Query 016021
Match_columns 396
No_of_seqs 289 out of 1483
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 06:32:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016021.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016021hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1igna1 a.4.1.6 (A:360-445) DN 99.7 3.3E-20 2.4E-24 149.7 -5.3 69 14-83 1-74 (86)
2 d1gvda_ a.4.1.3 (A:) c-Myb, DN 99.7 1.3E-18 9.4E-23 127.9 3.5 52 12-64 1-52 (52)
3 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.7 7.4E-18 5.4E-22 122.6 2.7 50 14-64 1-50 (50)
4 d1gv2a2 a.4.1.3 (A:144-190) c- 99.6 1.5E-16 1.1E-20 114.6 6.2 47 67-113 1-47 (47)
5 d1gvda_ a.4.1.3 (A:) c-Myb, DN 99.6 1.2E-16 8.8E-21 117.2 5.7 50 65-114 1-51 (52)
6 d1igna1 a.4.1.6 (A:360-445) DN 99.6 1E-16 7.4E-21 129.0 3.6 67 67-133 1-73 (86)
7 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.6 1.8E-15 1.3E-19 109.7 6.1 48 67-114 1-49 (50)
8 d2ckxa1 a.4.1.3 (A:578-660) Te 99.6 3.8E-16 2.7E-20 124.4 2.2 73 16-91 2-82 (83)
9 d1w0ua_ a.4.1.4 (A:) Telomeric 99.5 1.3E-15 9.4E-20 112.7 2.4 53 13-66 1-55 (55)
10 d1w0ua_ a.4.1.4 (A:) Telomeric 99.4 4.1E-14 3E-18 104.5 6.0 51 66-116 1-54 (55)
11 d1w0ta_ a.4.1.4 (A:) DNA-bindi 99.4 5.9E-14 4.3E-18 102.6 6.4 48 66-113 1-51 (52)
12 d1w0ta_ a.4.1.4 (A:) DNA-bindi 99.4 1.4E-14 1E-18 105.9 2.3 49 13-61 1-50 (52)
13 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 99.4 7.4E-14 5.4E-18 105.4 6.4 58 67-124 2-59 (65)
14 d1x41a1 a.4.1.1 (A:8-54) Trans 99.4 1.1E-14 7.7E-19 104.6 1.6 44 16-60 3-46 (47)
15 d1gv2a2 a.4.1.3 (A:144-190) c- 99.4 2.7E-14 2E-18 102.6 2.7 47 14-62 1-47 (47)
16 d1x41a1 a.4.1.1 (A:8-54) Trans 99.3 4.5E-13 3.2E-17 96.0 5.1 43 69-111 3-46 (47)
17 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.3 1E-12 7.5E-17 98.1 6.8 50 62-111 7-60 (60)
18 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.3 4.7E-13 3.4E-17 100.0 3.6 51 8-59 6-59 (60)
19 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 99.3 1.1E-13 8E-18 104.4 -0.2 59 14-74 2-60 (65)
20 d2ckxa1 a.4.1.3 (A:578-660) Te 99.2 6.5E-12 4.8E-16 99.5 7.8 54 68-121 1-59 (83)
21 d2cjja1 a.4.1.3 (A:8-70) Radia 99.2 5.6E-12 4.1E-16 94.9 6.7 47 68-114 2-52 (63)
22 d1ug2a_ a.4.1.3 (A:) 2610100b2 99.2 6.2E-12 4.5E-16 102.5 6.8 69 47-115 13-84 (95)
23 d2cjja1 a.4.1.3 (A:8-70) Radia 99.1 4.9E-12 3.6E-16 95.2 1.9 44 15-59 2-48 (63)
24 d1xc5a1 a.4.1.3 (A:413-480) Nu 99.1 3.9E-11 2.9E-15 91.3 4.7 47 66-112 16-62 (68)
25 d2iw5b1 a.4.1.3 (B:376-440) RE 99.1 4.7E-11 3.4E-15 90.0 4.9 47 67-113 5-51 (65)
26 d2iw5b1 a.4.1.3 (B:376-440) RE 98.9 2.3E-10 1.7E-14 86.2 2.0 47 14-62 5-51 (65)
27 d1xc5a1 a.4.1.3 (A:413-480) Nu 98.9 2.6E-10 1.9E-14 86.7 1.8 50 10-61 13-62 (68)
28 d1ug2a_ a.4.1.3 (A:) 2610100b2 98.8 1.1E-09 8.1E-14 89.0 3.0 54 6-60 25-80 (95)
29 d2crga1 a.4.1.3 (A:8-64) Metas 98.0 3.6E-06 2.6E-10 61.6 6.2 45 68-112 2-47 (57)
30 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 98.0 1.8E-06 1.3E-10 64.2 4.4 46 68-114 2-51 (59)
31 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 97.6 7.4E-06 5.4E-10 60.7 1.7 44 15-60 2-48 (59)
32 d2crga1 a.4.1.3 (A:8-64) Metas 97.6 1.4E-05 1E-09 58.4 2.3 43 16-60 3-46 (57)
33 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 97.1 0.00037 2.7E-08 51.3 5.5 47 67-113 2-58 (59)
34 d1x58a1 a.4.1.1 (A:8-56) Hypot 97.0 0.00087 6.4E-08 46.8 6.2 45 67-111 1-48 (49)
35 d1irza_ a.4.1.11 (A:) Arr10-B 96.5 0.0021 1.5E-07 47.9 5.9 45 67-111 7-56 (64)
36 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 96.5 0.0008 5.9E-08 49.5 3.1 48 14-62 2-58 (59)
37 d1irza_ a.4.1.11 (A:) Arr10-B 95.9 0.0019 1.4E-07 48.1 2.7 50 11-60 4-56 (64)
38 d1wgxa_ a.4.1.3 (A:) Hypotheti 95.5 0.013 9.5E-07 44.2 6.0 50 66-115 7-60 (73)
39 d1wgxa_ a.4.1.3 (A:) Hypotheti 94.8 0.0062 4.5E-07 46.0 2.4 50 13-63 7-59 (73)
40 d1ofcx2 a.4.1.13 (X:851-978) S 90.6 0.17 1.2E-05 41.9 5.6 67 51-117 31-115 (128)
41 d1ofcx1 a.4.1.3 (X:799-850) SA 90.0 0.44 3.2E-05 33.6 6.5 44 69-112 1-45 (52)
42 d1x58a1 a.4.1.1 (A:8-56) Hypot 87.7 0.12 8.8E-06 35.7 2.0 44 15-59 2-47 (49)
43 d1ofcx1 a.4.1.3 (X:799-850) SA 62.1 2.3 0.00017 29.7 2.6 39 16-55 1-39 (52)
44 d1ofcx2 a.4.1.13 (X:851-978) S 60.6 2.7 0.0002 34.4 3.2 32 11-42 46-80 (128)
45 d1rp3a2 a.4.13.2 (A:164-234) S 55.1 8.4 0.00061 26.5 4.8 42 73-115 24-65 (71)
46 d2cg4a1 a.4.5.32 (A:4-66) Regu 49.8 8.9 0.00065 26.6 4.1 45 73-118 5-50 (63)
47 d2cyya1 a.4.5.32 (A:5-64) Puta 47.0 2 0.00015 29.9 0.1 45 20-66 3-47 (60)
48 d1kkxa_ a.4.3.1 (A:) Transcrip 45.9 6.6 0.00048 30.1 3.1 40 78-117 39-86 (102)
49 d2cyya1 a.4.5.32 (A:5-64) Puta 44.3 23 0.0017 24.0 5.6 45 73-118 3-48 (60)
50 d1c20a_ a.4.3.1 (A:) DNA-bindi 44.1 13 0.00093 29.4 4.8 40 76-115 55-107 (128)
51 d2cfxa1 a.4.5.32 (A:1-63) Tran 42.2 10 0.00074 26.4 3.4 45 73-118 5-50 (63)
52 d2cg4a1 a.4.5.32 (A:4-66) Regu 41.6 2.2 0.00016 29.9 -0.4 43 20-64 5-47 (63)
53 d2cfxa1 a.4.5.32 (A:1-63) Tran 40.6 2.3 0.00016 30.0 -0.5 44 20-65 5-48 (63)
54 d1ryua_ a.4.3.1 (A:) SWI-SNF c 37.0 21 0.0015 27.9 5.0 39 77-115 54-104 (120)
55 d1or7a1 a.4.13.2 (A:120-187) S 36.1 26 0.0019 23.9 4.9 41 73-114 21-61 (68)
56 d1i1ga1 a.4.5.32 (A:2-61) LprA 35.9 33 0.0024 23.3 5.3 46 73-119 3-49 (60)
57 d1i1ga1 a.4.5.32 (A:2-61) LprA 32.9 4.5 0.00033 28.1 0.1 45 20-66 3-47 (60)
58 d1ryua_ a.4.3.1 (A:) SWI-SNF c 32.0 7.6 0.00056 30.6 1.4 40 24-63 54-103 (120)
59 d1ig6a_ a.4.3.1 (A:) MRF-2 DNA 31.2 11 0.00083 28.8 2.3 39 76-114 36-87 (107)
60 d1ig6a_ a.4.3.1 (A:) MRF-2 DNA 30.1 6.5 0.00047 30.3 0.6 41 23-63 36-87 (107)
61 d2bgxa1 a.20.1.1 (A:180-260) P 25.8 28 0.002 25.8 3.6 67 16-87 15-81 (81)
62 d1c20a_ a.4.3.1 (A:) DNA-bindi 25.5 5.3 0.00039 31.8 -0.7 40 24-63 56-106 (128)
No 1
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.71 E-value=3.3e-20 Score=149.69 Aligned_cols=69 Identities=19% Similarity=0.236 Sum_probs=64.0
Q ss_pred ccCCCHHHHHHHHHHHHHhCCC-----CceecccccccccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHH
Q 016021 14 KGLWSPEEDEKLYNYITRFGVG-----CWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHE 83 (396)
Q Consensus 14 Kg~WT~EEDe~L~~lV~kyG~~-----nW~~IAk~mg~gRt~kQCReRW~n~L~P~lkkg~WT~EED~~Llelv~ 83 (396)
|++||+|||++|+++|.+||.. +|..||+.|+ |||++|||+||.++|+|.+++++||.+||.+|+.+..
