BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016027
(396 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 270/392 (68%), Positives = 329/392 (83%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L KA+EF SAWCLLLD+IGG+E D VS DTF ILIRRY RAGM EAAI TFE+A+
Sbjct: 153 MVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYTRAGMSEAAIRTFEYAS 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+LD++ N ++G SLFEILLDSLCK+G V+ A++YF ++ E D W P+VR+YNILLNGWF
Sbjct: 213 SLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNILLNGWF 272
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS+ +K AER WLEM+K+NV P+VVTYGTLVEGY R+RRV+RAI LV EM++EGI+ NAI
Sbjct: 273 RSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAI 332
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VYN +ID L EAGRF+EV GMME F +CE GPT+ TY SLVKGYCKAGDL GASKILKMM
Sbjct: 333 VYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMM 392
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
ISR P+PTTYNYFFR+FSK K+E+ MNLY KMIESGYTPDRLTYH+LLK+LC+E++L
Sbjct: 393 ISREVFPTPTTYNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERL 452
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
DLA+Q+SKEM+ RGCD+DL TSTM HLLC+M +F+EA AEFEDM+RRG+VP YLTF RL
Sbjct: 453 DLAVQISKEMRARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVPQYLTFHRL 512
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
NDEF+K+G+T LA++LC +MSSV S L ++
Sbjct: 513 NDEFRKQGLTELARRLCKLMSSVSHSKNLPNT 544
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/396 (66%), Positives = 330/396 (83%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI VLAK++ FDSAW L+LD+I G E P+ VS +TF +LIRRYARAGM +AI TFEFA
Sbjct: 143 MIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLSAIRTFEFAF 202
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+LD +++ DS SLF+ILLDSLCK+G V+ ASEYF +++ LD SW P++RVYN+LLNGWF
Sbjct: 203 SLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWF 262
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS+ +K AE+ W M++ENV P VVTYGTLVEGYCR+RR ++AI LV EMR +GIEPN I
Sbjct: 263 RSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVI 322
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VYN +ID L EAGRF+E GMMER LV E GPT+ TY SLVKG+CKAGDL GASK+LKMM
Sbjct: 323 VYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMM 382
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
ISRGF P+ TTYNYFFRYFS+ GK E+ MNLY KMIESG+TPDRLTYH+L+K++C+E++L
Sbjct: 383 ISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERL 442
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
DLA+QVSKEM+ RGCD+DL TSTML+HLLC+M++ +EA AEFEDMIRRG+VP YLTF+R+
Sbjct: 443 DLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERM 502
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
N+ +KRG+T +A+KLC++M+SVP S +L ++ D
Sbjct: 503 NNALRKRGLTEMARKLCDMMASVPHSSKLPNTYSGD 538
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 44/257 (17%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV---TYTSLVKGYCK 226
M++ G E + ++N++ID L ++ F+ ++ + P +V T+ L++ Y +
Sbjct: 128 MKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYAR 187
Query: 227 AG-------------------DLEGASKILKMMI------------------SRG----F 245
AG D + + K+++ RG +
Sbjct: 188 AGMTLSAIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSW 247
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+PS YN + + K++ A L+R M P +TY L++ C+ + + AI+
Sbjct: 248 VPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIE 307
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ EM+ +G + ++ +I L +F EA E + P T+ L F
Sbjct: 308 LVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFC 367
Query: 366 KRGMTALAQKLCNVMSS 382
K G A K+ +M S
Sbjct: 368 KAGDLVGASKVLKMMIS 384
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 265/392 (67%), Positives = 321/392 (81%), Gaps = 7/392 (1%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K KEFDSAWCL+LD+ G VS DTF ILIRRY RAGM ++AI TFE+A
Sbjct: 129 VINALGKMKEFDSAWCLVLDRTG------LVSSDTFAILIRRYTRAGMPQSAIRTFEYAI 182
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+LD + +++ A L EILLDSLCK+G V+ A EYF RK+LD W P VR+YNI+LNGWF
Sbjct: 183 SLDFICDYNCDA-LLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWF 241
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS+ +K AER WLEM+K NV+P+VVTYGTLVEGYCR+RRV+RAI LV MRKEGIEPNA+
Sbjct: 242 RSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNAL 301
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VYN +ID L E GRF+EVSGMME FL E GPT+ TY SLVKGYCKA D GASK+LKMM
Sbjct: 302 VYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMM 361
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
ISRGF+P+PTTYNYFFR+FSKFG +E+ MNLY KMIESGYTPDRLT+H+LLK+LC+E++L
Sbjct: 362 ISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERL 421
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
DLA+Q+SKEM+ RGCD+DL TSTMLIHL CRM++F+EA EFEDMI++G+VP YLTF+RL
Sbjct: 422 DLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRL 481
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
NDE +KRGM A+KL ++MSSVP S L ++
Sbjct: 482 NDELRKRGMVERARKLSDMMSSVPHSTNLPNT 513
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 256/392 (65%), Positives = 320/392 (81%), Gaps = 1/392 (0%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I VLAK++EFDSAW L+ ++ G E VS + FVILIRRYARAGMV+ AI T+EFA
Sbjct: 160 LINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTYEFAC 219
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NL+ + S LFEILLDSLCK+G V+ ASEYF++++E+ S+ P++R YNIL+NGWF
Sbjct: 220 NLETISGTGS-EGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWF 278
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS+ +K A+R W EM+K ++P VVTYGTL+EGYCR+R V+ AI LV EMR+EGIEPNAI
Sbjct: 279 RSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAI 338
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VYN ++D L EAGRF+E GMMERF+V E GPT+ TY SLVKGYCKAGDL GASKILKMM
Sbjct: 339 VYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMM 398
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I RGF P+PTTYNYFFR+FSK+GK+E++M+LY KMIESGY PD+LTYH+LLK+LC+E++L
Sbjct: 399 IGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERL 458
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+LA+QV EMK RG D+DL TSTML+HLLC+M+KF+EA AEFE MI RG+VP YLTF RL
Sbjct: 459 NLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRL 518
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+DEF KRG+T +A KL +MSSVP S +L D+
Sbjct: 519 HDEFMKRGLTKMASKLQEMMSSVPHSEKLPDT 550
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 43/253 (16%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEE--------VSGMMERFLV------------CEP 210
+K G P+A ++N +I+ L ++ F+ + G E FLV
Sbjct: 146 KKSGFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARA 205
Query: 211 G---PTMVTY------------------TSLVKGYCKAGDLEGASKIL--KMMISRGFLP 247
G P + TY L+ CK G + AS+ K + F P
Sbjct: 206 GMVQPAIRTYEFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEP 265
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
S YN + + K++ A L+ +M ++ +P +TY L++ C+ +++AI++
Sbjct: 266 SIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELV 325
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EM+ G + + ++ L +F EA E + P T+ L + K
Sbjct: 326 DEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKA 385
Query: 368 GMTALAQKLCNVM 380
G + A K+ +M
Sbjct: 386 GDLSGASKILKMM 398
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/394 (64%), Positives = 317/394 (80%), Gaps = 2/394 (0%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV--PDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I LAK KEFD AW L+LD+I + VS TF I+IRRYARAGM +AAI TFEF
Sbjct: 144 VINALAKMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFEF 203
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A + + + S SLFEIL+DSLCK+G + ASEY +RKE D W P++RVYNI+LNG
Sbjct: 204 AKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNG 263
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
WFR++ +K AER W EM+ ENV P+VVTYGTLVEGYCR+RRV++A+ +V EM KEGI+PN
Sbjct: 264 WFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPN 323
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
AIVYN +ID L EAGRF+E GMMERF V + GPT+ TY SLVKG+CKAGD+EGASKILK
Sbjct: 324 AIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILK 383
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MISRGFLP PTTYNYFFRYFS+ GKV++ MNLY KMIESG+ PDRLTYH++LK+LC+E+
Sbjct: 384 KMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEE 443
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
KL+LA+QVS EM+ +G D+DL TSTML HLLC+M+K +EA AEFEDMIRRG++P YLTF+
Sbjct: 444 KLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQ 503
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+LN E KK+GM +A+KLC++MSSVP S +L ++
Sbjct: 504 KLNVELKKQGMNEMARKLCHLMSSVPYSDKLPNT 537
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/397 (63%), Positives = 309/397 (77%), Gaps = 6/397 (1%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPD-----FVSKDTFVILIRRYARAGMVEAAIWT 55
++ LAKA+EFD+AW L+L + VS TF I+IRRYARAGM + AI T
Sbjct: 164 VVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVGTFAIMIRRYARAGMSKLAIRT 223
Query: 56 FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
+EFA N + + S SL EIL+DSLCK+G V+ ASEYF +KELD SW P++RVYNI+
Sbjct: 224 YEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEYFLWKKELDLSWVPSIRVYNIM 283
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
LNGWFR + +K ER W EM KEN+ P VVTYGTLVEGYCR+RRV++A+ +V +M KEGI
Sbjct: 284 LNGWFRLRKLKQGERLWAEM-KENMRPTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGI 342
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
PNAIVYN +ID L EAGRF+E GM+ERF V E GPT TY SLVKG+CKAGDL GASK
Sbjct: 343 APNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKAGDLVGASK 402
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
ILKMMISRGFLPS TTYNYFFRYFS+ K+E+ MNLY K+I+SGYTPDRLTYH+L+K+LC
Sbjct: 403 ILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTYHLLVKMLC 462
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+E+KLDLA+QVSKEM+ G D+DL TSTML+HLLC++ + +EA EFEDMIRRG+VP YL
Sbjct: 463 EEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYL 522
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
TF+R+ + KK+GMT +AQKLC +MSSVP S L ++
Sbjct: 523 TFQRMKADLKKQGMTEMAQKLCKLMSSVPYSPNLPNT 559
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/393 (55%), Positives = 300/393 (76%), Gaps = 1/393 (0%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+EF+ AW L+ D++ E + VS DTF++LIRRYARAGMV+ AI FEFA
Sbjct: 141 VINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFAR 200
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGW 119
+ + V S L E+LLD+LCK+G V+ AS Y +R+ + D +W P+VR++NILLNGW
Sbjct: 201 SYEPVCKSASELKLLEVLLDALCKEGYVREASVYLERRRGMMDSNWVPSVRIFNILLNGW 260
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
FRS+ +K AE+ W EM+ NV P VVTYGTL+EGYCR+RRV+ A+ +++EM+ +E
Sbjct: 261 FRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEIAMEILEEMKMAEMELTF 320
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+V+N +IDGL EAGR E GMMERF VCE GPT+VTY SLVK +CKAGDL GASKILKM
Sbjct: 321 MVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKM 380
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++RG P+ +TYN+FF+YFSK K E+ MNLY K+IE+G++PDRLTYH++LK+LC++ K
Sbjct: 381 MMTRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L LAIQV+KEMK RG D DL T+TML+HLLCR+ +EA EF++ +RRG++P Y+TFK
Sbjct: 441 LSLAIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+++ + +GMT +A++L ++MSS+P S +L ++
Sbjct: 501 IDNGLRSKGMTDMAKRLSSLMSSLPHSKKLPNT 533
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/393 (54%), Positives = 298/393 (75%), Gaps = 1/393 (0%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA+EF+ AW L+ D++ E + VS DTF++LIRRYARAGMV+ AI FEFA
Sbjct: 141 VVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFAR 200
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGW 119
+ + V + L E+LLD+LCK+G V+ AS Y + +D +W P+VR++NILLNGW
Sbjct: 201 SYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGW 260
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
FRS+ +K AE+ W EM+ NV P VVTYGTL+EGYCR+RRV A+ +++EM+ +E N
Sbjct: 261 FRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINF 320
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+V+N +IDGL EAGR E GMMERF VCE GPT+VTY SLVK +CKAGDL GASKILKM
Sbjct: 321 MVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKM 380
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++RG P+ TTYN+FF+YFSK K E+ MNLY K+IE+G++PDRLTYH++LK+LC++ K
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L LA+QV+KEMK RG D DL T+TMLIHLLCR+ +EA EF++ +RRG++P Y+TFK
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+++ + +GM+ +A++L ++MSS+P S +L ++
Sbjct: 501 IDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNT 533
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 178/395 (45%), Positives = 247/395 (62%), Gaps = 9/395 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF--- 58
+ +LA F +AW LLL P F L+RRYAR G AA+ F+F
Sbjct: 77 VSLLASRGLFAAAWRLLLAP-----SPTPPPLAAFAPLVRRYARLGRAPAALRAFQFLRR 131
Query: 59 -ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ + + ASL + +D+LCK+G +AA E F + + + P R YNILL+
Sbjct: 132 HPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLH 191
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
GW R+ + + W EMR V P VVTYGTL+EG C RR D+AI L+ EMR+EGIE
Sbjct: 192 GWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEA 251
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + N ++ L +AGRF++ ++E+F + P + T+ SLV GYCK GDL GAS +L
Sbjct: 252 NLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVL 311
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K+M RG P+ TYNYFF F+K VE MN Y KMI +GY+PD+LTY +L+K+L +
Sbjct: 312 KVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRA 371
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++L+L +Q+ +EM+ G + DL TSTMLIHLLCR ++F+EA AEFEDM +RG+VP Y+T+
Sbjct: 372 NRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITY 431
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
++L E K+ G+ L QKL N+M SVP S +L S
Sbjct: 432 QKLMRELKRLGLVRLIQKLTNLMRSVPHSTKLPGS 466
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/395 (44%), Positives = 246/395 (62%), Gaps = 9/395 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF--- 58
+ +L F +AW LLL P F L+RRYAR G AA+ F+F
Sbjct: 77 VSLLTSRGLFAAAWRLLLAP-----SPTPPPLAAFAPLVRRYARLGRAPAALRAFQFLRR 131
Query: 59 -ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ + + ASL + +D+LCK+G +AA E F + + + P R YNILL+
Sbjct: 132 HPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLH 191
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
GW R+ + + W EMR V P VVTYGTL+EG C RR D+AI L+ EMR+EGIE
Sbjct: 192 GWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEA 251
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + N ++ L +AGRF++ ++E+F + P + T+ SLV GYCK GDL GAS +L
Sbjct: 252 NLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVL 311
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K+M RG P+ TYNYFF F+K VE MN Y KMI +GY+PD+LTY +L+K+L +
Sbjct: 312 KVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRA 371
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++L+L +Q+ +EM+ G + DL TSTMLIHLLCR ++F+EA AEFEDM +RG+VP Y+T+
Sbjct: 372 NRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITY 431
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
++L E K+ G+ L QKL N+M SVP S +L S
Sbjct: 432 QKLMRELKRLGLVHLIQKLTNLMRSVPHSTKLPGS 466
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 252/396 (63%), Gaps = 11/396 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF--- 58
+ +LA + F +AW LL + F L+RRYAR G ++A+ TF F
Sbjct: 71 VSLLASRRLFAAAWRFLLFQPAAASP--PPPLAAFAPLLRRYARIGRTDSAVRTFRFLQR 128
Query: 59 -----ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYN 113
A D+ + ++ + L + +D+LCK+G +AA+ + + D WAP VR+YN
Sbjct: 129 HPGRYAVESDVTPSAEALSPLI-LTIDALCKEGHPRAAALLVAQIRREDDGWAPDVRIYN 187
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
ILLNGW R++ + AE+ W MR E V P VVTYGT ++ +C +RR D A+ L+ +MR+E
Sbjct: 188 ILLNGWSRARRLDKAEKLWAAMRDEGVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREE 247
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIE N + N ++ L AGRF + ++E+F + P + T+ SLV GYC+ GDL GA
Sbjct: 248 GIEANLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGA 307
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
S++LK M+ RG P+ TYNYFF F++ ++ MNLY KM+ +GY PDRLTYH+L+K+
Sbjct: 308 SRVLKAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPDRLTYHLLIKM 367
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LC+ ++L+L +Q+ +EM+ G + DL TSTMLIHLLCR ++F+EA AEFE M RG+VP
Sbjct: 368 LCEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAEFEQMFERGMVPQ 427
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
Y+T++ L E K+ G+ L QKL ++M SVP S +L
Sbjct: 428 YITYRMLMRELKRLGLVKLVQKLADLMRSVPHSTKL 463
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 230/361 (63%), Gaps = 9/361 (2%)
Query: 41 RRYARAGMVEAAIWTFEF---------ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
RRYAR G ++A F F + D ++ S + +D+LCK+G +AA
Sbjct: 107 RRYARLGRTDSAARAFRFLQRHPGCYAVESDDGAPAAEAAVSPLILTVDALCKEGHPRAA 166
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ + + D WAP VRVYNILLNGW R++ + E+ W MR E V P VVTYGT +
Sbjct: 167 ARLVAQVRREDGGWAPDVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTFI 226
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+ YC +RR D+A+ L+ +MR+EGI+ N + N ++ L +AGRF + ++E+F +
Sbjct: 227 DAYCVMRRPDQAMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLYGVS 286
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + T+ SLV GYCK GDL GAS +LK M+ RG P+ TYNYFF FS+ +E MNL
Sbjct: 287 PNISTFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELGMNL 346
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
Y KM+ +GY PD+ TYH+L+K+LC+ ++L+L +Q+ +EM+ G + D TSTMLIHLLCR
Sbjct: 347 YVKMVSNGYAPDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFEPDQATSTMLIHLLCR 406
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
+ F+EA AEFE M RG+VP Y+T++ L E K+ G+ L QKL ++M SVP S +L
Sbjct: 407 RHHFEEAFAEFEQMFERGIVPQYITYRMLMKELKRLGLVKLVQKLADLMRSVPHSTKLPG 466
Query: 392 S 392
S
Sbjct: 467 S 467
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/367 (45%), Positives = 233/367 (63%), Gaps = 8/367 (2%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFAN-NLDMVKNFDSG------ASLFEILLDSLCKQG 86
D F LIRRYAR G AA+ F F + D D G L + + +LCK+G
Sbjct: 105 DAFAPLIRRYARLGRATAALRAFHFLRRHPDRYSVVDGGDCSPAATCLLNMTVGALCKEG 164
Query: 87 RVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ A++ + R E AP R YN+LL+GW ++ ++ E+ W EMR V VV
Sbjct: 165 HPRPAAKLIQRCRHEEGTLPAPDERTYNMLLDGWSSARRLEKVEKLWAEMRLAGVRSTVV 224
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+YGTL++ C ++ D+A L+ EMR++GIE N + N ++ L AGRF++ ++E+F
Sbjct: 225 SYGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAYKLLEKF 284
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P + T+ SLV GYCK GDL GAS +LK MI RG LP+ TYNYFF +F+K V
Sbjct: 285 PLYGVAPNISTFNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYNYFFVFFAKTCNV 344
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E MNLY KM+ +GY PD++TY++L+K+LC+ ++L+L +Q+ KEMK G + DL TSTML
Sbjct: 345 ELGMNLYNKMVNNGYAPDQITYNLLIKMLCEANRLELVVQMIKEMKTSGFESDLATSTML 404
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
IHLLCR ++F+EA EFEDM RRGLVP Y+T++ L E K+ G+ L +KL N+M SVP
Sbjct: 405 IHLLCRSHQFEEACVEFEDMFRRGLVPQYITYRMLMKEIKRLGLVELVEKLTNLMRSVPH 464
Query: 386 SMELLDS 392
S +L S
Sbjct: 465 STKLPGS 471
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 242/396 (61%), Gaps = 9/396 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +LA F ++W LLL + F L+RRYAR G AA+ F F
Sbjct: 83 VSLLASRGLFAASWRLLLFQPPSSPP---PPLAAFAPLVRRYARLGRSSAALRAFHFLRR 139
Query: 62 LDMVKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
D AS L + + +LCK+G + A++ KR + AP R YN+LL
Sbjct: 140 NPDRYTVDGDASPAATSLLNMAVGALCKEGHPRPAAKLV-KRCRREGELAPDERTYNMLL 198
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+GW ++ + + W EM V P VV+YGTL++ CR+++ D+A+ L+ EMRKEGIE
Sbjct: 199 DGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLIKAVCRVQQPDQAVSLLDEMRKEGIE 258
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
N + N ++ L AGRF + ++E+F + P + T+ SLV YCK GDL GAS +
Sbjct: 259 ANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGVAPNISTFNSLVLAYCKYGDLAGASGV 318
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
LK M+ RG LP+ TYNYFF +F+K G VE MNLY KM+ +GY PD+ TY++L+K+LC+
Sbjct: 319 LKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGYAPDQTTYNLLVKMLCE 378
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
++L+L +Q+ KEM+ G + DL TSTMLIHLLCR ++F+EA AEF+DM RRG VP Y+T
Sbjct: 379 ANRLELVVQMIKEMRANGFESDLATSTMLIHLLCRSHRFEEACAEFKDMFRRGHVPQYIT 438
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
++ L E K+ G+ L +KL ++M SVP S +L S
Sbjct: 439 YRMLMKELKRLGLVELEEKLTDLMRSVPHSTKLPGS 474
>gi|125570550|gb|EAZ12065.1| hypothetical protein OsJ_01947 [Oryza sativa Japonica Group]
Length = 348
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/258 (51%), Positives = 181/258 (70%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR V P VVTYGTL+EG C RR D+AI L+ EMR+EGIE N + N ++ L +AGR
Sbjct: 1 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F++ ++E+F + P + T+ SLV GYCK GDL GAS +LK+M RG P+ TYNY
Sbjct: 61 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
FF F+K VE MN Y KMI +GY+PD+LTY +L+K+L + ++L+L +Q+ +EM+ G
Sbjct: 121 FFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ DL TSTMLIHLLCR ++F+EA AEFEDM +RG+VP Y+T+++L E K+ G+ L Q
Sbjct: 181 FEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLIQ 240
Query: 375 KLCNVMSSVPRSMELLDS 392
KL N+M SVP S +L S
Sbjct: 241 KLTNLMRSVPHSTKLPGS 258
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 80/213 (37%), Gaps = 40/213 (18%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S F L+ CK G + AS E + +PT R YN + ++ +V+ F+
Sbjct: 81 STFNSLVMGYCKHGDLAGASSVLKVMTE--RGISPTTRTYNYFFMTFAKNSDVESGMNFY 138
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M +P+ +TY LV+ R R++ +++++EMR G E
Sbjct: 139 SKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFE---------------- 182
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
P + T T L+ C+ E A + M RG +P TY
Sbjct: 183 -------------------PDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITY 223
Query: 253 NYFFRYFSKFGKV---EDAMNLYRKMIESGYTP 282
R + G V + NL R + S P
Sbjct: 224 QKLMRELKRLGLVHLIQKLTNLMRSVPHSTKLP 256
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 194/371 (52%), Gaps = 24/371 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +LAK ++FD+AW L+L D DTF++LIRR +G AI F +
Sbjct: 108 LLDILAKVRQFDAAWHLILQM-------DHKGTDTFLLLIRRLISSGRTRQAIRAF---D 157
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + G F LLD LCK G VK A E F+KRKE + V++Y IL+ GW
Sbjct: 158 DIEGLTGNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKRKE---EFGVDVKIYTILIYGWC 214
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------RVDRAIR----LVKEM 170
+ + AERF +M + + PNVVTY L+ G CR R ++ IR + EM
Sbjct: 215 KIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEM 274
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
RK GIEP+ ++ V+ A + E +++ PT+ TYTS++K C G L
Sbjct: 275 RKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRL 334
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY-TPDRLTYHI 289
E +++ M+ G PSPTTYN FF+ + A+ LY+KM E P TY+I
Sbjct: 335 EDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNI 394
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
LL + DK + ++ +MK G DLD+ T +IH LC ++ EA F +MI RG
Sbjct: 395 LLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERG 454
Query: 350 LVPHYLTFKRL 360
+P +TF+ L
Sbjct: 455 FLPQKVTFEML 465
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------F 195
+ +Y L++ ++R+ D A L+ +M +G + + +I L+ +GR F
Sbjct: 101 STTSYNILLDILAKVRQFDAAWHLILQMDHKGTD----TFLLLIRRLISSGRTRQAIRAF 156
Query: 196 EEVSGM------MERF-----LVCEPGPTMVT-----------------YTSLVKGYCKA 227
+++ G+ ++ F ++C+ G V YT L+ G+CK
Sbjct: 157 DDIEGLTGNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKI 216
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYF---------SKFGK-VEDAMNLYRKMIE 277
G E A + LK M+ RG P+ TYN +F K + A ++ +M +
Sbjct: 217 GRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRK 276
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G PD ++ I+L + + K +L++ K+MK G + T T +I LC + ++
Sbjct: 277 RGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLED 336
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
E+M+R G+ P T+ E++ R A A +L M
Sbjct: 337 GENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKM 379
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + +K+ D AP++ YNILL + + + W +M++ V P++ +Y T
Sbjct: 370 AGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTT 429
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
++ G C +R A + EM + G P + + + GL+++
Sbjct: 430 IIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQS 472
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 203/382 (53%), Gaps = 17/382 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I+ L K K+F+ W L+ D K G +S++TF ++ RRYARA V+ A+ +FE
Sbjct: 162 LIEALGKIKQFNVIWNLVSDMKRKG-----ILSRETFALITRRYARARKVKEAVESFEKM 216
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
F G S F LLD+LCK VK A E F K K + P ++ Y ILL GW
Sbjct: 217 EKF----GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKH--GRFKPDIKSYTILLEGW 270
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +N+ + EMR E P+VVT+G L+ +C+ R+ D AIRL EM + I+P+
Sbjct: 271 GQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSP 330
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
V+ T+I+GL R +E E+ + P TY ++V YC + + A +++
Sbjct: 331 HVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDE 390
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTPDRLTYHILLKILCKED 298
M G P+ TY+ + K K ++A +++++M E G P TY I++++ C E+
Sbjct: 391 MRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEE 450
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D+AIQ+ EMK +G + + LI+ LC +K ++A F++M+ G+ P F
Sbjct: 451 RVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFS 510
Query: 359 RLN----DEFKKRGMTALAQKL 376
L D+ +K +A+K+
Sbjct: 511 NLKQALLDDGRKDTALLMAEKI 532
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 47 GMVEAAIWTFEFANNLDMVKNF-DSG----ASLFEILLDSLCKQGRVKAASEYFHKRKEL 101
+V A W+ + A MV SG + ++I+L L K + K A F +R
Sbjct: 370 AVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVF-QRMSR 428
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ PT+ Y+I++ + + V A + W EM+ + V P + + TL+ C +++
Sbjct: 429 EPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLE 488
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
A +EM GI P A +++ + L++ GR + M E+ P
Sbjct: 489 DACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIXKLRKAP 539
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 2/226 (0%)
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
W E +K +Y L+E ++++ + LV +M+++GI + +
Sbjct: 145 WAEKQK-GFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRE-TFALITRRYAR 202
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A + +E E+ + + L+ CK+ +++ A ++ M F P +
Sbjct: 203 ARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKS 262
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y + + + +YR+M + G+ PD +T+ IL+ CK K D AI++ EM+
Sbjct: 263 YTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEME 322
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ LI+ L + EA FE + G P T+
Sbjct: 323 AKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTY 368
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 203/382 (53%), Gaps = 17/382 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I+ L K K+F+ W L+ D K G +S++TF ++ RRYARA V+ A+ +FE
Sbjct: 162 LIEALGKIKQFNVIWNLVSDMKRKG-----ILSRETFALITRRYARARKVKEAVESFEKM 216
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
F G S F LLD+LCK VK A E F K K + P ++ Y ILL GW
Sbjct: 217 EKF----GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKH--GRFKPDIKSYTILLEGW 270
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +N+ + EMR E P+VVT+G L+ +C+ R+ D AIRL EM + I+P+
Sbjct: 271 GQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSP 330
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
V+ T+I+GL R +E E+ + P TY ++V YC + + A +++
Sbjct: 331 HVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDE 390
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTPDRLTYHILLKILCKED 298
M G P+ TY+ + K K ++A +++++M E G P TY I++++ C E+
Sbjct: 391 MRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEE 450
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D+AIQ+ EMK +G + + LI+ LC +K ++A F++M+ G+ P F
Sbjct: 451 RVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFS 510
Query: 359 RLN----DEFKKRGMTALAQKL 376
L D+ +K +A+K+
Sbjct: 511 NLKQALLDDGRKDTALLMAEKI 532
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 127/248 (51%), Gaps = 5/248 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ F+ F IL+++ CK + A FH+ + ++ P+ V+ L+NG K +
Sbjct: 289 EGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEA--KNIKPSPHVFCTLINGLGSEKRL 346
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K+A F+ +++ P TY +V YC ++ A R+V EMRK G+ PN+ Y+ +
Sbjct: 347 KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDII 406
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+ L++ + +E + +R + EPG PT+ TY +++ +C ++ A +I M ++
Sbjct: 407 LHHLIKGRKSKEAYSVFQR-MSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAK 465
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G LP ++ K+EDA +++M++ G P + L + L + + D A
Sbjct: 466 GVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTA 525
Query: 304 IQVSKEMK 311
+ +++++K
Sbjct: 526 LLMAEKIK 533
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 2/226 (0%)
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
W E +K +Y L+E ++++ + LV +M+++GI + +
Sbjct: 145 WAEKQK-GFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRE-TFALITRRYAR 202
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A + +E E+ + + L+ CK+ +++ A ++ M F P +
Sbjct: 203 ARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKS 262
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y + + + +YR+M + G+ PD +T+ IL+ CK K D AI++ EM+
Sbjct: 263 YTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEME 322
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ LI+ L + EA FE + G P T+
Sbjct: 323 AKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTY 368
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 47 GMVEAAIWTFEFANNLDMVKNF-DSG----ASLFEILLDSLCKQGRVKAASEYFHKRKEL 101
+V A W+ + A MV SG + ++I+L L K + K A F +R
Sbjct: 370 AVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVF-QRMSR 428
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ PT+ Y+I++ + + V A + W EM+ + V P + + TL+ C +++
Sbjct: 429 EPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLE 488
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
A +EM GI P A +++ + L++ GR + M E+ P
Sbjct: 489 DACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLRKAP 539
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 196/376 (52%), Gaps = 30/376 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ L +A++FD+AW L+++ G P TF +L RRY AGM A+ F+
Sbjct: 109 VVDALGRARQFDAAWRLVVEAAADGAATPR-----TFAVLARRYVAAGMTRQAVRAFD-- 161
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+++ + A+ F LLD+LCK K A+E F+KRK + P ++Y +L+ GW
Sbjct: 162 -DMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRK---YKYEPNEKMYTVLIYGW 217
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------RVDRAIR----LVKE 169
+ A++F +M + PN+VTY L+ G CR R DR +R L+KE
Sbjct: 218 CKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKE 277
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCK 226
M + GIEPN Y+ ++ A + E M M+ +C PT+ TYTS++K
Sbjct: 278 MHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGIC---PTVATYTSVIKCLAS 334
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG--YTPDR 284
G L+ A +L M S G PSP TYN FF+ + V A+ LY KM G TPD
Sbjct: 335 CGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDI 394
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
TY+ILL + K ++ D +QV +M DL++ T+L+H LC K+ EA F +
Sbjct: 395 HTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFME 454
Query: 345 MIRRGLVPHYLTFKRL 360
MI RG +P +TF+ L
Sbjct: 455 MIERGFLPQKITFETL 470
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV Y ++ + DAE EM E V P+ TY + Y + V+ A++L
Sbjct: 320 PTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQL 379
Query: 167 VKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+M+ G P+ YN ++ ++ + + V + GP + +YT LV G
Sbjct: 380 YNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGL 439
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
C A + MI RGFLP T+ +R
Sbjct: 440 CDNKKWREACQFFMEMIERGFLPQKITFETLYR 472
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + ++K K P + YNILL + + + W +M + V P++ +Y
Sbjct: 373 VNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSY 432
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
LV G C ++ A + EM + G P I + T+ GL++A
Sbjct: 433 TLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLYRGLIQA 477
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 196/376 (52%), Gaps = 30/376 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ L +A++FD+AW L+++ G P TF +L RRY AGM A+ F+
Sbjct: 109 VVDALGRARQFDAAWRLVVEAAADGAATPR-----TFAVLARRYVAAGMTRQAVRAFD-- 161
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+++ + A+ F LLD+LCK K A+E F+KRK + P ++Y +L+ GW
Sbjct: 162 -DMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRK---YKYEPNEKMYTVLIYGW 217
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------RVDRAIR----LVKE 169
+ A++F +M + PN+VTY L+ G CR R DR +R L+KE
Sbjct: 218 CKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKE 277
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCK 226
M + GIEP+ Y+ ++ A + E M M+ +C PT+ TYTS++K
Sbjct: 278 MHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGIC---PTVATYTSVIKCLAS 334
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG--YTPDR 284
G L+ A +L M S G PSP TYN FF+ + V A+ LY KM G TPD
Sbjct: 335 CGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDI 394
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
TY+ILL + K ++ D +QV +M DL++ T+L+H LC K+ EA F +
Sbjct: 395 HTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFME 454
Query: 345 MIRRGLVPHYLTFKRL 360
MI RG +P +TF+ L
Sbjct: 455 MIERGFLPQKITFETL 470
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV Y ++ + DAE EM E V P+ TY + Y + V+ A++L
Sbjct: 320 PTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQL 379
Query: 167 VKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+M+ G P+ YN ++ ++ + + V + GP + +YT LV G
Sbjct: 380 YNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGL 439
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
C A + MI RGFLP T+ +R
Sbjct: 440 CDNKKWREACQFFMEMIERGFLPQKITFETLYR 472
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + ++K K P + YNILL + + + W +M + V P++ +Y
Sbjct: 373 VNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSY 432
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
LV G C ++ A + EM + G P I + T+ GL++A
Sbjct: 433 TLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLYRGLIQA 477
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 196/371 (52%), Gaps = 20/371 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +LAK ++FD AW +++ P + TF ILIRR AG+ A+ F +
Sbjct: 123 IIDILAKVRQFDVAWQFIIEMDQNSLEP---TSTTFRILIRRSVSAGLTRQAVRAF---D 176
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ D+ + F LLD+L K G VK AS+ F++RK + ++Y IL+ GW
Sbjct: 177 DMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKF---KFEANAKMYTILIYGWC 233
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------RVDRAIR----LVKEM 170
+ V AER EM + + NVVTY L+ G CR R +R IR ++ EM
Sbjct: 234 KINRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEM 293
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
R++GIEP+ Y+ VI A + E + PT+ TYTS+VK C G L
Sbjct: 294 RQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRL 353
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHI 289
E A +++ M+ G PS TYN FF+ + ++A+ LYRKM E PD TY+I
Sbjct: 354 EDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNI 413
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ + K +++++ ++ +MK G DLD+ T+LIH LC K+ EA F +MI +G
Sbjct: 414 LVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKG 473
Query: 350 LVPHYLTFKRL 360
+P +TF+ L
Sbjct: 474 YLPQKITFETL 484
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ PTV Y ++ ++DAE +M K+ V+P+ TY + Y + D
Sbjct: 330 DKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSD 389
