+..+.+ ..|..++++|+ -.+++.... ...++||
T Consensus 62 ~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--dg~v~iw 139 (351)
T 3f3f_A 62 AIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN--DGILRLY 139 (351)
T ss_dssp EEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--TCEEEEE
T ss_pred EEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC--CCcEEEe
Confidence 3577775 5889999999999999999987 66777765 78999999985 443444443 4678999
Q ss_pred EeecCcEEEE---------------------------------------------------------EEeecccCCc---
Q 016020 256 SIEDGTVLKV---------------------------------------------------------FYHLLHRNKK--- 275 (396)
Q Consensus 256 ~IetG~~l~s---------------------------------------------------------~~~~L~~sk~--- 275 (396)
|+.+++.+.. ...+-.|...
T Consensus 140 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 219 (351)
T 3f3f_A 140 DALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRS 219 (351)
T ss_dssp ECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEE
T ss_pred cCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeE
Confidence 9988764321 1111123333
Q ss_pred cchhhhhc----ceeeEeecCCeeeEEEcccc----------------------------------------------eE
Q 016020 276 VDFIEQFN----EKLLVKQENENLQILDVRNA----------------------------------------------EL 305 (396)
Q Consensus 276 i~FiE~~~----ekLLIKQed~~L~I~Dv~~~----------------------------------------------ki 305 (396)
+.|.+ .+ .+|+....|+.|++||+.++ ++
T Consensus 220 ~~~~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (351)
T 3f3f_A 220 ISWAP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL 298 (351)
T ss_dssp EEECC-CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEE
T ss_pred EEECC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccE
Confidence 67777 44 78999999999999999986 67
Q ss_pred EEecccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 306 MEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 306 ~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
+.....|...+.+.-|.+++++++|-+. |+|.+||+..
T Consensus 299 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 299 LSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 7778889999999999999999999986 9999999985
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.32 E-value=1.3e-10 Score=110.01 Aligned_cols=183 Identities=13% Similarity=0.123 Sum_probs=132.7
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCceE-------EEEe--ccCceEEEEEcC-CeEEEEEecCCCeeeeEEEEe
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-------LYSI--SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~-------lysI--s~~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~I 257 (396)
+-.+.|++.+...++....|+.++|||+.+... ...+ ....|.+|.++| +-.+++.... .-.++|||+
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~--dg~i~i~d~ 261 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD--DQKLMIWDT 261 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET--TSEEEEEET
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC--CCeEEEEEC
Confidence 346889884443888889999999999998421 2233 336799999998 5555555544 467999999
Q ss_pred ecC---cEEEEEEeecccCCc---cchhhhhcc-eeeEeecCCeeeEEEccc-ceEEEecccccCCCceEEEeecCe-EE
Q 016020 258 EDG---TVLKVFYHLLHRNKK---VDFIEQFNE-KLLVKQENENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQ-LF 328 (396)
Q Consensus 258 etG---~~l~s~~~~L~~sk~---i~FiE~~~e-kLLIKQed~~L~I~Dv~~-~ki~~v~~t~~~~PsAFiFly~~q-LF 328 (396)
.++ +.+..+. .+... +.|.+ .++ .|++...|+.|++||+++ ++.+.....|...+.+..|.++++ ++
T Consensus 262 ~~~~~~~~~~~~~---~~~~~v~~i~~~p-~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 262 RNNNTSKPSHTVD---AHTAEVNCLSFNP-YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp TCSCSSSCSEEEE---CCSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred CCCCCCcceeEee---cCCCCeEEEEeCC-CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEE
Confidence 998 4565554 45444 78887 555 577999999999999998 666777778889999999999884 67
Q ss_pred EEEEc-CeEEEEeccc---------------ceeeeeccccccCCC---CCCCc-EEEccCCcEEEEe
Q 016020 329 LTFRN-RTVAVWNFRG---------------ELVTSFEDHLLWHPD---CNTNN-IYITSDQDLIISY 376 (396)
Q Consensus 329 LTfs~-gti~iWd~~g---------------eL~t~fedh~l~~~~---c~~n~-~~it~~qd~ii~~ 376 (396)
++-+. |+|.|||++. +++..+..|--+... ++++. +++|...|=.|..
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~i 405 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQV 405 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEE
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEE
Confidence 77765 9999999987 677777766432221 55565 6666655544433
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.32 E-value=5.6e-10 Score=102.95 Aligned_cols=233 Identities=10% Similarity=0.140 Sum_probs=161.4
Q ss_pred ceEEEeec--cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhh
Q 016020 90 KVIEIVAA--RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 167 (396)
Q Consensus 90 ~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~ 167 (396)
.|..+... ..+++.-...|...+||..+++.+..+. .+...+.++-++..+..+++++ ..|. . .+..+.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~~~~--~--i~~~d~-- 241 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSN--WISE--D--ISVIDR-- 241 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEE--TTTT--E--EEEEET--
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEe--cCCC--c--EEEEEC--
Confidence 45444443 3455555667889999999999888876 4556788899998777665532 1122 2 222322
Q ss_pred hhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeec--------CCCeEEEEeccCceEEEEecc-CceEEEEEcCCe
Q 016020 168 IRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSA--------QDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGI 238 (396)
Q Consensus 168 i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a--------~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~ 238 (396)
+.|+ ++..-..-..|..+.|++ +|+.++... .|+.+++||+.+.+.+..+.. ..+..+.++|+-
T Consensus 242 -~~~~-----~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 314 (433)
T 3bws_A 242 -KTKL-----EIRKTDKIGLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTE 314 (433)
T ss_dssp -TTTE-----EEEECCCCSEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSST
T ss_pred -CCCc-----EEEEecCCCCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCC
Confidence 2222 121111123477888998 555444444 588999999999998888754 578899999765
Q ss_pred -EEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecC---------------CeeeEEEccc
Q 016020 239 -MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN---------------ENLQILDVRN 302 (396)
Q Consensus 239 -~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed---------------~~L~I~Dv~~ 302 (396)
.+++.... .-.+.+|++++|+.+..+.+. ..-..+.|.+ .+.+|++...+ +.|.+||+.+
T Consensus 315 ~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 315 NKIYVSDMC--CSKIEVYDLKEKKVQKSIPVF-DKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TEEEEEETT--TTEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CEEEEEecC--CCEEEEEECCCCcEEEEecCC-CCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 55565554 347899999999998877621 1122377777 78889988764 5899999999
Q ss_pred ceEEEecccccCCCceEEEeecCeEEEEEE--cCeEEEEeccc
Q 016020 303 AELMEVSRTEFMTPSAFIFLYENQLFLTFR--NRTVAVWNFRG 343 (396)
Q Consensus 303 ~ki~~v~~t~~~~PsAFiFly~~qLFLTfs--~gti~iWd~~g 343 (396)
++.+..... ...|.++.|.++++.+++.. +++|.+|++++
T Consensus 391 ~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 391 DTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 999887666 45789999999998766654 69999999875
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.31 E-value=2e-09 Score=93.35 Aligned_cols=176 Identities=10% Similarity=0.215 Sum_probs=128.8
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCc---eEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknY---s~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~ 264 (396)
-+.|++ +|+.++..+.|+.+++|++.+. +.+..+.+ ..|..+.+.++.++ .... ...+++|+ +++.+.
T Consensus 64 ~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~-~~~~---d~~i~~~d--~~~~~~ 136 (313)
T 3odt_A 64 SVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVI-SGSW---DKTAKVWK--EGSLVY 136 (313)
T ss_dssp EEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEE-EEET---TSEEEEEE--TTEEEE
T ss_pred EEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEE-EEeC---CCCEEEEc--CCcEEE
Confidence 467888 8899999999999999999876 45666654 88999999766443 3332 35689999 888877
Q ss_pred EEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEeccc-ccCCCceEEEeecCeEEEEEEcCeEEEEe
Q 016020 265 VFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT-EFMTPSAFIFLYENQLFLTFRNRTVAVWN 340 (396)
Q Consensus 265 s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t-~~~~PsAFiFly~~qLFLTfs~gti~iWd 340 (396)
.+. .+... +.|.+..+++|++...|+.|++|| .++....... +...+.+..|.++++++..-.+|+|.+||
T Consensus 137 ~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d 211 (313)
T 3odt_A 137 NLQ---AHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVD 211 (313)
T ss_dssp EEE---CCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEE
T ss_pred ecc---cCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEE
Confidence 776 44444 678887899999999999999999 4444554444 88889999999999955555559999999
Q ss_pred ccc-ceeeeeccccccCCC---CCCCcEEEccCCcEEEEecc
Q 016020 341 FRG-ELVTSFEDHLLWHPD---CNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 341 ~~g-eL~t~fedh~l~~~~---c~~n~~~it~~qd~ii~~~~ 378 (396)
++. +++..+..|...... .+++. +++...|=.|....
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd 252 (313)
T 3odt_A 212 MHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWS 252 (313)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEEC
T ss_pred CCchhhhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEE
Confidence 985 788888877543221 45553 55555554444443
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.31 E-value=5.6e-10 Score=102.93 Aligned_cols=236 Identities=11% Similarity=0.097 Sum_probs=160.2
Q ss_pred chhhhhhccccceeeeccccceEEEecC----CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCC
Q 016020 99 DIVFALAHSGVCAAFSRETNRRICFLNV----SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPD 174 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~~ic~lN~----s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~ 174 (396)
.++++-...|....||..+|+.+..+.. .+...|.++-++..+. ++. +. +.+ ..++.-. +..
T Consensus 135 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~-s~--~~d-~~v~~~d-----~~~---- 200 (433)
T 3bws_A 135 RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE-LWV-SQ--MQA-NAVHVFD-----LKT---- 200 (433)
T ss_dssp EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-EEE-EE--GGG-TEEEEEE-----TTT----
T ss_pred eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-EEE-EE--CCC-CEEEEEE-----CCC----
Confidence 3455555667788999998988865443 4566788888865443 333 22 122 2222222 122
Q ss_pred CCCcceee-cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCe-EEEEEecCC----
Q 016020 175 SGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGI-MLLIFNRSS---- 247 (396)
Q Consensus 175 ~~~~LF~~-~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~-~Ll~~q~~~---- 247 (396)
+.++..- ..-..|..+.|++.+..+++.+..++.+++||+++.+.+..+.. ..+..+.++|+- .|++.....
T Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 201 -LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp -CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred -ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccc
Confidence 2222211 22346778899995555657777899999999999999998876 679999999764 444443322
Q ss_pred -CeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEe-ecCCeeeEEEcccceEEEecccccCCCceEEEeecC
Q 016020 248 -SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN 325 (396)
Q Consensus 248 -~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~ 325 (396)
..-.+++||+.+|+.+..+.+. ..-..+.|.+ .+++|++- ..++.+++||+.++++..... +...|.+..|.+++
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg 356 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTIGPP-GNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDG 356 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEE-ECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTS
T ss_pred cCCCeEEEEECCCCcEEeeccCC-CCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCC
Confidence 2458999999999988876532 2223477777 67667655 789999999999999887654 56778999999998
Q ss_pred eEEEEEEc----------------CeEEEEeccc-ceeeeeccc
Q 016020 326 QLFLTFRN----------------RTVAVWNFRG-ELVTSFEDH 352 (396)
Q Consensus 326 qLFLTfs~----------------gti~iWd~~g-eL~t~fedh 352 (396)
+.+++... |.|.+||... +++..++.+
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~ 400 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG 400 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC
Confidence 75444443 5999999965 777777654
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.30 E-value=6.1e-11 Score=112.37 Aligned_cols=242 Identities=13% Similarity=0.151 Sum_probs=167.3
Q ss_pred ccceEEEeecc---chhhhhhccccceeeeccc----------cceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCC
Q 016020 88 RTKVIEIVAAR---DIVFALAHSGVCAAFSRET----------NRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDN 154 (396)
Q Consensus 88 RS~V~EIv~a~---dii~~L~~sG~c~af~~~t----------~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~ 154 (396)
...|.-|-+.. .++++-...|...+|+..+ .+.+..+.....+ |.+|=++..+..++.++ ..|.
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~s~--~~dg 204 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKE-GYGLSWNPNLNGYLLSA--SDDH 204 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSC-CCCEEECTTSTTEEEEE--CTTS
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCC-eEEEEeCCCCCCeEEEE--eCCC
Confidence 34455555542 4677777889999999877 5667777655444 56677776666344422 2232
Q ss_pred CceeeeEeeehhhhhhCCCCCCCccee--ecccCC---CCeEEeeCCCCcEEEeecCCCeEEEEeccCc---eEEEEec-
Q 016020 155 FSSLKCRSTKIEYIRRGKPDSGFALFE--SESLKW---PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSIS- 225 (396)
Q Consensus 155 ~s~L~cr~~~~~~i~~gk~~~~~~LF~--~~~l~~---PgfVEFDd~NgkIlt~~a~d~~YrVwdlknY---s~lysIs- 225 (396)
.++..+++ .++. +..... .....| .--+.|++.++.+++..+.|+.+++||+++. +.+..+.
T Consensus 205 ----~i~vwd~~---~~~~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 205 ----TICLWDIN---ATPK--EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp ----CEEEEETT---SCCB--GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred ----eEEEEeCC---CCCC--CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 22333222 2111 000100 001123 2347788888999999999999999999987 4555554
Q ss_pred -cCceEEEEEcCCe-EEEEEecCCCeeeeEEEEeec-CcEEEEEEeecccCCc---cchhhhhcc-eeeEeecCCeeeEE
Q 016020 226 -DKHVQEIKISPGI-MLLIFNRSSSHVPLKILSIED-GTVLKVFYHLLHRNKK---VDFIEQFNE-KLLVKQENENLQIL 298 (396)
Q Consensus 226 -~~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~Iet-G~~l~s~~~~L~~sk~---i~FiE~~~e-kLLIKQed~~L~I~ 298 (396)
...|..|.++|.- .+++.... ...++|||+.+ ++.+..+. .|... ++|.+ .++ .|++...|+.|+||
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~--dg~v~vwd~~~~~~~~~~~~---~h~~~v~~i~~sp-~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSA--DKTVALWDLRNLKLKLHSFE---SHKDEIFQVQWSP-HNETILASSGTDRRLHVW 349 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCTTSCSEEEE---CCSSCEEEEEECS-SCTTEEEEEETTSCCEEE
T ss_pred CCCCeEEEEeCCCCCCEEEEEeC--CCeEEEEeCCCCCCCeEEee---cCCCCEEEEEECC-CCCCEEEEEeCCCcEEEE
Confidence 3789999999854 35555555 35699999998 56677776 34444 78887 554 58888899999999
Q ss_pred Eccc--------------ceEEEecccccCCCceEEEeecCe-EEEEEEc-CeEEEEecccceee
Q 016020 299 DVRN--------------AELMEVSRTEFMTPSAFIFLYENQ-LFLTFRN-RTVAVWNFRGELVT 347 (396)
Q Consensus 299 Dv~~--------------~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs~-gti~iWd~~geL~t 347 (396)
|+.+ .+++.+..+|...+.++.|.++++ ++++.+. |+|.||+++..+..
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccccc
Confidence 9998 478888889999999999999999 8888887 99999999886554
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.8e-10 Score=109.27 Aligned_cols=205 Identities=12% Similarity=0.089 Sum_probs=141.4
Q ss_pred eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceee-cccCCCCeEEeeCCCCcEEEeecCCCe
Q 016020 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSI 209 (396)
Q Consensus 131 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~-~~l~~PgfVEFDd~NgkIlt~~a~d~~ 209 (396)
-|.++=++..+..|+.++ ..|. .++.-.+... .|+ ....+.. ..-..+--+.|++ +|+.|+....++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~--~~dg--~v~iwd~~~~---~~~---~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~ 172 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACA--DSDK--SLLVFDVDKT---SKN---VLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGD 172 (450)
T ss_dssp CEEEEEECTTSSEEEEEE--GGGT--EEEEEEECSS---SSS---CEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred ceEEEEEcCCCCEEEEEE--CCCC--eEEEEECcCC---CCc---eeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCc
Confidence 488998888777664422 2232 2333222100 111 1112221 1123345789998 7888888888999
Q ss_pred EEEEeccCceEEE----Ee--ccCceEEEEEcCC---eEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCc---cc
Q 016020 210 YKVFDLKNYTMLY----SI--SDKHVQEIKISPG---IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKK---VD 277 (396)
Q Consensus 210 YrVwdlknYs~ly----sI--s~~~VqEIkiSpg---~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~---i~ 277 (396)
+++||+.+.+... .+ ....|..+.++|+ -.+++.... ...++||++.+|+.+..+. ..|... +.
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~--~~h~~~v~~~~ 248 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--DEHIKISHYPQCFIVDKWL--FGHKHFVSSIC 248 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--TSCEEEEEESCTTCEEEEC--CCCSSCEEEEE
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--CCcEEEEECCCCceeeeee--cCCCCceEEEE
Confidence 9999999887432 33 3378999999997 555555555 4678999999999887643 245444 78
Q ss_pred hhhhhcceeeEeecCCeeeEEEcccceEEEeccc-------------------------ccCCCceEEEeecCeEEEEEE
Q 016020 278 FIEQFNEKLLVKQENENLQILDVRNAELMEVSRT-------------------------EFMTPSAFIFLYENQLFLTFR 332 (396)
Q Consensus 278 FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t-------------------------~~~~PsAFiFly~~qLFLTfs 332 (396)
|. .+.+|+....|+.|++||+.+++++..... ....+.+..|.++++++++.+
T Consensus 249 ~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 249 CG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 88 899999999999999999999998776542 235567888999998888876
Q ss_pred --cCeEEEEec--c-c---ceeeeeccc
Q 016020 333 --NRTVAVWNF--R-G---ELVTSFEDH 352 (396)
Q Consensus 333 --~gti~iWd~--~-g---eL~t~fedh 352 (396)
+++|.+||+ . + +++..+..|
T Consensus 327 ~~d~~i~iw~~~~~~~~~l~~~~~~~~~ 354 (450)
T 2vdu_B 327 EATKCIIILEMSEKQKGDLALKQIITFP 354 (450)
T ss_dssp TTCSEEEEEEECSSSTTCEEEEEEEECS
T ss_pred CCCCeEEEEEeccCCCCceeeccEeccC
Confidence 499999999 3 3 455566655
No 112
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.29 E-value=4.5e-10 Score=105.51 Aligned_cols=258 Identities=12% Similarity=0.139 Sum_probs=175.7
Q ss_pred hhhhccccceeeeccccceEEEecC-CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcce
Q 016020 102 FALAHSGVCAAFSRETNRRICFLNV-SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALF 180 (396)
Q Consensus 102 ~~L~~sG~c~af~~~t~~~ic~lN~-s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF 180 (396)
+|.+--|....||..||+.+-.+.. .+..-|.||=++....-|++.| .|. .++.- ++..| .++.
T Consensus 119 lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs---~Dg--~v~iW-----d~~~~-----~~~~ 183 (420)
T 4gga_A 119 LAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---SSA--EVQLW-----DVQQQ-----KRLR 183 (420)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---TTS--CEEEE-----ETTTT-----EEEE
T ss_pred EEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE---CCC--eEEEE-----EcCCC-----cEEE
Confidence 3444567889999999998877764 4567899999998777666533 232 22222 12222 2222
Q ss_pred eecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce-EEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEe
Q 016020 181 ESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 181 ~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs-~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~I 257 (396)
.- -.|.+-+---..|+.+++..+.|+.+++||..... .+..+.+ ..+..+.++|.-..++.... +-.++||++
T Consensus 184 ~~--~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~--D~~v~i~~~ 259 (420)
T 4gga_A 184 NM--TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN--DNLVNVWPS 259 (420)
T ss_dssp EE--CCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET--TSCEEEEES
T ss_pred EE--eCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeec--cccceEEee
Confidence 11 12333332222368899999999999999998755 4555554 88999999987776666665 567899999
Q ss_pred ecCcEEEE-EEeecccCCc---cchhhhhcceeeE--eecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEE
Q 016020 258 EDGTVLKV-FYHLLHRNKK---VDFIEQFNEKLLV--KQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTF 331 (396)
Q Consensus 258 etG~~l~s-~~~~L~~sk~---i~FiE~~~ekLLI--KQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTf 331 (396)
.+|+.... +.....+... +.|.+.....+++ +..|+.|++||+.++++.....++ ..+.+..|.++++.+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISG 338 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEE
Confidence 99875432 1111233333 6777755555554 458999999999999999877665 467788888888777766
Q ss_pred E---cCeEEEEeccc-ceeeeeccccccCCC---CCCCcEEEccCCcEEEEeccC
Q 016020 332 R---NRTVAVWNFRG-ELVTSFEDHLLWHPD---CNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 332 s---~gti~iWd~~g-eL~t~fedh~l~~~~---c~~n~~~it~~qd~ii~~~~~ 379 (396)
+ +|+|.|||... +++..|.+|.-.+.. .|++++++|+..|=-|-.-+.
T Consensus 339 sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred EecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 4 59999999976 899999998655432 678888888777755554443
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.28 E-value=7.1e-11 Score=111.99 Aligned_cols=157 Identities=14% Similarity=0.175 Sum_probs=123.6
Q ss_pred eEEeeCCCCcEE-EeecCCCeEEEEecc--CceEEEEec----cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcE
Q 016020 190 FVEFDDVNGKVL-TYSAQDSIYKVFDLK--NYTMLYSIS----DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 190 fVEFDd~NgkIl-t~~a~d~~YrVwdlk--nYs~lysIs----~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
-+.|++ +|+.| +..+.|+.++|||+. +.+.+..+. ...|..+.++|+-..|+.... ..-+.+|++.+++.
T Consensus 107 ~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 107 NLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK--FGDVYSIDINSIPE 183 (450)
T ss_dssp EEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET--TSEEEEEETTSCCC
T ss_pred EEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC--CCcEEEEecCCccc
Confidence 467888 67765 778889999999999 888888875 278999999987655555544 45579999999886
Q ss_pred EE-EEEeecccCCc---cchhhhh---cceeeEeecCCeeeEEEcccceEEEe-cccccCCCceEEEeecCeEEEEEEc-
Q 016020 263 LK-VFYHLLHRNKK---VDFIEQF---NEKLLVKQENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFRN- 333 (396)
Q Consensus 263 l~-s~~~~L~~sk~---i~FiE~~---~ekLLIKQed~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~qLFLTfs~- 333 (396)
.. ....+..|... +.|.+ . +.+|+....|+.|+|||+.+++++.. ..+|...+.+..|. +++++++-+.
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred ccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 54 11122245444 67777 5 77999999999999999999988776 77888999999999 9999888886
Q ss_pred CeEEEEeccc-ceeeeecc
Q 016020 334 RTVAVWNFRG-ELVTSFED 351 (396)
Q Consensus 334 gti~iWd~~g-eL~t~fed 351 (396)
++|.+||++. +++..+.-
T Consensus 262 ~~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp SEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECCCCcEeeeecc
Confidence 8999999886 66666653
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1e-09 Score=113.07 Aligned_cols=193 Identities=12% Similarity=0.116 Sum_probs=141.4
Q ss_pred eEEeeCC-CCcEEEeecCCCeEEEEeccCce--EEEEecc--CceEEEEEcCC--eEEEEEecCCCeeeeEEEEeecCcE
Q 016020 190 FVEFDDV-NGKVLTYSAQDSIYKVFDLKNYT--MLYSISD--KHVQEIKISPG--IMLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 190 fVEFDd~-NgkIlt~~a~d~~YrVwdlknYs--~lysIs~--~~VqEIkiSpg--~~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
-+.|.+. +|..++..+.|+.++|||+.+.+ .+..+.. ..|..+.++|+ -.+++.... ...++||++.+++.
T Consensus 58 ~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~--dg~I~vwdl~~~~~ 135 (753)
T 3jro_A 58 RVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS--DGKVSVVEFKENGT 135 (753)
T ss_dssp EEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--TSEEEEEECCSSSC
T ss_pred EEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC--CCcEEEEEeecCCC
Confidence 3567653 48899999999999999999987 6666654 88999999985 333444444 46899999999955
Q ss_pred EEEEEeecccCCc---cchhhh------------hcceeeEeecCCeeeEEEcccc----eEEEecccccCCCceEEEee
Q 016020 263 LKVFYHLLHRNKK---VDFIEQ------------FNEKLLVKQENENLQILDVRNA----ELMEVSRTEFMTPSAFIFLY 323 (396)
Q Consensus 263 l~s~~~~L~~sk~---i~FiE~------------~~ekLLIKQed~~L~I~Dv~~~----ki~~v~~t~~~~PsAFiFly 323 (396)
....... .+... +.|.+. .+.+|++...|+.|++||+.++ ++......|...+.+..|.+
T Consensus 136 ~~~~~~~-~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 136 TSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp CCCEEEE-CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred cceeEee-cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc
Confidence 4433322 33333 667664 5899999999999999999987 66777788999999999999
Q ss_pred c---CeEEEEEEc-CeEEEEecccc------eeeeeccccccC---CCCCCCcEEEccCCcEEEEeccCCCCCcc
Q 016020 324 E---NQLFLTFRN-RTVAVWNFRGE------LVTSFEDHLLWH---PDCNTNNIYITSDQDLIISYCKAEPEDQW 385 (396)
Q Consensus 324 ~---~qLFLTfs~-gti~iWd~~ge------L~t~fedh~l~~---~~c~~n~~~it~~qd~ii~~~~~~~~~~~ 385 (396)
+ ++++++.+. |+|.+||.+.. .......|.-+. ...+++++++|+..|=-|...+......|
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~ 289 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 289 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCC
T ss_pred CCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCc
Confidence 9 899988886 89999999873 222222233222 22577888888777766666666544444
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.25 E-value=2.2e-10 Score=101.31 Aligned_cols=230 Identities=15% Similarity=0.038 Sum_probs=150.1
Q ss_pred CCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCc-EEEee
Q 016020 126 VSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGK-VLTYS 204 (396)
Q Consensus 126 ~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~Ngk-Ilt~~ 204 (396)
..+.+.|.++-++....-|++.| .| ..++.-.+. .++... .+......-...--+.|++ +|+ .++..
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~---~d--~~v~iw~~~-----~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~l~~~ 75 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITS---WD--GSLTVYKFD-----IQAKNV-DLLQSLRYKHPLLCCNFID-NTDLQIYVG 75 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEE---TT--SEEEEEEEE-----TTTTEE-EEEEEEECSSCEEEEEEEE-SSSEEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEc---CC--CeEEEEEeC-----CCCccc-cceeeeecCCceEEEEECC-CCCcEEEEE
Confidence 35667888888887666565533 22 234333332 111000 0111111112233577887 688 88888
Q ss_pred cCCCeEEEEec-cCceEEEEec----cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeec---------CcEEEEEEeec
Q 016020 205 AQDSIYKVFDL-KNYTMLYSIS----DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIED---------GTVLKVFYHLL 270 (396)
Q Consensus 205 a~d~~YrVwdl-knYs~lysIs----~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~Iet---------G~~l~s~~~~L 270 (396)
..|+.+++||+ .+.+. ..+. ...|..+.++|+-+|+... . ...+++|++.+ ++.+..+.
T Consensus 76 ~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~--- 148 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAAS-W--DGLIEVIDPRNYGDGVIAVKNLNSNNTK--- 148 (342)
T ss_dssp ETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEE-T--TSEEEEECHHHHTTBCEEEEESCSSSSS---
T ss_pred cCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEc-C--CCeEEEEcccccccccccccCCeeeEEe---
Confidence 89999999999 77764 4443 3789999999965554443 3 46789999998 77665443
Q ss_pred ccCCc---cchhhhhcceeeEeecCCeeeEEEccc-ce--EEEecccccCCCceEEEee-cCeEEEEEEc-CeEEEEecc
Q 016020 271 HRNKK---VDFIEQFNEKLLVKQENENLQILDVRN-AE--LMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-RTVAVWNFR 342 (396)
Q Consensus 271 ~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~-~k--i~~v~~t~~~~PsAFiFly-~~qLFLTfs~-gti~iWd~~ 342 (396)
+... ++|. .+.|++...++.|++||+.+ ++ .......+...+.+..|.+ +++++++-+. |.|.+||++
T Consensus 149 -~~~~v~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 149 -VKNKIFTMDTN---SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp -SCCCEEEEEEC---SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred -eCCceEEEEec---CCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 3333 5554 44599999999999999998 43 4455667788899999999 8888888887 899999987
Q ss_pred c-------ceeeeeccccc---------cC---CCCCCCcEEEccCCcEEEEecc
Q 016020 343 G-------ELVTSFEDHLL---------WH---PDCNTNNIYITSDQDLIISYCK 378 (396)
Q Consensus 343 g-------eL~t~fedh~l---------~~---~~c~~n~~~it~~qd~ii~~~~ 378 (396)
. +.+..|..|.. +. ...+++++++|...|=-|...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 5 45667777743 11 1255667667666664333333
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.24 E-value=1.7e-10 Score=118.88 Aligned_cols=186 Identities=16% Similarity=0.228 Sum_probs=135.6
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEecc--CceEEEEecc--CceEEEEEcCC--eEEEEEecCCCeeeeEEEEeecCcEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSISD--KHVQEIKISPG--IMLLIFNRSSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlk--nYs~lysIs~--~~VqEIkiSpg--~~Ll~~q~~~~~iplkIl~IetG~~l~ 264 (396)
+.|++ +|+.++....|+.++|||+. +...+..+.+ ..|..+.++|. -.+++.... +..++||++.+|+...
T Consensus 15 l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~--Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 15 AVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQ 91 (753)
T ss_dssp ECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET--TSCEEEEEEETTEEEE
T ss_pred EEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC--CCeEEEEECCCCcccc
Confidence 45666 68888888899999999999 6677888875 78999999864 334444444 4679999999997333
Q ss_pred EEEeecccCCc---cchhhhh-cceeeEeecCCeeeEEEcccce--EEEecccccCCCceEEEee-------------cC
Q 016020 265 VFYHLLHRNKK---VDFIEQF-NEKLLVKQENENLQILDVRNAE--LMEVSRTEFMTPSAFIFLY-------------EN 325 (396)
Q Consensus 265 s~~~~L~~sk~---i~FiE~~-~ekLLIKQed~~L~I~Dv~~~k--i~~v~~t~~~~PsAFiFly-------------~~ 325 (396)
...+ -.+... +.|.+.. +..|++...|+.+++||+.+++ .......+.....+..|.+ ++
T Consensus 92 ~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~ 170 (753)
T 3jro_A 92 IAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (753)
T ss_dssp EEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGG
T ss_pred cccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCC
Confidence 2221 144444 7777733 8899999999999999999873 3335567888889999998 47
Q ss_pred eEEEEEEc-CeEEEEeccc-----ceeeeeccccccCCC---CCC---CcEEEccCCcEEEEeccCC
Q 016020 326 QLFLTFRN-RTVAVWNFRG-----ELVTSFEDHLLWHPD---CNT---NNIYITSDQDLIISYCKAE 380 (396)
Q Consensus 326 qLFLTfs~-gti~iWd~~g-----eL~t~fedh~l~~~~---c~~---n~~~it~~qd~ii~~~~~~ 380 (396)
+++++-+. |+|.+||++. .++..+..|--.... +|+ +++++|...|=.|......
T Consensus 171 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 171 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 77777775 9999999986 355677777443222 566 7888888877555444433
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.24 E-value=2.1e-10 Score=101.21 Aligned_cols=116 Identities=10% Similarity=0.156 Sum_probs=88.7
Q ss_pred eEEeeCCC--CcEEEeecCCCeEEEEeccC-ceEE-EEec--cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 190 FVEFDDVN--GKVLTYSAQDSIYKVFDLKN-YTML-YSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 190 fVEFDd~N--gkIlt~~a~d~~YrVwdlkn-Ys~l-ysIs--~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
-+.|++.+ |+.++....|+.++|||+.+ ...+ ..+. ...|..+.++|+--+|+.... ...++||++++|+.+
T Consensus 44 ~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 44 CLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC--DKTAKMWDLSSNQAI 121 (368)
T ss_dssp EEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEE
T ss_pred EEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC--CCcEEEEEcCCCCce
Confidence 46788855 89999999999999999997 4443 4554 488999999987655555554 468899999999987
Q ss_pred EEEEeecccCCc---cchh-hhhcceeeEeecCCeeeEEEcccceEEEeccc
Q 016020 264 KVFYHLLHRNKK---VDFI-EQFNEKLLVKQENENLQILDVRNAELMEVSRT 311 (396)
Q Consensus 264 ~s~~~~L~~sk~---i~Fi-E~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t 311 (396)
.... +... +.|. ...+.+|++...|+.|++||+.+++.+.....
T Consensus 122 ~~~~----~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 169 (368)
T 3mmy_A 122 QIAQ----HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL 169 (368)
T ss_dssp EEEE----CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC
T ss_pred eecc----ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec
Confidence 6433 4444 6663 23677899999999999999999887665443
No 118
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.23 E-value=6.1e-11 Score=119.57 Aligned_cols=177 Identities=6% Similarity=0.049 Sum_probs=127.7
Q ss_pred eEEeeCC-----CCcEEEeecCCCeEEEEeccCceE-----------EEEe--ccCceEEEEEcCCeEEEEEecCCCeee
Q 016020 190 FVEFDDV-----NGKVLTYSAQDSIYKVFDLKNYTM-----------LYSI--SDKHVQEIKISPGIMLLIFNRSSSHVP 251 (396)
Q Consensus 190 fVEFDd~-----NgkIlt~~a~d~~YrVwdlknYs~-----------lysI--s~~~VqEIkiSpg~~Ll~~q~~~~~ip 251 (396)
-+.|.+. +|..||..+.|+++||||+.+.+. ...+ ....|..+.++|+-.| +.... +..
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~l-asgs~--Dgt 288 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTV-VCGFK--NGF 288 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEE-EEEET--TSE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeE-EEEeC--CCE
Confidence 3678774 478999999999999999987632 1233 3378999999987654 44444 578
Q ss_pred eEEEEeecCcE-EEEEEeecccCCccch----hhhhc-ceeeEeecCCeeeEEEcccceEEEecccccC--CCceEEEee
Q 016020 252 LKILSIEDGTV-LKVFYHLLHRNKKVDF----IEQFN-EKLLVKQENENLQILDVRNAELMEVSRTEFM--TPSAFIFLY 323 (396)
Q Consensus 252 lkIl~IetG~~-l~s~~~~L~~sk~i~F----iE~~~-ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~--~PsAFiFly 323 (396)
++|||+++|+. ...+. .|+..|.= ....+ ..|+....|+.++|||++++++..+..++.. ...+.-|.+
T Consensus 289 V~lWD~~~~~~~~~~~~---~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQ---VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp EEEEETTBCSSCSEEEE---CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred EEEEECCCCCCceEEee---cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 99999999854 33344 56666432 23355 6789999999999999999887665555543 357788999
Q ss_pred cCeEEEEEEc-CeEEEEeccc-ceeeeeccccccCC---CCCCCcEEEccCCcE
Q 016020 324 ENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHLLWHP---DCNTNNIYITSDQDL 372 (396)
Q Consensus 324 ~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~l~~~---~c~~n~~~it~~qd~ 372 (396)
+++.|++-++ ++|++||.+. ..+.++.+|.-++. .+|+++.++|+..|=
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTT
T ss_pred CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCC
Confidence 9999888776 7999999886 56666777764432 266777666665553
No 119
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.21 E-value=1.4e-08 Score=90.28 Aligned_cols=232 Identities=15% Similarity=0.152 Sum_probs=153.4
Q ss_pred hhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcce
Q 016020 101 VFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALF 180 (396)
Q Consensus 101 i~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF 180 (396)
+++-...|.-.+||..||+.+-.+....... ++-++...+.+++++. .++ +.+..+ +..|++ +.-
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~--~~~----~i~~~d---~~~~~~----~~~ 77 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLGYDFV--DTAITSDCSNVVVTSD--FCQ----TLVQIE---TQLEPP----KVV 77 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCCCEE--EEEECSSSCEEEEEES--TTC----EEEEEE---CSSSSC----EEE
T ss_pred EEEecCCCeEEEEeCcccceeeeEEccCCcc--eEEEcCCCCEEEEEeC--CCC----eEEEEE---CCCCce----eEE
Confidence 4444567888999999999988877554444 7888877776665332 122 222232 222221 133
Q ss_pred eecccCCCCe-EEeeCCCCcEEEeecCC-C--eEEEEeccCceEEEEecc-CceEEEEEcCCe-EEEEEecCCCeee-eE
Q 016020 181 ESESLKWPGF-VEFDDVNGKVLTYSAQD-S--IYKVFDLKNYTMLYSISD-KHVQEIKISPGI-MLLIFNRSSSHVP-LK 253 (396)
Q Consensus 181 ~~~~l~~Pgf-VEFDd~NgkIlt~~a~d-~--~YrVwdlknYs~lysIs~-~~VqEIkiSpg~-~Ll~~q~~~~~ip-lk 253 (396)
....-..|-. +.|++ +|+.++....+ + .++|||+.+.+.+-.+.. .....+.+||+- .|++.... .-. +.
T Consensus 78 ~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~~i~ 154 (331)
T 3u4y_A 78 AIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS--SANTVR 154 (331)
T ss_dssp EEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET--TTTEEE
T ss_pred ecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC--CCceEE
Confidence 3334467888 99999 66655544444 3 999999999998888876 778999999874 34444433 124 78
Q ss_pred EEEeecCcEEEEE-EeecccCC---ccchhhhhcceeeEee-cCCeeeEEEcccceE---EEecccccCCCceEEEeecC
Q 016020 254 ILSIEDGTVLKVF-YHLLHRNK---KVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL---MEVSRTEFMTPSAFIFLYEN 325 (396)
Q Consensus 254 Il~IetG~~l~s~-~~~L~~sk---~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki---~~v~~t~~~~PsAFiFly~~ 325 (396)
+|++..+..+... ...+.... .+.|.+ .+++|++-. .+..|.+||+.+++. +...+. ...|....|.+++
T Consensus 155 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg 232 (331)
T 3u4y_A 155 RFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDG 232 (331)
T ss_dssp EEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTS
T ss_pred EEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCC
Confidence 8998876555433 11222222 277777 788777655 678999999999887 554443 4788999999999
Q ss_pred e-EEEEEE-cCeEEEEeccc-ce--eeeeccc
Q 016020 326 Q-LFLTFR-NRTVAVWNFRG-EL--VTSFEDH 352 (396)
Q Consensus 326 q-LFLTfs-~gti~iWd~~g-eL--~t~fedh 352 (396)
+ ||++-. ++.|.+||... ++ +..+..+
T Consensus 233 ~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 233 STVYVLTESTVDVFNFNQLSGTLSFVKSFGHG 264 (331)
T ss_dssp SEEEEECSSEEEEEEEETTTTEEEEEEEEECC
T ss_pred CEEEEEEcCCCEEEEEECCCCceeeecccccc
Confidence 8 666655 37999999985 55 5555555
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.21 E-value=8.8e-10 Score=102.34 Aligned_cols=212 Identities=8% Similarity=0.045 Sum_probs=136.1
Q ss_pred hhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcc
Q 016020 100 IVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFAL 179 (396)
Q Consensus 100 ii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~L 179 (396)
++++-...|+ ..|+..+++.+.......-.++. +...++.+.+++ ..|. ..+.- +++.|+ ++
T Consensus 33 ~la~g~~~~~-~iw~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~d~----~v~iW---d~~~~~-----~~ 94 (355)
T 3vu4_A 33 CLILSTLKSF-EIYNVHPVAHIMSQEMRHLSKVR---MLHRTNYVAFVT--GVKE----VVHIW---DDVKKQ-----DV 94 (355)
T ss_dssp EEEEECSSEE-EEEEETTEEEEEEEECSCCCEEE---ECTTSSEEEEEC--SSTT----EEEEE---ETTTTE-----EE
T ss_pred EEEEEcCCEE-EEEecCCcceeeeeecCCeEEEE---EcCCCCEEEEEE--CCcc----EEEEE---ECCCCc-----EE
Confidence 3444445555 58888777776665543322222 223344444422 2232 22222 223322 23
Q ss_pred eeecccCCCC---eEEeeCCCCcEEEeecCCCeEEEEeccCc-eEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEE
Q 016020 180 FESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNY-TMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKIL 255 (396)
Q Consensus 180 F~~~~l~~Pg---fVEFDd~NgkIlt~~a~d~~YrVwdlknY-s~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl 255 (396)
.+ +.+++ -+.|++ ++.++ +.|+.++|||+.+. +.+.++.. ...-..++++.+++.... ....++||
T Consensus 95 ~~---~~~~~~v~~v~~~~-~~~~~---~~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~~~la~~sg~--~~g~v~iw 164 (355)
T 3vu4_A 95 SR---IKVDAPVKDLFLSR-EFIVV---SYGDVISVFKFGNPWKRITDDIR-FGGVCEFSNGLLVYSNEF--NLGQIHIT 164 (355)
T ss_dssp EE---EECSSCEEEEEECS-SEEEE---EETTEEEEEESSTTCCBSSCCEE-EEEEEEEETTEEEEEESS--CTTCEEEE
T ss_pred EE---EECCCceEEEEEcC-CEEEE---EEcCEEEEEECCCCceeeEEecc-CCceEEEEccEEEEeCCC--cCcEEEEE
Confidence 22 12333 345655 33333 34789999999999 77766665 555566777443322133 35678999
Q ss_pred EeecCcE----------------EEEEEeecccCCc---cchhhhhcceeeEeecCCe-eeEEEcccceEEEecc-c-cc
Q 016020 256 SIEDGTV----------------LKVFYHLLHRNKK---VDFIEQFNEKLLVKQENEN-LQILDVRNAELMEVSR-T-EF 313 (396)
Q Consensus 256 ~IetG~~----------------l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~-L~I~Dv~~~ki~~v~~-t-~~ 313 (396)
|+.+|+. +..+. .|... +.|.+ .+.+|+....|+. ++|||+.+++++.... + |.
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~---~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIK---AHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp ECCC------------------CCEEEC---CCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred ECCCCCccccccccccccccCcccEEEE---ccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 9999872 33333 66666 78888 8999999999998 9999999999988776 4 88
Q ss_pred CCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 314 MTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 314 ~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
....+.-|.++++++++-+. ++|.+||++.
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 89999999999999999988 8999999975
No 121
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.20 E-value=3.4e-09 Score=92.88 Aligned_cols=254 Identities=10% Similarity=0.057 Sum_probs=159.5
Q ss_pred chhhhhhccccceeeeccccceEEEecCCCCc-eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 99 DIVFALAHSGVCAAFSRETNRRICFLNVSPDE-VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~e-vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
+++++-...|.-.++|..|++.+-.+...... -++++-++...+.+++++ +++ ..+ ...+ +..|+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---~~~-~~v--~~~d---~~~~~----- 67 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---NKS-ESL--VKID---LVTGE----- 67 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---TTT-TEE--EEEE---TTTCC-----
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---CCC-CeE--EEEE---CCCCC-----
Confidence 45555667888899999999998877654322 256677776665555432 111 122 2222 12222
Q ss_pred cce--eecc----cCCCCeEEeeCCCCcEEEeec------------CCCeEEEEeccCceEEEEecc-CceEEEEEcCCe
Q 016020 178 ALF--ESES----LKWPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGI 238 (396)
Q Consensus 178 ~LF--~~~~----l~~PgfVEFDd~NgkIlt~~a------------~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~ 238 (396)
.+- .... -..|.-+.|++ +|+.+.... .++.+.+||+.+.+.+..+.. ..+..+.+||+-
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg 146 (337)
T 1pby_B 68 TLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG 146 (337)
T ss_dssp EEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTS
T ss_pred eEeeEEcCCcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCC
Confidence 221 1111 12688899998 665554443 579999999999998887764 678899999654
Q ss_pred -EEEEEecCCCeeeeEEEEeecCcEEEEEEeeccc-CCccchhhhhcceeeEeecCC-----------------------
Q 016020 239 -MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR-NKKVDFIEQFNEKLLVKQENE----------------------- 293 (396)
Q Consensus 239 -~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~-sk~i~FiE~~~ekLLIKQed~----------------------- 293 (396)
.|++.. -.+.+||+++|+.+..+.. +. ...+.|.+ .+.+|++..++.
T Consensus 147 ~~l~~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (337)
T 1pby_B 147 SKLYGLG-----RDLHVMDPEAGTLVEDKPI--QSWEAETYAQP-DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218 (337)
T ss_dssp SCEEEES-----SSEEEEETTTTEEEEEECS--TTTTTTTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred CEEEEeC-----CeEEEEECCCCcEeeeeec--cccCCCceeCC-CccEEeeeccCCCceeeeeeccccccccccccccc
Confidence 344441 3489999999998877652 22 24566655 777777665443
Q ss_pred -eeeEEEcccceEEEe-cccccCCCceEEEeecCeEEEEEEcCeEEEEeccc-ceeeeeccc-cccC-CCCCCCc-EEEc
Q 016020 294 -NLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-ELVTSFEDH-LLWH-PDCNTNN-IYIT 367 (396)
Q Consensus 294 -~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g-eL~t~fedh-~l~~-~~c~~n~-~~it 367 (396)
.|.+||+.++++..+ ...+...|.+..|.++++.+++. ++.|.+||... +++..++.+ .++. ...++++ +|++
T Consensus 219 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 219 TGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred cceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE
Confidence 468999999988632 22344567888999988765544 89999999986 666665532 2221 1144554 5555
Q ss_pred cCCcEEEEe
Q 016020 368 SDQDLIISY 376 (396)
Q Consensus 368 ~~qd~ii~~ 376 (396)
....-|..|
T Consensus 298 ~~~~~i~v~ 306 (337)
T 1pby_B 298 GALGDLAAY 306 (337)
T ss_dssp SBSSEEEEE
T ss_pred cCCCcEEEE
Confidence 443333333
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.19 E-value=2.5e-10 Score=107.44 Aligned_cols=176 Identities=8% Similarity=-0.041 Sum_probs=109.1
Q ss_pred CCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCC-eEEEEEecCCCeeeeEEEEeecCcEEEEEEee----
Q 016020 197 NGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIEDGTVLKVFYHL---- 269 (396)
Q Consensus 197 NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg-~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~---- 269 (396)
.|++||..+.|+++||||+++...+..+.. ..|..++++|. -.+|+.... +..++|||+.+|+........
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~--d~~v~~wd~~t~~~~~~~~~~~~~~ 232 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER--NGNIRIFDWTLNLSAEENSQTELVK 232 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCCC----------CS
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC--CCEEEEEECCCCcccccccccCCcc
Confidence 589999999999999999999887666554 88999999985 455566555 567899999999876654310
Q ss_pred ------------------cccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCc-----------
Q 016020 270 ------------------LHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPS----------- 317 (396)
Q Consensus 270 ------------------L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~Ps----------- 317 (396)
-.+... +.|....+..|+....|+.+++||+.+++.......+.....
T Consensus 233 ~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (393)
T 4gq1_A 233 NPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI 312 (393)
T ss_dssp CCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEE
T ss_pred cceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccc
Confidence 112222 567777899999999999999999999876654333221111
Q ss_pred -------eEEEe-ecCeEEEEE-E-cCeEEEEeccc-ceeeeeccccccC---CCCCCCcEEEccCCcEEE
Q 016020 318 -------AFIFL-YENQLFLTF-R-NRTVAVWNFRG-ELVTSFEDHLLWH---PDCNTNNIYITSDQDLII 374 (396)
Q Consensus 318 -------AFiFl-y~~qLFLTf-s-~gti~iWd~~g-eL~t~fedh~l~~---~~c~~n~~~it~~qd~ii 374 (396)
..+|. ...++|++. + +|+|.+||.+. +.+..+..|--++ ...||+++..++..|=++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 313 SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred cccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 12222 234555554 3 49999999986 5555455553322 226788888777766443
No 123
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.19 E-value=1.2e-08 Score=90.56 Aligned_cols=182 Identities=10% Similarity=0.028 Sum_probs=131.3
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCc-----------eEEEEEcCC-eEEEEEecCCCeeeeE
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH-----------VQEIKISPG-IMLLIFNRSSSHVPLK 253 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~-----------VqEIkiSpg-~~Ll~~q~~~~~iplk 253 (396)
..|.-+.|++..+.+.+.+..++.+.+||+++.+.+..+.... ...+.+||+ -.+++... ...-.+.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCceEE
Confidence 4588899999555588888889999999999999888887633 788999975 44444442 1245688
Q ss_pred EEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEeccc----ccCCCceEEEeecCe-EE
Q 016020 254 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRT----EFMTPSAFIFLYENQ-LF 328 (396)
Q Consensus 254 Il~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t----~~~~PsAFiFly~~q-LF 328 (396)
+||+++|+.+..+...-..-..+.|.+ .+++|++...++.|.+||+.+++....... +...|....|.++++ +|
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEcCCCCceEEEecCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 999999999887762212234477777 889999999999999999999998875544 333455678888877 66
Q ss_pred EEEEc-CeEEEEeccc-ceeeeeccccccCC-CCCCCc-EEEccC
Q 016020 329 LTFRN-RTVAVWNFRG-ELVTSFEDHLLWHP-DCNTNN-IYITSD 369 (396)
Q Consensus 329 LTfs~-gti~iWd~~g-eL~t~fedh~l~~~-~c~~n~-~~it~~ 369 (396)
++-.. +.|.+||... +++..+.-+.+... ..++++ +|++..
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC
Confidence 66655 8999999965 66666654333211 134555 777764
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.17 E-value=5.1e-10 Score=105.33 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=108.0
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEE-----ecc--CceEEEEEcC--------CeEEEEEecCCCeeeeEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-----ISD--KHVQEIKISP--------GIMLLIFNRSSSHVPLKI 254 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lys-----Is~--~~VqEIkiSp--------g~~Ll~~q~~~~~iplkI 254 (396)
-..+.+.+++.++..+.|+++|+||+++.+.... +++ ..|..|.||| +-.+|+..+. +-.++|
T Consensus 93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~--D~tv~~ 170 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD--DCTLII 170 (393)
T ss_dssp ----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET--TSEEEE
T ss_pred ceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC--CCeEEE
Confidence 3445566788999999999999999999876432 232 7899999997 3345566665 678999
Q ss_pred EEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEec----------------------
Q 016020 255 LSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS---------------------- 309 (396)
Q Consensus 255 l~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~---------------------- 309 (396)
||+.+++.+..+. .+..+ +.|.+....+|+....|+.+++||+.+++.....
T Consensus 171 Wd~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 171 WRLTDEGPILAGY---PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEETTEEEEEEE---ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EECCCCceeeeec---CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9999998887655 33344 8898855568999999999999999998765422
Q ss_pred ---ccccCCCceEEEe-ecCeEEEEEEc-CeEEEEeccc-ceeeeecccc
Q 016020 310 ---RTEFMTPSAFIFL-YENQLFLTFRN-RTVAVWNFRG-ELVTSFEDHL 353 (396)
Q Consensus 310 ---~t~~~~PsAFiFl-y~~qLFLTfs~-gti~iWd~~g-eL~t~fedh~ 353 (396)
..+........|. ++++.+++.+. +++.+||+.. .....+.+|.
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~ 297 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDST 297 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeec
Confidence 2344555666665 68888888877 8999999876 4555665554
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.15 E-value=1.3e-09 Score=108.01 Aligned_cols=133 Identities=20% Similarity=0.249 Sum_probs=87.1
Q ss_pred CCCeEEeeCCCCcEEEeecCCCeEEEEeccCc---eEEEEecc-C-ceEEEEEcC----------------CeEEEEEec
Q 016020 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSISD-K-HVQEIKISP----------------GIMLLIFNR 245 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknY---s~lysIs~-~-~VqEIkiSp----------------g~~Ll~~q~ 245 (396)
.||+-|-| |+| |.+..+++|+..+. +.+|+... + -|..|.++| .+-.|++.|
T Consensus 49 ~~~~~~~~-----~~~--~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp 121 (356)
T 2w18_A 49 RAGCKEPC-----IIT--ACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS 121 (356)
T ss_dssp ----CEEE-----EEE--EESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC--
T ss_pred cCCCCccE-----EEE--eccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC
Confidence 35666655 566 67899999999999 89999887 3 366666666 333434333
Q ss_pred C------------C-------------------CeeeeEEEEe-ecCcEEEEEEeecccCCc--cchhhh--hcceeeEe
Q 016020 246 S------------S-------------------SHVPLKILSI-EDGTVLKVFYHLLHRNKK--VDFIEQ--FNEKLLVK 289 (396)
Q Consensus 246 ~------------~-------------------~~iplkIl~I-etG~~l~s~~~~L~~sk~--i~FiE~--~~ekLLIK 289 (396)
. + ..-.+++|++ ++|+.+.++. +|+... +.|.+. .++.|+..
T Consensus 122 d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~--~~~~~v~~l~fs~~~g~~~~LaSg 199 (356)
T 2w18_A 122 DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF--LMPPEETILTFAEVQGMQEALLGT 199 (356)
T ss_dssp ----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE--ECCCSSCEEEEEEEETSTTEEEEE
T ss_pred CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeec--cCCCceeeEEeeccCCCCceEEEe
Confidence 3 0 2456777777 5577777655 233333 677776 45899999
Q ss_pred ecCCeeeEEEcccceEEEecccccCC---CceEEEeecCeEE
Q 016020 290 QENENLQILDVRNAELMEVSRTEFMT---PSAFIFLYENQLF 328 (396)
Q Consensus 290 Qed~~L~I~Dv~~~ki~~v~~t~~~~---PsAFiFly~~qLF 328 (396)
..|+.|+|||+.+++++++..++... ..+..|+++++++
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~l 241 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLF 241 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEE
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEE
Confidence 99999999999999999988765432 2223466655544
No 126
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.09 E-value=7.7e-10 Score=117.67 Aligned_cols=151 Identities=12% Similarity=0.169 Sum_probs=121.9
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
.+.|.+ |+.|+..+.|+.++|||+++.+.+..+.. ..|..+.++|+-..++.... ...++|||+++|+.. .+..
T Consensus 63 ~l~fsp--g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~--dg~V~lwd~~~~~~~-~~~i 137 (902)
T 2oaj_A 63 EMRFVK--GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQ--NGSMIVYDIDRDQLS-SFKL 137 (902)
T ss_dssp EEEEET--TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEET--TSCEEEEETTTTEEE-EEEE
T ss_pred EEEEcC--CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcC--CCcEEEEECCCCccc-ccee
Confidence 678998 77888888999999999999999888865 67999999998877777666 456799999999864 3321
Q ss_pred ---------ecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccc------------------cCCCce
Q 016020 269 ---------LLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE------------------FMTPSA 318 (396)
Q Consensus 269 ---------~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~------------------~~~PsA 318 (396)
+-.|... ++|.+..+..|++..+|+.+ +||+.+++...+...+ ...+.+
T Consensus 138 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~ 216 (902)
T 2oaj_A 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQ 216 (902)
T ss_dssp CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEE
T ss_pred ccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEE
Confidence 1123333 78888667899999999999 9999999988766544 356788
Q ss_pred EEEeecCeEEEEEEc-CeEEEEecc-ccee
Q 016020 319 FIFLYENQLFLTFRN-RTVAVWNFR-GELV 346 (396)
Q Consensus 319 FiFly~~qLFLTfs~-gti~iWd~~-geL~ 346 (396)
..|.+++++++|-+. |+|.+||.+ |+++
T Consensus 217 v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 217 SLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 999999999999987 899999996 4644
No 127
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.09 E-value=3.3e-08 Score=87.75 Aligned_cols=228 Identities=15% Similarity=0.173 Sum_probs=148.5
Q ss_pred cccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc-----cee
Q 016020 107 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA-----LFE 181 (396)
Q Consensus 107 sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~-----LF~ 181 (396)
.|.-.++|..|++.+..+..... ++++-++.....+.+.+ . .++ .....+ +..|+.-...+ -++
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~-~-~~~----~v~~~d---~~~~~~~~~~~~~~~~~~~ 136 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGN-T-VNS----AVTAID---AKTGEVKGRLVLDDRKRTE 136 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEE-T-TTT----EEEEEE---TTTCCEEEEEESCCCCCCS
T ss_pred CccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEe-c-CCC----EEEEEe---CCCCeeEEEEecCCCcccc
Confidence 45678888888888887765322 45666776666555432 1 111 222222 22222100000 011
Q ss_pred ecccCCCCeEEeeCCCCcEEEee-cCCCeEEEEeccCceEEEEec--cCceEEEEEcCC-eEEEEEecCCCeeeeEEEEe
Q 016020 182 SESLKWPGFVEFDDVNGKVLTYS-AQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPG-IMLLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 182 ~~~l~~PgfVEFDd~NgkIlt~~-a~d~~YrVwdlknYs~lysIs--~~~VqEIkiSpg-~~Ll~~q~~~~~iplkIl~I 257 (396)
...-.+|.-+.|++-.+.+.+.+ ..++.+.+||+++.+.+..+. +..+..+.++|+ -.|++.... -.+.+||+
T Consensus 137 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~i~~~d~ 213 (353)
T 3vgz_A 137 EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNAD---GELITIDT 213 (353)
T ss_dssp SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTT---SEEEEEET
T ss_pred ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCC---CeEEEEEC
Confidence 11112366689998555555555 458889999999999999997 366899999964 455555442 35668999
Q ss_pred ecCcEEEEEEeecc-cCC---ccchhhhhcceeeEeecC-CeeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEE
Q 016020 258 EDGTVLKVFYHLLH-RNK---KVDFIEQFNEKLLVKQEN-ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTF 331 (396)
Q Consensus 258 etG~~l~s~~~~L~-~sk---~i~FiE~~~ekLLIKQed-~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTf 331 (396)
.+|+.+..+..--. +.. .+.|.+ .+++|++...+ ..|.+||+.+++++...... .|....|.++++ +|++-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 214 ADNKILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNILAKVAAP--ESLAVLFNPARNEAYVTH 290 (353)
T ss_dssp TTTEEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEEEEEECS--SCCCEEEETTTTEEEEEE
T ss_pred CCCeEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC--CCceEEECCCCCEEEEEE
Confidence 99999988763111 111 267777 78888887654 89999999999988755543 367889999987 77777
Q ss_pred E-cCeEEEEeccc-ceeeeecc
Q 016020 332 R-NRTVAVWNFRG-ELVTSFED 351 (396)
Q Consensus 332 s-~gti~iWd~~g-eL~t~fed 351 (396)
. +++|.+||.+. +++..++.
T Consensus 291 ~~~~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 291 RQAGKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEECCCCeEEEEEec
Confidence 5 49999999975 77666653
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.08 E-value=3.2e-08 Score=99.53 Aligned_cols=253 Identities=9% Similarity=0.045 Sum_probs=168.6
Q ss_pred cchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 98 RDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 98 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
+.++++....|.-+++|..|++.+-.+..... ++++-++.....|.+.| .| .. .+.+.+. . ..+.
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~---~d--~~--V~v~D~~---~---~t~~ 213 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIG---RD--AR--IDMIDLW---A---KEPT 213 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEE---TT--SE--EEEEETT---S---SSCE
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEEC---CC--Ce--EEEEECc---C---CCCc
Confidence 34556666778899999999999998875544 89998888888777755 12 22 2222220 0 0122
Q ss_pred cceeecccCCCCeEEeeCC---CCcE-EEeecCCCeEEEEeccCceEEEEecc-------------CceEEEEEcC-CeE
Q 016020 178 ALFESESLKWPGFVEFDDV---NGKV-LTYSAQDSIYKVFDLKNYTMLYSISD-------------KHVQEIKISP-GIM 239 (396)
Q Consensus 178 ~LF~~~~l~~PgfVEFDd~---NgkI-lt~~a~d~~YrVwdlknYs~lysIs~-------------~~VqEIkiSp-g~~ 239 (396)
.+-+-..-.+|-.+.|++. +|+. .+.+..++.++|||..+.+.+..|+. ..+..|.+|| |-.
T Consensus 214 ~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 214 KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred EEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 2222222346888999972 4554 45455689999999999999999874 1688999997 555
Q ss_pred EEEEecCCCeeeeEEEEeecCcEEEEEEeecc-cCCccchhhhhcceeeEee-cCCeeeEEEcccceEEEecccccC-CC
Q 016020 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH-RNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRTEFM-TP 316 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~-~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v~~t~~~-~P 316 (396)
+++.... .-.+.+||+.+++.+........ .-..+.|.+ .+.++++.. .+..+.+||+.+++++.+..+... +|
T Consensus 294 ~~vs~~~--~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~ 370 (543)
T 1nir_A 294 FIVNVKE--TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 370 (543)
T ss_dssp EEEEETT--TTEEEEEECTTSSSCEEEEEECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC
T ss_pred EEEEECC--CCeEEEEEecCCCcceeEEeccCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC
Confidence 5565544 46788999999887763222111 111267776 889988764 578999999999999987665433 23
Q ss_pred -ceEE-Eeec-CeEEEEEE--cCeEEEEecc--------cceeeeeccccccCCC---CC-CCcEEEcc
Q 016020 317 -SAFI-FLYE-NQLFLTFR--NRTVAVWNFR--------GELVTSFEDHLLWHPD---CN-TNNIYITS 368 (396)
Q Consensus 317 -sAFi-Fly~-~qLFLTfs--~gti~iWd~~--------geL~t~fedh~l~~~~---c~-~n~~~it~ 368 (396)
+... +.++ +.+|+|-+ +++|.+||.+ ++.+..++.|-.+... .| ...+|++.