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lp-gRt~~qcr~Rw~~~L~p~l~~~~~t~~ed~ll~d~~~ 74 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVP-NHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDG 74 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTST-TSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCTTS
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcC-CCCHHHHHHHHHHHcCccccCCCCCCchhHHHHHHhh
Confidence 6899999999999999999864 4999999998 9999999999999999999999999999998876543
No 2
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.3e-18 Score=127.87 Aligned_cols=52 Identities=42% Similarity=0.857 Sum_probs=49.9
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCC
Q 016021 12 LRKGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPD 64 (396)
Q Consensus 12 ikKg~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~ 64 (396)
++||+||+|||++|+++|++||.++|..||+.|+ +||+.||++||.++|+|.
T Consensus 1 l~rg~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~-~Rt~~qc~~Rw~~~L~P~ 52 (52)
T d1gvda_ 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPE 52 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTST-TCCHHHHHHHHHHTTSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC-CCCHHHHHHHHHhhCCCC
Confidence 5799999999999999999999889999999998 999999999999999984
No 3
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=7.4e-18 Score=122.58 Aligned_cols=50 Identities=32% Similarity=0.678 Sum_probs=48.0
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCC
Q 016021 14 KGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPD 64 (396)
Q Consensus 14 Kg~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~ 64 (396)
|++||+|||++|+++|++||.++|..||+.|+ +|++.||++||.++|+|.
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~L~P~ 50 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLP-NRTDVQCQHRWQKVLNPE 50 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTST-TCCHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC-CCCHHHHHHHHHhhCCCC
Confidence 67899999999999999999989999999998 999999999999999984
No 4
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=1.5e-16 Score=114.57 Aligned_cols=47 Identities=51% Similarity=0.973 Sum_probs=45.1
Q ss_pred CCCCCHHHHHHHHHHHHHhCCchhhhhhcCCCCCHHHHHHHHHHHhh
Q 016021 67 RGMFSQQEEDLIISLHEVLGNRWAQIASQLPGRTDNEIKNFWNSCLK 113 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G~kW~~IAk~LpGRT~~qcRnRW~~~Lk 113 (396)
|++||+|||++|+++|++||++|..||+.|||||+++||+||+.++|
T Consensus 1 K~~WT~eED~~L~~~v~~~G~~W~~Ia~~~~gRt~~~~knr~~~~lr 47 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMR 47 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSCHHHHHTTCTTCCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHhhHHHHHHhHcCCCCHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999999999999998875
No 5
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=1.2e-16 Score=117.19 Aligned_cols=50 Identities=30% Similarity=0.666 Sum_probs=47.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHhC-CchhhhhhcCCCCCHHHHHHHHHHHhhh
Q 016021 65 LKRGMFSQQEEDLIISLHEVLG-NRWAQIASQLPGRTDNEIKNFWNSCLKK 114 (396)
Q Consensus 65 lkkg~WT~EED~~Llelv~~~G-~kW~~IAk~LpGRT~~qcRnRW~~~Lkk 114 (396)
++||+||+|||++|+++|.+|| ++|..||+.|+|||+.||++||.++|+|
T Consensus 1 l~rg~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qc~~Rw~~~L~P 51 (52)
T d1gvda_ 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNP 51 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCCC
Confidence 5799999999999999999999 6899999999999999999999999876
No 6
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.60 E-value=1e-16 Score=129.02 Aligned_cols=67 Identities=21% Similarity=0.289 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCCc------hhhhhhcCCCCCHHHHHHHHHHHhhhhhhhCCCCcCCcchhHHHH
Q 016021 67 RGMFSQQEEDLIISLHEVLGNR------WAQIASQLPGRTDNEIKNFWNSCLKKKLMKQGIDPATHKPIADII 133 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G~k------W~~IAk~LpGRT~~qcRnRW~~~Lkk~lkk~~~s~eEd~~L~~iv 133 (396)
|++||+|||++|+++|.+||.+ |.+||+.|||||+.|||+||+++|.+.+++..|+.+++..+.+..
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lpgRt~~qcr~Rw~~~L~p~l~~~~~t~~ed~ll~d~~ 73 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDD 73 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCTT
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcCCCCHHHHHHHHHHHcCccccCCCCCCchhHHHHHHh
Confidence 5799999999999999999965 999999999999999999999999999999999999999885543
No 7
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=1.8e-15 Score=109.71 Aligned_cols=48 Identities=29% Similarity=0.587 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHHHHHHhC-CchhhhhhcCCCCCHHHHHHHHHHHhhh
Q 016021 67 RGMFSQQEEDLIISLHEVLG-NRWAQIASQLPGRTDNEIKNFWNSCLKK 114 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G-~kW~~IAk~LpGRT~~qcRnRW~~~Lkk 114 (396)
|++||+|||++|+++|.+|| ++|.+||+.|+|||+.||++||.++|.|
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P 49 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNP 49 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCCC
Confidence 57899999999999999999 5799999999999999999999999976
No 8
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.55 E-value=3.8e-16 Score=124.43 Aligned_cols=73 Identities=23% Similarity=0.376 Sum_probs=60.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceeccccc---ccccccccchhhhhhcc-----CCCCCCCCCCHHHHHHHHHHHHHhCC
Q 016021 16 LWSPEEDEKLYNYITRFGVGCWSSVPKLA---GLQRCGKSCRLRWINYL-----RPDLKRGMFSQQEEDLIISLHEVLGN 87 (396)
Q Consensus 16 ~WT~EEDe~L~~lV~kyG~~nW~~IAk~m---g~gRt~kQCReRW~n~L-----~P~lkkg~WT~EED~~Llelv~~~G~ 87 (396)
+||+|||++|+++|++||.++|..|++.+ ..+|++.||++||+++| .+..+++.|+++| |+..|.+++.