Query: 162 RAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A+RL ++M++E P+ YN ++ V+ R E V + + GP + +YT L
Sbjct: 390 NALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLL 449
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G C+ + A MI +G+LP T+ +R + ++ L +K+ E
Sbjct: 450 IHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESI 509
Query: 281 T 281
T
Sbjct: 510 T 510
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 51/297 (17%)
Query: 120 FRSKNV-KDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
R +NV K A F+L + + + + +VV+Y +++ ++R+ D A + + EM + +EP
Sbjct: 91 LRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEP 150
Query: 178 NAIVYNTVIDGLVEAG-------RFEEVSGMME--------------------------- 203
+ + +I V AG F+++S +E
Sbjct: 151 TSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQI 210
Query: 204 ---RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
R E M YT L+ G+CK + A ++L M+ RG + TYN
Sbjct: 211 FNQRKFKFEANAKM--YTILIYGWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGIC 268
Query: 261 KFGK----------VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+ + DA + +M + G PD +Y I++ + + K +L + + M
Sbjct: 269 RRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMM 328
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
K +G + T T ++ LC + ++A DM++ G+ P T+ E++ R
Sbjct: 329 KDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGR 385
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 28 PDFVSKDTFVILIRRYARAG-----------MVEAAIWTFEFANNLDMVKNFDSGASL-- 74
PD S + I+I Y+RA M + IW A +VK S L
Sbjct: 300 PDVTS---YSIVIHVYSRAHKPELTLDKLRMMKDKGIWP-TVATYTSVVKCLCSCGRLED 355
Query: 75 FEILLDSLCKQGRVKAASEY------FHKRKELDQ------------SWAPTVRVYNILL 116
E L+ + K G +A+ Y + RK+ D S P + YNIL+
Sbjct: 356 AEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILV 415
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + ++ + W +M+ P++ +Y L+ G C ++ A EM ++G
Sbjct: 416 GMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYL 475
Query: 177 PNAIVYNTVIDGLVEA 192
P I + T+ GL+++
Sbjct: 476 PQKITFETLYRGLIQS 491
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 195/371 (52%), Gaps = 20/371 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +LAK ++FD AW +++ P + TF ILIRR AG+ A+ F +
Sbjct: 123 IIDILAKVRQFDVAWQFIIEMDQNSLEP---TSTTFRILIRRSVSAGLTRQAVRAF---D 176
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ D+ + F LLD+L K G VK AS+ F++RK + ++Y IL+ GW
Sbjct: 177 DMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKF---KFEANAKMYTILIYGWC 233
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------RVDRAIR----LVKEM 170
+ V AER EM + + NVVTY L+ G CR R +R IR ++ EM
Sbjct: 234 KINRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEM 293
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
R+ GIEP+ Y+ VI A + E + PT+ TYTS+VK C G L
Sbjct: 294 RQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRL 353
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHI 289
E A +++ M+ G PS TYN FF+ + ++A+ LYRKM E PD TY+I
Sbjct: 354 EDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNI 413
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ + K +++++ ++ +MK G DLD+ T+LIH LC K+ EA F +MI +G
Sbjct: 414 LVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKG 473
Query: 350 LVPHYLTFKRL 360
+P +TF+ L
Sbjct: 474 YLPQKITFETL 484
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ PTV Y ++ ++DAE +M K+ V+P+ TY + Y + D
Sbjct: 330 DKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSD 389
Query: 162 RAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A+RL ++M++E P+ YN ++ V+ R E V + + GP + +YT L
Sbjct: 390 NALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLL 449
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G C+ + A MI +G+LP T+ +R + ++ L +K+ E
Sbjct: 450 IHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESI 509
Query: 281 T 281
T
Sbjct: 510 T 510
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 51/297 (17%)
Query: 120 FRSKNV-KDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
R +NV K A F+L + + + + +VV+Y +++ ++R+ D A + + EM + +EP
Sbjct: 91 LRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEP 150
Query: 178 NAIVYNTVIDGLVEAG-------RFEEVSGMME--------------------------- 203
+ + +I V AG F+++S +E
Sbjct: 151 TSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQI 210
Query: 204 ---RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
R E M YT L+ G+CK + A ++L M+ RG + TYN
Sbjct: 211 FNQRKFKFEANAKM--YTILIYGWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNGIC 268
Query: 261 KFGK----------VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+ + DA + +M + G PD +Y I++ + + K +L + + M
Sbjct: 269 RXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMM 328
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
K +G + T T ++ LC + ++A DM++ G+ P T+ E++ R
Sbjct: 329 KDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGR 385
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 28 PDFVSKDTFVILIRRYARAG-----------MVEAAIWTFEFANNLDMVKNFDSGASL-- 74
PD S + I+I Y+RA M + IW A +VK S L
Sbjct: 300 PDVTS---YSIVIHVYSRAHKPELTLDKLRMMKDKGIWP-TVATYTSVVKCLCSCGRLED 355
Query: 75 FEILLDSLCKQGRVKAASEY------FHKRKELDQ------------SWAPTVRVYNILL 116
E L+ + K G +A+ Y + RK+ D S P + YNIL+
Sbjct: 356 AEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILV 415
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + ++ + W +M+ P++ +Y L+ G C ++ A EM ++G
Sbjct: 416 GMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYL 475
Query: 177 PNAIVYNTVIDGLVEA 192
P I + T+ GL+++
Sbjct: 476 PQKITFETLYRGLIQS 491
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 203/373 (54%), Gaps = 24/373 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +LAK ++FD W L+++ + P + +TF +LIRR AG+ AI F+
Sbjct: 146 MIDILAKVRQFDVCWQLIVEMDQRNVKP---TSETFFVLIRRLVAAGLTRQAIRAFD--- 199
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + + F LLD+LCK G VK E F+KRK ++P V++Y +L+ GW
Sbjct: 200 DMESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRK---HRFSPNVKMYTVLIYGWC 256
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL------RRVDRAIRLVK----EM 170
+ + AERF E + + VVTY L+ G CR R +R I L + EM
Sbjct: 257 KIGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEM 316
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAG 228
R+ GIEP+ ++ V+ A + E ++ L+ E G P++VTYTS+VK C G
Sbjct: 317 RERGIEPDVTSFSIVLHVYSRAHKPELTLDKLK--LMKEKGICPSVVTYTSVVKCLCSCG 374
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL-TY 287
+E A ++L M+ G + TYN FF+ + E A+ LY+KM E G L +Y
Sbjct: 375 RIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSY 434
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ILL++ ++LD+ ++ +++K G DLD+ TMLIH LC K+ EA F +MI
Sbjct: 435 NILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIE 494
Query: 348 RGLVPHYLTFKRL 360
+GL+P +TF+ L
Sbjct: 495 KGLLPQKVTFETL 507
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 20/281 (7%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
YN++++ + + + +EM + NV P T+ L+ +AIR +M
Sbjct: 142 TYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDM 201
Query: 171 RKEGIEP-NAIVYNTVIDGLVEAGRF----EEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
EP N + ++D L + G E + RF P + YT L+ G+C
Sbjct: 202 ESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRF-----SPNVKMYTVLIYGWC 256
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF---------SKFGK-VEDAMNLYRKM 275
K G ++ A + LK RG + TYN S+F + + A NL+ +M
Sbjct: 257 KIGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEM 316
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
E G PD ++ I+L + + K +L + K MK +G + T T ++ LC +
Sbjct: 317 RERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRI 376
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++A +M+R G+ +T+ E+ R A KL
Sbjct: 377 EDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKL 417
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
++ P+V Y ++ ++DAE EM + V+ VTY + Y + +
Sbjct: 353 EKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAE 412
Query: 162 RAIRLVKEMRKEGIEPNAI-VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A++L K+MR++G+ + YN ++ + R + V+ + E GP + +YT L
Sbjct: 413 SALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTML 472
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G C+ A K MI +G LP T+ ++ + + L +K+ E
Sbjct: 473 IHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLDEESI 532
Query: 281 T 281
T
Sbjct: 533 T 533
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 63 DMVKNFDSGASLFEILLDSLCKQ--GRVKAASEY-FHKRKELDQSWAPTVRVYNILLNGW 119
+MV+N G S + + K+ GR A S +K+ D + + YNILL +
Sbjct: 385 EMVRN---GVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMF 441
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ W +++ + P++ +Y L+ G C + A + EM ++G+ P
Sbjct: 442 MMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQK 501
Query: 180 IVYNTVIDGLVEA 192
+ + T+ GL+++
Sbjct: 502 VTFETLYKGLIQS 514
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +L+K ++FD +W L++ + P+ TF+ILIRR AG AI F+
Sbjct: 109 IIDILSKVRQFDVSWQLIIQMDQNNLQPN---SHTFLILIRRLISAGFTRQAIRAFD--- 162
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + F LLD+LCK G +K A E F+KRK + P VR+Y +L+ GW
Sbjct: 163 DMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKF---RFLPNVRIYTVLIYGWC 219
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL----------RRVDRAIRLVKEM 170
+ + AERF EM + + NVVTY L++G CR R + +A ++ EM
Sbjct: 220 KIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEM 279
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
R++GIEP+ ++ ++ A + + + +ME +C PT+ TYTS++K C
Sbjct: 280 RQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGIC---PTVATYTSVLKCLCSC 336
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRLT 286
G ++ A ++L+ M+ G P+ TYN FF+ + E A+ LYRK+ + P T
Sbjct: 337 GRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHT 396
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ILL + K ++ ++ ++ +++ G DLD+ T+L+H LC K+ +A F +MI
Sbjct: 397 YNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMI 456
Query: 347 RRGLVPHYLTFKRL 360
+GL+P TF+ L
Sbjct: 457 EKGLLPQKATFEML 470
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 21/303 (6%)
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
K A +FH L S T YN++++ + + + + ++M + N+ PN T+
Sbjct: 84 KIALSFFHYSLSLPSSSVNTT-TYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFL 142
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEP-NAIVYNTVIDGLVEAGRFEEVSGMME---- 203
L+ +AIR +M E N + ++D L + G + +
Sbjct: 143 ILIRRLISAGFTRQAIRAFDDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKF 202
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
RFL P + YT L+ G+CK G ++ A + ++ M G + TYN +
Sbjct: 203 RFL-----PNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRA 257
Query: 264 KVE----------DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K++ A ++ +M + G PD ++ ILL + + K L + K M+
Sbjct: 258 KLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEM 317
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + T T ++ LC + D+A E M+R G+ P+ T+ E++ R A
Sbjct: 318 GICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETA 377
Query: 374 QKL 376
KL
Sbjct: 378 LKL 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 3/192 (1%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + + F ILL + + + + +E+ PTV Y +L +
Sbjct: 282 KGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEM--GICPTVATYTSVLKCLCSCGRI 339
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI-EPNAIVYNT 184
DAE +M + V+PN TY + Y + + A++L +++R+E + +P+ YN
Sbjct: 340 DDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNI 399
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++ ++ RF V+ + GP + +YT LV G C+ + A + MI +G
Sbjct: 400 LLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKG 459
Query: 245 FLPSPTTYNYFF 256
LP T+ +
Sbjct: 460 LLPQKATFEMLY 471
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 33/196 (16%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF------------ 75
PD S F IL+ Y+RA + + + + + + S+
Sbjct: 286 PDVTS---FSILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDA 342
Query: 76 EILLDSLCKQGRVKAASEY------FHKRKELDQSWA------------PTVRVYNILLN 117
E LL+ + + G A+ Y + RK+ + + P+V YNILL
Sbjct: 343 EELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLG 402
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + W ++R P++ +Y LV G C ++ +A + EM ++G+ P
Sbjct: 403 MFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLP 462
Query: 178 NAIVYNTVIDGLVEAG 193
+ + GL+++
Sbjct: 463 QKATFEMLYAGLIQSN 478
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 191/375 (50%), Gaps = 28/375 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L +A +FD+AW L+++ + TF +L RRY AGM A+ F +
Sbjct: 120 VVDALGRAHQFDAAWRLVVEAAAD----GAATSRTFAVLARRYVAAGMTRQAVRAF---D 172
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + A F LLD+LCK K A+E F+KRK + P ++Y IL+ GW
Sbjct: 173 DMEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRK---YKYEPNEKMYTILIYGWC 229
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL------RRVDRAIR----LVKEM 170
+ +++F +M + PNVVTY L+ G CR R DR +R L+KEM
Sbjct: 230 KVNRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEM 289
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKA 227
R GIEP+ Y+ V+ A + E M M+ +C PT+ TYTS++K
Sbjct: 290 RDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGIC---PTVATYTSVIKCLASC 346
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM--IESGYTPDRL 285
G LE A ++L M S G PSP TYN FF+ + V A+ LY+KM S PD
Sbjct: 347 GRLEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIH 406
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+YHILL + K ++ ++ +M DLD+ T+LIH C K+ EA F +M
Sbjct: 407 SYHILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEM 466
Query: 346 IRRGLVPHYLTFKRL 360
I +G +P +TF+ L
Sbjct: 467 IEKGFLPQKITFEIL 481
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 17/253 (6%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM- 201
N Y +V+ R + D A RLV E +G + + + V AG +
Sbjct: 113 NADAYDAVVDALGRAHQFDAAWRLVVEAAADGAA-TSRTFAVLARRYVAAGMTRQAVRAF 171
Query: 202 --MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
ME F+ EP +T+L+ CK + A+++ + + P+ Y +
Sbjct: 172 DDMEAFVGREPDAG--EFTTLLDTLCKYKYPKVATEVFNKRKYK-YEPNEKMYTILIYGW 228
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK------EDKLDLAIQVS----KE 309
K + + + + MI+ G P+ +TY+ILL +C+ +++ D ++ + KE
Sbjct: 229 CKVNRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKE 288
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ RG + D+ + ++++H+ R +K + F M RG+ P T+ + G
Sbjct: 289 MRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGR 348
Query: 370 TALAQKLCNVMSS 382
A++L + M+S
Sbjct: 349 LEDAERLLHEMAS 361
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A E + K K AP + Y+ILL + + W +M + V P++ +Y
Sbjct: 384 VIGALELYKKMKAPASPTAPDIHSYHILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSY 443
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
L+ G+C + A + EM ++G P I + + GL++A
Sbjct: 444 TLLIHGFCENEKWREACQFFMEMIEKGFLPQKITFEILYRGLIQA 488
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 192/375 (51%), Gaps = 28/375 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LA+A++FD+AW +++D S +F +L RRY AGM A+ F+
Sbjct: 126 VVDALARARQFDAAWRVVVDASADGAA----SPRSFAVLARRYVAAGMTRQAVRAFD--- 178
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ ++ ++ F LLD+LCK K A+E F+KRK + P ++Y IL+ GW
Sbjct: 179 DMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRK---YKYNPNEKMYTILIYGWC 235
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------RVDRAIR----LVKEM 170
+ A +F +M + PN+VTY L+ G CR R DR + ++KEM
Sbjct: 236 KVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLKEM 295
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKA 227
R GIEP+ Y+ ++ A + E M M+ +C PT+ TYTS++K
Sbjct: 296 RDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGIC---PTVATYTSVIKCLASC 352
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG--YTPDRL 285
G LE A +L M++ G PSP TYN FF+ + V A+ LY KM + G PD
Sbjct: 353 GRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIH 412
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ILL + K ++ + +M DLD+ T+LIH C K+ EA F +M
Sbjct: 413 TYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEM 472
Query: 346 IRRGLVPHYLTFKRL 360
I +G +P +TF+ L
Sbjct: 473 IEKGFLPQKITFETL 487
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
R D+ PTV Y ++ ++DAE EM E V P+ TY + Y
Sbjct: 328 RSMKDRGICPTVATYTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGR 387
Query: 158 RRVDRAIRLVKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
V A++L +M++ G P+ YN ++ ++ R V + GP +
Sbjct: 388 NDVSGALQLYNKMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLD 447
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+YT L+ G+C + A + MI +GFLP T+ +R
Sbjct: 448 SYTLLIHGFCASQKWREACQFFMEMIEKGFLPQKITFETLYR 489
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFE----------FANNLDMVKNFDSGASL--F 75
PD S + I++ Y+RA E + F A ++K S L
Sbjct: 302 PDVTS---YSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 358
Query: 76 EILLDSLCKQG-------------------RVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E LLD + +G V A + ++K K+ AP + YNILL
Sbjct: 359 ETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILL 418
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + + W +M + V P++ +Y L+ G+C ++ A + EM ++G
Sbjct: 419 GMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFL 478
Query: 177 PNAIVYNTVIDGLVEA 192
P I + T+ GL++A
Sbjct: 479 PQKITFETLYRGLIQA 494
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 194/389 (49%), Gaps = 16/389 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F L+ + + ++KDTF ++ RR+ARA VE AI FE
Sbjct: 163 LIEALGKIKQFK----LIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAIEAFERME 218
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F S F LLD+LCK V+ A++ F K K+ + + P ++ Y ILL GW
Sbjct: 219 EF----GFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKK--RRFVPDIKSYTILLEGWG 272
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ + +LEM+ + P+VVTYG L+ YC+ ++ D AI L EM + +P
Sbjct: 273 KEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPH 332
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VY T+I+GL R E ERF C P TY SLV YC + ++ A +++ M
Sbjct: 333 VYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEM 392
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTPDRLTYHILLKILCKEDK 299
P+ TY+ + K + +A ++KM E G P TY I++++ C ED+
Sbjct: 393 RKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDR 452
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+DLA QV +MK +G + + LI LC K EA F++M+ G+ P F
Sbjct: 453 VDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSN 512
Query: 360 LN----DEFKKRGMTALAQKLCNVMSSVP 384
L DE K LA+K+ N + P
Sbjct: 513 LKQALLDEGKNDEALNLARKI-NKLRGTP 540
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 124/307 (40%), Gaps = 37/307 (12%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YN L+ + K K EM+ + N T+ + + R R+V+ AI + M
Sbjct: 160 YNALIEALGKIKQFKLIRSLVNEMKSRKLL-NKDTFALISRRHARARKVEEAIEAFERME 218
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER------------FLVCEPG-------- 211
+ G + +N ++D L ++ E+ + + ++ + + G
Sbjct: 219 EFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLL 278
Query: 212 ---------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
P +VTY L+ YCKA + A ++ M ++ P+P Y
Sbjct: 279 RLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLI 338
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
++ +A+ + + G+TP+ TY+ L+ C ++D A QV EM+
Sbjct: 339 NGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAG 398
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR-GLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ T +++H L + + +EA F+ M G P T++ + F LA++
Sbjct: 399 PNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQ 458
Query: 376 LCNVMSS 382
+ + M +
Sbjct: 459 VWDQMKA 465
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 47 GMVEAAIWTFEFANN---LDMVKNFDSGAS--LFEILLDSLCKQGRVKAASEYFHKRKEL 101
+V A W+ + +D ++ +G + ++I+L L K R A F K
Sbjct: 371 SLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSN- 429
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ PTV Y I++ + V A++ W +M+ + V P + Y L+ C ++
Sbjct: 430 EPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLG 489
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
A + +EM GI P A +++ + L++ G+ +E + + P +V
Sbjct: 490 EACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLARKINKLRGTPLVV 543
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 190/374 (50%), Gaps = 30/374 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ L +A +FD+AW L+++ G P TF +L RRY AG+ A+ F+
Sbjct: 120 VVDALGRAHQFDAAWRLVVEAAADGAATPR-----TFAVLARRYVAAGLTRQAVRAFD-- 172
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+++ + A F LLD+LCK K A E F+KRK + P ++Y IL+ GW
Sbjct: 173 -DMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRK---YKYEPNEKMYTILIYGW 228
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL----------RRVDRAIRLVKE 169
+ A++F +M + PN+VTY L+ G CR R V+ A L+KE
Sbjct: 229 CKVNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKE 288
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCK 226
M GIEP+ Y+ ++ A + E M M+ +C PT+ TYTS++K
Sbjct: 289 MNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGIC---PTVATYTSVIKCLAS 345
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE--SGYTPDR 284
G LE A +L M+S G PSP TYN FF+ + V A+ LY KM S PD
Sbjct: 346 CGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDI 405
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+Y+ILL + K D+ + +++ +M R DLD+ T+L+H C K+ EA F +
Sbjct: 406 HSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFME 465
Query: 345 MIRRGLVPHYLTFK 358
MI +G +P +TF+
Sbjct: 466 MIEKGFLPQKITFE 479
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 50/288 (17%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI-------------------------- 175
PN Y +V+ R + D A RLV E +G
Sbjct: 112 PNADAYDAVVDALGRAHQFDAAWRLVVEAAADGAATPRTFAVLARRYVAAGLTRQAVRAF 171
Query: 176 ---------EPNAIVYNTVIDGLVEAGRFEEVSGMM--ERFLVCEPGPTMVTYTSLVKGY 224
EP+A + T++D L + ++ +V+ + +R EP M YT L+ G+
Sbjct: 172 DDMEAFLGREPDAQEFTTLLDTLCKY-KYPKVAVEVFNKRKYKYEPNEKM--YTILIYGW 228
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK----------VEDAMNLYRK 274
CK + A K LK MI G P+ TYN + V A NL ++
Sbjct: 229 CKVNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKE 288
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G PD +Y I+L + + K +L + + + MK RG + T T +I L +
Sbjct: 289 MNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGR 348
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++A + +M+ G+ P T+ E++ R + A +L N M +
Sbjct: 349 LEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKA 396
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ PTV Y ++ ++DAE EM E V P+ TY + Y + V
Sbjct: 326 DRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVS 385
Query: 162 RAIRLVKEMRK--EGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMV 215
A+ L +M+ P+ YN ++ ++ R E V + M ER + GP +
Sbjct: 386 GALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAV----GPDLD 441
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+YT LV G+C A + MI +GFLP T+ +R
Sbjct: 442 SYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPYR 483
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A E ++K K AP + YNILL + + + W +M + V P++ +Y
Sbjct: 384 VSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSY 443
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
LV G+C + A + EM ++G P I + T GL++A
Sbjct: 444 TLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPYRGLIQA 488
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 191/375 (50%), Gaps = 28/375 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L +A++FD+AW +++D S TF +L RRY AGM AI F +
Sbjct: 124 VVDALGRARQFDAAWRVVVDA----SADGAASPRTFAVLARRYVAAGMTRQAIRAF---D 176
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + + A+ F LLD+LCK K A+E F+KRK + P ++Y+IL+ GW
Sbjct: 177 DMEAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRK---YKYGPNEKMYSILIYGWC 233
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------RVDRAIR----LVKEM 170
+ A++F +M + PN+VTY L+ G CR R DR + L+KEM
Sbjct: 234 KVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEM 293
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKA 227
R GIEP+ Y+ ++ A + E M M+ +C PT+ TYTS++K
Sbjct: 294 RGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGIC---PTVATYTSVIKCLSSC 350
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG--YTPDRL 285
G LE +L M++ G PSP TYN F + + V A+ LY KM G PD
Sbjct: 351 GRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIH 410
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ILL + K ++ + + +M DLD+ T+LIH C K+ EA F +M
Sbjct: 411 TYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEM 470
Query: 346 IRRGLVPHYLTFKRL 360
I +G +P +TF+ L
Sbjct: 471 IEKGFLPQKITFETL 485
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV Y ++ ++D E EM E V P+ TY ++ Y + V A+ L
Sbjct: 335 PTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALEL 394
Query: 167 VKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+M+ G P+ YN ++ + R V + GP + +YT L+ +
Sbjct: 395 YNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCF 454
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
C + A + MI +GFLP T+ +R
Sbjct: 455 CDSQKWREACQFFMEMIEKGFLPQKITFETLYR 487
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFE----------FANNLDMVK 66
LL ++ G + PD S + I++ Y+RA E + F A ++K
Sbjct: 289 LLKEMRGRGIEPDVTS---YSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIK 345
Query: 67 NFDSGASL--FEILLDSLCKQG-------------------RVKAASEYFHKRKELDQSW 105
S L EILLD + +G V AA E ++K K
Sbjct: 346 CLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLT 405
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP + YNILL + + W +M + V P++ +Y L+ +C ++ A +
Sbjct: 406 APDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQ 465
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM ++G P I + T+ GL++A
Sbjct: 466 FFMEMIEKGFLPQKITFETLYRGLIQA 492
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 193/363 (53%), Gaps = 13/363 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIK+L K ++F + W L+ + E P FVS FV+L+RR+A A MV+ AI +
Sbjct: 128 MIKILGKMRQFGAVWALIEEM--RRENPQFVSPYVFVVLMRRFASARMVKKAIEVLD--- 182
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK A+ F +++ + PT++ + LL GW
Sbjct: 183 --EMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLF---EDMRIRFTPTLKHFTSLLYGW 237
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ +++R+ P++V Y L+ GY ++ A L+KEMR++ EPN
Sbjct: 238 CREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNV 297
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ + T+I L + EE + C VTYT+L+ G+CK G + ++L
Sbjct: 298 MSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDN 357
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G +P+P TY + K ++E+ + L +M + G TPD Y+I++++ CK +
Sbjct: 358 MIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGE 417
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHYLTF 357
+ ++V EM+ G LDT ++IH EA F++M+ RGL+ P Y T
Sbjct: 418 IKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTL 477
Query: 358 KRL 360
K L
Sbjct: 478 KEL 480
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 126/237 (53%), Gaps = 6/237 (2%)
Query: 134 EMRKEN---VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
EMR+EN V+P V + L+ + R V +AI ++ EM K G EP+ V+ ++D L
Sbjct: 147 EMRRENPQFVSPYV--FVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALC 204
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G +E + + E + PT+ +TSL+ G+C+ G L A +L + GF P
Sbjct: 205 KNGSVKEAASLFEDMRI-RFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIV 263
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
YN ++ GK+ DA +L ++M P+ +++ L++ LC + K++ A++V EM
Sbjct: 264 VYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEM 323
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ GC D T T LI C+ K + ++MI++G +P+ +T+ + +K+
Sbjct: 324 QSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKK 380
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 199/375 (53%), Gaps = 27/375 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +AK ++FD AW L+++ H + + TF+ LIRR AG+ A+ F +
Sbjct: 107 LIDTMAKVRQFDVAWQLIVEMDQRHHLTP--TPSTFLTLIRRLICAGLTRQAVRAF---H 161
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++D + F +LLD+LCK G V+ A E F+K K ++ PTV++Y +L+ GW
Sbjct: 162 DIDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNK---HTFPPTVKMYTVLIYGWC 218
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL------RRVDRAIRLVKE----M 170
+ +K A+ F EM + + PNVVTY L+ G CR R +R IR +E M
Sbjct: 219 KIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQM 278
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
R+ GIEP+ ++ ++ A + +++S M E+ +C P +V YTS++K
Sbjct: 279 RESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKG-IC---PNVVMYTSVIKCLAS 334
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRL 285
G LE A ++L M+ G P TYN FF+ F E A+ ++++M E G P
Sbjct: 335 CGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSH 394
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY IL+++ + D + + ++ ++MK G DLD T+LIH LC ++ EA F +M
Sbjct: 395 TYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEM 454
Query: 346 IRRGLVPHYLTFKRL 360
I G +P TF+ L
Sbjct: 455 IENGFLPLKGTFESL 469
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 48/275 (17%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEAG----------- 193
++ L++ ++R+ D A +L+ EM ++ + P + T+I L+ AG
Sbjct: 103 SFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAVRAFHD 162
Query: 194 --RFEEVSGMMERFLV-----CEPG-----------------PTMVTYTSLVKGYCKAGD 229
F E + F V C+ G PT+ YT L+ G+CK G
Sbjct: 163 IDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKIGR 222
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFF----RYFS-----KFGK-VEDAMNLYRKMIESG 279
++ A L MI +G P+ TYN R S +F + + +A ++ +M ESG
Sbjct: 223 IKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESG 282
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD ++ ILL + + K L + MK +G ++ T +I L ++A
Sbjct: 283 IEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAE 342
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKR--GMTAL 372
+M+R G+ P T+ EF+ R G +AL
Sbjct: 343 RLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESAL 377
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 97 KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
KR + D P+ Y IL+ + R +K + W +M++ P++ Y L+ G C
Sbjct: 381 KRMKEDGLCMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCE 440
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+R A EM + G P + ++ GL++A
Sbjct: 441 RQRWREACHYFVEMIENGFLPLKGTFESLYRGLIQA 476
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 193/364 (53%), Gaps = 15/364 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIK+L K ++F + W L+ + E P FVS FV+L+RR+A A MV+ AI
Sbjct: 161 MIKILGKMRQFGAVWALIEEM--RRENPQFVSPYVFVVLMRRFASARMVKKAI------E 212
Query: 61 NLDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD + + + +F LLD+LCK G VK A+ F +++ + PT++ + LL G
Sbjct: 213 VLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLF---EDMRIRFTPTLKHFTSLLYG 269
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W R + +A+ +++R+ P++V Y L+ GY ++ A L+KEMR++ EPN
Sbjct: 270 WCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPN 329
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ + T+I L + EE + C VTYT+L+ G+CK G + ++L
Sbjct: 330 VMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLD 389
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI +G +P+P TY + K ++E+ + L +M + G TPD Y+I++++ CK
Sbjct: 390 NMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLG 449
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHYLT 356
++ ++V EM+ G LDT ++IH EA F++M+ RGL+ P Y T
Sbjct: 450 EIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGT 509
Query: 357 FKRL 360
K L
Sbjct: 510 LKEL 513
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 126/237 (53%), Gaps = 6/237 (2%)
Query: 134 EMRKEN---VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
EMR+EN V+P V + L+ + R V +AI ++ EM K G EP+ V+ ++D L
Sbjct: 180 EMRRENPQFVSPYV--FVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALC 237
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G +E + + E + PT+ +TSL+ G+C+ G L A +L + GF P
Sbjct: 238 KNGSVKEAASLFEDMRI-RFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIV 296
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
YN ++ GK+ DA +L ++M P+ +++ L++ LC + K++ A++V EM
Sbjct: 297 VYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEM 356
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ GC D T T LI C+ K + ++MI++G +P+ +T+ + +K+
Sbjct: 357 QSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKK 413
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 192/381 (50%), Gaps = 15/381 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L+ D ++++TF ++ RRYARA V+ A+ TFE
Sbjct: 151 LIEALGKIKQFKMIWNLVNDM----RSKGLLTQETFALISRRYARARKVKEAVETFEKME 206
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ S F LLD+LCK V+ A E F K K D+ + P ++ Y ILL GW
Sbjct: 207 KFGL----QPVLSDFNRLLDALCKSRHVERAQEVFDKMK--DRKFRPDIKSYTILLEGWG 260
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +N+ + + EM+ E P+ VTYG L+ +C+ RR D A+ L +M P
Sbjct: 261 QEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPH 320
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y T+I+GL R E ER P TY ++V YC++ ++ A +I+ M
Sbjct: 321 IYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEM 380
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKILCKEDK 299
G P TY+ + K + ++A +++ M E G P TY I++++ C E++
Sbjct: 381 RKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEER 440
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D+A++V EMK +G + + LI+ LC K DEA F +M+ G+ P F
Sbjct: 441 VDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSN 500
Query: 360 LN----DEFKKRGMTALAQKL 376
L DE K+ + LAQKL
Sbjct: 501 LKQTLLDEGKQDMVLILAQKL 521
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 1/308 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++L+ L K + F + E + + + YN L+ + K K +MR
Sbjct: 113 LVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMR 172
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ + T+ + Y R R+V A+ ++M K G++P +N ++D L ++ E
Sbjct: 173 SKGLLTQE-TFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVE 231
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ ++ + P + +YT L++G+ + +L ++ + M GF P TY
Sbjct: 232 RAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILI 291
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K + + A+ L+ KM + P Y L+ L E +L A+Q + K G
Sbjct: 292 NAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFT 351
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T ++ C+ + D+A ++M + G+ P T+ + K T A ++
Sbjct: 352 PEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRV 411
Query: 377 CNVMSSVP 384
MSS P
Sbjct: 412 FQGMSSEP 419
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 205/404 (50%), Gaps = 20/404 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L+KA+ A +L + + VPD T ++++ V+ A E
Sbjct: 45 LVHGLSKARRLRDAVQVLQEMVSARHVPD---NTTLTVVVQSLCLGDRVDDARELVEEML 101
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ M N A + L+D LCK R+ A E + APTV YN ++ G+
Sbjct: 102 HRGMAAN----AITYSALVDGLCKCERLDEAVALVETMAE--RGCAPTVVTYNSIITGFC 155
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R++ V +A F +M E P+++TY L+ G+C+ R V R + L+ E+ + G P+ +
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIV 215
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+TVIDGL +AGR + + E + C PT +TY SL+ GYC+AGD++ A ++L M
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEE-MSC--APTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P TY F K G+++DA L+++M+ + +PD +T+ L+ LC E ++
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+++ +E+ RGC + T ++ C+ + +A D RG VP+ +T+ L
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392
Query: 361 NDEFKKRGMTALAQKLCNVMSS----VPRSMEL----LDSRCKD 396
+ G T A + + ++S P S+ + LD+ C+D
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRD 436
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 159/313 (50%), Gaps = 7/313 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ F + ++D LCK GR++ A + F + S APT YN L+ G+ R+ ++
Sbjct: 208 RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE-----EMSCAPTAITYNSLIGGYCRAGDM 262
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A R +M + P+VVTY TL+ +C++ R+D A L ++M + P+ + + ++
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+DGL GR E+ ++E PT+ TY +V GYCKA + A +++ SRGF
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLT-YHILLKILCKEDKLDLA 303