T Consensus 371 g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 371 GRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred CCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 2222 4455 88888875 5899999997 4677888877543222 23 35667765
No 129
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.07 E-value=2.8e-10 Score=114.80 Aligned_cols=155 Identities=12% Similarity=0.026 Sum_probs=121.6
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceE-E--EEeccCceEEE--EEcCCe-EEEEEecCCCeeeeEEEEeecCcEE
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-L--YSISDKHVQEI--KISPGI-MLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~-l--ysIs~~~VqEI--kiSpg~-~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
-+.|.+ +..|+..+.|+++++||+++... + .......|..| .++|+- .+|+.... +..++|||+.+|+.+
T Consensus 271 sv~~s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~--D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 271 TFDFLS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV--DGYFYIFNPKDIATT 346 (524)
T ss_dssp EEEESS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET--TSEEEEECGGGHHHH
T ss_pred EEEecC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc--CCeEEEEECCCCCcc
Confidence 356665 34688889999999999997642 2 33345889999 567742 55566655 678999999999988
Q ss_pred EEEEeecc--cCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEEe
Q 016020 264 KVFYHLLH--RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWN 340 (396)
Q Consensus 264 ~s~~~~L~--~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd 340 (396)
..+.-... .-..+.|.+ +++.|+...+|..+++||++++++..+..+|..++.+.-|.++++++++-+. |+|.+||
T Consensus 347 ~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 347 KTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp CEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred cccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 76652111 123589998 6888999999999999999999988877789999999999999999999887 9999999
Q ss_pred cccceeeee
Q 016020 341 FRGELVTSF 349 (396)
Q Consensus 341 ~~geL~t~f 349 (396)
..+.+...+
T Consensus 426 ~~~~~~~~~ 434 (524)
T 2j04_B 426 AARRLLHGI 434 (524)
T ss_dssp SCSSTTTCC
T ss_pred chHhhcccc
Confidence 988655444
No 130
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.8e-09 Score=111.74 Aligned_cols=173 Identities=10% Similarity=0.045 Sum_probs=130.5
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccC------ceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcE-
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK------HVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV- 262 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~------~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~- 262 (396)
=|.|.+ .|+.||..+.|+..+|||.++ ++..+.+. .|..+.|||+-.+|+.... +..++||++++|+.
T Consensus 90 ~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~--DGtVkIWd~~~~~l~ 164 (588)
T 2j04_A 90 VCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNE--DGELQFFSIRKNSEN 164 (588)
T ss_dssp EEEECS-SSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEET--TSEEEEEECCCCTTT
T ss_pred EEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcC--CCEEEEEECCCCccc
Confidence 467888 899999999999999999766 77776633 3999999988888787777 67799999999963
Q ss_pred ------EEEEEe-ecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEE---Eec-ccccCCCceEEEeecCeEE
Q 016020 263 ------LKVFYH-LLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELM---EVS-RTEFMTPSAFIFLYENQLF 328 (396)
Q Consensus 263 ------l~s~~~-~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~---~v~-~t~~~~PsAFiFly~~qLF 328 (396)
+..+.. .-.|... ++|.+ .+ |+....|..+++||+.++++. .+. ..|...+.+.-|+ ++..
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~L 239 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKV 239 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEE
T ss_pred cccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEE
Confidence 455541 1122233 89997 56 999999999999999998853 233 4777889998898 5777
Q ss_pred EEEEcCeEEEEecccc-eeeeeccccccC-----CCCCCCcEEEccCCcE
Q 016020 329 LTFRNRTVAVWNFRGE-LVTSFEDHLLWH-----PDCNTNNIYITSDQDL 372 (396)
Q Consensus 329 LTfs~gti~iWd~~ge-L~t~fedh~l~~-----~~c~~n~~~it~~qd~ 372 (396)
++.++|+|++||.++. +.+..-+|.-+. |+.++....+++++|=
T Consensus 240 ASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 240 VLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp EEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCE
T ss_pred EEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCC
Confidence 7778999999999985 423222566542 2377777777777663
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.04 E-value=1.1e-08 Score=89.73 Aligned_cols=246 Identities=10% Similarity=0.015 Sum_probs=150.0
Q ss_pred hccccceeeeccccceEEEecCCC----CceEEEEeeecCCCeEEEEEeEe---cCCC--ceeeeEeeehhhhhhCCCCC
Q 016020 105 AHSGVCAAFSRETNRRICFLNVSP----DEVIRSLFYNKNNDSLITVSVYA---SDNF--SSLKCRSTKIEYIRRGKPDS 175 (396)
Q Consensus 105 ~~sG~c~af~~~t~~~ic~lN~s~----~evIrsifyN~~n~slI~vSv~~---sd~~--s~L~cr~~~~~~i~~gk~~~ 175 (396)
...|.-.+||..+++.+-.+.... ..-++++-++.+.+.|.+++... .+.+ ..=+.+..+.+ .
T Consensus 53 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~---~----- 124 (337)
T 1pby_B 53 NKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE---T----- 124 (337)
T ss_dssp TTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT---T-----
T ss_pred CCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECC---C-----
Confidence 446778889988898887776543 12455677777666666654211 0111 00122222221 1
Q ss_pred CCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCc-eEEEEEcCCeE-EEEEecCCCee---
Q 016020 176 GFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH-VQEIKISPGIM-LLIFNRSSSHV--- 250 (396)
Q Consensus 176 ~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~-VqEIkiSpg~~-Ll~~q~~~~~i--- 250 (396)
+..+-.-..-..|.-+.|++ +|+.+... ++.+.+||+.+.+.+..+.... ...+.++|+-. |++.......+
T Consensus 125 ~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 201 (337)
T 1pby_B 125 LSRRKAFEAPRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATP 201 (337)
T ss_dssp TEEEEEEECCSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEE
T ss_pred CcEEEEEeCCCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeee
Confidence 11111111123577788998 56644433 6889999999999988887532 22335565433 22222222222
Q ss_pred ------------------eeEEEEeecCcEEEEEEeecccCC--ccchhhhhcceeeEeecCCeeeEEEcccceEEEecc
Q 016020 251 ------------------PLKILSIEDGTVLKVFYHLLHRNK--KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR 310 (396)
Q Consensus 251 ------------------plkIl~IetG~~l~s~~~~L~~sk--~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~ 310 (396)
-+.+||+++|+.. .+.+.-+... .+.|.+ .+.+|++. +..|.+||+.+++.+....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 277 (337)
T 1pby_B 202 FYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVP 277 (337)
T ss_dssp EEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred eeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceec
Confidence 5799999999986 4332212112 278887 88889988 7899999999998877554
Q ss_pred cccCCCceEEEeecCe-EEEEEEcCeEEEEeccc-ceeeeeccccccCCCCCCCcEEE
Q 016020 311 TEFMTPSAFIFLYENQ-LFLTFRNRTVAVWNFRG-ELVTSFEDHLLWHPDCNTNNIYI 366 (396)
Q Consensus 311 t~~~~PsAFiFly~~q-LFLTfs~gti~iWd~~g-eL~t~fedh~l~~~~c~~n~~~i 366 (396)
.. ..|.+..|.++++ ||++-.++.|.+||... +++..++-+.....-+....+|.
T Consensus 278 ~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (337)
T 1pby_B 278 LP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFT 334 (337)
T ss_dssp CS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGGCCCBTCCCEEEE
T ss_pred CC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCCCceeEeeeEEEe
Confidence 43 5789999999887 56664459999999976 77777765433222234444553
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.00 E-value=4.6e-07 Score=79.56 Aligned_cols=224 Identities=10% Similarity=0.051 Sum_probs=135.6
Q ss_pred hccccceeeecc-ccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeec
Q 016020 105 AHSGVCAAFSRE-TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESE 183 (396)
Q Consensus 105 ~~sG~c~af~~~-t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~ 183 (396)
...|...+|+.. +++....--.....-+.++-++...+.|++++. ++ ..++...+.. ..|++ ..+-.-.
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~-~~v~~~~~~~---~~~~~---~~~~~~~ 81 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR---PE-FRVLAYRIAP---DDGAL---TFAAESA 81 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEET---TT-TEEEEEEECT---TTCCE---EEEEEEE
T ss_pred CCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeec---CC-CeEEEEEecC---CCCce---eeccccc
Confidence 456777888763 454333221223445666777766665555331 21 2343333321 01111 1111111
Q ss_pred ccCCCCeEEeeCCCCc-EEEeecCCCeEEEEec---cCceEEEEecc-CceEEEEEcCCe-EEEEEecCCCeeeeEEEEe
Q 016020 184 SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDL---KNYTMLYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 184 ~l~~PgfVEFDd~Ngk-Ilt~~a~d~~YrVwdl---knYs~lysIs~-~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~I 257 (396)
.-..|..+.|++ +|+ +++.+..++.+.+||+ +..+.+..+.. ..+..+.+||+- .|++.... .-.+.+|++
T Consensus 82 ~~~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~ 158 (343)
T 1ri6_A 82 LPGSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK--QDRICLFTV 158 (343)
T ss_dssp CSSCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG--GTEEEEEEE
T ss_pred cCCCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC--CCEEEEEEe
Confidence 123789999999 555 6566667999999999 66667777765 678999999764 45555433 345899999
Q ss_pred ec-CcEEEEE--EeecccCCc---cchhhhhcceeeEee-cCCeeeEEEcc--cceEEE---e--cccc---cCCCceEE
Q 016020 258 ED-GTVLKVF--YHLLHRNKK---VDFIEQFNEKLLVKQ-ENENLQILDVR--NAELME---V--SRTE---FMTPSAFI 320 (396)
Q Consensus 258 et-G~~l~s~--~~~L~~sk~---i~FiE~~~ekLLIKQ-ed~~L~I~Dv~--~~ki~~---v--~~t~---~~~PsAFi 320 (396)
.+ |+..... ....+.... +.|.+ .+++|++-. .+..+.+||+. ++++.. + .+.. ...|.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 98 7654433 333333322 66777 788887665 78899999994 454322 1 1111 34566789
Q ss_pred EeecCe-EEEEEE-cCeEEEEecc
Q 016020 321 FLYENQ-LFLTFR-NRTVAVWNFR 342 (396)
Q Consensus 321 Fly~~q-LFLTfs-~gti~iWd~~ 342 (396)
|.++++ ||++-+ ++.|.+||++
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCEEEEEecCCCEEEEEEEc
Confidence 999885 555664 4899999998
No 133
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.00 E-value=4e-07 Score=82.14 Aligned_cols=182 Identities=13% Similarity=0.196 Sum_probs=120.8
Q ss_pred ccCCCCeEEeeCCCCc-EEEeecCCCeEEEEecc---CceEEEEeccC-----------ceEEEEEcCCeEEEEEecCCC
Q 016020 184 SLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLK---NYTMLYSISDK-----------HVQEIKISPGIMLLIFNRSSS 248 (396)
Q Consensus 184 ~l~~PgfVEFDd~Ngk-Ilt~~a~d~~YrVwdlk---nYs~lysIs~~-----------~VqEIkiSpg~~Ll~~q~~~~ 248 (396)
....|..+.|++ +|+ +.+.+..++.++|||+. ..+.+..+... .+..+.+||+--+++.....
T Consensus 84 ~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~- 161 (347)
T 3hfq_A 84 PGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS- 161 (347)
T ss_dssp ESCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-
T ss_pred CCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-
Confidence 356899999999 666 55555578999999996 45566666432 47889999765566655543
Q ss_pred eeeeEEEEee-cCcEEEEEEeecccCC---ccchhhhhcceeeEe-ecCCeeeEEEccc--ceEEEecc--cc------c
Q 016020 249 HVPLKILSIE-DGTVLKVFYHLLHRNK---KVDFIEQFNEKLLVK-QENENLQILDVRN--AELMEVSR--TE------F 313 (396)
Q Consensus 249 ~iplkIl~Ie-tG~~l~s~~~~L~~sk---~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~--~ki~~v~~--t~------~ 313 (396)
-.+.+|++. +|+........++... .+.|.+ .+.+|++- ..++.+.+||+.. +++..+.. +. .
T Consensus 162 -~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 162 -DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp -TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred -CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 368899999 6764443333333322 278887 88888884 5778999999984 66543221 11 1
Q ss_pred CCCceEEEeecCe-EEEEEE-cCeEEEEecc--c--ceeeeeccccccC---CCCCCCc-EEEccC
Q 016020 314 MTPSAFIFLYENQ-LFLTFR-NRTVAVWNFR--G--ELVTSFEDHLLWH---PDCNTNN-IYITSD 369 (396)
Q Consensus 314 ~~PsAFiFly~~q-LFLTfs-~gti~iWd~~--g--eL~t~fedh~l~~---~~c~~n~-~~it~~ 369 (396)
..|.+..|.++++ ||++-+ +++|.+||++ | +.+..+..+-.+. -..++++ +|++..
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 3488899999997 677777 4899999986 3 3444555432211 1266776 555543
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.98 E-value=3.9e-08 Score=86.86 Aligned_cols=228 Identities=9% Similarity=0.039 Sum_probs=143.7
Q ss_pred chhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc
Q 016020 99 DIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA 178 (396)
Q Consensus 99 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~ 178 (396)
.++++-...|.-.++|..|++.+-.+......-++++-+....+.+.+.+ ..+ ..+. ..+. .. +..
T Consensus 12 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---~~~-~~i~--~~d~---~t-----~~~ 77 (349)
T 1jmx_B 12 EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---NHY-GDIY--GIDL---DT-----CKN 77 (349)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE---TTT-TEEE--EEET---TT-----TEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe---CCC-CcEE--EEeC---CC-----CcE
Confidence 34455566788889999999988887755422356666776655444432 111 1222 2211 11 111
Q ss_pred ceeec-------ccCCCCeEEeeCCCCcEEEeecC------------CCeEEEEeccC---ceEEEEecc-CceEEEEEc
Q 016020 179 LFESE-------SLKWPGFVEFDDVNGKVLTYSAQ------------DSIYKVFDLKN---YTMLYSISD-KHVQEIKIS 235 (396)
Q Consensus 179 LF~~~-------~l~~PgfVEFDd~NgkIlt~~a~------------d~~YrVwdlkn---Ys~lysIs~-~~VqEIkiS 235 (396)
+..-. .-..|.-+.|++ +|+.++.... ++.+.+||+.+ .+.+-.... ..+..+.+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 156 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 156 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred EEEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeEC
Confidence 11111 123478899998 6766665554 48999999998 443333333 568888999
Q ss_pred CCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccC------------------------------------------
Q 016020 236 PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN------------------------------------------ 273 (396)
Q Consensus 236 pg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~s------------------------------------------ 273 (396)
|+-.+++. .. . +.+||+.+|+.+..+.. +..
T Consensus 157 ~dg~l~~~-~~--~--i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 157 DDGSLYVA-GP--D--IYKMDVKTGKYTVALPL--RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp TTSCEEEE-SS--S--EEEECTTTCCEEEEECS--TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred CCCcEEEc-cC--c--EEEEeCCCCceeccccc--cccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 76555443 22 2 89999999998876542 110
Q ss_pred -------------C---------------ccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecC
Q 016020 274 -------------K---------------KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN 325 (396)
Q Consensus 274 -------------k---------------~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~ 325 (396)
. .+.|.+..+.+|++. +..|.+||+.+++.++..... ..|....|.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg 306 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKG 306 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSS
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCC
Confidence 0 011112267778877 779999999999988765433 458899999987
Q ss_pred e-EEEEEEcCeEEEEeccc-ceeeeecc
Q 016020 326 Q-LFLTFRNRTVAVWNFRG-ELVTSFED 351 (396)
Q Consensus 326 q-LFLTfs~gti~iWd~~g-eL~t~fed 351 (396)
+ ||++-.+++|.+||.+. +++..++-
T Consensus 307 ~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 307 DKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp SCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEecCCCeEEEEeccccceeeeeec
Confidence 5 56654459999999976 77777653
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.97 E-value=2.2e-08 Score=97.36 Aligned_cols=182 Identities=12% Similarity=0.118 Sum_probs=120.9
Q ss_pred eEEeeCCCCcEEE----eecCCCeEEEEeccCc--------eEEEEec-----cCceEEEEEcCC-eEEEEEecCCCeee
Q 016020 190 FVEFDDVNGKVLT----YSAQDSIYKVFDLKNY--------TMLYSIS-----DKHVQEIKISPG-IMLLIFNRSSSHVP 251 (396)
Q Consensus 190 fVEFDd~NgkIlt----~~a~d~~YrVwdlknY--------s~lysIs-----~~~VqEIkiSpg-~~Ll~~q~~~~~ip 251 (396)
-+.|++ +|+.|+ ..+.|+.++|||+.+. +.++.+. ...|..++|+|. -.+++.... +..
T Consensus 97 ~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~--Dg~ 173 (434)
T 2oit_A 97 HLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA--DGS 173 (434)
T ss_dssp EEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET--TSC
T ss_pred EEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC--CCe
Confidence 468888 688888 6788999999999876 3333332 478999999986 344444444 467
Q ss_pred eEEEEeecCcEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEeccccc-------CCCceEEE
Q 016020 252 LKILSIEDGTVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF-------MTPSAFIF 321 (396)
Q Consensus 252 lkIl~IetG~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~-------~~PsAFiF 321 (396)
++|||+.+|+.+.... .|... +.|.+ .+.+|++...|+.++|||++ ++.......+. ....++.|
T Consensus 174 v~iwD~~~~~~~~~~~---~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 174 IAVLQVTETVKVCATL---PSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp EEEEEESSSEEEEEEE---CGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred EEEEEcCCCcceeecc---CCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE
Confidence 9999999997655443 33333 78888 69999999999999999999 44444322222 25678889
Q ss_pred eecCeEEEEEEcCe--------EEEEecccc-e--eeeecccccc-CC--CCCCCcEEEc--cCCcEEEEeccC
Q 016020 322 LYENQLFLTFRNRT--------VAVWNFRGE-L--VTSFEDHLLW-HP--DCNTNNIYIT--SDQDLIISYCKA 379 (396)
Q Consensus 322 ly~~qLFLTfs~gt--------i~iWd~~ge-L--~t~fedh~l~-~~--~c~~n~~~it--~~qd~ii~~~~~ 379 (396)
..++.++++++++. +.+||+... - ...+..+... .+ -.-.-.+|++ .|.++++.-.-.
T Consensus 249 ~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~ 322 (434)
T 2oit_A 249 IGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAA 322 (434)
T ss_dssp EETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETT
T ss_pred ecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCC
Confidence 98888887877642 889999852 1 1222222221 00 1112245666 677776654433
No 136
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.91 E-value=2.5e-08 Score=97.01 Aligned_cols=163 Identities=9% Similarity=0.052 Sum_probs=116.5
Q ss_pred eEEeeCCCCcEEEeecCCCeEEEEeccCceE----------E------EEecc-CceEEEEEcCCeEEEEEe--cCCCee
Q 016020 190 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM----------L------YSISD-KHVQEIKISPGIMLLIFN--RSSSHV 250 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~~YrVwdlknYs~----------l------ysIs~-~~VqEIkiSpg~~Ll~~q--~~~~~i 250 (396)
.+.+...+|.+.+. ..++ ++||+..+... + ..+.. ..|..+.|||+-.+|+.. .....-
T Consensus 41 ~lavs~~~~~l~~~-~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~ 118 (434)
T 2oit_A 41 LLAVSNKYGLVFAG-GASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGS 118 (434)
T ss_dssp CEEEETTTTEEEEE-ETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEE
T ss_pred EEEEecCCCEEEEE-CCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCc
Confidence 46677756665554 3455 89988754311 1 11222 359999999765444421 234478
Q ss_pred eeEEEEeecC--------cEEEEEEeecccCCc---cchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceE
Q 016020 251 PLKILSIEDG--------TVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAF 319 (396)
Q Consensus 251 plkIl~IetG--------~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAF 319 (396)
.++|||++++ +.+..+..+-.|+.. +.|.+..+..|++...|+.++|||+++++.......|...+.+.
T Consensus 119 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v 198 (434)
T 2oit_A 119 IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSV 198 (434)
T ss_dssp EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEE
T ss_pred eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEE
Confidence 8999999987 445555544345555 78888668889999999999999999997776666778889999
Q ss_pred EEeecCeEEEEEEc-CeEEEEecccceeeeeccccc
Q 016020 320 IFLYENQLFLTFRN-RTVAVWNFRGELVTSFEDHLL 354 (396)
Q Consensus 320 iFly~~qLFLTfs~-gti~iWd~~geL~t~fedh~l 354 (396)
-|.++++.+++-+. |+|.+||.+|+.+..+..|.-
T Consensus 199 ~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~ 234 (434)
T 2oit_A 199 CWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPF 234 (434)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTT
T ss_pred EEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcc
Confidence 99999988887776 899999999876666655543
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.89 E-value=4.9e-08 Score=98.18 Aligned_cols=150 Identities=14% Similarity=0.112 Sum_probs=117.5
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec-cCceEEEEEcCCe-EEEEEecCCCeeeeEEEEe--ecCc
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGI-MLLIFNRSSSHVPLKILSI--EDGT 261 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs-~~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~I--etG~ 261 (396)
..|.+. ||+ .|++++.+..|+.++|||..+.+.+-.|. +..+..+++||+- .|++.... -.+.+||+ ++|+
T Consensus 139 ~~~~~~-~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~ 213 (543)
T 1nir_A 139 KKQLND-LDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD---ARIDMIDLWAKEPT 213 (543)
T ss_dssp SSCCSC-CCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT---SEEEEEETTSSSCE
T ss_pred cccccc-cCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC---CeEEEEECcCCCCc
Confidence 356676 887 68999999999999999999999999998 5679999999765 44444433 67999999 9999
Q ss_pred EEEEEEeecccCC--ccchhh---hhcceeeEeec-CCeeeEEEcccceEEEecccccC-----------CCceEEEeec
Q 016020 262 VLKVFYHLLHRNK--KVDFIE---QFNEKLLVKQE-NENLQILDVRNAELMEVSRTEFM-----------TPSAFIFLYE 324 (396)
Q Consensus 262 ~l~s~~~~L~~sk--~i~FiE---~~~ekLLIKQe-d~~L~I~Dv~~~ki~~v~~t~~~-----------~PsAFiFly~ 324 (396)
.+..+.. ... .+.|.+ -.+.+|++..+ ++.+.|||..+++++.+..+..+ .|.+..|.++
T Consensus 214 ~~~~i~~---g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 214 KVAEIKI---GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp EEEEEEC---CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred EEEEEec---CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 9887762 222 266654 16889999985 89999999999999887665432 4668889885
Q ss_pred -CeEEEEEEc-CeEEEEeccc
Q 016020 325 -NQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 325 -~qLFLTfs~-gti~iWd~~g 343 (396)
+.++++.+. |+|.+||...
T Consensus 291 ~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 291 HPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp SSEEEEEETTTTEEEEEECTT
T ss_pred CCEEEEEECCCCeEEEEEecC
Confidence 455666666 8999999976
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.84 E-value=4.3e-07 Score=80.63 Aligned_cols=145 Identities=10% Similarity=0.080 Sum_probs=109.8
Q ss_pred eeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcCCe-EEEEEecCCCeeeeEEEEeecCcE-EEEEEe
Q 016020 193 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTV-LKVFYH 268 (396)
Q Consensus 193 FDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~IetG~~-l~s~~~ 268 (396)
|+...+.+.+.++.++.+++||+.+.+.+..+.. ... .+.+||+- .|++..... -.+.+||+++|+. ...+..
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~--~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFC--QTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTT--CEEEEEECSSSSCEEEEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCC--CeEEEEECCCCceeEEeccc
Confidence 5666788889999999999999999998887764 566 99999754 455555543 3788999999998 555552
Q ss_pred ecccCCc-cchhhhhcceeeEeecCC---eeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEEEc-Ce-EEEEec
Q 016020 269 LLHRNKK-VDFIEQFNEKLLVKQENE---NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFRN-RT-VAVWNF 341 (396)
Q Consensus 269 ~L~~sk~-i~FiE~~~ekLLIKQed~---~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs~-gt-i~iWd~ 341 (396)
- ..... +.|.+ .+.+|++..++. .|.+||+.+++++...+. ...|....|.++++ ||++-.. +. |.+|++
T Consensus 82 ~-~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 G-QSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp C-SSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred C-CCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 2 12223 66777 889999777663 899999999998876544 45678999999987 7777666 77 999999
Q ss_pred cc
Q 016020 342 RG 343 (396)
Q Consensus 342 ~g 343 (396)
+.
T Consensus 159 ~~ 160 (331)
T 3u4y_A 159 DA 160 (331)
T ss_dssp CT
T ss_pred CC
Confidence 86
No 139
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.1e-07 Score=99.68 Aligned_cols=212 Identities=12% Similarity=0.100 Sum_probs=147.8
Q ss_pred ccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCC
Q 016020 108 GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKW 187 (396)
Q Consensus 108 G~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~ 187 (396)
|....++-++++..-.+|..+++-|.++=++.+...|.+.|. |+ .|+.-..+-+.. .+. ....-++..
T Consensus 64 g~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~---dg----~V~iwd~~~~l~-~l~-~~~~~~~~s--- 131 (588)
T 2j04_A 64 EFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSN---NG----NVSVFKDNKMLT-NLD-SKGNLSSRT--- 131 (588)
T ss_dssp CCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEET---TS----CEEEEETTEEEE-ECC-CSSCSTTTC---
T ss_pred CCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeC---CC----cEEEEeCCceee-ecc-CCCcccccc---
Confidence 456667777777666788677888999999988777776552 21 222222100000 000 000000000
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCce-------EEEEec------cCceEEEEEcCCeEEEEEecCCCeeeeEE
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------MLYSIS------DKHVQEIKISPGIMLLIFNRSSSHVPLKI 254 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs-------~lysIs------~~~VqEIkiSpg~~Ll~~q~~~~~iplkI 254 (396)
-..|.|.+ +|+.|+..++|+++++||+++.+ .+..|. ...|..|.+||+- |+.... +-.+++
T Consensus 132 v~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~---D~tVrl 206 (588)
T 2j04_A 132 YHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALS---NNSVFS 206 (588)
T ss_dssp EEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEET---TCCEEE
T ss_pred EEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeC---CCeEEE
Confidence 12689988 89999999999999999999985 367773 1589999999998 544444 588999
Q ss_pred EEeecCcEE---EEEEeeccc--CCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEE--eecCeE
Q 016020 255 LSIEDGTVL---KVFYHLLHR--NKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIF--LYENQL 327 (396)
Q Consensus 255 l~IetG~~l---~s~~~~L~~--sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiF--ly~~qL 327 (396)
|++.+++.. ..+.. .|+ -..+.|. +.+|++.. ++.+++||+.++++....-+|.......-| .++++.
T Consensus 207 Wd~~~~~~~~~~~tL~~-~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~ 281 (588)
T 2j04_A 207 MTVSASSHQPVSRMIQN-ASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTI 281 (588)
T ss_dssp ECCCSSSSCCCEEEEEC-CCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEE
T ss_pred EECCCCccccceeeecc-cccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCE
Confidence 999998842 34431 132 2348888 68888887 689999999999997766679999999999 888866
Q ss_pred EEEEE-cCeEEEEecc
Q 016020 328 FLTFR-NRTVAVWNFR 342 (396)
Q Consensus 328 FLTfs-~gti~iWd~~ 342 (396)
.++.. +|+ ++|.++
T Consensus 282 La~a~edG~-klw~~d 296 (588)
T 2j04_A 282 LLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEECSSCEE-EEEESS
T ss_pred EEEEcCCCC-EEEeec
Confidence 55555 688 999974
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.82 E-value=7.1e-07 Score=78.35 Aligned_cols=155 Identities=12% Similarity=0.140 Sum_probs=105.5
Q ss_pred cCCCCeEEeeCCCCcEEEe-ecCCCeEEEEecc--Cce--EEEEecc-CceEEEEEcCCe-EEEEEecCCCeeeeEEEEe
Q 016020 185 LKWPGFVEFDDVNGKVLTY-SAQDSIYKVFDLK--NYT--MLYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~-~a~d~~YrVwdlk--nYs--~lysIs~-~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~I 257 (396)
...|..+.|++ +|+.++. +..++.+++|++. +.+ .+-.+.. ..+..+.+||+- .|++.... .-.+.+|++
T Consensus 37 ~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~ 113 (343)
T 1ri6_A 37 PGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN--AGNVSVTRL 113 (343)
T ss_dssp SSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT--TTEEEEEEE
T ss_pred CCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC--CCeEEEEEC
Confidence 34688999998 6664444 4445999999998 444 5555543 588999999764 45455543 245899999
Q ss_pred ecCcEEEEEEeecc--cCCccchhhhhcceeeEee-cCCeeeEEEccc-ceEEEe-----cccccCCCceEEEeecCe-E
Q 016020 258 EDGTVLKVFYHLLH--RNKKVDFIEQFNEKLLVKQ-ENENLQILDVRN-AELMEV-----SRTEFMTPSAFIFLYENQ-L 327 (396)
Q Consensus 258 etG~~l~s~~~~L~--~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~-~ki~~v-----~~t~~~~PsAFiFly~~q-L 327 (396)
.+|+........-. .-..+.|.+ .+++|++.. .+..|.+||+.+ +++..+ .......|....|.++++ +
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCccccccccccCCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 65543322221111 122377777 788899887 889999999998 776532 223445788999999998 4
Q ss_pred EEEE-EcCeEEEEeccc
Q 016020 328 FLTF-RNRTVAVWNFRG 343 (396)
Q Consensus 328 FLTf-s~gti~iWd~~g 343 (396)
|++- .+++|.+||++.
T Consensus 193 ~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEETTTTEEEEEESSC
T ss_pred EEEeCCCCEEEEEEecC
Confidence 5554 348999999953
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.81 E-value=6.8e-08 Score=95.92 Aligned_cols=158 Identities=11% Similarity=0.039 Sum_probs=110.2
Q ss_pred eEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccC-----ceEEEEE
Q 016020 160 CRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-----HVQEIKI 234 (396)
Q Consensus 160 cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~-----~VqEIki 234 (396)
++.++++++..|+... .|--+.|.+ +|+.++. +.|+.+++||+.+.+..-.+... .|..+.|
T Consensus 2 ~~~~~~~~~~~~~~~~-----------~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~ 68 (723)
T 1xfd_A 2 KKKVTVEDLFSEDFKI-----------HDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI 68 (723)
T ss_dssp CCCCCHHHHTCTTTCC-----------CCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEE
T ss_pred CccccHHHHhCCCCcc-----------cccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEE
Confidence 3556788887776431 233445666 6886654 68999999999999877777653 3899999
Q ss_pred cCCeEEEEEecCC-C------eeeeEEEEeecCcEEEEEEeeccc---CCccchhhhhcceeeEeecCCeeeEEEcccce
Q 016020 235 SPGIMLLIFNRSS-S------HVPLKILSIEDGTVLKVFYHLLHR---NKKVDFIEQFNEKLLVKQENENLQILDVRNAE 304 (396)
Q Consensus 235 Spg~~Ll~~q~~~-~------~iplkIl~IetG~~l~s~~~~L~~---sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~k 304 (396)
||+--.|++.... . ...+.||++++|+. ..+...-.+ -..+.|.+ .|++|+...+ ..|.+||+.+++
T Consensus 69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSC
T ss_pred CCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCc
Confidence 9765544444332 1 25688999999986 333211122 12378888 8999998887 689999999998
Q ss_pred EEEecccccC------------------CCceEEEeecCeEEEEEEc
Q 016020 305 LMEVSRTEFM------------------TPSAFIFLYENQLFLTFRN 333 (396)
Q Consensus 305 i~~v~~t~~~------------------~PsAFiFly~~qLFLTfs~ 333 (396)
.+.+...+.. .+.++-|+++++.+++.+.
T Consensus 146 ~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 146 AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 8876554332 3378999999997776663
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.79 E-value=1.3e-06 Score=74.06 Aligned_cols=221 Identities=11% Similarity=0.043 Sum_probs=129.0
Q ss_pred ccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhh-CCCCCCCcceeecccC
Q 016020 108 GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDSGFALFESESLK 186 (396)
Q Consensus 108 G~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~-gk~~~~~~LF~~~~l~ 186 (396)
|.-.+||..+++..-+.. +...|.++-++....-|++.+ +. .+ +..+ +.. |+. ..++....-.
T Consensus 22 ~~i~~~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~----~~--~i--~~~d---~~~~~~~---~~~~~~~~~~ 85 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQ--TPELFEAPNWSPDGKYLLLNS----EG--LL--YRLS---LAGDPSP---EKVDTGFATI 85 (297)
T ss_dssp EEEEEEETTTTEEEEEEE--ESSCCEEEEECTTSSEEEEEE----TT--EE--EEEE---SSSCCSC---EECCCTTCCC
T ss_pred eeEEEEeCCCCceeeecc--CCcceEeeEECCCCCEEEEEc----CC--eE--EEEe---CCCCCCc---eEeccccccc
Confidence 444566767776665554 245677787887666555532 32 22 2222 222 221 1222222122
Q ss_pred CCCeEEeeCCCCcEEEeec--CCCeEEEEec--cCceEEEEecc-CceEEEEEcCCe-EEEEEecCCCeeeeEEEEe--e
Q 016020 187 WPGFVEFDDVNGKVLTYSA--QDSIYKVFDL--KNYTMLYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKILSI--E 258 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a--~d~~YrVwdl--knYs~lysIs~-~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~I--e 258 (396)
.+.-+.|.+ +|+.+++.. .++..+||.+ .+.+ ...+.. ..+..+++||+- .|++....... ++||.+ .
T Consensus 86 ~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~l~~~~~~ 161 (297)
T 2ojh_A 86 CNNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQV--FDIYSMDID 161 (297)
T ss_dssp BCSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTE--EEEEEEETT
T ss_pred cccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCc--eEEEEEECC
Confidence 344578888 788888777 3456667665 4444 444544 568889999654 44434444334 566665 4
Q ss_pred cCcEEEEEEeecccC---CccchhhhhcceeeEee-cCCeeeEEEcc-cceEEEecccccCCCceEEEeecCeEEEEEEc
Q 016020 259 DGTVLKVFYHLLHRN---KKVDFIEQFNEKLLVKQ-ENENLQILDVR-NAELMEVSRTEFMTPSAFIFLYENQLFLTFRN 333 (396)
Q Consensus 259 tG~~l~s~~~~L~~s---k~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~-~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~ 333 (396)
+|+.. .+. .+. ..+.|.+ .+++|++.. .+..++||++. +++.......+...+....|.++++.+++.+.
T Consensus 162 ~~~~~-~~~---~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 162 SGVET-RLT---HGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp TCCEE-ECC---CSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred CCcce-Ecc---cCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 45442 222 222 2377776 788888766 58899999986 44444444455556677889999987666654
Q ss_pred ------------CeEEEEeccc-ce--eeeecccc
Q 016020 334 ------------RTVAVWNFRG-EL--VTSFEDHL 353 (396)
Q Consensus 334 ------------gti~iWd~~g-eL--~t~fedh~ 353 (396)
+.+.+||.++ ++ +..+.+|.
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 271 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ 271 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred CCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence 4699999987 43 44444443
No 143
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.77 E-value=4.3e-07 Score=86.90 Aligned_cols=160 Identities=13% Similarity=0.159 Sum_probs=112.1
Q ss_pred CCeEEeeCCCCcEEEeec-CC--CeEEEEeccCceEEEEecc--CceEEEEEcCCeE-EEEEecCCCeeeeEEEEeecCc
Q 016020 188 PGFVEFDDVNGKVLTYSA-QD--SIYKVFDLKNYTMLYSISD--KHVQEIKISPGIM-LLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a-~d--~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~-Ll~~q~~~~~iplkIl~IetG~ 261 (396)
..-+.|++ +|+.|++.. .+ ..+.+||+.+.+. ..+.. ..+.++.|||+-- |++........-+.+|++.+|+
T Consensus 225 ~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 225 NGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred ccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 34678888 788777443 34 4589999998775 45554 5689999997654 4444433455678888999987
Q ss_pred EEEEEEeecccCCccchhhhhcceeeEeecC---CeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-C---
Q 016020 262 VLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN---ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-R--- 334 (396)
Q Consensus 262 ~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed---~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-g--- 334 (396)
... +...-.....+.|.+ .+++|++...+ ..|.+||+.++++..+... . .+.+.-|.++++.+++.++ +
T Consensus 303 ~~~-l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~ 378 (415)
T 2hqs_A 303 PQR-ITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-F-LDETPSLAPNGTMVIYSSSQGMGS 378 (415)
T ss_dssp CEE-CCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEEECCCS-S-SCEEEEECTTSSEEEEEEEETTEE
T ss_pred EEE-EecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEEEecCC-C-CcCCeEEcCCCCEEEEEEcCCCcc
Confidence 432 211001112377877 88999887753 6899999999999766443 2 7889999999987666655 4
Q ss_pred eEEEEecccceeeeecccc
Q 016020 335 TVAVWNFRGELVTSFEDHL 353 (396)
Q Consensus 335 ti~iWd~~geL~t~fedh~ 353 (396)
.+.+||++|..+..+..|.
T Consensus 379 ~l~~~d~~g~~~~~l~~~~ 397 (415)
T 2hqs_A 379 VLNLVSTDGRFKARLPATD 397 (415)
T ss_dssp EEEEEETTSCCEEECCCSS
T ss_pred EEEEEECCCCcEEEeeCCC
Confidence 7999999997777776663
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.76 E-value=3.2e-07 Score=81.05 Aligned_cols=148 Identities=5% Similarity=-0.016 Sum_probs=111.3
Q ss_pred CCcEEEeecCCCeEEEEeccCceEEEEecc-C--ceEEEEEcCCe-EEEEEecCCCeeeeEEEEeecCcEEEEEEeeccc
Q 016020 197 NGKVLTYSAQDSIYKVFDLKNYTMLYSISD-K--HVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHR 272 (396)
Q Consensus 197 NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~--~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~ 272 (396)
++++++..+.++.+++||+.+.+.+..+.. . .+..+.+||+- .+++..... -.+.+|++++|+.+..+.. ++
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--~~i~~~d~~t~~~~~~~~~--~~ 85 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY--GDIYGIDLDTCKNTFHANL--SS 85 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEES--CC
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC--CcEEEEeCCCCcEEEEEEc--cc
Confidence 688888889999999999999999888875 3 58999999764 455665443 4578999999999887662 32
Q ss_pred --------CCccchhhhhcceeeEeecC------------CeeeEEEcccceEEE---ecccccCCCceEEEeecCeEEE
Q 016020 273 --------NKKVDFIEQFNEKLLVKQEN------------ENLQILDVRNAELME---VSRTEFMTPSAFIFLYENQLFL 329 (396)
Q Consensus 273 --------sk~i~FiE~~~ekLLIKQed------------~~L~I~Dv~~~ki~~---v~~t~~~~PsAFiFly~~qLFL 329 (396)
-..+.|.+ .|.+|++...+ ..|.+||+.+++..+ +... ...+.+..|.+++++|+
T Consensus 86 ~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~l~~ 163 (349)
T 1jmx_B 86 VPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGSLYV 163 (349)
T ss_dssp STTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSCEEE
T ss_pred ccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCcEEE
Confidence 24478887 89999999865 899999999955433 2222 22467777999999666
Q ss_pred EEEcCeEEEEeccc-ceeeeeccc
Q 016020 330 TFRNRTVAVWNFRG-ELVTSFEDH 352 (396)
Q Consensus 330 Tfs~gti~iWd~~g-eL~t~fedh 352 (396)
.++.|.+||... +++..+.-+
T Consensus 164 --~~~~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 164 --AGPDIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp --ESSSEEEECTTTCCEEEEECST
T ss_pred --ccCcEEEEeCCCCceecccccc
Confidence 466799999965 666666543
No 145
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.73 E-value=4e-06 Score=76.92 Aligned_cols=224 Identities=10% Similarity=0.101 Sum_probs=148.4
Q ss_pred cccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCC-------CCCCcc
Q 016020 107 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP-------DSGFAL 179 (396)
Q Consensus 107 sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~-------~~~~~L 179 (396)
.|.-..+|..||+.+-.+......-.+.|-...+.+ |++ +-. .+ . +.+..+. .|+. ..+.+-
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v-~d~--~~-~--~v~~~~~----~g~~~~~~~~~~~~~~g 136 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWV-TDV--AL-H--QVFKLDP----HSKEGPLLILGRSMQPG 136 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEE-EET--TT-T--EEEEECT----TCSSCCSEEESBTTBCC
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEE-EEC--CC-C--EEEEEeC----CCCeEEEEEecccCCCC
Confidence 456677787778777666555555677788876555 433 221 11 1 1222211 1110 000011
Q ss_pred eeecccCCCCeEEeeCCCCcEEEeec-CCCeEEEEeccCceEEEEecc------------CceEEEEEcCC-eEEEEEec
Q 016020 180 FESESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLKNYTMLYSISD------------KHVQEIKISPG-IMLLIFNR 245 (396)
Q Consensus 180 F~~~~l~~PgfVEFDd~NgkIlt~~a-~d~~YrVwdlknYs~lysIs~------------~~VqEIkiSpg-~~Ll~~q~ 245 (396)
.....+.+|--+-||+.+|.+...++ .++.+++|| .+.+.+..+.. .....|.++|+ -.|++...
T Consensus 137 ~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 137 SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 11456778999999988999999997 799999999 67888888753 23889999975 55666665
Q ss_pred CCCeeeeEEEEeecCcEEEEEEeecccCC--ccchhh-----hhcceeeEeecCCeeeEEEcccceEEEec---ccccCC
Q 016020 246 SSSHVPLKILSIEDGTVLKVFYHLLHRNK--KVDFIE-----QFNEKLLVKQENENLQILDVRNAELMEVS---RTEFMT 315 (396)
Q Consensus 246 ~~~~iplkIl~IetG~~l~s~~~~L~~sk--~i~FiE-----~~~ekLLIKQed~~L~I~Dv~~~ki~~v~---~t~~~~ 315 (396)
.. --+++|+.++|+.+..+...-+... .+.|.+ ..+...+....+..+.+||+.+++++.+. .+++..
T Consensus 216 ~~--~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~ 293 (329)
T 3fvz_A 216 EN--GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDM 293 (329)
T ss_dssp TT--TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSS
T ss_pred CC--CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCC
Confidence 53 3578999999999887642111001 133333 01111122234558999999999999875 578899
Q ss_pred CceEEEeecCeEEEEEEc-CeEEEEecccc
Q 016020 316 PSAFIFLYENQLFLTFRN-RTVAVWNFRGE 344 (396)
Q Consensus 316 PsAFiFly~~qLFLTfs~-gti~iWd~~ge 344 (396)
|.+..|.++++||++=+. +.|.+|+.+|.
T Consensus 294 p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 294 PHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred eeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 999999999999999876 89999999884
No 146
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.72 E-value=4.3e-07 Score=86.90 Aligned_cols=156 Identities=10% Similarity=0.141 Sum_probs=111.4
Q ss_pred CeEEeeCCCCcEEEeecCCC---eEEEEeccCceEEEEecc--CceEEEEEcCCe-EEEEEecCCCeeeeEEEEeecCcE
Q 016020 189 GFVEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSISD--KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 189 gfVEFDd~NgkIlt~~a~d~---~YrVwdlknYs~lysIs~--~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
-.+.|.+ +|+.+++.+.++ .+++||+++.+.. .+.. ..+..++|||+- .|++........-+.+|++.+|+.
T Consensus 182 ~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 182 MSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp EEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred eeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 4567888 888888888775 9999999998865 3433 678999999754 455455555567799999999986
Q ss_pred EEEEEeecccCC---ccchhhhhcceeeEeec-CC--eeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc---
Q 016020 263 LKVFYHLLHRNK---KVDFIEQFNEKLLVKQE-NE--NLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN--- 333 (396)
Q Consensus 263 l~s~~~~L~~sk---~i~FiE~~~ekLLIKQe-d~--~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~--- 333 (396)
.. +. .+.. .+.|.+ .+.+|++... ++ .|.+||+.+++...+.. +...+.+..|.++++.+++.+.
T Consensus 260 ~~-l~---~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 260 RQ-VT---DGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQRITW-EGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp EE-CC---CCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCEECCC-SSSEEEEEEECTTSSEEEEEEECSS
T ss_pred Ee-Cc---CCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCEEEEec-CCCcccCeEECCCCCEEEEEECcCC
Confidence 32 22 2222 378887 8999998886 44 56667999988766432 3445667889999987766664
Q ss_pred -CeEEEEecccceeeeeccc
Q 016020 334 -RTVAVWNFRGELVTSFEDH 352 (396)
Q Consensus 334 -gti~iWd~~geL~t~fedh 352 (396)
+.|.+||.++.-...+..|
T Consensus 334 ~~~i~~~d~~~~~~~~l~~~ 353 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQVLSST 353 (415)
T ss_dssp CEEEEEEETTTCCEEECCCS
T ss_pred ceEEEEEECCCCCEEEecCC
Confidence 4899999988322334444
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.68 E-value=2.2e-06 Score=77.99 Aligned_cols=152 Identities=12% Similarity=0.194 Sum_probs=103.6
Q ss_pred CCCCeEEeeCCCCc-EEEeecCCCeEEEEeccCce-------E-------EEEec-cCceEEEEEcCCe-EEEEEecCCC
Q 016020 186 KWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYT-------M-------LYSIS-DKHVQEIKISPGI-MLLIFNRSSS 248 (396)
Q Consensus 186 ~~PgfVEFDd~Ngk-Ilt~~a~d~~YrVwdlknYs-------~-------lysIs-~~~VqEIkiSpg~-~Ll~~q~~~~ 248 (396)
.||-.+.|++ +|+ +++.+..++.+++|++..-. + ...+. +.....+.|||+- .|++.....
T Consensus 155 ~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~- 232 (361)
T 3scy_A 155 PHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG- 232 (361)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-
T ss_pred CcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC-
Confidence 3567799998 676 66777778999999987543 1 22333 3678899999765 455555443
Q ss_pred eeeeEEEEeecCcEEEEEEeecccC-----CccchhhhhcceeeEeecC--CeeeEEEcc--cceEEE--ecccccCCCc
Q 016020 249 HVPLKILSIEDGTVLKVFYHLLHRN-----KKVDFIEQFNEKLLVKQEN--ENLQILDVR--NAELME--VSRTEFMTPS 317 (396)
Q Consensus 249 ~iplkIl~IetG~~l~s~~~~L~~s-----k~i~FiE~~~ekLLIKQed--~~L~I~Dv~--~~ki~~--v~~t~~~~Ps 317 (396)
-.+.+|++.+|+............ ..+.|.+ .+.+|++-..+ ..+.+||+. ++++.. ...+ ...|.
T Consensus 233 -~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 233 -GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPR 309 (361)
T ss_dssp -CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCC
T ss_pred -CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCc
Confidence 348999999886533222211111 1578888 89999887665 889999995 566433 2333 57899
Q ss_pred eEEEeecCeE-EEEEEc-CeEEEEecc
Q 016020 318 AFIFLYENQL-FLTFRN-RTVAVWNFR 342 (396)
Q Consensus 318 AFiFly~~qL-FLTfs~-gti~iWd~~ 342 (396)
.+.|.++++. +++-++ ++|.+|+.+
T Consensus 310 ~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 310 NFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999999984 444433 899997665
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.68 E-value=1e-05 Score=73.59 Aligned_cols=178 Identities=11% Similarity=0.095 Sum_probs=113.6
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEe------cc----------CceEEEEEcCCe-EEEEEecCCC
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI------SD----------KHVQEIKISPGI-MLLIFNRSSS 248 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysI------s~----------~~VqEIkiSpg~-~Ll~~q~~~~ 248 (396)
..|..+.+ + ...+++.+..++.+.+|++..-..+-.+ .+ .++..+.+||+- .|++.....
T Consensus 100 ~~p~~~~~-d-g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~- 176 (361)
T 3scy_A 100 ADPCYLTT-N-GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT- 176 (361)
T ss_dssp SCEEEEEE-C-SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT-
T ss_pred CCcEEEEE-C-CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC-
Confidence 46888888 3 2456777778999999999754333222 11 235789999765 455655443
Q ss_pred eeeeEEEEeecCcE------EEEE----EeecccCC---ccchhhhhcceeeEee-cCCeeeEEEcccceEEE-----ec
Q 016020 249 HVPLKILSIEDGTV------LKVF----YHLLHRNK---KVDFIEQFNEKLLVKQ-ENENLQILDVRNAELME-----VS 309 (396)
Q Consensus 249 ~iplkIl~IetG~~------l~s~----~~~L~~sk---~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~-----v~ 309 (396)
-.+.+|++..++. +... ...++... .+.|.+ .+.+|++-. .++.+.+||+.++++.. ..
T Consensus 177 -~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~ 254 (361)
T 3scy_A 177 -DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD 254 (361)
T ss_dssp -TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC
T ss_pred -CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC
Confidence 3578898886542 3211 22222222 277877 888888877 58899999999887743 33
Q ss_pred ccccCCCceEEEeecCe-EEEEEEc--CeEEEEecc---cc--eeeeecc-ccccC-CCCCCCc-EEEcc
Q 016020 310 RTEFMTPSAFIFLYENQ-LFLTFRN--RTVAVWNFR---GE--LVTSFED-HLLWH-PDCNTNN-IYITS 368 (396)
Q Consensus 310 ~t~~~~PsAFiFly~~q-LFLTfs~--gti~iWd~~---ge--L~t~fed-h~l~~-~~c~~n~-~~it~ 368 (396)
..++..|.+..|.++++ ||++-+. ++|.+|+++ |+ .+..+.. ..+.. ...++++ +|++.
T Consensus 255 ~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEE
T ss_pred CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEE
Confidence 44556788999999998 5666665 799999996 44 4444432 11111 1266776 55554
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.66 E-value=5.7e-06 Score=74.60 Aligned_cols=154 Identities=11% Similarity=0.109 Sum_probs=104.9
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEecc-CceEE--EE--ec-cCceEEEEEcCCe-EEEEEecCCCeeeeEEEEe
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTML--YS--IS-DKHVQEIKISPGI-MLLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlk-nYs~l--ys--Is-~~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~I 257 (396)
..+|..+.|++ +|++++.+..++.+++||+. +.+.. -. +. +.....+.+||+- .|++.....+ .+.+|++
T Consensus 140 ~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~--~v~v~~~ 216 (347)
T 3hfq_A 140 GSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS--QIASLKY 216 (347)
T ss_dssp SCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT--EEEEEEE
T ss_pred CCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC--EEEEEEe
Confidence 34677899998 77788888889999999999 55432 22 22 2467889999764 4555555433 4677888
Q ss_pred ec--CcEEEEEEeecccC--------CccchhhhhcceeeEe-ecCCeeeEEEcc-cc--eEEEecccccCCCceEEEee
Q 016020 258 ED--GTVLKVFYHLLHRN--------KKVDFIEQFNEKLLVK-QENENLQILDVR-NA--ELMEVSRTEFMTPSAFIFLY 323 (396)
Q Consensus 258 et--G~~l~s~~~~L~~s--------k~i~FiE~~~ekLLIK-Qed~~L~I~Dv~-~~--ki~~v~~t~~~~PsAFiFly 323 (396)
.. |+............ ..+.|.+ .|.+|++- ..+..|.+||+. ++ +.+....++...|..+.|.+
T Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 217 DTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp ETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT
T ss_pred cCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC
Confidence 84 65432222111111 1277887 88888665 457899999997 33 44445556677899999999
Q ss_pred cCe-EEEEEEc-CeEEEEecc
Q 016020 324 ENQ-LFLTFRN-RTVAVWNFR 342 (396)
Q Consensus 324 ~~q-LFLTfs~-gti~iWd~~ 342 (396)
+++ |+++-++ ++|.+|+.+
T Consensus 296 dg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 296 TEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEEcCCCcEEEEEEe
Confidence 997 5665555 899999554
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.63 E-value=1.1e-07 Score=93.26 Aligned_cols=230 Identities=13% Similarity=0.094 Sum_probs=138.9
Q ss_pred hhhhhhc-cccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeE-ecCCCceeeeEeeehhhhhhCCCCCCC
Q 016020 100 IVFALAH-SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVY-ASDNFSSLKCRSTKIEYIRRGKPDSGF 177 (396)
Q Consensus 100 ii~~L~~-sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~-~sd~~s~L~cr~~~~~~i~~gk~~~~~ 177 (396)
.|+.... .|....|+..+|+..... ..+..-++++.+..+ .++.++.. ..+. ..+-..++.. ..|+ ..
T Consensus 35 ~la~~s~~~g~~~lw~~~~g~~~~lt-~~~~~~~~~~~~spd--~~l~~~~~~~g~~--~~~l~~~~~~--~~g~---~~ 104 (582)
T 3o4h_A 35 KLLVVGFSEGSVNAYLYDGGETVKLN-REPINSVLDPHYGVG--RVILVRDVSKGAE--QHALFKVNTS--RPGE---EQ 104 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEECC-SSCCSEECEECTTCS--EEEEEEECSTTSC--CEEEEEEETT--STTC---CE
T ss_pred eEEEEEccCCceeEEEEcCCCcEeee-cccccccccccCCCC--eEEEEeccCCCCc--ceEEEEEecc--CCCc---cc
Confidence 3333333 778888887666655443 333346778888753 55554422 1222 1222222210 0111 11
Q ss_pred cceeecccCCCCeEEeeCC-CCcEEEeecCCCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEE-Ee-cCCCeeeeEE
Q 016020 178 ALFESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLI-FN-RSSSHVPLKI 254 (396)
Q Consensus 178 ~LF~~~~l~~PgfVEFDd~-NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~-~q-~~~~~iplkI 254 (396)
.|....... ...|.+- ++.+++....+..+ +||+.+.+..--..... .++.+||+--.++ .. ...+..-+.+
T Consensus 105 ~l~~~~~~~---~~~~s~dg~~~~~~s~~~~~~~-l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 105 RLEAVKPMR---ILSGVDTGEAVVFTGATEDRVA-LYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp ECTTSCSBE---EEEEEECSSCEEEEEECSSCEE-EEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred cccCCCCce---eeeeCCCCCeEEEEecCCCCce-EEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 121111111 2344431 34455555555555 99999987433333333 8999995443333 32 2234466999
Q ss_pred EEeecCcEEEEEEeecccC---CccchhhhhcceeeEeecCC--eeeEEEcccceEEEecccccCCCceEE--------E
Q 016020 255 LSIEDGTVLKVFYHLLHRN---KKVDFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSRTEFMTPSAFI--------F 321 (396)
Q Consensus 255 l~IetG~~l~s~~~~L~~s---k~i~FiE~~~ekLLIKQed~--~L~I~Dv~~~ki~~v~~t~~~~PsAFi--------F 321 (396)
||+++|+... +. .+. ..+.|.+ .|..|+....++ .|.+||+.+++.. +...+...+.+.. |
T Consensus 180 ~d~~~g~~~~-l~---~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 180 SNLSSGGLRV-FD---SGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EETTTCCCEE-EC---CSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE
T ss_pred EcCCCCCceE-ee---cCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE
Confidence 9999998653 22 222 3488988 999999777777 8999999999998 7777766777777 9
Q ss_pred eecCeEEEEEEc-CeEEEEecccceeeeecc
Q 016020 322 LYENQLFLTFRN-RTVAVWNFRGELVTSFED 351 (396)
Q Consensus 322 ly~~qLFLTfs~-gti~iWd~~geL~t~fed 351 (396)
+++++++++.+. |++.+|+. |+++....+
T Consensus 254 spdg~~~~~~~~~g~~~l~~~-g~~~~~~~~ 283 (582)
T 3o4h_A 254 LPDGRLAVVARREGRSAVFID-GERVEAPQG 283 (582)
T ss_dssp CTTSCEEEEEEETTEEEEEET-TEEECCCSS
T ss_pred cCCCcEEEEEEcCCcEEEEEE-CCeeccCCC
Confidence 999988777765 99999999 876544443
No 151
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.61 E-value=7.3e-06 Score=75.77 Aligned_cols=241 Identities=10% Similarity=-0.001 Sum_probs=154.8
Q ss_pred EEEeeccc-hhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEe-EecCCCceeeeEeeehhhhh
Q 016020 92 IEIVAARD-IVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSV-YASDNFSSLKCRSTKIEYIR 169 (396)
Q Consensus 92 ~EIv~a~d-ii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv-~~sd~~s~L~cr~~~~~~i~ 169 (396)
..|....+ +.++-..+|.-.++|..|++.+-.+- ...-.+.|.....+ .+ .||. + + ..+ ..++.+
T Consensus 47 ~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~--~~~~p~~i~~~~~g-~l-yv~~~~---~-~~v--~~iD~~--- 113 (328)
T 3dsm_A 47 QSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT--GFTSPRYIHFLSDE-KA-YVTQIW---D-YRI--FIINPK--- 113 (328)
T ss_dssp EEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE--CCSSEEEEEEEETT-EE-EEEEBS---C-SEE--EEEETT---
T ss_pred eEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC--CCCCCcEEEEeCCC-eE-EEEECC---C-CeE--EEEECC---
Confidence 34444434 44444457889999999999887773 23446677775444 43 4333 2 1 111 122111
Q ss_pred hCCCCCCCcce-eecccCCCCeEEeeCCCCcEEEeec-CCCeEEEEeccCceEEEEecc-CceEEEEEcC-CeEEEEEec
Q 016020 170 RGKPDSGFALF-ESESLKWPGFVEFDDVNGKVLTYSA-QDSIYKVFDLKNYTMLYSISD-KHVQEIKISP-GIMLLIFNR 245 (396)
Q Consensus 170 ~gk~~~~~~LF-~~~~l~~PgfVEFDd~NgkIlt~~a-~d~~YrVwdlknYs~lysIs~-~~VqEIkiSp-g~~Ll~~q~ 245 (396)
.+++....++= ......+|.-+.+| ++++...+. .++.+.|||+++.+.+-+|.- .....|.++| |-+++....
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC
T ss_pred CCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC
Confidence 11110000000 01122378888885 588888876 489999999999999888875 6678899997 554433333
Q ss_pred CCC-------eeeeEEEEeecCcEEEEEEeecc-cCCccchhhhhcceeeEeecCCeeeEEEcccceEEEe--cccccCC
Q 016020 246 SSS-------HVPLKILSIEDGTVLKVFYHLLH-RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV--SRTEFMT 315 (396)
Q Consensus 246 ~~~-------~iplkIl~IetG~~l~s~~~~L~-~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v--~~t~~~~ 315 (396)
... .-.+.++|.++|+....+...-. +-..+.|.+ .+..|++-.. .+.+||..++++... .......