T Consensus 2 ~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~~~~~~~~~~~~~~~p~e---ll~~v~~~~~ 78 (83)
T d2ckxa1 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQD---LLDRVLAAHA 78 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCSSCCCHH---HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHHHHHhhhhccCcccccCCCCCHH---HHHHHHHHHH
Confidence 79999999999999999998999999753 23899999999999998 4677889999877 4555555556
Q ss_pred chhh
Q 016021 88 RWAQ 91 (396)
Q Consensus 88 kW~~ 91 (396)
+|.+
T Consensus 79 ~wsq 82 (83)
T d2ckxa1 79 YWSQ 82 (83)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7753
No 9
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.3e-15 Score=112.68 Aligned_cols=53 Identities=25% Similarity=0.476 Sum_probs=48.4
Q ss_pred CccCCCHHHHHHHHHHHHHhCCCCceecccc--cccccccccchhhhhhccCCCCC
Q 016021 13 RKGLWSPEEDEKLYNYITRFGVGCWSSVPKL--AGLQRCGKSCRLRWINYLRPDLK 66 (396)
Q Consensus 13 kKg~WT~EEDe~L~~lV~kyG~~nW~~IAk~--mg~gRt~kQCReRW~n~L~P~lk 66 (396)
++++||+|||++|+++|++||.++|..||+. ++ +|++.||++||+++++++++
T Consensus 1 Kr~~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~-~Rt~~q~k~Rwrn~~k~~~N 55 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFV-NRTAVMIKDRWRTMKRLGMN 55 (55)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCS-SCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCChHHHHHhhcCCC-CcCHHHHHHHHHHHhcCCCC
Confidence 5789999999999999999999899999986 44 89999999999999998764
No 10
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=4.1e-14 Score=104.46 Aligned_cols=51 Identities=22% Similarity=0.424 Sum_probs=46.6
Q ss_pred CCCCCCHHHHHHHHHHHHHhC-Cchhhhhhc--CCCCCHHHHHHHHHHHhhhhh
Q 016021 66 KRGMFSQQEEDLIISLHEVLG-NRWAQIASQ--LPGRTDNEIKNFWNSCLKKKL 116 (396)
Q Consensus 66 kkg~WT~EED~~Llelv~~~G-~kW~~IAk~--LpGRT~~qcRnRW~~~Lkk~l 116 (396)
++++||+|||++|+++|++|| ++|..||+. +++||+.||++||++++++.+
T Consensus 1 Kr~~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~Rt~~q~k~Rwrn~~k~~~ 54 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGM 54 (55)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCChHHHHHhhcCCCCcCHHHHHHHHHHHhcCCC
Confidence 578999999999999999999 589999997 569999999999999988764
No 11
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=5.9e-14 Score=102.56 Aligned_cols=48 Identities=25% Similarity=0.391 Sum_probs=43.8
Q ss_pred CCCCCCHHHHHHHHHHHHHhCC-chhhhhhcC--CCCCHHHHHHHHHHHhh
Q 016021 66 KRGMFSQQEEDLIISLHEVLGN-RWAQIASQL--PGRTDNEIKNFWNSCLK 113 (396)
Q Consensus 66 kkg~WT~EED~~Llelv~~~G~-kW~~IAk~L--pGRT~~qcRnRW~~~Lk 113 (396)
++++||+|||+.|+++|.+||. +|..|++.+ .|||+.||++||.+++|
T Consensus 1 kr~~WT~eED~~L~~~v~~~G~~~W~~I~~~~~~~~Rt~~q~r~Rw~nl~K 51 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHhhcCCCCCCHHHHHHHHHHHHC
Confidence 5789999999999999999995 899999885 59999999999998765
No 12
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.4e-14 Score=105.92 Aligned_cols=49 Identities=24% Similarity=0.441 Sum_probs=44.1
Q ss_pred CccCCCHHHHHHHHHHHHHhCCCCceecccccc-cccccccchhhhhhcc
Q 016021 13 RKGLWSPEEDEKLYNYITRFGVGCWSSVPKLAG-LQRCGKSCRLRWINYL 61 (396)
Q Consensus 13 kKg~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg-~gRt~kQCReRW~n~L 61 (396)
++++||+|||++|+++|++||.++|..||+.++ .+|++.||++||.++.
T Consensus 1 kr~~WT~eED~~L~~~v~~~G~~~W~~I~~~~~~~~Rt~~q~r~Rw~nl~ 50 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 50 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHhhcCCCCCCHHHHHHHHHHHH
Confidence 578999999999999999999989999998643 3899999999999865
No 13
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=7.4e-14 Score=105.39 Aligned_cols=58 Identities=19% Similarity=0.272 Sum_probs=51.6
Q ss_pred CCCCCHHHHHHHHHHHHHhCCchhhhhhcCCCCCHHHHHHHHHHHhhhhhhhCCCCcC
Q 016021 67 RGMFSQQEEDLIISLHEVLGNRWAQIASQLPGRTDNEIKNFWNSCLKKKLMKQGIDPA 124 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G~kW~~IAk~LpGRT~~qcRnRW~~~Lkk~lkk~~~s~e 124 (396)
...||+|||.+|++++..||.+|..||+.|||||+.||++||+.++++..+.......
T Consensus 2 ~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~ry~~~~~~~~k~~~~~~~ 59 (65)
T d2cu7a1 2 SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKET 59 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHHHHHSCSCTTCCC
T ss_pred CCCCCHHHHHHHHHHHHHhcchHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 3579999999999999999999999999999999999999999999987766554433
No 14
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.1e-14 Score=104.63 Aligned_cols=44 Identities=20% Similarity=0.594 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhc
Q 016021 16 LWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINY 60 (396)
Q Consensus 16 ~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~ 60 (396)
.||+|||++|+++|++||.++|..||+.|+ +||+.|||.||.++
T Consensus 3 ~Wt~eEd~~L~~~v~~~G~~nW~~Ia~~~~-~Rt~~Qcr~r~~~~ 46 (47)
T d1x41a1 3 SWTAQEEMALLEAVMDCGFGNWQDVANQMC-TKTKEECEKHYMKY 46 (47)
T ss_dssp SSCHHHHHHHHHHHHHTCTTCHHHHHHHHT-TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCccHHHHHHHcC-CCCHHHHHHHHHHh
Confidence 499999999999999999999999999999 99999999999986
No 15
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.41 E-value=2.7e-14 Score=102.58 Aligned_cols=47 Identities=30% Similarity=0.617 Sum_probs=43.9
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccC
Q 016021 14 KGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLR 62 (396)
Q Consensus 14 Kg~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~ 62 (396)
|++||+|||++|+++|++||. +|..||+.|+ +||+.||+.||.++|.
T Consensus 1 K~~WT~eED~~L~~~v~~~G~-~W~~Ia~~~~-gRt~~~~knr~~~~lr 47 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGN-RWAEIAKLLP-GRTDNAIKNHWNSTMR 47 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSS-CHHHHHTTCT-TCCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHhh-HHHHHHhHcC-CCCHHHHHHHHHHHcC
Confidence 679999999999999999996 5999999998 9999999999998763
No 16
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=4.5e-13 Score=95.99 Aligned_cols=43 Identities=21% Similarity=0.372 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHhC-CchhhhhhcCCCCCHHHHHHHHHHH
Q 016021 69 MFSQQEEDLIISLHEVLG-NRWAQIASQLPGRTDNEIKNFWNSC 111 (396)
Q Consensus 69 ~WT~EED~~Llelv~~~G-~kW~~IAk~LpGRT~~qcRnRW~~~ 111 (396)
.||.|||.+|+++|.+|| ++|..||+.|+|||+.|||.||.++
T Consensus 3 ~Wt~eEd~~L~~~v~~~G~~nW~~Ia~~~~~Rt~~Qcr~r~~~~ 46 (47)
T d1x41a1 3 SWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKY 46 (47)
T ss_dssp SSCHHHHHHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCccHHHHHHHcCCCCHHHHHHHHHHh
Confidence 599999999999999999 5799999999999999999999875
No 17
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1e-12 Score=98.07 Aligned_cols=50 Identities=14% Similarity=0.264 Sum_probs=45.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCC----chhhhhhcCCCCCHHHHHHHHHHH
Q 016021 62 RPDLKRGMFSQQEEDLIISLHEVLGN----RWAQIASQLPGRTDNEIKNFWNSC 111 (396)
Q Consensus 62 ~P~lkkg~WT~EED~~Llelv~~~G~----kW~~IAk~LpGRT~~qcRnRW~~~ 111 (396)
.+...+++||+|||.+|+++|.+||. +|.+||+.|||||+.||++||..+
T Consensus 7 ~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~~Rt~~qc~~R~~~L 60 (60)
T d2cqra1 7 RARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLL 60 (60)
T ss_dssp TTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHH
T ss_pred cCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 45667889999999999999999995 599999999999999999999754
No 18
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=4.7e-13 Score=99.95 Aligned_cols=51 Identities=14% Similarity=0.458 Sum_probs=46.5
Q ss_pred ccCCCCccCCCHHHHHHHHHHHHHhCCC---Cceecccccccccccccchhhhhh
Q 016021 8 VKQKLRKGLWSPEEDEKLYNYITRFGVG---CWSSVPKLAGLQRCGKSCRLRWIN 59 (396)
Q Consensus 8 lkpkikKg~WT~EEDe~L~~lV~kyG~~---nW~~IAk~mg~gRt~kQCReRW~n 59 (396)
.+++..+++||+|||++|+++|.+||.. +|..||+.|| +|++.||+.||+.