+P+ TYN + G+ + A+ ++ E G P + Y I+L LC++ + D A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+Q +EM RG T ++ LC+ ++ +A E+MI+ G P T +
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502
Query: 364 FKKRGMTALAQKL 376
+ + GM A +L
Sbjct: 503 YCRAGMIQKADEL 515
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 152/333 (45%), Gaps = 35/333 (10%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
+ G L +++ LC+ GR++ A + ++++ + P Y L++G +++ ++D
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVY---RQMNDAHPPDFLTYTKLVHGLSKARRLRD 57
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + EM P+ T +V+ C RVD A LV+EM G+ NAI Y+ ++D
Sbjct: 58 AVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 117
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL + R +E ++E PT+VTY S++ G+C+A ++ A ++ M++ G P
Sbjct: 118 GLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHP 177
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TY F K V + L ++ G+TPD +TY ++ LCK +L A+ +
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 237
Query: 308 KEMKCRG--------------------------------CDIDLDTSTMLIHLLCRMYKF 335
+EM C C D+ T T L+ C+M +
Sbjct: 238 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+A F+ M+ L P +TF L D G
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEG 330
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 12/281 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI Y RAG ++ AI MV + + L+ + CK GR+ A E
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLG-----KMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + + +P V + L++G ++DA E+ + P + TY +V+G
Sbjct: 303 LFQQM--VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP- 212
YC+ +V +A LV + R G PN + YN ++ G AGR ++ +++ L E GP
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ-LNSEGGPC 419
Query: 213 --TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
++ Y ++ C+ G + A + + MI RG++P+ T+ K + + A
Sbjct: 420 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHE 479
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
L +MI+ G+TP T ++ C+ + A +++ E++
Sbjct: 480 LLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 103/248 (41%), Gaps = 36/248 (14%)
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ P +++N VI GL AGR G+ + P P +TYT LV G KA L A
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAV 59
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++L+ M+S +P TT + +V+DA L +M+ G + +TY L+ L
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-------- 346
CK ++LD A+ + + M RGC + T +I CR + DEA E M+
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179
Query: 347 ---------------------------RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
RRG P +T+ + D K G A +
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239
Query: 380 MSSVPRSM 387
MS P ++
Sbjct: 240 MSCAPTAI 247
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 194/381 (50%), Gaps = 11/381 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K + FD W ++D + V +S +TF ILIRRY RAG+ A+ F
Sbjct: 148 MIDLAGKVRNFDLGW-QVIDLMKARNVE--ISIETFSILIRRYVRAGLASEAVHAFNRME 204
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N F IL+ LC++ R A +F L + P V VY L+ GW
Sbjct: 205 DY----NCKPDKIAFSILISILCRKRRATEAQSFF---DSLKDKFEPDVIVYTNLVRGWC 257
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N+ +AER + EM+ PNV TY +++ CR ++ RA + EM G EPN+I
Sbjct: 258 RAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSI 317
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N ++ V+AGR E+V + + P VTY L++ +CK G+L+ A K+L M
Sbjct: 318 TFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM 377
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G P+ +T+N F +K V A LY KM E + +TY+IL+++
Sbjct: 378 VKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKST 437
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTFKR 359
D+ +++ KEM + +++T +LI + C M ++ A F +M+ + L P +++
Sbjct: 438 DMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEK 497
Query: 360 LNDEFKKRGMTALAQKLCNVM 380
+ + +K G ++L VM
Sbjct: 498 VLQQLRKAGQLKKHEELVAVM 518
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 9/217 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+R + +AG E + + + + + L++S CK G + A +
Sbjct: 318 TFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPD----TVTYNFLIESHCKDGNLDEALKV 373
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + +P +N L + ++V A R + +M++ N VTY L+ +
Sbjct: 374 LNSM--VKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMF 431
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP--GP 212
+ D ++L KEM ++ +EPN Y +I G + R +V E P
Sbjct: 432 VDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFF-REMVEEKCLKP 490
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
++ Y +++ KAG L+ +++ +M+ RGF P
Sbjct: 491 SLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFATRP 527
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 40/220 (18%)
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y ++ K + + +++ +M +R S T++ R + + G +A++ + +M
Sbjct: 145 YNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRME 204
Query: 277 ESGYTPDRLTYHILLKILCK--------------EDKLDL-------------------- 302
+ PD++ + IL+ ILC+ +DK +
Sbjct: 205 DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPE 264
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A +V EMK GC ++ T T++I LCR + A F +M+ G P+ +TF L
Sbjct: 265 AERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLR 324
Query: 363 EFKKRGMTALAQKLCNVMSSV---PRSME---LLDSRCKD 396
K G T ++ N M + P ++ L++S CKD
Sbjct: 325 VHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKD 364
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 198/368 (53%), Gaps = 14/368 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ ILI + ++ A + +M+ K+ A+++ L+ LCK G++ AA
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLD-----EMIQKDCHPDAAVYNCLIAGLCKMGKIDAARN 148
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ L++S P V Y L+ G ++ + +A + +M++ +TP+ V Y L+ G
Sbjct: 149 VL--KMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNG 206
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +++ +L++EM + G EP+ YNTV+ L E+G++EE ++E+ + + GP
Sbjct: 207 LCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPD 266
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY SL+ G+CK ++ A ++L+ M+ R P+ TY FS+ ++ DA +
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVME 326
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M ++G +PD +TY+ LL LCK KL+ A ++ + M + C D+ T ++L++ LC++
Sbjct: 327 DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG 386
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME----- 388
K D+A E M+ RG P+ +TF + D F K G K+ +M V + +
Sbjct: 387 KVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYS 446
Query: 389 -LLDSRCK 395
L+D CK
Sbjct: 447 TLIDGYCK 454
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 187/386 (48%), Gaps = 33/386 (8%)
Query: 6 AKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV 65
K + D A LL D +G P + T+ LI ++RA + A E DM
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVI---TYTTLIGGFSRADRLADAYRVME-----DM- 328
Query: 66 KNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
F +G S + LLD LCK G+++ A E E D AP V Y+IL+NG +
Sbjct: 329 --FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD--CAPDVVTYSILVNGLCK 384
Query: 122 SKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V DA R LEM E PN+VT+ T+++G+C+ +VD ++++ M++ P+ +
Sbjct: 385 LGKVDDA-RLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+T+IDG +A R M + F + P +Y+S+++G C G +E A +++ +M
Sbjct: 444 TYSTLIDGYCKANR------MQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLM 497
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ + Y + ++A+ + + M E G P+ TY IL+ LCK ++
Sbjct: 498 TKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRV 557
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ AI V M +GC D+ T T LI C++ K D A F+ M G P L + L
Sbjct: 558 EDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNIL 617
Query: 361 NDEFKKRG--------MTALAQKLCN 378
F + G M + +K CN
Sbjct: 618 ISGFCQSGNVEKAIEVMQLMLEKGCN 643
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 195/413 (47%), Gaps = 44/413 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVI-------------LIRRYARAG 47
+I L K + D+A +L + VPD ++ + ++ L+ + +G
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192
Query: 48 MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS---------------LCKQGRVKAAS 92
+ + N L + + L E ++++ LC+ G+ + A
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG 252
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+ K +++ P V YN L++G+ + + +AER +M P V+TY TL+
Sbjct: 253 KILEKM--IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIG 310
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G+ R R+ A R++++M K GI P+ + YN ++DGL +AG+ EE ++E + + P
Sbjct: 311 GFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+VTY+ LV G CK G ++ A +L+MM+ RG P+ T+N F K GKV++ +
Sbjct: 371 DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL 430
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M E TPD +TY L+ CK +++ A + G D + + ++ LC
Sbjct: 431 ELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKASYSSMLEGLCST 484
Query: 333 YKFDEASAEFEDMIRRGLVP---HY-LTFKRLNDEFKKRGMTALAQKLCNVMS 381
K +EA + M ++G P HY L L D +RG AL K+ VMS
Sbjct: 485 GKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCD--VERGDEAL--KMLQVMS 533
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 10/354 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P S T+ LI ++RAG + E AN + + + F +L + C+ G
Sbjct: 19 PSKPSNSTYGALITGFSRAG---NSKMVLEIANEM-LARRFSPDVITHNTILKAYCQIGD 74
Query: 88 VKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A +F + W +PT Y IL++G + + + +A + EM +++ P+
Sbjct: 75 LDRALSHFRGKM-----WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAV 129
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G C++ ++D A ++K M + P+ I Y ++I G + +E +ME+
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P V Y +L+ G CK LE SK+L+ M+ G P +YN + GK E
Sbjct: 190 ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A + KMIE PD +TY+ L+ CK K+D A ++ ++M R C + T T LI
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
R + +A EDM + G+ P +T+ L D K G A +L VM
Sbjct: 310 GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 6/323 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S + L+ + G K E ++ L + ++P V +N +L + + + D +R
Sbjct: 25 STYGALITGFSRAGNSKMVLEIANEM--LARRFSPDVITHNTILKAYCQ---IGDLDRAL 79
Query: 133 LEMR-KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
R K +P TY L+ G C+ +R+D A +L+ EM ++ P+A VYN +I GL +
Sbjct: 80 SHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ + +++ L P ++TYTSL+ G C+ L+ A K+++ M G P
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN K ++E+ L +M+E+G PD +Y+ ++ LC+ K + A ++ ++M
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ C D+ T L+ C++ K DEA EDM+ R P +T+ L F + A
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319
Query: 372 LAQKLCNVMSSVPRSMELLDSRC 394
A ++ M S +L+ C
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNC 342
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 2/290 (0%)
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V+ Y R+ P+ Y L+ G+ R+ N K EM +P+V+T
Sbjct: 2 KVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ T+++ YC++ +DRA+ + K P A Y +I GL + R +E +++ +
Sbjct: 62 HNTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMI 119
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P Y L+ G CK G ++ A +LKMM+ R +P TY + ++
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L KM ESG TPD + Y+ LL LCK+++L+ ++ +EM G + D + ++
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC K++EA E MI + P +T+ L D F K A++L
Sbjct: 240 ACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERL 289
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 38/322 (11%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KA + + A LL + PD V T+ IL+ + G V+ A E +
Sbjct: 347 LCKAGKLEEAHELLEVMVEKDCAPDVV---TYSILVNGLCKLGKVDDARLLLEMM----L 399
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ F ++D CK G+V + KE+ S P V Y+ L++G+ ++
Sbjct: 400 ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV--SCTPDVVTYSTLIDGYCKANR 457
Query: 125 VKDA-----------------------------ERFWLEMRKENVTPNVVTYGTLVEGYC 155
++DA + M K+ P Y ++ G C
Sbjct: 458 MQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ R D A+++++ M + G EPN Y+ +I+GL + R E+ +++ L P +
Sbjct: 518 DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVA 577
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TYTSL+ G+CK ++ A + K M G P YN F + G VE A+ + + M
Sbjct: 578 TYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM 637
Query: 276 IESGYTPDRLTYHILLKILCKE 297
+E G PD TY L++ L E
Sbjct: 638 LEKGCNPDAATYFSLMRSLTTE 659
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 197/384 (51%), Gaps = 17/384 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ + FD AW +D + V V+ +TF+IL+RRY RAG+ AI F
Sbjct: 100 MVDFSGQVMMFDVAW-YFIDLMKARNVD--VTVETFLILMRRYVRAGLAAEAIHAFNRME 156
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N F IL+ LC++ R A E+F K+ + P V VY L+ GW
Sbjct: 157 DY----NCKPDKIAFSILISILCRERRASQAQEFFDSLKD---KFEPDVIVYTNLVRGWC 209
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N+ +AER + EM+ + PNV TY +++ CR ++ RA + EM G +PN+I
Sbjct: 210 RAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSI 269
Query: 181 VYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
YN+++ V+AGR E +V M+R L CEP VTY L++ +CK +LE A K++
Sbjct: 270 TYNSLMRIHVKAGRTEKVLQVYNQMKR-LGCEPD--TVTYNFLIETHCKDENLEDAIKVI 326
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+M +G P+ +T+N F +K G V A +Y+KM E + +TY+ L+K+
Sbjct: 327 GLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVAS 386
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLT 356
D+ +++ EM + +++T +LI + C M ++ A F +MI + L P
Sbjct: 387 KSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPV 446
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
+ + + +K G ++L M
Sbjct: 447 YDMVLQQLRKAGQLKKHEELVEKM 470
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 9/217 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+R + +AG E + + L + + L+++ CK ++ A +
Sbjct: 270 TYNSLMRIHVKAGRTEKVLQVYNQMKRLGC----EPDTVTYNFLIETHCKDENLEDAIKV 325
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + AP +N L + +V A R + +M++ N N VTY TL++ +
Sbjct: 326 IGLMAK--KGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMF 383
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
+ D ++L EM + IEPN Y +I G + R ++ E P
Sbjct: 384 VASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFF-REMIDEKCLRP 442
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
++ Y +++ KAG L+ ++++ M+ RGF+ P
Sbjct: 443 SLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGFVTRP 479
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 179/337 (53%), Gaps = 10/337 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + A + + +L LC G+ A +F +E+ ++ P YN ++NG +S +
Sbjct: 4 KGLKAHAGVHKSILRGLCDAGQCSDAVLHF---REMSKTCPPDSVTYNTMINGLSKSDRL 60
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
DA R EM PNV +Y T++ G+C+ RV+ A+ L+++M G P+ + Y TV
Sbjct: 61 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I+GL + + +E +M++ + P ++TY +LV G+C+ GDL+GA ++++ M RG+
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRLTYHILLKILCKEDKLDLAI 304
P+ TYN K++ A+ L+++M ESG PD TY ++ L K K+D A
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ + M +GC ++ T + L+H LC+ K DEA+A + M R G P+ +T+ + D
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300
Query: 365 KKRGMTALAQKLCNVM------SSVPRSMELLDSRCK 395
K G A L M +V LLD+ CK
Sbjct: 301 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 337
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 196/412 (47%), Gaps = 37/412 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--- 57
MI L+K+ D A LL + + P+ S +T ++ + +A VE A+W E
Sbjct: 50 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNT---VLHGFCKANRVENALWLLEQMV 106
Query: 58 -------------FANNLDMVKNFDSGASLFE---------------ILLDSLCKQGRVK 89
N L + D + + L+D C+ G +
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYG 148
A E RK ++ + P YN +++G + + A + + EM + + P+V TY
Sbjct: 167 GAVELV--RKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T+V+ + +VD A RLV+ M +G PN + Y++++ GL +AG+ +E + +++R
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P +VTY +++ G+CK G ++ A +L+ M+ G P+ TY F K GK EDA
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ L M+E GY P+ TY+ LL + CK+D+++ A Q+ M +GC ++ + +I
Sbjct: 345 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 404
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LC+ K E E M+ VP +TF + D K +A +L N++
Sbjct: 405 LCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 456
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 183/361 (50%), Gaps = 10/361 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDK-IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K + D A C ++DK I P+ + T+ L+ + R G ++ A+ E
Sbjct: 120 VINGLCKLDQVDEA-CRVMDKMIQRGCQPNVI---TYGTLVDGFCRVGDLDGAV---ELV 172
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ + + A + ++ LC ++ +A + F K E S P V Y+ +++
Sbjct: 173 RKM-TERGYRPNAITYNNIMHGLCSGRKLDSALQLF-KEMEESGSCPPDVFTYSTIVDSL 230
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S V DA R M + +PNVVTY +L+ G C+ ++D A L++ M + G PN
Sbjct: 231 VKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 290
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+IDG + GR +E ++E + P +VTYT L+ +CK G E A ++++
Sbjct: 291 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ +G++P+ TYN F K +VE A L MI+ G P+ ++Y+ ++ LCK K
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ + + ++M C D+ T +I +C+ Y+ D A F + G P+ +T+
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470
Query: 360 L 360
L
Sbjct: 471 L 471
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 190/365 (52%), Gaps = 20/365 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--F 58
++ + K E + A LL I VP+ VS +T +I +A V + E
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT---VIAGLCKATKVHEGVLLLEQML 422
Query: 59 ANNL--DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+NN D+V F ++D++CK RV A E F+ +E P + YN L+
Sbjct: 423 SNNCVPDIVT--------FNTIIDAMCKTYRVDIAYELFNLIQE--SGCTPNLVTYNSLV 472
Query: 117 NGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+G +S+ AE EM RK+ +P+++TY T+++G C+ +RVDRA +L +M +G+
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + Y+ VI L + +E + ++E L P +TY +L+ G+CK G+L+ A +
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 592
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
IL++++S+G P T++ F + SK G++ A L M+ +G PD +TY+ LLK C
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF-EDMIRRGL-VPH 353
+ + A+ + + M+ GC+ D T T L+ L + + AE + M+ G + H
Sbjct: 653 DASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNH 712
Query: 354 YLTFK 358
L+ K
Sbjct: 713 ELSSK 717
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 181/378 (47%), Gaps = 14/378 (3%)
Query: 6 AKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV 65
K D A+ LL + + G P+ V T+ +L+ + + G E AI E V
Sbjct: 301 CKLGRIDEAYHLLEEMVDGGCQPNVV---TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 357
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
N + + LLD CK+ V+ A + + + P V YN ++ G ++ V
Sbjct: 358 PNLFT----YNSLLDMFCKKDEVERACQLLSSM--IQKGCVPNVVSYNTVIAGLCKATKV 411
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ +M N P++VT+ T+++ C+ RVD A L +++ G PN + YN++
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471
Query: 186 IDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+ GL ++ RF++ + M R C P ++TY +++ G CK+ ++ A K+ M+S
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSP--DIITYNTVIDGLCKSKRVDRAYKLFLQMLS 529
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G P TY+ K+ +++A N+ M+++G+ P +TY L+ CK LD
Sbjct: 530 DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDK 589
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A+++ + + +G D+ T ++ I L + + +A E M+R GLVP +T+ L
Sbjct: 590 ALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 649
Query: 363 EFKKRGMTALAQKLCNVM 380
F T A L VM
Sbjct: 650 GFCDASRTEDAVDLFEVM 667
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 181/370 (48%), Gaps = 12/370 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K+ + D A L+ + P+ V T+ L+ +AG ++ A +
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVV---TYSSLLHGLCKAGKLDEATALLQRMT 282
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGW 119
N + + ++D CK GR+ E +H +E+ D P V Y +LL+ +
Sbjct: 283 RSGCSPNIVT----YNTIIDGHCKLGRI---DEAYHLLEEMVDGGCQPNVVTYTVLLDAF 335
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +DA M ++ PN+ TY +L++ +C+ V+RA +L+ M ++G PN
Sbjct: 336 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 395
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNTVI GL +A + E ++E+ L P +VT+ +++ CK ++ A ++ +
Sbjct: 396 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNL 455
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTPDRLTYHILLKILCKED 298
+ G P+ TYN K + + A L R+M + G +PD +TY+ ++ LCK
Sbjct: 456 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 515
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D A ++ +M G D T +++I LC+ DEA+ E M++ G P +T+
Sbjct: 516 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 575
Query: 359 RLNDEFKKRG 368
L D F K G
Sbjct: 576 TLIDGFCKTG 585
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 166/356 (46%), Gaps = 11/356 (3%)
Query: 5 LAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
L ++ DSA L + + G PD T+ ++ ++G V+ A E
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVF---TYSTIVDSLVKSGKVDDACRLVEAM---- 246
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K + LL LCK G++ A+ + +P + YN +++G +
Sbjct: 247 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR--SGCSPNIVTYNTIIDGHCKLG 304
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +A EM PNVVTY L++ +C+ + + AI LV+ M ++G PN YN
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 364
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+++D + E ++ + P +V+Y +++ G CKA + +L+ M+S
Sbjct: 365 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 424
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+P T+N K +V+ A L+ + ESG TP+ +TY+ L+ LCK + D A
Sbjct: 425 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484
Query: 304 IQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ +EM + +GC D+ T +I LC+ + D A F M+ GL P +T+
Sbjct: 485 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS 540
>gi|226504166|ref|NP_001142384.1| hypothetical protein [Zea mays]
gi|194708572|gb|ACF88370.1| unknown [Zea mays]
gi|223949905|gb|ACN29036.1| unknown [Zea mays]
gi|413934770|gb|AFW69321.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 303
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Query: 207 VCEPG-PT-MVTYTSLVKG-YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+C P P+ M + V G + + GDL GAS++LK M+ RG P+ TYNYFF F++
Sbjct: 42 ICSPATPSFMRLHMQAVSGTHTRHGDLAGASRVLKAMLGRGISPTARTYNYFFTVFARNL 101
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++ MNLY KM+ +GY PDRLTYH+L+K+LC+ ++L+L +Q+ +EM+ G + DL TST
Sbjct: 102 SIDLGMNLYVKMVSNGYAPDRLTYHLLIKMLCEANRLELTLQMLQEMRNSGFEPDLATST 161
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
MLIHLLCR ++F+EA AEFE M RG+VP Y+T++ L E K+ G+ L QKL ++M SV
Sbjct: 162 MLIHLLCRRHQFEEAFAEFEQMFERGMVPQYITYRMLMRELKRLGLVKLVQKLADLMRSV 221
Query: 384 PRSMEL 389
P S +L
Sbjct: 222 PHSTKL 227
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G + AS + L + +PT R YN + R+ ++ +++M P+
Sbjct: 64 RHGDLAGASRVL--KAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPD 121
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----S 199
+TY L++ C R++ +++++EMR G EP+ +I L +FEE
Sbjct: 122 RLTYHLLIKMLCEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAEFE 181
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
M ER +V P +TY L++ + G ++ K+ +M S
Sbjct: 182 QMFERGMV----PQYITYRMLMRELKRLGLVKLVQKLADLMRS 220
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 58/146 (39%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R ++ A R M ++P TY + R +D + L +M G P+ +
Sbjct: 64 RHGDLAGASRVLKAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPDRL 123
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I L EA R E M++ P + T T L+ C+ E A + M
Sbjct: 124 TYHLLIKMLCEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAEFEQM 183
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVE 266
RG +P TY R + G V+
Sbjct: 184 FERGMVPQYITYRMLMRELKRLGLVK 209
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 188/370 (50%), Gaps = 22/370 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +L + ++FD L+++ D S +TF+IL++R AG+ A+ F+ A
Sbjct: 111 IIDILGRVRQFDVVRQLIVEM-------DQTSPETFLILVKRLIAAGLTRQAVRAFDDAP 163
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++N F LLD+LCK G K A F++RKE + +VY IL+ GW
Sbjct: 164 CF--LENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKE---EFGSDEKVYTILIAGWC 218
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL----------RRVDRAIRLVKEM 170
+ + + AE+F +EM + + PNVVTY L+ G CR R V A ++ EM
Sbjct: 219 KLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEM 278
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
R+ GIEP+ ++ V+ A + E M+ PT+ TYTS+VK C G L
Sbjct: 279 RQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRL 338
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++L+ M+ G PS TYN FF+ + AMNLYRKM P TY++L
Sbjct: 339 EEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVL 398
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L K++ ++ ++K DLD+ T L+H LC K+ EA F +MI RG
Sbjct: 399 LGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGF 458
Query: 351 VPHYLTFKRL 360
+P LTF+ L
Sbjct: 459 LPQKLTFETL 468
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+PT+ Y ++ +++AE M + ++P+ TY + Y + + A+
Sbjct: 319 SPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMN 378
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L ++M+ +P+ YN ++ + G+ E V + + E GP + +YTSLV G C
Sbjct: 379 LYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLC 438
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
+ A MI RGFLP T+ ++ + K+ L +K+ E T
Sbjct: 439 SKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESIT 494
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 50/316 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT--VRVYNILLNGWFRS--KNVKDAER 130
F +++D L GRV+ E+DQ+ T + V ++ G R + DA
Sbjct: 108 FNLIIDIL---GRVRQFDVVRQLIVEMDQTSPETFLILVKRLIAAGLTRQAVRAFDDAPC 164
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F EN +V +G L++ C+ A+ + E RKE + VY +I G
Sbjct: 165 FL-----ENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNE-RKEEFGSDEKVYTILIAGWC 218
Query: 191 EAGRFEEVSGMMERFLV--CEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ R + M E+FLV E G P +VTY L+ G C+ L + +
Sbjct: 219 KLRRID----MAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFER-------- 266
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
V +A ++ +M + G PD ++ I+L + + K +L +
Sbjct: 267 -----------------NVRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDK 309
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
K MK +G ++T T ++ LC + +EA E M+ G+ P T+ E+K
Sbjct: 310 MKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKG 369
Query: 367 R----GMTALAQKLCN 378
R G L +K+ N
Sbjct: 370 RKDANGAMNLYRKMKN 385
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
+GR A RK + P+ + YN+LL + ++ + W +++ P++
Sbjct: 368 KGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDL 427
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+Y +LV G C + A EM + G P + + T+ GL+++ +
Sbjct: 428 DSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNK 477
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 200/383 (52%), Gaps = 15/383 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K ++FD AW L+D + V +S +TF ILIRRY RAG+ A+ F
Sbjct: 157 MIDLSGKVRQFDLAW-HLIDLMKSRNVE--ISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V + F I++ +L ++ R A +F L + P V VY L+ GW
Sbjct: 214 DYGCVPD----KIAFSIVISNLSRKRRASEAQSFF---DSLKDRFEPDVIVYTNLVRGWC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + +AE+ + EM+ + PNV TY +++ CR ++ RA + +M G PNAI
Sbjct: 267 RAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI 326
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+N ++ V+AGR E+V + + L CEP +TY L++ +C+ +LE A K+L
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD--TITYNFLIEAHCRDENLENAVKVLN 384
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI + + +T+N FRY K V A +Y KM+E+ P+ +TY+IL+++
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSK 444
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTF 357
D+ +++ KEM + + +++T +L+ + C M ++ A F++M+ + L P +
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ + + ++ G ++L M
Sbjct: 505 EMVLAQLRRAGQLKKHEELVEKM 527
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 7/187 (3%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T L++ Y +AG A M G +P ++ S+ + +A + + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ + PD + Y L++ C+ ++ A +V KEMK G + ++ T +++I LCR +
Sbjct: 248 -KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV---PRSME---L 389
A F DM+ G P+ +TF L K G T ++ N M + P ++ L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 390 LDSRCKD 396
+++ C+D
Sbjct: 367 IEAHCRD 373
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 192/371 (51%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LAK +++ W D + V+ +TF I++R+YARA V+ A++TF
Sbjct: 107 VVASLAKIRQYQLMW----DVVAVMRREGAVNVETFGIIMRKYARAQKVDEAVYTFNVME 162
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+V N + F LL +LCK V+ A E F K ++ ++P + Y+ILL GW
Sbjct: 163 KYGVVPNL----AAFNSLLGALCKSKNVRKAQEIFDK---MNSRFSPDAKTYSILLEGWG 215
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N+ + EM P++VTYG +V+ C+ RV+ A+R+V++M G +P
Sbjct: 216 RAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTY 275
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ + FL E P +V Y +LV +CKA E A ++L
Sbjct: 276 IYSVLVHTYGVEMRIEDA---VATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVL 332
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M G + T+N + G+ ++A ++R+MI+ PD TY +++K+ C+
Sbjct: 333 NDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCEN 391
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
DK+++A++V K M+ + + T ++LI+ LC + +A EDMI +G+ P TF
Sbjct: 392 DKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTF 451
Query: 358 KRLNDEFKKRG 368
+L K G
Sbjct: 452 GKLRQLLLKEG 462
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 146/306 (47%), Gaps = 19/306 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG----MVEAAIWTF 56
++ L K+K A + DK+ PD T+ IL+ + RA M E
Sbjct: 176 LLGALCKSKNVRKAQ-EIFDKMNSRFSPD---AKTYSILLEGWGRAPNLPKMREVYSEML 231
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ D+V + I++DSLCK GRV+ A + PT +Y++L+
Sbjct: 232 DAGCEPDIVT--------YGIMVDSLCKTGRVEEAVRVVQDMTS--RGCQPTTYIYSVLV 281
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + ++DA +L+M K+ + P++V Y LV +C+ ++ + A R++ +M GI
Sbjct: 282 HTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGIT 341
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
N+ +N +++ L+ GR +E + R + C P TYT ++K +C+ +E A K+
Sbjct: 342 TNSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCENDKVEMALKV 400
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M + FLPS T++ +V A L MIE G P T+ L ++L K
Sbjct: 401 WKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLK 460
Query: 297 EDKLDL 302
E + D+
Sbjct: 461 EGRKDV 466
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 37/269 (13%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
R++ A TVR Y+ ++ + + + MR+E NV T+G ++ Y R
Sbjct: 90 RRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGAV-NVETFGIIMRKYARA 148
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
++VD A+ M K G+ PN +N
Sbjct: 149 QKVDEAVYTFNVMEKYGVVPNLAAFN---------------------------------- 174
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
SL+ CK+ ++ A +I M SR F P TY+ + + + +Y +M++
Sbjct: 175 -SLLGALCKSKNVRKAQEIFDKMNSR-FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLD 232
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G PD +TY I++ LCK +++ A++V ++M RGC ++L+H + ++
Sbjct: 233 AGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIED 292
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
A A F DM + G+VP + + L F K
Sbjct: 293 AVATFLDMEKDGIVPDIVVYNALVSAFCK 321
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V + L+ + +A E A F N+++ + + + I+L+ L G
Sbjct: 306 VPDIV---VYNALVSAFCKAKKFENA---FRVLNDMEG-HGITTNSRTWNIILNHLISLG 358
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A + F + + Q P Y +++ + + V+ A + W MR + P++ T
Sbjct: 359 RDDEAYKVFRRMIKCCQ---PDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHT 415
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER-- 204
+ L+ G C R V +A L+++M ++GI P + + L++ GR + + ++E+
Sbjct: 416 FSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMN 475
Query: 205 FLVCEP 210
L+ EP
Sbjct: 476 ILIQEP 481
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 207/389 (53%), Gaps = 27/389 (6%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF--- 56
M+ + K ++FD AW ++ L K G E+ + TF L+RRY RAG+ A+ F
Sbjct: 184 MLDLAGKLRQFDLAWHVIDLMKSRGVEI----TVHTFSALVRRYVRAGLAAEAVHAFNRM 239
Query: 57 -EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
++ DMV F I++ SLCK+ R A +F L + P V VY L
Sbjct: 240 EDYGCTPDMVA--------FSIVISSLCKKRRANEAQSFF---DSLKHRFEPDVVVYTSL 288
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++GW R+ ++ AE + +M+ + PNV TY +++ CR ++ RA + EM G
Sbjct: 289 VHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGC 348
Query: 176 EPNAIVYNTVIDGLVEAGRFEEV---SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+PNA+ +N+++ V+AGR E+V M+R L C P T ++Y +++ +C+ +LE
Sbjct: 349 DPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKR-LGC-PADT-ISYNFIIESHCRDENLEE 405
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A+KIL +M+ +G P+ +T+N+ F +K V A +Y +M E P+ LTY+IL++
Sbjct: 406 AAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMR 465
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLV 351
+ + D+ +++ KEM + +++T +LI + C M ++ A +M+ + L
Sbjct: 466 MFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLR 525
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P+ ++ + + +K G ++L + M
Sbjct: 526 PNLSVYETVLELLRKAGQLKKHEELVDKM 554
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 44/250 (17%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIE------------------------------ 176
Y +++ +LR+ D A ++ M+ G+E
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRME 240
Query: 177 -----PNAIVYNTVIDGLVEAGRFEEVSGMME----RFLVCEPGPTMVTYTSLVKGYCKA 227
P+ + ++ VI L + R E + RF P +V YTSLV G+C+A
Sbjct: 241 DYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRF-----EPDVVVYTSLVHGWCRA 295
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
GD+ A ++ M G P+ TY+ + G++ A +++ +MI++G P+ +T+
Sbjct: 296 GDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTF 355
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ L+++ K + + ++V +MK GC D + +I CR +EA+ M++
Sbjct: 356 NSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVK 415
Query: 348 RGLVPHYLTF 357
+G+ P+ TF
Sbjct: 416 KGVAPNASTF 425
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+R + +AG E + + L + S + +++S C+ ++ A++
Sbjct: 354 TFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTIS----YNFIIESHCRDENLEEAAKI 409
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + AP +N + + +V A R + M++ N PN +TY L+ +
Sbjct: 410 LNLM--VKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMF 467
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM-----ERFLVCE 209
R D +++ KEM + +EPN Y +I + + +M E+ L
Sbjct: 468 AESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCL--- 524
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
P + Y ++++ KAG L+ +++ M++RGF+ P
Sbjct: 525 -RPNLSVYETVLELLRKAGQLKKHEELVDKMVARGFVTRP 563
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 10/360 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ VL KA ++ A L +I G D V T+ LI + RAG + A F+ N
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTV---TYSTLISGFIRAGKILPAYELFDEMN 188
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K + A + + +L LC G+ A +F +E+ ++ P YN ++NG
Sbjct: 189 R----KGLKAHAGVHKSILRGLCDAGQCSDAVLHF---REMSKTCPPDSVTYNTMINGLS 241
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S + DA R EM PNV +Y T++ G+C+ RV+ A+ L+++M G P+ +
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVI+GL + + +E +M++ + P ++TY +LV G+C+ GDL+GA ++++ M
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG+ P+ TYN F + +E A + + MI++G PD + Y ++ CK KL
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + ++M RGC D+ + LI LC+ D A I P + + L