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~ 268 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTK 268 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCc
Confidence 211 14588999999998877652111 223477766 6788888654 899999999987432 1222567
Q ss_pred CceEEEee-cCeEEEEE----E-cCeEEEEecccceeeeec
Q 016020 316 PSAFIFLY-ENQLFLTF----R-NRTVAVWNFRGELVTSFE 350 (396)
Q Consensus 316 PsAFiFly-~~qLFLTf----s-~gti~iWd~~geL~t~fe 350 (396)
|....+.+ ++.||++- + +++|.+||.+|+++.+++
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~ 309 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFY 309 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEE
Confidence 99999997 89999996 3 599999999999888775
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.59 E-value=6e-07 Score=76.12 Aligned_cols=174 Identities=10% Similarity=0.075 Sum_probs=110.2
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccC-ceEEEEecc---CceEEEEEcCCeEEEEEecC--CCeeeeEEEEeecCc
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKN-YTMLYSISD---KHVQEIKISPGIMLLIFNRS--SSHVPLKILSIEDGT 261 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlkn-Ys~lysIs~---~~VqEIkiSpg~~Ll~~q~~--~~~iplkIl~IetG~ 261 (396)
..-+.|++ +|+.+++.. ++.+++||+.+ .+....... ..+..+++||+--.+++... ....-+.++++.+|+
T Consensus 44 v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 44 FEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp CEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC
T ss_pred eEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc
Confidence 34567887 788888765 88999999999 665444332 56788999977655555552 234455555555665
Q ss_pred EEEEEEeecccCCccchhhhhcceee-EeecCCeeeEEEc--ccceEEEecccccCCCceEEEeecCeEEEEEE--cCeE
Q 016020 262 VLKVFYHLLHRNKKVDFIEQFNEKLL-VKQENENLQILDV--RNAELMEVSRTEFMTPSAFIFLYENQLFLTFR--NRTV 336 (396)
Q Consensus 262 ~l~s~~~~L~~sk~i~FiE~~~ekLL-IKQed~~L~I~Dv--~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs--~gti 336 (396)
. ..+.. ......+.|.+ .+.+|+ ....+..++||++ .+++...+ ..+...+..+.|.++++.++..+ ++.+
T Consensus 122 ~-~~~~~-~~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 122 P-RLMTK-NLPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRL-THGEGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp C-EECCS-SSSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEEC-CCSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred e-EEeec-CCCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEc-ccCCCccccceECCCCCEEEEEecCCCCc
Confidence 3 22221 01112256766 788887 6778899999996 44555443 44556788899999998655544 5899
Q ss_pred EEEecc--cceeeeeccccccC---CCCCCCcEEEc
Q 016020 337 AVWNFR--GELVTSFEDHLLWH---PDCNTNNIYIT 367 (396)
Q Consensus 337 ~iWd~~--geL~t~fedh~l~~---~~c~~n~~~it 367 (396)
.+|+++ +..+..+..|.... ...++++.+++
T Consensus 198 ~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 198 QIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp EEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEE
T ss_pred cEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEE
Confidence 999986 44555555443211 11456654433
No 153
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.58 E-value=2.3e-06 Score=79.23 Aligned_cols=177 Identities=11% Similarity=0.076 Sum_probs=118.2
Q ss_pred cCCCCeEEeeCCCCcEE-EeecCCCeEEEEecc-CceE--EEEec----cCceEEEEEcCCe-EEEEEecCCCeeeeEEE
Q 016020 185 LKWPGFVEFDDVNGKVL-TYSAQDSIYKVFDLK-NYTM--LYSIS----DKHVQEIKISPGI-MLLIFNRSSSHVPLKIL 255 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIl-t~~a~d~~YrVwdlk-nYs~--lysIs----~~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl 255 (396)
-.+|..+.|++ +|+.+ +.+..++.+++||+. +.+. +..+. +..+..+.|||+- .|.+.....+ .+.+|
T Consensus 144 ~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~--~v~v~ 220 (365)
T 1jof_A 144 NTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN--RICEY 220 (365)
T ss_dssp TCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT--EEEEE
T ss_pred CCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC--eEEEE
Confidence 35788899998 67644 445567899999998 6653 44553 4679999999754 5555554434 45677
Q ss_pred Eee--cCcEEE---EEEeeccc--------------CCccc-hhhhhcceeeEeecCC------eeeEEEcc-cceEEEe
Q 016020 256 SIE--DGTVLK---VFYHLLHR--------------NKKVD-FIEQFNEKLLVKQENE------NLQILDVR-NAELMEV 308 (396)
Q Consensus 256 ~Ie--tG~~l~---s~~~~L~~--------------sk~i~-FiE~~~ekLLIKQed~------~L~I~Dv~-~~ki~~v 308 (396)
++. +|+... .+. .++. -..+. |.+ .|.+|++-..+. .|++||+. ++++..+
T Consensus 221 ~~~~~~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~ 298 (365)
T 1jof_A 221 VIDPATHMPVYTHHSFP-LIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ 298 (365)
T ss_dssp EECTTTCCEEEEEEEEE-SSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE
T ss_pred EEeCCCCcEEEccceEE-cCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEe
Confidence 664 687543 122 2221 12377 665 899998877544 79999996 7887763
Q ss_pred ---cccccCCCceEEEee---cCe-EEEEEEc-CeEEEEecccceeeeeccccccCCCCCCCcEEE
Q 016020 309 ---SRTEFMTPSAFIFLY---ENQ-LFLTFRN-RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI 366 (396)
Q Consensus 309 ---~~t~~~~PsAFiFly---~~q-LFLTfs~-gti~iWd~~geL~t~fedh~l~~~~c~~n~~~i 366 (396)
..++...|.++.|.+ +++ |+++-.+ ++|.+|+.+++..+....-....|-|..|-+|+
T Consensus 299 ~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~~~~~~~~~~p~~~~~~~~~ 364 (365)
T 1jof_A 299 LFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGMNAIWY 364 (365)
T ss_dssp EEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEEEEEEEE
T ss_pred eeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCceeeEEEcCCCcceeeeEec
Confidence 334566799999999 565 4555444 899999999864443333334456788887765
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.53 E-value=6.9e-07 Score=89.21 Aligned_cols=174 Identities=11% Similarity=0.128 Sum_probs=120.2
Q ss_pred CeEEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEE
Q 016020 189 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 189 gfVEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~ 264 (396)
.-+.|++ +|+.|++.+. +.+++||+.+.. .+..+.. ..+..++|||+--.+++.... -+.+|++.+|+...
T Consensus 112 ~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~---~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 112 VDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR---NLWVIDLASGRQMQ 186 (741)
T ss_dssp CCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT---EEEEEETTTTEEEE
T ss_pred ceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC---cEEEEecCCCCEEE
Confidence 4567888 7887777665 999999999872 3334444 679999999876555555442 68999999988764
Q ss_pred EEEeeccc------------------CCccchhhhhcceeeEeecCC---------------------------------
Q 016020 265 VFYHLLHR------------------NKKVDFIEQFNEKLLVKQENE--------------------------------- 293 (396)
Q Consensus 265 s~~~~L~~------------------sk~i~FiE~~~ekLLIKQed~--------------------------------- 293 (396)
.+.. +. ...+.|.+ .|.+|++-..|+
T Consensus 187 ~~~~--~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 187 LTAD--GSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp CCCC--CCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred eccC--CccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 3321 11 13478888 899999987655
Q ss_pred eeeEEEccc-ceEEEeccc--ccCCCceEEEeecCeEEEEEE------cCeEEEEeccc-ceeeeecccc-ccC------
Q 016020 294 NLQILDVRN-AELMEVSRT--EFMTPSAFIFLYENQLFLTFR------NRTVAVWNFRG-ELVTSFEDHL-LWH------ 356 (396)
Q Consensus 294 ~L~I~Dv~~-~ki~~v~~t--~~~~PsAFiFly~~qLFLTfs------~gti~iWd~~g-eL~t~fedh~-l~~------ 356 (396)
.|.+||+.+ +++..+... +...+....| ++++.+++.+ ++.|.+||.++ ++...++.|. .|.
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 789999999 988776543 5566778889 9988766554 35799999987 5555554443 221
Q ss_pred CCCCCCcEEEccCCc
Q 016020 357 PDCNTNNIYITSDQD 371 (396)
Q Consensus 357 ~~c~~n~~~it~~qd 371 (396)
...++++++++++.|
T Consensus 343 ~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 343 RFLDDGSILWSSERT 357 (741)
T ss_dssp EECTTSCEEEEECTT
T ss_pred EECCCCeEEEEecCC
Confidence 115666666665554
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.52 E-value=7.9e-07 Score=88.29 Aligned_cols=158 Identities=10% Similarity=0.006 Sum_probs=109.4
Q ss_pred CCCeEEeeCCCCcEEEeecCC---------CeEEEEeccCceEEEEecc-----CceEEEEEcCCeEEEEEecCCCeeee
Q 016020 187 WPGFVEFDDVNGKVLTYSAQD---------SIYKVFDLKNYTMLYSISD-----KHVQEIKISPGIMLLIFNRSSSHVPL 252 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d---------~~YrVwdlknYs~lysIs~-----~~VqEIkiSpg~~Ll~~q~~~~~ipl 252 (396)
+...+.|.+ +|+.|++...+ +.+.+||+.+.+. ..+.. ..+..++|||+--.+++... --+
T Consensus 62 ~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~---~~i 136 (723)
T 1xfd_A 62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE---NNI 136 (723)
T ss_dssp TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET---TEE
T ss_pred ccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC---CeE
Confidence 356788988 78888877664 7888999999875 44443 12889999976533344333 268
Q ss_pred EEEEeecCcEEEEEEeecc------------------cCCccchhhhhcceeeEeecCC---------------------
Q 016020 253 KILSIEDGTVLKVFYHLLH------------------RNKKVDFIEQFNEKLLVKQENE--------------------- 293 (396)
Q Consensus 253 kIl~IetG~~l~s~~~~L~------------------~sk~i~FiE~~~ekLLIKQed~--------------------- 293 (396)
.+|++.+|+....+..--. +...+.|.+ .|++|+....++
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 9999999988664431000 113478888 899999887553
Q ss_pred -------------eeeEEEcccceEEEecccc------cCCCceEEEeecCeEEEEEEc-----CeEEEEeccc-ceeee
Q 016020 294 -------------NLQILDVRNAELMEVSRTE------FMTPSAFIFLYENQLFLTFRN-----RTVAVWNFRG-ELVTS 348 (396)
Q Consensus 294 -------------~L~I~Dv~~~ki~~v~~t~------~~~PsAFiFly~~qLFLTfs~-----gti~iWd~~g-eL~t~ 348 (396)
.|.+||+.+++.......+ .....+..|+++++++++.++ ..|.+||+.+ ++...
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred ccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 7999999999863333222 344567889999998767654 4799999976 55554
Q ss_pred ec
Q 016020 349 FE 350 (396)
Q Consensus 349 fe 350 (396)
++
T Consensus 296 ~~ 297 (723)
T 1xfd_A 296 HE 297 (723)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 156
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.50 E-value=1.4e-05 Score=70.36 Aligned_cols=186 Identities=12% Similarity=0.218 Sum_probs=127.1
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--------CceEEEEE-cCCeEEEEEecCCCeeeeE
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--------KHVQEIKI-SPGIMLLIFNRSSSHVPLK 253 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--------~~VqEIki-Spg~~Ll~~q~~~~~iplk 253 (396)
..+..|.-+-+|+ +|++...+..++.+.+||.. .+.+..+.. ..+..|.+ .++-.|++.... ..--+.
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-PTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-GGCEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-CCCEEE
Confidence 4567899999998 68899888889999999987 566666643 46889999 344444444421 123578
Q ss_pred EEEeecCcEEEEEEeecccC---CccchhhhhcceeeEe-ecCCeeeEEEcccceEEEecc-cccCCCceEEEeecCeEE
Q 016020 254 ILSIEDGTVLKVFYHLLHRN---KKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSR-TEFMTPSAFIFLYENQLF 328 (396)
Q Consensus 254 Il~IetG~~l~s~~~~L~~s---k~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~-t~~~~PsAFiFly~~qLF 328 (396)
+|+ .+|+.+..+.. ... ..+.|.+ .+. |++- ..+..|.+||.....+..... .+...|.+..|.+++++|
T Consensus 104 ~~d-~~g~~~~~~~~--~~~~~~~~i~~~~-~g~-l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGA--TILQHPRGVTVDN-KGR-IIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp EEC-TTSCEEEEECT--TTCSCEEEEEECT-TSC-EEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred EEC-CCCcEEEEecC--ccCCCceEEEEeC-CCC-EEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 888 78888776541 221 2255555 454 6655 467889999965443333322 456789999999999999
Q ss_pred EEEE-cCeEEEEecccceeeeecccc-ccCCC----CCCCcEEEccCCc--EEEEe
Q 016020 329 LTFR-NRTVAVWNFRGELVTSFEDHL-LWHPD----CNTNNIYITSDQD--LIISY 376 (396)
Q Consensus 329 LTfs-~gti~iWd~~geL~t~fedh~-l~~~~----c~~n~~~it~~qd--~ii~~ 376 (396)
++-+ ++.|.+||.+|+.+..+..+- +..|. -+++++|++...+ -|..|
T Consensus 179 v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp EEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 9876 489999999998777664431 12222 4578889887654 45444
No 157
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.50 E-value=1.7e-05 Score=69.76 Aligned_cols=180 Identities=11% Similarity=0.206 Sum_probs=122.8
Q ss_pred ccCCCCeEEeeCCCCcEEEeecC-CCeEEEEeccCceEEEEecc---CceEEEEEcCCeEEEEEecCCCeeeeEEEEeec
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIED 259 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~-d~~YrVwdlknYs~lysIs~---~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~Iet 259 (396)
.+..|--+-||+.+|++.+.+.. ++.+++|| .+.+.+..+.. ..+..|.++|+=.+++..... -.+.+|+ .+
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--~~i~~~~-~~ 150 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV--MRVIIFD-QN 150 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT--TEEEEEC-TT
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC--CEEEEEc-CC
Confidence 45678889997668998887754 88999999 67777777753 578999998654555655442 3567788 46
Q ss_pred CcEEEEEEee--cccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecc-cccCCCceEEEeecCeEEEEEEc-C-
Q 016020 260 GTVLKVFYHL--LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR-TEFMTPSAFIFLYENQLFLTFRN-R- 334 (396)
Q Consensus 260 G~~l~s~~~~--L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~-t~~~~PsAFiFly~~qLFLTfs~-g- 334 (396)
|+.+..+... +..-..|.|-+ .+..++....+..|.+||.....+..+.. .+...|.+..|.++++||++-+. +
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~ 229 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNF 229 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSC
T ss_pred CCEEEEeCCCCccCCcEEEEECC-CCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCE
Confidence 7777665421 01112255555 45544444678899999985544444432 33578999999999999999876 4
Q ss_pred eEEEEecccceeeeeccccccC-CC----CCCCcEEEcc
Q 016020 335 TVAVWNFRGELVTSFEDHLLWH-PD----CNTNNIYITS 368 (396)
Q Consensus 335 ti~iWd~~geL~t~fedh~l~~-~~----c~~n~~~it~ 368 (396)
.|.+||.+|+.+..+..+.... |. .+++++|+|.
T Consensus 230 ~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 230 NLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 9999999998777776654321 11 3567788774
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.50 E-value=1.4e-06 Score=86.67 Aligned_cols=149 Identities=11% Similarity=0.053 Sum_probs=108.1
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeec-----
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIED----- 259 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~Iet----- 259 (396)
..+..+.|++- ++++.. .++.+++||+.+.+....... ..+..++|||+--.+++... --+.+|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~--~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~---~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF--TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRN---HNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEE--ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEET---TEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEE--ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEEC---CeEEEEecCcccccC
Confidence 45778999985 666654 469999999999876544433 67899999976544444332 4689999999
Q ss_pred CcEEEEEEeecccC----------------CccchhhhhcceeeEee---------------------------------
Q 016020 260 GTVLKVFYHLLHRN----------------KKVDFIEQFNEKLLVKQ--------------------------------- 290 (396)
Q Consensus 260 G~~l~s~~~~L~~s----------------k~i~FiE~~~ekLLIKQ--------------------------------- 290 (396)
|+....+.. +.. ..+.|.+ .|.+|++.+
T Consensus 156 g~~~~~~~~--~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 156 SRAIAVTID--GTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp CCCEESCSC--CBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred CCcEEeccC--CCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 876643221 222 4577888 899999987
Q ss_pred cCCeeeEEEcccceEEEecc--cccCCCceEEEeecCeEEEE-EEcC-----eEEEEeccc
Q 016020 291 ENENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLT-FRNR-----TVAVWNFRG 343 (396)
Q Consensus 291 ed~~L~I~Dv~~~ki~~v~~--t~~~~PsAFiFly~~qLFLT-fs~g-----ti~iWd~~g 343 (396)
.+..|.+||+.+++...+.. .+...+..+.|+++++.+++ -.++ +|.+||..+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC
Confidence 34679999999999877653 34456788999999985544 4455 999999976
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.45 E-value=2.3e-07 Score=92.72 Aligned_cols=177 Identities=13% Similarity=0.163 Sum_probs=118.8
Q ss_pred CCeEEeeCCCCcEEEeecC---------CCeEEEEeccCceEE--EEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEE
Q 016020 188 PGFVEFDDVNGKVLTYSAQ---------DSIYKVFDLKNYTML--YSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~---------d~~YrVwdlknYs~l--ysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~ 256 (396)
..-+.|.+ +|+.|++.+. ++.+++||+.+.+.+ ..+. ..+..++|||+--.+++... --+.+|+
T Consensus 62 ~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-~~~~~~~~SPDG~~la~~~~---~~i~~~~ 136 (719)
T 1z68_A 62 ASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-RPIQYLCWSPVGSKLAYVYQ---NNIYLKQ 136 (719)
T ss_dssp CSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-SSBCCEEECSSTTCEEEEET---TEEEEES
T ss_pred eeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC-cccccceECCCCCEEEEEEC---CeEEEEe
Confidence 34677887 8888887766 789999999998863 4454 57899999986544455443 3799999
Q ss_pred eecCcEEEEEEee------------------cccCCccchhhhhcceeeEeecCC-------------------------
Q 016020 257 IEDGTVLKVFYHL------------------LHRNKKVDFIEQFNEKLLVKQENE------------------------- 293 (396)
Q Consensus 257 IetG~~l~s~~~~------------------L~~sk~i~FiE~~~ekLLIKQed~------------------------- 293 (396)
+.+|+...-+..- +.+...+.|.+ .|++|+....|+
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 9999875422100 01113588888 899999877542
Q ss_pred ---------eeeEEEcccceEE---Eecc-----cccCCCceEEEeecCeEEEEEEcC-----eEEEEe----ccc-cee
Q 016020 294 ---------NLQILDVRNAELM---EVSR-----TEFMTPSAFIFLYENQLFLTFRNR-----TVAVWN----FRG-ELV 346 (396)
Q Consensus 294 ---------~L~I~Dv~~~ki~---~v~~-----t~~~~PsAFiFly~~qLFLTfs~g-----ti~iWd----~~g-eL~ 346 (396)
.|.+||+.+++.+ .+.. ++........|++++++.++..++ .|.+|| ..+ +..
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred CCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 7889999998863 4422 344455778899999987776553 378888 554 555
Q ss_pred eee----ccccccCC--------CCCCCc--EEEccCC
Q 016020 347 TSF----EDHLLWHP--------DCNTNN--IYITSDQ 370 (396)
Q Consensus 347 t~f----edh~l~~~--------~c~~n~--~~it~~q 370 (396)
..+ +.|--|.. ..++++ +|++++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 296 KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred EEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 545 45555543 256666 4444433
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.43 E-value=3.2e-06 Score=82.80 Aligned_cols=171 Identities=8% Similarity=0.067 Sum_probs=106.4
Q ss_pred EEeeCCCCcEEEeecC-CCeEEEEeccCceEEEEecc---CceEEEEEcCCeEEEEEecC-CCeeeeEEEEeec---CcE
Q 016020 191 VEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSISD---KHVQEIKISPGIMLLIFNRS-SSHVPLKILSIED---GTV 262 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~-d~~YrVwdlknYs~lysIs~---~~VqEIkiSpg~~Ll~~q~~-~~~iplkIl~Iet---G~~ 262 (396)
|-|.+ .|+.||+.+. |+.++||++.+.+ ...+.. ..+..+.+||+ .+++.... ...-...||.+.. |+.
T Consensus 27 ~~~~~-DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~ 103 (582)
T 3o4h_A 27 LQGVV-DGDKLLVVGFSEGSVNAYLYDGGE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE 103 (582)
T ss_dssp EEEEE-TTTEEEEEEEETTEEEEEEEETTE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC
T ss_pred eecCC-CCCeEEEEEccCCceeEEEEcCCC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc
Confidence 45666 7899998777 9999999996655 455654 36899999999 55444432 2333456666554 433
Q ss_pred EEEEEeecccCCccchhhhhcce-eeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-----CeE
Q 016020 263 LKVFYHLLHRNKKVDFIEQFNEK-LLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-----RTV 336 (396)
Q Consensus 263 l~s~~~~L~~sk~i~FiE~~~ek-LLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-----gti 336 (396)
. .+.. .+...-..|.+ .++. +++...+..+.|||+.++++..+..... .++.|+++++..++.++ ++|
T Consensus 104 ~-~l~~-~~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i 177 (582)
T 3o4h_A 104 Q-RLEA-VKPMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSL 177 (582)
T ss_dssp E-ECTT-SCSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEE
T ss_pred c-cccC-CCCceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEE
Confidence 3 2110 01111245555 5554 3444455556699999999888765443 78999999998775554 579
Q ss_pred EEEeccc-ceeeeeccccccC---CCCCCCcEEEccCCc
Q 016020 337 AVWNFRG-ELVTSFEDHLLWH---PDCNTNNIYITSDQD 371 (396)
Q Consensus 337 ~iWd~~g-eL~t~fedh~l~~---~~c~~n~~~it~~qd 371 (396)
.+||+++ ++. .+.+|.-+. ...||++.+.+++.|
T Consensus 178 ~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~ 215 (582)
T 3o4h_A 178 FTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETA 215 (582)
T ss_dssp EEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECS
T ss_pred EEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCC
Confidence 9999876 433 444443221 126777766555544
No 161
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.42 E-value=3.2e-06 Score=84.11 Aligned_cols=147 Identities=14% Similarity=0.076 Sum_probs=87.3
Q ss_pred CCCCCCCcceeeccc---CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEE-EEecc-------------------C
Q 016020 171 GKPDSGFALFESESL---KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSISD-------------------K 227 (396)
Q Consensus 171 gk~~~~~~LF~~~~l---~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~l-ysIs~-------------------~ 227 (396)
|.+-.|-.++.+..- .-|.+. |.-+++...++ + +||+++.+.+ ..+.+ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~w~------g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 82 (706)
T 2z3z_A 11 GSLMPGGKEFYNFYPEYVVGLQWM------GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAF 82 (706)
T ss_dssp -----------------CTTCEEE------TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------C
T ss_pred ccccCCcccccccccccCCCCcCc------CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhcccccccc
Confidence 444444445555443 334555 33455555677 6 9999999773 33322 3
Q ss_pred ceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEccc-----
Q 016020 228 HVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN----- 302 (396)
Q Consensus 228 ~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~----- 302 (396)
.|..+.+||+-.+++.. . -.+.+||+.+|+......+ -..-..+.|.+ .|++|+.- .+..|.+||+.+
T Consensus 83 ~v~~~~~spd~~~~~~~-~---~~i~~~d~~~~~~~~l~~~-~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFT-Q---GGLVGFDMLARKVTYLFDT-NEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCEEEEETTTTEEEEEE-T---TEEEEEETTTTEEEEEECC-TTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCC
T ss_pred CceeEEECCCCeEEEEE-C---CEEEEEECCCCceEEccCC-cccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccC
Confidence 69999999984444442 2 6789999999976554331 11223488888 89999984 678999999999
Q ss_pred ceEEEecccccC--------------CCceEEEeecCeEEEEEE
Q 016020 303 AELMEVSRTEFM--------------TPSAFIFLYENQLFLTFR 332 (396)
Q Consensus 303 ~ki~~v~~t~~~--------------~PsAFiFly~~qLFLTfs 332 (396)
++...+...... .+.++.|+++++.+++.+
T Consensus 156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 888875444433 258999999999877765
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.42 E-value=1.1e-06 Score=87.87 Aligned_cols=155 Identities=11% Similarity=0.094 Sum_probs=105.1
Q ss_pred eehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccC-----ceEEEEEcCC
Q 016020 163 TKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-----HVQEIKISPG 237 (396)
Q Consensus 163 ~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~-----~VqEIkiSpg 237 (396)
+++++|-.++.... .| -+.|.+ +|++++.+ .|+.+++||+.+.+...-+... .+..+++||+
T Consensus 4 ~~~~~~~~~~~~~~----------~~-~~~~s~-dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpD 70 (719)
T 1z68_A 4 LTLKDILNGTFSYK----------TF-FPNWIS-GQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPD 70 (719)
T ss_dssp CCHHHHHHTTTCCC----------CC-CCEESS-SSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTT
T ss_pred ccHHHHhcCcccCC----------CC-ccEECC-CCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCC
Confidence 45677776653211 12 345665 56666544 6999999999999977666552 3899999976
Q ss_pred eEEEEEecC-------CCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecc
Q 016020 238 IMLLIFNRS-------SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR 310 (396)
Q Consensus 238 ~~Ll~~q~~-------~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~ 310 (396)
--.|++... ...-.+.||++++|+.+....+ -..-..+.|.+ .|++|+.-. +..|.+||+.+++...+..
T Consensus 71 g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~ 147 (719)
T 1z68_A 71 RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITF 147 (719)
T ss_dssp SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCC
T ss_pred CCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEec
Confidence 554444433 2257899999999987321111 12234478888 899999886 5699999999998877543
Q ss_pred ccc------------------CCCceEEEeecCeEEEEEEc
Q 016020 311 TEF------------------MTPSAFIFLYENQLFLTFRN 333 (396)
Q Consensus 311 t~~------------------~~PsAFiFly~~qLFLTfs~ 333 (396)
... ....++-|+++++.+++.+.
T Consensus 148 ~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 148 NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 221 12258999999988776664
No 163
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.41 E-value=1.1e-05 Score=74.11 Aligned_cols=180 Identities=7% Similarity=0.011 Sum_probs=128.4
Q ss_pred CcEEEeecCCCeEEEEeccCceEEEEeccC---ceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCC
Q 016020 198 GKVLTYSAQDSIYKVFDLKNYTMLYSISDK---HVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNK 274 (396)
Q Consensus 198 gkIlt~~a~d~~YrVwdlknYs~lysIs~~---~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk 274 (396)
|++++..+.++.+.+||.++.+.+.++... .+.++.++|+=.+++.. . --+..||. +|+.+-.+.. +...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~-~---~~V~~~d~-~G~~~W~~~~--~~~~ 77 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-S---KGAKMITR-DGRELWNIAA--PAGC 77 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC-B---SEEEEECT-TSCEEEEEEC--CTTC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC-C---CCEEEECC-CCCEEEEEcC--CCCc
Confidence 688999999999999999999999999874 58999999776666632 2 23788998 8999988873 2111
Q ss_pred ---ccchhhhhcceeeEeec-CCeeeEEEcccceEEE-ec-----ccccCCCceEEEeecCeEEEEEEc-CeEEEEeccc
Q 016020 275 ---KVDFIEQFNEKLLVKQE-NENLQILDVRNAELME-VS-----RTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 275 ---~i~FiE~~~ekLLIKQe-d~~L~I~Dv~~~ki~~-v~-----~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g 343 (396)
.+++++ .|..|+.-.. +..+..+|- +++++. .. ......|...-++++++++++.+. +.|..||.+|
T Consensus 78 ~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G 155 (276)
T 3no2_A 78 EMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNG 155 (276)
T ss_dssp EEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTS
T ss_pred cccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCC
Confidence 256666 6777777666 778888885 666554 22 123356666778899999988875 8999999999
Q ss_pred ceeeeecccc-c-cCCCCCCCcEEEccCCc-EEEEeccCCCCCccc
Q 016020 344 ELVTSFEDHL-L-WHPDCNTNNIYITSDQD-LIISYCKAEPEDQWM 386 (396)
Q Consensus 344 eL~t~fedh~-l-~~~~c~~n~~~it~~qd-~ii~~~~~~~~~~~~ 386 (396)
+++-.+..+. + -.+--++++++|+...+ -|+.+=...+.--|.
T Consensus 156 ~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 156 QLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRR 201 (276)
T ss_dssp CEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEE
T ss_pred CEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEE
Confidence 9888777542 1 12335666777655443 566665554555454
No 164
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.39 E-value=3.1e-06 Score=84.57 Aligned_cols=139 Identities=12% Similarity=0.121 Sum_probs=101.2
Q ss_pred cCCCCeEEeeCCCCcEEEeecC-CC-----eEEEEeccCceEEEEecc--------------------------CceEEE
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQ-DS-----IYKVFDLKNYTMLYSISD--------------------------KHVQEI 232 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~-d~-----~YrVwdlknYs~lysIs~--------------------------~~VqEI 232 (396)
...+..+.|.+ +|+.|++.+. |+ .+++||+.+.+..-.+.. ..|..+
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 44567788988 8998888777 87 999999999986655543 237899
Q ss_pred EEcCCeEEEEEecCCCeeeeEEEEeecC---cEEEEEEeecccC---CccchhhhhcceeeEeecCCeeeEEEcccceEE
Q 016020 233 KISPGIMLLIFNRSSSHVPLKILSIEDG---TVLKVFYHLLHRN---KKVDFIEQFNEKLLVKQENENLQILDVRNAELM 306 (396)
Q Consensus 233 kiSpg~~Ll~~q~~~~~iplkIl~IetG---~~l~s~~~~L~~s---k~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~ 306 (396)
.|||+--.|++... -.+.+|++.+| +.. .+. .+. ..+.|.+ .|++|+...++ .|.+||+.+++..
T Consensus 115 ~~SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~-~l~---~~~~~~~~~~~SP-DG~~la~~~~~-~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG---GELYLYDLKQEGKAAVR-QLT---HGEGFATDAKLSP-KGGFVSFIRGR-NLWVIDLASGRQM 185 (741)
T ss_dssp EECTTSSEEEEEET---TEEEEEESSSCSTTSCC-BCC---CSSSCEEEEEECT-TSSEEEEEETT-EEEEEETTTTEEE
T ss_pred EECCCCCEEEEEeC---CcEEEEECCCCCcceEE-Ecc---cCCcccccccCCC-CCCEEEEEeCC-cEEEEecCCCCEE
Confidence 99977544444443 57889999999 432 222 222 2378888 89999988754 8999999999988
Q ss_pred EecccccC----------------CCceEEEeecCeEEEEEEc
Q 016020 307 EVSRTEFM----------------TPSAFIFLYENQLFLTFRN 333 (396)
Q Consensus 307 ~v~~t~~~----------------~PsAFiFly~~qLFLTfs~ 333 (396)
.+...+.. .+.++.|+++++.+++.+.
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 87554432 2588999999986665543
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.39 E-value=5.2e-06 Score=76.21 Aligned_cols=184 Identities=13% Similarity=0.203 Sum_probs=122.2
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce-EEEEecc-----------CceEEEEEcC-CeEEEEEec-CCC
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISD-----------KHVQEIKISP-GIMLLIFNR-SSS 248 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs-~lysIs~-----------~~VqEIkiSp-g~~Ll~~q~-~~~ 248 (396)
..+..|-.+-||+ +|++...+..++.+++||..+-. .+..+.. .....|.++| +-.|++... .
T Consensus 88 ~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-- 164 (329)
T 3fvz_A 88 NLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-- 164 (329)
T ss_dssp TTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS--
T ss_pred CccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC--
Confidence 4567899999997 89999999999999999986543 6677632 3688999997 555556653 3
Q ss_pred eeeeEEEEeecCcEEEEEEee----------cccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEec--ccccCCC
Q 016020 249 HVPLKILSIEDGTVLKVFYHL----------LHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS--RTEFMTP 316 (396)
Q Consensus 249 ~iplkIl~IetG~~l~s~~~~----------L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~--~t~~~~P 316 (396)
.--+.+|+ .+|+.+..+... +..-..|.|-+..+..++....+..|++||..+++++... ......|
T Consensus 165 ~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 165 NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 23567888 788888776421 1111236666533555555567889999999988888754 3344556
Q ss_pred ceEEEee------cCeEEEEEEc-CeEEEEecc-cceeeeec---cccccCCC----CCCCcEEEccCCc
Q 016020 317 SAFIFLY------ENQLFLTFRN-RTVAVWNFR-GELVTSFE---DHLLWHPD----CNTNNIYITSDQD 371 (396)
Q Consensus 317 sAFiFly------~~qLFLTfs~-gti~iWd~~-geL~t~fe---dh~l~~~~----c~~n~~~it~~qd 371 (396)
.+..|.+ +++++++=+. ++|.+||.. |+++..+. .+..+ |. .+++++|||...+
T Consensus 244 ~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~-p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDM-PHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSS-EEEEEECTTSEEEEEESSS
T ss_pred ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCC-eeEEEECCCCCEEEEECCC
Confidence 6666666 4444444333 489999955 58888874 33322 22 4566777765443
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.36 E-value=2e-05 Score=70.09 Aligned_cols=181 Identities=8% Similarity=-0.006 Sum_probs=120.6
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc------CceEEEEEcCCeEEEEEecCCCe----------
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD------KHVQEIKISPGIMLLIFNRSSSH---------- 249 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~------~~VqEIkiSpg~~Ll~~q~~~~~---------- 249 (396)
..|--+.||+ +|++++....++.+.+||.++.+...-... ..+.++.++|+=.+++..+....
T Consensus 69 ~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 69 HHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp SSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 4577889998 889988888888999999988875443321 24567889865555564321000
Q ss_pred ---eeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcc-cceE---EEecccccCCCceEEEe
Q 016020 250 ---VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVR-NAEL---MEVSRTEFMTPSAFIFL 322 (396)
Q Consensus 250 ---iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~-~~ki---~~v~~t~~~~PsAFiFl 322 (396)
-.-.||.+.....+..+.-.+....-+.|.+ .+..|+....+..|.+||+. ++++ .++.......|....|.
T Consensus 148 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d 226 (296)
T 3e5z_A 148 MELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVD 226 (296)
T ss_dssp CCSSSCEEEEECTTSCEEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEB
T ss_pred ccCCCcEEEEECCCCCEEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEEC
Confidence 0125666655322332221122223477766 77777777788999999997 6666 33334466778999999
Q ss_pred ecCeEEEEEEcCeEEEEecccceeeeeccccccCCC----CCC-CcEEEccCC
Q 016020 323 YENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPD----CNT-NNIYITSDQ 370 (396)
Q Consensus 323 y~~qLFLTfs~gti~iWd~~geL~t~fedh~l~~~~----c~~-n~~~it~~q 370 (396)
++++|+++- ++.|.+||.+|+++..+..+.. ..+ -++ +.+|||+..
T Consensus 227 ~~G~l~v~~-~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 227 AGGLIWASA-GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp TTSCEEEEE-TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred CCCCEEEEc-CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC
Confidence 999999998 9999999999998887776554 222 123 257887654
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.30 E-value=0.00078 Score=63.43 Aligned_cols=228 Identities=11% Similarity=0.096 Sum_probs=130.0
Q ss_pred cccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCce---eeeEeeehhhhhhCCCCCCCcceeec
Q 016020 107 SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSS---LKCRSTKIEYIRRGKPDSGFALFESE 183 (396)
Q Consensus 107 sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~---L~cr~~~~~~i~~gk~~~~~~LF~~~ 183 (396)
.|....||..|++.+-.+-... .- .+-++...+.+.+++.+.+....+ =....+. +..++ ++-+-.
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~--~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d---~~t~~-----~~~~i~ 98 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAF--NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWD---ADKLT-----FEKEIS 98 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCE--EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEE---TTTCC-----EEEEEE
T ss_pred cCeEEEEECCCCeEEEEecCCC--CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEE---CcCCc-----EEEEEE
Confidence 4567788888888877765542 22 577787777777765443221000 0111221 11111 111110
Q ss_pred -------ccCCCCeEEeeCCCCcE-EEeecC-CCeEEEEeccCceEEEE-eccCceEEEEEcC------------CeEEE
Q 016020 184 -------SLKWPGFVEFDDVNGKV-LTYSAQ-DSIYKVFDLKNYTMLYS-ISDKHVQEIKISP------------GIMLL 241 (396)
Q Consensus 184 -------~l~~PgfVEFDd~NgkI-lt~~a~-d~~YrVwdlknYs~lys-Is~~~VqEIkiSp------------g~~Ll 241 (396)
.-.+|..+-|++ .||. .+++.. ++.+.|||+.+.+.+-. |.-...+.+.+.| |.++.
T Consensus 99 ~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~ 177 (361)
T 2oiz_A 99 LPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLT 177 (361)
T ss_dssp ECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEE
T ss_pred cCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEE
Confidence 125899999998 5654 445543 78999999999999888 6643333333333 22222
Q ss_pred EEecC-CCee----------------------------------eeEEEEeecCcEEE--EEEeec--------ccCC--
Q 016020 242 IFNRS-SSHV----------------------------------PLKILSIEDGTVLK--VFYHLL--------HRNK-- 274 (396)
Q Consensus 242 ~~q~~-~~~i----------------------------------plkIl~IetG~~l~--s~~~~L--------~~sk-- 274 (396)
+.... .... .+.++|+.+++... .+...- .+..
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSS
T ss_pred EEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCee
Confidence 22211 0000 13333333332111 111000 0011
Q ss_pred ccchhhhhcceeeEeec-----------CCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEcCeEEEEeccc
Q 016020 275 KVDFIEQFNEKLLVKQE-----------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG 343 (396)
Q Consensus 275 ~i~FiE~~~ekLLIKQe-----------d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g 343 (396)
.+.|.+ .+..|++-.+ +..+.+||+.+++.+...+.+. |.++.|.+++++.++...++|.+||.+.
T Consensus 258 ~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t 334 (361)
T 2oiz_A 258 LVGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQ 334 (361)
T ss_dssp CEEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSS
T ss_pred EEEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCC
Confidence 145544 6678887543 3479999999999999877776 9999999998855555459999999764
Q ss_pred ---ceeeee
Q 016020 344 ---ELVTSF 349 (396)
Q Consensus 344 ---eL~t~f 349 (396)
+++.++
T Consensus 335 ~~l~~~~~i 343 (361)
T 2oiz_A 335 PEPKLLRTI 343 (361)
T ss_dssp SSCEEEEEE
T ss_pred CcceeeEEe
Confidence 566665
No 168
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.28 E-value=7.5e-05 Score=68.98 Aligned_cols=156 Identities=8% Similarity=0.080 Sum_probs=117.0
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEE
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~ 266 (396)
|--+.+|+ +++......++.+.|||.++.+.+.+|+. .....|.++++-.|.+.... .-.+.++|.++|+.+..+
T Consensus 46 ~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~--~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 46 AQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIW--DYRIFIINPKTYEITGYI 121 (328)
T ss_dssp EEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBS--CSEEEEEETTTTEEEEEE
T ss_pred ceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECC--CCeEEEEECCCCeEEEEE
Confidence 44566765 78877777889999999999999999974 88999999544367777643 346788999999988876
Q ss_pred EeecccC----CccchhhhhcceeeEee--cCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-------
Q 016020 267 YHLLHRN----KKVDFIEQFNEKLLVKQ--ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN------- 333 (396)
Q Consensus 267 ~~~L~~s----k~i~FiE~~~ekLLIKQ--ed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~------- 333 (396)
.. +.. ..+.-+...+.+|++-. .+..|.+||..+++++...+. ...|....|.+++++|++-..
T Consensus 122 ~~--g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 122 EC--PDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp EC--TTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred Ec--CCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCcc
Confidence 62 321 12222223688898886 378999999999998775444 457889999999999888764
Q ss_pred ----CeEEEEeccc-ceeeeec
Q 016020 334 ----RTVAVWNFRG-ELVTSFE 350 (396)
Q Consensus 334 ----gti~iWd~~g-eL~t~fe 350 (396)
+.|.+||.+. +++..+.
T Consensus 199 ~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp CBCCCEEEEEETTTTEEEEEEE
T ss_pred ccCCceEEEEECCCCeEEEEEe
Confidence 5899999975 6665554
No 169
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.26 E-value=2.1e-05 Score=83.66 Aligned_cols=156 Identities=10% Similarity=0.108 Sum_probs=115.9
Q ss_pred CCCeEEee-CCCCcEEEeecCCCeEEEEeccCceEEEEecc--C-ceEEEEEcCCeEEEEEecCCCeeeeE-EEEeecCc
Q 016020 187 WPGFVEFD-DVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--K-HVQEIKISPGIMLLIFNRSSSHVPLK-ILSIEDGT 261 (396)
Q Consensus 187 ~PgfVEFD-d~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~-~VqEIkiSpg~~Ll~~q~~~~~iplk-Il~IetG~ 261 (396)
++..+.|+ + +|+.+++.+ ++.+.+|++.+.+.. .+.. . .+..+.||+|-.|+.... ..-+. +|++.+|+
T Consensus 297 ~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~sdg~~l~~~s~---~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 297 SKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGDTKVAFIHGTR---EGDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSSSEEEEEEEET---TEEEEEEEETTTCC
T ss_pred ccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEcCCCeEEEEEC---CCceEEEEECCCCC
Confidence 35678888 6 788888776 889999999887643 3433 3 788999995555544333 34566 77888776
Q ss_pred EEEEEEeecccCC---ccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-----
Q 016020 262 VLKVFYHLLHRNK---KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN----- 333 (396)
Q Consensus 262 ~l~s~~~~L~~sk---~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~----- 333 (396)
... +. ++.. .+.|.+ .+.+|++...+..|.+||+.++++..+...+.....++.|+++++.+++.+.
T Consensus 371 ~~~-l~---~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~ 445 (1045)
T 1k32_A 371 AEK-FE---ENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGE 445 (1045)
T ss_dssp EEE-CC---CCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSST
T ss_pred ceE-ec---CCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccc
Confidence 532 11 3322 377887 8999999999999999999999999988788888899999999997766654
Q ss_pred ------CeEEEEecccceeeeecccc
Q 016020 334 ------RTVAVWNFRGELVTSFEDHL 353 (396)
Q Consensus 334 ------gti~iWd~~geL~t~fedh~ 353 (396)
++|.+||.++..+..+.+|.
T Consensus 446 ~~~~~~~~i~l~d~~~g~~~~l~~~~ 471 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRKIFAATTEN 471 (1045)
T ss_dssp TCSCCEEEEEEEETTTTEEEECSCSS
T ss_pred ccCCCCCeEEEEECCCCcEEEeeCCC
Confidence 38999999974355555553
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.24 E-value=4.1e-05 Score=70.86 Aligned_cols=155 Identities=11% Similarity=0.067 Sum_probs=102.9
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEecc-CceEEEEecc---CceEEEEEcCCeE-EEEEecC-------C-----
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSISD---KHVQEIKISPGIM-LLIFNRS-------S----- 247 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlk-nYs~lysIs~---~~VqEIkiSpg~~-Ll~~q~~-------~----- 247 (396)
...|.++.|++ +|+.|.....+ .+.+||+. +.+....... .....+.+||+-- |+++... .
T Consensus 39 ~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 45799999998 67766544445 99999998 8876543321 2355688887443 2332211 0
Q ss_pred CeeeeEEEEee-cCcEEEEEEeec----ccCCccchhhhhcceeeEee-cCCeeeEEEcc-cceEEEecc----cccCCC
Q 016020 248 SHVPLKILSIE-DGTVLKVFYHLL----HRNKKVDFIEQFNEKLLVKQ-ENENLQILDVR-NAELMEVSR----TEFMTP 316 (396)
Q Consensus 248 ~~iplkIl~Ie-tG~~l~s~~~~L----~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~-~~ki~~v~~----t~~~~P 316 (396)
..-.+.+|++. +|+....+...- .+-..+.|.+ .|.+|++-. .+..|.+||+. ++++..+.. ++...|
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 23457999998 687665444211 1122377887 788888865 46799999999 888754322 235679
Q ss_pred ceEEEeecCeEEEEEE--cCeEEEEecc
Q 016020 317 SAFIFLYENQLFLTFR--NRTVAVWNFR 342 (396)
Q Consensus 317 sAFiFly~~qLFLTfs--~gti~iWd~~ 342 (396)
+.+.|.++++..++.. +++|.+|+.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 9999999997544444 3899999875
No 171
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.21 E-value=6.3e-05 Score=72.90 Aligned_cols=164 Identities=15% Similarity=0.179 Sum_probs=112.4
Q ss_pred eeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeE-EEEEecCCCeeeeEEEEe
Q 016020 180 FESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIM-LLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 180 F~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~-Ll~~q~~~~~iplkIl~I 257 (396)
+....+.+|-++-||+ +|++...+..++.+++||+.+.....-+.. .... +.++|.-- |++.....++ -+..++.
T Consensus 125 ~~~a~~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~-~I~~~d~ 201 (409)
T 3hrp_A 125 LASAKFKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTH-TVYVYMK 201 (409)
T ss_dssp TTTCCCCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTC-EEEEEEG
T ss_pred HHHcccCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCc-eEEEEEc
Confidence 4445788999999996 889999999899999999998776555544 3344 88886543 3343333222 6677777
Q ss_pred ecCcEEEEEEeecc----cCCccchhhhhcceeeEeecCCeeeEEEcccceEEEe----cccc-cCCCc-eEEEee-cCe
Q 016020 258 EDGTVLKVFYHLLH----RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV----SRTE-FMTPS-AFIFLY-ENQ 326 (396)
Q Consensus 258 etG~~l~s~~~~L~----~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v----~~t~-~~~Ps-AFiFly-~~q 326 (396)
.++.....+....+ +-..+.|-+ .+..|++-..++.|..||..++++..+ .... ...|. ...|.+ ++.
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 77766544421112 122355554 367788877778899999998876554 2222 22356 888998 699
Q ss_pred EEEEEEc-CeEEEEecccceee
Q 016020 327 LFLTFRN-RTVAVWNFRGELVT 347 (396)
Q Consensus 327 LFLTfs~-gti~iWd~~geL~t 347 (396)
||++-+. +.|..||.+|++.+
T Consensus 281 lyv~d~~~~~I~~~~~~g~~~~ 302 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGECEW 302 (409)
T ss_dssp EEEEETTTTEEEEECTTCCEEE
T ss_pred EEEEeCCCCEEEEEecCCCEEE
Confidence 9998776 89999999997433
No 172
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.17 E-value=1e-05 Score=86.03 Aligned_cols=165 Identities=9% Similarity=0.029 Sum_probs=119.2
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccC-------------ceEEEEEc-CCeEEEEEecCCCeeeeEEEE
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-------------HVQEIKIS-PGIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~-------------~VqEIkiS-pg~~Ll~~q~~~~~iplkIl~ 256 (396)
+.|++ +|+.+++. .++.+.+||+.. ..+..+... .+..+.+| |+--.+++.. ...+.+|+
T Consensus 250 ~~~Sp-DG~~la~~-~~~~i~~~d~~~-~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~---~~~i~~~~ 323 (1045)
T 1k32_A 250 RHLNT-DGRRILFS-KGGSIYIFNPDT-EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS---RGQAFIQD 323 (1045)
T ss_dssp EEEEE-SSSCEEEE-ETTEEEEECTTT-CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE---TTEEEEEC
T ss_pred eeEcC-CCCEEEEE-eCCEEEEecCCc-eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE---cCEEEEEc
Confidence 47776 78878776 589999999954 445577763 58999999 7643333333 24678899
Q ss_pred eecCcEEEEEEeecccCC----ccchhhhhcceeeEeecCCeee-EEEcccceEEEecccccCCCceEEEeecCeEEEEE
Q 016020 257 IEDGTVLKVFYHLLHRNK----KVDFIEQFNEKLLVKQENENLQ-ILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTF 331 (396)
Q Consensus 257 IetG~~l~s~~~~L~~sk----~i~FiE~~~ekLLIKQed~~L~-I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTf 331 (396)
+.+|+... + ..+.. .+.|. .++.|+...++..|. +||+.+++...+. .+...+.+..|+++++.+++.
T Consensus 324 ~~~~~~~~-~---~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~ 396 (1045)
T 1k32_A 324 VSGTYVLK-V---PEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVA 396 (1045)
T ss_dssp TTSSBEEE-C---SCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEE
T ss_pred CCCCceEE-c---cCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEE
Confidence 98887543 1 12222 37888 889999998888888 9999999888776 777788999999999988777
Q ss_pred Ec-CeEEEEeccc-ceeeeeccccccC---CCCCCCcEEEcc
Q 016020 332 RN-RTVAVWNFRG-ELVTSFEDHLLWH---PDCNTNNIYITS 368 (396)
Q Consensus 332 s~-gti~iWd~~g-eL~t~fedh~l~~---~~c~~n~~~it~ 368 (396)
++ ++|.+||+++ ++...++.|.-+. ...||++..++.
T Consensus 397 ~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 397 NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred CCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 77 7999999976 6666665554332 126677755444
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.08 E-value=3.6e-05 Score=76.00 Aligned_cols=161 Identities=11% Similarity=0.072 Sum_probs=106.9
Q ss_pred CCCeEEeeCCCCcEEEeecCC----------CeEEEEeccC------ceEEEEec-c--CceEEEEEcCCe-EEEEEecC
Q 016020 187 WPGFVEFDDVNGKVLTYSAQD----------SIYKVFDLKN------YTMLYSIS-D--KHVQEIKISPGI-MLLIFNRS 246 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d----------~~YrVwdlkn------Ys~lysIs-~--~~VqEIkiSpg~-~Ll~~q~~ 246 (396)
++..+.|++ +|+.|++.+.+ ..+.+||+.+ .+ +-.+. . ..+..+.+||+- .|++....
T Consensus 131 ~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 131 RWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp EEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEEC
T ss_pred cccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEECC
Confidence 345678888 88888887776 5899999988 54 33454 3 678889999754 44444433
Q ss_pred C-----CeeeeEEEEee-cCc--EEEEEEeecccCC---ccchhhhhcceeeEeecCC--eeeEEEcccceEEEeccccc
Q 016020 247 S-----SHVPLKILSIE-DGT--VLKVFYHLLHRNK---KVDFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSRTEF 313 (396)
Q Consensus 247 ~-----~~iplkIl~Ie-tG~--~l~s~~~~L~~sk---~i~FiE~~~ekLLIKQed~--~L~I~Dv~~~ki~~v~~t~~ 313 (396)
+ ...-+.+|++. +|+ ....+. -++.. .+.|.+ .|+.+++...++ .|..||+.++++..+...+.
T Consensus 209 ~~~~~~~~~~i~~~d~~~~g~~~~~~~l~--~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 285 (662)
T 3azo_A 209 HPRMPWEGTELKTARVTEDGRFADTRTLL--GGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLCRREE 285 (662)
T ss_dssp TTCCTTTCEEEEEEEECTTSCEEEEEEEE--EETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSS
T ss_pred CCCCCCCCcEEEEEEECCCCcccccEEeC--CCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeecccccc
Confidence 3 23569999999 683 222222 12122 367777 777566666666 67777777888887655443
Q ss_pred CC--------CceEEEeecCeEEEEEEcCeEEEE--ecccceeeeeccc
Q 016020 314 MT--------PSAFIFLYENQLFLTFRNRTVAVW--NFRGELVTSFEDH 352 (396)
Q Consensus 314 ~~--------PsAFiFly~~qLFLTfs~gti~iW--d~~geL~t~fedh 352 (396)
.. ...+.|+++++++++.+.+++.+| |..+..++.+..|
T Consensus 286 ~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 334 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGP 334 (662)
T ss_dssp BSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSS
T ss_pred cccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCC
Confidence 32 467889999999888777999999 6665334445444
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.08 E-value=0.00069 Score=60.59 Aligned_cols=191 Identities=13% Similarity=0.138 Sum_probs=111.0
Q ss_pred EEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecC-----
Q 016020 132 IRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQ----- 206 (396)
Q Consensus 132 IrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~----- 206 (396)
+.++-++.....|.+++....+. .-+....+.+ .|+ ...++.... ...+.|.+ +|+.|++.+.
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~--~~~l~~~~~~---~g~---~~~l~~~~~---~~~~~wsp-dg~~l~~~~~~~~~~ 128 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKK--VSEIWVADLE---TLS---SKKILEAKN---IRSLEWNE-DSRKLLIVGFKRRED 128 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTT--EEEEEEEETT---TTE---EEEEEEESE---EEEEEECT-TSSEEEEEEECCCC-
T ss_pred CCCeEECCCCCEEEEEEeccCCC--cceEEEEECC---CCc---eEEEEcCCC---ccceeECC-CCCEEEEEEccCCCc
Confidence 45566777777777765432111 1122222221 111 123443322 45667876 6777777653
Q ss_pred ----------------------CCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEecCCCe----e-eeEEEEeec
Q 016020 207 ----------------------DSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSH----V-PLKILSIED 259 (396)
Q Consensus 207 ----------------------d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~----i-plkIl~Iet 259 (396)
...+.+||+.+.+.+..+....+..+.+||+- +++....... . ...||.+.+
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~ 207 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED 207 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCC
Confidence 25788999999876444443388999999877 4444432211 2 345666656
Q ss_pred CcEEEEEEeecccCCccchhhhhcceeeEeecC--------CeeeEEEcccceEEEecccccCCCce-EEEeecCeEEEE
Q 016020 260 GTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN--------ENLQILDVRNAELMEVSRTEFMTPSA-FIFLYENQLFLT 330 (396)
Q Consensus 260 G~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed--------~~L~I~Dv~~~ki~~v~~t~~~~PsA-FiFly~~qLFLT 330 (396)
|+...-... .....+ -..|.+|++-..+ ..|.+|| +++...+...+...... ..|. ++ ++++
T Consensus 208 ~~~~~l~~~----~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~ 278 (347)
T 2gop_A 208 GKEEKMFEK----VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFT 278 (347)
T ss_dssp TEEEEEEEE----ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEE
T ss_pred CceEEeccC----cceeeE-CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEE
Confidence 554322221 111223 3478888776633 4688888 88888777666666665 6777 77 7666
Q ss_pred EEc-CeEEEEecc-cce
Q 016020 331 FRN-RTVAVWNFR-GEL 345 (396)
Q Consensus 331 fs~-gti~iWd~~-geL 345 (396)
.+. +.+.+| ++ |++
T Consensus 279 ~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 279 LFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp EEETTEEEEE-EESSSE
T ss_pred EecCCcEEEE-EcCCce
Confidence 555 899999 86 444
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.07 E-value=0.00031 Score=64.37 Aligned_cols=174 Identities=14% Similarity=0.135 Sum_probs=122.4
Q ss_pred CCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc---CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD---KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~---~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
+|--+.+++ +|++++ +.++.+..||. +.+.+.++.. .++..+.++++-.+++..... ..-+..++. +|+.+
T Consensus 38 ~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~-~~~v~~vd~-~Gk~l 111 (276)
T 3no2_A 38 ECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH-PSTILEVNM-KGEVL 111 (276)
T ss_dssp CCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST-TEEEEEECT-TSCEE
T ss_pred CCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCC-CCEEEEEeC-CCCEE
Confidence 567778887 899998 45778999999 8898888875 367777777554444444331 123444554 89999
Q ss_pred EEEEeecc------cCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeE
Q 016020 264 KVFYHLLH------RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTV 336 (396)
Q Consensus 264 ~s~~~~L~------~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti 336 (396)
..+...-. +...+.+.+ .+++|+....++.+.+||.. ++.+-.-... ..|.+..++++++++++-.+ +.|
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v 188 (276)
T 3no2_A 112 SKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCF 188 (276)
T ss_dssp EEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEE
T ss_pred EEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeE
Confidence 98874211 011134444 78888888899999999988 8877654443 57888888999998887776 589
Q ss_pred EEEecc-cceeeeecccc-----ccCCC----CCCCcEEEccC
Q 016020 337 AVWNFR-GELVTSFEDHL-----LWHPD----CNTNNIYITSD 369 (396)
Q Consensus 337 ~iWd~~-geL~t~fedh~-----l~~~~----c~~n~~~it~~ 369 (396)
..+|.+ |+++-.+..+- ++.+. -+++++||++-
T Consensus 189 ~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 189 VQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999999 99877775432 22233 47888888874
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.06 E-value=0.00014 Score=62.71 Aligned_cols=181 Identities=12% Similarity=0.124 Sum_probs=114.9
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEE-EEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCc
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~l-ysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
.+..|.-+.||+ +|++...+. ++.+.+||..+.... +...+ .....|.++++-.|++.....+ .+.+++..++.
T Consensus 65 ~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~--~i~~~~~~~~~ 140 (270)
T 1rwi_B 65 GLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNN--RVVKLAAGSKT 140 (270)
T ss_dssp SCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGT--EEEEECTTCCS
T ss_pred CcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCC--EEEEEECCCce
Confidence 346788899998 688877777 888999998876532 22223 6788999985444555543322 34445433333
Q ss_pred EEEEEEeecccCCccchhhhhcceeeEee-cCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEEE
Q 016020 262 VLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAVW 339 (396)
Q Consensus 262 ~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~iW 339 (396)
.......-+..-..+.+-+ .+ .|++-. .+..|.+||..+++......+....|.+..+.+++.||++-.. +.|.+|
T Consensus 141 ~~~~~~~~~~~p~~i~~~~-~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDN-SG-NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp CEECCCCSCCSCCCEEECT-TC-CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred eEeeccccCCCceeEEEeC-CC-CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence 2211110011122355554 44 466665 5679999999998887766666688999999999999998764 799999
Q ss_pred ecccceeeeec-cccccCCC----CCCCcEEEccCCc
Q 016020 340 NFRGELVTSFE-DHLLWHPD----CNTNNIYITSDQD 371 (396)
Q Consensus 340 d~~geL~t~fe-dh~l~~~~----c~~n~~~it~~qd 371 (396)
|.+|...+.+. .+. ..|. .+++++|++...+
T Consensus 219 ~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 219 LAGSTTSTVLPFTGL-NTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CTTCSCCEECCCCSC-SCEEEEEECTTCCEEEEEGGG
T ss_pred cCCCCcceeeccCCC-CCceeEEECCCCCEEEEECCC
Confidence 99996443322 221 2222 4567788776544
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.95 E-value=6.9e-05 Score=76.68 Aligned_cols=147 Identities=9% Similarity=0.155 Sum_probs=100.5
Q ss_pred EEeeCCCCcEEEeecCC---------CeEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeec
Q 016020 191 VEFDDVNGKVLTYSAQD---------SIYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIED 259 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d---------~~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~Iet 259 (396)
+.|.+ +|+.|++...+ +.|.+||+++.+.. .+.. ..++..+|||+--.+++... --|.++++.+
T Consensus 67 ~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~---~~i~~~~~~~ 141 (740)
T 4a5s_A 67 YSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWN---NDIYVKIEPN 141 (740)
T ss_dssp EEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEET---TEEEEESSTT
T ss_pred eEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEEC---CeEEEEECCC
Confidence 67888 89988888775 67789999998854 4543 67999999985444444443 2477899999
Q ss_pred CcEEEEEEe-----e-------------cccCCccchhhhhcceeeEeecCC----------------------------
Q 016020 260 GTVLKVFYH-----L-------------LHRNKKVDFIEQFNEKLLVKQENE---------------------------- 293 (396)
Q Consensus 260 G~~l~s~~~-----~-------------L~~sk~i~FiE~~~ekLLIKQed~---------------------------- 293 (396)
|+...-... . +....-+.|.+ +|++|+.-+.|+
T Consensus 142 ~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~ 220 (740)
T 4a5s_A 142 LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPK 220 (740)
T ss_dssp SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCB
T ss_pred CceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCC
Confidence 885531110 0 11122356777 888888765322
Q ss_pred --------eeeEEEccc---c---eEEEecc-----cccCCCceEEEeecCeEEEEEEcC-----eEEEEeccc
Q 016020 294 --------NLQILDVRN---A---ELMEVSR-----TEFMTPSAFIFLYENQLFLTFRNR-----TVAVWNFRG 343 (396)
Q Consensus 294 --------~L~I~Dv~~---~---ki~~v~~-----t~~~~PsAFiFly~~qLFLTfs~g-----ti~iWd~~g 343 (396)
.|.+||+.+ + +..++.. .+.......-|++++++.+...++ .|.+||+.+
T Consensus 221 ~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 221 AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp TTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred CcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 488899999 8 6666643 244445566789999977766552 699999886
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.94 E-value=0.00014 Score=74.36 Aligned_cols=154 Identities=11% Similarity=0.110 Sum_probs=101.0
Q ss_pred EeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCc-------eEEEE
Q 016020 161 RSTKIEYIRRGKPDSGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH-------VQEIK 233 (396)
Q Consensus 161 r~~~~~~i~~gk~~~~~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~-------VqEIk 233 (396)
+.++.+++..|..... .| -+.|.+ +|+.++.+ |+.+++||+++.+..--++... +.++.
T Consensus 3 ~~~tl~~~~~~~~~~~--~~---------~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (740)
T 4a5s_A 3 KTYTLTDYLKNTYRLK--LY---------SLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYS 68 (740)
T ss_dssp EECCHHHHHHTCSCCC--CC---------CEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEE
T ss_pred CceeHHHHhcCccccc--cc---------ccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceE
Confidence 4577889988865221 11 355666 67888875 9999999999998766566532 24588
Q ss_pred EcCCeEEEEEecCC-------CeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEE
Q 016020 234 ISPGIMLLIFNRSS-------SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELM 306 (396)
Q Consensus 234 iSpg~~Ll~~q~~~-------~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~ 306 (396)
+||+--.+++.... ..-.+.|||+++|+...-..+ -..-..+.|.+ .|++|..-. +.+|.+||+.+++.+
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~-~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERI-PNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCE
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccC-CCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceE
Confidence 89775544444331 124567999999985431110 01112378888 899998885 579999999999887
Q ss_pred Eecccc------------------cCCCceEEEeecCeEEEEE
Q 016020 307 EVSRTE------------------FMTPSAFIFLYENQLFLTF 331 (396)
Q Consensus 307 ~v~~t~------------------~~~PsAFiFly~~qLFLTf 331 (396)
.+.... +....++-|+||++..+..
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 753221 1223568899999864443
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.93 E-value=0.0049 Score=53.14 Aligned_cols=260 Identities=10% Similarity=0.078 Sum_probs=152.0
Q ss_pred ceEEEeec-cchhhhhhc-cccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhh
Q 016020 90 KVIEIVAA-RDIVFALAH-SGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEY 167 (396)
Q Consensus 90 ~V~EIv~a-~dii~~L~~-sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~ 167 (396)
.+..|... +.-+.+-.. .|.-..||.. ++..-+..+.....+++|....... +.+ +... + ..+. ..+.
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v-~~~~-~--~~i~--~~~~-- 85 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWF-TENA-A--NKIG--RITK-- 85 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEE-EETT-T--TEEE--EECT--
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEE-eCCC-C--CeEE--EECC--
Confidence 44455444 223333333 4666778777 7766665555567788898886443 333 2211 1 1111 1110
Q ss_pred hhhCCCCCCCccee-ecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce-EEEEec--cCceEEEEEcCCeEEEEE
Q 016020 168 IRRGKPDSGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSIS--DKHVQEIKISPGIMLLIF 243 (396)
Q Consensus 168 i~~gk~~~~~~LF~-~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs-~lysIs--~~~VqEIkiSpg~~Ll~~ 243 (396)
.|+. ..+. ......|.-+-+|+ +|++......++.+.+||. +.+ ..+... ...+..|.++++-.+.+.