T Consensus 6 ~~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~-~Rt~~qc~~R~~~ 59 (60)
T d2cqra1 6 ERARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVP-SKSKEDCIARYKL 59 (60)
T ss_dssp CTTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCS-SSCHHHHHHHHHH
T ss_pred ccCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcC-CCCHHHHHHHHHH
Confidence 4577788999999999999999999976 4999999999 9999999999974
No 19
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.1e-13 Score=104.44 Aligned_cols=59 Identities=24% Similarity=0.428 Sum_probs=52.2
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCCCCCCCCCHHH
Q 016021 14 KGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQE 74 (396)
Q Consensus 14 Kg~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~lkkg~WT~EE 74 (396)
.++||+|||++|+++|.+|| .+|..||+.|+ +||+.||+.||.+++.+..+.+.+...+
T Consensus 2 ~~~WT~eEd~~l~~~~~~~G-~~W~~Ia~~~~-~Rt~~q~k~ry~~~~~~~~k~~~~~~~~ 60 (65)
T d2cu7a1 2 SVKWTIEEKELFEQGLAKFG-RRWTKISKLIG-SRTVLQVKSYARQYFKNKVKCGLDKETP 60 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHTC-SCHHHHHHHHS-SSCHHHHHHHHHHHHHHHSCSCTTCCCS
T ss_pred CCCCCHHHHHHHHHHHHHhc-chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 35799999999999999999 57999999999 9999999999999998877777665443
No 20
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.24 E-value=6.5e-12 Score=99.53 Aligned_cols=54 Identities=22% Similarity=0.405 Sum_probs=46.6
Q ss_pred CCCCHHHHHHHHHHHHHhCC-chhhhhhc----CCCCCHHHHHHHHHHHhhhhhhhCCC
Q 016021 68 GMFSQQEEDLIISLHEVLGN-RWAQIASQ----LPGRTDNEIKNFWNSCLKKKLMKQGI 121 (396)
Q Consensus 68 g~WT~EED~~Llelv~~~G~-kW~~IAk~----LpGRT~~qcRnRW~~~Lkk~lkk~~~ 121 (396)
.+||.|||++|+++|.+||. +|..|++. +++||+.|||+||+++|+.......+
T Consensus 1 r~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~~~~~~~~~ 59 (83)
T d2ckxa1 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQ 59 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGG
T ss_pred CCCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHHHHHhhhhccCccc
Confidence 38999999999999999995 89999975 68999999999999999865544333
No 21
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.23 E-value=5.6e-12 Score=94.92 Aligned_cols=47 Identities=26% Similarity=0.462 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHHHHhCC----chhhhhhcCCCCCHHHHHHHHHHHhhh
Q 016021 68 GMFSQQEEDLIISLHEVLGN----RWAQIASQLPGRTDNEIKNFWNSCLKK 114 (396)
Q Consensus 68 g~WT~EED~~Llelv~~~G~----kW~~IAk~LpGRT~~qcRnRW~~~Lkk 114 (396)
.+||+|||.+|++++++||. +|.+||..|||||+.||++||+.+++.
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~gRt~~qc~~r~~~L~~d 52 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 52 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 48999999999999999995 499999999999999999999766543
No 22
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.22 E-value=6.2e-12 Score=102.46 Aligned_cols=69 Identities=12% Similarity=0.191 Sum_probs=62.3
Q ss_pred ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHHHhCCc---hhhhhhcCCCCCHHHHHHHHHHHhhhh
Q 016021 47 QRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNR---WAQIASQLPGRTDNEIKNFWNSCLKKK 115 (396)
Q Consensus 47 gRt~kQCReRW~n~L~P~lkkg~WT~EED~~Llelv~~~G~k---W~~IAk~LpGRT~~qcRnRW~~~Lkk~ 115 (396)
..+..+.+.++.+..+++.+...||+|||++||+.++++|.+ |..||+.|+||+++|||+||..+++..
T Consensus 13 ~~t~~~v~A~n~~~~s~G~~~~~WTrEEDriIL~~~q~~G~~~~tw~~Ia~~L~~Rs~~qvr~Rf~~Lm~lf 84 (95)
T d1ug2a_ 13 KASEATVCANNSKVSSTGEKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQLF 84 (95)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CCCccccccccCccCCCCCccCCcCHHHHHHHHHHHHHcCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 577777888888888888888899999999999999999987 999999999999999999998887654
No 23
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.13 E-value=4.9e-12 Score=95.24 Aligned_cols=44 Identities=14% Similarity=0.354 Sum_probs=40.7
Q ss_pred cCCCHHHHHHHHHHHHHhCCCC---ceecccccccccccccchhhhhh
Q 016021 15 GLWSPEEDEKLYNYITRFGVGC---WSSVPKLAGLQRCGKSCRLRWIN 59 (396)
Q Consensus 15 g~WT~EEDe~L~~lV~kyG~~n---W~~IAk~mg~gRt~kQCReRW~n 59 (396)
.+||+|||++|+++|++||.++ |.+||+.|+ +||+.||+.||..
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~-gRt~~qc~~r~~~ 48 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVE-GRTPEEVKKHYEI 48 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHST-TCCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcC-CCCHHHHHHHHHH
Confidence 4799999999999999999764 999999999 9999999999954
No 24
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=3.9e-11 Score=91.30 Aligned_cols=47 Identities=21% Similarity=0.160 Sum_probs=43.5
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCchhhhhhcCCCCCHHHHHHHHHHHh
Q 016021 66 KRGMFSQQEEDLIISLHEVLGNRWAQIASQLPGRTDNEIKNFWNSCL 112 (396)
Q Consensus 66 kkg~WT~EED~~Llelv~~~G~kW~~IAk~LpGRT~~qcRnRW~~~L 112 (396)
...+||+||+.+|++++.+||.+|..||+.|||||..||+++|....
T Consensus 16 ~~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~~~rt~~q~~~~yy~~k 62 (68)
T d1xc5a1 16 VMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTK 62 (68)
T ss_dssp TTTCCCTTTHHHHHHHHHHTTSCSSSHHHHTTTSCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999997544
No 25
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=4.7e-11 Score=90.02 Aligned_cols=47 Identities=15% Similarity=0.318 Sum_probs=43.9
Q ss_pred CCCCCHHHHHHHHHHHHHhCCchhhhhhcCCCCCHHHHHHHHHHHhh
Q 016021 67 RGMFSQQEEDLIISLHEVLGNRWAQIASQLPGRTDNEIKNFWNSCLK 113 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G~kW~~IAk~LpGRT~~qcRnRW~~~Lk 113 (396)
..+||++||.+|++++..||.+|..||+.|||||..||++||....+
T Consensus 5 ~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~~~kt~~q~~~~y~~~~k 51 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRR 51 (65)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHHhCchHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 35799999999999999999999999999999999999999987654
No 26
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=2.3e-10 Score=86.16 Aligned_cols=47 Identities=19% Similarity=0.432 Sum_probs=42.8
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccC
Q 016021 14 KGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLR 62 (396)
Q Consensus 14 Kg~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~ 62 (396)
..+||++||++|.+++.+|| .+|..||+.|+ +|+..||+.||.++.+
T Consensus 5 ~~~WT~eE~~~f~~~~~~~G-~~w~~Ia~~~~-~kt~~q~~~~y~~~~k 51 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAIRKYG-RDFQAISDVIG-NKSVVQVKNFFVNYRR 51 (65)
T ss_dssp CSSCCHHHHHHHHHHHHHHS-SCHHHHHHHHS-SCCHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHHhC-chHHHHHHHcC-CCCHHHHHHHHHHHHh
Confidence 35699999999999999999 56999999999 9999999999988653
No 27
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=2.6e-10 Score=86.68 Aligned_cols=50 Identities=12% Similarity=0.250 Sum_probs=44.0
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhcc
Q 016021 10 QKLRKGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 (396)
Q Consensus 10 pkikKg~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L 61 (396)
++....+||+|||++|+++|.+|| .+|..||+.|+ +|+..||+.+|....