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL 481
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 166/309 (53%), Gaps = 5/309 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWL 133
F IL+ LC+ G + A E KE+ + P V ++N+++ G ++ + A +
Sbjct: 880 FTILIHGLCRAGDIGTAYELL---KEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFK 936
Query: 134 EMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + + P+V TY T+V+ + +VD A RLV++M +G PN + Y++++ GL +A
Sbjct: 937 EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKA 996
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+ +E + +++R P +VTY +++ G+CK G ++ A +L+ M+ G P+ TY
Sbjct: 997 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
F K GK EDA+ L M+E GY P+ TY+ LL + CK+D+++ A Q+ M
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+GC ++ + +I LC+ K E E M+ VP +TF + D K +
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176
Query: 373 AQKLCNVMS 381
A +L N++
Sbjct: 1177 AYELFNLIQ 1185
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 166/326 (50%), Gaps = 5/326 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ILI RAG + A +E + L +++ LC ++ +A E
Sbjct: 879 TFTILIHGLCRAGDIGTA---YELLKEMPR-HGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K E S P V Y+ +++ +S V DA R +M + +PNVVTY +L+ G
Sbjct: 935 F-KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++D A L++ M + G PN + YNT+IDG + GR +E ++E + P +
Sbjct: 994 CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 1053
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT L+ +CK G E A ++++M+ +G++P+ TYN F K +VE A L
Sbjct: 1054 VTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 1113
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI+ G P+ ++Y+ ++ LCK K+ + + ++M C D+ T +I +C+ Y+
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
D A F + G P+ +T+ L
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSL 1199
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 189/365 (51%), Gaps = 20/365 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--F 58
++ + K E + A LL I VP+ VS +T +I +A V + E
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT---VIAGLCKATKVHEGVLLLEQML 1150
Query: 59 ANNL--DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+NN D+V F ++D++CK RV A E F+ +E P + YN L+
Sbjct: 1151 SNNCVPDIVT--------FNTIIDAMCKTYRVDIAYELFNLIQE--SGCTPNLVTYNSLV 1200
Query: 117 NGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+G +S+ AE EM RK+ +P+++TY T+++G C+ +RVDRA +L +M +G+
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + Y+ VI L + +E + ++E L P +TY +L+ G+CK G+L+ A +
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
IL++++S+G P T++ F + SK G++ A L M+ +G PD +TY+ LLK C
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF-EDMIRRGL-VPH 353
+ A+ + + M+ GC+ D T T L+ L + + AE + M+ G + H
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNH 1440
Query: 354 YLTFK 358
L+ K
Sbjct: 1441 ELSSK 1445
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 182/377 (48%), Gaps = 14/377 (3%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K D A+ LL + + G P+ V T+ +L+ + + G E AI E V
Sbjct: 1030 KLGRIDEAYHLLEEMVDGGCQPNVV---TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 1086
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N + + LLD CK+ V+ A + + + P V YN ++ G ++ V
Sbjct: 1087 NLFT----YNSLLDMFCKKDEVERACQLLSSM--IQKGCVPNVVSYNTVIAGLCKATKVH 1140
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+ +M N P++VT+ T+++ C+ RVD A L +++ G PN + YN+++
Sbjct: 1141 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 1200
Query: 187 DGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
GL ++ RF++ + M R C P ++TY +++ G CK+ ++ A K+ M+S
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSP--DIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TY+ K+ +++A N+ M+++G+ P +TY L+ CK LD A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+++ + + +G D+ T ++ I L + + +A E M+R GLVP +T+ L
Sbjct: 1319 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 1378
Query: 364 FKKRGMTALAQKLCNVM 380
F +T A L VM
Sbjct: 1379 FCDASLTEDAVDLFEVM 1395
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 189/425 (44%), Gaps = 47/425 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L+K+ D A LL + + P+ S +T ++ + +A VE A+W E
Sbjct: 236 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNT---VLHGFCKANRVENALWLLEQM- 291
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + +++ LCK +V A K + + P V Y L++G+
Sbjct: 292 ---VTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM--IQRGCQPNVITYGTLVDGFC 346
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R ++ A +M + PN +TY ++ +CR ++RA ++++ M + G P+AI
Sbjct: 347 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAI 406
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL--VCEP---------------------------- 210
Y+T+I G +AG+ E ++E+ + C P
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS 466
Query: 211 -----GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P +V Y+ L+ CKA L A L +M+ P TYN K ++
Sbjct: 467 IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA L+ +M +G PD +TY I++ CK++ LD A ++ + MK C D+ T + L
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL 586
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SS 382
I+ LC+ D+A F++M+ G P+ +T+ L D K A ++ +M S
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646
Query: 383 VPRSM 387
P S+
Sbjct: 647 TPDSI 651
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 182/370 (49%), Gaps = 12/370 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K+ + D A L+ D + P+ V T+ L+ +AG ++ A +
Sbjct: 954 IVDSLVKSGKVDDACRLVEDMVSKGCSPNVV---TYSSLLHGLCKAGKLDEATALLQRMT 1010
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGW 119
N + + ++D CK GR+ E +H +E+ D P V Y +LL+ +
Sbjct: 1011 RSGCSPNIVT----YNTIIDGHCKLGRI---DEAYHLLEEMVDGGCQPNVVTYTVLLDAF 1063
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +DA M ++ PN+ TY +L++ +C+ V+RA +L+ M ++G PN
Sbjct: 1064 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 1123
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNTVI GL +A + E ++E+ L P +VT+ +++ CK ++ A ++ +
Sbjct: 1124 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNL 1183
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTPDRLTYHILLKILCKED 298
+ G P+ TYN K + + A L R+M + G +PD +TY+ ++ LCK
Sbjct: 1184 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D A ++ +M G D T +++I LC+ DEA+ E M++ G P +T+
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303
Query: 359 RLNDEFKKRG 368
L D F K G
Sbjct: 1304 TLIDGFCKTG 1313
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 133/257 (51%), Gaps = 2/257 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ L+D+LCK + +A E R + AP V Y+IL++ ++K + +AE +
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELL--RMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M K P+VVTY ++V+G C+ RR++ A L MR G+ P+ + Y+ VI +
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ M+ER + P +VTY++L+ G CKAG ++ A + + M+ G P+ TY
Sbjct: 559 NNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTY 618
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N K KVE A + M + TPD +TY L+ LC +L+ A +V +EMK
Sbjct: 619 NTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678
Query: 313 RGCDIDLDTSTMLIHLL 329
+GC D T L+ L
Sbjct: 679 KGCLPDRMTYGTLLRAL 695
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 172/361 (47%), Gaps = 13/361 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+IK L A++ DSA L + + G PD T+ ++ ++G V+ A E
Sbjct: 918 VIKGLCSARKLDSALELFKEMEESGSCPPDVF---TYSTIVDSLVKSGKVDDACRLVE-- 972
Query: 60 NNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
DMV K + LL LCK G++ A+ + +P + YN +++G
Sbjct: 973 ---DMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR--SGCSPNIVTYNTIIDG 1027
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +A EM PNVVTY L++ +C+ + + AI LV+ M ++G PN
Sbjct: 1028 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 1087
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN+++D + E ++ + P +V+Y +++ G CKA + +L+
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+S +P T+N K +V+ A L+ + ESG TP+ +TY+ L+ LCK
Sbjct: 1148 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207
Query: 299 KLDLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ D A + +EM + +GC D+ T +I LC+ + D A F M+ GL P +T+
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267
Query: 358 K 358
Sbjct: 1268 S 1268
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 153/311 (49%), Gaps = 9/311 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA + A LL I PD T LI +A +++A +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLST---LIDALCKAAAIDSAQELLRMSI 467
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+D + + + IL+ +LCK R+ A + + P V YN +++G
Sbjct: 468 GMDCAPDVVA----YSILIHALCKAKRLPEAESWLDVM--VKNRCYPDVVTYNSVVDGLC 521
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S+ + DA + MR V P+VVTY ++ +C+ +D A ++++ M++ P+ +
Sbjct: 522 KSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVV 581
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I+GL +AG ++ + + L C P +VTY +L+ G CK +E A+++L++M
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P TY ++E+A + R+M + G PDR+TY LL+ L K + L
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNL 701
Query: 301 DLAIQVSKEMK 311
+L Q+ KEM+
Sbjct: 702 ELVEQLLKEME 712
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 151/309 (48%), Gaps = 2/309 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ CK G+++ A + + + + P V + L++ ++ + A+
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQM--IRRGCRPDVACLSTLIDALCKAAAIDSAQELLRM 465
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ P+VV Y L+ C+ +R+ A + M K P+ + YN+V+DGL ++ R
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + +R P +VTY+ ++ +CK +L+ A K+L+ M +P TY+
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G V+ A +++++M+ G P+ +TY+ L+ LCK +K++ A ++ + M+ +
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D T T LI+ LC + +EA +M +G +P +T+ L +K L +
Sbjct: 646 CTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVE 705
Query: 375 KLCNVMSSV 383
+L M +
Sbjct: 706 QLLKEMEAT 714
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 19/300 (6%)
Query: 110 RVYNILLNGWFRSKNVKD-AERF---WLEMRKENVTPNVVT--YGTLVEGYCRLRRVDRA 163
RV + G F K V+ RF + E E T + T G +++G +R D A
Sbjct: 771 RVTAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQG---VRNGDAA 827
Query: 164 IRLVK-EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+ +EG + N ++ L+ R ++ + L C P M T+T L+
Sbjct: 828 LGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSP--NMFTFTILIH 885
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT- 281
G C+AGD+ A ++LK M G + +N + K++ A+ L+++M ESG
Sbjct: 886 GLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCP 945
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD TY ++ L K K+D A ++ ++M +GC ++ T + L+H LC+ K DEA+A
Sbjct: 946 PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRCK 395
+ M R G P+ +T+ + D K G A L M +V LLD+ CK
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 1065
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 46/281 (16%)
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV----KEMRKEGIEPNAIV 181
+ A R L+ + ++P +V G R +D LV E R +G +
Sbjct: 77 EQALRVALDEYRGQLSPEIV-------GKVLQRLIDPGAALVFFEWAETR-DGYQHEIFC 128
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM- 240
N +++ LV+A ++ + + + + G VTY++L+ G+ +AG + A ++ M
Sbjct: 129 CNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMN 188
Query: 241 -------------ISRGFL--------------------PSPTTYNYFFRYFSKFGKVED 267
I RG P TYN SK +++D
Sbjct: 189 RKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDD 248
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ L +M+++G+ P+ +Y+ +L CK ++++ A+ + ++M RGC D+ + T +I+
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LC++ + DEA + MI+RG P+ +T+ L D F + G
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 349
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 159/363 (43%), Gaps = 45/363 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFA 59
+I L K+K D A+ L L + PD V T+ I+I + W F + A
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV---TYSIVISSLCK--------WRFMDEA 1283
Query: 60 NNLD--MVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
NN+ M+KN FD GA + L+D CK G + A E L + P V ++I +
Sbjct: 1284 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL--LSKGSYPDVVTFSIFI 1341
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + ++ A M + + P+ VTY TL++G+C + A+ L + MR+ G E
Sbjct: 1342 DWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCE 1401
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLV-----------------CEPGPTMVTYTS 219
P+ Y T++ LV+ ++++ + + +V E + +
Sbjct: 1402 PDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCA 1461
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+V + K G + A K+ + M R + ++ + + E A L+R M G
Sbjct: 1462 IVDMFGKCGSPQDARKVFEGMDQRNVV----LWSAMLGVYVFHKQEEQAFGLWRVMGLEG 1517
Query: 280 YTPDRLTYHILLKILCKEDKLDLA----IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
PD +T+ LL + C LD A + +S++ G + +D + +I LL R+
Sbjct: 1518 VEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDY---GLEPGVDHFSCVIDLLGRLGLV 1574
Query: 336 DEA 338
+EA
Sbjct: 1575 NEA 1577
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 170/409 (41%), Gaps = 70/409 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ L K++ + A+ LL D++ V PD V T+ I+I + + +++A E
Sbjct: 516 VVDGLCKSRRINDAF-LLFDRMRAAGVMPDVV---TYSIVIHSFCKDNNLDSAFKMLERM 571
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
V + + + L++ LCK G V A + F + L AP + YN L++G
Sbjct: 572 KEAKCVPDVVT----YSALINGLCKAGTVDKAFDVFQEM--LGCGCAPNLVTYNTLIDGL 625
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V+ A MRK++ TP+ +TY L+ G C R++ A R+++EM+ +G P+
Sbjct: 626 CKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDR 685
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD---------- 229
+ Y T++ L + E V +++ E G L + + GD
Sbjct: 686 MTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHR-FVIRGDVLMMAMAVPM 744
Query: 230 --LEGASKILKMMISRG-FLPSPTTY-------------------NYFF----------R 257
L +++L +G F P P Y N F R
Sbjct: 745 AALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALER 804
Query: 258 YFSKF-----GKV-------EDAMNLYR-KMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+ K GKV + A+ + + GY D T + LL+ L + + A+
Sbjct: 805 FTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDAL 864
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
QV + C C ++ T T+LIH LCR A ++M R G VP
Sbjct: 865 QVYRNKLC--CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHG-VPQ 910
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 16/239 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
V V K ++ L+ +++ + E ++ L+ ++ L ++D K G
Sbjct: 1411 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCG 1470
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + F + +DQ V +++ +L + K + A W M E V P+ VT
Sbjct: 1471 SPQDARKVF---EGMDQR---NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVT 1524
Query: 147 YGTLVEGYCRLRRVDRAI-RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+ +L+ C +D A+ V R G+EP ++ VID L G E +M
Sbjct: 1525 FLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM--- 1581
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L P+ T+ L+ Y GD E A ++ ++ P+ +Y ++++ K
Sbjct: 1582 LGMPCKPSAATWNCLLSAYKICGDFERALRVAELN------PTQASYLLLSNMYAQYDK 1634
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 209/390 (53%), Gaps = 14/390 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFA 59
M+ +L +++ FD W LL++ + + ++ T ++++ R A+ V + TF +F
Sbjct: 100 MLYILGRSRMFDHVWELLIE--ARRKDQNVITPRTVMVVLGRVAKVCSVRQTVETFRKFK 157
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ D G + F LL +LC++ + A +H L ++ P ++ +NILL+GW
Sbjct: 158 KIVP-----DYGVNCFNALLRTLCQEKSMTDARNVYHS---LKHNFRPNLQTFNILLSGW 209
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
KNV+DAE F EM++ V P+VVTY +LV+ YC+ R +++A ++ EMR++ + P+
Sbjct: 210 ---KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDV 266
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y +VI GL G+ ++ +++ P + Y + ++ YC A L A +++
Sbjct: 267 ITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDE 326
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+++G P+ TTYN FFR F ++ + NLY++M+ G P + L+++ + +K
Sbjct: 327 MVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEK 386
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+++A+Q+ EM +G S +L +LC M K EA F +MI +G P ++FKR
Sbjct: 387 MEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKR 446
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ + Q L M+ R +++
Sbjct: 447 IKVLMELANKHEAIQNLTQKMAIFGRPLQV 476
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 192/381 (50%), Gaps = 16/381 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F+ W L+ D + ++K+TF ++ RRYARA V+ A+ F
Sbjct: 45 LIESLGKIKQFNVIWNLVTD----MKQKGLLNKETFALISRRYARARKVKEAVDAF---- 96
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ M K +S LLD+LCK +V+ A F K + + + ++ Y ILL GW
Sbjct: 97 -MKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNK--RGFVADIKSYTILLEGW 153
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ KN+ + EM+ E P+VVTYG L+ +C+ RR D AI L EM + +P+
Sbjct: 154 GQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSP 213
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+Y T+I+GL R E E P TY ++V YC + ++ + +
Sbjct: 214 HIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDE 273
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G PS TY+ + + GK + A ++++KM G P TY I++++ C ED+
Sbjct: 274 MRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDR 333
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D+AI+V +MK +G + + LI+ LC K DEA F++M+ G+ P F
Sbjct: 334 VDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSN 393
Query: 360 LN----DEFKKRGMTALAQKL 376
L DE KK + +KL
Sbjct: 394 LKQNLLDEGKKDTVVVFERKL 414
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 135/296 (45%), Gaps = 9/296 (3%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K F + L++SL G++K + ++ ++ Q + ++ + R++ V
Sbjct: 33 KGFQYSTESYHALIESL---GKIKQFNVIWNLVTDMKQKGLLNKETFALISRRYARARKV 89
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K+A +++M K + L++ C+ R+V+RA + +M K G + Y +
Sbjct: 90 KEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTIL 149
Query: 186 IDGLVEAGRFEEVSGMMERF-LVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
++G G+ + +S +ME + + + G P +VTY L+ +CK+ + A ++ M +
Sbjct: 150 LEGW---GQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEA 206
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ PSP Y ++ +A+ + SG+ P+ TY+ ++ C +++D
Sbjct: 207 KNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDD 266
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ EM+ G T +++H L R K A + F+ M G P T++
Sbjct: 267 VQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYE 322
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 191/366 (52%), Gaps = 10/366 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA++F A+ LL + VP +T +I+ G V++A+ +
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNT---IIKGLCDNGRVDSALVHYR--- 226
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
DM +N + IL+D+LCK R+ AS ++ AP V YN L+NG+
Sbjct: 227 --DMQRNCAPSVITYTILVDALCKSARISDASLILEDM--IEAGCAPNVVTYNTLINGFC 282
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ +A + +M + + +P+V TY L++GYC+ R +L++EM K G EPN I
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++D LV++G++ + + + L + P+ T+ ++ +CK G L+ A ++ ++M
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 402
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG LP TYN + +++DA L +M E+G PD +TY+ ++ LCK ++
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 462
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A +V + ++ G +D+ T + LI LC+ + D+A +M R G P + + L
Sbjct: 463 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 522
Query: 361 NDEFKK 366
F K
Sbjct: 523 IHGFCK 528
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++D CK G++ A E F D+ P + YNI+++G R+ + DA +
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMT--DRGCLPDIYTYNIMISGACRANRIDDARQLLER 436
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVTY ++V G C+ +VD A + + +R G + + +T+IDGL ++ R
Sbjct: 437 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 496
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ P +V YT L+ G+CKA L+ + M+ +G +P+ TY+
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 556
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K +V D L + M+E G TPD + Y ++ LCK D D A ++ K MK G
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C + T +L+ LC++ + DEA E M G +P +T+ + D F K A
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676
Query: 375 KLCNVMSS 382
+L M S
Sbjct: 677 RLFQAMKS 684
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 149/270 (55%), Gaps = 3/270 (1%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N LL+ + R K ++A + R +P+ +TY TL+ G+C+ R +A RL+ EM K
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMME-RFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
GI P+ VYNT+I GL + GR + S ++ R + P+++TYT LV CK+ +
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVD--SALVHYRDMQRNCAPSVITYTILVDALCKSARIS 253
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
AS IL+ MI G P+ TYN F K G +++A+ L+ +M+E+ +PD TY+IL+
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CK+++ ++ +EM GC+ + T L+ L + K+ +A + M+RR
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 373
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
P + TF + D F K G LA +L +M+
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 157/329 (47%), Gaps = 17/329 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +A D A LL PD V T+ ++ +A V+ A +E
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVV---TYNSIVSGLCKASQVDEAYEVYEVLR 473
Query: 61 N----LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
N LD+V L+D LCK R+ A + + + AP V Y IL+
Sbjct: 474 NGGYFLDVVT--------CSTLIDGLCKSRRLDDAEKLLREMER--NGSAPDVVAYTILI 523
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ ++ + + F+ EM + P V+TY +++ C+ RV L+K M + G+
Sbjct: 524 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT 583
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+AIVY +VIDGL ++ ++E + + PT+VTY LV CK L+ A +
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHL 643
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L++M S G LP TYN F F K + + A L++ M G +P Y +LL L
Sbjct: 644 LEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVA 703
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E+K+D A+++ +E G D+D + S L
Sbjct: 704 EEKMDQAMEIWEEALEAGADVDPEISRTL 732
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 172/367 (46%), Gaps = 11/367 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K+ A +L D I P+ V+ +T LI + + G ++ A+ F
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNT---LINGFCKLGNMDEAVVLFN--- 295
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M++N S + IL+D CKQ R + ++ + + P YN L++
Sbjct: 296 --QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM--VKYGCEPNFITYNTLMDSL 351
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S DA M + + P+ T+ +++ +C++ ++D A L + M G P+
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN +I G A R ++ ++ER P +VTY S+V G CKA ++ A ++ ++
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 471
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ + G+ T + K +++DA L R+M +G PD + Y IL+ CK D+
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD ++ EM +GC + T +++I LC+ + + + M+ RG+ P + +
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591
Query: 360 LNDEFKK 366
+ D K
Sbjct: 592 VIDGLCK 598
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 6/326 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ++I + + G ++ A F+ + + + + + I++ C+ R+ A +
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT----YNIMISGACRANRIDDARQL 433
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ E P V YN +++G ++ V +A + +R +VVT TL++G
Sbjct: 434 LERMTE--AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ RR+D A +L++EM + G P+ + Y +I G +A + ++ L PT+
Sbjct: 492 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY+ ++ CK+ + +LK M+ RG P Y K ++A LY+
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M ++G P +TY++L+ LCK +LD AI + + M+ GC D T + + +
Sbjct: 612 MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A F+ M RG P + L
Sbjct: 672 HDKAFRLFQAMKSRGCSPTPFMYSLL 697
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 9/349 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K + D A+ L +PD T+ I+I RA ++ A E
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIY---TYNIMISGACRANRIDDARQLLERMT 438
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + ++ LCK +V A E + + + + V + L++G
Sbjct: 439 EAGCPPDVVT----YNSIVSGLCKASQVDEAYEVYEVLR--NGGYFLDVVTCSTLIDGLC 492
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S+ + DAE+ EM + P+VV Y L+ G+C+ ++D+++ EM +G P I
Sbjct: 493 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 552
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ VID L ++ R + +++ L P + YTS++ G CK+ + A ++ K+M
Sbjct: 553 TYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLM 612
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ TYN K ++++A++L M G PD +TY+ + K +
Sbjct: 613 KQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEH 672
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
D A ++ + MK RGC ++L+ L K D+A +E+ + G
Sbjct: 673 DKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 156 RLRRVDRAIRLVKEMR-KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+L +D+A++ + G + + N ++ V + +E + + P
Sbjct: 108 QLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDS 167
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY++L+ G+CKA D + A ++L M RG +P YN + G+V+ A+ YR
Sbjct: 168 ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 227
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + P +TY IL+ LCK ++ A + ++M GC ++ T LI+ C++
Sbjct: 228 M-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 286
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
DEA F M+ P T+ L D + K+
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQ 319
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 198/383 (51%), Gaps = 19/383 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K K+F+ W L+ D K G ++K+TF ++ RRYAR+G V+ A+ TFE
Sbjct: 153 LIDSLGKIKQFNMIWNLVNDMKRKG-----VLTKETFALISRRYARSGKVKEAMNTFEKM 207
Query: 60 NNLDM-VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ +++ D F LLD+L K +V +A F K K + + P ++ Y ILL G
Sbjct: 208 EKFGLKIESTD-----FNRLLDTLIKSRQVLSAQNVFDKMK--IRRFVPDIKSYTILLEG 260
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W + KN+ + + EM+ E P+VVTYG L+ YC++R+ D AI L +EM + +P+
Sbjct: 261 WGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPS 320
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++ T+I+GL R E R P TY ++V YC + ++ A +++
Sbjct: 321 PHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVD 380
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKILCKE 297
M G P+ TY+ + K K +A +++ KM E P TY I++++ C
Sbjct: 381 EMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNM 440
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
DK++ AI+V MK +G + ++LI+ LC K D A F++M+ G+ P F
Sbjct: 441 DKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALF 500
Query: 358 KRLN----DEFKKRGMTALAQKL 376
L ++ +K + LAQK+
Sbjct: 501 SHLKQALIEDGRKDTVVLLAQKI 523
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 131/306 (42%), Gaps = 1/306 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++L+ L + A + F K E + + YN L++ + K +M+
Sbjct: 115 LVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMK 174
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++ V T+ + Y R +V A+ ++M K G++ + +N ++D L+++ +
Sbjct: 175 RKGVLTKE-TFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVL 233
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ ++ + P + +YT L++G+ + +L ++ + M GF P TY
Sbjct: 234 SAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILI 293
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ K K +DA+ L+R+M P + L+ L +L A++ + K G
Sbjct: 294 NAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFA 353
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T ++ C + D+A ++M + G+ P+ T+ + K T A +
Sbjct: 354 PETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSV 413
Query: 377 CNVMSS 382
MSS
Sbjct: 414 FEKMSS 419
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 184/368 (50%), Gaps = 42/368 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI +A V A+ E + + IL+D LCK+ +V AA E
Sbjct: 115 TYSVLIDGLCKANRVSQAVELLESMK----ARGCSPDVITYTILVDGLCKESKVAAAWEV 170
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R+ LD P + YN LL+G R++ V DA +M TPNVVTYGTL++G
Sbjct: 171 L--REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ RV A ++ +M +G P+ ++YN +I+GL +A + +E ++ R + P +
Sbjct: 229 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 288
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR- 273
VTY+S++ G C++ L+ A ++L + SRG P Y+ K GKV++A +LY
Sbjct: 289 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 348
Query: 274 ----------------------------------KMIESGYTPDRLTYHILLKILCKEDK 299
+M+ G P +TY+ L+K LC +
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE-FEDMIRRGLVPHYLTFK 358
LD AI++ +EM+ C T +LIH +CRM + D A+ + F++MI G++P ++T+
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS 468
Query: 359 RLNDEFKK 366
L + KK
Sbjct: 469 ILLEGLKK 476
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 178/368 (48%), Gaps = 11/368 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E D A L P V+ +T L+ R G +E A+ F+
Sbjct: 16 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT---LLDGLFRTGKLERAMALFQ--- 69
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M+ F IL+ LC+ G+++ A E+F K +D +P V Y++L++G
Sbjct: 70 --EMLDRRSHDVISFNILVTGLCRAGKIETALEFFRK---MDDRCSPNVITYSVLIDGLC 124
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V A M+ +P+V+TY LV+G C+ +V A +++EM G PN +
Sbjct: 125 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN+++ GL A R + +M P +VTY +L+ G CK G ++ A +L M
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 244
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I +G P YN K +V++++ L R+ + G PD +TY ++ LC+ ++L
Sbjct: 245 IDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 304
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ +K RGC D+ + LI LC+ K DEA +E M G +T+ L
Sbjct: 305 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTL 364
Query: 361 NDEFKKRG 368
D K G
Sbjct: 365 IDGLCKAG 372
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 163/327 (49%), Gaps = 10/327 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LLD L + G+++ A F +E+ + V +NIL+ G R+ ++ A F+ +
Sbjct: 48 YNTLLDGLFRTGKLERAMALF---QEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRK 104
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +PNV+TY L++G C+ RV +A+ L++ M+ G P+ I Y ++DGL + +
Sbjct: 105 M-DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 163
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ L P +VTY SL+ G C+A + A +++ M RG P+ TY
Sbjct: 164 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 223
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+V+DA + MI+ G TPD + Y++L+ LCK D++D +I + + G
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + +I+ LCR + DEA + RG P + + L D K G A
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343
Query: 375 KLCNVMSS------VPRSMELLDSRCK 395
L VM+ V L+D CK
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCK 370
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 137/261 (52%), Gaps = 6/261 (2%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D P V YN L++G ++ A+ + M+ +P++VTY TL++G R +++
Sbjct: 3 DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP--GPTMVTYTS 219
RA+ L +EM + I +N ++ GL AG+ E +E F + P ++TY+
Sbjct: 63 RAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETA---LEFFRKMDDRCSPNVITYSV 118
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G CKA + A ++L+ M +RG P TY K KV A + R+M+++G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ +TY+ LL LC+ ++ A+ + ++M CRGC ++ T LI LC++ + +A
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 340 AEFEDMIRRGLVPHYLTFKRL 360
A DMI +G P + + L
Sbjct: 239 AMLADMIDKGGTPDLMIYNML 259
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 154/337 (45%), Gaps = 47/337 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + +AW +L + + VP+ V T+ L+ RA V A+
Sbjct: 154 LVDGLCKESKVAAAWEVLREMLDAGCVPNLV---TYNSLLHGLCRARRVSDALALMR--- 207
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM + + L+D LCK GRVK A +D+ P + +YN+L+NG
Sbjct: 208 --DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM--IDKGGTPDLMIYNMLINGL 263
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ V ++ + P+VVTY +++ G CR R+D A RL+ ++ G P+
Sbjct: 264 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 323
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I+Y+T+IDGL +AG+ +E + E +VTY++L+ G CKAG ++ A +L
Sbjct: 324 ILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 383
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL---------------------------- 271
M+ G PS TYN + +++A+ L
Sbjct: 384 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 443
Query: 272 --------YRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++MI++G PD +TY ILL+ L K L
Sbjct: 444 VDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 119/234 (50%), Gaps = 2/234 (0%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR PNVVTY +L++G C+ DRA L + M+ P+ + YNT++DGL G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + L ++++ LV G C+AG +E A + + M R P+ TY+
Sbjct: 61 LERAMALFQEMLD-RRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSV 118
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K +V A+ L M G +PD +TY IL+ LCKE K+ A +V +EM G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C +L T L+H LCR + +A A DM RG P+ +T+ L D K G
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 232
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L ++ D A LLL PD + + LI +AG V+ A +E
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVI---LYSTLIDGLCKAGKVDEAFDLYEVMTG--- 351
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
D+ + L+D LCK GRV A + + P+ YN L+ G +
Sbjct: 352 -DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM--GTPPSTMTYNSLIKGLCDLNH 408
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA-IRLVKEMRKEGIEPNAIVYN 183
+ +A EM + N P+ VTY L+ G CR+ RVD A + +EM G+ P+ I Y+
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS 468
Query: 184 TVIDGLVEAGRFEEV 198
+++GL ++ E+
Sbjct: 469 ILLEGLKKSKDLHEL 483
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 201/383 (52%), Gaps = 15/383 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K ++FD AW L+D + V +S +TF ILIRRY RAG+ A+ F
Sbjct: 157 MIDLAGKVRQFDLAW-HLIDLMKSRNVE--ISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V + F I++ +L ++ R A +F K+ + P V VY L+ GW
Sbjct: 214 DYGCVPD----QIAFSIVISNLSRKRRASEAQSFFDSLKD---RFEPDVIVYTNLVRGWC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + +AE+ + +M+ + PNV TY +++ CR ++ RA + +M G PNAI
Sbjct: 267 RAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI 326
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+N ++ V+AGR E+V + + L CEP +TY L++ +C+ +LE A K+L
Sbjct: 327 TFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPD--TITYNFLIETHCRDENLENAVKVLN 384
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI + + +T+N FRY K V A +Y KM+E+ P+ +TY+IL+++
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSK 444
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTF 357
D+ +++ K+M + + +++T +L+ + C M ++ A F++M+ + L P +
Sbjct: 445 STDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ + + ++ G ++L M
Sbjct: 505 EMVLAQLRRAGQLKKHEELVEKM 527
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 7/187 (3%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T L++ Y +AG A M G +P ++ S+ + +A + + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ + PD + Y L++ C+ ++ A +V K+MK G + ++ T +++I LCR +
Sbjct: 248 -KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV---PRSME---L 389
A F DM+ G P+ +TF L K G ++ N M + P ++ L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 390 LDSRCKD 396
+++ C+D
Sbjct: 367 IETHCRD 373
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 191/366 (52%), Gaps = 10/366 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA++F A+ LL + VP +T +I+ G V++A+ +
Sbjct: 39 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNT---IIKGLCDNGRVDSALVHYR--- 92
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
DM ++ + IL+D+LCK R+ AS ++ AP V YN L+NG+
Sbjct: 93 --DMQRHCAPSVITYTILVDALCKSARISDASLILEDM--IEAGCAPNVVTYNTLINGFC 148