T Consensus 86 --~g~~----~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 86 --KGII----KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFT 157 (299)
T ss_dssp --TSCE----EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred --CCcE----EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEE
Confidence 0111 1111 11345788889997 7888887777888899999 444 334443 266889999865445554
Q ss_pred ecCCCeeeeEEEEeecCcEEEEEEeeccc-CC---ccchhhhhcceeeEee-cCCeeeEEEcccceEEEe-cccccCCCc
Q 016020 244 NRSSSHVPLKILSIEDGTVLKVFYHLLHR-NK---KVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEV-SRTEFMTPS 317 (396)
Q Consensus 244 q~~~~~iplkIl~IetG~~l~s~~~~L~~-sk---~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v-~~t~~~~Ps 317 (396)
.... --+..++. +|+... +. ++. .. .+.+-+ .+ .|++.. .+..|.+||. +++.... .+.....|.
T Consensus 158 ~~~~--~~i~~~~~-~g~~~~-~~--~~~~~~~~~~i~~~~-~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 228 (299)
T 2z2n_A 158 ENQN--NAIGRITE-SGDITE-FK--IPTPASGPVGITKGN-DD-ALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPH 228 (299)
T ss_dssp ETTT--TEEEEECT-TCCEEE-EE--CSSTTCCEEEEEECT-TS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEE
T ss_pred eCCC--CEEEEEcC-CCcEEE-ee--CCCCCCcceeEEECC-CC-CEEEEccCCceEEEECC-CCcEEEEECCCCCCCce
Confidence 4332 34567777 776543 21 121 11 144433 34 466654 5778999999 8887665 344567899
Q ss_pred eEEEeecCeEEEEEE-cCeEEEEecccceee-eecccc--ccCCCCCCCcEEEccCCcEEEEe
Q 016020 318 AFIFLYENQLFLTFR-NRTVAVWNFRGELVT-SFEDHL--LWHPDCNTNNIYITSDQDLIISY 376 (396)
Q Consensus 318 AFiFly~~qLFLTfs-~gti~iWd~~geL~t-~fedh~--l~~~~c~~n~~~it~~qd~ii~~ 376 (396)
+..+.+++++|++-. ++.|..||.+|++.. .+..+. ++..--+++++|++...+=|+.+
T Consensus 229 ~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 229 AITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICFDGETIWFAMECDKIGKL 291 (299)
T ss_dssp EEEECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEECSSCEEEEETTTEEEEE
T ss_pred eEEECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEecCCCEEEEecCCcEEEE
Confidence 999999999999874 489999999886443 233321 11100167788887655555544
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.93 E-value=0.00022 Score=64.61 Aligned_cols=159 Identities=9% Similarity=0.083 Sum_probs=103.8
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEeccCceEEEE--EcC-CeEEEEEec-------------------C
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISDKHVQEIK--ISP-GIMLLIFNR-------------------S 246 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs~~~VqEIk--iSp-g~~Ll~~q~-------------------~ 246 (396)
+.|++ +|+.|++...+..+.+||+.+.+ .++......+.... ++| |..++.... .
T Consensus 86 ~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 86 GFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp CEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred eEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 35777 89999999999999999999987 46666655444333 354 444433221 2
Q ss_pred CCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecC------CeeeEEEcccceEEEeccccc-CCCceE
Q 016020 247 SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNAELMEVSRTEF-MTPSAF 319 (396)
Q Consensus 247 ~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed------~~L~I~Dv~~~ki~~v~~t~~-~~PsAF 319 (396)
....-|.++++.+|+...-+... ..-..+.|.+..+.+|+.-.++ ..|.++|+.+++...+..... ......
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHE 243 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEE
T ss_pred CCcceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccc
Confidence 23367889999999765544321 1123477877688888877654 377788888887776654332 234566
Q ss_pred EEeecCeE--EEEEEcC----eEEEEeccc-c--eeeeecc
Q 016020 320 IFLYENQL--FLTFRNR----TVAVWNFRG-E--LVTSFED 351 (396)
Q Consensus 320 iFly~~qL--FLTfs~g----ti~iWd~~g-e--L~t~fed 351 (396)
.|+++++. |++..++ .|.+||+.+ + .++.+..
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 284 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPA 284 (388)
T ss_dssp EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECC
T ss_pred eECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCC
Confidence 79999984 4444433 399999987 4 5556655
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.91 E-value=0.00026 Score=70.23 Aligned_cols=178 Identities=15% Similarity=0.167 Sum_probs=120.8
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCce-------------EEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEE
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------------MLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKI 254 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs-------------~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkI 254 (396)
---+.+...-|.+.+.++ ..++||++++-. .+..+.+ |..+.+ +|..|.+. . ..-+++
T Consensus 40 ~nlLais~~~gll~a~~~--~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~--V~~l~f-d~~~L~v~--~--~~~l~v 110 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASG--SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD--VIFVCF-HGDQVLVS--T--RNALYS 110 (388)
T ss_dssp CBCEEEETTTTEEEEEET--TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT--EEEEEE-ETTEEEEE--E--SSEEEE
T ss_pred ccEEEEcCCCCEEEEeCC--CEEEEEEhhHhhhhhccccccccceEEeeCCC--eeEEEE-CCCEEEEE--c--CCcEEE
Confidence 344667776666665444 478889987554 4566665 999999 88887777 2 247999
Q ss_pred EEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEcC
Q 016020 255 LSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNR 334 (396)
Q Consensus 255 l~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~g 334 (396)
||+.+-.........-.+...+.++. ..+++-..|+.|.+||+.+++.... ...++++-.++.+ +.+.+.||
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~---p~~av~~~dG~L~v~dl~~~~~~~~----~~~Vs~v~WSpkG-~~vg~~dg 182 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVN---NTLVILNSVNDLSALDLRTKSTKQL----AQNVTSFDVTNSQ-LAVLLKDR 182 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEE----EESEEEEEECSSE-EEEEETTS
T ss_pred EEchhhhccCccceeecceeeEEecC---CCEEEEECCCCEEEEEccCCccccc----cCCceEEEEcCCc-eEEEEcCC
Confidence 99987664433321101112233332 2388888999999999999887653 3467899999999 89999999
Q ss_pred eEEEEecccce---eeee------ccccccCCCCCCCcEEEccCCcEEEEeccCCCCCc
Q 016020 335 TVAVWNFRGEL---VTSF------EDHLLWHPDCNTNNIYITSDQDLIISYCKAEPEDQ 384 (396)
Q Consensus 335 ti~iWd~~geL---~t~f------edh~l~~~~c~~n~~~it~~qd~ii~~~~~~~~~~ 384 (396)
++.+|+.++.. +..+ ++| +-+...+....|+. +..++++|...+.++.
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~-~~~~~~V~sI~wl~-~~~flv~y~~~~~~~~ 239 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEEL-PVEEYSPLSVTILS-PQDFLAVFGNVISETD 239 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTS-CTTTSEEEEEEESS-SSEEEEEEECCCCSSC
T ss_pred cEEEEcCCCccccccceecCCcccccc-cCCCeeEEEEEEec-CCeEEEEEcCCCCCcC
Confidence 99999999954 6666 443 11333444455554 6777889988775444
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.90 E-value=0.00014 Score=65.12 Aligned_cols=127 Identities=17% Similarity=0.215 Sum_probs=87.3
Q ss_pred CCcEEEeec---------CCCeEEEEeccCceEEEEeccCceEEEEEcCCe-EEEEEecCC--CeeeeEEEEeecCcEEE
Q 016020 197 NGKVLTYSA---------QDSIYKVFDLKNYTMLYSISDKHVQEIKISPGI-MLLIFNRSS--SHVPLKILSIEDGTVLK 264 (396)
Q Consensus 197 NgkIlt~~a---------~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~-~Ll~~q~~~--~~iplkIl~IetG~~l~ 264 (396)
+|+.++|.. .++.+.+||+.+.+. ..+ ..+..++|||+- .|++..... ...-|.++++.+|+...
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l--~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~ 99 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-RFI--ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKK 99 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-EEE--ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCce-EEc--ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEE
Confidence 478888753 267788999998763 344 678899999754 444433332 35568888999888765
Q ss_pred EEEeecccCCccchhhhhcceeeEeec---------------------------CCeeeEEEcccceE-EEecccccCCC
Q 016020 265 VFYHLLHRNKKVDFIEQFNEKLLVKQE---------------------------NENLQILDVRNAEL-MEVSRTEFMTP 316 (396)
Q Consensus 265 s~~~~L~~sk~i~FiE~~~ekLLIKQe---------------------------d~~L~I~Dv~~~ki-~~v~~t~~~~P 316 (396)
.+... .-..+.|.+ .+++|++... ...|.+||+.+++. ..+.. . .+
T Consensus 100 l~~~~--~~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~ 173 (347)
T 2gop_A 100 ILEAK--NIRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RF 173 (347)
T ss_dssp EEEES--EEEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TT
T ss_pred EEcCC--CccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-Cc
Confidence 44421 123467776 7888888763 25799999999988 44433 2 77
Q ss_pred ceEEEeecCeEEEEEEc
Q 016020 317 SAFIFLYENQLFLTFRN 333 (396)
Q Consensus 317 sAFiFly~~qLFLTfs~ 333 (396)
..+.|.+++ +.++.+.
T Consensus 174 ~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 174 SSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp CEEEEETTE-EEEEEEC
T ss_pred ccccCCCCe-EEEEEec
Confidence 889999999 6666543
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.84 E-value=6.3e-05 Score=67.76 Aligned_cols=151 Identities=9% Similarity=0.063 Sum_probs=92.2
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEeccCceEE-------------------EEEcCCeEEEEEe---cC
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISDKHVQE-------------------IKISPGIMLLIFN---RS 246 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs~~~VqE-------------------IkiSpg~~Ll~~q---~~ 246 (396)
+.|.+ +|+.|++.+.++.+.+||+.+.+ .++.....-..+ +.+||+--.+++. ..
T Consensus 86 ~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 86 GFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp CEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred ceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 45666 78999999999899999999876 444433321111 1112111000000 01
Q ss_pred CCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecC------CeeeEEEcccceEEEecccc-cCCCceE
Q 016020 247 SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNAELMEVSRTE-FMTPSAF 319 (396)
Q Consensus 247 ~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed------~~L~I~Dv~~~ki~~v~~t~-~~~PsAF 319 (396)
....-+.++++.+|+....+... ..-..+.|.+..+.+|+.-.++ ..|.+||+.+++...+.... ...+...
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred CCcceEEEEECCCCcEEeeccCC-cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 23456888999999876544311 1122367777667778776654 35888899888777665532 3346667
Q ss_pred EEeecCeEEEEEE-c-----CeEEEEeccc
Q 016020 320 IFLYENQLFLTFR-N-----RTVAVWNFRG 343 (396)
Q Consensus 320 iFly~~qLFLTfs-~-----gti~iWd~~g 343 (396)
.|.++++.++..+ . ++|.+||+.+
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 8999988543333 2 3499999976
No 184
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.80 E-value=0.00036 Score=64.64 Aligned_cols=186 Identities=13% Similarity=0.108 Sum_probs=110.8
Q ss_pred cccCCCCeEEeeCCCCcEEEeecC-----CCeEEEEeccCceEEEEecc--------CceEEEEEcC-CeEEEEEecC-C
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISD--------KHVQEIKISP-GIMLLIFNRS-S 247 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~-----d~~YrVwdlknYs~lysIs~--------~~VqEIkiSp-g~~Ll~~q~~-~ 247 (396)
..+.+|-=|.||+ .|++...+.. +..+.+||+++.+.+..+.- ..+.+|++++ +-.+.+.... .
T Consensus 64 ~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 4578899999998 5888776654 67899999999886655542 2468999994 3354555441 1
Q ss_pred CeeeeEEEEeecCcEEEEEEe----------------ec-------------ccCCccchhhhhcceeeEeecCCeeeEE
Q 016020 248 SHVPLKILSIEDGTVLKVFYH----------------LL-------------HRNKKVDFIEQFNEKLLVKQENENLQIL 298 (396)
Q Consensus 248 ~~iplkIl~IetG~~l~s~~~----------------~L-------------~~sk~i~FiE~~~ekLLIKQed~~L~I~ 298 (396)
..--+.+|+..+|+....+.. .+ ....-|.|.+ .+..|++....+. ++|
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~-~l~ 220 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHST-SMY 220 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCS-EEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCC-eEE
Confidence 245678899998876443210 00 0001133333 3444554443322 333
Q ss_pred EcccceEEE-----------e-cccccCCCceEEEeecCeEEEEEEc-CeEEEEec-ccceeeeeccccccCCC----CC
Q 016020 299 DVRNAELME-----------V-SRTEFMTPSAFIFLYENQLFLTFRN-RTVAVWNF-RGELVTSFEDHLLWHPD----CN 360 (396)
Q Consensus 299 Dv~~~ki~~-----------v-~~t~~~~PsAFiFly~~qLFLTfs~-gti~iWd~-~geL~t~fedh~l~~~~----c~ 360 (396)
.+.+..+.. + ..++.-.|....+..++.||++-+. +.|..||. .|++.+-..+..+..|. -+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGS 300 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECT
T ss_pred EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECC
Confidence 332211000 0 0012236888999999999999987 89999999 88765544433222232 25
Q ss_pred CCcEEEccCCc
Q 016020 361 TNNIYITSDQD 371 (396)
Q Consensus 361 ~n~~~it~~qd 371 (396)
++++|||..|.
T Consensus 301 ~g~l~v~~~~~ 311 (343)
T 2qe8_A 301 DGYLYFDCNQL 311 (343)
T ss_dssp TSCEEEEECCG
T ss_pred CCcEEEEeCcc
Confidence 67788877653
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.78 E-value=0.00053 Score=59.10 Aligned_cols=175 Identities=10% Similarity=0.052 Sum_probs=110.3
Q ss_pred CCCeEEeeCCCCcEEE-eecCCCeEEEEeccCceEEE-Eecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 187 WPGFVEFDDVNGKVLT-YSAQDSIYKVFDLKNYTMLY-SISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt-~~a~d~~YrVwdlknYs~ly-sIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
.|.-+-+|+ +|++.. .+..++.+.+||..+..... .... ..+..|.++++-.|++... . --+.+|+..++...
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~--~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-N--NRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-T--TEEEEECTTCSCCE
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-C--CEEEEEeCCCceEe
Confidence 899999998 678777 77888999999987665322 2222 5788899986444555554 2 24566776554432
Q ss_pred EEEEeecccCC---ccchhhhhcceeeEe-ecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEEE
Q 016020 264 KVFYHLLHRNK---KVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVAV 338 (396)
Q Consensus 264 ~s~~~~L~~sk---~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~i 338 (396)
.+. ..... .+.|-+ .| +|++- ..+..|.+||..+.+...........|.+..+.+++++|++-.. +.|.+
T Consensus 101 -~~~--~~~~~~p~~i~~~~-~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 101 -VLP--FDGLNYPEGLAVDT-QG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 175 (270)
T ss_dssp -ECC--CCSCSSEEEEEECT-TC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE
T ss_pred -eee--cCCcCCCcceEECC-CC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEE
Confidence 221 11111 244444 34 46665 45678999988777666555566678999999999999998775 89999
Q ss_pred Eeccccee-eeeccccccCCC----CCCCcEEEccCCc
Q 016020 339 WNFRGELV-TSFEDHLLWHPD----CNTNNIYITSDQD 371 (396)
Q Consensus 339 Wd~~geL~-t~fedh~l~~~~----c~~n~~~it~~qd 371 (396)
||.++... .....+. ..|. -+++++|++...+
T Consensus 176 ~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 176 LEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp ECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT
T ss_pred EecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC
Confidence 99999533 2222221 2222 3566888887433
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.77 E-value=0.0027 Score=56.73 Aligned_cols=164 Identities=11% Similarity=0.090 Sum_probs=104.7
Q ss_pred CCCCeEEeeCCCCcEEEeecCC----CeEEEEeccCceEEEEec----cCceEEEEEcCCeEEEEEecCC----CeeeeE
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKNYTMLYSIS----DKHVQEIKISPGIMLLIFNRSS----SHVPLK 253 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d----~~YrVwdlknYs~lysIs----~~~VqEIkiSpg~~Ll~~q~~~----~~iplk 253 (396)
..|.-+.||+ +|++++....+ +.+.+||..+......+. ...+.+|.++|+-.+++..... ...-+-
T Consensus 87 ~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 87 ANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 4577888987 68887776666 678899998877543332 3568999999665555544321 123344
Q ss_pred EEEeecCcEEEEEEeecccCCccchhhhhcceeeEe-ecCCeeeEEEccc-ce-EEEe----c--ccccCCCceEEEeec
Q 016020 254 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRN-AE-LMEV----S--RTEFMTPSAFIFLYE 324 (396)
Q Consensus 254 Il~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~-~k-i~~v----~--~t~~~~PsAFiFly~ 324 (396)
.++..+|+...-.. .+.....+.|.+ .+..|++- ..+..|.+||+.+ ++ +... . -+....|....+.++
T Consensus 166 ~~~~~~~~~~~~~~-~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~ 243 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQ-NISVANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSD 243 (333)
T ss_dssp EECTTSCCEEEEEE-EESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTT
T ss_pred EEeCCCCEEEEeec-CCCcccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCC
Confidence 44444454433222 122223466666 67777765 4578999999964 33 2211 1 111246888888899
Q ss_pred CeEEEEEEc-CeEEEEecccceeeeeccc
Q 016020 325 NQLFLTFRN-RTVAVWNFRGELVTSFEDH 352 (396)
Q Consensus 325 ~qLFLTfs~-gti~iWd~~geL~t~fedh 352 (396)
++++++-.. +.|.+||.+|+.+..+..+
T Consensus 244 G~l~v~~~~~~~v~~~d~~g~~~~~~~~~ 272 (333)
T 2dg1_A 244 DNLYVAMYGQGRVLVFNKRGYPIGQILIP 272 (333)
T ss_dssp CCEEEEEETTTEEEEECTTSCEEEEEECT
T ss_pred CCEEEEEcCCCEEEEECCCCCEEEEEEcC
Confidence 999998765 8999999999877766533
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.73 E-value=0.0015 Score=58.41 Aligned_cols=158 Identities=8% Similarity=0.035 Sum_probs=101.8
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEe--ccCceEEEEEcCCeEEEEEecCC--CeeeeEEEEeecC
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI--SDKHVQEIKISPGIMLLIFNRSS--SHVPLKILSIEDG 260 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysI--s~~~VqEIkiSpg~~Ll~~q~~~--~~iplkIl~IetG 260 (396)
..+|.-+-||+ +|++...+..++.+.+||.++.+..... ....+..|.++|+-.|++..... ...-+.+|+.++|
T Consensus 44 ~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 44 GLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred CccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 34666778886 8888877788899999999987754333 34789999998654455554332 1135778888887
Q ss_pred cEEEEEEeecccCCc---cchhhhhcceeeEeec-------CCeeeEEEcccceEEEecccccCCCceEEEeecCe-EEE
Q 016020 261 TVLKVFYHLLHRNKK---VDFIEQFNEKLLVKQE-------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFL 329 (396)
Q Consensus 261 ~~l~s~~~~L~~sk~---i~FiE~~~ekLLIKQe-------d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFL 329 (396)
+....+.. ...... +.|-+ .+ .|++... ...|..||..++++..+. .....|....|.++++ ||+
T Consensus 123 ~~~~~~~~-~~~~~~~~~i~~d~-~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 123 NLQDIIED-LSTAYCIDDMVFDS-KG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWV 198 (333)
T ss_dssp SCEEEECS-SSSCCCEEEEEECT-TS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEE
T ss_pred EEEEEEcc-CccCCcccceEECC-CC-CEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEE
Confidence 75432210 111122 44444 34 5666543 255777777776766553 3345688889999986 777
Q ss_pred EEE-cCeEEEEec--ccceee
Q 016020 330 TFR-NRTVAVWNF--RGELVT 347 (396)
Q Consensus 330 Tfs-~gti~iWd~--~geL~t 347 (396)
+-+ ++.|.+||. +|..++
T Consensus 199 ~~~~~~~i~~~d~~~~g~~~~ 219 (333)
T 2dg1_A 199 TETTANRLHRIALEDDGVTIQ 219 (333)
T ss_dssp EEGGGTEEEEEEECTTSSSEE
T ss_pred EeCCCCeEEEEEecCCCcCcc
Confidence 765 489999999 454433
No 188
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.71 E-value=4.5e-05 Score=72.45 Aligned_cols=179 Identities=11% Similarity=0.158 Sum_probs=93.8
Q ss_pred cEEEeecCCCeEEEEeccCceEEEEeccCceEEEEEc-CCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecc---cCC
Q 016020 199 KVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH---RNK 274 (396)
Q Consensus 199 kIlt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiS-pg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~---~sk 274 (396)
..+.....|+.+..||+++.+.+.+.....+....+. +|.++ +.... .--+..||.+||+.+....+..+ .+.
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~-v~~s~--dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAF-LPDPN--DGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCE-EECTT--TCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEE-EEeCC--CCEEEEEECCCCceeeeeeccCccccccC
Confidence 3444456788999999999999988876444333333 34333 33322 34588999999998876542211 111
Q ss_pred ccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEe-ecCeEEEEEEcCeEEEEecc-cceeeeeccc
Q 016020 275 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFL-YENQLFLTFRNRTVAVWNFR-GELVTSFEDH 352 (396)
Q Consensus 275 ~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFl-y~~qLFLTfs~gti~iWd~~-geL~t~fedh 352 (396)
++ + ..++.|++...++.|.+||..+++++-....+. ...+. .++.+|+...++.+..||.+ |+++-+++-+
T Consensus 87 p~--~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 87 PC--R-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp SC--C------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred ce--E-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 11 1 146788999999999999999999876443332 11222 45666777777999999985 5765554422
Q ss_pred c--ccCCC---CCCCcEEEccCCcEEEEeccCCCCCcccc
Q 016020 353 L--LWHPD---CNTNNIYITSDQDLIISYCKAEPEDQWME 387 (396)
Q Consensus 353 ~--l~~~~---c~~n~~~it~~qd~ii~~~~~~~~~~~~~ 387 (396)
- ..+.. ..++.+|++.....+.++=...+.-.|..
T Consensus 160 ~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 160 DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 1 11111 12378998877777777776666666754
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.71 E-value=0.0018 Score=58.37 Aligned_cols=163 Identities=10% Similarity=0.127 Sum_probs=106.7
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEE--EEecc----CceEEEEEcCCeEEEEEecCCC-------eeee
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML--YSISD----KHVQEIKISPGIMLLIFNRSSS-------HVPL 252 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~l--ysIs~----~~VqEIkiSpg~~Ll~~q~~~~-------~ipl 252 (396)
..|+.+-||+ +|++++.. ++.+.+||.++.+.. ..... ..+.+++++|+=.+.+...... .-.-
T Consensus 54 ~~~~~i~~~~-dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 54 APVSSVALRQ-SGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SCEEEEEEBT-TSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CceEEEEECC-CCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 3578888987 77777654 567888999887643 33321 3578899996443444332111 1124
Q ss_pred EEEEeec-CcEEEEEEeecccCCccchhhhhcceeeE-eecCCeeeEEEc--ccceEEE-----ecccccCCCceEEEee
Q 016020 253 KILSIED-GTVLKVFYHLLHRNKKVDFIEQFNEKLLV-KQENENLQILDV--RNAELME-----VSRTEFMTPSAFIFLY 323 (396)
Q Consensus 253 kIl~Iet-G~~l~s~~~~L~~sk~i~FiE~~~ekLLI-KQed~~L~I~Dv--~~~ki~~-----v~~t~~~~PsAFiFly 323 (396)
.|+-+.. |+... +...+...+-+.|.+ .+..|++ ...+..|.+||+ .++++.. ........|....+-.
T Consensus 131 ~l~~~d~~g~~~~-~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~ 208 (297)
T 3g4e_A 131 ALYSLFPDHHVKK-YFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA 208 (297)
T ss_dssp EEEEECTTSCEEE-EEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT
T ss_pred EEEEEECCCCEEE-EeeccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC
Confidence 6777764 44333 222234445588887 7777765 456788999998 5665431 2223345788988989
Q ss_pred cCeEEEEEEc-CeEEEEecc-cceeeeecccc
Q 016020 324 ENQLFLTFRN-RTVAVWNFR-GELVTSFEDHL 353 (396)
Q Consensus 324 ~~qLFLTfs~-gti~iWd~~-geL~t~fedh~ 353 (396)
+++|+++-.. +.|..||.+ |+++..++-+.
T Consensus 209 ~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 209 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp TSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 9999999876 789999998 89888776553
No 190
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.70 E-value=0.0076 Score=55.41 Aligned_cols=248 Identities=10% Similarity=0.121 Sum_probs=142.9
Q ss_pred EeeccchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCC
Q 016020 94 IVAARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKP 173 (396)
Q Consensus 94 Iv~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~ 173 (396)
++...+.|++-+..|.-.|||..||+.+=...... ++..+.... ++.+++.+ .+ ..|.|-.. .
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~~~--~~~v~v~~---~~--g~l~~~d~-----~---- 161 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPVVS--DGLVLIHT---SN--GQLQALNE-----A---- 161 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCEEE--TTEEEEEC---TT--SEEEEEET-----T----
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCEEE--CCEEEEEc---CC--CeEEEEEC-----C----
Confidence 34557888888888989999999999876554432 222222222 23444422 11 12333221 1
Q ss_pred CCCCcceeecc---------cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCc---------e----EE
Q 016020 174 DSGFALFESES---------LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH---------V----QE 231 (396)
Q Consensus 174 ~~~~~LF~~~~---------l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~---------V----qE 231 (396)
.|..+..... ...| -.+ +|.+++ ...++.+..+|.++.+.+.+..... + ..
T Consensus 162 -tG~~~W~~~~~~~~~~~~~~~~~---~~~--~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T 3q7m_A 162 -DGAVKWTVNLDMPSLSLRGESAP---TTA--FGAAVV-GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTT 234 (376)
T ss_dssp -TCCEEEEEECCC-----CCCCCC---EEE--TTEEEE-CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCC
T ss_pred -CCcEEEEEeCCCCceeecCCCCc---EEE--CCEEEE-EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCC
Confidence 1222222111 0122 222 355554 3457788889999998888776321 0 12
Q ss_pred EEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecc-
Q 016020 232 IKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR- 310 (396)
Q Consensus 232 IkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~- 310 (396)
..+.+|.+++.. . .--+..+|.++|+.+-.... .. ... ....++.|++...++.|..+|..+++.+-...
T Consensus 235 p~~~~~~v~~~~-~---~g~l~~~d~~tG~~~w~~~~--~~--~~~-~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 235 PVVVNGVVFALA-Y---NGNLTALDLRSGQIMWKREL--GS--VND-FIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp CEEETTEEEEEC-T---TSCEEEEETTTCCEEEEECC--CC--EEE-EEEETTEEEEEETTCCEEEEETTTCCEEEEECT
T ss_pred cEEECCEEEEEe-c---CcEEEEEECCCCcEEeeccC--CC--CCC-ceEECCEEEEEcCCCeEEEEECCCCcEEEeecc
Confidence 223455554332 1 23578889999998876541 11 111 23368899999999999999999998875433
Q ss_pred cccCCCceEEEeecCeEEEEEEcCeEEEEecc-cceeeeecc---ccccCCCCCCCcEEEccCCcEEEE
Q 016020 311 TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFED---HLLWHPDCNTNNIYITSDQDLIIS 375 (396)
Q Consensus 311 t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~-geL~t~fed---h~l~~~~c~~n~~~it~~qd~ii~ 375 (396)
.......+ ..+.++.||+.-.+|.+.++|.. |+++..++- .....|--.++.+|+.....-|..
T Consensus 306 ~~~~~~~~-~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~ 373 (376)
T 3q7m_A 306 LLHRLLTS-PVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYS 373 (376)
T ss_dssp TTTSCCCC-CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEE
T ss_pred cCCCcccC-CEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEE
Confidence 11112222 23468899998888999999964 576665442 223334455778887766544443
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.67 E-value=0.026 Score=57.28 Aligned_cols=202 Identities=9% Similarity=0.050 Sum_probs=119.7
Q ss_pred eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCC--CeEEeeCCCCcEEEeecCCC
Q 016020 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKWP--GFVEFDDVNGKVLTYSAQDS 208 (396)
Q Consensus 131 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~P--gfVEFDd~NgkIlt~~a~d~ 208 (396)
.+.++-...+...|.+++.....+-..+ +.. ++.-|+. + ....+.+- +-+.|.+ .|+.++|.+.|.
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i--~v~---dl~tg~~-----~-~~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~ 189 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVL--HVI---DVDSGEW-----S-KVDVIEGGKYATPKWTP-DSKGFYYEWLPT 189 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEE--EEE---ETTTCCB-----C-SSCCBSCCTTCCCEECT-TSSEEEEEECCC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEE--EEE---ECCCCCC-----c-CCcccCcccccceEEec-CCCEEEEEEecC
Confidence 5667777776666666554433221223 222 2333332 1 01122222 4577877 789999988877
Q ss_pred e-------------EEEEeccCce----EEEEecc--CceEEEEEcCC-eEEEEEecCC-CeeeeEEEEeecCcEEEEEE
Q 016020 209 I-------------YKVFDLKNYT----MLYSISD--KHVQEIKISPG-IMLLIFNRSS-SHVPLKILSIEDGTVLKVFY 267 (396)
Q Consensus 209 ~-------------YrVwdlknYs----~lysIs~--~~VqEIkiSpg-~~Ll~~q~~~-~~iplkIl~IetG~~l~s~~ 267 (396)
. +++|++.+.. ++|...+ ..+..+.+||+ -.|++....+ ...-+.+++..+|+.. .+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~ 268 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV 268 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee
Confidence 6 9999998765 7888766 46889999975 4444444333 3556666776666533 222
Q ss_pred eecccCCccchhhhhcceeeEeec----CCeeeEEEcccceE---EEecccc-cCCCceEEEeecCeEEEEEEc-CeEEE
Q 016020 268 HLLHRNKKVDFIEQFNEKLLVKQE----NENLQILDVRNAEL---MEVSRTE-FMTPSAFIFLYENQLFLTFRN-RTVAV 338 (396)
Q Consensus 268 ~~L~~sk~i~FiE~~~ekLLIKQe----d~~L~I~Dv~~~ki---~~v~~t~-~~~PsAFiFly~~qLFLTfs~-gti~i 338 (396)
- +...........+. |++..+ +..|.+||+.+++. ..+.... ......+-|. +++|+++.+. ++.++
T Consensus 269 ~--~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l 344 (695)
T 2bkl_A 269 K--GVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEV 344 (695)
T ss_dssp E--CSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEE
T ss_pred c--CCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEE
Confidence 1 22222222224677 888764 67899999988762 4443332 4445666666 7888877765 78888
Q ss_pred Eecc--cceeeee
Q 016020 339 WNFR--GELVTSF 349 (396)
Q Consensus 339 Wd~~--geL~t~f 349 (396)
|.++ |+....+
T Consensus 345 ~~~~~~g~~~~~l 357 (695)
T 2bkl_A 345 RVATLKGKPVRTV 357 (695)
T ss_dssp EEEETTCCEEEEC
T ss_pred EEEeCCCCeeEEe
Confidence 8654 6544433
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.62 E-value=0.00066 Score=68.96 Aligned_cols=150 Identities=10% Similarity=0.073 Sum_probs=95.6
Q ss_pred eEEeeCCCCcEEEeecCCC-----eEEEEeccCceEEE-EeccCceEEEEEcCCe-EEEEEecCCC-------------e
Q 016020 190 FVEFDDVNGKVLTYSAQDS-----IYKVFDLKNYTMLY-SISDKHVQEIKISPGI-MLLIFNRSSS-------------H 249 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d~-----~YrVwdlknYs~ly-sIs~~~VqEIkiSpg~-~Ll~~q~~~~-------------~ 249 (396)
.+.|.+ +|+.|+|...++ .++|||+.+.+.+- .+.+..+..+.|||+- .|+....... .
T Consensus 129 ~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 129 GYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCC
Confidence 567886 899999887754 89999999998654 3444457789999654 4443333222 1
Q ss_pred eeeEEEEeecCcEEEEEEeecc-cC---CccchhhhhcceeeEeec-----CCeeeEEEccc------c--eEEEecccc
Q 016020 250 VPLKILSIEDGTVLKVFYHLLH-RN---KKVDFIEQFNEKLLVKQE-----NENLQILDVRN------A--ELMEVSRTE 312 (396)
Q Consensus 250 iplkIl~IetG~~l~s~~~~L~-~s---k~i~FiE~~~ekLLIKQe-----d~~L~I~Dv~~------~--ki~~v~~t~ 312 (396)
.-+.+|++.+|+....+.+-.+ +. ..+.|.+ .|.+|++... +..|.+||+.+ + +...+....
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 2278889988873322221111 11 1367777 8999998875 67899999987 5 455543322
Q ss_pred cCCCceEEEeecCeEEEEEEc-----CeEEEEeccc
Q 016020 313 FMTPSAFIFLYENQLFLTFRN-----RTVAVWNFRG 343 (396)
Q Consensus 313 ~~~PsAFiFly~~qLFLTfs~-----gti~iWd~~g 343 (396)
... ...|.++++.++..++ +.|-+||+++
T Consensus 287 -~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 287 -EGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp -SSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred -CcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 222 3346676665554444 2588999876
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.59 E-value=0.0089 Score=52.92 Aligned_cols=178 Identities=11% Similarity=0.056 Sum_probs=115.5
Q ss_pred cccCCCCeEEeeCCCCc-EEEeecCCCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCc
Q 016020 183 ESLKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 183 ~~l~~PgfVEFDd~Ngk-Ilt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
....+|.-+-||+ +|+ ++..+..++.+..||..+....+......+..|.++|+=.|++.... .--+.+|+..+|+
T Consensus 25 ~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~--~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHG--LRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETT--TTEEEEECSTTCC
T ss_pred cCCccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecC--CCeEEEEcCCCCc
Confidence 3467889999998 555 88888889999999999885555556678999999865445555443 2357889998998
Q ss_pred EEEEEEee----cccCCccchhhhhcceeeE-----ee-------------cCCeeeEEEcccceEEEecccccCCCceE
Q 016020 262 VLKVFYHL----LHRNKKVDFIEQFNEKLLV-----KQ-------------ENENLQILDVRNAELMEVSRTEFMTPSAF 319 (396)
Q Consensus 262 ~l~s~~~~----L~~sk~i~FiE~~~ekLLI-----KQ-------------ed~~L~I~Dv~~~ki~~v~~t~~~~PsAF 319 (396)
...-+... ..+-..+.|-+ .| .|++ .. .+..|-.+|.. +++..+ ......|...
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~-~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~gi 177 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAP-DG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP-IRDRVKPNGL 177 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECT-TS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE-ECCCSSEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECC-CC-CEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe-ecCCCCCccE
Confidence 65432211 11122355555 44 4555 22 13345555554 555544 4567788999
Q ss_pred EEeecCeEEEEEEc-CeEEEEecc--cce---eeeeccccccCCC----CCCCcEEEcc
Q 016020 320 IFLYENQLFLTFRN-RTVAVWNFR--GEL---VTSFEDHLLWHPD----CNTNNIYITS 368 (396)
Q Consensus 320 iFly~~qLFLTfs~-gti~iWd~~--geL---~t~fedh~l~~~~----c~~n~~~it~ 368 (396)
.|.++++++++-+. +.|.+||.+ |.+ ...+ ......|+ -+++++|++.
T Consensus 178 ~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 178 AFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE
T ss_pred EECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc
Confidence 99999988754443 799999995 455 3344 22233343 3567788877
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.57 E-value=0.0017 Score=66.70 Aligned_cols=145 Identities=10% Similarity=0.112 Sum_probs=108.3
Q ss_pred eeCCCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCC-eEEEEEecCCCeeeeEEEEee--cCcEEEEEEe
Q 016020 193 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPG-IMLLIFNRSSSHVPLKILSIE--DGTVLKVFYH 268 (396)
Q Consensus 193 FDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg-~~Ll~~q~~~~~iplkIl~Ie--tG~~l~s~~~ 268 (396)
.|+ .+..+.....++.+.|||..+++.+-+|.- ..++.+.+||+ -.|++... ...+.++|+. +++.+.++..
T Consensus 163 ~d~-~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 163 WDL-ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp CCG-GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEEEC
T ss_pred cCC-CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC---CCeEEEEECCCCCCcEeEEEec
Confidence 554 567788888899999999999999999875 78899999965 55555543 3479999995 8888876652
Q ss_pred ecccC-Cccchhh---hhcceeeEeecC-CeeeEEEcccceEEEecccccC-----------CCceEEEeecCe-EEEEE
Q 016020 269 LLHRN-KKVDFIE---QFNEKLLVKQEN-ENLQILDVRNAELMEVSRTEFM-----------TPSAFIFLYENQ-LFLTF 331 (396)
Q Consensus 269 ~L~~s-k~i~FiE---~~~ekLLIKQed-~~L~I~Dv~~~ki~~v~~t~~~-----------~PsAFiFly~~q-LFLTf 331 (396)
+.. ..+.|.. ..|.++++..+. +.+.|+|..+.+.+++-.+..+ .+++..+++++. .+++.
T Consensus 239 --G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 239 --GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp --CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred --CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 221 2277774 489999998865 8999999999999886544332 345677777644 45666
Q ss_pred Ec-CeEEEEeccc
Q 016020 332 RN-RTVAVWNFRG 343 (396)
Q Consensus 332 s~-gti~iWd~~g 343 (396)
.+ |+|.++|...
T Consensus 317 ~~~g~v~~vd~~~ 329 (567)
T 1qks_A 317 KETGKILLVDYTD 329 (567)
T ss_dssp TTTTEEEEEETTC
T ss_pred cCCCeEEEEecCC
Confidence 55 8999999876
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.52 E-value=0.0081 Score=52.66 Aligned_cols=180 Identities=11% Similarity=0.070 Sum_probs=110.1
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEE-ec------cCceEEEEEcCCeEEEEEecCCC----------
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-IS------DKHVQEIKISPGIMLLIFNRSSS---------- 248 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lys-Is------~~~VqEIkiSpg~~Ll~~q~~~~---------- 248 (396)
..|--+.+|+-+|++...+..+ .+.+||.. .+.... .. ...+..|.++++-.+++......
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~-~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRL-GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTT-EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEEEECCC-CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 4566788888548866665544 56679988 554322 11 13588999986555555544321
Q ss_pred ---eeeeEEEEeecCcEEEEEEeecccCCccchh----hhhcceeeEee-cCCeeeEEEcc-cceE-----EEeccccc-
Q 016020 249 ---HVPLKILSIEDGTVLKVFYHLLHRNKKVDFI----EQFNEKLLVKQ-ENENLQILDVR-NAEL-----MEVSRTEF- 313 (396)
Q Consensus 249 ---~iplkIl~IetG~~l~s~~~~L~~sk~i~Fi----E~~~ekLLIKQ-ed~~L~I~Dv~-~~ki-----~~v~~t~~- 313 (396)
..-+..++.. |+....... +.....+.|. + .++.|++-. .+..|.+||+. ++++ .....++.
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~~~-~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVDTA-FQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEEEE-ESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred cCCCCeEEEECCC-CCEEEeccC-CCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC
Confidence 1334444443 554432221 1222335555 4 566777764 67899999987 5553 22222333
Q ss_pred CCCceEEEeecCeEEEEEE-cCeEEEEecc-cceeeeeccccccCCC---CCCCc-EEEccCC
Q 016020 314 MTPSAFIFLYENQLFLTFR-NRTVAVWNFR-GELVTSFEDHLLWHPD---CNTNN-IYITSDQ 370 (396)
Q Consensus 314 ~~PsAFiFly~~qLFLTfs-~gti~iWd~~-geL~t~fedh~l~~~~---c~~n~-~~it~~q 370 (396)
..|....+.++++++++-. ++.|..||.+ |+++..+..+..+... .++++ +|++...
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 5688988999999999876 4899999999 8876666544222111 35666 8887765
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.48 E-value=0.014 Score=50.22 Aligned_cols=173 Identities=12% Similarity=0.124 Sum_probs=111.8
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec--cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcE
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs--~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
...|--+.+|+ +|.+......++.+.+||...-...+.+. ...+..|.+.++=.|++..... --+..++. +|+.
T Consensus 56 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 56 DAKVMCLTISS-DGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNG--NRIGRITD-DGKI 131 (299)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTT--TEEEEECT-TCCE
T ss_pred cCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCC--ceEEEECC-CCCE
Confidence 35677888997 78888877778888899987443445553 3678999998644455544332 24566777 6665
Q ss_pred EEEEEeecc-cCCc---cchhhhhcceeeEe-ecCCeeeEEEcccceEEEe-cccccCCCceEEEeecCeEEEEEE-cCe
Q 016020 263 LKVFYHLLH-RNKK---VDFIEQFNEKLLVK-QENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFR-NRT 335 (396)
Q Consensus 263 l~s~~~~L~-~sk~---i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~qLFLTfs-~gt 335 (396)
.. +. ++ .... +.+-+ .+ .|++. +.++.|..||. ++++..+ ..+....|.+..+.++++||++-. ++.
T Consensus 132 ~~-~~--~~~~~~~~~~i~~~~-~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 205 (299)
T 2z2n_A 132 RE-YE--LPNKGSYPSFITLGS-DN-ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK 205 (299)
T ss_dssp EE-EE--CSSTTCCEEEEEECT-TS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred EE-ec--CCCCCCCCceEEEcC-CC-CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce
Confidence 42 22 12 1122 33332 33 56664 45788999999 8888765 445567788988988999999876 489
Q ss_pred EEEEecccceee-eeccccccCCC----CCCCcEEEcc
Q 016020 336 VAVWNFRGELVT-SFEDHLLWHPD----CNTNNIYITS 368 (396)
Q Consensus 336 i~iWd~~geL~t-~fedh~l~~~~----c~~n~~~it~ 368 (396)
|..||..|++.. .+..+. ..+. -+++++|++.
T Consensus 206 i~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 206 IGRITTSGEITEFKIPTPN-ARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp EEEECTTCCEEEEECSSTT-CCEEEEEECSTTCEEEEE
T ss_pred EEEECCCCcEEEEECCCCC-CCceeEEECCCCCEEEec
Confidence 999999776443 122111 1111 3567788886
No 197
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.47 E-value=0.061 Score=53.06 Aligned_cols=215 Identities=8% Similarity=-0.006 Sum_probs=114.2
Q ss_pred CceEEEEeeecCCCeEEEEEeEecCC---CceeeeEeeehhhhhhCCC---CCCCcce-eecccCCCCeEEeeCCCCcEE
Q 016020 129 DEVIRSLFYNKNNDSLITVSVYASDN---FSSLKCRSTKIEYIRRGKP---DSGFALF-ESESLKWPGFVEFDDVNGKVL 201 (396)
Q Consensus 129 ~evIrsifyN~~n~slI~vSv~~sd~---~s~L~cr~~~~~~i~~gk~---~~~~~LF-~~~~l~~PgfVEFDd~NgkIl 201 (396)
...+.++-++.+...|+++|.-..++ -..-+.+..+. ..+.. .....|. ... .+...+.|++ +|+.|
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~l~~~~~--~~~~~~~~Sp-DG~~l 202 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL---DGSAAADRSAVRELSDDAH--RFVTGPRLSP-DGRQA 202 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET---TSTTTTCGGGSEESSCSCS--SEECCCEECT-TSSEE
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC---CCCccccCCceeEEEecCC--CcccCceECC-CCCEE
Confidence 34567788888888888876432110 01122223322 11000 0112233 111 1223456887 89988
Q ss_pred EeecCC--------CeEEEEecc-Cc--eEEEEec---cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEE
Q 016020 202 TYSAQD--------SIYKVFDLK-NY--TMLYSIS---DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFY 267 (396)
Q Consensus 202 t~~a~d--------~~YrVwdlk-nY--s~lysIs---~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~ 267 (396)
++.+.+ ..+.+||+. +. .....+. ...+..+.+||+--+++.........|.++++.+|+....+.
T Consensus 203 a~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 203 VWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp EEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC
T ss_pred EEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc
Confidence 877754 489999999 56 2344443 368999999964435555555555667777777776543221
Q ss_pred eeccc--------CCccchhhhhcceeeEeecCCeeeEE--EcccceEEEecccccCCCceEEEeecCeEEEEEEc--Ce
Q 016020 268 HLLHR--------NKKVDFIEQFNEKLLVKQENENLQIL--DVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN--RT 335 (396)
Q Consensus 268 ~~L~~--------sk~i~FiE~~~ekLLIKQed~~L~I~--Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~--gt 335 (396)
..-.. ...+.|.+ .+..++...+ ...+|| |+.++++..+. .+......+.-...+.++++.++ ..
T Consensus 283 ~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~s~~~~~~~~~~~~~~~~ 359 (662)
T 3azo_A 283 REEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGELVDAA-GPWTEWAATLTVSGTRAVGVAASPRTA 359 (662)
T ss_dssp CSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTEEEECC-SSCCEEEEEEEEETTEEEEEEEETTEE
T ss_pred ccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCcEEEec-CCCCeEEEEEecCCCEEEEEEcCCCCC
Confidence 10000 11234444 5666677777 888999 77778865543 33333343311234455555554 34
Q ss_pred EEEE--eccc-ceeeeeccc
Q 016020 336 VAVW--NFRG-ELVTSFEDH 352 (396)
Q Consensus 336 i~iW--d~~g-eL~t~fedh 352 (396)
.++| |..+ ++....+.|
T Consensus 360 ~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 360 YEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp EEEEEEETTTCCEEEEESCC
T ss_pred CEEEEEECCCCceEEeecCC
Confidence 4555 5545 443333333
No 198
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.46 E-value=0.0063 Score=54.92 Aligned_cols=179 Identities=12% Similarity=0.120 Sum_probs=114.7
Q ss_pred CCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc------CceEEEEEcCCeEEEEEecCC-------------
Q 016020 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD------KHVQEIKISPGIMLLIFNRSS------------- 247 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~------~~VqEIkiSpg~~Ll~~q~~~------------- 247 (396)
.|.-+.+|+ +|++++.+..++.+.+||.. .+...-... ..+.++.++|+=.+.+..+.-
T Consensus 87 ~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 87 FTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred ccceeeECC-CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccc
Confidence 356678887 78988887777888888875 443221111 235678888665566653211
Q ss_pred --CeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecC------CeeeEEEcccceEEE---ecccccCCC
Q 016020 248 --SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN------ENLQILDVRNAELME---VSRTEFMTP 316 (396)
Q Consensus 248 --~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed------~~L~I~Dv~~~ki~~---v~~t~~~~P 316 (396)
...-+-.++..+|+...-. .+....-+.|.+ .+..|++...+ ..|.+||+..+.+.. ........|
T Consensus 165 ~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p 241 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP 241 (305)
T ss_dssp SSSCEEEEEECSSSCCCEEEE--EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC
T ss_pred ccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC
Confidence 1234556666677755433 233334578877 78888887665 689999998654321 112234568
Q ss_pred ceEEEeecCeEEEEEEcCeEEEEecccceeeeeccccccCCC---C-CCCcEEEccCCcE
Q 016020 317 SAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPD---C-NTNNIYITSDQDL 372 (396)
Q Consensus 317 sAFiFly~~qLFLTfs~gti~iWd~~geL~t~fedh~l~~~~---c-~~n~~~it~~qd~ 372 (396)
..+.+-.+++|+++- .+.|.+||.+|+++..+.-+. ...+ . ..+.+|||+...|
T Consensus 242 dgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp CSEEECTTSCEEECC-SSEEEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred CeEEECCCCCEEEec-CCcEEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 889999999999887 456999999998777665443 1111 1 2346888877544
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.45 E-value=0.0031 Score=59.33 Aligned_cols=135 Identities=12% Similarity=0.095 Sum_probs=94.8
Q ss_pred CCCeEEEEeccCceEEEEeccCceEEEEEcCC-eEEEEEec-------CCCeeeeEEEEeecCcEEEEEEeecc------
Q 016020 206 QDSIYKVFDLKNYTMLYSISDKHVQEIKISPG-IMLLIFNR-------SSSHVPLKILSIEDGTVLKVFYHLLH------ 271 (396)
Q Consensus 206 ~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg-~~Ll~~q~-------~~~~iplkIl~IetG~~l~s~~~~L~------ 271 (396)
.|+.+.|||.++.+.+-.|.....-.|.+||+ -.|.+... ....-.+.+||+.+++.+..+...-.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 37799999999999998988744449999965 45555542 11245688999999999998773211
Q ss_pred cCCccchhhhhcceeeEeec--CCeeeEEEcccceEEEe-cccccCCCceEEEeecC-eEEEEEEc-CeEEEEeccc
Q 016020 272 RNKKVDFIEQFNEKLLVKQE--NENLQILDVRNAELMEV-SRTEFMTPSAFIFLYEN-QLFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 272 ~sk~i~FiE~~~ekLLIKQe--d~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~-qLFLTfs~-gti~iWd~~g 343 (396)
.-..+.|.+ .|.+|++... +..+.+||+.+++.+.. .+....++ ..+.+++ ..|++++. |++.+|++..
T Consensus 109 ~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~--v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 109 YDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWS--VIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEE--EEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcce--eEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 112366666 8999999875 57899999999998875 44433222 3344543 66777776 8888888753
No 200
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.43 E-value=0.00078 Score=60.63 Aligned_cols=151 Identities=12% Similarity=0.061 Sum_probs=92.0
Q ss_pred CCeEEeeCCCCcEEEeecCC---CeEEEEeccCceEEEEeccC--ceE-EEEEcCCeEEEEEecCCCeeeeEEEEeecCc
Q 016020 188 PGFVEFDDVNGKVLTYSAQD---SIYKVFDLKNYTMLYSISDK--HVQ-EIKISPGIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d---~~YrVwdlknYs~lysIs~~--~Vq-EIkiSpg~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
+.-+.|.+ +|+.|++...+ ..+.+||+.+.+.. .+... .+. .+.|||+--.|++..... -+.+|++.+|+
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~--~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNEL--NLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTT--EEEEEETTTCC
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceECCCCCEEEEEEcCC--cEEEEECCCCC
Confidence 33445776 78888776543 47888999988743 44432 222 278897654444443333 58899999988
Q ss_pred EEEEEEeecc---cCCc----------------cchhhhhcceeeEe-----ecCCeeeEEEcccceEEEecccccCCCc
Q 016020 262 VLKVFYHLLH---RNKK----------------VDFIEQFNEKLLVK-----QENENLQILDVRNAELMEVSRTEFMTPS 317 (396)
Q Consensus 262 ~l~s~~~~L~---~sk~----------------i~FiE~~~ekLLIK-----Qed~~L~I~Dv~~~ki~~v~~t~~~~Ps 317 (396)
....+...-. .++. +.|.+ .++++++. ..+..|.+||+.+++...+. .+...+.
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~ 191 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLG 191 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccc
Confidence 6554431100 0011 22332 34444433 35668999999999988765 3455677
Q ss_pred eEEEee-cCeEEEEEEc-------CeEEEEecccc
Q 016020 318 AFIFLY-ENQLFLTFRN-------RTVAVWNFRGE 344 (396)
Q Consensus 318 AFiFly-~~qLFLTfs~-------gti~iWd~~ge 344 (396)
...|.+ +++.++..++ ..|-+||++|.
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCC
Confidence 888999 6775444444 25788888774
No 201
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.42 E-value=0.0015 Score=59.08 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=92.5
Q ss_pred EeeCCCCcEEEeecC-CC--eEEEEeccCceEEEEecc--CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEE
Q 016020 192 EFDDVNGKVLTYSAQ-DS--IYKVFDLKNYTMLYSISD--KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVF 266 (396)
Q Consensus 192 EFDd~NgkIlt~~a~-d~--~YrVwdlknYs~lysIs~--~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~ 266 (396)
.|.+ +|+.|++.+. ++ .+.+||+.+.+..-.... ..+....+||+--.|++.... -.+.+|++++|+....+
T Consensus 42 ~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~--~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 42 CFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG--RNLMRVDLATLEENVVY 118 (388)
T ss_dssp CBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT--TEEEEEETTTCCEEEEE
T ss_pred cCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC--CeEEEEECCCCcceeee
Confidence 4566 7887887776 66 377789988875433332 233367899766444554432 36889999999887654
Q ss_pred EeecccCCc---cchh-hhhcceeeE----------------------eecCCeeeEEEcccceEEEecccccCCCceEE
Q 016020 267 YHLLHRNKK---VDFI-EQFNEKLLV----------------------KQENENLQILDVRNAELMEVSRTEFMTPSAFI 320 (396)
Q Consensus 267 ~~~L~~sk~---i~Fi-E~~~ekLLI----------------------KQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFi 320 (396)
.. + ... ..|. -..+.+|+. ...+..|.+||+.+++...+... ........
T Consensus 119 ~~--~-~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~ 194 (388)
T 3pe7_A 119 QV--P-AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQWLGHPI 194 (388)
T ss_dssp EC--C-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SSCEEEEE
T ss_pred ec--h-hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-CccccccE
Confidence 41 1 111 1121 223444432 23457899999999998876543 34567888
Q ss_pred Eee-cCeEEEEEEcC-------eEEEEecccc
Q 016020 321 FLY-ENQLFLTFRNR-------TVAVWNFRGE 344 (396)
Q Consensus 321 Fly-~~qLFLTfs~g-------ti~iWd~~ge 344 (396)
|++ +++.++..+++ .+-+||.+|.
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 195 YRPYDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp EETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred ECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 999 88876666643 6677777774
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.35 E-value=0.033 Score=47.94 Aligned_cols=175 Identities=13% Similarity=0.084 Sum_probs=112.0
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec--cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcE
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs--~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
+..|.-+.+|+ +|.+...+..++.+.+||...-...+.++ ...+..|.+.++-.|.+.....+ -+..++.. |+.
T Consensus 61 ~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~--~i~~~~~~-g~~ 136 (300)
T 2qc5_A 61 DAKVMCLIVSS-LGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGD--RIGKLTAD-GTI 136 (300)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT--EEEEECTT-SCE
T ss_pred CCcceeEEECC-CCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCC--eEEEECCC-CCE
Confidence 45788888986 78888877777888999988444445554 36789999985444555544322 35566665 655
Q ss_pred EEEEEeecc-cCCc---cchhhhhcceeeEee-cCCeeeEEEcccceEEEe-cccccCCCceEEEeecCeEEEEEEc-Ce
Q 016020 263 LKVFYHLLH-RNKK---VDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFRN-RT 335 (396)
Q Consensus 263 l~s~~~~L~-~sk~---i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~qLFLTfs~-gt 335 (396)
. .+. ++ .... +.+-+ .+. |++.. .+..|..||. +++.... .+.....|.+..+-++++||++-.. +.
T Consensus 137 ~-~~~--~~~~~~~~~~i~~d~-~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 210 (300)
T 2qc5_A 137 Y-EYD--LPNKGSYPAFITLGS-DNA-LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK 210 (300)
T ss_dssp E-EEE--CSSTTCCEEEEEECT-TSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred E-Ecc--CCCCCCCceeEEECC-CCC-EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE
Confidence 4 222 22 1112 33333 344 66665 4678999999 7776664 3355667889888889999998875 68
Q ss_pred EEEEecccceee-eeccccccCCC----CCCCcEEEccCC
Q 016020 336 VAVWNFRGELVT-SFEDHLLWHPD----CNTNNIYITSDQ 370 (396)
Q Consensus 336 i~iWd~~geL~t-~fedh~l~~~~----c~~n~~~it~~q 370 (396)
|..||..|++.. .+..+. ..|. -+++++|++...
T Consensus 211 i~~~~~~g~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 211 IGRITTTGEISEYDIPTPN-ARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp EEEECTTCCEEEEECSSTT-CCEEEEEECSTTCEEEEETT
T ss_pred EEEEcCCCcEEEEECCCCC-CCceEEEECCCCCEEEeccC
Confidence 999999886544 222221 1111 345778888744
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.34 E-value=0.029 Score=51.56 Aligned_cols=161 Identities=12% Similarity=0.036 Sum_probs=100.3
Q ss_pred CCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec------cCceEEEEEcCCeEEEEEecCC--CeeeeEEEEee
Q 016020 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS------DKHVQEIKISPGIMLLIFNRSS--SHVPLKILSIE 258 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs------~~~VqEIkiSpg~~Ll~~q~~~--~~iplkIl~Ie 258 (396)
.|..+-+++ +|++++.. +.-+.+||.++.+...-.. ...+.+++++|+-.+++..... ..-.-.||.+.
T Consensus 91 ~v~~i~~~~-dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 91 MGSALAKIS-DSKQLIAS--DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp CEEEEEEEE-TTEEEEEE--TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred cceEEEEeC-CCeEEEEE--CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 466777887 57777654 3347788998877432222 1358899999654444433211 01123455555
Q ss_pred cCcEEEEEEeecccCCccchhhhhcceeeEe-ecCCeeeEEEcc--cc-eE-----EEecccccCCCceEEEeecCeEEE
Q 016020 259 DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVR--NA-EL-----MEVSRTEFMTPSAFIFLYENQLFL 329 (396)
Q Consensus 259 tG~~l~s~~~~L~~sk~i~FiE~~~ekLLIK-Qed~~L~I~Dv~--~~-ki-----~~v~~t~~~~PsAFiFly~~qLFL 329 (396)
+|+...-.. -+.....+.|.+ .++.|++- ..+..|.+||+. ++ ++ .....+....|..+.+-.++.|++
T Consensus 168 ~g~~~~~~~-~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 168 KGKVTKLFA-DISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp TTEEEEEEE-EESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE
T ss_pred CCcEEEeeC-CCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE
Confidence 665433222 122333467766 67777665 456889999986 66 42 222223345688888888999999
Q ss_pred EEEc-CeEEEEecccceeeeeccc
Q 016020 330 TFRN-RTVAVWNFRGELVTSFEDH 352 (396)
Q Consensus 330 Tfs~-gti~iWd~~geL~t~fedh 352 (396)
+-.. +.|..||.+|+++..+.-+
T Consensus 246 a~~~~~~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 246 ARWGEGAVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp EEETTTEEEEECTTCCEEEEEECS
T ss_pred EEeCCCEEEEECCCCCEEEEEECC
Confidence 8765 8999999999877766543
No 204
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.32 E-value=0.095 Score=48.07 Aligned_cols=261 Identities=14% Similarity=0.169 Sum_probs=155.1
Q ss_pred eccchhhhhhccccceeeeccccceEEEecCCC---------CceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 016020 96 AARDIVFALAHSGVCAAFSRETNRRICFLNVSP---------DEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (396)
Q Consensus 96 ~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~---------~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 166 (396)
.+++.|++....|.-.|||..||+.+=..+... ..+..++-.. ++.+++.+ .+ ..|.|--.
T Consensus 51 v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~---~~--g~l~a~d~--- 120 (376)
T 3q7m_A 51 LADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS--GGHVYIGS---EK--AQVYALNT--- 120 (376)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE--TTEEEEEE---TT--SEEEEEET---
T ss_pred EECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe--CCEEEEEc---CC--CEEEEEEC---
Confidence 357888888888899999999999886666543 1233333333 24444422 11 23333221
Q ss_pred hhhhCCCCCCCcceee----cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCc-e------EEEEEc
Q 016020 167 YIRRGKPDSGFALFES----ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKH-V------QEIKIS 235 (396)
Q Consensus 167 ~i~~gk~~~~~~LF~~----~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~-V------qEIkiS 235 (396)
. .|..+.+. .....|- .+ +|++++ ...++.+..+|.++.+.+.+..... + ....+.
T Consensus 121 --~-----tG~~~W~~~~~~~~~~~p~---~~--~~~v~v-~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 121 --S-----DGTVAWQTKVAGEALSRPV---VS--DGLVLI-HTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp --T-----TCCEEEEEECSSCCCSCCE---EE--TTEEEE-ECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred --C-----CCCEEEEEeCCCceEcCCE---EE--CCEEEE-EcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 1 22223221 1222332 22 355554 3457888899999999888776521 1 334445
Q ss_pred CCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCC-------ccchh-hhhcceeeEeecCCeeeEEEcccceEEE
Q 016020 236 PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNK-------KVDFI-EQFNEKLLVKQENENLQILDVRNAELME 307 (396)
Q Consensus 236 pg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk-------~i~Fi-E~~~ekLLIKQed~~L~I~Dv~~~ki~~ 307 (396)
+|.+++- . ..-.+..+|.+||+.+-......+... .+.-. ...++.+++...++.|.++|..+++.+-
T Consensus 188 ~~~v~~g--~--~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 188 FGAAVVG--G--DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMW 263 (376)
T ss_dssp TTEEEEC--C--TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEE
T ss_pred CCEEEEE--c--CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEe
Confidence 6654432 1 124678899999999887763211100 01001 1246889999999999999999998875
Q ss_pred ecccccCCCceEEEeecCeEEEEEEcCeEEEEecc-cceeeeec---cccccCCCCCCCcEEEccCCcEEEEeccCCCCC
Q 016020 308 VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFE---DHLLWHPDCNTNNIYITSDQDLIISYCKAEPED 383 (396)
Q Consensus 308 v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~-geL~t~fe---dh~l~~~~c~~n~~~it~~qd~ii~~~~~~~~~ 383 (396)
..... . ..-....++.+|++-.+|.+..+|.+ |+++-..+ ......|--.++.+|+.....-+..+=...+.-
T Consensus 264 ~~~~~--~-~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 264 KRELG--S-VNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp EECCC--C-EEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCE
T ss_pred eccCC--C-CCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcE
Confidence 43321 1 22345678889998888999999975 56554443 233334445678888888777777665555554
Q ss_pred ccc
Q 016020 384 QWM 386 (396)
Q Consensus 384 ~~~ 386 (396)
.|.