T Consensus 13 ~~~~~~~WT~eE~~~f~~~~~~~G-~~w~~Ia~~~~-~rt~~q~~~~yy~~k 62 (68)
T d1xc5a1 13 DRQVMNMWSEQEKETFREKFMQHP-KNFGLIASFLE-RKTVAECVLYYYLTK 62 (68)
T ss_dssp STTTTTCCCTTTHHHHHHHHHHTT-SCSSSHHHHTT-TSCHHHHHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHHHHHHHHC-CcHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 344557899999999999999999 56999999999 999999999997643
No 28
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.77 E-value=1.1e-09 Score=88.97 Aligned_cols=54 Identities=15% Similarity=0.227 Sum_probs=47.4
Q ss_pred ccccCCCCccCCCHHHHHHHHHHHHHhCCCC--ceecccccccccccccchhhhhhc
Q 016021 6 CCVKQKLRKGLWSPEEDEKLYNYITRFGVGC--WSSVPKLAGLQRCGKSCRLRWINY 60 (396)
Q Consensus 6 ~~lkpkikKg~WT~EEDe~L~~lV~kyG~~n--W~~IAk~mg~gRt~kQCReRW~n~ 60 (396)
...+++.+...||.|||+.|++.++++|... |..||+.|+ +|++.|||.||...
T Consensus 25 ~~~s~G~~~~~WTrEEDriIL~~~q~~G~~~~tw~~Ia~~L~-~Rs~~qvr~Rf~~L 80 (95)
T d1ug2a_ 25 KVSSTGEKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLG-NKTPVEVSHRFREL 80 (95)
T ss_dssp CCCCCCCCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHS-SCCHHHHHHHHHHH
T ss_pred ccCCCCCccCCcCHHHHHHHHHHHHHcCCcHHHHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 3445667788999999999999999999654 999999998 99999999999764
No 29
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.04 E-value=3.6e-06 Score=61.63 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCchhhhhhc-CCCCCHHHHHHHHHHHh
Q 016021 68 GMFSQQEEDLIISLHEVLGNRWAQIASQ-LPGRTDNEIKNFWNSCL 112 (396)
Q Consensus 68 g~WT~EED~~Llelv~~~G~kW~~IAk~-LpGRT~~qcRnRW~~~L 112 (396)
..||+||-.+..+++..||.+|..|++. +|+||..+|.+.|....
T Consensus 2 d~WT~eE~~~F~~~~~~yGKdf~~I~~~~v~~Ks~~~~v~fYY~~K 47 (57)
T d2crga1 2 EEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWK 47 (57)
T ss_dssp CCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcccHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 3799999999999999999999999985 69999999999987543
No 30
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.04 E-value=1.8e-06 Score=64.17 Aligned_cols=46 Identities=15% Similarity=0.289 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHHHHHHhC----CchhhhhhcCCCCCHHHHHHHHHHHhhh
Q 016021 68 GMFSQQEEDLIISLHEVLG----NRWAQIASQLPGRTDNEIKNFWNSCLKK 114 (396)
Q Consensus 68 g~WT~EED~~Llelv~~~G----~kW~~IAk~LpGRT~~qcRnRW~~~Lkk 114 (396)
+.||.+|+.+|.+++.+|. .+|.+||+.| |||..+|..||+.+...
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~v-gkt~~ev~~~~k~l~e~ 51 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQLKDS 51 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-TSCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 4799999999999999996 5699999999 99999999999765543
No 31
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.62 E-value=7.4e-06 Score=60.75 Aligned_cols=44 Identities=18% Similarity=0.353 Sum_probs=39.2
Q ss_pred cCCCHHHHHHHHHHHHHhCCC---Cceecccccccccccccchhhhhhc
Q 016021 15 GLWSPEEDEKLYNYITRFGVG---CWSSVPKLAGLQRCGKSCRLRWINY 60 (396)
Q Consensus 15 g~WT~EEDe~L~~lV~kyG~~---nW~~IAk~mg~gRt~kQCReRW~n~ 60 (396)
+.||++|+.+|.+++.+|+.+ .|.+||..+| |+..+|..||+..
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~vg--kt~~ev~~~~k~l 48 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELG--RSVTDVTTKAKQL 48 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHT--SCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHHC--CCHHHHHHHHHHH
Confidence 479999999999999999743 4999999996 9999999999764
No 32
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.55 E-value=1.4e-05 Score=58.42 Aligned_cols=43 Identities=12% Similarity=0.159 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceecccc-cccccccccchhhhhhc
Q 016021 16 LWSPEEDEKLYNYITRFGVGCWSSVPKL-AGLQRCGKSCRLRWINY 60 (396)
Q Consensus 16 ~WT~EEDe~L~~lV~kyG~~nW~~IAk~-mg~gRt~kQCReRW~n~ 60 (396)
.||+||-+++.+++..|| .+|..|++. ++ +|+..||...|...
T Consensus 3 ~WT~eE~~~F~~~~~~yG-Kdf~~I~~~~v~-~Ks~~~~v~fYY~~ 46 (57)
T d2crga1 3 EWSASEACLFEEALEKYG-KDFNDIRQDFLP-WKSLTSIIEYYYMW 46 (57)
T ss_dssp CCCHHHHHHHHHHHHHTC-SCHHHHHHTTCS-SSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHc-ccHHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 599999999999999999 579999985 56 99999999877643
No 33
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.08 E-value=0.00037 Score=51.33 Aligned_cols=47 Identities=17% Similarity=0.322 Sum_probs=40.6
Q ss_pred CCCCCHHHHHHHHHHHHHhC--------Cc-hhhhhh-cCCCCCHHHHHHHHHHHhh
Q 016021 67 RGMFSQQEEDLIISLHEVLG--------NR-WAQIAS-QLPGRTDNEIKNFWNSCLK 113 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G--------~k-W~~IAk-~LpGRT~~qcRnRW~~~Lk 113 (396)
|.+||.|||+.|++.|.++. +. |..+++ .+|.+|-...|+||...|+
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc
Confidence 56899999999999999873 22 999995 5799999999999988775
No 34
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.97 E-value=0.00087 Score=46.85 Aligned_cols=45 Identities=20% Similarity=0.437 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHHHHHHHhCCchhhhhhcC---CCCCHHHHHHHHHHH
Q 016021 67 RGMFSQQEEDLIISLHEVLGNRWAQIASQL---PGRTDNEIKNFWNSC 111 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G~kW~~IAk~L---pGRT~~qcRnRW~~~ 111 (396)
|..||+||-.-|...|+.+|+.|..|-=.+ |||+...+..+|..+
T Consensus 1 Rknft~eEv~YL~~GVK~~G~~WNsILWs~PF~~GR~~vdLA~Ky~~l 48 (49)
T d1x58a1 1 RKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRL 48 (49)
T ss_dssp SSSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHhcchhhhhhhccCCCCCchhhHHHHHHHhh
Confidence 357999999999999999999999996443 899999999999765
No 35
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.52 E-value=0.0021 Score=47.86 Aligned_cols=45 Identities=11% Similarity=0.201 Sum_probs=38.4
Q ss_pred CCCCCHHHHHHHHHHHHHhCCch---hhhhhc--CCCCCHHHHHHHHHHH
Q 016021 67 RGMFSQQEEDLIISLHEVLGNRW---AQIASQ--LPGRTDNEIKNFWNSC 111 (396)
Q Consensus 67 kg~WT~EED~~Llelv~~~G~kW---~~IAk~--LpGRT~~qcRnRW~~~ 111 (396)
+-.||+||-++.++++..+|..| ..|.+. ++|+|..||+.+-+.+
T Consensus 7 R~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKY 56 (64)
T d1irza_ 7 RVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp SCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 55799999999999999999887 466666 5999999999887655
No 36
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.45 E-value=0.0008 Score=49.47 Aligned_cols=48 Identities=19% Similarity=0.349 Sum_probs=39.5
Q ss_pred ccCCCHHHHHHHHHHHHHhCCC--------Cceeccc-ccccccccccchhhhhhccC
Q 016021 14 KGLWSPEEDEKLYNYITRFGVG--------CWSSVPK-LAGLQRCGKSCRLRWINYLR 62 (396)
Q Consensus 14 Kg~WT~EEDe~L~~lV~kyG~~--------nW~~IAk-~mg~gRt~kQCReRW~n~L~ 62 (396)
+.+||.|||+.|+++|.++... =|+.+++ .++ .++-.+-|+||.+.|.