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ +A + +M + + +P+V TY L++GYC+ R +L++EM K G EPN I
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++D LV++G++ + + + L + P+ T+ ++ +CK G L+ A ++ ++M
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG LP TYN + +++DA L +M E+G PD +TY+ ++ LCK ++
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A +V + ++ G +D+ T + LI LC+ + D+A +M R G P + + L
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 388
Query: 361 NDEFKK 366
F K
Sbjct: 389 IHGFCK 394
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 148/270 (54%), Gaps = 3/270 (1%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N LL+ + R K ++A + +P+ +TY TL+ G+C+ R +A RL+ EM K
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMME-RFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
GI P+ VYNT+I GL + GR + S ++ R + P+++TYT LV CK+ +
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVD--SALVHYRDMQRHCAPSVITYTILVDALCKSARIS 119
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
AS IL+ MI G P+ TYN F K G +++A+ L+ +M+E+ +PD TY+IL+
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CK+++ ++ +EM GC+ + T L+ L + K+ +A + M+RR
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
P + TF + D F K G LA +L +M+
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 166/351 (47%), Gaps = 11/351 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K+ A +L D I P+ V+ +T LI + + G ++ A+ F
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNT---LINGFCKLGNMDEAVVLFN--- 161
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M++N S + IL+D CKQ R + ++ + + P YN L++
Sbjct: 162 --QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM--VKYGCEPNFITYNTLMDSL 217
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S DA M + + P+ T+ +++ +C++ ++D A L + M G P+
Sbjct: 218 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 277
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN +I G A R ++ ++ER P +VTY S+V G CKA ++ A ++ ++
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ + G+ T + K +++DA L R+M +G PD + Y IL+ CK D+
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 397
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
LD ++ EM +GC + T +++I LC+ + + + M+ RG+
Sbjct: 398 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 200/364 (54%), Gaps = 20/364 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
++ +L ++++FD W +L+ +S T I++ R A+ V + +F
Sbjct: 111 ILYILGRSRKFDHIWDVLIKMKRKDRF--LISPRTMQIVLARVAKLCSVRQTVESFRKFK 168
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+F + LD + F LL +LC++ + A +H+ L + + P ++ +NILL
Sbjct: 169 KFVSVLD--------TTCFNALLRTLCQEKSMTDARNVYHR---LKKEFKPNLQTFNILL 217
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+GW K ++AE F+ EMR+ + P+VV+Y +L++ YC+ R +++A ++V++MR+E I
Sbjct: 218 SGW---KQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDIS 274
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ I Y ++I GL G+ ++ ++ P + Y ++++ YC A L AS +
Sbjct: 275 PDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNL 334
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M S+G P+ TTYN FFR F + ++ +LYR+M+ESG P+ + L+++ K
Sbjct: 335 MDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRK 394
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+K+++A+ + +M +G + S +L LLC M K EA F MI +G P ++
Sbjct: 395 HEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVS 454
Query: 357 FKRL 360
F+R+
Sbjct: 455 FRRI 458
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 205/396 (51%), Gaps = 20/396 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K+L+K ++F + W L+ + E P+ + + FV+LIRR+A A MV+ A+ +
Sbjct: 140 MVKILSKMRQFGAVWGLIEEM--RKENPELIEPELFVVLIRRFASANMVKKAVEVLD--- 194
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K F+ +F LLD+LCK G VK AS+ F +E P +R + LL GW
Sbjct: 195 --EMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMRE---KIPPNLRYFTSLLYGW 249
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++M++ + P++V + L+ GY ++ A L+ +MRK G EPNA
Sbjct: 250 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNA 309
Query: 180 IVYNTVIDGLVEA-GRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
Y +I L R +E + MER+ CE +VTYT+L+ G+CK G ++
Sbjct: 310 NCYTVLIQALCRTEKRMDEAMRVFVEMERY-GCEA--DIVTYTALISGFCKWGMIDKGYS 366
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L M +G +PS TY K + E+ + L KM + G PD L Y++++++ C
Sbjct: 367 VLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLAC 426
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPH 353
++ A+++ EM+ G D ++I+ EA + F++M+ RG+ P
Sbjct: 427 NFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQ 486
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
Y T K L + + +A+ + + +S+ S EL
Sbjct: 487 YGTLKSLLNTLLRDDKLEMAKDVWSCISNKTSSCEL 522
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 7/311 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D LCK G++ A F + + P V YN L+NG ++ ++ A
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDM--IAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV-----YNTVIDGL 189
M + VTP+V+TY LV+ +C+ RVD A+ L+ M G PN +V +N +I G
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+AG FE+ S + E + P ++T+ +L+ G CKAG +E A IL +M + G P+
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN K G++E+A +M+ SG PD +TY L+ LC+ + D A+Q+ E
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
+K G D D T +L+ L + K ++A E+M+ +G P TF + G
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481
Query: 370 TALAQKLCNVM 380
A +L V+
Sbjct: 482 LAGTMELLRVV 492
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 178/357 (49%), Gaps = 14/357 (3%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+++ RAG A+ F D V + +++ LCK + A E F
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVA---PTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ E + P V YN L++ ++ ++++A R +M PNVVTY L+ G C
Sbjct: 61 EELVE--RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLC 118
Query: 156 RLRRVDRAIRLVKEMRKEGIE--PNAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPG 211
++ R+D A L++EM ++ + PN I YN+ +DGL + E +M R
Sbjct: 119 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 178
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VT+++L+ G CK G ++ A + MI+ G++P+ TYN K K+E A +
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-----DLDTSTMLI 326
M++ G TPD +TY +L+ CK ++D A+++ M RGC D T +LI
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
C+ F++ASA FE+M+ + L P +TF L D K G A+ + ++M ++
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 15/344 (4%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
GH PD V+ +T LI +AG +E A ++ V N + + +L++ LC
Sbjct: 67 GHH-PDVVTYNT---LIDSLCKAGDLEEARRLHGDMSSRGCVPNVVT----YSVLINGLC 118
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN--VT 141
K GR+ A E + P + YN L+G + +A +R + V+
Sbjct: 119 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 178
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+ VT+ TL++G C+ ++D A + +M G PN I YN +++GL +A + E M
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG-----FLPSPTTYNYFF 256
+E + P ++TY+ LV +CKA ++ A ++L M SRG +P T+N
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G E A L+ +M+ PD +T+ L+ LCK +++ A + M G
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 358
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ T L+H LC+ + +EA E+M+ G VP +T+ L
Sbjct: 359 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSL 402
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 15/350 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A + D I G VP+ + T+ L+ +A +E A E
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVI---TYNALVNGLCKADKMERAHAMIE--- 240
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFH---KRKELDQSWAPTVRVYNILL 116
MV K + +L+D+ CK RV A E H R P +NIL+
Sbjct: 241 --SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G ++ N + A + EM +N+ P+V+T+G L++G C+ +V+ A ++ M G+
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 358
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + YN ++ GL ++GR EE +E + P +TY SLV C+A + A ++
Sbjct: 359 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 418
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ + S G+ P TYN K GK E A+ + +M+ G+ PD T+ L +
Sbjct: 419 VSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHR 478
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA---EFE 343
L +++ + + +G D T + ++ +CR K D+ A EFE
Sbjct: 479 SGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 5/222 (2%)
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVK-EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
V Y +++ CR RA+ + + EM ++G+ P + YNT+I+GL ++ +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E + P +VTY +L+ CKAGDLE A ++ M SRG +P+ TY+ K
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 263 GKVEDAMNLYRKMIESG--YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
G++++A L ++M P+ +TY+ L LCK+ A ++ + ++ + D
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 321 TSTM--LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T T LI LC+ + DEA + F+DMI G VP+ +T+ L
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 222
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 19/388 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K+L+K ++F + W L+ + E P + + FV+L++R+A A MV+ AI +
Sbjct: 153 MVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIEVLD--- 207
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K F+ +F LLD+LCK G VK A++ F +++ + +R + LL GW
Sbjct: 208 --EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF---EDMRMRFPVNLRYFTSLLYGW 262
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++M + P++V Y L+ GY ++ A L+++MR+ G EPNA
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 180 IVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
Y +I L + R EE + MER+ E +VTYT+LV G+CK G ++ +
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERY---ECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI +G +PS TY + K E+ + L KM + Y PD Y++++++ CK
Sbjct: 380 LDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACK 439
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPHY 354
++ A+++ EM+ G +DT ++I+ L EAS F++M+ RGL V Y
Sbjct: 440 LGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQY 499
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T K L + K +A+ + + ++S
Sbjct: 500 GTLKLLLNTVLKDKKLEMAKDVWSCITS 527
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE----------------------------- 173
++ Y ++V+ ++R+ L++EMRKE
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 174 -------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
G EP+ V+ ++D L + G ++ + + E + P + +TSL+ G+C+
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFP-VNLRYFTSLLYGWCR 264
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A +L M GF P Y ++ GK+ DA +L R M G+ P+
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y +L++ LCK D+++ A++V EM+ C+ D+ T T L+ C+ K D+ +DMI
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 347 RRGLVPHYLTF 357
++GL+P LT+
Sbjct: 385 KKGLMPSELTY 395
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 197/360 (54%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L ++++FD W +LLD + P +S T ++++ R A+ V + +F
Sbjct: 114 MLYILGRSRKFDKIWDVLLDV--KFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFK 171
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V FD + F LL +LC++ + A +H K + + P ++ +NILL+GW
Sbjct: 172 KF--VPEFD--VTCFNALLRTLCQEKSMMDARNVYHGLKSM---FRPNLQTFNILLSGW- 223
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K+ ++AE F+ EM + V P+VV+Y LV+ YC+ R +D+A ++V +MR E I + I
Sbjct: 224 --KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVI 281
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++I GL G+ ++ +++ P + Y + ++ +C A L A +L M
Sbjct: 282 TYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEM 341
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++G P+ TTYN FFR F ++ A NLYR+M+++G P+ + L+++ K +K
Sbjct: 342 VNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKE 401
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++A+++ +M +G + S L LLC + K EA + F M+ +G P Y +FKR+
Sbjct: 402 EMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRI 461
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 39/255 (15%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V + L+ C+ + + A R V K PN +N ++ G + EE G
Sbjct: 178 DVTCFNALLRTLCQEKSMMDA-RNVYHGLKSMFRPNLQTFNILLSGWKSS---EEAEGFF 233
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCK-----------------------------------A 227
+ + P +V+Y LV YCK
Sbjct: 234 DEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLV 293
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G + A ILK M G P YN R F ++ +A +L +M+ G +P+ TY
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTY 353
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
++ +I + L A + + M GC + + L+ L + K + A + DMI+
Sbjct: 354 NLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQ 413
Query: 348 RGLVPHYLTFKRLND 362
+G + L + L D
Sbjct: 414 KGFGSYILVSEELFD 428
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 195/363 (53%), Gaps = 21/363 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K+L+K ++F + W L+ + E P + + FV+L++R+A A MV+ AI
Sbjct: 154 MVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIEV----- 206
Query: 61 NLDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD + F + +F LLD+LCK G VK A++ F +++ + +R + LL G
Sbjct: 207 -LDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLF---EDMRLRFPVNLRYFTSLLYG 262
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W R + + +A+ ++M++ P++V Y L+ GY ++ A L+K+MR+ G EPN
Sbjct: 263 WCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPN 322
Query: 179 AIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
A Y +I L + R EE + MER+ CE +VTYT+LV G+CK G ++
Sbjct: 323 ATCYTVLIQALCKVDRMEEAMKVFVEMERY-ECEA--DVVTYTALVSGFCKWGKIDKCYL 379
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L MI +G +PS TY + K K+ + + L KM + Y PD Y++++++ C
Sbjct: 380 VLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLAC 439
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPH 353
K ++ A+++ EM+ G DT ++I+ L EA F++M+ RGL VP
Sbjct: 440 KLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMVARGLFSVPQ 499
Query: 354 YLT 356
Y T
Sbjct: 500 YGT 502
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 37/261 (14%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE----------------------------- 173
++ Y ++V+ ++R+ L++EMRKE
Sbjct: 147 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 206
Query: 174 -------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
G+EP+ V+ ++D L + G ++ + + E + P + +TSL+ G+C+
Sbjct: 207 LDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFP-VNLRYFTSLLYGWCR 265
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A +L M GF P Y ++ GK+ DA +L + M G+ P+
Sbjct: 266 EEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATC 325
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y +L++ LCK D+++ A++V EM+ C+ D+ T T L+ C+ K D+ +DMI
Sbjct: 326 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMI 385
Query: 347 RRGLVPHYLTFKRLNDEFKKR 367
++GL+P LT+ + +K+
Sbjct: 386 KKGLMPSQLTYMHIMAAHEKK 406
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 197/360 (54%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L ++++FD W +LLD + P +S T ++++ R A+ V + +F
Sbjct: 114 MLYILGRSRKFDKIWDVLLDV--KFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFK 171
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V FD + F LL +LC++ + A +H K + + P ++ +NILL+GW
Sbjct: 172 KF--VPEFD--VTCFNALLRTLCQEKSMMDARNVYHGLKSM---FRPNLQTFNILLSGW- 223
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K+ ++AE F+ EM + V P+VV+Y LV+ YC+ R +D+A ++V +MR E I + I
Sbjct: 224 --KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVI 281
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++I GL G+ ++ +++ P + Y + ++ +C A L A +L M
Sbjct: 282 TYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEM 341
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++G P+ TTYN FFR F ++ A NLYR+M+++G P+ + L+++ K +K
Sbjct: 342 VNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKE 401
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++A+++ +M +G + S L LLC + K EA + F M+ +G P Y +FKR+
Sbjct: 402 EMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRI 461
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 39/255 (15%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V + L+ C+ + + A R V K PN +N ++ G + EE G
Sbjct: 178 DVTCFNALLRTLCQEKSMMDA-RNVYHGLKSMFRPNLQTFNILLSGWKSS---EEAEGFF 233
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCK-----------------------------------A 227
+ + P +V+Y LV YCK
Sbjct: 234 DEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLV 293
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G + A ILK M G P YN R F ++ +A +L +M+ G +P+ TY
Sbjct: 294 GQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTY 353
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
++ +I + L A + + M GC + + L+ L + K + A + DMI+
Sbjct: 354 NLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQ 413
Query: 348 RGLVPHYLTFKRLND 362
+G + L + L D
Sbjct: 414 KGFGSYILVSEELFD 428
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 221/404 (54%), Gaps = 24/404 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI---WTFE 57
M+ +L ++++FD W +L+D + + ++ T +++ R A+ V + W F+
Sbjct: 115 MLYILGRSRKFDHIWDVLIDI--KRKDRNLITPRTLQVVLGRVAKVCSVRMTVESFWKFK 172
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+V FD+ S F LL +LC++ + A +H L + + P ++ +NILL+
Sbjct: 173 -----RLVPVFDT--SCFNALLRTLCQEKSMSDARNVYH---HLKKGFRPNLQTFNILLS 222
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
GW K+ ++AE F+ EM++ V P++VTY +L++ +C+ R +++A +V MR+E I P
Sbjct: 223 GW---KSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILP 279
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ I Y ++I GL G+ ++ M++ P + Y ++++ YC A L+ A ++
Sbjct: 280 DVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLM 339
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M S+G P+ T+YN FFR FS + ++ + Y +M+++G P+ + L+K+ +
Sbjct: 340 AEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRH 399
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+K+++A+Q+ +M +G + S +L+ +LC M K EA F M+ +G P ++F
Sbjct: 400 EKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSF 459
Query: 358 KRLNDEF----KKRGMTALAQKLCNVMSSVPRSMELLDSR-CKD 396
+R+ K + L++K+ SS+ R+ E +D + C D
Sbjct: 460 RRIKVLMELANKHDAIRNLSEKMAIFGSSI-RAPEGMDEKECSD 502
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 194/376 (51%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L + +SKDTF +++RRYARA V+ A+ TFE +
Sbjct: 167 LIEALGKIKQFRLVWSL----VEAMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMS 222
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + S + L+D L K +VK A F + K + + P ++ Y +L+ GW
Sbjct: 223 SFGLKADL----SDYNWLIDVLSKSKQVKKAHAIFKEMKR-NGRFVPDLKTYTVLMEGWG 277
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K++ + + EM + P+VV YGTL+ +C+ + D AI++ +EM G P+
Sbjct: 278 HEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPH 337
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VY +I+GL R +E E + T ++V YC++ + A K++ M
Sbjct: 338 VYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEM 397
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ TY+ +Y K K+E+A N++++M G P TY +++ + C +++
Sbjct: 398 RKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERV 457
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A++V K+MK +G + + LI+ LC + +EA F++M+ +G+ P F L
Sbjct: 458 DMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNL 517
Query: 361 NDEFKKRGMTALAQKL 376
+ + G +LAQ +
Sbjct: 518 KEALIEGGRISLAQDM 533
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 166/378 (43%), Gaps = 49/378 (12%)
Query: 19 LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
LD +G + P+ V++ ++R + AG++ A+ F +A + + F A F L
Sbjct: 118 LDALGVNMSPELVAE-----VLRNLSNAGIL--ALAFFRWA---ERQQGFRYTAESFHNL 167
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+++L G++K + + + + + +++ + R++ VK+A + +M
Sbjct: 168 IEAL---GKIKQFRLVWSLVEAMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMSSF 224
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYNTVIDGLVEAGRFEE 197
+ ++ Y L++ + ++V +A + KEM++ G P+ Y +++G
Sbjct: 225 GLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLM 284
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY----- 252
+ + + L P +V Y +L+ +CK+G + A K+ + M + G +PSP Y
Sbjct: 285 LKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLIN 344
Query: 253 ------------------------------NYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
N + + K + A + +M ++G P
Sbjct: 345 GLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGP 404
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ TY I+L+ L K K++ A V + M GC+ L+T TM++ + C + D A +
Sbjct: 405 NARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVW 464
Query: 343 EDMIRRGLVPHYLTFKRL 360
+ M +G++P F L
Sbjct: 465 KQMKEKGVLPCMHMFSSL 482
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 65/330 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I VL+K+K+ A + + K G VPD T+ +L+ W E
Sbjct: 236 LIDVLSKSKQVKKAHAIFKEMKRNGRFVPDL---KTYTVLMEG-----------WGHE-- 279
Query: 60 NNLDMVKN-----FDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR 110
+L M+K+ D+G + L+ S CK G+ A + F R+ P+
Sbjct: 280 KDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVF--REMEANGCMPSPH 337
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKE 169
VY +L+NG + + +A +++ E+ K + P V T +V YCR + A ++V E
Sbjct: 338 VYCMLINGLGSEERLDEALKYF-ELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDE 396
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG---------------- 211
MRK GI PNA Y+ ++ L+++ + EE + +R + CEP
Sbjct: 397 MRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNER 456
Query: 212 -----------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
P M ++SL+ G C LE A + M+ +G P ++
Sbjct: 457 VDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSN 516
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
+ G++ A ++ K+ TP R
Sbjct: 517 LKEALIEGGRISLAQDMALKLDTLRKTPFR 546
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 190/376 (50%), Gaps = 30/376 (7%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I +++K +FD A L+ +D+I P TF ILI+R A + A+ F
Sbjct: 101 LIDIVSKVHQFDLASQLIVEMDQINLPPTPT-----TFFILIKRLISANLTRQAVRAF-- 153
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
N ++ + + F LLD+LCK G VK A E F++ + V++Y +L+ G
Sbjct: 154 -NEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRN---SNRFVADVKMYTVLIYG 209
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL------RRVDRAIR----LVK 168
W + K A F EM+ + V PNVVTY ++ G CR R +R IR +
Sbjct: 210 WCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFD 269
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS---GMMERFLVCEPGPTMVTYTSLVKGYC 225
EMR+ GIEP+ ++ V+ A + + V G+M+ +C P +VTYTS++K C
Sbjct: 270 EMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGIC---PNVVTYTSVIKCLC 326
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDR 284
G +E A ++ M+ G P TYN FF+ + + A+ ++KM E G P
Sbjct: 327 SCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTT 386
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
TY +L+ + K D + + ++ +M G DLD+ T+LIH LC K+ EA F +
Sbjct: 387 HTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVE 446
Query: 345 MIRRGLVPHYLTFKRL 360
MI +G +P +TF+ L
Sbjct: 447 MIEKGFLPQKVTFETL 462
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+++ YN+L++ + A + +EM + N+ P T+ L++ +A+R
Sbjct: 94 SLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAF 153
Query: 168 KEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER----FLVCEPGPTMVTYTSLVK 222
E+ + + + ++D L + G + + R F+ + YT L+
Sbjct: 154 NEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVA-----DVKMYTVLIY 208
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK----------VEDAMNLY 272
G+CK G + A L M +G P+ TYN + + DA ++
Sbjct: 209 GWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVF 268
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M ESG PD ++ I+L + + K L + MK +G ++ T T +I LC
Sbjct: 269 DEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSC 328
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ +EA ++M+R G+ P T+ E++ R
Sbjct: 329 GRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGR 363
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 17 LLLDKIGGHE----VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG- 71
L+LDK+G + P+ V T+ +I+ G +E A + +MV+N S
Sbjct: 298 LVLDKLGLMKEKGICPNVV---TYTSVIKCLCSCGRIEEAEDLID-----EMVRNGVSPC 349
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A+ + + A ++F K KE D PT Y +L+ + ++ + +
Sbjct: 350 AATYNCFFKEYRGRKDADKALKFFKKMKE-DGLCEPTTHTYGVLIAMFLKADMIGVVKEI 408
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
W +M + V P++ +Y L+ G C ++ A + EM ++G P + + T+ GL++
Sbjct: 409 WNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQ 468
Query: 192 A 192
+
Sbjct: 469 S 469
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 210 PGP--TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P P ++ +Y L+ K + AS+++ M P+PTT+ +
Sbjct: 89 PNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQ 148
Query: 268 AMNLYRKM---IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
A+ + ++ ++ T D TY LL LCK + A ++ R D+ T+
Sbjct: 149 AVRAFNEIESYTDTKLTSDHFTY--LLDTLCKYGYVKHACELFNRNSNRFV-ADVKMYTV 205
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LI+ C++ +F A + +M +G+ P+ +T+
Sbjct: 206 LIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTY 238
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 188/368 (51%), Gaps = 12/368 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LAK +++ W D + V+ +TF I++R+YARA V+ A++TF
Sbjct: 108 VVASLAKIRQYQLMW----DVVAIMRRQGVVNVETFGIIMRKYARAQKVDEAVYTFNVME 163
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+V N + F LL +LCK V+ A E F ++++ ++P + Y+ILL GW
Sbjct: 164 KYGVVPNL----AAFNSLLCALCKSKNVRKAQEIF---EQMNGRFSPDAKTYSILLEGWG 216
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N+ + + +M P++VTYG +V+ C+ RV+ A+ +V++M G +P
Sbjct: 217 RAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTF 276
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y+ ++ R E+ P +V Y +LV +CK + A +++ M
Sbjct: 277 IYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDM 336
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ T+N GK ++A ++R+MI+ PD TY +++K+ C+ D+L
Sbjct: 337 EGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDRL 395
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++A++V K M+ + + T ++LI+ LC + +A EDMI +G+ P TF +L
Sbjct: 396 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 455
Query: 361 NDEFKKRG 368
K G
Sbjct: 456 RQLLLKEG 463
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 149/290 (51%), Gaps = 20/290 (6%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS---- 73
+ +++ G PD T+ IL+ + RA + + DM+ D+G
Sbjct: 193 IFEQMNGRFSPD---AKTYSILLEGWGRAPNLPKMRKVYS-----DML---DAGCQPDIV 241
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ I++DSLCK GRV+ A F + + PT +Y++L++ + ++DA +L
Sbjct: 242 TYGIMVDSLCKTGRVEEA--VFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFL 299
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+K+ + P+VV Y LV +C++++ D A R++ +M GI PN+ +N +++ L+ G
Sbjct: 300 DMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLG 359
Query: 194 RFEEVSGMMERFLV-CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ +E + R + C+P TYT ++K +C+ LE A K+ K M + FLPS T+
Sbjct: 360 KDDEAYRVFRRMIKRCQPDSD--TYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTF 417
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ G+V A L MIE G P T+ L ++L KE + D+
Sbjct: 418 SVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDV 467
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L+ L G+ A F + + + P Y +++ + + ++ A + W
Sbjct: 348 WNIILNKLISLGKDDEAYRVFRR---MIKRCQPDSDTYTMMIKMFCENDRLEMALKVWKY 404
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P++ T+ L+ G C V +A L+++M ++GI P + + L++ GR
Sbjct: 405 MRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 464
Query: 195 FEEVSGMME--RFLVCEP 210
+ + +++ + L+ EP
Sbjct: 465 KDVLEFLVDKMKILIQEP 482
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 187/402 (46%), Gaps = 52/402 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I+ + ++ A + A V+ F S++ IL + CK GR+K A E
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAK----VRGFKPEVSVYTILTRAFCKTGRLKDALEI 217
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F +P YN +++G R + A F EM + V P+V TY L++G
Sbjct: 218 FRNIP------SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGL 271
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEP 210
C+ + D+A ++ EM G+ P+ + +N+++DGL +AG+FE M ER C P
Sbjct: 272 CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN--CRP 329
Query: 211 G---------------------------------PTMVTYTSLVKGYCKAGDLEGASKIL 237
P +VTY+ L G CK G ++ A +++
Sbjct: 330 SCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELV 389
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M +G P+ TYN K K E A L ++ SG+ PD +TY I++ LCKE
Sbjct: 390 KEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKE 449
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+LD A+++ + M RGC + T T L+ LCR + DEA F++M+ + L +
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPR---SMELLDSRCKD 396
L + + K T AQK+ + + P L+D CK+
Sbjct: 510 VSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 551
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 15/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA + + A+ LL + VPD V T+ I++ + G ++ A+ E
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVV---TYTIIVDGLCKEGRLDKALKMVE--- 460
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M+K + + + + L++ LC+ GRV A F ++ + + Y L+NG+
Sbjct: 461 --GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF--KEMVSKDCTADALAYVSLVNGY 516
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S K+A++ +R TP + Y L++GYC+ R+D + ++M G PN
Sbjct: 517 CKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 573
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN V+DGL + G+ +E +E P +V+Y ++ G KA + A ++L
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI G P TYN F K + +DA+ + + MI++G PD +TY+ L+ L + ++
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693
Query: 300 LDLAIQVSKEMKCRGCDIDLDTS-TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A ++ EM GC + T+ +I LC+ +A + M G+ + +T+
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
D K G A L + M ++
Sbjct: 754 IFIDRLCKEGRLDEASSLLSEMDTL 778
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 166/366 (45%), Gaps = 50/366 (13%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
D + L+ Y + G ++ FE V N + + I++D LCK G+V A
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKT----YNIVMDGLCKHGKVDEAFP 594
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ P V YNI+++G F++ K+A + +M + + P+ VTY TL+
Sbjct: 595 FLESMHS--AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 652
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-- 211
+C+ R D A+ ++K M K G++P+ + YNT+I GL + R + +M L G
Sbjct: 653 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML--RNGCV 710
Query: 212 -PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
TY +++ CK G L+ A ++ M G + TYN F K G++++A +
Sbjct: 711 VSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS 770
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC------------------ 312
L +M D ++Y ++ LCK ++LD A ++++EM
Sbjct: 771 LLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 827
Query: 313 ------------------RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
RGC + T M+I LC++ K D+A F++M RG+V
Sbjct: 828 TKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASS 887
Query: 355 LTFKRL 360
+++ L
Sbjct: 888 VSYTVL 893
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 136/311 (43%), Gaps = 31/311 (9%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV--------- 151
LD +AP Y++++ + + A + + P V Y L
Sbjct: 152 LDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRL 211
Query: 152 ----------------------EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
G+CR D A+ +KEM + + P+ YN +IDGL
Sbjct: 212 KDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGL 271
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+A + ++ S M+ + P VT+ S++ G CKAG E A +L +M R PS
Sbjct: 272 CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSC 331
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN K V+ A +L + + SG+ PD +TY IL LCK ++D A ++ KE
Sbjct: 332 CTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 391
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M +GC +L T LI LC+ K ++A E ++ G VP +T+ + D K G
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451
Query: 370 TALAQKLCNVM 380
A K+ M
Sbjct: 452 LDKALKMVEGM 462
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 16/344 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A+ L VPD VS + I+I +A + A + M
Sbjct: 583 LCKHGKVDEAFPFLESMHSAGCVPDVVS---YNIIIDGLFKASKPKEARQVLD-----QM 634
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
++ A + L+ CK+ R A + + P YN L++G ++
Sbjct: 635 IQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL--KNMIKAGVDPDNVTYNTLISGLSQTN 692
Query: 124 NVKDAERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ DA EM R V TY T+++ C+ + +A+ L+ M G+E N + Y
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N ID L + GR +E S ++ + V+YT+++ G CKA L+ ASK+ + M++
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 809
Query: 243 -RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+G + T+N F+K ++++A+ L M++ G +P +TY++++ LCK DK+D
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
A ++ EM RG + T+LI+ LC + EA E+M
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 4/280 (1%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ + + N L + + + M P+ TY +++ C++ ++D
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+A ++ + + G +P VY + + GR ++ + P P + Y +++
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI----PSPDAIAYNAII 233
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+C+ D +GA + LK M R P TYN K K + A + +M++ G T
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +T++ ++ LCK K + A + M R C T LI LC+ D A
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ + G VP +T+ L D KRG A +L MS
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL+ AI G + + N + L+E G + + M ER L P
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY ++K C+ ++ A +L RGF P + Y R F K G+++DA+ ++R +
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+PD + Y+ ++ C+++ D A++ KEM R D+ T +LI LC+ K
Sbjct: 222 ----PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKT 277
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
D+AS +M+ RG+ P +TF + D K G A L VM+
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 125/288 (43%), Gaps = 12/288 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ K + FD A +L + I PD V+ +T + + + R G +A E
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLG--DAYELMHEMLR 706
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +V S + + ++D LCK+G +K A YNI ++
Sbjct: 707 NGCVV----SACTTYNTIIDRLCKEGCLKQA--LLLMDHMTGHGVEANTVTYNIFIDRLC 760
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK-EGIEPNA 179
+ + +A EM + + V+Y T++ G C+ ++DRA +L +EM +G+ +
Sbjct: 761 KEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS 817
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+N +ID + R +E ++ + P+++TY ++ CK ++ A ++
Sbjct: 818 HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 877
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
M RG + S +Y G+ ++A+ + +M S D L +
Sbjct: 878 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKW 925
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 206/396 (52%), Gaps = 20/396 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L+K ++F + W L+ + + P+ + + FV+L+RR+A A MV+ A+ +
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLD--- 191
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK AS+ F +++ + + P +R + LL GW
Sbjct: 192 --EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF---EDMREKFPPNLRYFTSLLYGW 246
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++M++ + P++V + L+ GY ++ A L+ +MRK G EPN
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 180 IVYNTVIDGLVEA-GRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
Y +I L R +E + MER+ CE +VTYT+L+ G+CK G ++
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERY-GCEA--DIVTYTALISGFCKWGMIDKGYS 363
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L M +G +PS TY K + E+ + L KM G PD L Y++++++ C
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPH 353
K ++ A+++ EM+ G +DT ++I+ EA F++M+ RG+ P
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