T Consensus 341 ~~~ 343 (376)
T 3q7m_A 341 VAQ 343 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 453
No 205
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.30 E-value=0.047 Score=55.42 Aligned_cols=206 Identities=14% Similarity=0.143 Sum_probs=120.8
Q ss_pred eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcc-eeecccCCCCeEEeeCCCCcEEEeecCCCe
Q 016020 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFAL-FESESLKWPGFVEFDDVNGKVLTYSAQDSI 209 (396)
Q Consensus 131 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~L-F~~~~l~~PgfVEFDd~NgkIlt~~a~d~~ 209 (396)
.+.++-+..+...|.+.+.....+-..| +.. ++.-|+. .++ .... ..+-+.|.+ .|+-++|...++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i--~v~---d~~tg~~---~~~~~~~~---~~~~~~wsp-Dg~~l~~~~~~~~ 193 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTI--KFM---KVDGAKE---LPDVLERV---KFSCMAWTH-DGKGMFYNAYPQQ 193 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEE--EEE---ETTTTEE---EEEEEEEE---CSCCEEECT-TSSEEEEEECCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEE--EEE---ECCCCCC---CcccccCc---ccceEEEEe-CCCEEEEEEECCc
Confidence 4666777776666666554433221222 222 2222221 011 1111 134577887 7898998887766
Q ss_pred ----------------EEEEeccCce----EEEEecc--CceEEEEEcCCe-EEEEEec-CCC-eeeeEEEEeec-----
Q 016020 210 ----------------YKVFDLKNYT----MLYSISD--KHVQEIKISPGI-MLLIFNR-SSS-HVPLKILSIED----- 259 (396)
Q Consensus 210 ----------------YrVwdlknYs----~lysIs~--~~VqEIkiSpg~-~Ll~~q~-~~~-~iplkIl~Iet----- 259 (396)
+.+|++.+.. ++|+-.+ ..+..+.+||+- .|++... ... .--+.++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc
Confidence 8899998865 6777654 347789999754 3444332 221 46788899988
Q ss_pred -Cc-EEEEEEeecccCCc-cchhhhhcceeeEeecC----CeeeEEEcccce---EEEeccc-ccCCCceEEEeecCeEE
Q 016020 260 -GT-VLKVFYHLLHRNKK-VDFIEQFNEKLLVKQEN----ENLQILDVRNAE---LMEVSRT-EFMTPSAFIFLYENQLF 328 (396)
Q Consensus 260 -G~-~l~s~~~~L~~sk~-i~FiE~~~ekLLIKQed----~~L~I~Dv~~~k---i~~v~~t-~~~~PsAFiFly~~qLF 328 (396)
|+ ....+. .+... .......|+.|++.... ..|.+||+.+++ ...+... .......+.|.+++.|+
T Consensus 274 ~~~~~~~~l~---~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 274 TGILKWVKLI---DNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLV 350 (710)
T ss_dssp CSSCCCEEEE---CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEE
T ss_pred CCccceEEee---CCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEE
Confidence 64 344443 22222 22233478889887753 359999998874 2333222 22355667777788898
Q ss_pred EEEEc-C--eEEEEec-ccceeeeecc
Q 016020 329 LTFRN-R--TVAVWNF-RGELVTSFED 351 (396)
Q Consensus 329 LTfs~-g--ti~iWd~-~geL~t~fed 351 (396)
++.+. + .+.+||+ .|+.+..+..
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~ 377 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPL 377 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECC
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCC
Confidence 88876 5 4666777 6765555543
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.23 E-value=0.092 Score=45.91 Aligned_cols=222 Identities=14% Similarity=0.155 Sum_probs=125.2
Q ss_pred hccccceeeeccccceEEEecC---CCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC-Ccce
Q 016020 105 AHSGVCAAFSRETNRRICFLNV---SPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG-FALF 180 (396)
Q Consensus 105 ~~sG~c~af~~~t~~~ic~lN~---s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~-~~LF 180 (396)
...|.-..||..+|+..-+..+ ....-+.++.+...+..|.+++. . ..|.. .+. . |+...- ....
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---~--~~l~~--~d~---~-g~~~~~~~~~~ 111 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---R--LGLLV--VQT---D-GTFEEIAKKDS 111 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---T--TEEEE--EET---T-SCEEECCSBCT
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---C--CCEEE--EeC---C-CCEEEEEeccC
Confidence 4455566777777776544331 12234677887765355555332 1 12332 211 1 221000 0011
Q ss_pred eecccCCCCeEEeeCCCCcEEEeecCC---------------CeEEEEeccCceEEEEecc-CceEEEEEc----CCe-E
Q 016020 181 ESESLKWPGFVEFDDVNGKVLTYSAQD---------------SIYKVFDLKNYTMLYSISD-KHVQEIKIS----PGI-M 239 (396)
Q Consensus 181 ~~~~l~~PgfVEFDd~NgkIlt~~a~d---------------~~YrVwdlknYs~lysIs~-~~VqEIkiS----pg~-~ 239 (396)
......+|--+.+|+ +|++...+..+ +.+..||.. .+....+.. .....+.++ |+- .
T Consensus 112 ~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~ 189 (314)
T 1pjx_A 112 EGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQ 189 (314)
T ss_dssp TSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEE
T ss_pred CCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCE
Confidence 123346788999998 77877766554 455556655 443322222 456778888 664 5
Q ss_pred EEEEecCCCeeeeEEEEee-cCcEEEE-EEeeccc---C--CccchhhhhcceeeEe-ecCCeeeEEEcccceEEEeccc
Q 016020 240 LLIFNRSSSHVPLKILSIE-DGTVLKV-FYHLLHR---N--KKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRT 311 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~Ie-tG~~l~s-~~~~L~~---s--k~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~t 311 (396)
|.+..... --+.+|++. +|+.... ....++. . ..+.+-+ .| .|++. ..++.|.+||..+++.......
T Consensus 190 l~v~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G-~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 190 LIVAETPT--KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DN-NLLVANWGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp EEEEETTT--TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TC-CEEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred EEEEECCC--CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CC-CEEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence 55555442 346778887 5653221 1111111 1 1144443 44 55555 4678899999997777665555
Q ss_pred ccCCCceEEEeecCe-EEEEEEc-CeEEEEeccc
Q 016020 312 EFMTPSAFIFLYENQ-LFLTFRN-RTVAVWNFRG 343 (396)
Q Consensus 312 ~~~~PsAFiFly~~q-LFLTfs~-gti~iWd~~g 343 (396)
....|.+..|.++++ ||++-.. +.|..|+...
T Consensus 266 ~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 266 PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 567899999988888 8887665 7888888764
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.09 E-value=0.022 Score=58.41 Aligned_cols=179 Identities=16% Similarity=0.074 Sum_probs=122.4
Q ss_pred CCCeEEeeCCCCcEEEeecCCCeEEEEecc--CceEEEEecc-CceEEEEEc-----CCeEEEEEecCCCeeeeEEEEee
Q 016020 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSISD-KHVQEIKIS-----PGIMLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d~~YrVwdlk--nYs~lysIs~-~~VqEIkiS-----pg~~Ll~~q~~~~~iplkIl~Ie 258 (396)
.|-.+.|++ .|+-+-....|+.+.+||+. +.+.+.+|.. .+-..|.+| +|-.|++.....+. +.|+|..
T Consensus 198 ~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~--v~ViD~~ 274 (567)
T 1qks_A 198 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ--YVIMDGE 274 (567)
T ss_dssp CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTE--EEEEETT
T ss_pred CccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCe--EEEEECC
Confidence 366889998 67765555678999999996 8898989875 778899999 68788887776544 4688999
Q ss_pred cCcEEEEEEeec--------c---cCCccchhhhhcceeeEeecCCeeeEEEcccceEEEe-cccccCCCceEEEeecCe
Q 016020 259 DGTVLKVFYHLL--------H---RNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 259 tG~~l~s~~~~L--------~---~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~q 326 (396)
|++.++.+...- | +-..+-+.....+.++.-.+++.|.++|..+.+-.++ .......|..+-|.+++.
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 999998765210 0 1112333333345556667788899999877532221 112334566788999999
Q ss_pred EEEEEEc--CeEEEEeccc-ceeeeecc-ccccCCC------CCC-CcEEEcc
Q 016020 327 LFLTFRN--RTVAVWNFRG-ELVTSFED-HLLWHPD------CNT-NNIYITS 368 (396)
Q Consensus 327 LFLTfs~--gti~iWd~~g-eL~t~fed-h~l~~~~------c~~-n~~~it~ 368 (396)
.|++..+ ++|.+||+.. +++..++= -.-+||. -++ +.+|+|.
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATS 407 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeC
Confidence 8877765 8999999987 67776653 2334442 333 6678775
No 208
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.09 E-value=0.02 Score=50.52 Aligned_cols=179 Identities=15% Similarity=0.089 Sum_probs=114.6
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecCc
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
.++|.-+.+|+.++.+...+...+.+.++|+.+-.....+.. .....|.+++ +-.|.+.....+. +..++.. |+
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~--I~~~~~~-g~ 111 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDR--IEVAKMD-GT 111 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTE--EEEEETT-SC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCE--EEEEEcC-CC
Confidence 468899999998999999999999999999987654333433 5788999986 4455555554333 4455653 43
Q ss_pred EEEEEEe-ecccCCccchhhhhcceeeEeecC---CeeeEEEcccceEEEecccccCCCceEEEeec-CeEEEEEEc-Ce
Q 016020 262 VLKVFYH-LLHRNKKVDFIEQFNEKLLVKQEN---ENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFRN-RT 335 (396)
Q Consensus 262 ~l~s~~~-~L~~sk~i~FiE~~~ekLLIKQed---~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~-~qLFLTfs~-gt 335 (396)
....+.. -+..-..+.+-+ .+.+|++-..+ ..|..+++.......+.......|....+.++ +.||++=+. +.
T Consensus 112 ~~~~~~~~~~~~P~~i~vd~-~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTDP-VRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp SCEEEECSSCSSEEEEEEET-TTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CEEEEEECCCCCccEEEEee-CCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 3322210 011112244433 46788877654 57778887544433344455678999999985 678888877 89
Q ss_pred EEEEecccc-eeeeeccccccCCC---CCCCcEEEccC
Q 016020 336 VAVWNFRGE-LVTSFEDHLLWHPD---CNTNNIYITSD 369 (396)
Q Consensus 336 i~iWd~~ge-L~t~fedh~l~~~~---c~~n~~~it~~ 369 (396)
|..+|.+|. +.+.++. +.+|+ ...+.+|++.-
T Consensus 191 I~~~~~~g~~~~~~~~~--~~~P~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEG--LQYPFAVTSYGKNLYYTDW 226 (267)
T ss_dssp EEEEETTEEEEEEEEEC--CCSEEEEEEETTEEEEEET
T ss_pred EEEEecCCCceEEEecC--CCCceEEEEeCCEEEEEEC
Confidence 999999984 4333332 22333 23566777654
No 209
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.09 E-value=0.0019 Score=65.59 Aligned_cols=150 Identities=9% Similarity=0.088 Sum_probs=94.8
Q ss_pred CeEEeeCCCCcEEEeecC-----CCeEEEEeccCceEE-E-EeccCceEEEEEcCCeEEEEEecCCC-----------ee
Q 016020 189 GFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTML-Y-SISDKHVQEIKISPGIMLLIFNRSSS-----------HV 250 (396)
Q Consensus 189 gfVEFDd~NgkIlt~~a~-----d~~YrVwdlknYs~l-y-sIs~~~VqEIkiSpg~~Ll~~q~~~~-----------~i 250 (396)
+-+.|.+ +|+.|||... +..++|||+.+.+.+ - .+.+.....+.|||+--.+++..... .-
T Consensus 124 ~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 124 GTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 4567886 8999997654 468999999999864 1 23333337899997754444443311 23
Q ss_pred eeEEEEeecCcEEEEEEeecccC----CccchhhhhcceeeEeecCC----eeeEEEcccceEEEecccccCCCceEEEe
Q 016020 251 PLKILSIEDGTVLKVFYHLLHRN----KKVDFIEQFNEKLLVKQENE----NLQILDVRNAELMEVSRTEFMTPSAFIFL 322 (396)
Q Consensus 251 plkIl~IetG~~l~s~~~~L~~s----k~i~FiE~~~ekLLIKQed~----~L~I~Dv~~~ki~~v~~t~~~~PsAFiFl 322 (396)
-+.+|++.+|+....+.+-.+.. ..+.|.+ .|++|++...+. .|.++|..+++...+.... ......++
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~~~~- 279 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV-GAKYEVHA- 279 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS-SCCEEEEE-
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC-CceEEEEe-
Confidence 38889999887322222111111 1367777 899999887655 6777777777776654433 33445555
Q ss_pred ecCeEEEEEEc-----CeEEEEeccc
Q 016020 323 YENQLFLTFRN-----RTVAVWNFRG 343 (396)
Q Consensus 323 y~~qLFLTfs~-----gti~iWd~~g 343 (396)
++++++++ ++ +.|.+||+++
T Consensus 280 ~~g~l~~~-s~~~~~~~~l~~~d~~~ 304 (695)
T 2bkl_A 280 WKDRFYVL-TDEGAPRQRVFEVDPAK 304 (695)
T ss_dssp ETTEEEEE-ECTTCTTCEEEEEBTTB
T ss_pred cCCcEEEE-ECCCCCCCEEEEEeCCC
Confidence 66664444 54 6899999975
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.05 E-value=0.13 Score=44.28 Aligned_cols=237 Identities=10% Similarity=0.095 Sum_probs=139.6
Q ss_pred ccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCccee-ecc
Q 016020 106 HSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFE-SES 184 (396)
Q Consensus 106 ~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~-~~~ 184 (396)
..|.-..||.. ++..-+..+....-+++|.....+. +.+ +.... ..+.. ++ .. |+. ..+. ...
T Consensus 39 ~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v-~~~~~---~~v~~--~d---~~-g~~----~~~~~~~~ 102 (300)
T 2qc5_A 39 KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWF-TENGA---NKIGK--LS---KK-GGF----TEYPLPQP 102 (300)
T ss_dssp TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEE-EETTT---TEEEE--EC---TT-SCE----EEEECSST
T ss_pred CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEE-EecCC---CeEEE--EC---CC-CCe----EEecCCCC
Confidence 45666777766 7766554444446788888875443 333 22111 11211 11 01 221 1111 112
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec--cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcE
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs--~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
...|--+.+|+ +|++...+..++.+.+||...-...+.+. ...+..|.+.++-.|.+.....+ -+..++. +|+.
T Consensus 103 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~--~i~~~~~-~g~~ 178 (300)
T 2qc5_A 103 DSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNN--SIGRITN-TGKL 178 (300)
T ss_dssp TCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT--EEEEECT-TCCE
T ss_pred CCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCC--eEEEECC-CCcE
Confidence 35688888997 78888877777888889988333335554 36788999976444555554322 3566776 6765
Q ss_pred EEEEEeeccc-CCc---cchhhhhcceeeEee-cCCeeeEEEcccceEEEe-cccccCCCceEEEeecCeEEEEEEc-Ce
Q 016020 263 LKVFYHLLHR-NKK---VDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQLFLTFRN-RT 335 (396)
Q Consensus 263 l~s~~~~L~~-sk~---i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~qLFLTfs~-gt 335 (396)
.. +. ++. ... +.+-+ .+ .|++.. .+..|..||. +++.... .++....|.+..+.++++||++-.. +.
T Consensus 179 ~~-~~--~~~~~~~~~~i~~d~-~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 252 (300)
T 2qc5_A 179 EE-YP--LPTNAAAPVGITSGN-DG-ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ 252 (300)
T ss_dssp EE-EE--CSSTTCCEEEEEECT-TS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred EE-ee--CCCCCCCcceEEECC-CC-CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe
Confidence 53 32 221 111 33333 34 566665 4567999999 7776664 3456778999999999999998865 89
Q ss_pred EEEEecccceee-eeccccccCCC----CCCCcEEEccC
Q 016020 336 VAVWNFRGELVT-SFEDHLLWHPD----CNTNNIYITSD 369 (396)
Q Consensus 336 i~iWd~~geL~t-~fedh~l~~~~----c~~n~~~it~~ 369 (396)
|..||..|++.. .+..... .+. -+++++|++..
T Consensus 253 i~~~~~~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 253 IGRITNDNTIQEYQLQTENA-EPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EEEECTTSCEEEEECCSTTC-CCCCEEECTTSCEEEECS
T ss_pred EEEECCCCcEEEEECCccCC-ccceeEeCCCCCEEEEcc
Confidence 999999886543 2322211 122 24567777665
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.05 E-value=0.0061 Score=62.49 Aligned_cols=149 Identities=10% Similarity=0.093 Sum_probs=92.9
Q ss_pred eEEeeCCCCcEEEeecCC-----CeEEEEeccCceEEEE-eccCceEEEEEcCCeEEEEEecCCC------------eee
Q 016020 190 FVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYTMLYS-ISDKHVQEIKISPGIMLLIFNRSSS------------HVP 251 (396)
Q Consensus 190 fVEFDd~NgkIlt~~a~d-----~~YrVwdlknYs~lys-Is~~~VqEIkiSpg~~Ll~~q~~~~------------~ip 251 (396)
.+.|.+ +|+.|+|...+ ..++|||+.+.+.+-. +.+..+..+.|||+ --+++..... ..-
T Consensus 167 ~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 167 AWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCE
T ss_pred eEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCE
Confidence 567886 89999887764 5799999999986432 22222368899998 5555544322 123
Q ss_pred eEEEEeecCcEEEEEEeecccC----CccchhhhhcceeeEeecC-----CeeeEEEcccc--e-EEEecccccCCCceE
Q 016020 252 LKILSIEDGTVLKVFYHLLHRN----KKVDFIEQFNEKLLVKQEN-----ENLQILDVRNA--E-LMEVSRTEFMTPSAF 319 (396)
Q Consensus 252 lkIl~IetG~~l~s~~~~L~~s----k~i~FiE~~~ekLLIKQed-----~~L~I~Dv~~~--k-i~~v~~t~~~~PsAF 319 (396)
+.++++.+|+....+.+-.+.. ..+.|.+ .|.+|++-..+ ..|.+||+.++ + ...+.... ......
T Consensus 245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~ 322 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL-KAQWDF 322 (741)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS-SSCEEE
T ss_pred EEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC-CceEEE
Confidence 6677887776322222111111 1366776 89999988754 48999999987 6 55554333 233344
Q ss_pred EEeecCeEEEEEEc-----CeEEEEeccc
Q 016020 320 IFLYENQLFLTFRN-----RTVAVWNFRG 343 (396)
Q Consensus 320 iFly~~qLFLTfs~-----gti~iWd~~g 343 (396)
++ ++++.++..++ +.+-+||+++
T Consensus 323 ~~-~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 323 VD-GVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EE-EETTEEEEEECTTCTTCEEEEEECSS
T ss_pred Ee-ccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 44 66655555554 3589999876
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.96 E-value=0.044 Score=52.54 Aligned_cols=132 Identities=9% Similarity=-0.022 Sum_probs=93.3
Q ss_pred eEEEEeccCceEEEEeccCceEEEEEcCC-eEEEEEecC-------CCeeeeEEEEeecCcEEEEEEee-cc------cC
Q 016020 209 IYKVFDLKNYTMLYSISDKHVQEIKISPG-IMLLIFNRS-------SSHVPLKILSIEDGTVLKVFYHL-LH------RN 273 (396)
Q Consensus 209 ~YrVwdlknYs~lysIs~~~VqEIkiSpg-~~Ll~~q~~-------~~~iplkIl~IetG~~l~s~~~~-L~------~s 273 (396)
.+.|||+.+.+.+-.|..-..-.|.+||+ -.|.+.+.. +..-.+.++|..+++.+..+... .. .-
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p 127 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS 127 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 78999999999998998744449999964 566666532 11235778999999998877632 11 11
Q ss_pred CccchhhhhcceeeEeec--CCeeeEEEcccceEEEe-cccccCCCceEEEeecC-eEEEEEEc-CeEEEEeccccee
Q 016020 274 KKVDFIEQFNEKLLVKQE--NENLQILDVRNAELMEV-SRTEFMTPSAFIFLYEN-QLFLTFRN-RTVAVWNFRGELV 346 (396)
Q Consensus 274 k~i~FiE~~~ekLLIKQe--d~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~-qLFLTfs~-gti~iWd~~geL~ 346 (396)
..+.|.+ .|.+|++-.. +..|.++| .+++++.. -+ .|.+.++.+++ .+|++++. |++.+||..|+.+
T Consensus 128 ~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~ 199 (373)
T 2mad_H 128 WMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS----SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAA 199 (373)
T ss_pred cceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC----CCceEEEEeCCCceEEEEcCCCCEEEEECCCcEE
Confidence 2366666 8999999864 47799999 99988754 32 34456666654 67888776 8999999855433
No 213
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.95 E-value=0.1 Score=45.93 Aligned_cols=254 Identities=11% Similarity=0.038 Sum_probs=146.1
Q ss_pred ccchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC
Q 016020 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 176 (396)
Q Consensus 97 a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~ 176 (396)
.++.|.+.+..|--.+|| .+|+.+-... .+..++.++..-.. ..|.+ .. ++ |.+...+-+.+..-+.
T Consensus 29 ~~g~l~v~t~~~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~-g~l~v-~t---~~---l~~~d~~g~~~~~~~~--- 95 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAIN-TDGSVKWFFK-SGEIIECRPSIGKD-GTIYF-GS---DK---VYAINPDGTEKWRFDT--- 95 (330)
T ss_dssp TTSCEECSSTTTTTEEEC-TTSCEEESSC-GGGEEEECCEETTT-TEECC-SS---CE---EEEECCCGGGGGGSCC---
T ss_pred cCCeEEEEcCCCEEEEEC-CCCcEEEEEe-cCCCcccceEEecC-CcEEE-ec---Cc---EEEECCCCcEEEEEEC---
Confidence 567788888777778999 8888755433 34567788877542 33333 11 11 4443322122211111
Q ss_pred CcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEc-CCeEEEEEecCCCeeeeE
Q 016020 177 FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKIS-PGIMLLIFNRSSSHVPLK 253 (396)
Q Consensus 177 ~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiS-pg~~Ll~~q~~~~~iplk 253 (396)
....+..|. .+ +|.+.... .++.+..+|.+ .+.+++... ..+..+.+. +|.+. +... .--+.
T Consensus 96 ----~~~~~~~~~---~~--~~~l~v~t-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~-vgt~---~~~l~ 160 (330)
T 3hxj_A 96 ----KKAIVSDFT---IF--EDILYVTS-MDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIY-VGSN---DNYLY 160 (330)
T ss_dssp ---------CCEE---EE--TTEEEEEC-TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEE-EECT---TSEEE
T ss_pred ----CCCcccCce---EE--CCEEEEEe-cCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEE-EEcC---CCEEE
Confidence 111222222 22 46665533 45666677887 666655543 344555666 55543 3222 24577
Q ss_pred EEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc
Q 016020 254 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN 333 (396)
Q Consensus 254 Il~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~ 333 (396)
.++.+ |+.+..+.. +...--...+-.+..|++.. +.|..|| .+++...........+.+.....++.+++.-.+
T Consensus 161 ~~d~~-g~~~~~~~~--~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ 234 (330)
T 3hxj_A 161 AINPD-GTEKWRFKT--NDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLD 234 (330)
T ss_dssp EECTT-SCEEEEEEC--SSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETT
T ss_pred EECCC-CCEeEEEec--CCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCC
Confidence 78888 888776652 22111122222366788888 8899999 777666544444456677777778899999888
Q ss_pred CeEEEEecccceeeeecccc--ccCCCC-CCCcEEEccCCcEEEEeccCCCCCcc
Q 016020 334 RTVAVWNFRGELVTSFEDHL--LWHPDC-NTNNIYITSDQDLIISYCKAEPEDQW 385 (396)
Q Consensus 334 gti~iWd~~geL~t~fedh~--l~~~~c-~~n~~~it~~qd~ii~~~~~~~~~~~ 385 (396)
+.+-.+|..|+.+..+.... ...+-. .++++|++....-|..+= +++.-.|
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d-~~g~~~~ 288 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAIN-PDGTEKW 288 (330)
T ss_dssp TEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEEC-TTSCEEE
T ss_pred CeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEEC-CCCcEEE
Confidence 88888898887665554332 222222 378899988876777763 3433334
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.94 E-value=0.17 Score=51.80 Aligned_cols=202 Identities=12% Similarity=0.155 Sum_probs=116.4
Q ss_pred eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcc-eeecccCCCCeEEeeCCCCcEEEeecCCCe
Q 016020 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFAL-FESESLKWPGFVEFDDVNGKVLTYSAQDSI 209 (396)
Q Consensus 131 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~L-F~~~~l~~PgfVEFDd~NgkIlt~~a~d~~ 209 (396)
.+.++-...+...|.+.+.....+-.. .+.. ++.-|+. .++ ..... -+-+.|.+ . +-++|...+..
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~--i~v~---dl~tg~~---~~~~~~~~~---~~~~~wsp-D-~~l~~~~~~~~ 230 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRT--VKFV---GVADGKP---LADELKWVK---FSGLAWLG-N-DALLYSRFAEP 230 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEE--EEEE---ETTTCCE---EEEEEEEEE---SCCCEEST-T-SEEEEEECCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEE--EEEE---ECCCCCC---CCccCCCce---eccEEEEC-C-CEEEEEEecCc
Confidence 566777777777776655443322122 2222 2333332 111 01111 12355666 3 66666665443
Q ss_pred --------------EEEEeccCce----EEEEeccC--ceEEEEEcCCe-EEEEEecCC--CeeeeEEEEeecCcE--EE
Q 016020 210 --------------YKVFDLKNYT----MLYSISDK--HVQEIKISPGI-MLLIFNRSS--SHVPLKILSIEDGTV--LK 264 (396)
Q Consensus 210 --------------YrVwdlknYs----~lysIs~~--~VqEIkiSpg~-~Ll~~q~~~--~~iplkIl~IetG~~--l~ 264 (396)
+.+|++.+.. .+|.-.+. .+..+.+||+- .|++..... ..--+.++++.+|+. ..
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred ccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence 7788886654 77777664 48899999754 454444332 345788999999832 34
Q ss_pred EEEeecccC-CccchhhhhcceeeEeec----CCeeeEEEccc--ceEEEecccccCCCceEEEeecCeEEEEEEc-CeE
Q 016020 265 VFYHLLHRN-KKVDFIEQFNEKLLVKQE----NENLQILDVRN--AELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTV 336 (396)
Q Consensus 265 s~~~~L~~s-k~i~FiE~~~ekLLIKQe----d~~L~I~Dv~~--~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti 336 (396)
.+. .+. .....+...++.|++..+ +..|.+||+.+ ++...+.+.+......+-+. ++.|+++.+. ++.
T Consensus 311 ~l~---~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~ 386 (741)
T 1yr2_A 311 ALI---PDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKS 386 (741)
T ss_dssp EEE---CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEE
T ss_pred Eec---CCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEE
Confidence 333 222 222223358899998875 34599999988 45666655554445556665 7778777665 777
Q ss_pred EEEec--ccceeeee
Q 016020 337 AVWNF--RGELVTSF 349 (396)
Q Consensus 337 ~iWd~--~geL~t~f 349 (396)
.||.+ .|.....+
T Consensus 387 ~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 387 QVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEEETTSCEEEEC
T ss_pred EEEEEeCCCCceeec
Confidence 77755 46544433
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.80 E-value=0.11 Score=53.99 Aligned_cols=144 Identities=11% Similarity=0.107 Sum_probs=95.3
Q ss_pred CCCCeEEeeCCCC---cEEEeecCCCeEEEEeccCceEEEEeccCce---------------------------------
Q 016020 186 KWPGFVEFDDVNG---KVLTYSAQDSIYKVFDLKNYTMLYSISDKHV--------------------------------- 229 (396)
Q Consensus 186 ~~PgfVEFDd~Ng---kIlt~~a~d~~YrVwdlknYs~lysIs~~~V--------------------------------- 229 (396)
..|-.++... +| +.+.....++.+.++|.++.+.+..+.-..+
T Consensus 313 ~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 313 QPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (677)
T ss_dssp SCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred CCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence 4566676653 57 6777777899999999999999988763211
Q ss_pred ----EEEEEcCC--eEEEEEec---------------------------------------CCCeeeeEEEEeecCcEEE
Q 016020 230 ----QEIKISPG--IMLLIFNR---------------------------------------SSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 230 ----qEIkiSpg--~~Ll~~q~---------------------------------------~~~~iplkIl~IetG~~l~ 264 (396)
+-+.++|. ++.+-.+. ....-.|..||+.||+.+-
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 12455553 33322110 0012568899999999998
Q ss_pred EEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEE---ecccccCCCceEEEeecCeEEEEEEcC
Q 016020 265 VFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME---VSRTEFMTPSAFIFLYENQLFLTFRNR 334 (396)
Q Consensus 265 s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~---v~~t~~~~PsAFiFly~~qLFLTfs~g 334 (396)
...+-.+. .-.-+. ..++.+++...++.|.+||..|++.+. +......+|. +|..+++.|+...+|
T Consensus 472 ~~~~~~~~-~~g~~~-~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~--~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 472 SVEHVSPW-NGGTLT-TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPS--TYMVDGRQYVSVAVG 540 (677)
T ss_dssp EEEESSSC-CCCEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEEC
T ss_pred ecCCCCCC-cCcceE-eCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCE--EEEeCCEEEEEEecc
Confidence 87742211 111222 257889999999999999999999876 4444444554 446888888887655
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.67 E-value=0.061 Score=51.98 Aligned_cols=158 Identities=9% Similarity=0.037 Sum_probs=97.8
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCC-eEEEEeccCceEEEEe------ccCceEEEEEcC-CeEEEEEecCCCeeeeEEEE
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDS-IYKVFDLKNYTMLYSI------SDKHVQEIKISP-GIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~-~YrVwdlknYs~lysI------s~~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~ 256 (396)
...|. +-||+..+.+.+.+...+ .+.+||..+-..+-.+ .......+.++| +=.|++.... --+..|+
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~---~~I~~~d 246 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSN---KNFGRFN 246 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTT---CEEEEEE
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECC---CcEEEEE
Confidence 44566 899996555555555443 7888887765444445 336788999998 4444454332 3677888
Q ss_pred eecCcEEEEEEe-e---cccC--CccchhhhhcceeeEeecCCeeeEEEcccceEEEecc--------------cccCCC
Q 016020 257 IEDGTVLKVFYH-L---LHRN--KKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSR--------------TEFMTP 316 (396)
Q Consensus 257 IetG~~l~s~~~-~---L~~s--k~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~--------------t~~~~P 316 (396)
..+|+...-... . .... ..+.|.+..+.-++.-..++.|..||.... +..+.- +.+..|
T Consensus 247 ~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P 325 (409)
T 3hrp_A 247 VKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQP 325 (409)
T ss_dssp TTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSE
T ss_pred CCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCC
Confidence 888764322110 0 0111 156666633433444456778888886543 322211 226789
Q ss_pred ceEEEeecCeEEEEEE-c-CeEEEEe-cccceee
Q 016020 317 SAFIFLYENQLFLTFR-N-RTVAVWN-FRGELVT 347 (396)
Q Consensus 317 sAFiFly~~qLFLTfs-~-gti~iWd-~~geL~t 347 (396)
....|.++++||++=+ . +.|..|| -.|++.+
T Consensus 326 ~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 326 NGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp EEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 9999999999999987 4 8999999 5666443
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.63 E-value=0.26 Score=46.47 Aligned_cols=181 Identities=10% Similarity=0.043 Sum_probs=120.0
Q ss_pred EEeeCCCCcEEEeecC--CCeEEEEeccCceEEEEec--c-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 191 VEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSIS--D-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~--d~~YrVwdlknYs~lysIs--~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
++|++ +|+....+.+ ++.++++|+++.+.+-++. + ....-+.+.++.+. +..-. .--+.++|.+|++.+.+
T Consensus 26 l~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~ly-v~t~~--~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 26 LVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLY-QVVWL--KNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEE-EEETT--CSEEEEEETTTTEEEEE
T ss_pred EEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEE-EEEec--CCEEEEEECCCCcEEEE
Confidence 78887 4777666655 7899999999999988875 2 34455778777543 33333 34477899999999998
Q ss_pred EEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEeccccc-----CCCceEEEeecCeEEEEEEc-CeEEEE
Q 016020 266 FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEF-----MTPSAFIFLYENQLFLTFRN-RTVAVW 339 (396)
Q Consensus 266 ~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~-----~~PsAFiFly~~qLFLTfs~-gti~iW 339 (396)
+..- .....- +...++.|++-..+..|.++|..+.+....-.... ..|-+..|. +++||++... ++|.+=
T Consensus 102 i~~g--~~~g~g-lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 102 FTHQ--MKDGWG-LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EECC--SSSCCE-EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EECC--CCCeEE-EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 8742 112233 33378999998888999999999987766322221 135566777 8899999864 899999
Q ss_pred eccc-ceeeeecccccc-------CC-CCCCCcEEEccCCcEEEEeccC
Q 016020 340 NFRG-ELVTSFEDHLLW-------HP-DCNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 340 d~~g-eL~t~fedh~l~-------~~-~c~~n~~~it~~qd~ii~~~~~ 379 (396)
|.+. +.+..++=.-+. .+ .-.-|-|.++.+.+.+..-+|.
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 9966 666655422110 11 1223455566666655555553
No 218
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.56 E-value=0.26 Score=44.61 Aligned_cols=191 Identities=8% Similarity=-0.008 Sum_probs=116.2
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEe-cc---CceEEEEEcC-CeEEEEEecCC----------
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSI-SD---KHVQEIKISP-GIMLLIFNRSS---------- 247 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysI-s~---~~VqEIkiSp-g~~Ll~~q~~~---------- 247 (396)
...|--+-+|+.+|++...+...+ +.++|..+.+ .+... .+ ....+|++.+ +=.|.+.....
T Consensus 79 ~~~p~gi~~~~~~g~l~v~d~~~~-i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 79 CGRTYDISYNLQNNQLYIVDCYYH-LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp HCCEEEEEEETTTTEEEEEETTTE-EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCCceEEEcCCCCcEEEEECCCC-EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 346777889865788887766555 6677877653 22211 11 3467899987 32344443321
Q ss_pred -----CeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee-cCCeeeEEEcccc---eEEEecccccCCCce
Q 016020 248 -----SHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNA---ELMEVSRTEFMTPSA 318 (396)
Q Consensus 248 -----~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~---ki~~v~~t~~~~PsA 318 (396)
..--+-.++..+|+...... -+....-|.|.+ .+..|++-. .+..|..||+... +........ - |..
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~-g-P~g 233 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP-N-PGN 233 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS-S-EEE
T ss_pred hcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC-C-CCC
Confidence 12346666766676443222 234445577666 677788774 5688999998752 222211111 1 888
Q ss_pred EEEeecCeEEEEEEc-----------CeEEEEecccceeeeecccc---ccCCC---CCCCcEEEccCCcEEEEeccCC
Q 016020 319 FIFLYENQLFLTFRN-----------RTVAVWNFRGELVTSFEDHL---LWHPD---CNTNNIYITSDQDLIISYCKAE 380 (396)
Q Consensus 319 FiFly~~qLFLTfs~-----------gti~iWd~~geL~t~fedh~---l~~~~---c~~n~~~it~~qd~ii~~~~~~ 380 (396)
..+-.++.||++-.. +.|..+|-+|+++..+...- +..+. -.++++||+....=-|.-++.+
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 888889999999864 67899999999888776542 11121 1468899986544444455544
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.52 E-value=0.03 Score=53.64 Aligned_cols=108 Identities=9% Similarity=-0.077 Sum_probs=74.7
Q ss_pred CeEEEEEec-CCCee-eeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee----------cCCeeeEEEcccce
Q 016020 237 GIMLLIFNR-SSSHV-PLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ----------ENENLQILDVRNAE 304 (396)
Q Consensus 237 g~~Ll~~q~-~~~~i-plkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ----------ed~~L~I~Dv~~~k 304 (396)
+..+.+... ..+.+ .+.++|..+|+.+..+. ....-.+.|.+ ++..|++-. .+..+.+||..+.+
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~--~g~~p~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN--GGFLPNPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEEEEec--CCCCCCeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 344444443 22223 78889999999887655 23333688888 999999986 36789999999987
Q ss_pred EEEeccc----c---cCCCceEEEeecCeE-EEEEE--cCeEEEEeccc-ceeee
Q 016020 305 LMEVSRT----E---FMTPSAFIFLYENQL-FLTFR--NRTVAVWNFRG-ELVTS 348 (396)
Q Consensus 305 i~~v~~t----~---~~~PsAFiFly~~qL-FLTfs--~gti~iWd~~g-eL~t~ 348 (396)
.+..-+. . ...|..+.|.++++. |++-. +++|.++| +. +++..
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 7663222 1 357999999998775 55432 47899999 76 66666
No 220
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.50 E-value=0.29 Score=42.96 Aligned_cols=163 Identities=15% Similarity=0.158 Sum_probs=107.3
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecC
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 260 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG 260 (396)
.+.+|.-+-+|+.+|.+...+...+.+.++|+.+-....-+.. ..-..|.++| +-.|.+.....+.--+..+++ +|
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~-dg 155 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM-DG 155 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET-TS
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec-CC
Confidence 4578999999998999999999999999999975432222222 5788999997 455545544311122334444 45
Q ss_pred cEEEEEE-eecccCCccchhhhhcceeeEee-cCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeEE
Q 016020 261 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTVA 337 (396)
Q Consensus 261 ~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti~ 337 (396)
+....+. ..+..-..+.+-+ .+.+|++-. ....|..+|+..++...+.. ....|.+.- ..++.||++-.. +.|.
T Consensus 156 ~~~~~~~~~~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~~~P~gi~-~d~~~lyva~~~~~~v~ 232 (267)
T 1npe_A 156 TNRRILAQDNLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQPGRRKVLE-GLQYPFAVT-SYGKNLYYTDWKTNSVI 232 (267)
T ss_dssp CCCEEEECTTCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTEEEEEEEEE-CCCSEEEEE-EETTEEEEEETTTTEEE
T ss_pred CCcEEEEECCCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCCCceEEEec-CCCCceEEE-EeCCEEEEEECCCCeEE
Confidence 5443332 1112222355544 567787765 55789999998776655543 456777754 568899998766 8999
Q ss_pred EEecc-cceeeeec
Q 016020 338 VWNFR-GELVTSFE 350 (396)
Q Consensus 338 iWd~~-geL~t~fe 350 (396)
.+|.+ |+.++.+.
T Consensus 233 ~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 233 AMDLAISKEMDTFH 246 (267)
T ss_dssp EEETTTTEEEEEEC
T ss_pred EEeCCCCCceEEEc
Confidence 99997 57777665
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.49 E-value=0.044 Score=50.60 Aligned_cols=123 Identities=16% Similarity=0.201 Sum_probs=79.2
Q ss_pred CCCCeEEeeCCCCcEEEeecC--CCeEEEEeccCceEEEEecc---------CceEEEEEcC-CeEEEEEecC--CCeee
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSISD---------KHVQEIKISP-GIMLLIFNRS--SSHVP 251 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~--d~~YrVwdlknYs~lysIs~---------~~VqEIkiSp-g~~Ll~~q~~--~~~ip 251 (396)
.+|.-|.+++ +|++....+. ++.++||.+.+.+. ..+.+ ..++.|++++ |.+..+.... ...--
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 7899999997 6888876542 33377887765543 32221 5789999997 5444333221 00235
Q ss_pred eEEEEeecCcEEEEEEee---cccC---CccchhhhhcceeeEee----cCCeeeEEEcccceEEEeccc
Q 016020 252 LKILSIEDGTVLKVFYHL---LHRN---KKVDFIEQFNEKLLVKQ----ENENLQILDVRNAELMEVSRT 311 (396)
Q Consensus 252 lkIl~IetG~~l~s~~~~---L~~s---k~i~FiE~~~ekLLIKQ----ed~~L~I~Dv~~~ki~~v~~t 311 (396)
+.+||..+|+.+..+.+. ..+. ..+.|-. .+..+++-. .+..|.+||+.+++..++...
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~-~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL-IHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET-TTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEec-CCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 788999999988777631 0111 2344433 345777765 467899999999998887654
No 222
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.41 E-value=0.36 Score=45.35 Aligned_cols=175 Identities=11% Similarity=0.057 Sum_probs=117.1
Q ss_pred EEeeCCCCcEEEeecCC--CeEEEEeccCceEEEEecc--Cce-EEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 191 VEFDDVNGKVLTYSAQD--SIYKVFDLKNYTMLYSISD--KHV-QEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d--~~YrVwdlknYs~lysIs~--~~V-qEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
++||+ |....+.... +.++++|+++.+.+-++.- .-+ .-|.+.++.+..+.-.. --+-++|.+|++.+.+
T Consensus 26 L~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~---~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 26 LFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN---HEGFVYDLATLTPRAR 100 (243)
T ss_dssp EEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS---SEEEEEETTTTEEEEE
T ss_pred EEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC---CEEEEEECCcCcEEEE
Confidence 57888 7777777774 6999999999998888763 222 33666666655543332 4577999999999999
Q ss_pred EEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEe-----ecCeEEEEEE-cCeEEEE
Q 016020 266 FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFL-----YENQLFLTFR-NRTVAVW 339 (396)
Q Consensus 266 ~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFl-----y~~qLFLTfs-~gti~iW 339 (396)
+... ....-.- ..+..|++-.....|.++|-.|.+++..-.- ...+..+-++ .++++|.... ++.|.+-
T Consensus 101 i~~~---~~Gwglt-~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V-~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 101 FRYP---GEGWALT-SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV-TAGGRPLDNLNELEWVNGELLANVWLTSRIARI 175 (243)
T ss_dssp EECS---SCCCEEE-ECSSCEEEECSSSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred EeCC---CCceEEe-eCCCEEEEECCCCeEEEEeCCCCeEEEEEEE-ccCCcccccceeeEEeCCEEEEEECCCCeEEEE
Confidence 9842 2222322 2677888888888999999999877763222 2245555554 3899998885 4899999
Q ss_pred eccc-ceeeeecccccc---------CCCCCCCcEEEccCCcEEEE
Q 016020 340 NFRG-ELVTSFEDHLLW---------HPDCNTNNIYITSDQDLIIS 375 (396)
Q Consensus 340 d~~g-eL~t~fedh~l~---------~~~c~~n~~~it~~qd~ii~ 375 (396)
|.+. +.+..++=.-|. ..+.+++.+|...++-|.|-
T Consensus 176 Dp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 176 DPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp CTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 9865 665555533222 22355566666555555554
No 223
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.39 E-value=0.11 Score=49.68 Aligned_cols=182 Identities=12% Similarity=0.136 Sum_probs=111.8
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeec
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIED 259 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~Iet 259 (396)
..+.+|-=+.||..+|++.-.+...+.+..|++.+-.....+.. .....|.+.+ +-.|.+.....+ -+.+++..
T Consensus 113 ~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~--~I~~~~~d- 189 (386)
T 3v65_B 113 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS--RIEVANLD- 189 (386)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTT--EEEECBTT-
T ss_pred cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCC--eEEEEeCC-
Confidence 45778999999998999999999999999999987653333332 3445577763 333334433323 23334443
Q ss_pred CcEEEEEE-eecccCCccchhhhhcceeeEeecC--CeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc-C
Q 016020 260 GTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-R 334 (396)
Q Consensus 260 G~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQed--~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~-g 334 (396)
|+....+. .-|.+-..|.+-+ .+.+|++-..+ ..|..+|+.......+..+....|.+..+.+ ++.||++=+. +
T Consensus 190 g~~~~~l~~~~l~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~ 268 (386)
T 3v65_B 190 GAHRKVLLWQSLEKPRAIALHP-MEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 268 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTT
T ss_pred CCceEEeecCCCCCCcEEEEEc-CCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCC
Confidence 43332221 1111111233222 46677776544 5788888876655555556777899999985 7788988766 8
Q ss_pred eEEEEecccc-eeeeeccccccCCC---CCCCcEEEccC
Q 016020 335 TVAVWNFRGE-LVTSFEDHLLWHPD---CNTNNIYITSD 369 (396)
Q Consensus 335 ti~iWd~~ge-L~t~fedh~l~~~~---c~~n~~~it~~ 369 (396)
.|..+|++|. +.+-+... +.+|+ -.++.+|+|.-
T Consensus 269 ~I~~~d~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 269 VIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDW 306 (386)
T ss_dssp EEEEECTTSCSCEEEECSS-CSSEEEEEEETTEEEEEET
T ss_pred EEEEEeCCCCeeEEEEECC-CCCceEEEEECCEEEEeeC
Confidence 9999999994 33333322 33443 34567777753
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.34 E-value=0.14 Score=49.11 Aligned_cols=175 Identities=7% Similarity=0.040 Sum_probs=114.5
Q ss_pred EEeeCCCCcEEEeecCCCeEEEEeccCceEEEEe-ccCce-EEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 191 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI-SDKHV-QEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysI-s~~~V-qEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
++||+ +....+...++.++++|+++.+.+-++ .+.-+ .-|.+.++.+..+ +...--+-++|.+|++.+.++..
T Consensus 60 L~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~l---tw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 60 LVFHQ--GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQL---TWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEET--TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEE---ESSSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEE---EccCCEEEEEECCcCcEEEEEeC
Confidence 57885 788888888989999999999966665 33323 3377777755433 32335678999999999999984
Q ss_pred ecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEe-----ecCeEEEEEEc-CeEEEEecc
Q 016020 269 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFL-----YENQLFLTFRN-RTVAVWNFR 342 (396)
Q Consensus 269 ~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFl-----y~~qLFLTfs~-gti~iWd~~ 342 (396)
- ..-.-.. ..+..|++-.....|.++|-.|.+++..-.- ...|..+-++ .+++||+.... ++|.+=|.+
T Consensus 135 ~---~eGwGLt-~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V-~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 135 S---GEGWGLC-YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV-KLRGQPVELINELECANGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp S---SCCCCEE-EETTEEEEECSSSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEEEETTEEEEEETTCSEEEEECTT
T ss_pred C---CceeEEe-cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe-CCCCcccccccccEEeCCEEEEEECCCCeEEEEeCC
Confidence 2 2222222 2577787777788999999999887763221 1234443333 28899998854 899999986
Q ss_pred c-ceeeeecccccc---------CCCCCCCcEEEccCCcEEEE
Q 016020 343 G-ELVTSFEDHLLW---------HPDCNTNNIYITSDQDLIIS 375 (396)
Q Consensus 343 g-eL~t~fedh~l~---------~~~c~~n~~~it~~qd~ii~ 375 (396)
. +.+..++=.-|. ..+.+++.+|...++-|.|-
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 5 665555543221 12344555555555555543
No 225
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.32 E-value=0.13 Score=45.26 Aligned_cols=166 Identities=14% Similarity=0.139 Sum_probs=103.1
Q ss_pred CCcEEEeecCCCeEEEEeccCceEEEEe--ccCceEEEEE-cCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccC
Q 016020 197 NGKVLTYSAQDSIYKVFDLKNYTMLYSI--SDKHVQEIKI-SPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN 273 (396)
Q Consensus 197 NgkIlt~~a~d~~YrVwdlknYs~lysI--s~~~VqEIki-Spg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~s 273 (396)
+|.+... ..++.+..||.+ .+.+... ....+..+.+ ++|.+.+.. --+..++ .+|+.+..... + .
T Consensus 147 ~g~l~vg-t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t------~~l~~~d-~~g~~~~~~~~--~-~ 214 (330)
T 3hxj_A 147 DGTIYVG-SNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS------DKVYAIN-PDGTEKWNFYA--G-Y 214 (330)
T ss_dssp TSCEEEE-CTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES------SSEEEEC-TTSCEEEEECC--S-S
T ss_pred CCEEEEE-cCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe------CEEEEEC-CCCcEEEEEcc--C-C
Confidence 5666553 345777778888 6654444 4566777777 456554333 3467788 88888776552 2 2
Q ss_pred Cccchhhhh-cceeeEeecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEcCeEEEEecccceeeeecc-
Q 016020 274 KKVDFIEQF-NEKLLVKQENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFED- 351 (396)
Q Consensus 274 k~i~FiE~~-~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~geL~t~fed- 351 (396)
..+.-+-.. +..|++...++.|..+|-...++.... .....+++.+...++.|++.-.+|.+..+|..|+++..+.-
T Consensus 215 ~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~ 293 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFK-TGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETG 293 (330)
T ss_dssp CCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEE-CSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECS
T ss_pred cceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEee-CCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcC
Confidence 222222223 348999999999999985334444433 33334455555558999998888899999998876665432
Q ss_pred -ccccCCCC-CCCcEEEccCCcEEEE
Q 016020 352 -HLLWHPDC-NTNNIYITSDQDLIIS 375 (396)
Q Consensus 352 -h~l~~~~c-~~n~~~it~~qd~ii~ 375 (396)
.....+-- .++++|+....-++..
T Consensus 294 ~~~~~~~~~d~~g~l~~gt~~G~~~~ 319 (330)
T 3hxj_A 294 SWIIATPVIDENGTIYFGTRNGKFYA 319 (330)
T ss_dssp SCCCSCCEECTTCCEEEECTTSCEEE
T ss_pred CccccceEEcCCCEEEEEcCCCeEEE
Confidence 22222222 6788888877766544
No 226
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.29 E-value=0.15 Score=48.10 Aligned_cols=181 Identities=12% Similarity=0.135 Sum_probs=111.5
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecC
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 260 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG 260 (396)
.+.+|--+.||..++++.-.+...+.+..|++.+......+.. .....|.+.+ +-.|.+.....+ -+.+++.. |
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~--~I~~~~~d-G 147 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS--RIEVANLD-G 147 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT--EEEEEETT-S
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCC--eEEEEcCC-C
Confidence 5678999999998999999999999999999987653333332 3455677763 333334443333 23344443 4
Q ss_pred cEEEEEE-eecccCCccchhhhhcceeeEeecC--CeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc-Ce
Q 016020 261 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-RT 335 (396)
Q Consensus 261 ~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQed--~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~-gt 335 (396)
+....+. ..|.+-..|.+-+ .+.+|++-..+ ..|..+|+.......+..+....|.+..+.+ ++.||++=+. +.
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp-~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHP-MEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEeCCCCCcceEEEec-CcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE
Confidence 4333222 1111112233322 35677766543 5688888766555555556778899999996 7788988766 79
Q ss_pred EEEEecccc-eeeeeccccccCCC---CCCCcEEEccC
Q 016020 336 VAVWNFRGE-LVTSFEDHLLWHPD---CNTNNIYITSD 369 (396)
Q Consensus 336 i~iWd~~ge-L~t~fedh~l~~~~---c~~n~~~it~~ 369 (396)
|..+|.+|. +.+-+... +.+|+ -.++.+|+|.-
T Consensus 227 I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 227 IERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp EEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEET
T ss_pred EEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecC
Confidence 999999994 33333332 33443 34566777653
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.28 E-value=0.55 Score=42.12 Aligned_cols=185 Identities=8% Similarity=0.080 Sum_probs=111.8
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
-..||.=.-+|+..+.++..+..++.+..|+...-...|......+..+.++++=.|++..... --+.+++.. |+..
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~--~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGR--RAITRSDAD-GQAH 119 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTT--TEEEEECTT-SCEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCC--CEEEEECCC-CCEE
Confidence 3456666778873334777788888888999854445666666788899998654455554332 235556654 6543
Q ss_pred EEEEee----cccCCccchhhhhcceeeE-----e-------------ecCCeeeEEEcccceEEEecccccCCCceEEE
Q 016020 264 KVFYHL----LHRNKKVDFIEQFNEKLLV-----K-------------QENENLQILDVRNAELMEVSRTEFMTPSAFIF 321 (396)
Q Consensus 264 ~s~~~~----L~~sk~i~FiE~~~ekLLI-----K-------------Qed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiF 321 (396)
.-.... +.+-..+.+-+ .| .|++ . +....|..||..++++..+. ....|....|
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~-dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVAR-DG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp EEECEETTEECSCCCCEEECT-TS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred EEEeccCCCccCCCCCEEECC-CC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 322110 11112344444 34 4555 2 12357888898888887775 6678899999
Q ss_pred eecCe-EEEEEEc------CeEEEEecccceee---eeccccccCCC----CCCCcEEEccCCcEEEEe
Q 016020 322 LYENQ-LFLTFRN------RTVAVWNFRGELVT---SFEDHLLWHPD----CNTNNIYITSDQDLIISY 376 (396)
Q Consensus 322 ly~~q-LFLTfs~------gti~iWd~~geL~t---~fedh~l~~~~----c~~n~~~it~~qd~ii~~ 376 (396)
.++++ ||++-+. +.|.+||.++.-++ .|.+.....|+ -.++++|++. .+=|..|
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~ 263 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVF 263 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEE
Confidence 99987 7777665 68999998863221 12111122333 3567788877 3434333
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.22 E-value=0.42 Score=45.53 Aligned_cols=154 Identities=10% Similarity=0.084 Sum_probs=102.7
Q ss_pred EEeeCCCCcEEEeecCC--CeEEEEeccCceEEEEecc--CceEE-EEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEE
Q 016020 191 VEFDDVNGKVLTYSAQD--SIYKVFDLKNYTMLYSISD--KHVQE-IKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKV 265 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~d--~~YrVwdlknYs~lysIs~--~~VqE-IkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s 265 (396)
++|++ |....+...+ +.++++|+++.+.+-++.- .-+-| |.+.++.+..+ +...--+-++|.+|++.+.+
T Consensus 48 L~~~~--~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~l---tw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 48 FFYRN--GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGL---TWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEET--TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEE---ESSSSEEEEEETTTCCEEEE
T ss_pred EEEEC--CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEE---EeeCCEEEEEECccCcEEEE
Confidence 47885 6777766664 5999999999998888753 22333 66666655433 32234678999999999999
Q ss_pred EEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEe-cccc---c-CCCceEEEeecCeEEEEEEc-CeEEEE
Q 016020 266 FYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEV-SRTE---F-MTPSAFIFLYENQLFLTFRN-RTVAVW 339 (396)
Q Consensus 266 ~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v-~~t~---~-~~PsAFiFly~~qLFLTfs~-gti~iW 339 (396)
+..- ..-.-.. ..+..|++-.....|.++|-.|.+++.. .-+. . ..+.+.-+. +++||+.... ++|.+-
T Consensus 123 i~~~---~eG~glt-~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vI 197 (262)
T 3nol_A 123 FNYD---GEGWGLT-HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRI 197 (262)
T ss_dssp EECS---SCCCCEE-ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EECC---CCceEEe-cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEE
Confidence 9842 1112222 2566677766677799999999877763 2211 1 222233444 8899998864 899999
Q ss_pred eccc-ceeeeeccccc
Q 016020 340 NFRG-ELVTSFEDHLL 354 (396)
Q Consensus 340 d~~g-eL~t~fedh~l 354 (396)
|.+. +.+..++-.-|
T Consensus 198 Dp~tG~V~~~Id~~~L 213 (262)
T 3nol_A 198 DPETGKVTGIIDLNGI 213 (262)
T ss_dssp CTTTCBEEEEEECTTG
T ss_pred ECCCCcEEEEEECCcC
Confidence 9866 66666665533
No 229
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.11 E-value=0.31 Score=48.34 Aligned_cols=142 Identities=10% Similarity=-0.022 Sum_probs=101.6
Q ss_pred CCcEEEeecC----CCeEEEEeccCceEEEEecc-CceEEEEEcC-CeEEEEEecC-------CCeeeeEEEEeecCcEE
Q 016020 197 NGKVLTYSAQ----DSIYKVFDLKNYTMLYSISD-KHVQEIKISP-GIMLLIFNRS-------SSHVPLKILSIEDGTVL 263 (396)
Q Consensus 197 NgkIlt~~a~----d~~YrVwdlknYs~lysIs~-~~VqEIkiSp-g~~Ll~~q~~-------~~~iplkIl~IetG~~l 263 (396)
..++...+.. ++.+-|.|..+.+.+-+|.- ..-. |.+|| |-.|.+...- ...-.+.+||..|++.+
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~ 122 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT 122 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE
Confidence 4667777665 78999999999999999985 4445 99996 4455555421 11346899999999999
Q ss_pred EEEEeec-------ccCCccchhhhhcceeeEeec--CCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-
Q 016020 264 KVFYHLL-------HRNKKVDFIEQFNEKLLVKQE--NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN- 333 (396)
Q Consensus 264 ~s~~~~L-------~~sk~i~FiE~~~ekLLIKQe--d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~- 333 (396)
.++...- .+-..+.|.+ +|.+|++-.. +..+.++|+.+++.+..-+... ..-++-.....|++++.
T Consensus 123 ~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g---~~~~~P~g~~~~~~~~~D 198 (386)
T 3sjl_D 123 ADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD---CYHIFPTAPDTFFMHCRD 198 (386)
T ss_dssp EEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---EEEEEEEETTEEEEEETT
T ss_pred EEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC---cceeecCCCceeEEECCC
Confidence 9876321 0122377777 9999999975 5789999999999887543321 13444445566777766
Q ss_pred CeEEEEeccc
Q 016020 334 RTVAVWNFRG 343 (396)
Q Consensus 334 gti~iWd~~g 343 (396)
|++.+.+...
T Consensus 199 G~~~~v~~~~ 208 (386)
T 3sjl_D 199 GSLAKVAFGT 208 (386)
T ss_dssp SCEEEEECCS
T ss_pred CCEEEEECCC
Confidence 8888888864
No 230
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.09 E-value=0.4 Score=43.01 Aligned_cols=179 Identities=7% Similarity=0.052 Sum_probs=107.4
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEE
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVL 263 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l 263 (396)
...+|.=.-+|+.++.++..+..++.+..||..+.+...--....+..|.++++=.|++... --+.+++.++|+..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~~----~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATIG----TKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEET----TEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEEC----CeEEEEECCCCcEE
Confidence 34456666778878889988888899999999887643222347889999986544555542 14678888888754
Q ss_pred EEEEee----cccCCccchhhhhcceeeEeec----------CCeeeEEEccc-ceEEEecccccCCCceEEEeecCe-E
Q 016020 264 KVFYHL----LHRNKKVDFIEQFNEKLLVKQE----------NENLQILDVRN-AELMEVSRTEFMTPSAFIFLYENQ-L 327 (396)
Q Consensus 264 ~s~~~~----L~~sk~i~FiE~~~ekLLIKQe----------d~~L~I~Dv~~-~ki~~v~~t~~~~PsAFiFly~~q-L 327 (396)
.-.... ..+-..+.+-+ .|. |++..- ...-.||-+.. +++..+ ......|....|.++++ |
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~-dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~-~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDP-AGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY-FDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECT-TSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE-EEEESBEEEEEECTTSCEE
T ss_pred EEEecCCCCCCCCCCCEEECC-CCC-EEEecCCcccccccccCCCcEEEEEECCCCEEEE-eeccccccceEEcCCCCEE
Confidence 432211 01112244444 444 666431 12335555543 444443 34556788999999886 6
Q ss_pred EEEEEc-CeEEEEecc---cce-----eeeeccccccCCC----CCCCcEEEccCC
Q 016020 328 FLTFRN-RTVAVWNFR---GEL-----VTSFEDHLLWHPD----CNTNNIYITSDQ 370 (396)
Q Consensus 328 FLTfs~-gti~iWd~~---geL-----~t~fedh~l~~~~----c~~n~~~it~~q 370 (396)
|++-+. +.|.+||++ |.+ ...+.++. -.|+ -+++++|++...