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~-~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLT-QHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSS-SCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCC-CCCHHHHHHHHHHHhc
Confidence 4579999999999999998422 2999985 555 8999999999998874
No 37
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.90 E-value=0.0019 Score=48.12 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=37.4
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCCCc--eecccccc-cccccccchhhhhhc
Q 016021 11 KLRKGLWSPEEDEKLYNYITRFGVGCW--SSVPKLAG-LQRCGKSCRLRWINY 60 (396)
Q Consensus 11 kikKg~WT~EEDe~L~~lV~kyG~~nW--~~IAk~mg-~gRt~kQCReRW~n~ 60 (396)
+..+-.||+||.++.+++|+.+|...| +.|.+.|+ .++|..||+-+.+.|
T Consensus 4 kk~R~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKY 56 (64)
T d1irza_ 4 KKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp CCSSCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 345667999999999999999996544 35666554 278889998765554
No 38
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.47 E-value=0.013 Score=44.21 Aligned_cols=50 Identities=14% Similarity=0.263 Sum_probs=43.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCc----hhhhhhcCCCCCHHHHHHHHHHHhhhh
Q 016021 66 KRGMFSQQEEDLIISLHEVLGNR----WAQIASQLPGRTDNEIKNFWNSCLKKK 115 (396)
Q Consensus 66 kkg~WT~EED~~Llelv~~~G~k----W~~IAk~LpGRT~~qcRnRW~~~Lkk~ 115 (396)
..+.|+++|-.+|-.++..+... |..||..+..||+..|..+|..-++.+
T Consensus 7 ~d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VGtRSaeECQ~ky~~~~~~~ 60 (73)
T d1wgxa_ 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPRGK 60 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSSSS
T ss_pred cccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHccCCHHHHHHHHHhCcccc
Confidence 34689999999999999998743 999999999999999999998765544
No 39
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.82 E-value=0.0062 Score=46.03 Aligned_cols=50 Identities=24% Similarity=0.468 Sum_probs=42.9
Q ss_pred CccCCCHHHHHHHHHHHHHhC---CCCceecccccccccccccchhhhhhccCC
Q 016021 13 RKGLWSPEEDEKLYNYITRFG---VGCWSSVPKLAGLQRCGKSCRLRWINYLRP 63 (396)
Q Consensus 13 kKg~WT~EEDe~L~~lV~kyG---~~nW~~IAk~mg~gRt~kQCReRW~n~L~P 63 (396)
.-+.|+++|=++|-.++.-.. ++-|..||..+| .|++..|...|...+..
T Consensus 7 ~d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VG-tRSaeECQ~ky~~~~~~ 59 (73)
T d1wgxa_ 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVG-SRSPEECQRKYMENPRG 59 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTT-TSCHHHHHHHHHHSSSS
T ss_pred cccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHc-cCCHHHHHHHHHhCccc
Confidence 456899999999999998664 456999999999 99999999999876644
No 40
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=90.62 E-value=0.17 Score=41.88 Aligned_cols=67 Identities=13% Similarity=0.248 Sum_probs=48.7
Q ss_pred ccchhhhhhcc--CCCCCCCCCCHHHHHHHHHHHHHhC-Cc---hhhhhhc------------CCCCCHHHHHHHHHHHh
Q 016021 51 KSCRLRWINYL--RPDLKRGMFSQQEEDLIISLHEVLG-NR---WAQIASQ------------LPGRTDNEIKNFWNSCL 112 (396)
Q Consensus 51 kQCReRW~n~L--~P~lkkg~WT~EED~~Llelv~~~G-~k---W~~IAk~------------LpGRT~~qcRnRW~~~L 112 (396)
.+|+.-|...- -++.++..+|+|||.-|+-++.+|| .+ |..|-.. +..||+..|..|...++
T Consensus 31 ~~y~~P~~eL~i~y~~nk~k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~~Ir~~p~FrFDwf~kSRt~~el~rR~~tLi 110 (128)
T d1ofcx2 31 SRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLI 110 (128)
T ss_dssp HTCSSHHHHCCCCCTTCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHH
T ss_pred HHhcChHHHhhhhccccCCCccCHHHHHHHHHHHHHhcCCCccHHHHHHHHHHhCcchhhhhHhccCCHHHHHHHHHHHH
Confidence 34555554421 1344555799999999999999999 44 9888533 24699999999999888
Q ss_pred hhhhh
Q 016021 113 KKKLM 117 (396)
Q Consensus 113 kk~lk 117 (396)
+-..+
T Consensus 111 ~~i~k 115 (128)
T d1ofcx2 111 TLIER 115 (128)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 41
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=89.95 E-value=0.44 Score=33.62 Aligned_cols=44 Identities=18% Similarity=0.348 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHHHHHHhC-CchhhhhhcCCCCCHHHHHHHHHHHh
Q 016021 69 MFSQQEEDLIISLHEVLG-NRWAQIASQLPGRTDNEIKNFWNSCL 112 (396)
Q Consensus 69 ~WT~EED~~Llelv~~~G-~kW~~IAk~LpGRT~~qcRnRW~~~L 112 (396)
.|+.-|=..++++..+|| .+-..||..|.|+|...|+.......
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d~~~Ia~e~~~Kt~eEV~~Y~~vFw 45 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFW 45 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHTTSSTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 499999999999999999 47999999999999999986554443
No 42
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.66 E-value=0.12 Score=35.73 Aligned_cols=44 Identities=16% Similarity=0.189 Sum_probs=35.7
Q ss_pred cCCCHHHHHHHHHHHHHhCCCCceecccccc--cccccccchhhhhh
Q 016021 15 GLWSPEEDEKLYNYITRFGVGCWSSVPKLAG--LQRCGKSCRLRWIN 59 (396)
Q Consensus 15 g~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg--~gRt~kQCReRW~n 59 (396)
..||+||-.-|...|+++|. .|+.|-=..+ .||+.-....+|.+
T Consensus 2 knft~eEv~YL~~GVK~~G~-~WNsILWs~PF~~GR~~vdLA~Ky~~ 47 (49)
T d1x58a1 2 KDFTKEEVNYLFHGVKTMGN-HWNSILWSFPFQKGRRAVDLAHKYHR 47 (49)
T ss_dssp SSCCHHHHHHHHHHHHHHCS-CHHHHHHHSCCCTTCCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcc-hhhhhhhccCCCCCchhhHHHHHHHh
Confidence 46999999999999999995 5999954333 47988888887765
No 43
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=62.11 E-value=2.3 Score=29.73 Aligned_cols=39 Identities=8% Similarity=0.160 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceecccccccccccccchh
Q 016021 16 LWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRL 55 (396)
Q Consensus 16 ~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCRe 55 (396)
.|+..|=..++.+..+||..+-..||..|. +++...++.
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d~~~Ia~e~~-~Kt~eEV~~ 39 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDDIDNIAKDVE-GKTPEEVIE 39 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHTTSST-TCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHhc-CCCHHHHHH
Confidence 499999999999999999889999999997 788877653
No 44
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=60.57 E-value=2.7 Score=34.36 Aligned_cols=32 Identities=13% Similarity=0.212 Sum_probs=26.8
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCCC---ceeccc
Q 016021 11 KLRKGLWSPEEDEKLYNYITRFGVGC---WSSVPK 42 (396)
Q Consensus 11 kikKg~WT~EEDe~L~~lV~kyG~~n---W~~IAk 42 (396)
..++..+|.|||.-|+-++.+||-++ |..|-.