Y T K L + + +A+ + + +S+ S EL
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCEL 519
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 186/370 (50%), Gaps = 44/370 (11%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR-VKA 90
+ F ++++ Y+R +++ A+ +L F G + +LD+ + R +
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIV----HLSQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 91 ASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A F KE+ QS +P V YNIL+ G+ + N+ A RF+ M K+ PNVVTY T
Sbjct: 189 AENVF---KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNT 245
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS---------- 199
L++GYC+LR++D L++ M +G+EPN I YN VI+GL GR +E+S
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305
Query: 200 ------------------GMMERFLVCEP-------GPTMVTYTSLVKGYCKAGDLEGAS 234
G + LV P+++TYTSL+ CKAG++ A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ L M RG P+ TY FS+ G + +A + ++MI++G++P +TY+ L+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGH 425
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C K+ AI V ++MK +G D+ + + ++ CR Y DEA M+ +G+ P
Sbjct: 426 CIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDT 485
Query: 355 LTFKRLNDEF 364
+T+ L F
Sbjct: 486 ITYSSLIQGF 495
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 169/346 (48%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILIR + AG ++ A+ F+ + N + + L+D CK ++ E
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT----YNTLIDGYCKLRKIDDGFEL 262
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P + YN+++NG R +K+ EM K + + VTY TL++GY
Sbjct: 263 L--RSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGY 320
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +A+ + EM + G+ P+ I Y ++I + +AG + +++ V P
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNE 380
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+LV G+ + G + A ++LK MI GF PS TYN GK+ DA+ +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLED 440
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M E G TPD ++Y +L C+ +D A++V ++M +G D T + LI C +
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA F++M+R GL P T+ L + + G A +L N M
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 190/404 (47%), Gaps = 27/404 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK K F A + + + P + T+ LI +AG + A EF +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVI---TYTSLIHSMCKAGNMNRAT---EFLD 369
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V+ + L+D ++G + A Y ++ +D ++P+V YN L+NG
Sbjct: 370 QMR-VRGLCPNERTYTTLVDGFSQKGYMNEA--YRVLKEMIDNGFSPSVVTYNALINGHC 426
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + DA +M+++ +TP+VV+Y T++ G+CR VD A+R+ ++M +GI+P+ I
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++I G E R +E + + L P TYT+L+ YC GDL+ A ++ M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI----------- 289
+ +G LP TY+ +K + +A L K+ P +TYH
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 290 ----LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
L+K C + + A QV + M + D ++IH CR +A + +++M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
++ G + H +T L K G +L +V+++V RS EL
Sbjct: 667 VKSGFLLHTVTVIALVKTLHKEGK---VNELNSVIANVLRSCEL 707
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 174/350 (49%), Gaps = 9/350 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ V+ +T LI Y + ++ FE ++ + K + + ++++ LC++G
Sbjct: 237 LPNVVTYNT---LIDGYCKLRKIDDG---FELLRSMAL-KGLEPNLISYNVVINGLCREG 289
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R+K S + + + ++ YN L+ G+ + N A EM + ++P+V+T
Sbjct: 290 RMKEISFVLTEMNK--RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVIT 347
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +L+ C+ ++RA + +MR G+ PN Y T++DG + G E +++ +
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI 407
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P++VTY +L+ G+C AG + A +L+ M +G P +Y+ F + V+
Sbjct: 408 DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVD 467
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A+ + RKM+ G PD +TY L++ C++ + A + EM G D T T LI
Sbjct: 468 EALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ C +A +M+ +G++P +T+ L + K+ T A++L
Sbjct: 528 NAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRL 577
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 146/293 (49%), Gaps = 3/293 (1%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK-NVKD 127
+S +S+F++++ S + + A H + + P V YN +L+ RSK N+
Sbjct: 131 NSTSSVFDLVVKSYSRLCLIDKALSIVHLSQA--HGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
AE + EM + V+PNV TY L+ G+C +D A+R M K+G PN + YNT+ID
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G + + ++ ++ + P +++Y ++ G C+ G ++ S +L M RG+
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TYN + + K G A+ ++ +M+ G +P +TY L+ +CK ++ A +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+M+ RG + T T L+ + +EA ++MI G P +T+ L
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 17/255 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C+Q R K A + F + L P Y L+N + +++ A + E
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEM--LRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNE 545
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID------- 187
M ++ V P+VVTY L+ G + R A RL+ ++ E P+ + Y+T+I+
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 188 --------GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
G G E + E L P Y ++ G+C+ GD+ A + K
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKE 665
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ GFL T + K GKV + ++ ++ S + +L++I +E
Sbjct: 666 MVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGN 725
Query: 300 LDLAIQVSKEMKCRG 314
+D+ + V EM G
Sbjct: 726 MDVVLDVLAEMAKDG 740
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 204/396 (51%), Gaps = 20/396 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L+K ++F + W L+ + + P+ + + FV+L+RR+A A MV+ A+ +
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLD--- 191
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK AS+ F +E + P +R + LL GW
Sbjct: 192 --EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE---KFPPNLRYFTSLLYGW 246
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++M++ + P++V + L+ GY ++ A L+ +MRK G EPN
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 180 IVYNTVIDGLVEA-GRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
Y +I L R +E + MER+ CE +VTYT+L+ G+CK G ++
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERY-GCEA--DIVTYTALISGFCKWGMIDKGYS 363
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L M +G +PS TY K + E+ + L KM G PD L Y++++++ C
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPH 353
K ++ A+++ EM+ G +DT ++I+ EA F++M+ RG+ P
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
Y T K L + + +A+ + + +S+ S EL
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCEL 519
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 196/360 (54%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L +++ F W LL++ + ++ T ++++ R A+ V + +F
Sbjct: 106 MLYILGRSRMFGQVWELLIEARRKDQTA--ITARTVMVVLGRIAKVCSVRQTVESFRKFR 163
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L V+ FD+ F LL +LC++ + A +H L + P ++ +NILL+GW
Sbjct: 164 KL--VQEFDTNC--FNALLRTLCQEKSMADARNVYH---SLKHRFRPNLQTFNILLSGW- 215
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K +DA+ F+ EM++ VTP+VVTY +L++ YC+ R +++A +++ EMR + P+ I
Sbjct: 216 --KTPEDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVI 273
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I GL G+ ++ +++ P Y + ++ +C A L A +++ M
Sbjct: 274 TYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEM 333
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++G P+ TTYN FFR F ++ + N+Y++M+ G P+ + L+++ + +K+
Sbjct: 334 VTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKV 393
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++A+Q +M +G S +L LLC M K +EA F +M+ +G P +++F+R+
Sbjct: 394 EMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRI 453
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 188/371 (50%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ LAK +++ W D + + ++ + F I++R+YARA VE A++TF
Sbjct: 62 MIESLAKIRQYQMVW----DLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVME 117
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M N + F LL +LCK V+ A E F K+ + P + Y+IL+ GW
Sbjct: 118 KYNMKPN----VAAFNGLLSALCKSKNVRKAQEIFDNMKD---QFVPDSKTYSILIEGWG 170
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N+ A + EM P+ VTY +V+ C+ RVD A+ +VKEM +P++
Sbjct: 171 RAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSF 230
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV---TYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ + FL E M Y +L+ +CKA ++ ++L
Sbjct: 231 IYSVLVHTYGVENRIEDA---VSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVL 287
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M +G P+ T N G+ ++A ++R+MI+ PD +Y +++K+ C
Sbjct: 288 KDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVC-EPDVDSYTMIIKMFCGR 346
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+LD+A+++ K MK + + T ++LI+ LC++ +A E+MI +G+ P TF
Sbjct: 347 KELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATF 406
Query: 358 KRLNDEFKKRG 368
RL K G
Sbjct: 407 GRLRHLLIKEG 417
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 23/308 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K+K A + D + VPD T+ ILI + RA + A +
Sbjct: 131 LLSALCKSKNVRKAQ-EIFDNMKDQFVPD---SKTYSILIEGWGRAPNLPKAREIYR--- 183
Query: 61 NLDMVKNFDSGA----SLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNIL 115
+M+ DSG + I++D LCK GRV A E KE+D + P+ +Y++L
Sbjct: 184 --EMI---DSGCIPDEVTYSIMVDVLCKAGRVDEAVEIV---KEMDYNNCKPSSFIYSVL 235
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++ + ++DA +LEM + V +V Y L+ +C+ ++ R++K+M +G+
Sbjct: 236 VHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGV 295
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
PN+ N +I+ L+ G +E + R + VCEP + +YT ++K +C +L+ A
Sbjct: 296 NPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCEPD--VDSYTMIIKMFCGRKELDMAL 353
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
KI K M + F+PS T++ + G A L +MIE G P T+ L +L
Sbjct: 354 KIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLL 413
Query: 295 CKEDKLDL 302
KE + D+
Sbjct: 414 IKEGRKDV 421
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 153/364 (42%), Gaps = 61/364 (16%)
Query: 19 LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
LD+ G P+ ++RR+ AGM+ A FE+A+ +N+ + +
Sbjct: 13 LDQTGIRISPEIAEP-----VLRRFENAGML--AYRFFEWASKQ---RNYVHSVRAYHSM 62
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL--LNGWFRSKNVKDAERFWLEMR 136
++SL K +R Y ++ L R+K + + E F + MR
Sbjct: 63 IESLAK------------------------IRQYQMVWDLVNAMRNKEILNVEAFCIIMR 98
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
K Y R ++V+ A+ M K ++PN +N ++ L ++
Sbjct: 99 K----------------YARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVR 142
Query: 197 EVS----GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ M ++F+ P TY+ L++G+ +A +L A +I + MI G +P TY
Sbjct: 143 KAQEIFDNMKDQFV-----PDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTY 197
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K G+V++A+ + ++M + P Y +L+ E++++ A+ EM+
Sbjct: 198 SIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMER 257
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
G D+ LI C+ K +DM +G+ P+ T + + RG T
Sbjct: 258 NGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDE 317
Query: 373 AQKL 376
A K+
Sbjct: 318 AFKI 321
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 189/371 (50%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ LAK +++ W D + ++ +TF I++R+YAR+ V+ A++TF
Sbjct: 83 MIESLAKIRQYQIMW----DLVNKMRSLKILNVETFCIIMRKYARSQKVKEAVYTFNIME 138
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ N + F LL +LCK V A E F+ K+ + P + Y+ILL GW
Sbjct: 139 KYDVPPNL----AAFNSLLSALCKSKNVVKAQEIFNGMKD---QFIPDSKTYSILLEGWG 191
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ N+ A + EM P++VTYG +V+ C+ RVD A+ +VKEM +P +
Sbjct: 192 KAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSF 251
Query: 181 VYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ MER E + Y +L+ +CK L+ A ++L
Sbjct: 252 IYSVLVHTYGIENRIEDAVYTFLDMERN---EIEADVAVYNALIGAFCKVNKLKNAYRVL 308
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M +G P+ T N G ++A ++R+MI+ PD TY +++K+ C+
Sbjct: 309 NEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVC-DPDADTYTMMIKMFCEN 367
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
DKL++A++V K M+ + + T ++LI+ LC+ +A E+MI +G+ P +TF
Sbjct: 368 DKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTF 427
Query: 358 KRLNDEFKKRG 368
+L K G
Sbjct: 428 GKLKQLLIKEG 438
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 14/278 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD T+ IL+ + +A + A F +DM D + I++D LCK G
Sbjct: 177 IPD---SKTYSILLEGWGKAPNLPKAREIFR--EMVDM--GCDPDIVTYGIMVDILCKAG 229
Query: 87 RVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
RV A KE+D S PT +Y++L++ + ++DA +L+M + + +V
Sbjct: 230 RVDEAVGIV---KEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVA 286
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y L+ +C++ ++ A R++ EM +GI PN+ N +++ L+ G +E + R
Sbjct: 287 VYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRM 346
Query: 206 L-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ VC+P TYT ++K +C+ LE A K+ K M + F+PS T++ K G
Sbjct: 347 IKVCDPDAD--TYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGN 404
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
A L +MIE G P +T+ L ++L KE + D+
Sbjct: 405 ASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDV 442
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 161/369 (43%), Gaps = 43/369 (11%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
+++R+ AGM+ A FE+A +N+ + +++SL K + + + +K
Sbjct: 49 VLKRFENAGML--AYQFFEWAGKQ---RNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKM 103
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
+ L V + I++ + RS+ VK+A + M K +V PN+ + +L+ C+ +
Sbjct: 104 RSLK---ILNVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSK 160
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
V +A + M+ + I P++ Y+ +++G +A + + + P +VTY
Sbjct: 161 NVVKAQEIFNGMKDQFI-PDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYG 219
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+V CKAG ++ A I+K M S P+ Y+ + ++EDA+ + M +
Sbjct: 220 IMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERN 279
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG------------------------ 314
D Y+ L+ CK +KL A +V EM C+G
Sbjct: 280 EIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEA 339
Query: 315 ----------CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
CD D DT TM+I + C K + A ++ M + VP TF L +
Sbjct: 340 FRVFRRMIKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGL 399
Query: 365 KKRGMTALA 373
K+G + A
Sbjct: 400 CKKGNASKA 408
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 135/293 (46%), Gaps = 11/293 (3%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEY-FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
+SG + I+++++ K+ Y F + +++ ++R Y+ ++ + + +
Sbjct: 36 ESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQI 95
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
+MR + NV T+ ++ Y R ++V A+ M K + PN +N+++
Sbjct: 96 MWDLVNKMRSLKIL-NVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLS 154
Query: 188 GLVEAGRF----EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
L ++ E +GM ++F+ P TY+ L++G+ KA +L A +I + M+
Sbjct: 155 ALCKSKNVVKAQEIFNGMKDQFI-----PDSKTYSILLEGWGKAPNLPKAREIFREMVDM 209
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TY K G+V++A+ + ++M S P Y +L+ E++++ A
Sbjct: 210 GCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDA 269
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ +M+ + D+ LI C++ K A +M +G+ P+ T
Sbjct: 270 VYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRT 322
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 131/288 (45%), Gaps = 12/288 (4%)
Query: 100 ELDQSWAPT-VRVYNILLNGW---FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
ELD S + + +RV I++ F + + + F ++ N T ++ Y T++E
Sbjct: 29 ELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLA 88
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS---GMMERFLVCEPGP 212
++R+ LV +MR I N + ++ + + +E +ME++ V P
Sbjct: 89 KIRQYQIMWDLVNKMRSLKI-LNVETFCIIMRKYARSQKVKEAVYTFNIMEKYDV---PP 144
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ + SL+ CK+ ++ A +I M + F+P TY+ + K + A ++
Sbjct: 145 NLAAFNSLLSALCKSKNVVKAQEIFNGMKDQ-FIPDSKTYSILLEGWGKAPNLPKAREIF 203
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M++ G PD +TY I++ ILCK ++D A+ + KEM C ++L+H
Sbjct: 204 REMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIE 263
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ ++A F DM R + + L F K A ++ N M
Sbjct: 264 NRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEM 311
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 189/380 (49%), Gaps = 17/380 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L+ D + +SKDTF ++ RRYARA V+ AI F
Sbjct: 136 LIESLGKIKQFKLIWNLVDD----MKQKKLLSKDTFALISRRYARARKVKEAITAFHKME 191
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ F +S F +LD L K V A + F K K+ + + P ++ Y ILL GW
Sbjct: 192 DY----GFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKK--KRFEPDIKSYTILLEGWG 245
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ + EM+ E P+VV YG ++ YC+ ++ D A+R EM + +P+
Sbjct: 246 QELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPH 305
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ ++I+GL + + ER TY +LV YC + +E A K + M
Sbjct: 306 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEM 365
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S+G P+ TY+ + + + ++A +Y+KM P TY I++++ C +++L
Sbjct: 366 RSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKM---SCEPTVSTYEIMVRMFCNKERL 422
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+AI++ EMK +G + + LI LC K DEA F +M+ G+ P F RL
Sbjct: 423 DMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRL 482
Query: 361 N----DEFKKRGMTALAQKL 376
DE +K + LA K+
Sbjct: 483 KQTLLDEGRKDKVADLAVKM 502
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 128/328 (39%), Gaps = 49/328 (14%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+L E +L L G V A S + K E + + T YN L+ + K K
Sbjct: 97 ALIEEVLKKLSNAG-VLALSVF--KWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLV 153
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI---------------------------- 164
+M+++ + T+ + Y R R+V AI
Sbjct: 154 DDMKQKKLLSKD-TFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKS 212
Query: 165 -------RLVKEMRKEGIEPNAIVYNTVIDGL---VEAGRFEEVSGMMERFLVCEPG--P 212
++ +M+K+ EP+ Y +++G + R EV G M+ + G P
Sbjct: 213 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMK-----DEGFEP 267
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+V Y ++ YCKA + A + M R PSP + K+ DA+ +
Sbjct: 268 DVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 327
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+ SG+ + TY+ L+ C +++ A + EM+ +G + T +++H L RM
Sbjct: 328 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRM 387
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ EA ++ M V Y R+
Sbjct: 388 QRTKEAYEVYQKMSCEPTVSTYEIMVRM 415
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 15/386 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIKVL++ ++F + W L+ + E P ++ FVIL+RR+A A MV A+
Sbjct: 136 MIKVLSRMRQFGAVWALIEEM--RQENPHLITPQVFVILMRRFASARMVHKAVQV----- 188
Query: 61 NLDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD + N+ + +F LLD+L K G VK A+ F +EL W P+V+ + LL G
Sbjct: 189 -LDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLF---EELRYRWKPSVKHFTSLLYG 244
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W + + +A+ ++M+ + P++V Y L+ GY + ++ A L+KEMR++G EPN
Sbjct: 245 WCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPN 304
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A Y +I L + R EE + + +VTY++L+ G+CK G ++ ++L
Sbjct: 305 ATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLD 364
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI +G P+ Y + K ++E+ L +M + G PD Y+ ++++ CK
Sbjct: 365 EMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLG 424
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPHYLT 356
++ +++ EM+ G +DT ++I+ EA F++M+ RGL P Y T
Sbjct: 425 EVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGT 484
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
K L + + +A+ N +++
Sbjct: 485 LKELMNSLLRAEKLEMAKDAWNCITA 510
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 188/379 (49%), Gaps = 14/379 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ LAKA+ D A L + I G PD + F LI +AG V+ A F+
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRL---MFYELILGLCQAGKVKDASERFK--- 174
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M K+ ++ +LL LC G+++ A+ F + K S +P V YN LL+
Sbjct: 175 --QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMK--SHSCSPDVVTYNTLLDAV 230
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++ V++ + + MR PNV+T+ TL+ G CR +++A+ + M + G +PN
Sbjct: 231 CKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 290
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y T+I GL A + + + E+ C P P V Y SL+ GYCK G ++ A K+ +
Sbjct: 291 YTYTTLISGLCRAEKVIQARELFEKMTQACIP-PDAVAYNSLIAGYCKRGSMDEAEKLYR 349
Query: 239 MMIS-RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M G P+ T+N F K GK+ A L +M G D TY IL+ L +
Sbjct: 350 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRA 409
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
KLD A++V K+M+ + +D + + LC+ D+A A FE + G VP+ TF
Sbjct: 410 TKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 469
Query: 358 KRLNDEFKKRGMTALAQKL 376
+ L++ K G AQKL
Sbjct: 470 RILSESLIKLGRVEDAQKL 488
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 185/384 (48%), Gaps = 12/384 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK L K + + ++ +L + + PD + F +++ +AR+ +E A ++
Sbjct: 16 IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFA---FNGVMQGFARSNNMEKAREVYQH-- 70
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV++ + + IL+ L K G++ + + + Q+ P+++ Y+ L+
Sbjct: 71 ---MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQT--PSMQAYSSLVRAL 125
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++ V A + EM + P+ + + L+ G C+ +V A K+M K G +PN
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VYN ++ GL +G+ E+ + + P +VTY +L+ CKA +E K+ +
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G++P+ T++ + G++E A+ ++ M+E+G P++ TY L+ LC+ +K
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTFK 358
+ A ++ ++M D LI C+ DEA + +M GL P +TF
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
L D F K G A +L M +
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGT 389
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 2/295 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
KN + + ++ SL K+ K Y + + P V +N ++ G+ RS N+
Sbjct: 4 KNIAANVFTYSSIIKSLVKE--AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 61
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ A + M + P+ V+Y L+ G ++ ++D +++++ EM G P+ Y+++
Sbjct: 62 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL 121
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ L +A R + S + + + P + + L+ G C+AG ++ AS+ K M G
Sbjct: 122 VRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGC 181
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P+ YN G++E A L+ +M +PD +TY+ LL +CK +++ +
Sbjct: 182 QPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCK 241
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + M+ G ++ T + LIH LCR + ++A F M+ G P+ T+ L
Sbjct: 242 LFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 296
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 128/259 (49%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D++ A V Y+ ++ + +++ + EM P+V + +++G+ R ++
Sbjct: 3 DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNME 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+A + + M + G +P+ + Y+ +I GL + G+ +E ++ ++ P+M Y+SLV
Sbjct: 63 KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
+ KA ++ AS + MI G P + + GKV+DA +++M + G
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ Y++LL LC +L+ A + EMK C D+ T L+ +C+ + +E
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242
Query: 342 FEDMIRRGLVPHYLTFKRL 360
FE M G VP+ +TF L
Sbjct: 243 FEAMRAAGYVPNVITFSTL 261
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR +N+ NV TY ++++ + + + + ++++EM G P+ +N V+ G +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ + + + P V+Y L+ G K G L+ + KIL M+ RG PS Y+
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R +K +V+ A +L+ +MI G+ PDRL ++ L+ LC+ K+ A + K+M G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
C ++ +L+H LC + ++A+ F +M P +T+ L D
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLD 228
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 187/371 (50%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LAK +++ W D + V+ +TF I++R+YARA + A++TF
Sbjct: 109 VVASLAKIRQYQLMW----DVVAIMRREGVVNVETFGIIMRKYARAQKFDEAVYTFNIME 164
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+V N + F LL +LCK V+ A E F K ++ + P + Y+ILL GW
Sbjct: 165 KYGVVPNL----AAFNSLLGALCKSKNVRKAQEIFDK---MNGRFNPDAKTYSILLEGWG 217
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ N+ + EM P++VTYG +V+ C+ RV+ A+ +V++M G +P
Sbjct: 218 KAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTF 277
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ + FL E P +V Y +LV +CK E A +++
Sbjct: 278 IYSVLVHTYGVEMRIEDA---VATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVM 334
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M G P+ T+N GK ++A ++R+MI+ PD TY +++K+ C+
Sbjct: 335 DDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCEN 393
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D +++A++V K M+ + + T ++LI+ LC + +A EDMI +G+ P TF
Sbjct: 394 DNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTF 453
Query: 358 KRLNDEFKKRG 368
+L K G
Sbjct: 454 GKLRQLLLKEG 464
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 21/307 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG----MVEAAIWTF 56
++ L K+K A + DK+ G PD T+ IL+ + +A M E
Sbjct: 178 LLGALCKSKNVRKAQ-EIFDKMNGRFNPD---AKTYSILLEGWGKAPNLPKMREVYSEML 233
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ D+V + I++DSLCK GRV+ A + PT +Y++L+
Sbjct: 234 DAGCQPDIVT--------YGIMVDSLCKTGRVEEAVLVVQDMSS--RGCQPTTFIYSVLV 283
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + ++DA +L+M K+ + P+VV Y LV +C++++ + A R++ +M GI
Sbjct: 284 HTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIA 343
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLV-CEPGPTMVTYTSLVKGYCKAGDLEGASK 235
PN+ +N +++ L+ G+ +E + R + C+P TYT ++K +C+ ++E A K
Sbjct: 344 PNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSD--TYTMMIKMFCENDNVEMALK 401
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ K M + FLPS T++ G+V A L MIE G P T+ L ++L
Sbjct: 402 VWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLL 461
Query: 296 KEDKLDL 302
KE + D+
Sbjct: 462 KEGRKDV 468
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 11/245 (4%)
Query: 128 AERFWLEMRKE---NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
A RF+ RK+ + +Y T+V ++R+ +V MR+EG+ N +
Sbjct: 84 AYRFFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGV-VNVETFGI 142
Query: 185 VIDGLVEAGRFEEVS---GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
++ A +F+E +ME++ V P + + SL+ CK+ ++ A +I M
Sbjct: 143 IMRKYARAQKFDEAVYTFNIMEKYGVV---PNLAAFNSLLGALCKSKNVRKAQEIFDKMN 199
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
R F P TY+ + K + +Y +M+++G PD +TY I++ LCK +++
Sbjct: 200 GR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVE 258
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ V ++M RGC ++L+H + ++A A F DM + G+VP + + L
Sbjct: 259 EAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALV 318
Query: 362 DEFKK 366
F K
Sbjct: 319 TAFCK 323
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L+ L G+ A F + + + P Y +++ + + NV+ A + W
Sbjct: 349 WNIILNKLISLGKDDEAYRVFRR---MIKRCQPDSDTYTMMIKMFCENDNVEMALKVWKY 405
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P++ T+ L+ G C V +A L+++M ++GI P + + L++ GR
Sbjct: 406 MRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 465
Query: 195 FEEVSGMME--RFLVCEP 210
+ + +++ + L+ EP
Sbjct: 466 KDVLEFLVDKMKILIQEP 483
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LC++G++K SE + + + + P +N L+NG+ N A E
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSK--RRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++PNVVTY TL+ C+ ++RA+ + +MR G+ PN Y T+IDG + G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ +M+ + PT++TY +L+ G+C G +E AS +L+ MI RGF+P +Y+
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + ++E A L +M+ G +PD TY L++ LCK+ +L + +EM G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T LI+ C D+A ++MI++G P +T+ L + F K+ T A+
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573
Query: 375 KL 376
+L
Sbjct: 574 RL 575
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILIR + AG +E ++ F + N + + ++D+ CK ++ A +
Sbjct: 205 TYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVT----YNTIIDAYCKLRKIGEAFKL 260
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P + YN+++NG R +K+ EM K P+ VT+ TL+ GY
Sbjct: 261 L--RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + +A+ L EM K G+ PN + Y T+I+ + +AG +++ P
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+L+ G+ + G L+ A +I+K M+ GF P+ TYN G++EDA L ++
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MIE G+ PD ++Y ++ C+ +L+ A Q+ EM +G D+ T + LI LC+ +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E F++M+ GL P +T+ L + + G
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEG 532
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 181/385 (47%), Gaps = 28/385 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I F A L + + P+ V T+ LI +AG + A+ EF
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVV---TYTTLINSMCKAGNLNRAM---EF-- 365
Query: 61 NLDMVKN--FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD +++ + L+D +QG +K A Y ++ ++ + PT+ YN L+NG
Sbjct: 366 -LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA--YQIMKEMVENGFTPTIITYNALING 422
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++DA EM + P+VV+Y T++ G+CR + +++A +L EM +GI P+
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y+++I GL + R EV + + L P VTYTSL+ YC GDL+ A ++
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI--------- 289
MI +GF P TYN F+K + ++A L K++ P+ +TY+
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602
Query: 290 ------LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
L+K C + ++ A +V + M +G ++ + ++IH ++ ++A ++
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRG 368
+M+ G PH +T L G
Sbjct: 663 EMLHSGFAPHSVTIMALAKSLYHEG 687
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 173/371 (46%), Gaps = 60/371 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI +++ G ++ A + +MV+N F + L++ C GR++ AS
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMK-----EMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ +++ + P V Y+ +++G+ R++ ++ A + +EM + ++P+V TY +L++G
Sbjct: 435 LLQEM--IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 154 YCRLRRV-----------------------------------DRAIRLVKEMRKEGIEPN 178
C+ RR+ D+A+RL EM ++G P+
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV---------------KG 223
+ YN +I+G + R +E ++ + L E P +TY +L+ KG
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKG 612
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+C G + A ++L+ M+ +G+ + YN SK G +E A NLY++M+ SG+ P
Sbjct: 613 FCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPH 672
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-DLDTSTMLIHLLCRMYKFDEASAEF 342
+T L K L E K ++ + + + C I + + +LI + + D
Sbjct: 673 SVTIMALAKSLYHEGK-EVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVL 731
Query: 343 EDMIRRGLVPH 353
+DM GL+P+
Sbjct: 732 KDMALSGLLPY 742
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 172/387 (44%), Gaps = 45/387 (11%)
Query: 29 DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-------FEILLDS 81
D + D ++ +RR+ + ++ +T + ++NL + FDS L +
Sbjct: 20 DALLADKAIVYLRRHPEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSF 79
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRV----------YNILLNGWFRSKN------- 124
CK + + Y K + QS A V V + L N +++ K+
Sbjct: 80 QCKCLALHILTRY--KLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDL 137
Query: 125 -VKDAERFWLEMRKENVT---------PNVVTYGTLVEGYCRLRR-VDRAIRLVKEMRKE 173
VK R L + ++ P V++Y +++ R ++ V A + KEM +
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ PN YN +I G AG E G MER P +VTY +++ YCK +
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCL---PNVVTYNTIIDAYCKLRKI 254
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A K+L++M +G P+ +YN + G++++ + +M + Y PDR+T++ L
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR-RG 349
+ C A+ + EM G ++ T T LI+ +C+ + A EF D +R RG
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA-MEFLDQMRDRG 373
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKL 376
L P+ T+ L D F ++G A ++
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQI 400
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 163/302 (53%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LC++G++K SE + + + + P +N L+NG+ N A E
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSK--RRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++PNVVTY TL+ C+ ++RA+ + +MR G+ PN Y T+IDG + G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ +M+ + PT++TY +L+ G+C G +E AS +L+ MI RGF+P +Y+
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + ++E A L +M+ G +PD TY L++ LCK+ +L + +EM G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T LI+ C D+A ++MI++G P +T+ L + F K+ T A+
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573
Query: 375 KL 376
+L
Sbjct: 574 RL 575
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 167/334 (50%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILIR + AG +E + F + N + + ++D+ CK ++ A +
Sbjct: 205 TYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVT----YNTIIDAYCKLRKIGEAFKL 260
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P + YN+++NG R +K+ EM K P+ VT+ TL+ GY
Sbjct: 261 L--RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + +A+ L EM K G+ PN + Y T+I+ + +AG +++ P
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+L+ G+ + G L+ A +I+K M+ GF P+ TYN G++EDA L ++
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MIE G+ PD ++Y ++ C+ +L+ A Q+ EM +G D+ T + LI LC+ +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E F++M+ GL P +T+ L + + G
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEG 532
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 181/385 (47%), Gaps = 28/385 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I F A L + + P+ V T+ LI +AG + A+ EF
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVV---TYTTLINSMCKAGNLNRAM---EF-- 365
Query: 61 NLDMVKN--FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD +++ + L+D +QG +K A Y ++ ++ + PT+ YN L+NG
Sbjct: 366 -LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA--YQIMKEMVENGFTPTIITYNALING 422
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++DA EM + P+VV+Y T++ G+CR + +++A +L EM +GI P+
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y+++I GL + R EV + + L P VTYTSL+ YC GDL+ A ++
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI--------- 289
MI +GF P TYN F+K + ++A L K++ P+ +TY+
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602
Query: 290 ------LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
L+K C + ++ A +V + M +G ++ + ++IH ++ ++A ++
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRG 368
+M+ G PH +T L G
Sbjct: 663 EMLHSGFAPHSVTIMALAKSLYHEG 687
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 173/371 (46%), Gaps = 60/371 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI +++ G ++ A + +MV+N F + L++ C GR++ AS
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMK-----EMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ +++ + P V Y+ +++G+ R++ ++ A + +EM + ++P+V TY +L++G
Sbjct: 435 LLQEM--IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 154 YCRLRRV-----------------------------------DRAIRLVKEMRKEGIEPN 178
C+ RR+ D+A+RL EM ++G P+
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV---------------KG 223
+ YN +I+G + R +E ++ + L E P +TY +L+ KG
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKG 612
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+C G + A ++L+ M+ +G+ + YN SK G +E A NLY++M+ SG+ P