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~-~~p~g~~~d~~G~lwva~~~ 218 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEE-QIPDGMCIDAEGKLWVACYN 218 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGG-CEEEEEEEBTTSCEEEEEET
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCC-CCCCeeEECCCCCEEEEEcC
Confidence 777665 899999974 333 22333221 1222 256788887643
No 231
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.02 E-value=0.3 Score=47.77 Aligned_cols=161 Identities=9% Similarity=0.048 Sum_probs=104.5
Q ss_pred eecccCCCCeEEeeC-CCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCC-eEEEEEecCCCeee-eEEEE
Q 016020 181 ESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPG-IMLLIFNRSSSHVP-LKILS 256 (396)
Q Consensus 181 ~~~~l~~PgfVEFDd-~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg-~~Ll~~q~~~~~ip-lkIl~ 256 (396)
+...+.+|.++-+|+ -.|.+...+.. +.++++|+.+.+...-+.. ..-..|.+++. -.|++.....+.+. ..++-
T Consensus 132 ~~~~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 132 DCGGFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp GCBCCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred HccCCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 344688999999996 37888777766 8899999988664333333 66888999864 44666665333221 12222
Q ss_pred eecCcEE--EEEEeecccCCccchhhhhcceeeE-eecCCeeeEEEcccceEEEe-cccccCCCceEEEeecCe-EEEEE
Q 016020 257 IEDGTVL--KVFYHLLHRNKKVDFIEQFNEKLLV-KQENENLQILDVRNAELMEV-SRTEFMTPSAFIFLYENQ-LFLTF 331 (396)
Q Consensus 257 IetG~~l--~s~~~~L~~sk~i~FiE~~~ekLLI-KQed~~L~I~Dv~~~ki~~v-~~t~~~~PsAFiFly~~q-LFLTf 331 (396)
..+|+.. ..+. .+.+-..+.+-+. +.+|++ -..+..|..+|..+++...+ .......|....|.++++ ||++-
T Consensus 211 ~~~g~~~~~~~l~-~~~~p~giavdp~-~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 211 TRESGFKVITELT-KGQNCNGAETHPI-NGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp EGGGTSCSEEEEE-ECSSCCCEEECTT-TCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred eCCCceeeeeeec-cCCCceEEEEeCC-CCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 2344333 1222 1233344555442 455665 45778899999988876333 222335799999999998 88887
Q ss_pred Ec-CeEEEEecccc
Q 016020 332 RN-RTVAVWNFRGE 344 (396)
Q Consensus 332 s~-gti~iWd~~ge 344 (396)
.. +.|..++.+|+
T Consensus 289 ~~~~~I~~~~~d~~ 302 (430)
T 3tc9_A 289 VNQHYILRSDYDWK 302 (430)
T ss_dssp TTTTEEEEEEEETT
T ss_pred CCCCEEEEEeCCcc
Confidence 66 89999998863
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.87 E-value=0.099 Score=53.48 Aligned_cols=150 Identities=13% Similarity=0.117 Sum_probs=89.2
Q ss_pred EEeeCCCCcEEEeecC-----CCeEEEEeccCceEEE-EeccCceEEEEEcCCeEEEEEecCCC--------eee--eEE
Q 016020 191 VEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLY-SISDKHVQEIKISPGIMLLIFNRSSS--------HVP--LKI 254 (396)
Q Consensus 191 VEFDd~NgkIlt~~a~-----d~~YrVwdlknYs~ly-sIs~~~VqEIkiSpg~~Ll~~q~~~~--------~ip--lkI 254 (396)
+.|.+ +|+.+||... +..++|||+.+.+.+- .+.+.....+.||+|-.|+....... ..| +.+
T Consensus 134 ~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 134 LSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCcEEEE
Confidence 46777 8999998654 2578999999998543 23322236778886655544443321 223 666
Q ss_pred EEeecCcEEEEEEeeccc---C--CccchhhhhcceeeEeec----CCeeeEEEcccc--eEEEecccccCCCceEEEee
Q 016020 255 LSIEDGTVLKVFYHLLHR---N--KKVDFIEQFNEKLLVKQE----NENLQILDVRNA--ELMEVSRTEFMTPSAFIFLY 323 (396)
Q Consensus 255 l~IetG~~l~s~~~~L~~---s--k~i~FiE~~~ekLLIKQe----d~~L~I~Dv~~~--ki~~v~~t~~~~PsAFiFly 323 (396)
+++.+++....+.+-... . -.+.|.+ .+++|++... ...|.++|+.++ +...+.... ..-...+..+
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~ 290 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL-DADVSLVDNK 290 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS-SSCEEEEEEE
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC-CceEEEEecc
Confidence 777776542222211111 1 1256666 8999987653 247899999876 555553332 2223334455
Q ss_pred cCeEEEEEEc----CeEEEEeccc
Q 016020 324 ENQLFLTFRN----RTVAVWNFRG 343 (396)
Q Consensus 324 ~~qLFLTfs~----gti~iWd~~g 343 (396)
+++++++-.. +.|-.||+++
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTS
T ss_pred CCEEEEEECCCCCCCEEEEEeCCC
Confidence 5666555432 5788888876
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.84 E-value=1.7 Score=43.39 Aligned_cols=235 Identities=9% Similarity=-0.003 Sum_probs=132.7
Q ss_pred ccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC-----Ccceee
Q 016020 108 GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG-----FALFES 182 (396)
Q Consensus 108 G~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~-----~~LF~~ 182 (396)
|.-.++|..|++.+-.|-....= -|-++.....|.+.+.+.+....+=.-..+..=+...++.-.. .+-|.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P---gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~- 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP---HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL- 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC-
T ss_pred CeEEEEECCCCEEEEEEECCCCC---ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc-
Confidence 67889999999999888766543 4778888877777654322100000001111112222221000 00111
Q ss_pred cccCCCCeEEeeCCCCcEEEeecC-CCeEEEEeccCceEEEEeccCce---E------EEEEc-CCeEEEEEecCCCee-
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSISDKHV---Q------EIKIS-PGIMLLIFNRSSSHV- 250 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~-d~~YrVwdlknYs~lysIs~~~V---q------EIkiS-pg~~Ll~~q~~~~~i- 250 (396)
....|.-+-|++-..++...+.. ++.+-|.|+++.+.+-+|.-... . -+.++ +|.++.+........
T Consensus 175 -~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~ 253 (426)
T 3c75_H 175 -VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKV 253 (426)
T ss_dssp -BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEE
T ss_pred -cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEE
Confidence 13579999999855555555543 68899999999999888874221 1 02233 344444444211111
Q ss_pred ---------------------------------eeEEEEeecCcEEE--EEEee---------cc-cCCccchhhhhcce
Q 016020 251 ---------------------------------PLKILSIEDGTVLK--VFYHL---------LH-RNKKVDFIEQFNEK 285 (396)
Q Consensus 251 ---------------------------------plkIl~IetG~~l~--s~~~~---------L~-~sk~i~FiE~~~ek 285 (396)
-+.++|..+++... .+... .+ ....+.|.+ .+.+
T Consensus 254 ~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~-dg~r 332 (426)
T 3c75_H 254 TNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR-QSDR 332 (426)
T ss_dssp EECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG-GGTE
T ss_pred EeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC-CCCE
Confidence 12223332222111 01100 00 001144444 6678
Q ss_pred eeEeec----------CCeeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEEE--cCeEEEEeccc-ceeeee
Q 016020 286 LLVKQE----------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR--NRTVAVWNFRG-ELVTSF 349 (396)
Q Consensus 286 LLIKQe----------d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs--~gti~iWd~~g-eL~t~f 349 (396)
|++--. +..+.++|..+.+.+..-+... .|....|.++++ ++++.. +++|.++|... +.+.++
T Consensus 333 lyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 333 IYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 888632 3579999999999887544332 699999999998 666666 59999999987 677776
No 234
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.83 E-value=0.77 Score=44.30 Aligned_cols=194 Identities=9% Similarity=0.071 Sum_probs=116.0
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCc----eEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEE
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknY----s~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~ 256 (396)
.+..|-=+.||..++++--.+...+.+..+++.+. ...-.+.. .....|.+.+ +-.|.+....... +.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~--I~~~~ 187 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT--VSVAD 187 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE--EEEEC
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCe--EEEEe
Confidence 47789999999999999999999999999999762 22222332 5667788874 4444455544333 34566
Q ss_pred eecCcEEEEEEeecccCCccchhhhhcceeeEeecC--CeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc
Q 016020 257 IEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN 333 (396)
Q Consensus 257 IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed--~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~ 333 (396)
...+.....+...|..-..|.+-+ .+.+|++---+ ..|...|+.......+..+...+|.+..+.+ ++.||++=+.
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp-~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEET-TTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEeCCCCCcceEEEec-ccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC
Confidence 544333322321122112233322 46778776633 5788888876665555566778999999985 6778888655
Q ss_pred -CeEEEEecccc-eeeeecc-ccccCCC---CCCCcEEEccCC-cEEEEeccCC
Q 016020 334 -RTVAVWNFRGE-LVTSFED-HLLWHPD---CNTNNIYITSDQ-DLIISYCKAE 380 (396)
Q Consensus 334 -gti~iWd~~ge-L~t~fed-h~l~~~~---c~~n~~~it~~q-d~ii~~~~~~ 380 (396)
+.|...|++|. +.+-.+. ..+.+|. -..+.+|+|... .-|..+-|..
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 267 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSS
T ss_pred CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCC
Confidence 79999999994 3332222 1233333 234556666422 3344444433
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.75 E-value=0.041 Score=53.75 Aligned_cols=122 Identities=5% Similarity=-0.195 Sum_probs=84.3
Q ss_pred EEEEecCCCee--eeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee----------cCCeeeEEEcccceEEE
Q 016020 240 LLIFNRSSSHV--PLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ----------ENENLQILDVRNAELME 307 (396)
Q Consensus 240 Ll~~q~~~~~i--plkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ----------ed~~L~I~Dv~~~ki~~ 307 (396)
+.+..+..+.+ -+.++|..+++.+..+..- ..--+.|.+ ++.+|++.. .+..|.+||..+++.+.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG--~~P~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGA--FLSLAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEEC--TTCEEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCC--CCCceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 44445544433 6889999999999988733 222588888 999999996 47889999999999887
Q ss_pred ecccc-------cCCCceEEEeecCeEEEEEE---cCeEEE--Eeccc--cee------eeeccccccCCCCCCCcE
Q 016020 308 VSRTE-------FMTPSAFIFLYENQLFLTFR---NRTVAV--WNFRG--ELV------TSFEDHLLWHPDCNTNNI 364 (396)
Q Consensus 308 v~~t~-------~~~PsAFiFly~~qLFLTfs---~gti~i--Wd~~g--eL~------t~fedh~l~~~~c~~n~~ 364 (396)
.-+.. ...|..+.|.++++..++.. ++.+.+ ||... ++- ..-+++.+|..+|+++++
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 53322 25799999999986544443 368888 99965 111 123344455566666653
No 236
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.73 E-value=0.59 Score=42.82 Aligned_cols=147 Identities=9% Similarity=0.041 Sum_probs=91.5
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEE-EEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEE
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~l-ysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~ 264 (396)
.+|.-.-||+.++.++..+..++.+.+||..+.+.. +.. +..+..|.++|+--+++.... -+.+|+.++|+...
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~~~v~~i~~~~dg~l~v~~~~----gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL-PFMGSALAKISDSKQLIASDD----GLFLRDTATGVLTL 123 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC-SSCEEEEEEEETTEEEEEETT----EEEEEETTTCCEEE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC-CCcceEEEEeCCCeEEEEECC----CEEEEECCCCcEEE
Confidence 344556688877888888888888999999887632 333 468999999855444454422 27888988888543
Q ss_pred EEEee--c--ccCCccchhhhhcceeeEeecC-------CeeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEEE
Q 016020 265 VFYHL--L--HRNKKVDFIEQFNEKLLVKQEN-------ENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR 332 (396)
Q Consensus 265 s~~~~--L--~~sk~i~FiE~~~ekLLIKQed-------~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs 332 (396)
-.... . .+-..+.+-+ .| .|++...+ ..|-.+| ++++..+. .....|....|.++++ ||++-+
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~-~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~-~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHP-SG-ALWIGTMGRKAETGAGSIYHVA--KGKVTKLF-ADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EECSSTTCTTEEEEEEEECT-TS-CEEEEEEETTCCTTCEEEEEEE--TTEEEEEE-EEESSEEEEEECTTSCEEEEEET
T ss_pred EeeCCCCCCCCCCCCEEECC-CC-CEEEEeCCCcCCCCceEEEEEe--CCcEEEee-CCCcccCCeEEcCCCCEEEEEEC
Confidence 22110 0 0011234443 34 46665432 3455555 67766543 3345678888998886 666654
Q ss_pred c-CeEEEEecc
Q 016020 333 N-RTVAVWNFR 342 (396)
Q Consensus 333 ~-gti~iWd~~ 342 (396)
. +.|.+||.+
T Consensus 199 ~~~~I~~~d~~ 209 (326)
T 2ghs_A 199 KVNRLMRVPLD 209 (326)
T ss_dssp TTCEEEEEEBC
T ss_pred CCCEEEEEEcc
Confidence 4 799999985
No 237
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=95.72 E-value=0.16 Score=50.33 Aligned_cols=131 Identities=22% Similarity=0.277 Sum_probs=93.2
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCceE---EEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEE
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~---lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~ 264 (396)
+-.+-| +|.+|+.. .++.++|||+..... ++.++ ..+.+++..+..++++ . +...|.+|++.+|....
T Consensus 90 V~~l~f---d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~-~~v~~i~~~~p~~av~-~---~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 90 VIFVCF---HGDQVLVS-TRNALYSLDLEELSEFRTVTSFE-KPVFQLKNVNNTLVIL-N---SVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp EEEEEE---ETTEEEEE-ESSEEEEEESSSTTCEEEEEECS-SCEEEEEECSSEEEEE-E---TTSEEEEEETTTCCEEE
T ss_pred eeEEEE---CCCEEEEE-cCCcEEEEEchhhhccCccceee-cceeeEEecCCCEEEE-E---CCCCEEEEEccCCcccc
Confidence 345567 47888877 889999999876654 33333 5688999887753333 2 34688899999988653
Q ss_pred EEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceE--E-Eecc--------cccCCCceEEEeecCeEEEEEEc
Q 016020 265 VFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAEL--M-EVSR--------TEFMTPSAFIFLYENQLFLTFRN 333 (396)
Q Consensus 265 s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki--~-~v~~--------t~~~~PsAFiFly~~qLFLTfs~ 333 (396)
+. ..=.-+++.+ .| +.+.-.|+.+++|+..++++ . ++++ .+...+.+..++.+.+.++++..
T Consensus 161 -~~---~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 161 -LA---QNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp -EE---ESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred -cc---CCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 11 2223366666 45 67777889999999999885 3 3422 25788999999999999999887
Q ss_pred C
Q 016020 334 R 334 (396)
Q Consensus 334 g 334 (396)
.
T Consensus 234 ~ 234 (388)
T 1xip_A 234 V 234 (388)
T ss_dssp C
T ss_pred C
Confidence 3
No 238
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.70 E-value=0.94 Score=46.07 Aligned_cols=84 Identities=6% Similarity=0.010 Sum_probs=57.3
Q ss_pred eeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccc-cCCCceEEEeecCeEE
Q 016020 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE-FMTPSAFIFLYENQLF 328 (396)
Q Consensus 250 iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~-~~~PsAFiFly~~qLF 328 (396)
-.|..||..||+.+-++...-+. .-.-. -.-+..+++...+..|.+||..++|++-..++. ...-+..++..++.+|
T Consensus 444 g~l~a~D~~tG~~~W~~~~~~~~-~~~~~-~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~y 521 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEKFAA-WGGTL-YTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQY 521 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC-CSBCE-EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CeEEEEECCCCCEEEEecCCCCc-cceeE-EECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEE
Confidence 56888999999998887632111 00111 124788999999999999999999988533322 1222334567899999
Q ss_pred EEEEcCe
Q 016020 329 LTFRNRT 335 (396)
Q Consensus 329 LTfs~gt 335 (396)
+...+|.
T Consensus 522 v~~~~G~ 528 (571)
T 2ad6_A 522 IGSMYGV 528 (571)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9998864
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.56 E-value=1.5 Score=45.40 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=46.3
Q ss_pred CeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEcCeEEEEecc-cceeeeecccc-cc-CCCC--CCCcEEE
Q 016020 293 ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRNRTVAVWNFR-GELVTSFEDHL-LW-HPDC--NTNNIYI 366 (396)
Q Consensus 293 ~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~gti~iWd~~-geL~t~fedh~-l~-~~~c--~~n~~~i 366 (396)
+.|..||+.|+|+.-.-+.. .++..-.+.. ++-+|+.-.+|.+.+||.. |+++-+|.-.- .+ .|-. .+++.|+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 67999999999987644333 2233333444 4455666556999999986 68777775221 11 1222 5677776
Q ss_pred c
Q 016020 367 T 367 (396)
Q Consensus 367 t 367 (396)
.
T Consensus 536 ~ 536 (677)
T 1kb0_A 536 S 536 (677)
T ss_dssp E
T ss_pred E
Confidence 4
No 240
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.50 E-value=0.33 Score=48.54 Aligned_cols=139 Identities=10% Similarity=-0.031 Sum_probs=94.5
Q ss_pred CcEEEeecCC----CeEEEEeccCceEEEEecc-CceEEEEEcCC-eEEEEEecC-------CCeeeeEEEEeecCcEEE
Q 016020 198 GKVLTYSAQD----SIYKVFDLKNYTMLYSISD-KHVQEIKISPG-IMLLIFNRS-------SSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 198 gkIlt~~a~d----~~YrVwdlknYs~lysIs~-~~VqEIkiSpg-~~Ll~~q~~-------~~~iplkIl~IetG~~l~ 264 (396)
.++...+..+ +.+-|.|+.+.+.+-+|.- ..= .|.+||+ -.|++.... ...-.+.++|..+++.++
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 4555655544 7999999999999999985 444 8999964 455555531 123478999999999999
Q ss_pred EEEee-cc------cCCccchhhhhcceeeEeec--CCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-C
Q 016020 265 VFYHL-LH------RNKKVDFIEQFNEKLLVKQE--NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-R 334 (396)
Q Consensus 265 s~~~~-L~------~sk~i~FiE~~~ekLLIKQe--d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-g 334 (396)
.+... .. .-..+.|.+ .+.+|++-.+ +..+.++|+.+++++..-+... ...++-..+..|++++. |
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g---~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD---CYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---EEEEEEEETTEEEEEETTS
T ss_pred EEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC---ceeeccCCCcEEEEEcCCC
Confidence 87732 01 112367776 8999999875 5789999999999887433321 12333334466666665 6
Q ss_pred eEEEEec
Q 016020 335 TVAVWNF 341 (396)
Q Consensus 335 ti~iWd~ 341 (396)
++.+.+.
T Consensus 240 ~~~~V~~ 246 (426)
T 3c75_H 240 SLARVDF 246 (426)
T ss_dssp SEEEEEC
T ss_pred CEEEEEC
Confidence 6665555
No 241
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.48 E-value=1.4 Score=45.68 Aligned_cols=81 Identities=7% Similarity=0.026 Sum_probs=57.6
Q ss_pred eeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEE---ecccccCCCceEEEeecCe
Q 016020 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME---VSRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 250 iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~---v~~t~~~~PsAFiFly~~q 326 (396)
.-|.-||+.||+.+-+.....+...- -+-.-+..+++...|..|++||..|+|++- ++.....+|.. +..+++
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~~~~g--~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~--y~~~G~ 528 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFAVWGG--TMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMT--YTHKGT 528 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSB--CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTE
T ss_pred CeEEEEECCCCCEEeEecCCCCccCc--ceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEE--EEeCCE
Confidence 45888899999998877642211110 012257888999999999999999999875 44445556644 467899
Q ss_pred EEEEEEcC
Q 016020 327 LFLTFRNR 334 (396)
Q Consensus 327 LFLTfs~g 334 (396)
.|+.+.+|
T Consensus 529 qyv~~~~G 536 (599)
T 1w6s_A 529 QYVAIYYG 536 (599)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcc
Confidence 99998886
No 242
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.46 E-value=0.0075 Score=57.17 Aligned_cols=189 Identities=13% Similarity=0.142 Sum_probs=92.0
Q ss_pred ccchhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC
Q 016020 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSG 176 (396)
Q Consensus 97 a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~ 176 (396)
..+.|++-+..|.-.|+|..||+.+=.+.. +++..+-+... +.++++. +.+ ..|.|-- ..-|+.--.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~--g~~~v~~---s~d-g~l~a~d-----~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVE--EPAFLPD---PND-GSLYTLG-----SKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-------CCEEEC---TTT-CCEEEC----------CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcC--CCEEEEe---CCC-CEEEEEE-----CCCCceeee
Confidence 567788888889999999999999887766 45554444432 3344421 222 2333321 112221000
Q ss_pred Ccceeec--ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEE
Q 016020 177 FALFESE--SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKI 254 (396)
Q Consensus 177 ~~LF~~~--~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkI 254 (396)
. -+... .-..|-.. + +|++++ ...++.+..||.++.+.+.++.... .+..+|.--.++.... ...+..
T Consensus 75 ~-~~~~~~~~~~sp~~~--~--~~~v~~-g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~--dg~v~a 144 (369)
T 2hz6_A 75 L-PFTIPELVQASPCRS--S--DGILYM-GKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRT--EYTITM 144 (369)
T ss_dssp C-SCCHHHHHTTCSCC---------CCC-CEEEEEEEEECCC------------------------EEEEEE--EEEEEC
T ss_pred e-eccCccccccCceEe--c--CCEEEE-EeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEec--CCEEEE
Confidence 0 01111 11234321 1 344443 4567889999999999988887643 2345542222222222 457899
Q ss_pred EEeecCcEEEEEEeecccCCccchhh--hhcceeeEeecCCeeeEEEcccceEEEecc
Q 016020 255 LSIEDGTVLKVFYHLLHRNKKVDFIE--QFNEKLLVKQENENLQILDVRNAELMEVSR 310 (396)
Q Consensus 255 l~IetG~~l~s~~~~L~~sk~i~FiE--~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~ 310 (396)
||..||+.+-.+..- ....+.+.. ..+..+++...++.|.+||..+++++-..+
T Consensus 145 ~d~~tG~~~W~~~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 145 YDTKTRELRWNATYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CCSSSSSCCCEEEEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEEeEecc--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 999999988776521 111222211 122678999999999999999999876433
No 243
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.36 E-value=1.3 Score=40.80 Aligned_cols=182 Identities=9% Similarity=0.093 Sum_probs=108.2
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccC----ceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEE
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlkn----Ys~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~ 256 (396)
.+..|-=+.||..++++.-.+...+.+.++|+.+ -.....+.. .....|.+.+ +-.|.+.....+. +.+++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~--I~~~~ 105 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT--VSVAD 105 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE--EEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCE--EEEEe
Confidence 4678999999998999999999999999999986 222222332 4667788863 4444455444333 34556
Q ss_pred eecCcEEEEEEe-ecccCCccchhhhhcceeeEeecC--CeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEE
Q 016020 257 IEDGTVLKVFYH-LLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR 332 (396)
Q Consensus 257 IetG~~l~s~~~-~L~~sk~i~FiE~~~ekLLIKQed--~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs 332 (396)
.. |+....+.. .+.+-..+.+-+ .+.+|++-..+ ..|..+|+.-.....+..+....|....+.+ ++.||++=+
T Consensus 106 ~~-g~~~~~~~~~~~~~P~~iavdp-~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 106 TK-GVKRKTLFRENGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp TT-SSSEEEEEECTTCCEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CC-CCceEEEEECCCCCcceEEeCC-CCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 54 444333321 112212233222 46677776654 4677788754444334445678899999986 577888876
Q ss_pred c-CeEEEEecccc-eeeeecc-ccccCCC---CCCCcEEEccC
Q 016020 333 N-RTVAVWNFRGE-LVTSFED-HLLWHPD---CNTNNIYITSD 369 (396)
Q Consensus 333 ~-gti~iWd~~ge-L~t~fed-h~l~~~~---c~~n~~~it~~ 369 (396)
. +.|...|++|. +.+-.+. ..+.+|+ -..+.+|+|.-
T Consensus 184 ~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~ 226 (316)
T 1ijq_A 184 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 226 (316)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET
T ss_pred CCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEEC
Confidence 6 79999999994 3222221 1233333 23466777653
No 244
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.33 E-value=0.15 Score=50.57 Aligned_cols=151 Identities=13% Similarity=0.156 Sum_probs=96.0
Q ss_pred CCCeEEeeCCCCcEE-Eeec---------CCCeEEEEeccCceEEEEecc---------CceEEEEEcC-CeEEEEEecC
Q 016020 187 WPGFVEFDDVNGKVL-TYSA---------QDSIYKVFDLKNYTMLYSISD---------KHVQEIKISP-GIMLLIFNRS 246 (396)
Q Consensus 187 ~PgfVEFDd~NgkIl-t~~a---------~d~~YrVwdlknYs~lysIs~---------~~VqEIkiSp-g~~Ll~~q~~ 246 (396)
.|+ +-+++ .|+.+ ..+. .++.+.|||.++.+.+-+|.- ..-..+.+|| |-.|++.+..
T Consensus 80 ~P~-va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~ 157 (386)
T 3sjl_D 80 LPN-PVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 157 (386)
T ss_dssp SCE-EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred CCc-EEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC
Confidence 377 89998 55543 4442 367899999999999988852 3566799994 6677777642
Q ss_pred CCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEccc-ceEEEecccccCCCceEEE----
Q 016020 247 SSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-AELMEVSRTEFMTPSAFIF---- 321 (396)
Q Consensus 247 ~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~-~ki~~v~~t~~~~PsAFiF---- 321 (396)
. .-.+.++|+++++.+..+.. + ....-| +.-...++.-..|+.+...|+.+ +++.......++.-...+|
T Consensus 158 ~-~~~VsVID~~t~~vv~tI~v--~-g~~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~ 232 (386)
T 3sjl_D 158 P-APAVGVVDLEGKAFKRMLDV--P-DCYHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 232 (386)
T ss_dssp S-SCEEEEEETTTTEEEEEEEC--C-SEEEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred C-CCeEEEEECCCCcEEEEEEC--C-Ccceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccce
Confidence 1 23577899999999998862 1 111111 21233444556778888889887 6664322223332223343
Q ss_pred -e-ecCeEEEEEEcCeEEEEecccc
Q 016020 322 -L-YENQLFLTFRNRTVAVWNFRGE 344 (396)
Q Consensus 322 -l-y~~qLFLTfs~gti~iWd~~ge 344 (396)
. .++.+++.-.+|++.+.|+.++
T Consensus 233 ~~~~dG~~~~vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 233 YSQKAGRLVWPTYTGKIHQIDLSSG 257 (386)
T ss_dssp EETTTTEEEEEBTTSEEEEEECTTS
T ss_pred eEcCCCcEEEEeCCCEEEEEECCCC
Confidence 2 4676544333699999999885
No 245
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.24 E-value=2.8 Score=42.84 Aligned_cols=199 Identities=13% Similarity=0.166 Sum_probs=110.1
Q ss_pred eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc-ceeecccCCCCeEEeeCCCCcEEEeecCCCe
Q 016020 131 VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFA-LFESESLKWPGFVEFDDVNGKVLTYSAQDSI 209 (396)
Q Consensus 131 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~-LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~ 209 (396)
.+.++-...+...|.+++-....+-..|.- -++.-|+. .+ .++......| .|. .|+-++|...+..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v-----~dl~tg~~---~~~~~~~~k~~~~---~Ws--Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHL-----MDVESKQP---LETPLKDVKFSGI---SWL--GNEGFFYSSYDKP 196 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEE-----EETTTCSE---EEEEEEEEESCCC---EEE--TTTEEEEEESSCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEE-----EECCCCCC---CccccCCceeccE---EEe--CCCEEEEEEecCc
Confidence 566666777666666544333332222222 23333332 11 1222222333 455 3677888877743
Q ss_pred -------------EEEEeccCce----EEEEecc---CceEEEEEcCCe-EEEEEecCC-CeeeeEEEEeecCc-EEEEE
Q 016020 210 -------------YKVFDLKNYT----MLYSISD---KHVQEIKISPGI-MLLIFNRSS-SHVPLKILSIEDGT-VLKVF 266 (396)
Q Consensus 210 -------------YrVwdlknYs----~lysIs~---~~VqEIkiSpg~-~Ll~~q~~~-~~iplkIl~IetG~-~l~s~ 266 (396)
+++|++.+-. ++|+-.+ ..+..+.+||+- .|++..... ..--+.++++.+|+ ....+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l 276 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV 276 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE
Confidence 7778886643 7888765 236789999654 444443332 22467788998875 34433
Q ss_pred EeecccCCccchhhhhcceeeEeec----CCeeeEEEcccceE---EEecccccCCCceEEEeecCe-EEEEEEcC---e
Q 016020 267 YHLLHRNKKVDFIEQFNEKLLVKQE----NENLQILDVRNAEL---MEVSRTEFMTPSAFIFLYENQ-LFLTFRNR---T 335 (396)
Q Consensus 267 ~~~L~~sk~i~FiE~~~ekLLIKQe----d~~L~I~Dv~~~ki---~~v~~t~~~~PsAFiFly~~q-LFLTfs~g---t 335 (396)
. -+...........+++|++... +..|-.+|+.+++. ..+.+... ... -|.++++ |+++...+ .
T Consensus 277 ~--~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~--~~s~~g~~lv~~~~~~g~~~ 351 (693)
T 3iuj_A 277 Q--GDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ-QVL--TVHSGSGYLFAEYMVDATAR 351 (693)
T ss_dssp E--CSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCE--EEEEETTEEEEEEEETTEEE
T ss_pred e--CCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC-CEE--EEEEECCEEEEEEEECCeeE
Confidence 3 1222222334457888887763 35788899988654 44333322 222 5666554 55555553 7
Q ss_pred EEEEecccceee
Q 016020 336 VAVWNFRGELVT 347 (396)
Q Consensus 336 i~iWd~~geL~t 347 (396)
|.+||++|....
T Consensus 352 l~~~d~~g~~~~ 363 (693)
T 3iuj_A 352 VEQFDYEGKRVR 363 (693)
T ss_dssp EEEECTTSCEEE
T ss_pred EEEEECCCCeeE
Confidence 899999985333
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.10 E-value=2.7 Score=40.91 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=57.0
Q ss_pred cchhhhhcceeeEeec---------CCeeeEEEcccceEEEecccccCCCceEEEeecCe-EEEEEE--cCeEEEEeccc
Q 016020 276 VDFIEQFNEKLLVKQE---------NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFR--NRTVAVWNFRG 343 (396)
Q Consensus 276 i~FiE~~~ekLLIKQe---------d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs--~gti~iWd~~g 343 (396)
+.|.+ .+..|++--. ++...++|+.+++.+...+... .|..+.|.++++ ||++-. +++|.++|+..
T Consensus 269 v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 34444 6788888533 2567799999999888555443 699999999986 899998 59999999988
Q ss_pred -ceeeeec
Q 016020 344 -ELVTSFE 350 (396)
Q Consensus 344 -eL~t~fe 350 (396)
+.+.++.
T Consensus 347 ~kvv~~I~ 354 (368)
T 1mda_H 347 DQDQSSVE 354 (368)
T ss_dssp CEEEEECC
T ss_pred CcEEEEEE
Confidence 6777776
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.85 E-value=0.53 Score=44.37 Aligned_cols=147 Identities=11% Similarity=0.072 Sum_probs=93.9
Q ss_pred ceEEEEeccC---ceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee-cCC
Q 016020 218 YTMLYSISDK---HVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENE 293 (396)
Q Consensus 218 Ys~lysIs~~---~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ-ed~ 293 (396)
|+-+=+|... ..|-+.++|+-.|.+..+....-.+..+|.+||+.+.++. |+.....+=+-..+..|++-. .++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~--l~~~~fgeGi~~~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK--MDDSYFGEGLTLLNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE--CCTTCCEEEEEEETTEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe--cCCCcceEEEEEeCCEEEEEEecCC
Confidence 4444445442 2588999983366666554344579999999999999876 233222111222467787776 567
Q ss_pred eeeEEEcccceEEEecccccCCCceEEEeec-CeEEEEEEcCeEEEEeccc-ceeeeec--c--c---cccCCCCCCCcE
Q 016020 294 NLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFRNRTVAVWNFRG-ELVTSFE--D--H---LLWHPDCNTNNI 364 (396)
Q Consensus 294 ~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~-~qLFLTfs~gti~iWd~~g-eL~t~fe--d--h---~l~~~~c~~n~~ 364 (396)
.+-++|..+.+.+..-+.. .|...-..++ +.||++=-++++.+.|.+. +.+.+++ + + .++...+.++.+
T Consensus 87 ~v~viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~l 164 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEV 164 (266)
T ss_dssp EEEEEETTTTEEEEEEECC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEE
T ss_pred EEEEEECCCCcEEEEEECC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEE
Confidence 8999999999888754333 3555555555 5577665448999999988 5444443 1 1 244444667788
Q ss_pred EEcc
Q 016020 365 YITS 368 (396)
Q Consensus 365 ~it~ 368 (396)
|++.
T Consensus 165 yvn~ 168 (266)
T 2iwa_A 165 WANI 168 (266)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8876
No 248
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.74 E-value=2.7 Score=39.22 Aligned_cols=188 Identities=14% Similarity=0.186 Sum_probs=112.9
Q ss_pred CCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc---CceEEEEEc-CCeEEEEEecCCCeeeeEEEEeecCcE
Q 016020 187 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD---KHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~---~~VqEIkiS-pg~~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
-+.=+-+|+.+++..|-.-.++.+-..|+. .+.+-++.- .+.-.|.+. +|.+++..... +. +-++.+.+...
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~-~~--l~~~~v~~~~~ 103 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERD-YA--IYVISLTPNSE 103 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTT-TE--EEEEEECTTCC
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCC-Cc--EEEEEcCCCCe
Confidence 345566665555555544445555556665 555555532 466666665 45544443444 22 44777765443
Q ss_pred ---EEEEEeec---ccCCc---cchhhhhcceeeEeecCCeeeEEEcc---cc-eEEEe------cccccCCCceEEEee
Q 016020 263 ---LKVFYHLL---HRNKK---VDFIEQFNEKLLVKQENENLQILDVR---NA-ELMEV------SRTEFMTPSAFIFLY 323 (396)
Q Consensus 263 ---l~s~~~~L---~~sk~---i~FiE~~~ekLLIKQed~~L~I~Dv~---~~-ki~~v------~~t~~~~PsAFiFly 323 (396)
+....+.+ +.++. +.+-+ .++.|++-+|..+..||.+. ++ .+... .......+++..|-+
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 22333222 22222 77777 46678888888788888775 11 12211 112344789999999
Q ss_pred cCeEEEEEEc--CeEEEEecccceee--eecc--ccc----cCCC----CCCCcEEEccCCcEEEEeccC
Q 016020 324 ENQLFLTFRN--RTVAVWNFRGELVT--SFED--HLL----WHPD----CNTNNIYITSDQDLIISYCKA 379 (396)
Q Consensus 324 ~~qLFLTfs~--gti~iWd~~geL~t--~fed--h~l----~~~~----c~~n~~~it~~qd~ii~~~~~ 379 (396)
..+.++..|+ +.+-++|.+|+.+. ++.. |-| ..|+ =+++++||++..+++-.|=|.
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC-
T ss_pred CCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEec
Confidence 8888888887 89999999998444 3332 222 2233 578999999999998877543
No 249
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.61 E-value=1.1 Score=41.93 Aligned_cols=179 Identities=13% Similarity=0.155 Sum_probs=106.6
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceE---EEEeccCceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecC
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSISDKHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDG 260 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~---lysIs~~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG 260 (396)
+..|-=++||...|++--.+...+.+..+++.+... +..-.-.....+.+.+ +-.|.+.....+. +.+++.. |
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~--I~~~~~d-G 110 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNR--IEVSNLD-G 110 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTE--EEEEETT-S
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCE--EEEEECC-C
Confidence 566778999998899999999999999999887631 2211113455677763 3333344443332 3455543 4
Q ss_pred cEEEEEE-eecccCCccchhhhhcceeeEeec--CCeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc-Ce
Q 016020 261 TVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQE--NENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-RT 335 (396)
Q Consensus 261 ~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQe--d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~-gt 335 (396)
+....+. --+.+-..|.+-+ .+.+|++-.. +..|..+|+.-.....+..+....|....+.+ ++.||++=+. +.
T Consensus 111 ~~~~~l~~~~~~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~ 189 (318)
T 3sov_A 111 SLRKVLFWQELDQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 189 (318)
T ss_dssp CSCEEEECSSCSSEEEEEEEG-GGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcEEEEEeCCCCCccEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCE
Confidence 3333221 1111111233322 4567887763 56788888765444444456678999999997 7888988766 89
Q ss_pred EEEEecccc-eeeeeccccccCCC---CCCCcEEEcc
Q 016020 336 VAVWNFRGE-LVTSFEDHLLWHPD---CNTNNIYITS 368 (396)
Q Consensus 336 i~iWd~~ge-L~t~fedh~l~~~~---c~~n~~~it~ 368 (396)
|..+|++|. +.+-.++ .+.+|+ --.+.+|+|.
T Consensus 190 I~~~d~dG~~~~~~~~~-~~~~P~glav~~~~lywtd 225 (318)
T 3sov_A 190 IHKSNLDGTNRQAVVKG-SLPHPFALTLFEDILYWTD 225 (318)
T ss_dssp EEEEETTSCSCEEEECS-CCSCEEEEEEETTEEEEEE
T ss_pred EEEEcCCCCceEEEecC-CCCCceEEEEeCCEEEEEe
Confidence 999999984 3322222 233343 2344566653
No 250
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.52 E-value=0.15 Score=53.34 Aligned_cols=183 Identities=9% Similarity=0.090 Sum_probs=107.5
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccC----ceEEEEecc--CceEEEEEc-CCeEEEEEecCCCeeeeEEEE
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KHVQEIKIS-PGIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlkn----Ys~lysIs~--~~VqEIkiS-pg~~Ll~~q~~~~~iplkIl~ 256 (396)
.+..|--+.||...+++...+...+.++++++.+ ......+.. ....-|.+. .+-.|.+.....+. |.+++
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~--I~v~d 481 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT--VSVAD 481 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSC--EEEEB
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCe--EEEEe
Confidence 3678999999998999999888888999999876 222222221 234456665 23333344333232 35566
Q ss_pred eecCcEEEEEE-eecccCCccchhhhhcceeeEeecC--CeeeEEEcccceEEEecccccCCCceEEEeec-CeEEEEEE
Q 016020 257 IEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLTFR 332 (396)
Q Consensus 257 IetG~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQed--~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~-~qLFLTfs 332 (396)
.. |+....+. .-+..-..|.+-+ .+.+|++-..+ ..|..+|+.......+..+....|.+..+.++ +.||++=+
T Consensus 482 ~d-g~~~~~l~~~~~~~P~giavDp-~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 482 TK-GVKRKTLFREQGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp SS-SCCEEEECCCSSCCCCCEECCS-SSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred cC-CCceEEEEeCCCCCcceEEEcc-CCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence 54 43333322 1122222244322 46677776644 56777777654444444556788999999874 77888876
Q ss_pred c-CeEEEEecccc-eeeeecc-ccccCCC---CCCCcEEEccCC
Q 016020 333 N-RTVAVWNFRGE-LVTSFED-HLLWHPD---CNTNNIYITSDQ 370 (396)
Q Consensus 333 ~-gti~iWd~~ge-L~t~fed-h~l~~~~---c~~n~~~it~~q 370 (396)
. +.|..+|++|. +.+-+.. ..+.+|. --.+.+|+|.-+
T Consensus 560 ~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~ 603 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII 603 (699)
T ss_dssp TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST
T ss_pred CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC
Confidence 6 79999999994 3333322 2223333 234567777643
No 251
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.42 E-value=2.8 Score=45.03 Aligned_cols=193 Identities=9% Similarity=0.088 Sum_probs=117.5
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCc----eEEEEec--cCceEEEEEcC-CeEEEEEecCCCeeeeEEEE
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKHVQEIKISP-GIMLLIFNRSSSHVPLKILS 256 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknY----s~lysIs--~~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~ 256 (396)
.+++|-=+.||..+++|.-.+...+.++.+++.+. .....+. -....-|++.+ +-.|.+.....+ -|.+++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~--~I~v~~ 499 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVAD 499 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT--EEEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCC--eEEEEe
Confidence 47788889999999999999999999999998763 2222233 15566777763 324445554433 334555
Q ss_pred eecCcEEEEEE-eecccCCccchhhhhcceeeEeecC--CeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEE
Q 016020 257 IEDGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFR 332 (396)
Q Consensus 257 IetG~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQed--~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs 332 (396)
+. |+....+. ..|..-..|.+-+ .+.+|++---+ ..|...++.......+..+...+|.+..+-+ ++.||++=.
T Consensus 500 ld-G~~~~~l~~~~l~~P~gIaVDp-~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 500 TK-GVKRKTLFRENGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp TT-SSSEEEEEECTTCCEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CC-CCeEEEEEeCCCCCcceEEEec-CCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC
Confidence 53 44443332 1111112233322 45688887644 5788888877666666667778999999884 678888865
Q ss_pred c-CeEEEEecccc-eeeeeccc-cccCCC---CCCCcEEEccCC-cEEEEeccCC
Q 016020 333 N-RTVAVWNFRGE-LVTSFEDH-LLWHPD---CNTNNIYITSDQ-DLIISYCKAE 380 (396)
Q Consensus 333 ~-gti~iWd~~ge-L~t~fedh-~l~~~~---c~~n~~~it~~q-d~ii~~~~~~ 380 (396)
. +.|...|++|. +.+-...+ .+.+|. -..+.+|+|... .-|...-|..
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCC
Confidence 5 79999999994 44443332 222333 345677777533 4444444433
No 252
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.30 E-value=1.7 Score=41.52 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=106.4
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC--CeEEEEEecCCCeeeeEEEEee
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP--GIMLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp--g~~Ll~~q~~~~~iplkIl~Ie 258 (396)
..+..|.=+-+|..+|++...+...+.+.++++.+-....-+.+ ..-..|++.| |.|....... .--+..++.
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~--~~~I~r~~~- 232 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN--TPRIEASSM- 232 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS--SCEEEEEET-
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC--CCEEEEEeC-
Confidence 34678999999998999999999999999999976554333443 5678899984 4554443332 112233332
Q ss_pred cCcEEEEEE-eecccCCccchhhhhcceeeEee-cCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-Ce
Q 016020 259 DGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RT 335 (396)
Q Consensus 259 tG~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gt 335 (396)
+|+....+. --+..-.-|.|-+ .+..|++-. ....|..+|+..+....+.......|.+..+ .++.||+|=.. +.
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~-~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~ 310 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS 310 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEG-GGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE
T ss_pred CCCCcEEEEECCCCCeeeEEEeC-CCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCe
Confidence 454443332 1122223355544 466676654 5677889998765555555555678888877 88999999876 79
Q ss_pred EEEEe-cccceeeeec
Q 016020 336 VAVWN-FRGELVTSFE 350 (396)
Q Consensus 336 i~iWd-~~geL~t~fe 350 (396)
|..+| ..|+.++.+.
T Consensus 311 V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 311 INSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEEETTTCCSCEEEE
T ss_pred EEEEECCCCcceEEEc
Confidence 99999 7886555444
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.11 E-value=2.1 Score=40.16 Aligned_cols=137 Identities=11% Similarity=0.049 Sum_probs=87.8
Q ss_pred CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee-cCCeeeEEEcccceE
Q 016020 227 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL 305 (396)
Q Consensus 227 ~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki 305 (396)
...|-+.+++| .|....+....=.+..+|++||+.+.+... +..-.-+=+-..++.|++-- .++.+.+||..+.++
T Consensus 21 ~ftqGL~~~~~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLRG-HLYESTGETGRSSVRKVDLETGRILQRAEV--PPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEETT-EEEEEECCTTSCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEECC-EEEEECCCCCCceEEEEECCCCCEEEEEeC--CCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 55788889987 455666664445789999999999998863 32211011122355655543 578899999999988
Q ss_pred EEecccccCCCceEEEeecCeEEEEEEcCeEEEEeccc-ceeeeecc----c---cccCCCCCCCcEEEcc
Q 016020 306 MEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-ELVTSFED----H---LLWHPDCNTNNIYITS 368 (396)
Q Consensus 306 ~~v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g-eL~t~fed----h---~l~~~~c~~n~~~it~ 368 (396)
+..-+.. ..+.+.. ..++.||+|=-+++|.++|.+. +++.+++= . .+=...|.++.+|+.-
T Consensus 98 ~~ti~~~-~~Gwglt-~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanv 166 (243)
T 3mbr_X 98 RARFRYP-GEGWALT-SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANV 166 (243)
T ss_dssp EEEEECS-SCCCEEE-ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred EEEEeCC-CCceEEe-eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEE
Confidence 8754433 2455554 3356678876668899999876 54444332 1 1222336788888765
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.01 E-value=5.2 Score=40.60 Aligned_cols=59 Identities=7% Similarity=0.134 Sum_probs=39.9
Q ss_pred CCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEcCeEEEEecc-cceeeeec
Q 016020 292 NENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFE 350 (396)
Q Consensus 292 d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~-geL~t~fe 350 (396)
++.|.+||+.+++++-..+........-+-..++.+|+.-.+|.+..||.+ |+++-+++
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 478999999999886543333222223333446777887667999999975 57776665
No 255
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.97 E-value=0.72 Score=47.91 Aligned_cols=74 Identities=12% Similarity=-0.004 Sum_probs=48.7
Q ss_pred CeeeEEEcccceEEEecccccCCCceEEEeecC-eEEEEEEcCeEEEEecc-cceeeeecccccc--CCC--CCCCcEEE
Q 016020 293 ENLQILDVRNAELMEVSRTEFMTPSAFIFLYEN-QLFLTFRNRTVAVWNFR-GELVTSFEDHLLW--HPD--CNTNNIYI 366 (396)
Q Consensus 293 ~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~-qLFLTfs~gti~iWd~~-geL~t~fedh~l~--~~~--c~~n~~~i 366 (396)
+.|..||+.|+|+.-..+.+...... .+...+ -+|..-.+|++..||.+ |+++-+++-...- .|- -.+++.||
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g-~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGG-TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCC-EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCc-cceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 67999999999988765555444444 444444 45665556999999977 6877666533221 222 35788887
Q ss_pred c
Q 016020 367 T 367 (396)
Q Consensus 367 t 367 (396)
+
T Consensus 534 ~ 534 (689)
T 1yiq_A 534 T 534 (689)
T ss_dssp E
T ss_pred E
Confidence 6
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.96 E-value=2.4 Score=41.57 Aligned_cols=157 Identities=8% Similarity=0.074 Sum_probs=97.8
Q ss_pred ccCCCCeEEeeC--CCCcEEEeecCCCeEEEEeccCceEEEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEee-c
Q 016020 184 SLKWPGFVEFDD--VNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIE-D 259 (396)
Q Consensus 184 ~l~~PgfVEFDd--~NgkIlt~~a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~Ie-t 259 (396)
.|.+|..+-+|+ -.|.+...+.. +.++++|+++.+...-+.. .....|.+++.=-|++........+-.++.+. +
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 789999999997 36888887776 8899999988775554544 56889999965446666543222222222221 2
Q ss_pred CcEE--EEEEeecccCCccchhhhhcceeeEee-cCCeeeEEEcccceE-EEec-ccccCCCceEEEeecCe-EEEEEEc
Q 016020 260 GTVL--KVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL-MEVS-RTEFMTPSAFIFLYENQ-LFLTFRN 333 (396)
Q Consensus 260 G~~l--~s~~~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki-~~v~-~t~~~~PsAFiFly~~q-LFLTfs~ 333 (396)
|... ..+. .+.+-..+.+-+ .+..|++-. .++.|..+|..++++ ..+. ......|....|.++++ ||++-+.
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~-~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHP-QNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECT-TTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCeecccccc-ccCCCCEEEEeC-CCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 2211 1111 122223355444 245677655 567899999988877 2222 12223344577788887 8988876
Q ss_pred -CeEEEEeccc
Q 016020 334 -RTVAVWNFRG 343 (396)
Q Consensus 334 -gti~iWd~~g 343 (396)
+.|..++.++
T Consensus 294 ~~~I~~~~~d~ 304 (433)
T 4hw6_A 294 KHCIYRVDYNR 304 (433)
T ss_dssp TTEEEEEEBCT
T ss_pred CCEEEEEeCCC
Confidence 7999988774
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.93 E-value=1.4 Score=45.14 Aligned_cols=144 Identities=10% Similarity=0.138 Sum_probs=94.5
Q ss_pred CCCCeEEeeCCCCc---EEEeecCCCeEEEEeccCceEEEEeccCc--------------------------------eE
Q 016020 186 KWPGFVEFDDVNGK---VLTYSAQDSIYKVFDLKNYTMLYSISDKH--------------------------------VQ 230 (396)
Q Consensus 186 ~~PgfVEFDd~Ngk---Ilt~~a~d~~YrVwdlknYs~lysIs~~~--------------------------------Vq 230 (396)
..|-+++.+..+|+ ++.....++.+.++|.++.+.+.+..-.. .+
T Consensus 321 ~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~ 400 (582)
T 1flg_A 321 NELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGK 400 (582)
T ss_dssp CCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCC
T ss_pred CCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCC
Confidence 45777777656784 66666789999999999999998775422 22
Q ss_pred EEEEcCCeE---------------EEEEecC-------------------------------CCeeeeEEEEeecCcEEE
Q 016020 231 EIKISPGIM---------------LLIFNRS-------------------------------SSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 231 EIkiSpg~~---------------Ll~~q~~-------------------------------~~~iplkIl~IetG~~l~ 264 (396)
..-++|+.+ ++..... ...-.|.-||+.||+.+-
T Consensus 401 ~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W 480 (582)
T 1flg_A 401 AVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVW 480 (582)
T ss_dssp CEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEE
T ss_pred ceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEE
Confidence 233444321 1111100 013457788999999988
Q ss_pred EEEeecccCC-ccchhhhhcceeeEeecCCeeeEEEcccceEEE---ecccccCCCceEEEeecCeEEEEEEcC
Q 016020 265 VFYHLLHRNK-KVDFIEQFNEKLLVKQENENLQILDVRNAELME---VSRTEFMTPSAFIFLYENQLFLTFRNR 334 (396)
Q Consensus 265 s~~~~L~~sk-~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~---v~~t~~~~PsAFiFly~~qLFLTfs~g 334 (396)
+.....+... .+- .-+..+++...|..|++||..|+|++- ++.....+|- +|..++++|+++.+|
T Consensus 481 ~~~~~~~~~~g~~~---tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~--~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 481 EHKEHLPLWAGVLA---TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPI--TWEQDGEQYLGVTVG 549 (582)
T ss_dssp EEEESSCCCSCCEE---ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEEC
T ss_pred EecCCCCCcccceE---eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCce--EEEECCEEEEEEEcc
Confidence 7764322111 111 247889999999999999999999875 4444444454 446899999998886
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.62 E-value=4.3 Score=37.31 Aligned_cols=173 Identities=9% Similarity=0.053 Sum_probs=98.1
Q ss_pred cCCCeEEEEeccCceEEEEecc-CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeec---CcEEEEEE-eecccCCccch
Q 016020 205 AQDSIYKVFDLKNYTMLYSISD-KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIED---GTVLKVFY-HLLHRNKKVDF 278 (396)
Q Consensus 205 a~d~~YrVwdlknYs~lysIs~-~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~Iet---G~~l~s~~-~~L~~sk~i~F 278 (396)
++...+++.|+.+.+....+.. .+...+.+.+ +-.|.+...... -+..+++.+ |+....+. .-+..-.-+.+
T Consensus 7 ~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~--~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 84 (316)
T 1ijq_A 7 TNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 84 (316)
T ss_dssp ECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTT--EEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCC--cEEEEECCCCCCCcccEEEEeCCCCCcCEEEE
Confidence 3445678888888665555554 7788888875 334444444422 344455554 22222211 01111112333
Q ss_pred hhhhcceeeEe-ecCCeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc--CeEEEEecccceeeeeccccc
Q 016020 279 IEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN--RTVAVWNFRGELVTSFEDHLL 354 (396)
Q Consensus 279 iE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~--gti~iWd~~geL~t~fedh~l 354 (396)
-. .+..|++- ..++.|.++|+..+....+..+....|.+...-+ ++.||+|=.. +.|...+.+|...+.+-...+
T Consensus 85 d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~ 163 (316)
T 1ijq_A 85 DW-IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 163 (316)
T ss_dssp ET-TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred ee-cCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCC
Confidence 22 35667665 5678899999876655555455677898888876 7788888654 689999999964443322223
Q ss_pred cCCC-----CCCCcEEEccCCcEEEEeccCC
Q 016020 355 WHPD-----CNTNNIYITSDQDLIISYCKAE 380 (396)
Q Consensus 355 ~~~~-----c~~n~~~it~~qd~ii~~~~~~ 380 (396)
..|+ ..++++|++....=-|..+..+
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 3344 3457888876543334444443
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.60 E-value=7.6 Score=40.06 Aligned_cols=81 Identities=7% Similarity=0.008 Sum_probs=58.4
Q ss_pred eeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEE---ecccccCCCceEEEeecCe
Q 016020 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME---VSRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 250 iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~---v~~t~~~~PsAFiFly~~q 326 (396)
-.|.-||..||+.+-+....-+... -- +-.-+..+++...+..|.+||..+++++- +.......|-.+ ..+++
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~-~~-~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~--~~~G~ 513 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNG-GT-LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF--ELAGR 513 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCC-CE-EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcC-ce-eEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE--EECCE
Confidence 4588899999999887764222111 11 12257889999999999999999999875 443444455544 68999
Q ss_pred EEEEEEcC
Q 016020 327 LFLTFRNR 334 (396)
Q Consensus 327 LFLTfs~g 334 (396)
+|++..+|
T Consensus 514 ~yva~~~G 521 (668)
T 1kv9_A 514 QYVAIMAG 521 (668)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999886
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.36 E-value=2.9 Score=39.33 Aligned_cols=162 Identities=15% Similarity=0.178 Sum_probs=104.9
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC--CeEEEEEecCCCeeeeEEEEeec
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP--GIMLLIFNRSSSHVPLKILSIED 259 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp--g~~Ll~~q~~~~~iplkIl~Iet 259 (396)
.+..|.-+-+|..+|++...+...+.+.++++.+-....-+.. ..-..|++.| |.|....... .--+..++. +
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~--~~~I~r~~~-d 190 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN--TPRIEASSM-D 190 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS--SCEEEEEET-T
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC--CCEEEEEeC-C
Confidence 4678999999999999999999999999999987554444433 5678899985 4554443332 112223332 4
Q ss_pred CcEEEEEE-eecccCCccchhhhhcceeeEee-cCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-CeE
Q 016020 260 GTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RTV 336 (396)
Q Consensus 260 G~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gti 336 (396)
|+....+. -.+..-.-|.|-+ .+..|++-. ....|..+|+..+....+.......|.+..+ .++.||+|=.. +.|
T Consensus 191 G~~~~~~~~~~~~~PnGla~d~-~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V 268 (349)
T 3v64_C 191 GSGRRIIADTHLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSI 268 (349)
T ss_dssp SCSCEESCCSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred CCCcEEEEECCCCCcceEEEeC-CCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeE
Confidence 54433221 0112222244443 466777665 5667888998765555555555678888777 89999999776 789
Q ss_pred EEEe-cccceeeeec
Q 016020 337 AVWN-FRGELVTSFE 350 (396)
Q Consensus 337 ~iWd-~~geL~t~fe 350 (396)
...| ..|+.++.+.
T Consensus 269 ~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 269 NSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEETTTCCSCEEEE
T ss_pred EEEEccCCCccEEec
Confidence 9998 7786444443
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.13 E-value=4.7 Score=36.30 Aligned_cols=174 Identities=11% Similarity=0.093 Sum_probs=102.8
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec-cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEE
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLK 264 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs-~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~ 264 (396)
.+|.-+-+|+ +|++...+...+.+.+||..+- ....+. ......|.++++=.|++.....+..-+-.++..+|+...
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 6888899998 8899888888888889998763 332222 367889999864345555433222344556777888654
Q ss_pred EEEeecccCCc---cchhhhhcceeeEee-cCCeeeEEEcccc--eEEEe--------cccccCCCceEEEeecC-eEEE
Q 016020 265 VFYHLLHRNKK---VDFIEQFNEKLLVKQ-ENENLQILDVRNA--ELMEV--------SRTEFMTPSAFIFLYEN-QLFL 329 (396)
Q Consensus 265 s~~~~L~~sk~---i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~--ki~~v--------~~t~~~~PsAFiFly~~-qLFL 329 (396)
-... +.... +.+. .+..+++-. .+..|..+|..++ ++... ....+..|... .+++ .||+
T Consensus 110 ~~~~--~~~~~~~g~~~~--~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 110 LLTL--PDAIFLNGITPL--SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEC--TTCSCEEEEEES--SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEeC--CCccccCccccc--CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 3331 11111 1111 233455544 4778889998765 33321 12334456665 6665 6888
Q ss_pred EEEc-CeEEEEeccc--ce--eeeeccccccCCC----CCCCcEEEccC
Q 016020 330 TFRN-RTVAVWNFRG--EL--VTSFEDHLLWHPD----CNTNNIYITSD 369 (396)
Q Consensus 330 Tfs~-gti~iWd~~g--eL--~t~fedh~l~~~~----c~~n~~~it~~ 369 (396)
+-+. +.|..+|.++ .+ ...+-+ +..|+ -+++++|++..
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATH 230 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECB
T ss_pred EeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeC
Confidence 8776 7999999984 32 111211 11233 34677888863
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.48 E-value=4.6 Score=38.87 Aligned_cols=162 Identities=13% Similarity=0.162 Sum_probs=105.9
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC--CeEEEEEecCCCeeeeEEEEee
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP--GIMLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp--g~~Ll~~q~~~~~iplkIl~Ie 258 (396)
..+..|.=+-+|..+|++...+...+.+.+.++.+-...--+.+ .....|++.| |.|.......+. -+..++.
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~--~I~~~~~- 232 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPA--KIKKGGL- 232 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSC--CEEEEET-
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCC--EEEEEeC-
Confidence 35678999999999999999999999999999987654444443 5688999976 555544433322 2333343
Q ss_pred cCcEEEEEE-eecccCCccchhhhhcceeeEe-ecCCeeeEEEcccceEEEecc--cccCCCceEEEeecCeEEEEEEc-
Q 016020 259 DGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTFRN- 333 (396)
Q Consensus 259 tG~~l~s~~-~~L~~sk~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~--t~~~~PsAFiFly~~qLFLTfs~- 333 (396)
+|+....+. --|..-+-|.+-. .+..|++- .....|..+|+..+....+.. .....|.+.-. .++.||+|=..
T Consensus 233 dG~~~~~~~~~~l~~P~glavd~-~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~ 310 (400)
T 3p5b_L 233 NGVDIYSLVTENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIIN 310 (400)
T ss_dssp TSCSCEEEECSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSS
T ss_pred CCCccEEEEECCCCceEEEEEEe-CCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCC
Confidence 455444332 1112222344443 45677665 467789999987655554433 34567776654 88899999877
Q ss_pred CeEEEEe-cccceeeee
Q 016020 334 RTVAVWN-FRGELVTSF 349 (396)
Q Consensus 334 gti~iWd-~~geL~t~f 349 (396)
+.|..+| ..|+.++.+
T Consensus 311 ~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 311 EAIFSANRLTGSDVNLL 327 (400)
T ss_dssp CSEEEEESSSCCCCEEE
T ss_pred CeEEEEEcCCCCceEEE
Confidence 7899998 777544444
No 263
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.32 E-value=6.3 Score=40.70 Aligned_cols=181 Identities=13% Similarity=0.172 Sum_probs=108.3
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceE-EEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEee
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-LYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~-lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~Ie 258 (396)
..++.|-=++||..+|++.-.+...+.+..|++.+-.. ...+.. .....+++.+ +-.|.+.....+. +.+.+.
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~--I~v~~~- 113 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNR--IEVSNL- 113 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTE--EEEEET-
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCE--EEEEEC-
Confidence 34677888999999999999899889999999987642 333333 5778888885 4455555554333 344554
Q ss_pred cCcEEEEEE-eecccCCccchhhhhcceeeEeecC--CeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc-
Q 016020 259 DGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQEN--ENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN- 333 (396)
Q Consensus 259 tG~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQed--~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~- 333 (396)
+|+....+. -.|.+-..|.+-+ .+.+|++---+ ..|.-.++.-.....+..+...+|.+..+-+ ++.||++=..
T Consensus 114 dG~~~~~l~~~~l~~P~~Iavdp-~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~ 192 (619)
T 3s94_A 114 DGSLRKVLFWQELDQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKL 192 (619)
T ss_dssp TSCSCEEEECSSCSCCCCEEEET-TTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTT
T ss_pred CCCCEEEEEeCCCCCCceEEEec-CCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCC
Confidence 354433322 2223333344333 46688887644 4555566655444444455678999999987 6888988665
Q ss_pred CeEEEEecccc-eeeeeccccccCCC---CCCCcEEEcc
Q 016020 334 RTVAVWNFRGE-LVTSFEDHLLWHPD---CNTNNIYITS 368 (396)
Q Consensus 334 gti~iWd~~ge-L~t~fedh~l~~~~---c~~n~~~it~ 368 (396)
+.|...|.+|. +.+-.++. +-+|. .-.+++|+|.