T Consensus 46 ~nk~k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~ 80 (128)
T d1ofcx2 46 NNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRA 80 (128)
T ss_dssp TCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred ccCCCccCHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 44555699999999999999999888 888754
No 45
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=55.05 E-value=8.4 Score=26.54 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhCCchhhhhhcCCCCCHHHHHHHHHHHhhhh
Q 016021 73 QEEDLIISLHEVLGNRWAQIASQLPGRTDNEIKNFWNSCLKKK 115 (396)
Q Consensus 73 EED~~Llelv~~~G~kW~~IAk~LpGRT~~qcRnRW~~~Lkk~ 115 (396)
+.++.++.+....|-...+||+.+ |-+...|+.+....+++-
T Consensus 24 ~~~r~v~~l~~~~~~s~~eIA~~l-gis~~tv~~~~~ra~~~L 65 (71)
T d1rp3a2 24 EREKLVIQLIFYEELPAKEVAKIL-ETSVSRVSQLKAKALERL 65 (71)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHT-TSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhCCHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 456677777777788999999999 999999999988776653
No 46
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=49.77 E-value=8.9 Score=26.59 Aligned_cols=45 Identities=13% Similarity=0.123 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhC-CchhhhhhcCCCCCHHHHHHHHHHHhhhhhhh
Q 016021 73 QEEDLIISLHEVLG-NRWAQIASQLPGRTDNEIKNFWNSCLKKKLMK 118 (396)
Q Consensus 73 EED~~Llelv~~~G-~kW~~IAk~LpGRT~~qcRnRW~~~Lkk~lkk 118 (396)
+=|.+|+++..+-+ -.+.+||+.+ |-+...|+.|...+.+..+.+
T Consensus 5 ~~D~~IL~~L~~~~r~s~~eiA~~l-~ls~~~v~~Ri~rL~~~GiI~ 50 (63)
T d2cg4a1 5 NLDRGILEALMGNARTAYAELAKQF-GVSPETIHVRVEKMKQAGIIT 50 (63)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHH-TSCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeE
Confidence 45788888888877 4699999999 889999999999888876543
No 47
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=46.99 E-value=2 Score=29.87 Aligned_cols=45 Identities=16% Similarity=0.184 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCCCC
Q 016021 20 EEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLK 66 (396)
Q Consensus 20 EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~lk 66 (396)
+=|.+|+.+.++.+...+.+||+.++ -+...|..|.++..+.++-
T Consensus 3 ~~D~~Il~~L~~n~r~s~~eiA~~l~--ls~~~v~~Ri~~L~~~giI 47 (60)
T d2cyya1 3 EIDKKIIKILQNDGKAPLREISKITG--LAESTIHERIRKLRESGVI 47 (60)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHC--SCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHC--cCHHHHHHHHHHHHHCCCe
Confidence 45889999999998889999999998 7888899988776555443
No 48
>d1kkxa_ a.4.3.1 (A:) Transcription regulator Adr6 (Swi1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.94 E-value=6.6 Score=30.15 Aligned_cols=40 Identities=15% Similarity=0.282 Sum_probs=31.0
Q ss_pred HHHHHHHhCC--------chhhhhhcCCCCCHHHHHHHHHHHhhhhhh
Q 016021 78 IISLHEVLGN--------RWAQIASQLPGRTDNEIKNFWNSCLKKKLM 117 (396)
Q Consensus 78 Llelv~~~G~--------kW~~IAk~LpGRT~~qcRnRW~~~Lkk~lk 117 (396)
|..+|.++|+ .|..||+.|..-...++|..|..+|.+--+
T Consensus 39 Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~lr~~Y~~~L~~yE~ 86 (102)
T d1kkxa_ 39 LYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFRILLPYER 86 (102)
T ss_dssp HHHHHTTTSCHHHHTTSHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcChHHhcccCcHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence 5556666663 499999999767888999999999887643
No 49
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=44.33 E-value=23 Score=24.01 Aligned_cols=45 Identities=16% Similarity=0.201 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhCC-chhhhhhcCCCCCHHHHHHHHHHHhhhhhhh
Q 016021 73 QEEDLIISLHEVLGN-RWAQIASQLPGRTDNEIKNFWNSCLKKKLMK 118 (396)
Q Consensus 73 EED~~Llelv~~~G~-kW~~IAk~LpGRT~~qcRnRW~~~Lkk~lkk 118 (396)
+-|.+|+.+..+-+. .+.+||+.+ |-+...|..|.+.+.+..+.+
T Consensus 3 ~~D~~Il~~L~~n~r~s~~eiA~~l-~ls~~~v~~Ri~~L~~~giI~ 48 (60)
T d2cyya1 3 EIDKKIIKILQNDGKAPLREISKIT-GLAESTIHERIRKLRESGVIK 48 (60)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHH-CSCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeE
Confidence 457888888888764 699999999 889999999999888887654
No 50
>d1c20a_ a.4.3.1 (A:) DNA-binding domain from the dead ringer protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=44.15 E-value=13 Score=29.44 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCC--------chhhhhhcCC--CC--C-HHHHHHHHHHHhhhh
Q 016021 76 DLIISLHEVLGN--------RWAQIASQLP--GR--T-DNEIKNFWNSCLKKK 115 (396)
Q Consensus 76 ~~Llelv~~~G~--------kW~~IAk~Lp--GR--T-~~qcRnRW~~~Lkk~ 115 (396)
-.|..+|.+.|+ .|.+|++.|. .. + +.++|..|..+|-+-
T Consensus 55 ~~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~~~~~~L~~~Y~k~L~~f 107 (128)
T d1c20a_ 55 YELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPY 107 (128)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhcCHHHhcccccHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 357778888883 5999999983 22 2 557899999988764
No 51
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=42.21 E-value=10 Score=26.38 Aligned_cols=45 Identities=9% Similarity=-0.011 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhCC-chhhhhhcCCCCCHHHHHHHHHHHhhhhhhh
Q 016021 73 QEEDLIISLHEVLGN-RWAQIASQLPGRTDNEIKNFWNSCLKKKLMK 118 (396)
Q Consensus 73 EED~~Llelv~~~G~-kW~~IAk~LpGRT~~qcRnRW~~~Lkk~lkk 118 (396)
+=|.+|+.+..+-|. ...+||+.+ |-+...|..|.+.+.+..+.+
T Consensus 5 ~~D~~IL~~L~~n~r~s~~~iA~~l-gis~~tv~~Ri~~L~~~giI~ 50 (63)
T d2cfxa1 5 QIDLNIIEELKKDSRLSMRELGRKI-KLSPPSVTERVRQLESFGIIK 50 (63)
T ss_dssp HHHHHHHHHHHHCSCCCHHHHHHHH-TCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCee
Confidence 457888888888774 599999999 999999999999888776554
No 52
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=41.56 E-value=2.2 Score=29.94 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCC
Q 016021 20 EEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPD 64 (396)
Q Consensus 20 EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~ 64 (396)
+=|.+|+.++++.+...+.+||+.++ -+...|+.|..+..+.+
T Consensus 5 ~~D~~IL~~L~~~~r~s~~eiA~~l~--ls~~~v~~Ri~rL~~~G 47 (63)
T d2cg4a1 5 NLDRGILEALMGNARTAYAELAKQFG--VSPETIHVRVEKMKQAG 47 (63)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHT--SCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHC--cCHHHHHHHHHHHHHCC
Confidence 44889999999999889999999997 78889999887765443
No 53
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=40.56 E-value=2.3 Score=30.03 Aligned_cols=44 Identities=7% Similarity=-0.099 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCCC
Q 016021 20 EEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 65 (396)
Q Consensus 20 EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~l 65 (396)
+=|.+|+.+.++.+.....+||+.+| -+...|..|..+..+.++
T Consensus 5 ~~D~~IL~~L~~n~r~s~~~iA~~lg--is~~tv~~Ri~~L~~~gi 48 (63)
T d2cfxa1 5 QIDLNIIEELKKDSRLSMRELGRKIK--LSPPSVTERVRQLESFGI 48 (63)
T ss_dssp HHHHHHHHHHHHCSCCCHHHHHHHHT--CCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHC--cCHHHHHHHHHHHHHCCC
Confidence 45889999999999888999999997 888999999887655544
No 54
>d1ryua_ a.4.3.1 (A:) SWI-SNF complex protein p270, SMARCF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.04 E-value=21 Score=27.86 Aligned_cols=39 Identities=18% Similarity=0.419 Sum_probs=27.4