T Consensus 193 ~~I~~~~~dG~~~~~~~~~~-~~~P~gi~~~~~~ly~td 230 (619)
T 3s94_A 193 NFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYWTD 230 (619)
T ss_dssp CCEEEESSSCCEEC----------CCCEEESSSEEEEEC
T ss_pred CeEEEecCCCCccEEEEeCC-CCCceEEEEeCCEEEEec
Confidence 79999999994 33322221 23333 3444666664
No 264
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.97 E-value=2.9 Score=43.42 Aligned_cols=81 Identities=7% Similarity=0.000 Sum_probs=58.6
Q ss_pred eeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEE---ecccccCCCceEEEeecCe
Q 016020 250 VPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME---VSRTEFMTPSAFIFLYENQ 326 (396)
Q Consensus 250 iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~---v~~t~~~~PsAFiFly~~q 326 (396)
-.|..||+.||+.+-.+.+--+-.. --+. .-+..+++...|+.|++||..|+|++- ++.+....|.. |..+++
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~-g~~~-tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~t--y~~~G~ 530 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNG-GTLS-TAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVT--YSVDGE 530 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCC-CEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTE
T ss_pred eeEEEEECCCCCeEeEccCCCCccC-ccce-ECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceE--EEECCE
Confidence 4588999999999888764211111 1222 256788899999999999999999874 44444456644 478999
Q ss_pred EEEEEEcC
Q 016020 327 LFLTFRNR 334 (396)
Q Consensus 327 LFLTfs~g 334 (396)
.|+++..|
T Consensus 531 qyv~~~~G 538 (689)
T 1yiq_A 531 QYVTFMAG 538 (689)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999876
No 265
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.58 E-value=7.5 Score=40.13 Aligned_cols=156 Identities=12% Similarity=0.187 Sum_probs=95.6
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecCc
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
++.|-=++||..+|++.-++...+.++.+++.+-...--+.. ....-+++.. +-.|.......+.| .+.+.. |+
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I--~v~~~~-G~ 424 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRI--EVTRLN-GT 424 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE--EEEETT-SC
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcE--EEEeCC-CC
Confidence 567777999999999999998888888899876433222332 4566777763 33344444443333 344443 44
Q ss_pred EEEEEE-eecccCCccchhhhhcceeeEeecCC--eeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc-CeE
Q 016020 262 VLKVFY-HLLHRNKKVDFIEQFNEKLLVKQENE--NLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-RTV 336 (396)
Q Consensus 262 ~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQed~--~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~-gti 336 (396)
....+. .-|.+-..|.+-+ .+.+|++---++ .|.-.++--.....+..+...+|....+-+ ++.||++=+. +.|
T Consensus 425 ~~~~l~~~~l~~P~~iavdp-~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I 503 (619)
T 3s94_A 425 MRKILISEDLEEPRAIVLDP-MVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKI 503 (619)
T ss_dssp SCEEEECTTCCSEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred eEEEEEECCCCCeeeEEEEc-CCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEE
Confidence 332222 1111112233333 356777765443 444445543334444456688999988886 7889998766 799
Q ss_pred EEEecccc
Q 016020 337 AVWNFRGE 344 (396)
Q Consensus 337 ~iWd~~ge 344 (396)
+..+++|.
T Consensus 504 ~~~~~dG~ 511 (619)
T 3s94_A 504 EVMNTDGT 511 (619)
T ss_dssp EEEESSSC
T ss_pred EEEecCCC
Confidence 99999994
No 266
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=91.55 E-value=4.5 Score=41.50 Aligned_cols=162 Identities=11% Similarity=0.127 Sum_probs=101.9
Q ss_pred eecccCCCCeEEeeCC-CCcEEEeecCCCeEEEEeccCceEEEEecc-----CceEEEEE-------cC-CeEEEEEecC
Q 016020 181 ESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KHVQEIKI-------SP-GIMLLIFNRS 246 (396)
Q Consensus 181 ~~~~l~~PgfVEFDd~-NgkIlt~~a~d~~YrVwdlknYs~lysIs~-----~~VqEIki-------Sp-g~~Ll~~q~~ 246 (396)
....+..|.++.||+. .+.+...+.....+++.|+++.....-+.. +....|.+ ++ |-+|++....
T Consensus 134 ~~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 134 KCCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp SCBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred cccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 3566889999999974 577777666667888999998664443332 35788999 63 3345555544
Q ss_pred C-C---eeeeEEEEeec-CcEE-----EEEEeecccCCccchhhhhcceeeE-eecCCeeeEEEcc-------cceE---
Q 016020 247 S-S---HVPLKILSIED-GTVL-----KVFYHLLHRNKKVDFIEQFNEKLLV-KQENENLQILDVR-------NAEL--- 305 (396)
Q Consensus 247 ~-~---~iplkIl~Iet-G~~l-----~s~~~~L~~sk~i~FiE~~~ekLLI-KQed~~L~I~Dv~-------~~ki--- 305 (396)
. + ...+.+++... |+.. ..+. .+.+-.-+..-+ .+..|++ -..+..|..+|+. ++++
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp-~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHP-INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECT-TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred CCCcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcC-CCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 3 2 23344554343 3321 1111 122333454444 3455554 6677789999998 5654
Q ss_pred --------E-E-ecccccCCCceEEEeecCe-EEEEEEc-CeEEEEecccc
Q 016020 306 --------M-E-VSRTEFMTPSAFIFLYENQ-LFLTFRN-RTVAVWNFRGE 344 (396)
Q Consensus 306 --------~-~-v~~t~~~~PsAFiFly~~q-LFLTfs~-gti~iWd~~ge 344 (396)
. + .......+|....|.++++ ||++-+. ..|..+|.+|.
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 1 1 1223346789999999998 7888776 79999888874
No 267
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=91.01 E-value=3.3 Score=39.35 Aligned_cols=137 Identities=11% Similarity=0.096 Sum_probs=86.0
Q ss_pred CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee-cCCeeeEEEcccceE
Q 016020 227 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAEL 305 (396)
Q Consensus 227 ~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki 305 (396)
...|-+.+++| .|....+....=.+..+|++||+.+.++. |+..-.-+=+-..++.|++-- .++.+.+||..+.++
T Consensus 43 ~ftqGL~~~~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~--l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 43 AFTEGFFYRNG-YFYESTGLNGRSSIRKVDIESGKTLQQIE--LGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp CEEEEEEEETT-EEEEEEEETTEEEEEEECTTTCCEEEEEE--CCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred cccceEEEECC-EEEEECCCCCCceEEEEECCCCcEEEEEe--cCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 33577888877 66666666555589999999999999886 333211111223466666654 477899999999888
Q ss_pred EEecccccCCCceEEEeecCeEEEEEEcCeEEEEeccc-ceeeeec----cccccC---CCCCCCcEEEcc
Q 016020 306 MEVSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-ELVTSFE----DHLLWH---PDCNTNNIYITS 368 (396)
Q Consensus 306 ~~v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g-eL~t~fe----dh~l~~---~~c~~n~~~it~ 368 (396)
+..-+... .+.++.+ .++.||++=-+++|.++|... +++.+++ ++-.-. ..|.++.+|+..
T Consensus 120 ~~ti~~~~-eG~glt~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~ 188 (262)
T 3nol_A 120 VRSFNYDG-EGWGLTH-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV 188 (262)
T ss_dssp EEEEECSS-CCCCEEE-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred EEEEECCC-CceEEec-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE
Confidence 87444322 3344442 345677765457799999875 5444432 222222 236678888765
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.09 E-value=10 Score=34.06 Aligned_cols=155 Identities=14% Similarity=0.107 Sum_probs=89.3
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceE-EEEecc--------------------CceEEEEEcC-CeEE
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-LYSISD--------------------KHVQEIKISP-GIML 240 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~-lysIs~--------------------~~VqEIkiSp-g~~L 240 (396)
..+.+|.=+-+|+ +|+++-.+..++.+..||..+.+. .|.... .....|.+.+ +=.|
T Consensus 16 g~~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l 94 (322)
T 2fp8_A 16 APSYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQL 94 (322)
T ss_dssp CSSSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEE
T ss_pred CccCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcE
Confidence 4467888888887 577444455566677778776432 232211 3577888885 3344
Q ss_pred EEEecCCCeeeeEEEEeecCcEEEEEEee-----cccCCccchhhhhcceeeEeec------------------CCeeeE
Q 016020 241 LIFNRSSSHVPLKILSIEDGTVLKVFYHL-----LHRNKKVDFIEQFNEKLLVKQE------------------NENLQI 297 (396)
Q Consensus 241 l~~q~~~~~iplkIl~IetG~~l~s~~~~-----L~~sk~i~FiE~~~ekLLIKQe------------------d~~L~I 297 (396)
++....+. +..++..+|+.. .+... +..-..+.+-+. ...|++.-. ++.|..
T Consensus 95 ~v~d~~~~---i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 95 YIVDCYYH---LSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQR-TGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp EEEETTTE---EEEECTTCEECE-EEESEETTEECSCEEEEEECTT-TCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred EEEECCCC---EEEEeCCCCEEE-EecccCCCCcccccceEEEecC-CCEEEEECCcccccccccceehcccCCCceEEE
Confidence 44433332 556666655422 22100 011111222210 235665432 256888
Q ss_pred EEcccceEEEecccccCCCceEEEeecCe-EEEEEEc-CeEEEEecccc
Q 016020 298 LDVRNAELMEVSRTEFMTPSAFIFLYENQ-LFLTFRN-RTVAVWNFRGE 344 (396)
Q Consensus 298 ~Dv~~~ki~~v~~t~~~~PsAFiFly~~q-LFLTfs~-gti~iWd~~ge 344 (396)
||..++++..+. .....|....+.++++ ||++=+. +.|..|+.+++
T Consensus 170 ~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 170 YDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp EETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred EeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 888777765443 3457788888888876 8888655 89999999863
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=89.96 E-value=2.3 Score=44.27 Aligned_cols=150 Identities=11% Similarity=0.017 Sum_probs=79.3
Q ss_pred CeEEee-CCCCcEEEeecCC-----CeEEEEeccCc-eEEE-EeccCceEEEEEcCCe-EEEEEecCCCeee--eEEEEe
Q 016020 189 GFVEFD-DVNGKVLTYSAQD-----SIYKVFDLKNY-TMLY-SISDKHVQEIKISPGI-MLLIFNRSSSHVP--LKILSI 257 (396)
Q Consensus 189 gfVEFD-d~NgkIlt~~a~d-----~~YrVwdlknY-s~ly-sIs~~~VqEIkiSpg~-~Ll~~q~~~~~ip--lkIl~I 257 (396)
+.+.|. + +|+.|||.... ..++|+|+.+. +.+- .+. .....+.|||+- -|+......+.-| +..+++
T Consensus 177 ~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 177 MEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-EECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred eeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-CceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 446788 5 79989887653 35999999998 6321 121 123568899763 3333333223344 445566
Q ss_pred ecCcEEEEEEeecccC---CccchhhhhcceeeEee---cCCeeeEEEcccc--eE--EEecccccCCCceEE-EeecCe
Q 016020 258 EDGTVLKVFYHLLHRN---KKVDFIEQFNEKLLVKQ---ENENLQILDVRNA--EL--MEVSRTEFMTPSAFI-FLYENQ 326 (396)
Q Consensus 258 etG~~l~s~~~~L~~s---k~i~FiE~~~ekLLIKQ---ed~~L~I~Dv~~~--ki--~~v~~t~~~~PsAFi-Fly~~q 326 (396)
.+|+....+.+--... -.+.+.+ .+.+|++-. ....|.++|+.++ +. ..+..... .|.-.+ |..++.
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSH 332 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTE
T ss_pred CCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCE
Confidence 5554221111100111 1245666 889999877 4567888999875 44 44443332 222111 233455
Q ss_pred EEEEEEcC-----eEEEEecc
Q 016020 327 LFLTFRNR-----TVAVWNFR 342 (396)
Q Consensus 327 LFLTfs~g-----ti~iWd~~ 342 (396)
|+++-..+ .+-.+|+.
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETT
T ss_pred EEEEeCCCCCCCcEEEEEcCC
Confidence 54443222 45555665
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=89.60 E-value=21 Score=36.83 Aligned_cols=186 Identities=13% Similarity=0.190 Sum_probs=105.6
Q ss_pred ccchhhhhhccccceeeeccccceEEEecCCCCc----------eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 016020 97 ARDIVFALAHSGVCAAFSRETNRRICFLNVSPDE----------VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIE 166 (396)
Q Consensus 97 a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~e----------vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 166 (396)
+.+.|++.+..|.-.|+|..||+.+=...+.... +-+++-+. ++.|++.+ .| ..|.|--
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~---~d--g~l~alD---- 133 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGT---LD--GRLIALD---- 133 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEEC---TT--SEEEEEE----
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEc---CC--CEEEEEE----
Confidence 5788888888999999999999999877665432 12333332 23444322 12 2233321
Q ss_pred hhhhCCCCCCCcceeecc---------cCCCCeEEeeCCCCcEEEeecC-----CCeEEEEeccCceEEEEeccC-----
Q 016020 167 YIRRGKPDSGFALFESES---------LKWPGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISDK----- 227 (396)
Q Consensus 167 ~i~~gk~~~~~~LF~~~~---------l~~PgfVEFDd~NgkIlt~~a~-----d~~YrVwdlknYs~lysIs~~----- 227 (396)
.. .|..+.+... ...| .| + +|++++-... ++.+..||.++.+.+.+....
T Consensus 134 -~~-----tG~~~W~~~~~~~~~~~~~~~~P-~v--~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~ 202 (668)
T 1kv9_A 134 -AK-----TGKAIWSQQTTDPAKPYSITGAP-RV--V--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPA 202 (668)
T ss_dssp -TT-----TCCEEEEEECSCTTSSCBCCSCC-EE--E--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTT
T ss_pred -CC-----CCCEeeeeccCCCCCcceecCCC-EE--E--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCC
Confidence 11 2223333221 1122 12 1 4677765543 689999999999998887521
Q ss_pred c------------------e----------EEEEEcCCeEEEEEecCCCee------------------eeEEEEeecCc
Q 016020 228 H------------------V----------QEIKISPGIMLLIFNRSSSHV------------------PLKILSIEDGT 261 (396)
Q Consensus 228 ~------------------V----------qEIkiSpg~~Ll~~q~~~~~i------------------plkIl~IetG~ 261 (396)
. + ..+.+.|..-++.. ...+-- .+.-+|..||+
T Consensus 203 ~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~-~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~ 281 (668)
T 1kv9_A 203 LPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYV-GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK 281 (668)
T ss_dssp SCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC
T ss_pred ccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc
Confidence 0 0 11344432112111 121211 38888999999
Q ss_pred EEEEEEeecccC-------Cccchh--hhhcc---eeeEeecCCeeeEEEcccceEE
Q 016020 262 VLKVFYHLLHRN-------KKVDFI--EQFNE---KLLVKQENENLQILDVRNAELM 306 (396)
Q Consensus 262 ~l~s~~~~L~~s-------k~i~Fi--E~~~e---kLLIKQed~~L~I~Dv~~~ki~ 306 (396)
.+-.+... ++. .++-.. +..++ .|++...++.|-++|-.|++++
T Consensus 282 ~~W~~~~~-~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 282 LAWHYQVT-PGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEESS-TTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eeeEeecC-CCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 99877621 111 121111 11333 5888889999999999999988
No 271
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.85 E-value=20 Score=38.54 Aligned_cols=161 Identities=13% Similarity=0.161 Sum_probs=102.9
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC--CeEEEEEecCCCeeeeEEEEee
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP--GIMLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp--g~~Ll~~q~~~~~iplkIl~Ie 258 (396)
..+..|.=+-+|..++++...+...+.+.|.++.+-....-+.. .....|.+.| |.|.......+. .+...++
T Consensus 468 ~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~--~I~~~~~- 544 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPA--KIKKGGL- 544 (791)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSC--EEEEEET-
T ss_pred cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCC--eEEEEec-
Confidence 35789999999999999999999999999999987654444433 5678999976 555544433322 2344444
Q ss_pred cCcEEEEEEe-ecccCCccchhhhhcceeeEe-ecCCeeeEEEcccceEEEeccc--ccCCCceEEEeecCeEEEEEEc-
Q 016020 259 DGTVLKVFYH-LLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRT--EFMTPSAFIFLYENQLFLTFRN- 333 (396)
Q Consensus 259 tG~~l~s~~~-~L~~sk~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~t--~~~~PsAFiFly~~qLFLTfs~- 333 (396)
+|+....+.. .|..-.-|.+-. .+..|++- .....|..+|+..+....+..+ ....|.++- +.++.||+|=+.
T Consensus 545 dG~~~~~lv~~~l~~P~GLavD~-~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gla-v~~~~lYwtD~~~ 622 (791)
T 3m0c_C 545 NGVDIYSLVTENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-VFEDKVFWTDIIN 622 (791)
T ss_dssp TSCCEEEEECSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE-EETTEEEEEETTT
T ss_pred CCCceEEEEeCCCCCceEEEEec-CCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEE-EeCCEEEEEECCC
Confidence 4655544431 111111233222 35667665 4667899999876655555443 344565554 578899999876
Q ss_pred CeEEEEe-cccceeee
Q 016020 334 RTVAVWN-FRGELVTS 348 (396)
Q Consensus 334 gti~iWd-~~geL~t~ 348 (396)
+.|..-| +.|+.++.
T Consensus 623 ~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 623 EAIFSANRLTGSDVNL 638 (791)
T ss_dssp TEEEEEETTTCCCCEE
T ss_pred CEEEEEeCCCCcceEE
Confidence 7888777 56643333
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.43 E-value=23 Score=36.62 Aligned_cols=156 Identities=10% Similarity=0.142 Sum_probs=93.9
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--------CceEEEEEcC-CeEEEEEecCCCeeeeEEE
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--------KHVQEIKISP-GIMLLIFNRSSSHVPLKIL 255 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--------~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl 255 (396)
++.|--++||..+|+|--++...+.++.+++.+-...-.+.. .....+++-. +-.|.......+. +.+.
T Consensus 339 ~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~--I~v~ 416 (628)
T 4a0p_A 339 LRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNV--INVT 416 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTE--EEEE
T ss_pred cCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCE--EEEE
Confidence 455667899999999999888888888888765332111221 3566777764 3344444444443 3344
Q ss_pred EeecCcEEEEEEe-ecccCCccchhhhhcceeeEeecCC---eeeEEEcccceEEEecccccCCCceEEEeec-CeEEEE
Q 016020 256 SIEDGTVLKVFYH-LLHRNKKVDFIEQFNEKLLVKQENE---NLQILDVRNAELMEVSRTEFMTPSAFIFLYE-NQLFLT 330 (396)
Q Consensus 256 ~IetG~~l~s~~~-~L~~sk~i~FiE~~~ekLLIKQed~---~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~-~qLFLT 330 (396)
+. +|+....+.. .|.+-..|.+-+ ...+|++---+. .|.-.++--.....+-.+...+|....+-++ +.||++
T Consensus 417 ~~-~G~~~~~l~~~~l~~Pr~iavdp-~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~ 494 (628)
T 4a0p_A 417 RL-DGRSVGVVLKGEQDRPRAVVVNP-EKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWA 494 (628)
T ss_dssp ET-TSCEEEEEEECTTCCEEEEEEET-TTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EC-CCCeEEEEEeCCCCceeeEEEec-CCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEE
Confidence 44 5775554331 121112244333 356777654333 3555555433343343455778999988885 788988
Q ss_pred EEc-CeEEEEecccc
Q 016020 331 FRN-RTVAVWNFRGE 344 (396)
Q Consensus 331 fs~-gti~iWd~~ge 344 (396)
=+. +.|+..|++|.
T Consensus 495 D~~~~~I~~~~~dG~ 509 (628)
T 4a0p_A 495 DSDLRRIESSDLSGA 509 (628)
T ss_dssp ETTTTEEEEEETTSC
T ss_pred eCCCCEEEEEeCCCC
Confidence 765 89999999994
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=88.21 E-value=14 Score=33.16 Aligned_cols=180 Identities=14% Similarity=0.113 Sum_probs=96.8
Q ss_pred CCCeEEeeCCCCcEEEeecCCCe--EEEEeccCceE--EEEecc-CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCc
Q 016020 187 WPGFVEFDDVNGKVLTYSAQDSI--YKVFDLKNYTM--LYSISD-KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d~~--YrVwdlknYs~--lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
+|.-+-||+ +|++...+...+. +-.+|..+.+. +..+.. ..-..+.+.++-++++.....+ -+-.+|..+|+
T Consensus 73 ~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g--~i~~~d~~~~~ 149 (306)
T 2p4o_A 73 KVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRG--AIWLIDVVQPS 149 (306)
T ss_dssp EEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTT--EEEEEETTTTE
T ss_pred CceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCC--eEEEEeCCCCc
Confidence 477788887 6777776654322 44456666553 333332 2223344456666666664333 33344544442
Q ss_pred EEEE-EEeeccc-----C-CccchhhhhcceeeEee-cCCeeeEEEccc-ceEE--EecccccCCCceEEEeecCeEEEE
Q 016020 262 VLKV-FYHLLHR-----N-KKVDFIEQFNEKLLVKQ-ENENLQILDVRN-AELM--EVSRTEFMTPSAFIFLYENQLFLT 330 (396)
Q Consensus 262 ~l~s-~~~~L~~-----s-k~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~-~ki~--~v~~t~~~~PsAFiFly~~qLFLT 330 (396)
.... ..-.+.+ . ....=+-..+..|++-. .+..|..||+.. +++. ++. .....|..+.+-.+++||++
T Consensus 150 ~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 150 GSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTCCEEEE
T ss_pred EeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEE-eccCCCCCeEECCCCCEEEE
Confidence 2111 1100000 0 00111123456776665 456889999864 4321 111 12357999999999999999
Q ss_pred EEc-CeEEEEecccceee--eeccccccCCC--C-----CC-CcEEEccCCc
Q 016020 331 FRN-RTVAVWNFRGELVT--SFEDHLLWHPD--C-----NT-NNIYITSDQD 371 (396)
Q Consensus 331 fs~-gti~iWd~~geL~t--~fedh~l~~~~--c-----~~-n~~~it~~qd 371 (396)
-.. +.|.++|.+|++.+ .++... ..|. | ++ +.+|||..+.
T Consensus 229 ~~~~~~V~~~~~~G~~~~~~~~~~~~-~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 229 THIYNSVVRIAPDRSTTIIAQAEQGV-IGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CBTTCCEEEECTTCCEEEEECGGGTC-TTEEEEEECCSTTTTTEEEEEECTT
T ss_pred eCCCCeEEEECCCCCEEEEeeccccc-CCceEEEEecccCCCCEEEEECCCC
Confidence 876 89999999997643 444332 2222 1 33 5677776543
No 274
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=88.07 E-value=5 Score=38.37 Aligned_cols=132 Identities=14% Similarity=0.092 Sum_probs=81.9
Q ss_pred eEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccchhhhhcceeeEee-cCCeeeEEEcccceEEE
Q 016020 229 VQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELME 307 (396)
Q Consensus 229 VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~ 307 (396)
.|-+.++++ .|....+..+. +..+|++||+.+.++ |+..-.-+=+-..++.|++-- .++.+.+||..+.+++.
T Consensus 57 tqGL~~~~~-~Ly~stG~~g~--v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 57 TQGLVFHQG-HFFESTGHQGT--LRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEEEEETT-EEEEEETTTTE--EEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cceEEEECC-EEEEEcCCCCE--EEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 366666665 44555555444 999999999999988 344221000223456666654 57889999999999887
Q ss_pred ecccccCCCceEEEeecCeEEEEEEcCeEEEEeccc-ceeeeec--c--ccc---cCCCCCCCcEEEcc
Q 016020 308 VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRG-ELVTSFE--D--HLL---WHPDCNTNNIYITS 368 (396)
Q Consensus 308 v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~g-eL~t~fe--d--h~l---~~~~c~~n~~~it~ 368 (396)
.-+.. ..+.+.. ..++.||++=-+++|.++|.+. +.+.+++ + ... -...|.++.+|++.
T Consensus 131 ti~~~-~eGwGLt-~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv 197 (268)
T 3nok_A 131 TTRYS-GEGWGLC-YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI 197 (268)
T ss_dssp EEECS-SCCCCEE-EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred EEeCC-CceeEEe-cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE
Confidence 54432 2234444 2355677776568999999876 5444432 1 111 12236688888775
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=87.85 E-value=17 Score=33.81 Aligned_cols=161 Identities=14% Similarity=0.134 Sum_probs=102.9
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC--CeEEEEEecCCCeeeeEEEEee
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP--GIMLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp--g~~Ll~~q~~~~~iplkIl~Ie 258 (396)
..+..|.=+-+|..+|.+...+...+.+.++++.+-....-+.+ ..-..|++.| |.|......... -+..++.
T Consensus 76 ~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~--~I~r~~~- 152 (318)
T 3sov_A 76 SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVP--KIERAGM- 152 (318)
T ss_dssp ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSC--EEEEEET-
T ss_pred CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCC--EEEEEEc-
Confidence 34678999999999999999999999999999976433222322 5678888875 566554433211 1223332
Q ss_pred cCcEEEEEE-eecccCCccchhhhhcceeeEe-ecCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEEEEEc-Ce
Q 016020 259 DGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFLTFRN-RT 335 (396)
Q Consensus 259 tG~~l~s~~-~~L~~sk~i~FiE~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFLTfs~-gt 335 (396)
+|+....+. --+...+-|.|-+ .+..|++- .....|..+|+..+....+.......|.+..+ .++.+|.|=.. +.
T Consensus 153 dG~~~~~~~~~~l~~Pnglavd~-~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav-~~~~lywtd~~~~~ 230 (318)
T 3sov_A 153 DGSSRFIIINSEIYWPNGLTLDY-EEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL-FEDILYWTDWSTHS 230 (318)
T ss_dssp TSCSCEEEECSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE-ETTEEEEEETTTTE
T ss_pred CCCCeEEEEECCCCCccEEEEec-cCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE-eCCEEEEEecCCCe
Confidence 454433322 1122223355544 45666664 46778889998655544444456677887765 68899999655 79
Q ss_pred EEEEec-ccceeee
Q 016020 336 VAVWNF-RGELVTS 348 (396)
Q Consensus 336 i~iWd~-~geL~t~ 348 (396)
|..+|. .|+..+.
T Consensus 231 V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 231 ILACNKYTGEGLRE 244 (318)
T ss_dssp EEEEETTTCCSCEE
T ss_pred EEEEECCCCCceEE
Confidence 999998 5764443
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.36 E-value=2.7 Score=43.91 Aligned_cols=164 Identities=13% Similarity=0.157 Sum_probs=100.8
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC--CeEEEEEecCCCeeeeEEEEee
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP--GIMLLIFNRSSSHVPLKILSIE 258 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp--g~~Ll~~q~~~~~iplkIl~Ie 258 (396)
..+..|.-+-+|..+|++...+...+.+.|+++.+-....-+.. .....|++.| |.|.......+. -|..+++
T Consensus 450 ~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~--~I~~~~~- 526 (699)
T 1n7d_A 450 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPA--KIKKGGL- 526 (699)
T ss_dssp SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSC--CEEBCCS-
T ss_pred CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCC--eEEEEeC-
Confidence 34678999999988999999888899999999986544433432 4567788875 444433222211 2222332
Q ss_pred cCcEEEEEE-eecccCCccchhhhhcceeeEee-cCCeeeEEEcccceEEEecc--cccCCCceEEEeecCeEEEEEEc-
Q 016020 259 DGTVLKVFY-HLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNAELMEVSR--TEFMTPSAFIFLYENQLFLTFRN- 333 (396)
Q Consensus 259 tG~~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQ-ed~~L~I~Dv~~~ki~~v~~--t~~~~PsAFiFly~~qLFLTfs~- 333 (396)
+|+....+. ..|....-|.|-+ .+..|++-. ....|..+|+..+....+.. .....|.+..+ .++.||+|-..
T Consensus 527 dG~~~~~l~~~~l~~PnGlavd~-~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glav-d~~~lywtd~~~ 604 (699)
T 1n7d_A 527 NGVDIYSLVTENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIIN 604 (699)
T ss_dssp SSCCCCEESCSSCSSCCCEEECT-TTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEE-ETTEEEEECSTT
T ss_pred CCCCeeEEEeCCCCCccEEEEec-cCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEE-ECCEEEEEeCCC
Confidence 344333321 1123333455554 456666554 66789999987655554433 34566777765 56689988866
Q ss_pred CeEEEEec-ccceeeeecc
Q 016020 334 RTVAVWNF-RGELVTSFED 351 (396)
Q Consensus 334 gti~iWd~-~geL~t~fed 351 (396)
+.|..+|. .|+.++.+..
T Consensus 605 ~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 605 EAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp TCEEEEETTTEEEEECCCT
T ss_pred CeEEEEEccCCCceEEeec
Confidence 79999986 5776666644
No 277
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=86.98 E-value=6.9 Score=40.19 Aligned_cols=142 Identities=13% Similarity=0.129 Sum_probs=89.4
Q ss_pred CcEEEeecCCCeEEEEeccCc----eEEEEeccC---------ceEEEEEcCCe-EEEEEecCC--CeeeeEEEEeecCc
Q 016020 198 GKVLTYSAQDSIYKVFDLKNY----TMLYSISDK---------HVQEIKISPGI-MLLIFNRSS--SHVPLKILSIEDGT 261 (396)
Q Consensus 198 gkIlt~~a~d~~YrVwdlknY----s~lysIs~~---------~VqEIkiSpg~-~Ll~~q~~~--~~iplkIl~IetG~ 261 (396)
-+.+..+..++.+-|+|.++. +....|..+ .-+.+..+|+= |+-.+..+. ..--+-++|.+|++
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 344555666788999999866 788888532 33557788664 332222211 22568999999999
Q ss_pred EEEEEEeecccCC---ccch--hhhhcceeeEe-------------------ecCCeeeEEEcccceEEEeccc--ccCC
Q 016020 262 VLKVFYHLLHRNK---KVDF--IEQFNEKLLVK-------------------QENENLQILDVRNAELMEVSRT--EFMT 315 (396)
Q Consensus 262 ~l~s~~~~L~~sk---~i~F--iE~~~ekLLIK-------------------Qed~~L~I~Dv~~~ki~~v~~t--~~~~ 315 (396)
.+..... .+.. ..+| .+ .++.+++- +.+..|.+||+.+++++.+... ....
T Consensus 176 v~~~~~~--~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 176 PLGKWEI--DRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp EEEECCS--BCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred EEEEEcc--CCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 9997652 2211 1223 34 34455554 3589999999999987764333 2345
Q ss_pred CceEEE--eecCe-EEEEEE-----c-CeEEEEecc
Q 016020 316 PSAFIF--LYENQ-LFLTFR-----N-RTVAVWNFR 342 (396)
Q Consensus 316 PsAFiF--ly~~q-LFLTfs-----~-gti~iWd~~ 342 (396)
|+...| .++++ .|++-. - ++|.+|..+
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 776656 76665 476665 3 677776554
No 278
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=86.41 E-value=5.4 Score=42.15 Aligned_cols=173 Identities=10% Similarity=0.147 Sum_probs=114.8
Q ss_pred CCeEEEEeccCceEEEEecc-CceEEEEEcC-CeEEEEEecCCCe-----------------------------------
Q 016020 207 DSIYKVFDLKNYTMLYSISD-KHVQEIKISP-GIMLLIFNRSSSH----------------------------------- 249 (396)
Q Consensus 207 d~~YrVwdlknYs~lysIs~-~~VqEIkiSp-g~~Ll~~q~~~~~----------------------------------- 249 (396)
++.+.|.|..+.+.+.+|.= .+-.-+.+|| |-.+.+.....+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 56788999999988888773 3556667774 4455455544311
Q ss_pred eeeEEEEeec--CcE-EEEEEeecccC-CccchhhhhcceeeEeec-CCeeeEEEcccce------------EEEecccc
Q 016020 250 VPLKILSIED--GTV-LKVFYHLLHRN-KKVDFIEQFNEKLLVKQE-NENLQILDVRNAE------------LMEVSRTE 312 (396)
Q Consensus 250 iplkIl~Iet--G~~-l~s~~~~L~~s-k~i~FiE~~~ekLLIKQe-d~~L~I~Dv~~~k------------i~~v~~t~ 312 (396)
--+.++|..+ |+. +..+.. +.+ --+.|.+ +|.++++--+ ...+-+||+.+.+ +.. -...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv--g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~v~v 329 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI--ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-EPEL 329 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE--ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-CCBC
T ss_pred CcEEEEeCcccCCceeEEEEec--CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-EcCC
Confidence 1378888888 655 444431 211 1288888 9999999875 4569999999864 222 2244
Q ss_pred cCCCceEEEeecCeEEEEEEc-CeEEEEeccc-----------ceeeeeccccccCCCCCCCcEEEccCCcEEEEeccCC
Q 016020 313 FMTPSAFIFLYENQLFLTFRN-RTVAVWNFRG-----------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAE 380 (396)
Q Consensus 313 ~~~PsAFiFly~~qLFLTfs~-gti~iWd~~g-----------eL~t~fedh~l~~~~c~~n~~~it~~qd~ii~~~~~~ 380 (396)
.--|.-..|.+++.+|+|.-- ++|.+||.+. +.+..++-|+-.-.+|-.--+-++.|...+++-||-+
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCC
Confidence 567999999999988887655 8999999876 3566676665331122222233567777888888876
Q ss_pred CCC
Q 016020 381 PED 383 (396)
Q Consensus 381 ~~~ 383 (396)
.+.
T Consensus 410 kdr 412 (595)
T 1fwx_A 410 KDR 412 (595)
T ss_dssp TTS
T ss_pred ccc
Confidence 543
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.40 E-value=27 Score=34.56 Aligned_cols=149 Identities=12% Similarity=0.267 Sum_probs=85.6
Q ss_pred EEEeecC--CCeEEEEecc-CceEEEEecc---------CceEEEEE--cC--C-eEEEEEecCCCeeeeEEEEeecCcE
Q 016020 200 VLTYSAQ--DSIYKVFDLK-NYTMLYSISD---------KHVQEIKI--SP--G-IMLLIFNRSSSHVPLKILSIEDGTV 262 (396)
Q Consensus 200 Ilt~~a~--d~~YrVwdlk-nYs~lysIs~---------~~VqEIki--Sp--g-~~Ll~~q~~~~~iplkIl~IetG~~ 262 (396)
+++.+-. +...+||++- ....|..|.+ ..+.-+-+ +| | ..+++........-..|.+-.+|+.
T Consensus 89 a~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 89 AAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI 168 (355)
T ss_dssp EEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE
T ss_pred EEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc
Confidence 3455555 6789999773 2334777732 44445666 54 3 3455555553222333333344544
Q ss_pred EEEEE--eecccCCccchhhh--hcceeeEeecCCeeeEEEcc-----cceEEE-ecccccC-CCceEEEeecC--e--E
Q 016020 263 LKVFY--HLLHRNKKVDFIEQ--FNEKLLVKQENENLQILDVR-----NAELME-VSRTEFM-TPSAFIFLYEN--Q--L 327 (396)
Q Consensus 263 l~s~~--~~L~~sk~i~FiE~--~~ekLLIKQed~~L~I~Dv~-----~~ki~~-v~~t~~~-~PsAFiFly~~--q--L 327 (396)
...+. +.|+. .++++-. -...|++.+|+..|--||.. +++++- +.-++.. .|......+.. + |
T Consensus 169 ~~~lVR~f~lgs--q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 169 SGKKVRAFKMNS--QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEEEECSS--CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred cceEEEEecCCC--CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 44332 22443 4555554 46899999999888888866 455554 3333333 57776655442 2 3
Q ss_pred EEEEE-cCeEEEEeccc--ceeeeec
Q 016020 328 FLTFR-NRTVAVWNFRG--ELVTSFE 350 (396)
Q Consensus 328 FLTfs-~gti~iWd~~g--eL~t~fe 350 (396)
|++-. +++..+||.++ +.+++|.
T Consensus 247 ivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 247 MASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 33332 37999999985 6888883
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.39 E-value=12 Score=37.21 Aligned_cols=147 Identities=18% Similarity=0.292 Sum_probs=89.3
Q ss_pred eCCCCcEEEeecCCCeEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccC
Q 016020 194 DDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRN 273 (396)
Q Consensus 194 Dd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~s 273 (396)
|+....||+.+-. +-..|+|| +.+.|-.+.+-.+.-|-+-||..| .|+. ..+.
T Consensus 37 dp~~s~ii~t~k~-~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l------------------~g~~-~dla------ 89 (355)
T 3amr_A 37 TPQNSKLITTNKK-SGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPL------------------NGKK-VDIA------ 89 (355)
T ss_dssp CGGGCEEEEEETT-TEEEEEET-TSCEEEEECCSCEEEEEEEEEEEE------------------TTEE-EEEE------
T ss_pred CCCccEEEEEcCC-CCEEEEcC-CCcEEEEccCCCcccEEEeccccc------------------CCce-EeEE------
Confidence 5555667766554 56889999 888888887666666666666543 2222 1111
Q ss_pred CccchhhhhcceeeEeec--CCeeeEEEc--ccceEEEecc------cccCCCceEEEe--e-cCe--EEEEEEcCeEEE
Q 016020 274 KKVDFIEQFNEKLLVKQE--NENLQILDV--RNAELMEVSR------TEFMTPSAFIFL--Y-ENQ--LFLTFRNRTVAV 338 (396)
Q Consensus 274 k~i~FiE~~~ekLLIKQe--d~~L~I~Dv--~~~ki~~v~~------t~~~~PsAFiFl--y-~~q--LFLTfs~gti~i 338 (396)
...-+. +..|.+|++ .++++..+.. +....|..+-+. + +++ +|++=.+|.++.
T Consensus 90 ------------~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q 157 (355)
T 3amr_A 90 ------------AASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQ 157 (355)
T ss_dssp ------------EEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEE
T ss_pred ------------EEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEE
Confidence 112234 577888866 6677777732 444788887773 3 344 455555599999
Q ss_pred Eec--------ccceeeeeccccccCCC-CC----CCcEEEccCCcEEEEeccCCCC
Q 016020 339 WNF--------RGELVTSFEDHLLWHPD-CN----TNNIYITSDQDLIISYCKAEPE 382 (396)
Q Consensus 339 Wd~--------~geL~t~fedh~l~~~~-c~----~n~~~it~~qd~ii~~~~~~~~ 382 (396)
|++ .+++|.+|+-- ..+. |. ++.+||+...-= |--..++++
T Consensus 158 ~~l~~~~~g~~~~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~ 211 (355)
T 3amr_A 158 YELKADKNGYISGKKVRAFKMN--SQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPD 211 (355)
T ss_dssp EEEEECTTSCEEEEEEEEEECS--SCEEEEEEETTTTEEEEEETTTE-EEEEECSTT
T ss_pred EEEEeCCCCcccceEEEEecCC--CCcceEEEcCCCCeEEEecccce-EEEEeCCcC
Confidence 998 22577776642 2222 54 468898876644 444444443
No 281
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=85.13 E-value=4.8 Score=41.33 Aligned_cols=151 Identities=6% Similarity=-0.007 Sum_probs=91.2
Q ss_pred CCCeEEeeCCCCcEEEeecCC------CeEEEEeccCceEEEEeccC-c----eEEEEEcCCeEEEEEecC---------
Q 016020 187 WPGFVEFDDVNGKVLTYSAQD------SIYKVFDLKNYTMLYSISDK-H----VQEIKISPGIMLLIFNRS--------- 246 (396)
Q Consensus 187 ~PgfVEFDd~NgkIlt~~a~d------~~YrVwdlknYs~lysIs~~-~----VqEIkiSpg~~Ll~~q~~--------- 246 (396)
+|-=+-.-+ +| +......+ +.+-|.|.++.+.+=.+... . --++.++|+.-.|+...=
T Consensus 139 ~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 139 RLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDG 216 (462)
T ss_dssp EEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTC
T ss_pred cccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccc
Confidence 444444444 55 44433333 57888888888888777631 1 125778888776666630
Q ss_pred --------CCeeeeEEEEeecCcEEEEEEeeccc--C--Cccch--hhhhcceeeEeec-----C-Ceee----------
Q 016020 247 --------SSHVPLKILSIEDGTVLKVFYHLLHR--N--KKVDF--IEQFNEKLLVKQE-----N-ENLQ---------- 296 (396)
Q Consensus 247 --------~~~iplkIl~IetG~~l~s~~~~L~~--s--k~i~F--iE~~~ekLLIKQe-----d-~~L~---------- 296 (396)
...=.+.+||+++++.+.++. ++. . .+|.| -+ .+.+.++-.| . +++-
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~--vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~ 293 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLT--LGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWN 293 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEEE--SCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEE
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEEe--cCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCcee
Confidence 123568999999998888766 221 1 12444 44 6778887776 3 3553
Q ss_pred ---EEEcccceEEEecc-c------ccCCCceEEEeecCe-EEEEEEc-CeEEEEecc
Q 016020 297 ---ILDVRNAELMEVSR-T------EFMTPSAFIFLYENQ-LFLTFRN-RTVAVWNFR 342 (396)
Q Consensus 297 ---I~Dv~~~ki~~v~~-t------~~~~PsAFiFly~~q-LFLTfs~-gti~iWd~~ 342 (396)
++|+.+.+.....+ . ....|++..++++++ ||++-+. ++|.++|..
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 44444433222111 0 035689999998765 5666665 899999984
No 282
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=84.86 E-value=24 Score=36.57 Aligned_cols=155 Identities=9% Similarity=0.088 Sum_probs=95.5
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEecc--CceEEEEEcC-CeEEEEEecCCCeeeeEEEEeecCc
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KHVQEIKISP-GIMLLIFNRSSSHVPLKILSIEDGT 261 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs~--~~VqEIkiSp-g~~Ll~~q~~~~~iplkIl~IetG~ 261 (396)
++.|-=++||...|++--.+..++.+..+++.+-...-.+.. .....|++.+ +-.|.+.....+ -+.+++.. |+
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~--~I~v~~~d-G~ 112 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTN--RIEVSKLD-GQ 112 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT--EEEEEETT-ST
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCC--EEEEEecC-CC
Confidence 567888999999999999999999999999876533333332 3456677652 222333333322 33444443 43
Q ss_pred EEEEEE-eecccCCccchhhhhcceeeEeec--CCeeeEEEcccceEEEecccccCCCceEEEee-cCeEEEEEEc-CeE
Q 016020 262 VLKVFY-HLLHRNKKVDFIEQFNEKLLVKQE--NENLQILDVRNAELMEVSRTEFMTPSAFIFLY-ENQLFLTFRN-RTV 336 (396)
Q Consensus 262 ~l~s~~-~~L~~sk~i~FiE~~~ekLLIKQe--d~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly-~~qLFLTfs~-gti 336 (396)
....+. .-|..-..|.+-+ .+.+|++-.- +..|...|+.-.....+ -+...+|.+..+-+ ++.||++=.. +.|
T Consensus 113 ~~~~l~~~~l~~P~~iavdp-~~G~lY~tD~g~~~~I~r~~~dG~~~~~l-~~~~~~P~GlalD~~~~~LY~aD~~~~~I 190 (628)
T 4a0p_A 113 HRQVLVWKDLDSPRALALDP-AEGFMYWTEWGGKPKIDRAAMDGSERTTL-VPNVGRANGLTIDYAKRRLYWTDLDTNLI 190 (628)
T ss_dssp TCEEEECSSCCCEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCSCEEE-ECSCSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred cEEEEEeCCCCCcccEEEcc-CCCeEEEeCCCCCCEEEEEeCCCCceEEE-ECCCCCcceEEEccccCEEEEEECCCCEE
Confidence 322221 1111112233322 3668888764 45666677655544433 25678999999988 5788988776 899
Q ss_pred EEEecccc
Q 016020 337 AVWNFRGE 344 (396)
Q Consensus 337 ~iWd~~ge 344 (396)
...|.+|.
T Consensus 191 ~~~d~dG~ 198 (628)
T 4a0p_A 191 ESSNMLGL 198 (628)
T ss_dssp EEEETTSC
T ss_pred EEEcCCCC
Confidence 99999993
No 283
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=81.39 E-value=52 Score=33.81 Aligned_cols=231 Identities=10% Similarity=0.103 Sum_probs=124.6
Q ss_pred cceEEEeec-cchhhhhhccccceeeeccccceEEEecCCCCc--eEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 89 TKVIEIVAA-RDIVFALAHSGVCAAFSRETNRRICFLNVSPDE--VIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 89 S~V~EIv~a-~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~e--vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
..|..|... +..|-+-+..|+ ..||..++++.-+....... .|.+|+..+.. .|.+ +.. .+|.+....
T Consensus 88 n~I~~i~~d~~g~lWigT~~Gl-~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g-~lwi-~t~-----~gl~~~~~~- 158 (795)
T 4a2l_A 88 DISRIVKTDSQGRVWIGTRDGL-SRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPE-QLLI-STP-----EGLIMFDIK- 158 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSCE-EEEETTTTEEEEECCEETTEECCCCEEEEEETT-EEEE-EET-----TEEEEEETT-
T ss_pred cceeEEEECCCCCEEEEeCCch-heeCCCCCeEEeccccccCCCceEEEEEECCCC-CEEE-EEC-----CceEEEECC-
Confidence 457777665 567888888998 57898888877654322211 27788776533 3333 221 234333211
Q ss_pred hhhhhCCCCCCCcceee-cccCC-CCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEE---eccCceEEEEEc-CCeE
Q 016020 166 EYIRRGKPDSGFALFES-ESLKW-PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS---ISDKHVQEIKIS-PGIM 239 (396)
Q Consensus 166 ~~i~~gk~~~~~~LF~~-~~l~~-PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lys---Is~~~VqEIkiS-pg~~ 239 (396)
.+++ ..+.. ..... .--+-.|. +|++.......+.| .||.++.++..- .....|..|... .|.+
T Consensus 159 ----~~~~----~~~~~~~~~~~~i~~i~~d~-~g~lwigt~~~Gl~-~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 228 (795)
T 4a2l_A 159 ----ESKF----IDDSFSTAMHKTIASTLYRQ-GDQIYIGTSTDGLY-TYSITQKTFEKVIPILGTKQIQAILQQSPTRI 228 (795)
T ss_dssp ----TTEE----ECSSSCHHHHTCCEEEEEEE-TTEEEEEESSSCEE-EEETTTCCEEECC----CCCEEEEEEEETTEE
T ss_pred ----CCEE----EeccCCCCCCcceEEEEECC-CCCEEEEECCCCEE-EEeCCCCeEEEecCCCCCCeeEEEEEcCCCCE
Confidence 1110 00000 00000 12344454 57776654444544 567666553321 123567776654 4444
Q ss_pred EEEEecCCCeeeeEEEEeecCcEEEEEEeec-----ccCCccch-hhhhcceeeEeecCCeeeEEEcccceEEEecccc-
Q 016020 240 LLIFNRSSSHVPLKILSIEDGTVLKVFYHLL-----HRNKKVDF-IEQFNEKLLVKQENENLQILDVRNAELMEVSRTE- 312 (396)
Q Consensus 240 Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L-----~~sk~i~F-iE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~- 312 (396)
. +....+ -|.+++..+++... +.+.. ..+..|.- .+--...|.|.-.+ -|.+||..+++........
T Consensus 229 w-igt~~~---Gl~~~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~ 302 (795)
T 4a2l_A 229 W-VATEGA---GLFLINPKTKEIKN-YLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPV 302 (795)
T ss_dssp E-EEEBSS---CEEEEETTTTEEEE-ECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTT
T ss_pred E-EEECCC---CeEEEeCCCCeEEE-eecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCC
Confidence 3 332221 15667776665332 22110 01122322 23336678888877 7999999999888764332
Q ss_pred ------cCCCceEEEeecCeEEEEEEcCeEEEEecccc
Q 016020 313 ------FMTPSAFIFLYENQLFLTFRNRTVAVWNFRGE 344 (396)
Q Consensus 313 ------~~~PsAFiFly~~qLFLTfs~gti~iWd~~ge 344 (396)
.....+...-.++.|++.-.++-+..|+.+..
T Consensus 303 ~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 303 ENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN 340 (795)
T ss_dssp STTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG
T ss_pred CCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc
Confidence 13345555566889999887788888987764
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=78.24 E-value=41 Score=32.74 Aligned_cols=218 Identities=11% Similarity=0.070 Sum_probs=117.1
Q ss_pred ccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCC
Q 016020 108 GVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFALFESESLKW 187 (396)
Q Consensus 108 G~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~ 187 (396)
+.-..+|..+|+..-++- ...-...|-+....+ |+++....... -+. .+. ....+....+. .+ ..+.+
T Consensus 162 ~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~~~---~~g-v~~--~~~~~~~~~~~-~~--~~~~~ 229 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSSDT---NTG-IYL--FTRASGFTERL-SL--CNARG 229 (433)
T ss_dssp SCEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSCTT---SEE-EEE--ECGGGTTCCEE-EE--EECSS
T ss_pred CCEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCCcc---cce-EEE--EECCCCeeccc-cc--cccCC
Confidence 556667766666555433 334466777776666 44432111000 000 010 11122221111 22 25889
Q ss_pred CCeEEeeCCCCcEEEeecCCCeEEEEeccCceE---EEEeccC-ceEEEEEcCCe-EEEEEecCCCeeeeEEEEee--cC
Q 016020 188 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSISDK-HVQEIKISPGI-MLLIFNRSSSHVPLKILSIE--DG 260 (396)
Q Consensus 188 PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~---lysIs~~-~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~Ie--tG 260 (396)
|.-+-+|+.+|.+...+..++.+.++|..+.+. ++..... .-.-|.++|.- .|.+....++.| ..++.. +|
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I--~~~~~d~~~~ 307 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI--YRVDYNRETG 307 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE--EEEEBCTTTC
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE--EEEeCCCCCc
Confidence 999999998999998888899999999987654 4433331 12248888643 355555544433 333332 34
Q ss_pred cEE--EEEEe---------------ecccCCccchh--------hhhcceeeEe-ecCCeeeEEEcccceEEEec-----
Q 016020 261 TVL--KVFYH---------------LLHRNKKVDFI--------EQFNEKLLVK-QENENLQILDVRNAELMEVS----- 309 (396)
Q Consensus 261 ~~l--~s~~~---------------~L~~sk~i~Fi--------E~~~ekLLIK-Qed~~L~I~Dv~~~ki~~v~----- 309 (396)
+.. ..+.- .|.+-.-+.|. . .+..|++- ..++.|+.+|- ++++..+.
T Consensus 308 ~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~ 385 (433)
T 4hw6_A 308 KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNS 385 (433)
T ss_dssp CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECT-TSEEEEEECCCTT
T ss_pred ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCC
Confidence 221 11110 00011114441 1 23344444 46788888884 67666542
Q ss_pred ------------ccccCCCceEEEe-ecCeEEEEEEc-CeEEEEec
Q 016020 310 ------------RTEFMTPSAFIFL-YENQLFLTFRN-RTVAVWNF 341 (396)
Q Consensus 310 ------------~t~~~~PsAFiFl-y~~qLFLTfs~-gti~iWd~ 341 (396)
.+.+..|....+. .++.||++=+. +.|...+.
T Consensus 386 ~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 386 REWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 1246678888887 78888888665 56666554
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=76.05 E-value=59 Score=31.48 Aligned_cols=228 Identities=13% Similarity=0.125 Sum_probs=120.7
Q ss_pred hhhhhhccccceeeeccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcc
Q 016020 100 IVFALAHSGVCAAFSRETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKIEYIRRGKPDSGFAL 179 (396)
Q Consensus 100 ii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~L 179 (396)
.|++....+.-..||..+++.. .+.. ...--+.|=+....+.|+++. +.... +.-+... ..+.|.+.....+
T Consensus 151 ~Lyv~d~~~~I~~id~~~~~v~-~~~~-~~~~P~~ia~d~~G~~lyvad-~~~~~---~~~~v~~--~~~~g~~~~~~~l 222 (430)
T 3tc9_A 151 HLYLVGEQHPTRLIDFEKEYVS-TVYS-GLSKVRTICWTHEADSMIITN-DQNNN---DRPNNYI--LTRESGFKVITEL 222 (430)
T ss_dssp EEEEEEBTEEEEEEETTTTEEE-EEEC-CCSCEEEEEECTTSSEEEEEE-CCSCT---TSEEEEE--EEGGGTSCSEEEE
T ss_pred eEEEEeCCCcEEEEECCCCEEE-EEec-CCCCcceEEEeCCCCEEEEEe-CCCCc---ccceEEE--EeCCCceeeeeee
Confidence 3333333355566776655433 3333 333455566666555555533 21111 1111111 1123443221222
Q ss_pred eeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceE--EEEecc-CceEEEEEcCCe-EEEEEecCCCeeeeEEE
Q 016020 180 FESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISD-KHVQEIKISPGI-MLLIFNRSSSHVPLKIL 255 (396)
Q Consensus 180 F~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~--lysIs~-~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl 255 (396)
..+.+|-.+-+|+.+|.+...+..++.+.+||+.+... +..+.+ ..-.-|.++|.- .|.+.....+.| ..+
T Consensus 223 ---~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I--~~~ 297 (430)
T 3tc9_A 223 ---TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI--LRS 297 (430)
T ss_dssp ---EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE--EEE
T ss_pred ---ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE--EEE
Confidence 24789999999999999999999999999999987764 444443 235568888643 355555444333 333
Q ss_pred Eee--cCcE--EEEEEeeccc-------CCccchhhhh---------------cceeeEe-ecCCeeeEEEcccceEEEe
Q 016020 256 SIE--DGTV--LKVFYHLLHR-------NKKVDFIEQF---------------NEKLLVK-QENENLQILDVRNAELMEV 308 (396)
Q Consensus 256 ~Ie--tG~~--l~s~~~~L~~-------sk~i~FiE~~---------------~ekLLIK-Qed~~L~I~Dv~~~ki~~v 308 (396)
+.. +|+. ...+.-.... ....+|.... ...|++- ..++.|+.+| .++++..+
T Consensus 298 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~ 376 (430)
T 3tc9_A 298 DYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTF 376 (430)
T ss_dssp EEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEE
T ss_pred eCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEE
Confidence 333 2321 1111100000 0011222222 1234444 4677888888 56766654
Q ss_pred cc-----------------cccCCCceEEEee-cCeEEEEEEc-CeEEEEec
Q 016020 309 SR-----------------TEFMTPSAFIFLY-ENQLFLTFRN-RTVAVWNF 341 (396)
Q Consensus 309 ~~-----------------t~~~~PsAFiFly-~~qLFLTfs~-gti~iWd~ 341 (396)
.- +.+..|..+.+.+ ++.||++=+. +.|...+.
T Consensus 377 ~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 377 AGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 31 1366899999988 6889988655 56666554
No 286
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=73.46 E-value=85 Score=32.11 Aligned_cols=143 Identities=10% Similarity=0.079 Sum_probs=77.7
Q ss_pred EeccCceEEEEEc-CCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe-ecccCCcc-chhhhhcceeeEeecCCeeeEEE
Q 016020 223 SISDKHVQEIKIS-PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH-LLHRNKKV-DFIEQFNEKLLVKQENENLQILD 299 (396)
Q Consensus 223 sIs~~~VqEIkiS-pg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~-~L~~sk~i-~FiE~~~ekLLIKQed~~L~I~D 299 (396)
.++...|..|... +|.+. +-... --|..++.++|+... +.. .+ ....| .+.|--...|.+.-. .-|..||
T Consensus 403 ~~~~~~v~~i~~d~~g~lW-igt~~---~Gl~~~~~~~~~~~~-~~~~~~-~~~~v~~i~~d~~g~lwigt~-~Gl~~~~ 475 (781)
T 3v9f_A 403 ELLSNSVLCSLKDSEGNLW-FGTYL---GNISYYNTRLKKFQI-IELEKN-ELLDVRVFYEDKNKKIWIGTH-AGVFVID 475 (781)
T ss_dssp -CCCSBEEEEEECTTSCEE-EEETT---EEEEEECSSSCEEEE-CCSTTT-CCCCEEEEEECTTSEEEEEET-TEEEEEE
T ss_pred CCCCcceEEEEECCCCCEE-EEecc---CCEEEEcCCCCcEEE-eccCCC-CCCeEEEEEECCCCCEEEEEC-CceEEEe
Confidence 3455667777665 44433 32211 235556666654221 110 01 11222 233434567888887 5799999
Q ss_pred cccceEEEecccc-----cCCCceEEEeecCeEEEEEEcCeEEEEecccceeeeecc-ccccCCC------CCCCcEEEc
Q 016020 300 VRNAELMEVSRTE-----FMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFED-HLLWHPD------CNTNNIYIT 367 (396)
Q Consensus 300 v~~~ki~~v~~t~-----~~~PsAFiFly~~qLFLTfs~gti~iWd~~geL~t~fed-h~l~~~~------c~~n~~~it 367 (396)
..+++........ ...+.+...-.++.|++.-..+-+-.||.++...+.+.. +-+.... -.+++++|+
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 476 LASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp SSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred CCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 9998876654332 344555556668899998875446668887754554432 1111110 246677777
Q ss_pred cCCcE
Q 016020 368 SDQDL 372 (396)
Q Consensus 368 ~~qd~ 372 (396)
...-|
T Consensus 556 T~~Gl 560 (781)
T 3v9f_A 556 TGEGL 560 (781)
T ss_dssp ETTEE
T ss_pred ECCCc
Confidence 66444
No 287
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=66.72 E-value=26 Score=33.20 Aligned_cols=65 Identities=12% Similarity=0.084 Sum_probs=44.2
Q ss_pred cchhhhhcceeeEeecCCeeeEEEcccceEEEec-----ccccCCCceEEEeec----CeEEEEEEc--------CeEEE
Q 016020 276 VDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-----RTEFMTPSAFIFLYE----NQLFLTFRN--------RTVAV 338 (396)
Q Consensus 276 i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~-----~t~~~~PsAFiFly~----~qLFLTfs~--------gti~i 338 (396)
|.|.+ .+. |++-..++.|.++| .+++ ..+. .....-|....|.++ +.||++-+. +.|..
T Consensus 34 ia~~p-dG~-l~V~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 34 IAPLG-GGR-YLVTERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEE-TTE-EEEEETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred EEEcC-CCe-EEEEeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 56666 444 77777778888887 5565 3221 122345778888886 899999884 67888
Q ss_pred Eecccc
Q 016020 339 WNFRGE 344 (396)
Q Consensus 339 Wd~~ge 344 (396)
|+.++.
T Consensus 110 ~~~~~~ 115 (354)
T 3a9g_A 110 GRLDGS 115 (354)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 887764
No 288
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=64.19 E-value=1.4e+02 Score=30.97 Aligned_cols=149 Identities=15% Similarity=0.178 Sum_probs=81.1
Q ss_pred CeEEeeCCCCcEEEeecCCC-----eEEEEeccCc----eEEEEeccC-ceEEEEEcCC-eEEEEEecCCCeeeeEEEEe
Q 016020 189 GFVEFDDVNGKVLTYSAQDS-----IYKVFDLKNY----TMLYSISDK-HVQEIKISPG-IMLLIFNRSSSHVPLKILSI 257 (396)
Q Consensus 189 gfVEFDd~NgkIlt~~a~d~-----~YrVwdlknY----s~lysIs~~-~VqEIkiSpg-~~Ll~~q~~~~~iplkIl~I 257 (396)
+-+.|.+ .|+-++|...+. .+.++++.+- ..+|.-.+. ....+.+||+ -.|++....+..--+-++++
T Consensus 224 ~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 224 GEIVWGP-DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp SCCEECS-STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred eeEEEec-CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 4466776 677777776652 4555666554 267765553 3567889965 45555554555567778899
Q ss_pred ecCcEEEEEEeecccCCccchhh--hhcceeeEeecC---C--eeeEEEccc-ceEEE--ecccccCCCceEEEeecCeE
Q 016020 258 EDGTVLKVFYHLLHRNKKVDFIE--QFNEKLLVKQEN---E--NLQILDVRN-AELME--VSRTEFMTPSAFIFLYENQL 327 (396)
Q Consensus 258 etG~~l~s~~~~L~~sk~i~FiE--~~~ekLLIKQed---~--~L~I~Dv~~-~ki~~--v~~t~~~~PsAFiFly~~qL 327 (396)
.+|+....+..++.+.....|.. ..++.|++..+. . .|-.+|+.+ ++... ++.........+-+. .+.|
T Consensus 303 ~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~l 381 (751)
T 2xe4_A 303 RKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYL 381 (751)
T ss_dssp SSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEE
T ss_pred CCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEE
Confidence 88731111122334444444443 237888776543 2 555667665 33222 222222223334333 5677
Q ss_pred EEEEEc-CeEEEE
Q 016020 328 FLTFRN-RTVAVW 339 (396)
Q Consensus 328 FLTfs~-gti~iW 339 (396)
+++.+. |...+|
T Consensus 382 v~~~~~~g~~~l~ 394 (751)
T 2xe4_A 382 VVAGRRAGLTRIW 394 (751)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEeCCEEEEE
Confidence 776665 655544
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=60.25 E-value=42 Score=31.48 Aligned_cols=90 Identities=10% Similarity=0.107 Sum_probs=57.0
Q ss_pred ccchhhhhcceeeEeecCCeeeEEEcccceEEEec-----ccccCCCceEEEeec----CeEEEEEEc------CeEEEE
Q 016020 275 KVDFIEQFNEKLLVKQENENLQILDVRNAELMEVS-----RTEFMTPSAFIFLYE----NQLFLTFRN------RTVAVW 339 (396)
Q Consensus 275 ~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~-----~t~~~~PsAFiFly~----~qLFLTfs~------gti~iW 339 (396)
.|.|.+ .+. |++-..++.|.++| +++...+. ......|....|.++ +.||++-+. +.|..|
T Consensus 35 ~ia~~p-dG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 35 ALAFLP-DGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEECT-TSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred EEEEcC-CCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 366776 554 77777778899998 55543321 222457888899887 789999885 678888
Q ss_pred ecccc-------eeeeec-----cccccCCC-CCCCcEEEcc
Q 016020 340 NFRGE-------LVTSFE-----DHLLWHPD-CNTNNIYITS 368 (396)
Q Consensus 340 d~~ge-------L~t~fe-----dh~l~~~~-c~~n~~~it~ 368 (396)
+..+. +++.+. .|.+...- -+++++|||.
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 88752 333333 12221111 5678888874
No 290
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=58.04 E-value=1.7e+02 Score=29.97 Aligned_cols=143 Identities=12% Similarity=0.120 Sum_probs=77.8
Q ss_pred CCcEEEeecCCCeEEEEeccCceEEE--------EeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe
Q 016020 197 NGKVLTYSAQDSIYKVFDLKNYTMLY--------SISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH 268 (396)
Q Consensus 197 NgkIlt~~a~d~~YrVwdlknYs~ly--------sIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~ 268 (396)
+|.+..... ++ ..+||.++.++.. .++...|..|...+.-.|.+... + -|..++..+++. .+..
T Consensus 462 ~g~lwigt~-~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~---Gl~~~~~~~~~~--~~~~ 533 (795)
T 4a2l_A 462 EGNLWLGTL-SA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E---GLSVFKQEGLDI--QKAS 533 (795)
T ss_dssp SSCEEEEES-SC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S---CEEEEEEETTEE--EECC
T ss_pred CCCEEEEec-Cc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C---ceEEEeCCCCeE--EEec
Confidence 444443333 33 3346666654321 12235677776654333333333 2 366788887765 2221
Q ss_pred -----ecccCCccc-hhhhhcceeeEeecCCeeeEEEcccceEEEecccccC---CCceEEEeecCeEEEEEEcCeEEEE
Q 016020 269 -----LLHRNKKVD-FIEQFNEKLLVKQENENLQILDVRNAELMEVSRTEFM---TPSAFIFLYENQLFLTFRNRTVAVW 339 (396)
Q Consensus 269 -----~L~~sk~i~-FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~---~PsAFiFly~~qLFLTfs~gti~iW 339 (396)
-|+ +..|. ..|-....|.+.-.+ -|..||..+++.......... ...+...-.+++|+++-. +-+..|
T Consensus 534 ~~~~~~l~-~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~-~Gl~~~ 610 (795)
T 4a2l_A 534 ILPVSNVT-KLFTNCIYEASNGIIWVGTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN-RGISCF 610 (795)
T ss_dssp CSCSCGGG-GSCEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET-TEEEEE
T ss_pred CCCCCCCC-CCeeEEEEECCCCCEEEEeCC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC-CceEEE
Confidence 011 12232 233345668888777 789999999888776544322 233334445788888774 556677
Q ss_pred ecccceeeeec
Q 016020 340 NFRGELVTSFE 350 (396)
Q Consensus 340 d~~geL~t~fe 350 (396)
|.+....+.+.
T Consensus 611 ~~~~~~~~~~~ 621 (795)
T 4a2l_A 611 NPETEKFRNFT 621 (795)
T ss_dssp ETTTTEEEEEC
T ss_pred cCCCCcEEEcC
Confidence 87775555543
No 291
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=57.80 E-value=6.1 Score=34.09 Aligned_cols=61 Identities=15% Similarity=0.261 Sum_probs=47.4
Q ss_pred CceEEEEeccCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccch
Q 016020 217 NYTMLYSISDKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDF 278 (396)
Q Consensus 217 nYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~F 278 (396)
+-..+..++-+.+....+-+|.++.+..+....+|..|.+|.++..+..+||.|+- +.+.|
T Consensus 77 ~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG-~~L~F 137 (151)
T 2kr7_A 77 ESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAG-KTLAF 137 (151)
T ss_dssp CSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSC-CCEEE
T ss_pred CcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCC-CEEEE
Confidence 34466667766664467789999988887777799999999999999999988754 44544
No 292
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=57.40 E-value=30 Score=27.98 Aligned_cols=60 Identities=15% Similarity=0.012 Sum_probs=39.0
Q ss_pred hcceeeEeecCCeeeEEEcccceEEEecccccCC-CceEEEeecCeEEEEEEcCeEEEEecc
Q 016020 282 FNEKLLVKQENENLQILDVRNAELMEVSRTEFMT-PSAFIFLYENQLFLTFRNRTVAVWNFR 342 (396)
Q Consensus 282 ~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~-PsAFiFly~~qLFLTfs~gti~iWd~~ 342 (396)
.+.+.|+=|.|++|.+||-..++.+=...+.... .....+..+++|.|.-.++.+ +|...
T Consensus 23 ~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~ 83 (113)
T 3mez_B 23 TRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSN 83 (113)
T ss_dssp ETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECS
T ss_pred cCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECC
Confidence 4677888899999999997545666665554332 234556667777665444543 66643
No 293
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=52.92 E-value=2e+02 Score=30.31 Aligned_cols=136 Identities=14% Similarity=0.089 Sum_probs=96.5
Q ss_pred CCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce------------EEEEecc-CceEEEEEcCCeEEEEEecCCCeeee
Q 016020 186 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT------------MLYSISD-KHVQEIKISPGIMLLIFNRSSSHVPL 252 (396)
Q Consensus 186 ~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs------------~lysIs~-~~VqEIkiSpg~~Ll~~q~~~~~ipl 252 (396)
+.|--+.|++-...+++.+..+.++-|+|+.+.+ ...++.- ..-.-+.|+|+=.+.+...-.|.+-
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~- 355 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV- 355 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE-
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE-
Confidence 6899999999555588888889999999999774 3445543 7888899997338888888877754
Q ss_pred EEEEeec----------CcEEEEEEeecccC-------CccchhhhhcceeeEeecCC-------------eeeEEEccc
Q 016020 253 KILSIED----------GTVLKVFYHLLHRN-------KKVDFIEQFNEKLLVKQENE-------------NLQILDVRN 302 (396)
Q Consensus 253 kIl~Iet----------G~~l~s~~~~L~~s-------k~i~FiE~~~ekLLIKQed~-------------~L~I~Dv~~ 302 (396)
.|++++ .+.+..+. .+-+ -.+. ++.+|.+|++--..+ +-|++||..
T Consensus 356 -kwdi~~a~~~~~g~~~~~vi~kid--V~yqpGh~~~~~g~t-~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 356 -KWNIEDAIRAYAGEKVDPIKDKLD--VHYQPGHLKTVMGET-LDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp -EEEHHHHHHHHHTCSCCCEEEEEE--CSSCEEEEEETTTTS-TTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred -EEEhhHhhhhhcccccceeEEEee--cccccccceeccceE-eCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 499999 44555544 1211 1133 356899999877544 229999976
Q ss_pred ceEEE--ecccccCCCceEEEeecCeE
Q 016020 303 AELME--VSRTEFMTPSAFIFLYENQL 327 (396)
Q Consensus 303 ~ki~~--v~~t~~~~PsAFiFly~~qL 327 (396)
+++.. --++ +..|.-|+..+...+
T Consensus 432 ~~m~lv~d~p~-~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 432 DKMVLVHDGPT-FAEPHDAIAVHPSIL 457 (595)
T ss_dssp SSCEEEEEEEE-SSCCCCEEEECTTTT
T ss_pred CcEEEEEEEcC-CCCCCceEEccHHHc
Confidence 66443 3445 788999998776654
No 294
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=51.98 E-value=53 Score=28.70 Aligned_cols=47 Identities=13% Similarity=0.162 Sum_probs=34.8
Q ss_pred cEEEeecCCC------eEEEEeccCceEEEEeccCceEEEEEcCCeEEEEEec
Q 016020 199 KVLTYSAQDS------IYKVFDLKNYTMLYSISDKHVQEIKISPGIMLLIFNR 245 (396)
Q Consensus 199 kIlt~~a~d~------~YrVwdlknYs~lysIs~~~VqEIkiSpg~~Ll~~q~ 245 (396)
+++++++.++ .-+||+.+..+.+|.|.=+.=.+|+++|++-+++...
T Consensus 48 ~V~s~d~~~gk~~~~~v~~v~~~~~~~~~~~I~t~~G~~I~~T~~H~~~v~~~ 100 (185)
T 2lcj_A 48 KVYSIDLETGKVVLTDIEDVIKAPATDHLIRFELEDGRSFETTVDHPVLVYEN 100 (185)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEECCSCEEEEEETTSCEEEECSSSEEEEEET
T ss_pred EEEEEECCCCcEEEEEeeeEEEcCCCceEEEEEECCCCEEEECCCCEEEEecC
Confidence 5555554443 2478988877789999877668999999998887764
No 295
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=50.31 E-value=1.6e+02 Score=27.24 Aligned_cols=102 Identities=13% Similarity=0.254 Sum_probs=64.8
Q ss_pred CceEEEEEcCCe-EEEEEecCCCeeeeEEEEee---cCcEEEEEEe-------ecccCCccchhhhhcceeeEeecCCee
Q 016020 227 KHVQEIKISPGI-MLLIFNRSSSHVPLKILSIE---DGTVLKVFYH-------LLHRNKKVDFIEQFNEKLLVKQENENL 295 (396)
Q Consensus 227 ~~VqEIkiSpg~-~Ll~~q~~~~~iplkIl~Ie---tG~~l~s~~~-------~L~~sk~i~FiE~~~ekLLIKQed~~L 295 (396)
.++--|.+.|.- .|.+..... |..||.+. ++..+.-+.. .+..-.-+.|-++.+..++.-+++..|
T Consensus 121 ~g~EGLA~d~~~~~L~va~E~~---p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L 197 (255)
T 3qqz_A 121 CGFEGLAYSRQDHTFWFFKEKN---PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRAL 197 (255)
T ss_dssp SCCEEEEEETTTTEEEEEEESS---SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCcceEEEeCCCCEEEEEECcC---CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeE
Confidence 445678887653 333333321 66777775 1111221211 111223388899999999999999999
Q ss_pred eEEEcccceEEE---eccc------ccCCCceEEEeecCeEEEEEEc
Q 016020 296 QILDVRNAELME---VSRT------EFMTPSAFIFLYENQLFLTFRN 333 (396)
Q Consensus 296 ~I~Dv~~~ki~~---v~~t------~~~~PsAFiFly~~qLFLTfs~ 333 (396)
.++|... +.+. ..++ .+.+|....|-++++||++ |.
T Consensus 198 ~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE 242 (255)
T 3qqz_A 198 QEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SE 242 (255)
T ss_dssp EEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ET
T ss_pred EEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cC
Confidence 9999664 4444 2222 2458999999999999998 55
No 296
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=50.23 E-value=46 Score=26.60 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=30.8
Q ss_pred hcceeeEeecCCeeeEEEcccceEEEecccccC--CCceEEEeecCeEEEE
Q 016020 282 FNEKLLVKQENENLQILDVRNAELMEVSRTEFM--TPSAFIFLYENQLFLT 330 (396)
Q Consensus 282 ~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~--~PsAFiFly~~qLFLT 330 (396)
.+.|-|+=|.|.+|.+|+ .++.+=+..+... .+.-+.+-.+++|.|.
T Consensus 18 sg~y~l~~q~DgNLvly~--~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~ 66 (105)
T 4h3o_A 18 VEPYHFIMQDDCNLVLYD--HSTSTWASNTEIGGKSGCSAVLQSDGNFVVY 66 (105)
T ss_dssp ETTEEEEECTTSCEEEEE--TTEEEEECCCCCTTCCSCEEEECTTSCEEEE
T ss_pred ECCEEEEECCCCeEEEEE--CCEEEEEecCCCCCCccEEEEEeCCccEEEE
Confidence 477889999999999998 4455556665432 2333445556665544
No 297
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=47.74 E-value=2.4e+02 Score=28.73 Aligned_cols=139 Identities=12% Similarity=0.069 Sum_probs=75.7
Q ss_pred CceEEEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecc----cCCccchh-hhhcceeeEeecCCeeeEEEcc
Q 016020 227 KHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLH----RNKKVDFI-EQFNEKLLVKQENENLQILDVR 301 (396)
Q Consensus 227 ~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~----~sk~i~Fi-E~~~ekLLIKQed~~L~I~Dv~ 301 (396)
..|..|...+.-.|.+.... -|..++.++|+...-.. .. ....|.-+ +--...|.+.-.++-|-.||..
T Consensus 450 ~~v~~i~~d~~g~lwigt~~----Gl~~~~~~~~~~~~~~~--~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 523 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTHA----GVFVIDLASKKVIHHYD--TSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD 523 (781)
T ss_dssp CCEEEEEECTTSEEEEEETT----EEEEEESSSSSCCEEEC--TTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT
T ss_pred CeEEEEEECCCCCEEEEECC----ceEEEeCCCCeEEeccc--CcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC
Confidence 45666655533233333221 25667777665432211 01 01223222 3345678888887779999999
Q ss_pred cceEEEecccccC---CCceEEEeecCeEEEEEEcCeEEEEecccceeeeeccc-cccCCC------CCCCcEEEccCCc
Q 016020 302 NAELMEVSRTEFM---TPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDH-LLWHPD------CNTNNIYITSDQD 371 (396)
Q Consensus 302 ~~ki~~v~~t~~~---~PsAFiFly~~qLFLTfs~gti~iWd~~geL~t~fedh-~l~~~~------c~~n~~~it~~qd 371 (396)
+++.......... .+.+...-.++.|+++-.+|.+-.||.+....+.+... -|.... -.+++++++.+.-
T Consensus 524 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 524 MQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTG 603 (781)
T ss_dssp CCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSC
T ss_pred CCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCc
Confidence 9888776543322 22344444678899887777768888876433333221 111111 2456777776554
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=46.50 E-value=3.6e+02 Score=30.27 Aligned_cols=149 Identities=12% Similarity=0.141 Sum_probs=80.3
Q ss_pred EeeCCCCcEEEeec---CCCeEEEEeccCceEEEEeccCceEEEEEcC----CeEEEEEecCCCe------eeeEEEEee
Q 016020 192 EFDDVNGKVLTYSA---QDSIYKVFDLKNYTMLYSISDKHVQEIKISP----GIMLLIFNRSSSH------VPLKILSIE 258 (396)
Q Consensus 192 EFDd~NgkIlt~~a---~d~~YrVwdlknYs~lysIs~~~VqEIkiSp----g~~Ll~~q~~~~~------iplkIl~Ie 258 (396)
|+..+++.|-.... ....|-|-...+.+.+++|+++++.|+..++ .--|.+.+-.++. --+.+++.+
T Consensus 421 ~l~gv~~iWtl~~~~~~~~~~yLvlS~~~~T~Vl~i~~e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~ 500 (1158)
T 3ei3_A 421 DLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQE 500 (1158)
T ss_dssp CCCSCCEEEEECCCSSCSSCCEEEEEETTEEEEEEEETTEEEEECCTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESS
T ss_pred cCCCccEEEEEeecCCCCCCCEEEEECCCCeEEEEEeCCcccccccccccCCCCcEEEEEcCCCeEEEEecCEEEEEECC
Confidence 45556666666532 3456888899999999999999999986441 1122222211111 123444443
Q ss_pred cCcEEEEEEeecccCCccchhhhhcceeeEeecCCeeeEEEcccceEEEecccc-cCCCceEEEeec-------CeEEEE
Q 016020 259 DGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELMEVSRTE-FMTPSAFIFLYE-------NQLFLT 330 (396)
Q Consensus 259 tG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~-~~~PsAFiFly~-------~qLFLT 330 (396)
.++.+.+... +..+.|----..+.++++.. |+.|..+.+..+++.++.+-. ...+++.-+.+. .-+.+-
T Consensus 501 ~~~~~~~w~~--p~~~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg 577 (1158)
T 3ei3_A 501 PKALVSEWKE--PQAKNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIG 577 (1158)
T ss_dssp SCCEEEEECC--TTCCCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEE
T ss_pred CCeEEEEEEC--CCCCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEE
Confidence 3333333321 11122211111235677774 777878888777776653322 223445444332 223444
Q ss_pred EE-cCeEEEEeccc
Q 016020 331 FR-NRTVAVWNFRG 343 (396)
Q Consensus 331 fs-~gti~iWd~~g 343 (396)
+. +++++|+++..
T Consensus 578 ~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 578 LWTDISARILKLPS 591 (1158)
T ss_dssp ETTTTEEEEEETTT
T ss_pred ECCCCEEEEEECCC
Confidence 43 68999999986
No 299
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=44.97 E-value=47 Score=36.09 Aligned_cols=60 Identities=18% Similarity=0.234 Sum_probs=44.2
Q ss_pred cceeeEeecCCeeeEEEcccceEEEecccc------------cCCCceEEEeecCeEEEEEE---cCeEEEEeccc
Q 016020 283 NEKLLVKQENENLQILDVRNAELMEVSRTE------------FMTPSAFIFLYENQLFLTFR---NRTVAVWNFRG 343 (396)
Q Consensus 283 ~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~------------~~~PsAFiFly~~qLFLTfs---~gti~iWd~~g 343 (396)
..+|++=-.|..|||||+.++++..+..=. ...|..++=+.+ .+.++++ +|.+++|.+.+
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~-~~lv~y~P~~~G~Fk~~~l~~ 305 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYN-NTLVTLLPLENGLFQMGTLLV 305 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESS-SEEEEEETTTTCEEEEEEEEC
T ss_pred CcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhhee-eEEEEEecCCCCeEEEEEEEE
Confidence 458888889999999999999988743321 124666776665 5555555 48999999966
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=44.74 E-value=66 Score=31.25 Aligned_cols=78 Identities=18% Similarity=0.349 Sum_probs=48.8
Q ss_pred CCeeeEEEcc--cceEEEeccc------ccCCCceEEEee--cCe--EEEEEE---cCeEEEEeccc-----ceeeeecc
Q 016020 292 NENLQILDVR--NAELMEVSRT------EFMTPSAFIFLY--ENQ--LFLTFR---NRTVAVWNFRG-----ELVTSFED 351 (396)
Q Consensus 292 d~~L~I~Dv~--~~ki~~v~~t------~~~~PsAFiFly--~~q--LFLTfs---~gti~iWd~~g-----eL~t~fed 351 (396)
++.|-++|.. +.+..++..+ ..+.|-.+-+.. +++ ||+.=. ..+|++|+++. .+++++++
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc
Confidence 4455667766 2344443333 346788888776 354 444422 35899998875 26778998
Q ss_pred ccccCCC----CCCCcEEEccC
Q 016020 352 HLLWHPD----CNTNNIYITSD 369 (396)
Q Consensus 352 h~l~~~~----c~~n~~~it~~ 369 (396)
..+-.|| -+++..|+|.+
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEES
T ss_pred CCCCCCceEEEeCCCCEEecCC
Confidence 7777666 45677777765
No 301
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=43.84 E-value=9.6 Score=33.91 Aligned_cols=60 Identities=20% Similarity=0.246 Sum_probs=45.1
Q ss_pred ceEEEEeccCceE-EEEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccch
Q 016020 218 YTMLYSISDKHVQ-EIKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDF 278 (396)
Q Consensus 218 Ys~lysIs~~~Vq-EIkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~F 278 (396)
-+.+..++-+.+. +..+-+|.++.+..+....+|..|.+|.+.+.+..+||.|+- +.+.|
T Consensus 96 ~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAG-k~L~F 156 (169)
T 4dt4_A 96 PDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAG-QTVHF 156 (169)
T ss_dssp GGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTT-CCEEE
T ss_pred hHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCC-CEEEE
Confidence 3455555554443 245678999988888878899999999999999999988764 55554
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=43.55 E-value=2.1e+02 Score=26.69 Aligned_cols=49 Identities=16% Similarity=0.259 Sum_probs=33.2
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEec-----cCceEEEEEcCC
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSIS-----DKHVQEIKISPG 237 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs-----~~~VqEIkiSpg 237 (396)
|.+|--+.|++ +|+++..+.. +.+++++ +.+ .+-.++ ......|.++|+
T Consensus 30 l~~P~~ia~~p-dG~l~V~e~~-g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pd 85 (352)
T 2ism_A 30 LEVPWALAFLP-DGGMLIAERP-GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPR 85 (352)
T ss_dssp CSCEEEEEECT-TSCEEEEETT-TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCCceEEEEcC-CCeEEEEeCC-CeEEEEE--CCCccEeecceEeecCCCCceeEEECCC
Confidence 77899999998 7898887765 7777777 444 222232 135667777765
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=40.30 E-value=86 Score=29.54 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=32.0
Q ss_pred ecccccCCCceEEEeecCeEEEEEEcCeEEEEecccc
Q 016020 308 VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGE 344 (396)
Q Consensus 308 v~~t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~ge 344 (396)
+..+....|.+..|.+++.||++=+.|.|.++|-+|+
T Consensus 23 ~va~~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~ 59 (354)
T 3a9g_A 23 EVASDLEVPWSIAPLGGGRYLVTERPGRLVLISPSGK 59 (354)
T ss_dssp EEECSCSCEEEEEEEETTEEEEEETTTEEEEECSSCE
T ss_pred EEeCCCCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc
Confidence 3345678899999999999999999999999998775
No 304
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=39.85 E-value=11 Score=32.81 Aligned_cols=61 Identities=21% Similarity=0.344 Sum_probs=46.0
Q ss_pred CceEEEEeccCceEE-EEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccch
Q 016020 217 NYTMLYSISDKHVQE-IKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDF 278 (396)
Q Consensus 217 nYs~lysIs~~~VqE-IkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~F 278 (396)
+-+.++.++-+.+.. ..+-+|.++.+..+....+|.+|..+...+.+..+||.|+- +.+.|
T Consensus 67 ~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG-k~L~F 128 (158)
T 3cgm_A 67 DPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAG-KDLDF 128 (158)
T ss_dssp CGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTT-CCEEE
T ss_pred CcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccC-CEEEE
Confidence 334666666666654 46778999888777777889999999999999999988754 44444
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=39.59 E-value=3.2e+02 Score=27.83 Aligned_cols=232 Identities=14% Similarity=0.107 Sum_probs=131.5
Q ss_pred cccceeeeccccceEEEecCCC--CceEEEEee-------ecCCCeEEEEEeEecCCCceeeeEeeehhhhhh-CCCCC-
Q 016020 107 SGVCAAFSRETNRRICFLNVSP--DEVIRSLFY-------NKNNDSLITVSVYASDNFSSLKCRSTKIEYIRR-GKPDS- 175 (396)
Q Consensus 107 sG~c~af~~~t~~~ic~lN~s~--~evIrsify-------N~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~-gk~~~- 175 (396)
.+..+.+|..+++..-++..+. ..-.+.|-. ....+.|+++.......-.......++ -.. |+...
T Consensus 161 ~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~---r~~~G~~~~~ 237 (496)
T 3kya_A 161 HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIK---RNADGTFDDR 237 (496)
T ss_dssp EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEE---CCTTSCCSTT
T ss_pred CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEe---cCCCCceeec
Confidence 4567788888777776665442 334788877 777777777544321100001111111 011 23311
Q ss_pred C-CcceeecccCCCCeEEeeCCCCcEEEeecCCCeEEEEecc-------C--------------ceEEEEeccCc-eEEE
Q 016020 176 G-FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-------N--------------YTMLYSISDKH-VQEI 232 (396)
Q Consensus 176 ~-~~LF~~~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlk-------n--------------Ys~lysIs~~~-VqEI 232 (396)
. .-... ...||--+-+|+.+|.+...+..++.+.++|++ + ++.++.+.+.. -.-|
T Consensus 238 ~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~i 315 (496)
T 3kya_A 238 SDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQI 315 (496)
T ss_dssp SCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEE
T ss_pred ccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEE
Confidence 1 01222 478999999999999999999999999999998 2 23567776533 3578
Q ss_pred EEcCCeE-EEEEecCCCeeeeEEEEeecCcEE--EEEEeecccC-------Cccchhh---------------hhcceee
Q 016020 233 KISPGIM-LLIFNRSSSHVPLKILSIEDGTVL--KVFYHLLHRN-------KKVDFIE---------------QFNEKLL 287 (396)
Q Consensus 233 kiSpg~~-Ll~~q~~~~~iplkIl~IetG~~l--~s~~~~L~~s-------k~i~FiE---------------~~~ekLL 287 (396)
.++|.=- |.+....+..|-.-=++-.+|+.. ..+.-..... ..-+|.. ..++..+
T Consensus 316 a~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyV 395 (496)
T 3kya_A 316 FIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYF 395 (496)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEE
T ss_pred EEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEE
Confidence 9986543 445444433332211333333321 1111000000 0011111 1233333
Q ss_pred EeecCCeeeEEEcccceEEEecc-----------------------cccCCCceEEEeec-CeEEEEEEc-CeEEEEecc
Q 016020 288 VKQENENLQILDVRNAELMEVSR-----------------------TEFMTPSAFIFLYE-NQLFLTFRN-RTVAVWNFR 342 (396)
Q Consensus 288 IKQed~~L~I~Dv~~~ki~~v~~-----------------------t~~~~PsAFiFly~-~qLFLTfs~-gti~iWd~~ 342 (396)
....++.|+.+| .++.+..+.- +.+..|....+..+ +.||++=+. ..|+.++.+
T Consensus 396 aD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 396 VDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp EEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 345788888888 5676655421 13677888888875 899998776 799999998
Q ss_pred cc
Q 016020 343 GE 344 (396)
Q Consensus 343 ge 344 (396)
++
T Consensus 475 ~~ 476 (496)
T 3kya_A 475 QE 476 (496)
T ss_dssp CC
T ss_pred CC
Confidence 85
No 306
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=36.92 E-value=3.5e+02 Score=27.40 Aligned_cols=57 Identities=12% Similarity=0.131 Sum_probs=38.8
Q ss_pred eeeEEEEeecCcEEEEEEeecccC-------Cccchhh---hhcc---eeeEeecCCeeeEEEcccceEEE
Q 016020 250 VPLKILSIEDGTVLKVFYHLLHRN-------KKVDFIE---QFNE---KLLVKQENENLQILDVRNAELME 307 (396)
Q Consensus 250 iplkIl~IetG~~l~s~~~~L~~s-------k~i~FiE---~~~e---kLLIKQed~~L~I~Dv~~~ki~~ 307 (396)
..+.-+|+.||+.+=.+... ++. ...-+.. ..++ .++..+.++.|.++|..|++++-
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~-~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 360 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHT-PNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQN 360 (582)
T ss_dssp SEEEEECTTTCCEEEEEESS-TTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ceEEEEeCCCCCEEEEEeCC-CCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEec
Confidence 45788899999999877631 221 1222222 2342 56778899999999999999874
No 307
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=34.86 E-value=2.8e+02 Score=25.70 Aligned_cols=146 Identities=9% Similarity=0.087 Sum_probs=77.8
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEecc-CceEEEEeccCceEEEEEcCCeEEEEEecCC----------CeeeeE
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSISDKHVQEIKISPGIMLLIFNRSS----------SHVPLK 253 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlk-nYs~lysIs~~~VqEIkiSpg~~Ll~~q~~~----------~~iplk 253 (396)
|..=||+-+|+ |.|--++..|. -+++-|+ +.+..-.|++..+.-|-+.++.+........ +...|.
T Consensus 15 i~n~g~~~~~g--~~iy~~n~~d~-~~ly~~~~dg~~~~~l~~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy 91 (302)
T 3s25_A 15 LYNAGLFCESD--GEVFFSNTNDN-GRLYAMNIDGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLC 91 (302)
T ss_dssp GGGTTCEEEET--TEEEEEEGGGT-TEEEEEETTSCSCEEEEEEEEEEEEECSSEEEEEEECC------CCSSCCSEEEE
T ss_pred eecceEEEEeC--CEEEEEeCCCC-ceEEEEcCCCCCCEEccCCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEE
Confidence 44456666554 44444333321 2333333 3444555555556666666666655544331 234566
Q ss_pred EEEeecCcEEEEEEeecccCCccchhhhhcceeeEee----cCCeeeEEEcccceEEEecccccCCCceEEEeecCeEEE
Q 016020 254 ILSIEDGTVLKVFYHLLHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNAELMEVSRTEFMTPSAFIFLYENQLFL 329 (396)
Q Consensus 254 Il~IetG~~l~s~~~~L~~sk~i~FiE~~~ekLLIKQ----ed~~L~I~Dv~~~ki~~v~~t~~~~PsAFiFly~~qLFL 329 (396)
.+++..++...-. ...-..|. +.+++|+..- .+..|...|+..++..++..+.. .++ -...+.||.
T Consensus 92 ~i~~dg~~~~~l~-----~~~~~~~s-~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~---~~~-~~~g~~iy~ 161 (302)
T 3s25_A 92 RIKRNGHGSTVLD-----PDPCIYAS-LIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL---FTC-NTSDRYFYY 161 (302)
T ss_dssp EEETTSCCCEEEE-----CSCEEEEE-EETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC---CCS-EEETTEEEE
T ss_pred EEeCCCCcceEee-----cCCccEEE-EeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc---eEe-eEECCEEEE
Confidence 6666666543321 11222333 3788888764 45566666776666555544433 223 345677777
Q ss_pred EEE-cCeEEEEeccc
Q 016020 330 TFR-NRTVAVWNFRG 343 (396)
Q Consensus 330 Tfs-~gti~iWd~~g 343 (396)
|-. ...|..-+++|
T Consensus 162 t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 162 NNPKNGQLYRYDTAS 176 (302)
T ss_dssp ECTTTCCEEEEETTT
T ss_pred EeCCCceEEEEECCC
Confidence 755 36888888888
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=34.25 E-value=5.4e+02 Score=28.83 Aligned_cols=63 Identities=13% Similarity=0.021 Sum_probs=36.2
Q ss_pred hcceeeEeecCCee--eEEEcccceEEEecc-cccCCCceEEEeecCeEEEEEEcCeEEEEecccc
Q 016020 282 FNEKLLVKQENENL--QILDVRNAELMEVSR-TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGE 344 (396)
Q Consensus 282 ~~ekLLIKQed~~L--~I~Dv~~~ki~~v~~-t~~~~PsAFiFly~~qLFLTfs~gti~iWd~~ge 344 (396)
.++.|++.--=+++ --|+-..+++..+.+ ....+..|--|+.+.....+=..|.+-+...+.+
T Consensus 935 ~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp ETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTT
T ss_pred cCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCCC
Confidence 45555555433333 335555677777653 4566778888887764433333367766665554
No 309
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=31.40 E-value=4.5e+02 Score=27.00 Aligned_cols=187 Identities=13% Similarity=0.173 Sum_probs=103.5
Q ss_pred ccchhhhhhc-cccceeeec-cccceEEEecCCCCc----------eEEEEeeecCCCe----EEEEEeEecCCCceeee
Q 016020 97 ARDIVFALAH-SGVCAAFSR-ETNRRICFLNVSPDE----------VIRSLFYNKNNDS----LITVSVYASDNFSSLKC 160 (396)
Q Consensus 97 a~dii~~L~~-sG~c~af~~-~t~~~ic~lN~s~~e----------vIrsifyN~~n~s----lI~vSv~~sd~~s~L~c 160 (396)
+.+.|++.+. .|.-.|+|. .||+.+=........ +-|++-|-...+. |++.+ .| ..|.|
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t---~d--g~l~A 135 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ---LD--GNVAA 135 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC---TT--SEEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc---CC--CEEEE
Confidence 4788888887 888899999 999998877665432 2233433111122 33321 11 23333
Q ss_pred EeeehhhhhhCCCCCCCcceeec--------ccCCCCeEEeeCCCCcEEEeec-----CCCeEEEEeccCceEEEEeccC
Q 016020 161 RSTKIEYIRRGKPDSGFALFESE--------SLKWPGFVEFDDVNGKVLTYSA-----QDSIYKVFDLKNYTMLYSISDK 227 (396)
Q Consensus 161 r~~~~~~i~~gk~~~~~~LF~~~--------~l~~PgfVEFDd~NgkIlt~~a-----~d~~YrVwdlknYs~lysIs~~ 227 (396)
--. +- |.++.+.. .+..+-.| .+|++++-.+ .++.++-+|.++.+.+.+....
T Consensus 136 lDa-----~T-----G~~~W~~~~~~~~~~~~~~ssP~v----~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 136 LNA-----ET-----GETVWKVENSDIKVGSTLTIAPYV----VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EET-----TT-----CCEEEEEECCCGGGTCBCCSCCEE----ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEC-----CC-----CCEEEeecCCCCCccceeecCCEE----ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 211 12 22232211 12222223 1467776554 4789999999999999887652
Q ss_pred c-eEE---------------------------------------EEE--cCCeEEEEEecCCC---------------ee
Q 016020 228 H-VQE---------------------------------------IKI--SPGIMLLIFNRSSS---------------HV 250 (396)
Q Consensus 228 ~-VqE---------------------------------------Iki--Spg~~Ll~~q~~~~---------------~i 250 (396)
. ..+ +.+ ..|++.+ +..+ ..
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~---g~g~~~p~~~~~r~gd~~y~~ 278 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYF---GTGNPAPWNETMRPGDNKWTM 278 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEE---ECCCCSCSCGGGSCSCCTTSS
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEE---eCCCCccccCcccCCCccccc
Confidence 1 100 111 2232222 2222 13
Q ss_pred eeEEEEeecCcEEEEEEeecccC--------Cccchhh---hhcc--e-eeEeecCCeeeEEEcccceEEE
Q 016020 251 PLKILSIEDGTVLKVFYHLLHRN--------KKVDFIE---QFNE--K-LLVKQENENLQILDVRNAELME 307 (396)
Q Consensus 251 plkIl~IetG~~l~s~~~~L~~s--------k~i~FiE---~~~e--k-LLIKQed~~L~I~Dv~~~ki~~ 307 (396)
.+--+|..||+.+-.+... ++. .++ ..+ ..++ + ++....++.|-++|..|++++-
T Consensus 279 sv~Ald~~TG~~~W~~q~~-~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKT-PHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp EEEEEETTTCCEEEEEESS-TTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred eEEEEeCCCCceeeEeecC-CCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 5788999999998876632 221 111 111 1242 3 4557799999999999999875
No 310
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=31.26 E-value=2.5e+02 Score=27.78 Aligned_cols=77 Identities=12% Similarity=0.195 Sum_probs=52.0
Q ss_pred eeEEEEeecC--cEEEEEEee---cccCCc-----cchhhhh----cceeeEee-cCCeeeEEEcccceEEEecccccCC
Q 016020 251 PLKILSIEDG--TVLKVFYHL---LHRNKK-----VDFIEQF----NEKLLVKQ-ENENLQILDVRNAELMEVSRTEFMT 315 (396)
Q Consensus 251 plkIl~IetG--~~l~s~~~~---L~~sk~-----i~FiE~~----~ekLLIKQ-ed~~L~I~Dv~~~ki~~v~~t~~~~ 315 (396)
.|-+||+.|+ +.++...+. +..+.. ||..... +.+.+|-- .+.-|-+||+.+++-.++.. ++|.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~-~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH-PTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC-GGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc-CCCc
Confidence 4678999999 999887742 112222 2222111 45667665 46679999999999999985 5566
Q ss_pred Cc-eEEEeecCeEE
Q 016020 316 PS-AFIFLYENQLF 328 (396)
Q Consensus 316 Ps-AFiFly~~qLF 328 (396)
|. ++.|..+++-|
T Consensus 203 pd~~~~~~i~G~~~ 216 (381)
T 3q6k_A 203 AERPTKFDYGGKEY 216 (381)
T ss_dssp CCSCEEEEETTEEE
T ss_pred cccCcceEECCEEe
Confidence 75 78887777655
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=30.92 E-value=2.5e+02 Score=26.24 Aligned_cols=71 Identities=11% Similarity=0.154 Sum_probs=42.7
Q ss_pred ccCCccchhhhhcceeeEeecCCeeeEEEcccceEEE-ec--c----cccCCCceEEEee----cCeEEEEEEc------
Q 016020 271 HRNKKVDFIEQFNEKLLVKQENENLQILDVRNAELME-VS--R----TEFMTPSAFIFLY----ENQLFLTFRN------ 333 (396)
Q Consensus 271 ~~sk~i~FiE~~~ekLLIKQed~~L~I~Dv~~~ki~~-v~--~----t~~~~PsAFiFly----~~qLFLTfs~------ 333 (396)
.+-..|.|.+ .+..|+|-+.++.|.++|- .++..+ +. + ....-|-...|.+ ++.||++.+.
T Consensus 18 ~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECS-TTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcC-CCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3334577777 5665888888889999984 444332 11 0 1111234566666 6889999765
Q ss_pred --CeEEEEeccc
Q 016020 334 --RTVAVWNFRG 343 (396)
Q Consensus 334 --gti~iWd~~g 343 (396)
..|.-|+.++
T Consensus 96 ~~~~v~r~~~~~ 107 (353)
T 2g8s_A 96 AGTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEEECT
T ss_pred ceeEEEEEEECC
Confidence 3566666653
No 312
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=30.50 E-value=1.4e+02 Score=23.66 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=35.4
Q ss_pred hcceeeEeecCCeeeEEEcccceEEEecccccCC-CceEEEeecCeEEEEEEcCeEEEEec
Q 016020 282 FNEKLLVKQENENLQILDVRNAELMEVSRTEFMT-PSAFIFLYENQLFLTFRNRTVAVWNF 341 (396)
Q Consensus 282 ~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~-PsAFiFly~~qLFLTfs~gti~iWd~ 341 (396)
.+.+-|.=|.|++|.+||- ++.+=...+.... +..+.+..+++|.|.=+++. .+|..
T Consensus 18 ~g~~~L~~q~dGnLvly~~--~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~-~~W~S 75 (109)
T 3dzw_A 18 NGRYVFIMQEDCNLVLYDV--DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNN-PIWAS 75 (109)
T ss_dssp ETTEEEEECTTSCEEEEET--TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSC-EEEEC
T ss_pred CCCEEEEEcCCCcEEEEeC--CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCC-EEEEC
Confidence 4667777789999999986 4555555554332 33455666777766533343 36743
No 313
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=29.00 E-value=1.1e+02 Score=30.03 Aligned_cols=67 Identities=12% Similarity=0.145 Sum_probs=42.9
Q ss_pred hhcceeeEeec--CC--eeeEEEcccceEEE-------ecccccCCCc-eEEEeecCeEEEEEEc-CeEEEEecccceee
Q 016020 281 QFNEKLLVKQE--NE--NLQILDVRNAELME-------VSRTEFMTPS-AFIFLYENQLFLTFRN-RTVAVWNFRGELVT 347 (396)
Q Consensus 281 ~~~ekLLIKQe--d~--~L~I~Dv~~~ki~~-------v~~t~~~~Ps-AFiFly~~qLFLTfs~-gti~iWd~~geL~t 347 (396)
..+.+.|..++ .. .|.++|+.++++.+ -+++... |. ++-.+...++|++-.. ..|-+-|.+|+.+-
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~-~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~~~~ 114 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPA-VFGSRPSPDSQYILVAQNNISRLSSINSQGEIIR 114 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTT-CCCEEESSSTTSEEEEEGGGTEEEEECTTCCEEE
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCccc-ceeeEEecCCCEEEEEeCCcceEEEECCCceEEE
Confidence 34445555543 44 89999999999885 2333332 42 3444667777875433 57888999998555
Q ss_pred e
Q 016020 348 S 348 (396)
Q Consensus 348 ~ 348 (396)
+
T Consensus 115 k 115 (369)
T 3s9j_A 115 N 115 (369)
T ss_dssp E
T ss_pred E
Confidence 3
No 314
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=28.72 E-value=83 Score=31.04 Aligned_cols=60 Identities=28% Similarity=0.437 Sum_probs=42.0
Q ss_pred ccccCCCceEEEeecCeEEEEEEcC-eEEEEecc-cc--eeeeecc------------ccccCCC-CCCCcEEEccC
Q 016020 310 RTEFMTPSAFIFLYENQLFLTFRNR-TVAVWNFR-GE--LVTSFED------------HLLWHPD-CNTNNIYITSD 369 (396)
Q Consensus 310 ~t~~~~PsAFiFly~~qLFLTfs~g-ti~iWd~~-ge--L~t~fed------------h~l~~~~-c~~n~~~it~~ 369 (396)
.+....|.+..|++++.||++-+.| .|.+++.. |. .+..+.+ -+-++|+ -.++.+|++..
T Consensus 23 a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 23 LSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred ECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 3567789999999999999999985 78888764 53 3444443 2344444 33677888764
No 315
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=28.11 E-value=55 Score=26.33 Aligned_cols=56 Identities=20% Similarity=0.163 Sum_probs=33.7
Q ss_pred hcceeeEeecCCeeeEEEcccceEEEecccccCC-CceEEEeecCeEEEEEEcCeEEEEe
Q 016020 282 FNEKLLVKQENENLQILDVRNAELMEVSRTEFMT-PSAFIFLYENQLFLTFRNRTVAVWN 340 (396)
Q Consensus 282 ~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~-PsAFiFly~~qLFLTfs~gti~iWd 340 (396)
.+.+.|+=|.|.+|.+||-.. +=...+.... +....+..+++|.|.=+++.+-+|.
T Consensus 19 ~g~~~L~~q~dGnLvl~~~~~---vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~ 75 (111)
T 3mez_A 19 YESAAFVMQGDCNLVLYNEAG---GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWV 75 (111)
T ss_dssp ETTEEEEECTTSCEEEECSSC---CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEE
T ss_pred cCCEEEEEccCCeEEEECCCC---EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEE
Confidence 577788889999999998643 3333343222 2344556667766554444445664
No 316
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=27.58 E-value=62 Score=29.08 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=37.7
Q ss_pred cccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCceEEEEec--cCceEEEEEcCCeEEEEEecCCCeeeeEEEEeecC
Q 016020 183 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKHVQEIKISPGIMLLIFNRSSSHVPLKILSIEDG 260 (396)
Q Consensus 183 ~~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs~lysIs--~~~VqEIkiSpg~~Ll~~q~~~~~iplkIl~IetG 260 (396)
..-++.|.|+|.+. +.++ +. ++.. |---++.+.. -++ +......++..|..|++.... .|..|
T Consensus 11 i~a~~~G~V~f~nl--~~v~-~~-~G~~-vv~~r~g~i~-I~d~~g~e~~~~~ipyGa~L~V~dG~---------~V~~G 75 (190)
T 2auk_A 11 IQVKNKGSIKLSNV--KSVV-NS-SGKL-VITSRNTELK-LIDEFGRTKESYKVPYGAVLAKGDGE---------QVAGG 75 (190)
T ss_dssp EECCSSEEEEEESC--CEEE-CT-TSCE-EECCSSCEEE-EECTTSCEEEEEECCTTCEESSCTTC---------EECTT
T ss_pred EEcccCeEEEEccc--EEEE-CC-CCCE-EEEccccEEE-EEcCCCcEEEEEEcCCCCEEEecCCC---------EEcCC
Confidence 44578999999754 4443 22 2222 2222222221 111 234455777788888776655 35667
Q ss_pred cEEEEEE
Q 016020 261 TVLKVFY 267 (396)
Q Consensus 261 ~~l~s~~ 267 (396)
+.+.+..
T Consensus 76 ~~laewD 82 (190)
T 2auk_A 76 ETVANWD 82 (190)
T ss_dssp CEEEECC
T ss_pred CEEEEEc
Confidence 7777643
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=27.33 E-value=4.3e+02 Score=25.47 Aligned_cols=175 Identities=11% Similarity=0.109 Sum_probs=94.0
Q ss_pred ecCCCeEEEEeccCceEEEEeccCceEEEE-Ec------CCeEEEEEecCCCeeeeEEEEeecCcEEEEEEe-ecccCCc
Q 016020 204 SAQDSIYKVFDLKNYTMLYSISDKHVQEIK-IS------PGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYH-LLHRNKK 275 (396)
Q Consensus 204 ~a~d~~YrVwdlknYs~lysIs~~~VqEIk-iS------pg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~-~L~~sk~ 275 (396)
...|+.+--+|.+|++.+.++.....+-+- .+ +|-++ +-.+ ....-|-.|+.++|.....+.. .|-...+
T Consensus 16 ~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~-vv~p-~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP 93 (339)
T 2be1_A 16 ADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETL-IIEP-FGDGNIYYFNAHQGLQKLPLSIRQLVSTSP 93 (339)
T ss_dssp EETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEE-EECC-STTTEEEEEETTTEEEEEEEEHHHHHTTCS
T ss_pred EeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEE-EEEE-CCCCEEEEEECCCCcEEeeeccccceeccc
Confidence 455677777777778877777654101111 11 12222 2222 1245566778888866655441 1111222
Q ss_pred cch------hhh----hcceeeEeecCCeeeEEEcccceEEEecccccC----------CCc----------eEEEeecC
Q 016020 276 VDF------IEQ----FNEKLLVKQENENLQILDVRNAELMEVSRTEFM----------TPS----------AFIFLYEN 325 (396)
Q Consensus 276 i~F------iE~----~~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~----------~Ps----------AFiFly~~ 325 (396)
+.+ .+. .++.+++...+..|-.+|+.||+++-.-.+... .|+ .-+|+-..
T Consensus 94 ~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~ 173 (339)
T 2be1_A 94 LHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKT 173 (339)
T ss_dssp EEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEE
T ss_pred cccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecc
Confidence 221 011 478999999999999999999999985544321 121 12333222
Q ss_pred eEEEEEEc--CeEEEEecccceeeeecccccc------CCCCCCCcEEEccCCcEEEEeccCCCCCcc
Q 016020 326 QLFLTFRN--RTVAVWNFRGELVTSFEDHLLW------HPDCNTNNIYITSDQDLIISYCKAEPEDQW 385 (396)
Q Consensus 326 qLFLTfs~--gti~iWd~~geL~t~fedh~l~------~~~c~~n~~~it~~qd~ii~~~~~~~~~~~ 385 (396)
...+++.+ |. +|++.- .+......- .....++.+|++.....+..+=+..+...|
T Consensus 174 ~y~v~~~~~sG~--~W~~~~---s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 174 IFELGIHSYDGA--SYNVTY---STWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEECEECCTTSC--CCCCEE---EEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred eEEEEEECCCCC--eEEEec---ccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 22333322 32 465531 011111110 111346888888888899998888888888
No 318
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=26.72 E-value=50 Score=31.00 Aligned_cols=37 Identities=24% Similarity=0.477 Sum_probs=31.8
Q ss_pred ccccCCCceEEEeecCe-EEEEEEcCeEEEEeccccee
Q 016020 310 RTEFMTPSAFIFLYENQ-LFLTFRNRTVAVWNFRGELV 346 (396)
Q Consensus 310 ~t~~~~PsAFiFly~~q-LFLTfs~gti~iWd~~geL~ 346 (396)
.+....|.+..|.+++. ||++-+.|.|.+++-+|.+.
T Consensus 14 a~~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~ 51 (353)
T 2g8s_A 14 QDKLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLS 51 (353)
T ss_dssp EEEESSEEEEEECSTTCCEEEEETTTEEEEEETTTEEC
T ss_pred ECCCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCcee
Confidence 34677899999999999 99999999999999887643
No 319
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=22.78 E-value=4.7e+02 Score=24.38 Aligned_cols=81 Identities=15% Similarity=0.233 Sum_probs=45.4
Q ss_pred EEeeccchhhhhhccccceeeecc-------ccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 93 EIVAARDIVFALAHSGVCAAFSRE-------TNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 93 EIv~a~dii~~L~~sG~c~af~~~-------t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
|.+.-+++++.+++.|.....+.. .++-+.-+|-..++.+..+|.-..++.++++| +.=+++.++.
T Consensus 3 dli~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T-------~~G~~~~~~~ 75 (312)
T 1suu_A 3 DLMQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMIS-------NEGKLYLINA 75 (312)
T ss_dssp -----CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEE-------TTSEEEEEEG
T ss_pred cccCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEE-------CCCeEEEEEH
Confidence 566678899999999998654321 23346666744444444566666788888876 4456777777
Q ss_pred hhhhhC-CCCCCCcce
Q 016020 166 EYIRRG-KPDSGFALF 180 (396)
Q Consensus 166 ~~i~~g-k~~~~~~LF 180 (396)
.+|..+ .-..|.|+-
T Consensus 76 ~~ip~~~r~~~G~~i~ 91 (312)
T 1suu_A 76 YEIKDSSRASKGQNIS 91 (312)
T ss_dssp GGSCC-------CBGG
T ss_pred HHCCCCCccCCCcChh
Confidence 777443 224455543
No 320
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=22.64 E-value=26 Score=30.99 Aligned_cols=57 Identities=19% Similarity=0.338 Sum_probs=41.1
Q ss_pred EEEEeccCceEE-EEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccch
Q 016020 220 MLYSISDKHVQE-IKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDF 278 (396)
Q Consensus 220 ~lysIs~~~VqE-IkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~F 278 (396)
.+..++-+.+.. ..+-+|.++.+..+... +|.+|.+|.+.+.+..+||.|+- +.+.|
T Consensus 75 ~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~-~~~~V~~v~~~~V~vD~NHPLAG-k~L~F 132 (171)
T 2k8i_A 75 LVQRVPKDVFMGVDELQVGMRFLAETDQGP-VPVEITAVEDDHVVVDGNHMLAG-QNLKF 132 (171)
T ss_dssp SEEEEEGGGGTTSSCCCTTCEEEEEETTEE-EEEEEEEECSSEEEEESCCSSCC-CEEEE
T ss_pred hEEEeeHHHCCcccCccCCcEEEEECCCCc-EEEEEEEEcCCEEEEeCCCCCCC-CeEEE
Confidence 444455444432 35678999988777765 89999999999999999988754 44444
No 321
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=22.61 E-value=18 Score=32.88 Aligned_cols=58 Identities=19% Similarity=0.327 Sum_probs=42.1
Q ss_pred eEEEEeccCceEE-EEEcCCeEEEEEecCCCeeeeEEEEeecCcEEEEEEeecccCCccch
Q 016020 219 TMLYSISDKHVQE-IKISPGIMLLIFNRSSSHVPLKILSIEDGTVLKVFYHLLHRNKKVDF 278 (396)
Q Consensus 219 s~lysIs~~~VqE-IkiSpg~~Ll~~q~~~~~iplkIl~IetG~~l~s~~~~L~~sk~i~F 278 (396)
+++..++-+.+.. ..+-+|+++.+..+.. .+|.+|.+|.+.+.+..+||+|+= +.+.|
T Consensus 74 ~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G-~~~~~V~~v~~~~V~vD~NHPLAG-k~L~F 132 (196)
T 2kfw_A 74 NLVQRVPKDVFMGVDELQVGMRFLAETDQG-PVPVEITAVEDDHVVVDGNHMLAG-QNLKF 132 (196)
T ss_dssp TTCEEECGGGCCCSSCCCTTCEEEEEETTE-EEEEEBCCCCSSSEEECCCCTTSC-CCCEE
T ss_pred hhEEEEEHHHCCCccCcccCCEEEEECCCC-cEEEEEEEEcCCEEEEeCCCCCCC-CeEEE
Confidence 3455555555543 3577899987766655 789999999999999999988754 44443
No 322
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=22.59 E-value=1.3e+02 Score=23.94 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=32.0
Q ss_pred cceeeEeecCCeeeEEEcccceEEEecccccCCC-ceEEEeecCeEEEEEEcCeEEEEecc
Q 016020 283 NEKLLVKQENENLQILDVRNAELMEVSRTEFMTP-SAFIFLYENQLFLTFRNRTVAVWNFR 342 (396)
Q Consensus 283 ~ekLLIKQed~~L~I~Dv~~~ki~~v~~t~~~~P-sAFiFly~~qLFLTfs~gti~iWd~~ 342 (396)
+.+-|.=|.|++|.+||- +.+=...+....+ ....+..+++|.|.-.++. .+|...
T Consensus 24 g~~~L~~q~dGnLvl~~~---~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~-~iW~S~ 80 (110)
T 3r0e_B 24 KNHQLVMQGDCNLVLYGG---KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFK-TIWSSR 80 (110)
T ss_dssp SSCEEEECTTSCEEEECS---SSCEECCCTTSSSSCEEEECTTSCEEEECTTCC-EEEECC
T ss_pred CCEEEEEcCCCeEEEECC---eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCC-EEEEcC
Confidence 345666688889999875 2333444443222 3455666777766544444 366543
No 323
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=21.83 E-value=5.6e+02 Score=24.95 Aligned_cols=83 Identities=6% Similarity=0.098 Sum_probs=53.3
Q ss_pred cCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce-EEEEeccC--------ceEEEEE----cCCeEEEEEecC-----
Q 016020 185 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISDK--------HVQEIKI----SPGIMLLIFNRS----- 246 (396)
Q Consensus 185 l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs-~lysIs~~--------~VqEIki----Spg~~Ll~~q~~----- 246 (396)
-.+|.=+.||+..|+...++.-.+.+-+||..+.. ....+++. .+.-|.+ .+|.++.++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34789999999999999999999999999998443 22255432 3567777 345555443310
Q ss_pred -----CCeeeeEEEEee---cCcEEEEEE
Q 016020 247 -----SSHVPLKILSIE---DGTVLKVFY 267 (396)
Q Consensus 247 -----~~~iplkIl~Ie---tG~~l~s~~ 267 (396)
+..--+..+|+. ||+.+..+.
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~d 120 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVN 120 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEec
Confidence 012335555666 666666555
No 324
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=21.76 E-value=5.1e+02 Score=25.15 Aligned_cols=118 Identities=19% Similarity=0.289 Sum_probs=71.0
Q ss_pred EEeeccchhhhhhccccceee-----e--ccccceEEEecCCCCceEEEEeeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 016020 93 EIVAARDIVFALAHSGVCAAF-----S--RETNRRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTKI 165 (396)
Q Consensus 93 EIv~a~dii~~L~~sG~c~af-----~--~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 165 (396)
+.++-+++++.|++.|+...- . +..|+-+--++-..+..+..+|.=..++.|++++ +.=++..++.
T Consensus 2 dlI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT-------~~G~~~~~~~ 74 (370)
T 3l6v_A 2 DLIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFT-------SSGKVFWLPV 74 (370)
T ss_dssp CCCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEE-------TTSEEEEEEG
T ss_pred CcccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEe-------CCCeEEEEEH
Confidence 456778999999999997763 2 2223445566666555555577776888888866 4446667777
Q ss_pred hhhhhCC-CCCCCcceee------cccCCCCeE-EeeCCCCcEEEeecCCCeEEEEeccCce
Q 016020 166 EYIRRGK-PDSGFALFES------ESLKWPGFV-EFDDVNGKVLTYSAQDSIYKVFDLKNYT 219 (396)
Q Consensus 166 ~~i~~gk-~~~~~~LF~~------~~l~~PgfV-EFDd~NgkIlt~~a~d~~YrVwdlknYs 219 (396)
.+|..+. ...|.|+-.- +.+..=--+ +|++ +.-+..-...|..|-..+..|.
T Consensus 75 ~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~--~~~ll~~T~~G~vKrt~l~e~~ 134 (370)
T 3l6v_A 75 HQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYAD--NRYVFMATRNGTVKKTPLSEFA 134 (370)
T ss_dssp GGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCT--TCEEEEEETTSEEEEEEGGGGC
T ss_pred HHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCC--CcEEEEEeCCCeEEEeEHHHhh
Confidence 7775543 3556655432 222210001 2333 3334444567888888888776
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=21.55 E-value=5.8e+02 Score=24.97 Aligned_cols=52 Identities=6% Similarity=0.158 Sum_probs=35.8
Q ss_pred ccCCCCeEEeeCCCCcEEEeecCCCeEEEEeccCce--EEEEecc--------CceEEEEEcC
Q 016020 184 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISD--------KHVQEIKISP 236 (396)
Q Consensus 184 ~l~~PgfVEFDd~NgkIlt~~a~d~~YrVwdlknYs--~lysIs~--------~~VqEIkiSp 236 (396)
-|.+|--+.|++ +|+++..+...+.+++++..+.+ .+..+.+ .....|.++|
T Consensus 25 ~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 25 NLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp CCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred CCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC
Confidence 388999999999 89999988776656666665543 3334443 2344788885
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=21.47 E-value=1.9e+02 Score=31.47 Aligned_cols=55 Identities=16% Similarity=0.249 Sum_probs=36.4
Q ss_pred CCCeEEEEeccCceEEEEecc-------CceEEEEE--cCCeEEEEEecCCCeeeeEEEEeecC
Q 016020 206 QDSIYKVFDLKNYTMLYSISD-------KHVQEIKI--SPGIMLLIFNRSSSHVPLKILSIEDG 260 (396)
Q Consensus 206 ~d~~YrVwdlknYs~lysIs~-------~~VqEIki--Spg~~Ll~~q~~~~~iplkIl~IetG 260 (396)
.|...|||++.+.+++++.+= ++.....+ +++..+.++-++....-+++|.+..+
T Consensus 255 ~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~~~~ 318 (950)
T 4gq2_M 255 LDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKLNAN 318 (950)
T ss_dssp TTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEEEEC
T ss_pred CCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEEecC
Confidence 499999999999999998642 22222222 35566666666666666777766543
No 327
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.81 E-value=2.4e+02 Score=31.14 Aligned_cols=27 Identities=19% Similarity=0.287 Sum_probs=23.1
Q ss_pred hcceeeEeecCCeeeEEEcccceEEEe
Q 016020 282 FNEKLLVKQENENLQILDVRNAELMEV 308 (396)
Q Consensus 282 ~~ekLLIKQed~~L~I~Dv~~~ki~~v 308 (396)
...+|++=-.|..|||||+.+++|+.+
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 345777888999999999999999874
No 328
>2vnl_A Bifunctional tail protein, PIIGCN4; chimera, hydrolase, late protein, viral protein, phage P22 tailspike protein, mutant Y108WDEL; 1.80A {Enterobacteria phage P22} PDB: 2vky_B
Probab=20.35 E-value=2.7e+02 Score=24.86 Aligned_cols=74 Identities=18% Similarity=0.352 Sum_probs=49.4
Q ss_pred cchhhhhcceeeEeecCCe-------eeEEEc-ccceEEE-----ecccccCCCceEEEeecCeE--EEEEEcCeEEEEe
Q 016020 276 VDFIEQFNEKLLVKQENEN-------LQILDV-RNAELME-----VSRTEFMTPSAFIFLYENQL--FLTFRNRTVAVWN 340 (396)
Q Consensus 276 i~FiE~~~ekLLIKQed~~-------L~I~Dv-~~~ki~~-----v~~t~~~~PsAFiFly~~qL--FLTfs~gti~iWd 340 (396)
-+|-+.++.||+|+.-|-- |++|=- .+++... +.+... -|+|+++| |+|.+..+-.+||
T Consensus 20 ~~F~a~~~GKiyiGk~dtDp~~~~Nqi~vy~~n~~g~~~qv~qPivin~ag------~fv~ng~l~~~vt~~ghsmavYd 93 (151)
T 2vnl_A 20 RSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQITQPLIINAAG------KIVYNGQLVKIVTVQGHSMAIYD 93 (151)
T ss_dssp SSSSBCTTCEEEEESTTSCTTSGGGBCCEEEECTTSCEEEECSSEEECTTS------CEEETTEECCEECCSSCEEEEEC
T ss_pred HHHHHhccCcEEeccCCCCCCCcccccceEEecCCCceeeeecceeeecCC------ceeeCCEEEEEeccCCCcceEEe
Confidence 4688889999999985543 444411 1133332 222222 37799999 8898999999999
Q ss_pred cccceeeeecccccc
Q 016020 341 FRGELVTSFEDHLLW 355 (396)
Q Consensus 341 ~~geL~t~fedh~l~ 355 (396)
-.|.+.-.+-+-.-|
T Consensus 94 ~~Gaq~f~iP~v~~~ 108 (151)
T 2vnl_A 94 ANGSQVDYIANVLKW 108 (151)
T ss_dssp TTSCEEEEESCGGGG
T ss_pred cCCCceeeecccccC
Confidence 999876666555444
No 329
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=20.18 E-value=6.3e+02 Score=24.85 Aligned_cols=47 Identities=17% Similarity=0.411 Sum_probs=35.1
Q ss_pred ecCeEEEEEEc-CeEEEEeccc--------ceeeeeccccccCCC---CCCCcEEEccCC
Q 016020 323 YENQLFLTFRN-RTVAVWNFRG--------ELVTSFEDHLLWHPD---CNTNNIYITSDQ 370 (396)
Q Consensus 323 y~~qLFLTfs~-gti~iWd~~g--------eL~t~fedh~l~~~~---c~~n~~~it~~q 370 (396)
.++.||++.-+ +.|..||.++ +++..=+ .+.|... -.++.+|++++|
T Consensus 285 ~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 285 KTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp TTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEECS
T ss_pred CCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEECc
Confidence 36889999888 8999999998 3344333 6777554 367888988888
Done!