Q ss_pred HHHHHHHHhCC--------chhhhhhcC--CCCCH--HHHHHHHHHHhhhh
Q 016021 77 LIISLHEVLGN--------RWAQIASQL--PGRTD--NEIKNFWNSCLKKK 115 (396)
Q Consensus 77 ~Llelv~~~G~--------kW~~IAk~L--pGRT~--~qcRnRW~~~Lkk~ 115 (396)
.|..+|.+.|+ +|..|++.| +.=+. .++|+.|..+|.+-
T Consensus 54 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~l~~~~~~~~~~~Lk~~Y~r~L~~y 104 (120)
T d1ryua_ 54 RLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAF 104 (120)
T ss_dssp HHHHHHHHHTCTTGGGTSSHHHHHHHHTTSCCSSHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHhcCHHhhcccchHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 46677777773 599999988 32232 36888888888664
No 55
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=36.06 E-value=26 Score=23.92 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhCCchhhhhhcCCCCCHHHHHHHHHHHhhh
Q 016021 73 QEEDLIISLHEVLGNRWAQIASQLPGRTDNEIKNFWNSCLKK 114 (396)
Q Consensus 73 EED~~Llelv~~~G~kW~~IAk~LpGRT~~qcRnRW~~~Lkk 114 (396)
++++.++.+....|-.-.+||+.+ |-+...|+.|....+++
T Consensus 21 ~~~r~v~~l~~~~~~s~~eIA~~l-gis~~tv~~~l~ra~~~ 61 (68)
T d1or7a1 21 EDLRMAITLRELDGLSYEEIAAIM-DCPVGTVRSRIFRAREA 61 (68)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 556667777777788899999999 99999999998876654
No 56
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=35.90 E-value=33 Score=23.31 Aligned_cols=46 Identities=15% Similarity=0.348 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhCC-chhhhhhcCCCCCHHHHHHHHHHHhhhhhhhC
Q 016021 73 QEEDLIISLHEVLGN-RWAQIASQLPGRTDNEIKNFWNSCLKKKLMKQ 119 (396)
Q Consensus 73 EED~~Llelv~~~G~-kW~~IAk~LpGRT~~qcRnRW~~~Lkk~lkk~ 119 (396)
+-|.+|+.+..+-|. ...+||+.+ |-+...|..|...+.+..+.++
T Consensus 3 ~~D~kIl~~L~~n~r~s~~~lA~~~-gls~~~v~~Ri~~L~~~giI~~ 49 (60)
T d1i1ga1 3 ERDKIILEILEKDARTPFTEIAKKL-GISETAVRKRVKALEEKGIIEG 49 (60)
T ss_dssp SHHHHHHHHHHHCTTCCHHHHHHHH-TSCHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeEe
Confidence 457889998888774 699999999 8899999999998888876543
No 57
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=32.93 E-value=4.5 Score=28.08 Aligned_cols=45 Identities=13% Similarity=0.146 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCCCC
Q 016021 20 EEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLK 66 (396)
Q Consensus 20 EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~lk 66 (396)
+-|.+|+.+.++.+.....+||+.+| -+...|..|..+..+.++-
T Consensus 3 ~~D~kIl~~L~~n~r~s~~~lA~~~g--ls~~~v~~Ri~~L~~~giI 47 (60)
T d1i1ga1 3 ERDKIILEILEKDARTPFTEIAKKLG--ISETAVRKRVKALEEKGII 47 (60)
T ss_dssp SHHHHHHHHHHHCTTCCHHHHHHHHT--SCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHC--cCHHHHHHHHHHHHHCCCe
Confidence 35889999999998888999999998 7888899988776555443
No 58
>d1ryua_ a.4.3.1 (A:) SWI-SNF complex protein p270, SMARCF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.96 E-value=7.6 Score=30.59 Aligned_cols=40 Identities=18% Similarity=0.350 Sum_probs=25.6
Q ss_pred HHHHHHHHhCC-------CCceeccccccccccc---ccchhhhhhccCC
Q 016021 24 KLYNYITRFGV-------GCWSSVPKLAGLQRCG---KSCRLRWINYLRP 63 (396)
Q Consensus 24 ~L~~lV~kyG~-------~nW~~IAk~mg~gRt~---kQCReRW~n~L~P 63 (396)
+|..+|.+.|. +.|..||+.++...+. .+.+..|.++|.|
T Consensus 54 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~l~~~~~~~~~~~Lk~~Y~r~L~~ 103 (120)
T d1ryua_ 54 RLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYA 103 (120)
T ss_dssp HHHHHHHHHTCTTGGGTSSHHHHHHHHTTSCCSSHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhcCHHhhcccchHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 56677777762 2499999988743322 2456677777765
No 59
>d1ig6a_ a.4.3.1 (A:) MRF-2 DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.21 E-value=11 Score=28.84 Aligned_cols=39 Identities=13% Similarity=0.263 Sum_probs=27.9
Q ss_pred HHHHHHHHHhC--------CchhhhhhcC--CCC---CHHHHHHHHHHHhhh
Q 016021 76 DLIISLHEVLG--------NRWAQIASQL--PGR---TDNEIKNFWNSCLKK 114 (396)
Q Consensus 76 ~~Llelv~~~G--------~kW~~IAk~L--pGR---T~~qcRnRW~~~Lkk 114 (396)
-.|..+|.+.| +.|..||+.| |.. ....+|..|..+|-+
T Consensus 36 ~~Ly~~V~~~GG~~~V~~~~~W~~ia~~lg~~~~~~~~~~~Lk~~Y~~~L~~ 87 (107)
T d1ig6a_ 36 WTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILP 87 (107)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHHHHHTTT
T ss_pred HHHHHHHHHhCChhhccccccHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence 35777788888 3599999997 222 145888888888754
No 60
>d1ig6a_ a.4.3.1 (A:) MRF-2 DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.12 E-value=6.5 Score=30.35 Aligned_cols=41 Identities=12% Similarity=0.255 Sum_probs=28.0
Q ss_pred HHHHHHHHHhC-------CCCceecccccccccc----cccchhhhhhccCC
Q 016021 23 EKLYNYITRFG-------VGCWSSVPKLAGLQRC----GKSCRLRWINYLRP 63 (396)
Q Consensus 23 e~L~~lV~kyG-------~~nW~~IAk~mg~gRt----~kQCReRW~n~L~P 63 (396)
-.|..+|.+.| .+.|..||+.|++..+ +...+..|.++|.+
T Consensus 36 ~~Ly~~V~~~GG~~~V~~~~~W~~ia~~lg~~~~~~~~~~~Lk~~Y~~~L~~ 87 (107)
T d1ig6a_ 36 WTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILP 87 (107)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHHHHHTTT
T ss_pred HHHHHHHHHhCChhhccccccHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence 35777888776 2349999999984222 34567778887764
No 61
>d2bgxa1 a.20.1.1 (A:180-260) Probable N-acetylmuramoyl-L-alanine amidase YbjR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.80 E-value=28 Score=25.75 Aligned_cols=67 Identities=19% Similarity=0.305 Sum_probs=48.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCCceecccccccccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 016021 16 LWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGN 87 (396)
Q Consensus 16 ~WT~EEDe~L~~lV~kyG~~nW~~IAk~mg~gRt~kQCReRW~n~L~P~lkkg~WT~EED~~Llelv~~~G~ 87 (396)
..++-|...+.....++|-. |..... .+..+..-.-++.+..|....|....|--.+|..|+++||.
T Consensus 15 ~~~~~~~~~~~~~L~k~GY~----i~~~~~-~~~~k~vi~AFQrhFRp~~i~G~~D~Et~~Il~~L~~KY~~ 81 (81)
T d2bgxa1 15 PHTPVDTASLLELLARYGYD----VKPDMT-PREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQ 81 (81)
T ss_dssp TTCBCCHHHHHHHHHHHTCC----CCTTCC-HHHHHHHHHHHHHHHCTTCCSSCCBHHHHHHHHHHHHHHCC
T ss_pred CCCchhHHHHHHHHHHcCCC----CCCCCC-cHHHHHHHHHHHHHccccccCCcCCHHHHHHHHHHHHHHcC
Confidence 45666777888889999954 321111 23334444567777889999999999999999999999983
No 62
>d1c20a_ a.4.3.1 (A:) DNA-binding domain from the dead ringer protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=25.53 E-value=5.3 Score=31.83 Aligned_cols=40 Identities=28% Similarity=0.487 Sum_probs=26.3
Q ss_pred HHHHHHHHhCC-------CCceecccccccccc----cccchhhhhhccCC
Q 016021 24 KLYNYITRFGV-------GCWSSVPKLAGLQRC----GKSCRLRWINYLRP 63 (396)
Q Consensus 24 ~L~~lV~kyG~-------~nW~~IAk~mg~gRt----~kQCReRW~n~L~P 63 (396)
+|..+|.+.|. +.|..||+.|++..+ +.+.+..|.++|.|
T Consensus 56 ~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~~~~~~L~~~Y~k~L~~ 106 (128)
T d1c20a_ 56 ELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYP 106 (128)
T ss_dssp HHHHHHHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHhcCHHHhcccccHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHH
Confidence 57777887772 349999999984322 22446667666654
Done!