Sbjct: 613 FCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPH 672
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-DLDTSTMLIHLLCRMYKFDEASAEF 342
+T L K L E K ++ + + + C I + + +LI + + D
Sbjct: 673 SVTIMALAKSLYHEGK-EVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVL 731
Query: 343 EDMIRRGLVPH 353
+DM GL+P+
Sbjct: 732 KDMALSGLLPY 742
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 172/387 (44%), Gaps = 45/387 (11%)
Query: 29 DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-------FEILLDS 81
D + D ++ +RR+ + ++ +T + ++NL + FDS L +
Sbjct: 20 DALLADKAIVYLRRHPEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSF 79
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRV----------YNILLNGWFRSKN------- 124
CK + + Y K + QS A V V + L N +++ K+
Sbjct: 80 QCKCLALHILTRY--KLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDL 137
Query: 125 -VKDAERFWLEMRKENVT---------PNVVTYGTLVEGYCRLRR-VDRAIRLVKEMRKE 173
VK R L + ++ P V++Y +++ R ++ V A + KEM +
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197
Query: 174 GIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ PN YN +I G AG E G MER P +VTY +++ YCK +
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCL---PNVVTYNTIIDAYCKLRKI 254
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A K+L++M +G P+ +YN + G++++ + +M + Y PDR+T++ L
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR-RG 349
+ C A+ + EM G ++ T T LI+ +C+ + A EF D +R RG
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA-MEFLDQMRDRG 373
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKL 376
L P+ T+ L D F ++G A ++
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQI 400
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 40/370 (10%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
+ + F ++++ Y+R +++ A+ A F G + +LD+ + R
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQ----AHGFMPGVLSYNAVLDATIRSKRNI 186
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+ +E K L+ +P V YNIL+ G+ + N+ A + +M + PNVVTY T
Sbjct: 187 SFAENVFKEM-LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF---- 205
L++GYC+LR++D +L++ M +G+EPN I YN VI+GL GR +EVS ++
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 206 ----------LV---CEPG------------------PTMVTYTSLVKGYCKAGDLEGAS 234
L+ C+ G P+++TYTSL+ CKAG++ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ L M RG P+ TY FS+ G + +A + R+M ++G++P +TY+ L+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C K++ AI V ++MK +G D+ + + ++ CR Y DEA +M+ +G+ P
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 355 LTFKRLNDEF 364
+T+ L F
Sbjct: 486 ITYSSLIQGF 495
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 168/346 (48%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILIR + AG ++ A+ F+ + N + + L+D CK ++ +
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT----YNTLIDGYCKLRKIDDGFKL 262
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P + YN+++NG R +K+ EM + + + VTY TL++GY
Sbjct: 263 L--RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +A+ + EM + G+ P+ I Y ++I + +AG +++ V P
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+LV G+ + G + A ++L+ M GF PS TYN GK+EDA+ +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M E G +PD ++Y +L C+ +D A++V +EM +G D T + LI C +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA +E+M+R GL P T+ L + + G A +L N M
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 189/404 (46%), Gaps = 27/404 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK K F A + + + P + T+ LI +AG + A+ EF +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVI---TYTSLIHSMCKAGNMNRAM---EFLD 369
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V+ + L+D ++G + A Y R+ D ++P+V YN L+NG
Sbjct: 370 QMR-VRGLCPNERTYTTLVDGFSQKGYMNEA--YRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++DA +M+++ ++P+VV+Y T++ G+CR VD A+R+ +EM ++GI+P+ I
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++I G E R +E + E L P TYT+L+ YC GDLE A ++ M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL--------- 291
+ +G LP TY+ +K + +A L K+ P +TYH L+
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 292 ------KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
K C + + A QV + M + D ++IH CR +A +++M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
++ G + H +T L K G +L +V+ V RS EL
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGK---VNELNSVIVHVLRSCEL 707
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LC++GR+K S + + ++ YN L+ G+ + N A E
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNR--RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +TP+V+TY +L+ C+ ++RA+ + +MR G+ PN Y T++DG + G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ P++VTY +L+ G+C G +E A +L+ M +G P +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + V++A+ + R+M+E G PD +TY L++ C++ + A + +EM G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T LI+ C ++A +M+ +G++P +T+ L + K+ T A+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 375 KL 376
+L
Sbjct: 576 RL 577
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 159/316 (50%), Gaps = 13/316 (4%)
Query: 71 GASLFEILLDSL----CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
G SL E+ ++L CK+G A + L P+V Y L++ ++ N+
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQA--LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A F +MR + PN TY TLV+G+ + ++ A R+++EM G P+ + YN +I
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G G+ E+ ++E P +V+Y++++ G+C++ D++ A ++ + M+ +G
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P TY+ + F + + ++A +LY +M+ G PD TY L+ C E L+ A+Q+
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL-----N 361
EM +G D+ T ++LI+ L + + EA + VP +T+ L N
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 362 DEFKKRGMTALAQKLC 377
EFK + +L + C
Sbjct: 603 IEFK--SVVSLIKGFC 616
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 18/248 (7%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR---FEEVSGMME 203
+ +V+ Y RL +D+A+ +V + G P + YN V+D + + R F E + +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE--NVFK 194
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L + P + TY L++G+C AG+++ A + M ++G LP+ TYN + K
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K++D L R M G P+ ++Y++++ LC+E ++ V EM RG +D T
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
LI C+ F +A +M+R GL P +T+ T+L +C ++
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY------------TSLIHSMCKA-GNM 361
Query: 384 PRSMELLD 391
R+ME LD
Sbjct: 362 NRAMEFLD 369
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 164/370 (44%), Gaps = 58/370 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ +++ G + A N+ F + L++ C G+++ A
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMND----NGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
KE + +P V Y+ +L+G+ RS +V +A R EM ++ + P+ +TY +L++G+
Sbjct: 438 LEDMKE--KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 155 CRLRR-----------------------------------VDRAIRLVKEMRKEGIEPNA 179
C RR +++A++L EM ++G+ P+
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY---------------TSLVKGY 224
+ Y+ +I+GL + R E ++ + E P+ VTY SL+KG+
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
C G + A ++ + M+ + P T YN + G + A LY++M++SG+
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-DLDTSTMLIHLLCRMYKFDEASAEFE 343
+T L+K L KE K++ V + R C++ + + + +L+ + R D
Sbjct: 676 VTVIALVKALHKEGKVNELNSVIVHV-LRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 344 DMIRRGLVPH 353
+M + G +P+
Sbjct: 735 EMAKDGFLPN 744
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 200/388 (51%), Gaps = 13/388 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L + +SKDTF I++RRYARA V+ A+ TFE +
Sbjct: 160 LIEALGKIKQFRLVWSL----VEAMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKMS 215
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + S + L+D L K +VK A F + K + + P ++ Y +L+ GW
Sbjct: 216 SFGLKTDL----SDYNWLIDILSKSKQVKKAHAIFKEMKRKGR-FIPDLKTYTVLMEGWG 270
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K++ + + EM + P+VV YG L+ +C+ + D AI++ EM + G P+
Sbjct: 271 HEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPH 330
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKILK 238
VY +I+GL R +E + L E G M T +++ YC+A + A K++
Sbjct: 331 VYCMLINGLGSMERLDEALKYFQ--LSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M G P+ TY+ + K K+E+A NL+++M G P+ TY +++ + C +
Sbjct: 389 EMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNE 448
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D+A++V K+MK +G + + LI+ LC + +EA F++M+ +G+ P F
Sbjct: 449 RVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFS 508
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRS 386
L + + G LAQ++ + + R+
Sbjct: 509 NLKEALVEGGRITLAQEVTQRLEMLRRT 536
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 53/324 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAG---MVEAAIWTF 56
+I +L+K+K+ A + + K G +PD T+ +L+ + M++A
Sbjct: 229 LIDILSKSKQVKKAHAIFKEMKRKGRFIPDL---KTYTVLMEGWGHEKDLLMLKAV---- 281
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ LD D A + +L+ + CK G+ A + FH+ +E P+ VY +L+
Sbjct: 282 -YQEMLDAGIKPDVVA--YGMLISAFCKSGKCDEAIKVFHEMEE--SGCMPSPHVYCMLI 336
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
NG + + +A +++ ++ KE+ P V T ++ YCR A ++V EMRK GI
Sbjct: 337 NGLGSMERLDEALKYF-QLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGI 395
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL--VCEPG---------------------- 211
PN Y+ +++ L+++ + EE + +R CEP
Sbjct: 396 GPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALK 455
Query: 212 -----------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
P M +++L+ G C LE A + M+ +G P ++
Sbjct: 456 VWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALV 515
Query: 261 KFGKVEDAMNLYRKMIESGYTPDR 284
+ G++ A + +++ TP R
Sbjct: 516 EGGRITLAQEVTQRLEMLRRTPMR 539
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+++ RAG A+ F D V + +++ LCK + A E F
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVA---PTIVTYNTIINGLCKSNELGAGMELF 239
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ E + P V YN L++ ++ ++++A R +M + PNVVTY L+ G C
Sbjct: 240 EELVE--RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLC 297
Query: 156 RLRRVDRAIRLVKEMRKEGIE--PNAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPG 211
++ R+D A L++EM ++ + PN I YN+ +DGL + E +M R
Sbjct: 298 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 357
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VT+++L+ G CK G ++ A + MI+ G++P+ TYN K K+E A +
Sbjct: 358 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 417
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M++ G TPD +TY +L+ CK ++D A+++ M RGC ++ T +I LC+
Sbjct: 418 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 477
Query: 332 MYKFDEASAEFEDM-IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ EA F+DM ++ GLVP +T+ L D + G A+ L + M
Sbjct: 478 SDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 190/399 (47%), Gaps = 53/399 (13%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQ 85
VPD K TF ILI +AG E A FE +MV KN F L+D LCK
Sbjct: 564 VPD---KVTFNILIAGACKAGNFEQASALFE-----EMVAKNLQPDVMTFGALIDGLCKA 615
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G+V+AA + L P V YN L++G +S +++A +F EM P+ +
Sbjct: 616 GQVEAARDILDLMGNL--GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 673
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TYG+LV CR R D A++LV E++ G +P+ + YN ++DGL ++G+ E+ ++E
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM---ISRGFLPSPTTYNYFFRYFSKF 262
+ P +VTY +L+ CKAGDLE A ++ M +SR +P+ TY+ K
Sbjct: 734 VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793
Query: 263 GKVEDAMNLYRKMIESG---------------------------------------YTPD 283
G++++A L ++M+ +PD
Sbjct: 794 GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPD 853
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+T+ L+ LCK + D A V +M G ++ T +L++ LC+ K + A A E
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
M+ +G+ P +T+ L D F K A +L + M+S
Sbjct: 914 SMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS 952
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 189/362 (52%), Gaps = 21/362 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD ++ T + + R RAG EA LD + + D+ A F ++ L K G
Sbjct: 498 VPDKITYCTLIDGLFRTGRAGQAEAL---------LDAMPDPDTYA--FNCCINGLSKLG 546
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A + +++ EL+ P +NIL+ G ++ N + A + EM +N+ P+V+T
Sbjct: 547 DVSRALQVYNRMLELE--LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 604
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+G L++G C+ +V+ A ++ M G+ PN + YN ++ GL ++GR EE +E +
Sbjct: 605 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 664
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +TY SLV C+A + A +++ + S G+ P TYN K G+ E
Sbjct: 665 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTE 724
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK---CRGCDIDLDTST 323
A+ + +M+ G+ PD +TY+ L+ LCK L+ A ++ +M R C ++ T +
Sbjct: 725 QAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYS 784
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRG--LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+LI+ LC++ + DEA ++M+R+ ++P+ +T+ D K+ M A A C +M
Sbjct: 785 VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA---CELMR 841
Query: 382 SV 383
S+
Sbjct: 842 SL 843
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 188/390 (48%), Gaps = 21/390 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K+ + A L + + VPD ++ + V + R +R T +
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR---------TDDALQ 693
Query: 61 NLDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ +K+F D + IL+D L K G+ + A + + + P V YN L++
Sbjct: 694 LVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM--VGKGHHPDVVTYNTLIDS 751
Query: 119 WFRSKNVKDAERFWLEMRKE---NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++ ++++A R +M PNVVTY L+ G C++ R+D A L++EM ++
Sbjct: 752 LCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSC 811
Query: 176 E--PNAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ PN I YN+ +DGL + E +M R P VT+++L+ G CK G +
Sbjct: 812 DVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD 871
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A + MI+ G++P+ TYN K K+E A + M++ G TPD +TY +L+
Sbjct: 872 EACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLV 931
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM-IRRGL 350
CK +D A+++ M RGC ++ T +I LC+ + EA F+DM ++ GL
Sbjct: 932 DAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGL 991
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P +T+ L D + G A+ L + M
Sbjct: 992 APDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 191/415 (46%), Gaps = 43/415 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A + D I G VP+ + T+ L+ +A +E A E
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVI---TYNALVNGLCKADKMERAHAMIE--- 419
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV K + +L+D+ CK RV A E H + P V +N +++G
Sbjct: 420 --SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS--RGCTPNVVTFNSIIDGL 475
Query: 120 FRSKNVKDAERFWLEMR-KENVTPNVVTYGTLVEGYCRLRR------------------- 159
+S +A + + +M K + P+ +TY TL++G R R
Sbjct: 476 CKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAF 535
Query: 160 ------------VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
V RA+++ M + + P+ + +N +I G +AG FE+ S + E +
Sbjct: 536 NCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 595
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++T+ +L+ G CKAG +E A IL +M + G P+ TYN K G++E+
Sbjct: 596 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A +M+ SG PD +TY L+ LC+ + D A+Q+ E+K G D D T +L+
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
L + + ++A E+M+ +G P +T+ L D K G A++L MSS
Sbjct: 716 GLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 140/280 (50%), Gaps = 13/280 (4%)
Query: 112 YNILLNGWFRSKNVKDA-ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
YNI+L R+ A E F EM ++ V P +VTY T++ G C+ + + L +E+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ G P+ + YNT+ID L +AG EE M R V P +VTY+ L+ G CK
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCV----PNVVTYSVLINGLCK 298
Query: 227 AGDLEGASKILKMMISRG--FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG--YTP 282
G ++ A ++++ M + LP+ TYN F K +A L R + + +P
Sbjct: 299 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 358
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +T+ L+ LCK ++D A V +M G ++ T L++ LC+ K + A A
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
E M+ +G+ P +T+ L D F K A +L + M+S
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 458
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 180/404 (44%), Gaps = 45/404 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K+ + + A +L + +G PD V+ +T LI +AG +E A
Sbjct: 713 LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNT---LIDSLCKAGDLEEARRLHG--- 766
Query: 61 NLDMVKNFD----SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
DM + +L++ LCK GR+ A E + P + YN L
Sbjct: 767 --DMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824
Query: 117 NGWFRSKNVKDAERFWLEMRKEN--VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+G + + +A +R + V+P+ VT+ TL++G C+ + D A + +M G
Sbjct: 825 DGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
PN + YN +++GL + + E M+E + P ++TY+ LV +CKA ++ A
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKI 293
++L M SRG P+ T+N K + +A ++ M ++ G PD++TY L+
Sbjct: 945 ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004
Query: 294 L-------------------------CKEDKLDLAIQVSKEMKCRGCDIDLD----TSTM 324
L C + L VS+ + R +++L T +
Sbjct: 1005 LFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALH-RMLELELVPDKVTFNI 1063
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI C+ F++ASA FE+M+ + L P +TF L D K G
Sbjct: 1064 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 123/297 (41%), Gaps = 49/297 (16%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG-YCRLRRVDRAIRL 166
T+ +N LN +S + A + PN TY TL+ Y V+R +
Sbjct: 110 TIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGF 169
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+ +R YN V+ L AG E G M R V PT+VTY +++
Sbjct: 170 FRRIRSSSRS--VADYNIVLQSLCRAGETARALEIFRGEMARDGV---APTIVTYNTIIN 224
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CK+ +L ++ + ++ RG P TYN K G +E+A L+ M P
Sbjct: 225 GLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVP 284
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI------------------------- 317
+ +TY +L+ LCK ++D A ++ +EM + CD+
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344
Query: 318 --------------DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D T + LI LC+ + DEA + F+DMI G VP+ +T+ L
Sbjct: 345 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 401
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 113/267 (42%), Gaps = 40/267 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A + D I G VP+ V T+ +L+ + +E A E
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVV---TYNVLMNGLCKTDKMERAHAMIE--- 913
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV K + +L+D+ CK V A E H + P V +N +++G
Sbjct: 914 --SMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS--RGCTPNVVTFNSIIDGL 969
Query: 120 FRSKNVKDAERFWLEMR-KENVTPNVVTYGTLVEGYCR---------------------- 156
+S +A + + +M K + P+ +TY TL++G R
Sbjct: 970 CKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAF 1029
Query: 157 ------LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
L ++ R + M + + P+ + +N +I G +AG FE+ S + E +
Sbjct: 1030 NCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 1089
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKIL 237
P ++T+ +L+ G CKAG +E I+
Sbjct: 1090 QPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 197/385 (51%), Gaps = 13/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIKVL++ ++F + W L+ + E P ++ FVIL+RR+A A MV A+ +
Sbjct: 162 MIKVLSRMRQFGAVWALIEEM--RQENPHLITPQVFVILMRRFASARMVHKAVEVLD--- 216
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK A+ F +++ W P+V+ + LL GW
Sbjct: 217 --EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF---EDMRYRWKPSVKHFTSLLYGW 271
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A+ ++M+ + P++V Y L+ GY + ++ A L+KEMR++ EPNA
Sbjct: 272 CKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNA 331
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +I L + R EE + + +VTY++L+ G+CK G ++ ++L
Sbjct: 332 TSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDE 391
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G P+ Y + K ++E+ L +M + G PD Y+ ++++ CK +
Sbjct: 392 MIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGE 451
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPHYLTF 357
+ IQ+ EM+ G +DT ++I+ EA F++M+ RGL P Y T
Sbjct: 452 VKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTL 511
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
K L + + +A+ N +++
Sbjct: 512 KELMNSLLRAEKLEMAKDAWNCITA 536
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 191/376 (50%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L + +SKDTF +++RRYARA V+ A+ TFE
Sbjct: 185 LIEALGKIKQFRLVWSL----VEAMRCRGLLSKDTFRLIVRRYARARKVKEAVETFEKMA 240
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + S + L+D L K +VK A F + K + + P ++ Y +L+ GW
Sbjct: 241 GFGLKADL----SDYNWLIDVLSKSKQVKKAHAIFKEMKR-NGRFVPDLKTYTVLMEGWG 295
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K++ + + EM + P+VV YG L+ +C+ + D AI++ +EM G P+
Sbjct: 296 HEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPH 355
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VY +I+GL R +E E + T ++V YC++ + A K++ M
Sbjct: 356 VYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEM 415
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ TY+ + K K+E+A N+++ M + G P TY +++ + C +++
Sbjct: 416 RKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERV 475
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A++V +MK +G + + LI+ LC + +EA A F++M+ RG+ P F L
Sbjct: 476 DVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNL 535
Query: 361 NDEFKKRGMTALAQKL 376
+ + G +LAQ++
Sbjct: 536 KEALIEGGRISLAQEM 551
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 34/320 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I VL+K+K+ A + + K G VPD T+ +L+ W E
Sbjct: 254 LIDVLSKSKQVKKAHAIFKEMKRNGRFVPDL---KTYTVLMEG-----------WGHE-- 297
Query: 60 NNLDMVKN-----FDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR 110
+L M+K+ D+G + +L+ S CK G+ A + F R+ P+
Sbjct: 298 KDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVF--REMETNGCMPSPH 355
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKE 169
VY +L+NG + + +A +++ E+ K + P V T +V YCR + A ++V E
Sbjct: 356 VYCMLINGLGSEERLDEALKYF-ELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDE 414
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPGPTMVTYTSLVKGYCKA 227
MRK GI PN+ Y+ ++ L+++ + EE + + CEP + TYT +V +C
Sbjct: 415 MRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEP--QLNTYTMMVGMFCSN 472
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
++ A K+ M +G LP ++ ++E+A +++M++ G P +
Sbjct: 473 ERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLF 532
Query: 288 HILLKILCKEDKLDLAIQVS 307
L + L + ++ LA +++
Sbjct: 533 SNLKEALIEGGRISLAQEMA 552
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 200/388 (51%), Gaps = 13/388 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L + +SKDTF I++RRYARA V+ A+ TFE +
Sbjct: 160 LIEALGKIKQFRLVWSL----VEAMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKMS 215
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + S + L+D L K +VK A F + K + + P ++ Y +L+ GW
Sbjct: 216 SFGLKTDL----SDYNWLIDILSKSKQVKKAHAIFKEMKRKGR-FIPDLKTYTVLMEGWG 270
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K++ + + EM + P+VV YG L+ +C+ + D AI++ EM + G P+
Sbjct: 271 HEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPH 330
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKILK 238
VY +I+GL R +E + L E G M T +++ YC+A + A K++
Sbjct: 331 VYCMLINGLGSMERLDEALKYFQ--LSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M G P+ TY+ + K K+E+A NL+++M G P+ TY +++ + C +
Sbjct: 389 EMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNE 448
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D+A++V K+MK +G + + LI+ LC + +EA F++M+ +G+ P F
Sbjct: 449 RVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFS 508
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRS 386
L + + G LAQ++ + + R+
Sbjct: 509 NLKEALVEGGRITLAQEVTQRLEMLRRT 536
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 53/324 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAG---MVEAAIWTF 56
+I +L+K+K+ A + + K G +PD T+ +L+ + M++A
Sbjct: 229 LIDILSKSKQVKKAHAIFKEMKRKGRFIPDL---KTYTVLMEGWGHEKDLLMLKAV---- 281
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ LD D A + +L+ + CK G+ A + FH+ +E P+ VY +L+
Sbjct: 282 -YQEMLDAGIKPDVVA--YGMLISAFCKSGKCDEAIKVFHEMEE--SGCMPSPHVYCMLI 336
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
NG + + +A +++ ++ KE+ P V T ++ YCR A ++V EMRK GI
Sbjct: 337 NGLGSMERLDEALKYF-QLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGI 395
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL--VCEPG---------------------- 211
PN Y+ +++ L+++ + EE + +R CEP
Sbjct: 396 GPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALK 455
Query: 212 -----------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
P M +++L+ G C LE A + M+ +G P ++
Sbjct: 456 VWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALV 515
Query: 261 KFGKVEDAMNLYRKMIESGYTPDR 284
+ G++ A + +++ TP R
Sbjct: 516 EGGRITLAQEVTQRLEMLRRTPMR 539
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 184/361 (50%), Gaps = 13/361 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +A A + D A L +G P+ V T+ LI +ARA +E A+ E
Sbjct: 31 IITAMANAGDLDGAM-DHLRSMGCD--PNVV---TYTALIAAFARAKKLEEAMKLLEEMR 84
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + +L+D+LCK V AA + +K ++ +AP V +N L++G+
Sbjct: 85 ERGCPPNLVT----YNVLVDALCKLSMVGAAQDVV--KKMIEGGFAPNVMTFNSLVDGFC 138
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ NV DA + M + + PNVVTY L++G C+ ++ A +++EM+ G+ P+A
Sbjct: 139 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAF 198
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I GL +A + EE M+ R P +V Y+S++ +CK+G L A K L+ M
Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 258
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-YTPDRLTYHILLKILCKEDK 299
+ P TYN K GK+ +A + +M ESG PD +TY ++ LCK D
Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A ++ M GC+ D+ T T +I LC+ + +EA + M R G P+ +T+
Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 378
Query: 360 L 360
L
Sbjct: 379 L 379
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 150/299 (50%), Gaps = 5/299 (1%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C G + AA E + K +AP + ++ N D + +R P
Sbjct: 1 CNAGDLHAALELLEEMKS--AGFAPDAFTHTPIITAM---ANAGDLDGAMDHLRSMGCDP 55
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
NVVTY L+ + R ++++ A++L++EMR+ G PN + YN ++D L + ++
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++ + P ++T+ SLV G+CK G+++ A K+L +M+++G P+ TY+ K
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
K +A + +M SG TPD TY L+ LCK DK++ A Q+ + M GC D+
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ +IH C+ K EA ++M ++ P +T+ + D K G A AQ + + M
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 142/275 (51%), Gaps = 1/275 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V Y L+ + R+K +++A + EMR+ PN+VTY LV+ C+L V A +
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
VK+M + G PN + +N+++DG + G ++ ++ + P +VTY++L+ G CK
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A ++L+ M + G P TY+ K K+E+A + R+M SG TPD +
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ CK KL A + +EM+ + D+ T +I LC++ K EA + M
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294
Query: 347 RRG-LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
G ++P +T+ + + K M AQKL + M
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 144/275 (52%), Gaps = 7/275 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK +++ A + R+ P V VY+ +++ + +S + +A++ E
Sbjct: 200 YSALIHGLCKADKIEEAEQML--RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 257
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYNTVIDGLVEAG 193
MRK+ +P+VVTY T+++G C+L ++ A ++ +M++ G + P+ + Y+TVI+GL ++
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E +++R P +VTYT+++ G CK G LE A +L+ M G P+ TY
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K KV++A + +M +G P+ +TY+ ++ LC ++ A Q+ + MK
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK-D 436
Query: 314 G---CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
G C D T +++ L EA E M
Sbjct: 437 GRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 130/240 (54%), Gaps = 5/240 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++ + CK G++ A + + ++ Q +P V YN +++G + + +A+
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRK--QRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291
Query: 134 EMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M++ +V P+VVTY T++ G C+ + A +L+ M K G P+ + Y T+IDGL +
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR EE +++ P +VTYT+L+ G CKA ++ A ++++ M + G P+ TY
Sbjct: 352 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 411
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIE--SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
N G++++A L ++M + + +PD TY ++ L D + A Q+ ++M
Sbjct: 412 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 190/371 (51%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ LAK +++ W D + ++ +TF I++R+YARA V+ A++TF +
Sbjct: 84 MIESLAKIRQYQIVW----DLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMD 139
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+V N + F LL +LCK V+ A E F K + P + Y+ILL GW
Sbjct: 140 KYDVVPNL----AAFNGLLSALCKSNNVRKAQEIFDAMK---GQFVPDEKSYSILLEGWG 192
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ N+ A + EM + P+VVTYG +V+ C+ RVD A+ +VKEM P +
Sbjct: 193 KAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSF 252
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL-VCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ ++ FL + + G +V Y +L+ +CK + ++L
Sbjct: 253 IYSVLVHTYGVEHRIEDA---IDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVL 309
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M S G P+ T N G+ + A ++ +MI+ PD TY +++K+ C++
Sbjct: 310 KEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKLC-EPDADTYTMMIKMFCEK 368
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++L++A+++ K MK + + T + LI LC +A E+MI +G+ P +TF
Sbjct: 369 NELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITF 428
Query: 358 KRLNDEFKKRG 368
RL K G
Sbjct: 429 GRLRQLLIKEG 439
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 149/288 (51%), Gaps = 16/288 (5%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFE 76
+ D + G VPD + ++ IL+ + +A + A F +MV+ D +
Sbjct: 169 IFDAMKGQFVPD---EKSYSILLEGWGKAPNLPRAREVFR-----EMVEAGCDPDVVTYG 220
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
I++D LCK GRV A E KE+D + PT +Y++L++ + ++DA +LEM
Sbjct: 221 IMVDVLCKAGRVDEAVEVV---KEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEM 277
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K+ + +VV Y L+ +C++ + R++KEM G+ PN+ N +I ++ G+
Sbjct: 278 AKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQT 337
Query: 196 EEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + R + +CEP TYT ++K +C+ +LE A KI K M S+ F+PS T++
Sbjct: 338 DRAFRVFCRMIKLCEPDAD--TYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSA 395
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ + A + +MIE G P R+T+ L ++L KE + D+
Sbjct: 396 LIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDV 443
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 25 HEVPDFVSKDTFVILIRRYARAGMV--EAAIWTF----EFANNLDMVKNFDSG-----AS 73
H + D + DTF+ + ++ +A +V A I F +F N ++K +S +
Sbjct: 265 HRIEDAI--DTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSR 322
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ S+ QG+ A F + +L + P Y +++ + ++ A + W
Sbjct: 323 TCNVIISSMIGQGQTDRAFRVFCRMIKLCE---PDADTYTMMIKMFCEKNELEMALKIWK 379
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M+ + P++ T+ L++G C +A +++EM ++GI P+ I + + L++ G
Sbjct: 380 YMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEG 439
Query: 194 RFEEVSGMMER--FLVCEP 210
R + + + E+ LV EP
Sbjct: 440 REDVLKFLHEKMNLLVKEP 458
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 193/390 (49%), Gaps = 21/390 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I LAK +++ W D + + V+ +TF I++R+YARA VE A++TF +
Sbjct: 62 VIDSLAKIRQYQLMW----DVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMD 117
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ N + F LL +LCK V+ A E F K+ + P + Y+ILL GW
Sbjct: 118 KYDVPPNL----AAFNGLLSALCKSKNVRKAQEIFDSIKD---RFVPDSKTYSILLEGWG 170
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ A + EM P++VTYG +V+ C+ RVD A+ +V EM +P
Sbjct: 171 KDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPF 230
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ + FL E P + Y +L+ +CKA L+ ++L
Sbjct: 231 IYSVLVHTYGIENRIEDA---VSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVL 287
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M +G P+ T+N G+ ++A ++ +MI+ PD TY +++K+ C+
Sbjct: 288 NEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVC-EPDADTYTMMIKMFCER 346
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D+L A++V K MK + + T +LI+ LC +A E+MI +G+ P +TF
Sbjct: 347 DELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTF 406
Query: 358 KRLNDEFKKRG---MTALAQKLCNVMSSVP 384
RL K G + QK NV+ + P
Sbjct: 407 GRLRQLLIKEGREDVLKFLQKKINVLVNDP 436
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 140/314 (44%), Gaps = 15/314 (4%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEY-FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
SG + E +++ + K+ Y F + E + + +V+ ++ +++ + ++
Sbjct: 16 SGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAK---IRQY 72
Query: 129 ERFW--LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+ W +++ K NV T+ ++ Y R ++V+ A+ M K + PN +N ++
Sbjct: 73 QLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLL 132
Query: 187 DGLVEAGRF----EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
L ++ E + +RF+ P TY+ L++G+ K +L A +I + M+S
Sbjct: 133 SALCKSKNVRKAQEIFDSIKDRFV-----PDSKTYSILLEGWGKDPNLPKAREIFREMVS 187
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G P TY K G+V++A+ + +M + P Y +L+ E++++
Sbjct: 188 NGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIED 247
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A+ EM+ G + D+ LI C+ + +M +G+ P+ TF +
Sbjct: 248 AVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILS 307
Query: 363 EFKKRGMTALAQKL 376
RG T A ++
Sbjct: 308 SLIGRGETDEAYRV 321
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 17/257 (6%)
Query: 128 AERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A RF W E ++ + +V + T+++ ++R+ +VK M+ + + N + +
Sbjct: 39 AYRFFEWAE-KQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRM-VNVETFCII 96
Query: 186 IDGLVEAGRFEEVS---GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+ A + EE +M+++ V P + + L+ CK+ ++ A +I +
Sbjct: 97 MRKYARAQKVEEAVYTFNIMDKYDV---PPNLAAFNGLLSALCKSKNVRKAQEIFDSIKD 153
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
R F+P TY+ + K + A ++R+M+ +G PD +TY I++ +LCK ++D
Sbjct: 154 R-FVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDE 212
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A+ + EM C ++L+H + ++A + F +M G+ P + L
Sbjct: 213 ALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIG 272
Query: 363 EFKKRGMTALAQKLCNV 379
F K A +L NV
Sbjct: 273 AFCK------ANRLKNV 283
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 186/371 (50%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LAK +++ W D + + +TF I++R+YARA + A++TF
Sbjct: 110 VVASLAKIRQYQLMW----DVVAVMRKEGVANVETFSIIMRKYARAQKFDEAVYTFNIME 165
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N + F LL +LCK V+ A E F K ++ ++P + Y+ILL GW
Sbjct: 166 RYGVAHNL----AAFNSLLGALCKSKNVRKAQEIFDK---MNNRFSPDAKTYSILLEGWG 218
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N+ + +M P++VTYG +V+ C+ RV+ A+ +V++M G +P
Sbjct: 219 RAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTF 278
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ + FL E P +V Y +LV +CK + A +++
Sbjct: 279 IYSVLVHTYGVDMRIEDA---VATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVM 335
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M G P+ T+N GK ++A ++R MI+ PD TY +++K+ C+
Sbjct: 336 DDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPDSDTYTMMIKMFCEN 394
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
DK+++A++V K M+ + + T ++LI+ LC + +A EDMI +G+ P TF
Sbjct: 395 DKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTF 454
Query: 358 KRLNDEFKKRG 368
+L K G
Sbjct: 455 GKLRQLLLKEG 465
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 127/237 (53%), Gaps = 3/237 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D+LCK GRV+ A + PT +Y++L++ + ++DA +L+
Sbjct: 245 YGIMVDALCKTGRVEEAVCVVQDMSS--RGCQPTTFIYSVLVHTYGVDMRIEDAVATFLD 302
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+ + P+VV Y LV +C++++ D A R++ +M GI PN+ +N +++ L+ G+
Sbjct: 303 MEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGK 362
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + R ++ P TYT ++K +C+ +E A K+ K M + FLPS T++
Sbjct: 363 DDEAYRVF-RNMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSV 421
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
G+V A L MIE G P T+ L ++L KE + D+ + ++MK
Sbjct: 422 LINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMK 478
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 11/245 (4%)
Query: 128 AERF--WLEMRKENVTPNVV-TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
A RF W +K + V +Y T+V ++R+ +V MRKEG+ N ++
Sbjct: 85 AYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGV-ANVETFSI 143
Query: 185 VIDGLVEAGRFEEVS---GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
++ A +F+E +MER+ V + + SL+ CK+ ++ A +I M
Sbjct: 144 IMRKYARAQKFDEAVYTFNIMERYGVAH---NLAAFNSLLGALCKSKNVRKAQEIFDKMN 200
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+R F P TY+ + + + +Y M+ +G PD +TY I++ LCK +++
Sbjct: 201 NR-FSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVE 259
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ V ++M RGC ++L+H + ++A A F DM + G+VP + + L
Sbjct: 260 EAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALV 319
Query: 362 DEFKK 366
F K
Sbjct: 320 TAFCK 324
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ K K+FD+A+ ++D + GH + + T+ I++ G + A F
Sbjct: 318 LVTAFCKVKKFDNAF-RVMDDMEGHGISP--NSRTWNIILNTLISLGKDDEAYRVFR--- 371
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M+K + + +++ C+ +++ A + + K L Q + P++ +++L+NG
Sbjct: 372 --NMIKRCKPDSDTYTMMIKMFCENDKIEMALKVW-KYMRLKQ-FLPSMHTFSVLINGLC 427
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
V A +M ++ + P T+G L + + R D LV++M+ EP
Sbjct: 428 DKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKMLIQEP 484
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 196/391 (50%), Gaps = 23/391 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ LAK +++ W D I + ++ +TF I++R+YARA +E A++TF
Sbjct: 62 MIESLAKIRQYQIMW----DLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVME 117
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ N + F L +LCK V+ A E F K+ + P + Y ILL GW
Sbjct: 118 KYDVPPNL----AAFNGLFSALCKSKNVRKAQEIFDSSKD---RFVPDSKTYTILLEGWG 170
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ N+ A + EM +P++VTYG +V+ C+ RVD A+ +VKEM +P +
Sbjct: 171 KTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSF 230
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ +I R E+ ++ FL E + Y +L+ +CK + ++L
Sbjct: 231 IYSVLIHTYGIENRIEDA---VDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVL 287
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M +G P+ T N G+ ++A ++R+MI+ PD TY +++K+ C+
Sbjct: 288 NEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKVC-EPDADTYTMMIKMFCER 346
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++L++A++V K MK + + T ++LI+ LC A EDMI +G+ P +TF
Sbjct: 347 NELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTF 406
Query: 358 KRLNDEFKKRG----MTALAQKLCNVMSSVP 384
RL K G + L QK+ NV+ P
Sbjct: 407 GRLRHLLIKEGREDVLEFLQQKI-NVLIKEP 436
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 129/301 (42%), Gaps = 14/301 (4%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW--L 133
EI+ D L + + F + E + +VR Y+ ++ + ++ + W +
Sbjct: 23 EIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAK---IRQYQIMWDLI 79
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
K NV T+ ++ Y R ++++ A+ M K + PN +N + L ++
Sbjct: 80 NAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSK 139
Query: 194 RFEEVSGMME----RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ + + RF+ P TYT L++G+ K +L A +I + M+ G P
Sbjct: 140 NVRKAQEIFDSSKDRFV-----PDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDI 194
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G+V++A+++ ++M + P Y +L+ E++++ A+
Sbjct: 195 VTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLG 254
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ G D+ LI C++ KF +M +G+ P+ T + + RG
Sbjct: 255 MEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGE 314
Query: 370 T 370
T
Sbjct: 315 T 315
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 183/373 (49%), Gaps = 11/373 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A + D G PD V+ T LI +AG ++ A FE M
Sbjct: 276 LCKTGKIDMALKVFEDNSNGDCPPDVVAYST---LIAGLCKAGRLDEACKLFE-----KM 327
Query: 65 VKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+N + F L+D LCK R++ A + + D++ P V Y+ L++G ++
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME--DRNCTPNVITYSSLIDGLCKTG 385
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V+DA+ + M + PNVVTY +L+ G+C VD A+ L++EM G P+ I YN
Sbjct: 386 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 445
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T+IDGL + GR E + + P ++TY+ L+ G+CK ++ A + M+ +
Sbjct: 446 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
LP T++ + G V+DA L +M+ S +PD TY L+ CK ++ A
Sbjct: 506 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+V K M RGC ++ T T LI CR K A E+M+ G+ P+ +T++ L
Sbjct: 566 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625
Query: 364 FKKRGMTALAQKL 376
F G A+K+
Sbjct: 626 FCGTGDLEEARKI 638
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 185/364 (50%), Gaps = 12/364 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K+ + D A LL + VPD + +I +A A+ ++
Sbjct: 65 VIQGLCKSGDLDKACELLEEMRESGPVPDAA---IYNFVIHALCKARNTAKAL---DYFR 118
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ KN + + I++D LCK R+ A+ YF K K+ + P YN+L+NG+
Sbjct: 119 SMECEKNVIT----WTIMIDGLCKANRLPEATTYFAKMKK--KGTVPNEWTYNVLINGFC 172
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ V A EM++ + PNVVTY T++ G+CR +VD A +L ++M + G PN +
Sbjct: 173 KVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV 232
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++ GL G +E +++ P +Y +L+ G CK G ++ A K+ +
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P Y+ K G++++A L+ KM E+ PD +T+ L+ LCK D+L
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A QV + M+ R C ++ T + LI LC+ + +A F+ MI RG+ P+ +T+ L
Sbjct: 353 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412
Query: 361 NDEF 364
F
Sbjct: 413 IHGF 416
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 171/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD S DT L+ + G ++ A+ FE +N D + + + L+ LCK GR
Sbjct: 264 PDKFSYDT---LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA----YSTLIAGLCKAGR 316
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + F K +E S P V + L++G + +++A++ M N TPNV+TY
Sbjct: 317 LDEACKLFEKMRE--NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L++G C+ +V A + K M GIEPN + YN++I G + +ME
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 434
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +L+ G CK G A+++ M ++ P TY+ F K +++
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 494
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L+ M++ PD +T+ L++ C +D A ++ +EM C D+ T T L+
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C++ + EA + M +RG P+ +T+ L D F + G +A +L
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRL 603
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 170/342 (49%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + + V A + + N + + ++ C+Q +V A +
Sbjct: 163 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT----YSTVIHGFCRQTKVDTAYKL 218
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F R+ ++ P + YN LL+G R+ + +A EMR+ + P+ +Y TL+ G
Sbjct: 219 F--RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 276
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++D A+++ ++ P+ + Y+T+I GL +AGR +E + E+ P +
Sbjct: 277 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDV 336
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+T+L+ G CK L+ A ++L+ M R P+ TY+ K G+V DA ++++
Sbjct: 337 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G P+ +TY+ L+ C + +D A+ + +EM GC D+ T LI LC+ +
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA+ F DM + P +T+ L F K +A+ L
Sbjct: 457 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 498
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 157/327 (48%), Gaps = 11/327 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ LCK G + A E + +E P +YN +++ +++N A ++
Sbjct: 62 YAVVIQGLCKSGDLDKACELLEEMRE--SGPVPDAAIYNFVIHALCKARNTAKALDYFRS 119
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E NV+T+ +++G C+ R+ A +M+K+G PN YN +I+G + +
Sbjct: 120 MECEK---NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+++ P +VTY++++ G+C+ ++ A K+ + M+ G +P+ TYN
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G +++A L +M E G PD+ +Y L+ LCK K+D+A++V ++
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ + LI LC+ + DEA FE M P +TF L D K AQ
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356
Query: 375 KLC------NVMSSVPRSMELLDSRCK 395
++ N +V L+D CK
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCK 383
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 191/401 (47%), Gaps = 15/401 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D+A+ L + +P+ V+ +T L+ R G+++ A +E +
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT---LLSGLCRNGLMDEA---YELLD 255
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + ++ L+ LCK G++ A + F D P V Y+ L+ G
Sbjct: 256 EM-RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD--CPPDVVAYSTLIAGLC 312
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A + + +MR+ + P+VVT+ L++G C+ R+ A ++++ M PN I
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++IDGL + G+ + + +R +V P +VTY SL+ G+C ++ A +++ M
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G LP TYN K G+ +A L+ M PD +TY L+ CK +++
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 492
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A + +M + D+ T + L+ C D+A E+M+ P T+ L
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552
Query: 361 NDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSRCK 395
D F K G A+++ M+ +V L+D+ C+
Sbjct: 553 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 593
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 179/389 (46%), Gaps = 43/389 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L KA D A C L +K+ + PD V TF L+ + ++ A E
Sbjct: 307 LIAGLCKAGRLDEA-CKLFEKMRENSCEPDVV---TFTALMDGLCKGDRLQEAQQVLETM 362
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR--------------------- 98
+ + N + +SL +D LCK G+V+ A E F +
Sbjct: 363 EDRNCTPNVITYSSL----IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 418
Query: 99 -----------KELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+E+ + P + YN L++G ++ +A R + +M+ + P+V+T
Sbjct: 419 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 478
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G+C+L R+D A L +M K+ + P+ + ++T+++G AG ++ ++E +
Sbjct: 479 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 538
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + TYTSLV G+CK G + A ++LK M RG P+ TY F + GK
Sbjct: 539 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 598
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRGCDIDLDTSTML 325
A L +M+ +G P+ +TY L+ C L+ A ++ + + + C D+ ++
Sbjct: 599 VAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVM 658
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+ LCR + A E + + G P +
Sbjct: 659 MDGLCRTGRMSAALELLEAIKQSGTPPRH 687
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 32/278 (11%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F +++ NV TY L E R RR+D ++K GI PN Y VI GL
Sbjct: 11 FHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLC 70
Query: 191 EAGRFEEVSGMMERFLVCEPGP--------------------------------TMVTYT 218
++G ++ ++E P P ++T+T
Sbjct: 71 KSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWT 130
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ G CKA L A+ M +G +P+ TYN F K KV A L ++M ES
Sbjct: 131 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY ++ C++ K+D A ++ ++M GC +L T L+ LCR DEA
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 250
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++M RGL P ++ L K G +A K+
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 288
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 13/279 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + D A L D + +PD V TF L+ Y AG+V+ A E
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVV---TFSTLVEGYCNAGLVDDAERLLE--- 535
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+MV + + L+D CK GR+ A + + + P V Y L++ +
Sbjct: 536 --EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK--RGCQPNVVTYTALIDAF 591
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPN 178
R+ A R EM V PNV+TY +L+ G+C ++ A ++++ + R E + +
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKAD 651
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL- 237
Y ++DGL GR ++E P Y +L++G C+ +L A ++L
Sbjct: 652 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 711
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+M +SR P+ Y + ++ G+ E+A L +++
Sbjct: 712 EMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 187/371 (50%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LAK +++ W D + + +TF I++R+YARA ++ A++TF
Sbjct: 112 VVTSLAKIRQYQLMW----DVVAIMRKEGVANVETFGIIMRKYARAQKLDEAVYTFNVME 167
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N + F LL +LCK V+ A E F K ++ ++P + Y+ILL GW
Sbjct: 168 KYGVAHNL----AAFNSLLSALCKSKNVRKAQEIFDK---MNNRFSPDAKTYSILLEGWG 220
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ ++ + +M P++VTYG +V+ C+ RV+ A+ +V++M G +P
Sbjct: 221 RAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTF 280
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R E+ + FL E P +V Y +L+ +CK E A +++
Sbjct: 281 IYSILVHTYGVDMRIEDA---VAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVM 337
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M G P+ T+N GK ++A ++R MI+ PD TY +++K+ C+
Sbjct: 338 DDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTMMIKMFCEN 396
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
DK+++A++V K M+ + + T ++LI+ LC + +A EDMI +G+ P TF
Sbjct: 397 DKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTF 456
Query: 358 KRLNDEFKKRG 368
+L K G
Sbjct: 457 GKLRQLLLKEG 467
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 128/237 (54%), Gaps = 3/237 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D+LCK GRV+ A + PT +Y+IL++ + ++DA +L+
Sbjct: 247 YGIMVDALCKTGRVEEAVCVVQDMSS--RGCQPTTFIYSILVHTYGVDMRIEDAVAAFLD 304
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+ + P+VV Y L+ +C++++ + A R++ +M+ GI PN+ +N +++ L+ G+
Sbjct: 305 MEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGK 364
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + R ++ P TYT ++K +C+ +E A K+ K M + FLPS T++
Sbjct: 365 DDEAYRVF-RSMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSV 423
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
G+V A L MIE G P T+ L ++L KE + D+ + ++MK
Sbjct: 424 LINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMK 480
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 128 AERF--WLEMRKENVTPNVV-TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
A RF W +K V + V +Y T+V ++R+ +V MRKEG+ N +
Sbjct: 87 AYRFFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGV-ANVETFGI 145
Query: 185 VIDGLVEAGRFEEVS---GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
++ A + +E +ME++ V + + SL+ CK+ ++ A +I M
Sbjct: 146 IMRKYARAQKLDEAVYTFNVMEKYGVAH---NLAAFNSLLSALCKSKNVRKAQEIFDKMN 202
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+R F P TY+ + + + +Y M+ +G PD +TY I++ LCK +++
Sbjct: 203 NR-FSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVE 261
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ V ++M RGC ++L+H + ++A A F DM + G++P + + L
Sbjct: 262 EAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALI 321
Query: 362 DEFKK 366
F K
Sbjct: 322 TAFCK 326
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
RK+ A TVR Y+ ++ + + + MRKE V NV T+G ++ Y R
Sbjct: 95 RKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGVA-NVETFGIIMRKYARA 153
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+++D A+ M K G+ N +N+++ L ++ + + ++ + P TY
Sbjct: 154 QKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDK-MNNRFSPDAKTY 212
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+ L++G+ +A L ++ M++ G P TY K G+VE+A+ + + M
Sbjct: 213 SILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSS 272
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G P Y IL+ + +++ A+ +M+ G D+ LI C++ KF+
Sbjct: 273 RGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFEN 332
Query: 338 ASAEFEDMIRRGLVPHYLTF 357
A +DM G+ P+ T+
Sbjct: 333 AFRVMDDMQGHGISPNSRTW 352
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L++L G+ A F + + + P Y +++ + + ++ A + W
Sbjct: 352 WNIILNTLISLGKDDEAYRVF---RSMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKY 408
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P++ T+ L+ G C V +A L+++M ++GI P + + L++ GR
Sbjct: 409 MRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 468
Query: 195 FEEVSGMMERFLVCEPGP 212
+ + ++E+ + P
Sbjct: 469 KDVLDFLVEKMKILAQEP 486
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG----RFEEVSGMMERFLVCEPGPTMVTY 217
+A L E+ G+ + +V+ L AG RF E + +R VC T+ +Y
Sbjct: 53 KASALEHELDHSGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRG-VC--AHTVRSY 109
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
++V K + ++ +M G + + T+ R +++ K+++A+ + M +
Sbjct: 110 HTVVTSLAKIRQYQLMWDVVAIMRKEG-VANVETFGIIMRKYARAQKLDEAVYTFNVMEK 168
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G + ++ LL LCK + A ++ +M R D T ++L+ R +
Sbjct: 169 YGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSP-DAKTYSILLEGWGRAPSLPK 227
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ DM+ G P +T+ + D K G A + MSS
Sbjct: 228 MREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSS 272
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 194/386 (50%), Gaps = 9/386 (2%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K+ A LL D + VPD V T+ LI G +E A+ F A D+
Sbjct: 327 KSGMLQEATELLKDAVFKGFVPDRV---TYCSLINGLCAEGDIERALELFNEAQAKDLKP 383
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+ ++ L+ LC+QG + A + ++ E + P + YNI++NG + N+
Sbjct: 384 DL----VVYNSLVKGLCRQGLILHALQVMNEMVE--EGCHPDIWTYNIIINGLCKMGNIS 437
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + + P+V T+ TL++GYC+ ++D A++LV+ M GI P+ I YN+V+
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+GL +AG+ +EV+ E ++ P +TY L++ +CK LE AS ++ M G +
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P ++N F + G ++ A L++K+ E GY+ T++IL+ + + +A ++
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM +G DL T +L+ LC+ D A A +MI +G VP TF R+ +
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM 677
Query: 367 RGMTALAQKLCNVMSSVPRSMELLDS 392
+ A + ++M + E++D+
Sbjct: 678 NHRVSEAVAIIHIMVRMGVVPEVVDT 703
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 143/291 (49%), Gaps = 3/291 (1%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
I + LC+ GR++ A + + AP V YN L+ G + V++A ++ M
Sbjct: 250 NIWIRGLCEDGRLEEAVALVER---MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ P+ TY T+++GYC+ + A L+K+ +G P+ + Y ++I+GL G
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
E + + P +V Y SLVKG C+ G + A +++ M+ G P TYN
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K G + DA + I GY PD T++ L+ CK KLD A+Q+ + M G
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
D+ T +++ LC+ K E + FE+MI +G P+ +T+ L + F K
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCK 537
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 172/409 (42%), Gaps = 70/409 (17%)
Query: 25 HEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE-----------FANNLDM--------- 64
H PD + + +V I+ YARAG + AA+ FE A N M
Sbjct: 64 HLAPDSL-QPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYH 122
Query: 65 -------VKNFDSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYN 113
V+ +G A + L S C GR A E P Y
Sbjct: 123 DQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAA--YC 180
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++ G + + +A + EM +V P+V T+ ++ C+ V + L+ ++ K
Sbjct: 181 TVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKR 240
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G+ N N I GL E GR EE ++ER + P +VTY +L++G CK ++ A
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVER-MGAYVAPDVVTYNTLMRGLCKDSKVQEA 299
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
++ L M+++G +P TYN + K G +++A L + + G+ PDR+TY L+
Sbjct: 300 AQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLING 359
Query: 294 LCKED-----------------KLDL------------------AIQVSKEMKCRGCDID 318
LC E K DL A+QV EM GC D
Sbjct: 360 LCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPD 419
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ T ++I+ LC+M +A+ D I +G +P TF L D + KR
Sbjct: 420 IWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKR 468
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 3/310 (0%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
DS L+ + + + GR++AA + F + + P YN +++ + A
Sbjct: 68 DSLQPLYVASIQAYARAGRLRAAVDAFERMDLF--ACPPAAPAYNAIMDALVNAAYHDQA 125
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ ++ M V P+ T+ ++ +C R A+RL++ + + G + Y TV+ G
Sbjct: 126 HKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRG 185
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L G + + L + P + T+ +++ C+ GD+ + +L ++ RG +
Sbjct: 186 LYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSAN 245
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
T N + R + G++E+A+ L +M + PD +TY+ L++ LCK+ K+ A Q
Sbjct: 246 KFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M +GC D T +I C+ EA+ +D + +G VP +T+ L + G
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Query: 369 MTALAQKLCN 378
A +L N
Sbjct: 365 DIERALELFN 374
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 188/372 (50%), Gaps = 16/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + +AW +L + + VP+ V T+ L+ RA V A+
Sbjct: 232 LVDGLCKESKVAAAWEVLREMLDAGCVPNLV---TYNSLLHGLCRARRVSDALALMR--- 285
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM + + L+D LCK GRVK A +D+ P + +YN+L+NG
Sbjct: 286 --DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM--IDKGGTPDLMIYNMLINGL 341
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ V ++ + P+VVTY +++ G CR R+D A RL+ ++ G P+
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I+Y+T+IDGL +AG+ +E + E +VTY++L+ G CKAG ++ A +L
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G PS TYN + +++A+ L +M S P +TY+IL+ +C+ ++
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521
Query: 300 LDLAIQVSKEMKCR-----GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+D A+ + ++ K R G +D + LI LC+ + EA F++MI G++P +
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581
Query: 355 LTFKRLNDEFKK 366
+T+ L + KK
Sbjct: 582 ITYSILLEGLKK 593
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 169/338 (50%), Gaps = 8/338 (2%)
Query: 25 HEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
H++ D S + T+ +LI +A V A+ E + + IL+D L
Sbjct: 181 HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMK----ARGCSPDVITYTILVDGL 236
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK+ +V AA E R+ LD P + YN LL+G R++ V DA +M TP
Sbjct: 237 CKESKVAAAWEVL--REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP 294
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
NVVTYGTL++G C++ RV A ++ +M +G P+ ++YN +I+GL +A + +E ++
Sbjct: 295 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
R + P +VTY+S++ G C++ L+ A ++L + SRG P Y+ K
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GKV++A +LY M G D +TY L+ LCK ++D A + M G T
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LI LC + DEA E+M R P +T+ L
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 512
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 164/335 (48%), Gaps = 17/335 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+R + R G ++ A F+ + ++V N L IL+D LCK R A
Sbjct: 11 TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNV----FLCSILIDGLCKAKRSIDALRC 66
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F R +Y LL+G ++ K + A EMR PNVVTY +L++G
Sbjct: 67 F--RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-------- 206
C+ DRA L + M+ P+ + YNT++DGL G+ E + + L
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 207 -VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
C P ++TY+ L+ G CKA + A ++L+ M +RG P TY K KV
Sbjct: 185 DRCS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A + R+M+++G P+ +TY+ LL LC+ ++ A+ + ++M CRGC ++ T L
Sbjct: 243 AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 302
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
I LC++ + +A A DMI +G P + + L
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNML 337
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 15/334 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D LCK A E F K ++ S P++ YN LL+G FR+ ++ A + E
Sbjct: 117 YNSLIDGLCKNNEPDRAQELFEHMKSVECS--PSMVTYNTLLDGLFRTGKLERAMALFQE 174
Query: 135 M-------RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
M + +PNV+TY L++G C+ RV +A+ L++ M+ G P+ I Y ++D
Sbjct: 175 MLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD 234
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL + + ++ L P +VTY SL+ G C+A + A +++ M RG P
Sbjct: 235 GLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP 294
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TY K G+V+DA + MI+ G TPD + Y++L+ LCK D++D +I +
Sbjct: 295 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ G D+ T + +I+ LCR + DEA + RG P + + L D K
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414
Query: 368 GMTALAQKLCNVMSS------VPRSMELLDSRCK 395
G A L VM+ V L+D CK
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCK 448
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 151/301 (50%), Gaps = 9/301 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL C+ G + A F + + ++ P V + +IL++G ++K DA R +
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRS--KNLVPNVFLCSILIDGLCKAKRSIDALRCFRA 69
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + + V Y L+ G + +R+D+A+ ++ EMR G EPN + YN++IDGL +
Sbjct: 70 MQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNE 129
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR-------GFLP 247
+ + E E P+MVTY +L+ G + G LE A + + M+ R P
Sbjct: 130 PDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TY+ K +V A+ L M G +PD +TY IL+ LCKE K+ A +V
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+EM GC +L T L+H LCR + +A A DM RG P+ +T+ L D K
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 309
Query: 368 G 368
G
Sbjct: 310 G 310
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 150/299 (50%), Gaps = 5/299 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFH-----KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
+ LLD L + G+++ A F + ++D +P V Y++L++G ++ V A
Sbjct: 152 YNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAV 211
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
M+ +P+V+TY LV+G C+ +V A +++EM G PN + YN+++ GL
Sbjct: 212 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 271
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
A R + +M P +VTY +L+ G CK G ++ A +L MI +G P
Sbjct: 272 CRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDL 331
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
YN K +V++++ L R+ + G PD +TY ++ LC+ ++LD A ++
Sbjct: 332 MIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLY 391
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+K RGC D+ + LI LC+ K DEA +E M G +T+ L D K G
Sbjct: 392 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 15/286 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA + D + LL + G PD V T+ +I R+ ++ A +
Sbjct: 337 LINGLCKADQVDESIALLRRAVSGGIKPDVV---TYSSVIYGLCRSNRLDEACRLLLYVK 393
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + L+ L+D LCK G+V A + + V Y+ L++G
Sbjct: 394 S----RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA--GDGCDADVVTYSTLIDGLC 447
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V +A M + P+ +TY +L++G C L +D AI LV+EM + P+A+
Sbjct: 448 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 507
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF---LVCEPGPTM--VTYTSLVKGYCKAGDLEGASK 235
YN +I G+ R + ++E+ V G + + Y+SL+ G CKAG + A
Sbjct: 508 TYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALD 567
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL-YRKMIESGY 280
+ MI G +P TY+ K + + +L +M++ GY
Sbjct: 568 YFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 613
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 48/268 (17%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+V TY L+ G+CR +D+A R EMR + + PN + + +IDGL
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGL------------ 54
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
CKA A + + M G + Y K
Sbjct: 55 -----------------------CKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWK 91
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
+++ A+ + +M + G P+ +TY+ L+ LCK ++ D A ++ + MK C + T
Sbjct: 92 EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVT 151
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRR-------GLVPHYLTFKRLNDEFKKRGMTALAQ 374
L+ L R K + A A F++M+ R P+ +T+ L D K + A
Sbjct: 152 YNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAV 211
Query: 375 KLCNVMSSVPRSME------LLDSRCKD 396
+L M + S + L+D CK+
Sbjct: 212 ELLESMKARGCSPDVITYTILVDGLCKE 239
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 175/316 (55%), Gaps = 2/316 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F+++++ LCK G+ + A + K ++P+V YN +++G+ ++ + A+ E
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAW--GFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PN +T+ L++G+CR V A ++ +EM+++G++PN + YN++I+GL G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G+ ++ P +VTY +L+ G+CK L+ A ++L + RG P+ T+N
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K G+++DA L M+++G P+ TY+ L+ C+E + A +++KEM+ G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
DL T +L+ LC+ + +A ++M GL P +LT+ L D + + G + A
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529
Query: 375 KLCNVMSSVPRSMELL 390
+ +M R ++
Sbjct: 530 NVRTLMEKKGRRANIV 545
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 177/372 (47%), Gaps = 17/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L K +F A ++ D P ++ +T +I Y +AG M +A E
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNT---IIDGYCKAGKMFKADALLKEM- 290
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ K F IL+D C+ V AA + F + + Q P V YN L+NG
Sbjct: 291 ----VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR--QGLQPNVVTYNSLINGL 344
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A +M + PNVVTY L+ G+C+ + + A ++ ++ K G+ PN
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 180 IVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
I +NT+ID +AGR ++ + MM VC P + TY L+ G+C+ G+++ A K+
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC---PNVSTYNCLIVGFCREGNVKEARKL 461
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M G TYN K G+ A+ L +M E G P LTY+ L+ +
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR 521
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E A+ V M+ +G ++ T +LI C K +EA+ +M+ +GL+P+ T
Sbjct: 522 EGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581
Query: 357 FKRLNDEFKKRG 368
+ L DE ++G
Sbjct: 582 YDILRDEMMEKG 593
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++L+ + K G + A E F + D + + N +L + + E +
Sbjct: 161 IVDMLVWAYVKNGEMDLALEGFDRAG--DYGFRLSALSCNPMLVSLVKEGRIGVVESVYK 218
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + NVVT+ ++ G C++ + +A +V++M+ G P+ I YNT+IDG +AG
Sbjct: 219 EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAG 278
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + +++ + P +T+ L+ G+C+ ++ A K+ + M +G P+ TYN
Sbjct: 279 KMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYN 338
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
GK+++A+ L KM G P+ +TY+ L+ CK+ L A ++ ++ R
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T LI + + D+A M+ G+ P+ T+ L F + G A
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 374 QKLCNVM 380
+KL M
Sbjct: 459 RKLAKEM 465
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 116/234 (49%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N + LV Y + +D A+ G +A+ N ++ LV+ GR V +
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + G +VT+ ++ G CK G + A +++ M + GF PS TYN + K
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GK+ A L ++M+ P+ +T++IL+ C+++ + A +V +EM+ +G ++ T
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LI+ LC K DEA + M GL P+ +T+ L + F K+ M A+++
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMV-EAAIWTFEFA 59
+I KA D A+ L + P+ T+ LI + R G V EA E
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNV---STYNCLIVGFCREGNVKEARKLAKEME 466
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + + IL+D+LCK+G + A + E+ P+ YN L++G+
Sbjct: 467 GN-----GLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV--GLNPSHLTYNALIDGY 519
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
FR N A M K+ N+VTY L++G+C +++ A RL+ EM ++G+ PN
Sbjct: 520 FREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 579
Query: 180 IVYNTVIDGLVEAGRFEEVSGMM 202
Y+ + D ++E G ++ G +
Sbjct: 580 TTYDILRDEMMEKGFIPDIDGHL 602
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 182/350 (52%), Gaps = 18/350 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
MI + K + FD AW L+D + V VS TF +L+RRY RAG+ A+ F
Sbjct: 149 MIDLAGKLRHFDLAW-HLIDLMKSRGVRITVS--TFSVLVRRYVRAGLAAEAVHAFNRME 205
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
++ D V F I++ SLCK+ R A +F L + P V VY L+
Sbjct: 206 DYGCKPDKVS--------FSIVISSLCKKRRASEAELFF---DSLKHKFEPDVIVYTSLV 254
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+GW R+ ++ AE + +M++ V PNV TY +++ CR ++ RA + EM G +
Sbjct: 255 HGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCD 314
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PNA+ +N+++ V+AGR E+V + + ++Y L++ +CK +L+ A K+
Sbjct: 315 PNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKV 374
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M+ +G P+ +T+N F ++ V A +Y KM E P+ LTY+IL+++
Sbjct: 375 LDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFAD 434
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+D+ +++ KEM + +++T +LI + C ++ A ++M+
Sbjct: 435 SKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMV 484
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ V V T+ LV Y R A+ M G +P+ + ++ VI L + R
Sbjct: 169 MKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRR 228
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + L + P ++ YTSLV G+C+AGD+ A ++ M G P+ TY+
Sbjct: 229 ASEAELFFDS-LKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSI 287
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G++ A +++ +MI++G P+ +T++ L+++ K + + +QV +MK G
Sbjct: 288 VIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLG 347
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C D + LI C+ DEA + M+++G+ P+ TF +
Sbjct: 348 CAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSI 393
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
T+ T++ LV+ Y +AG A M G P +++ K + +A L+
Sbjct: 177 TVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEA-ELF 235
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++ + PD + Y L+ C+ + A +V +MK G ++ T +++I LCR
Sbjct: 236 FDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRC 295
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME---- 388
+ A F +MI G P+ +TF L K G T ++ N M + + +
Sbjct: 296 GQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISY 355
Query: 389 --LLDSRCKD 396
L++S CKD
Sbjct: 356 NFLIESHCKD 365
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 199/386 (51%), Gaps = 22/386 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
MI + K ++FD AW L+ L K E+P +TF IL+RRY +AG+ A+ F
Sbjct: 152 MIDLAGKVRQFDLAWQLIDLMKTRNVEIP----VETFTILVRRYVKAGLAAEAVHAF--- 204
Query: 60 NNLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
N ++ D G F +++ SL K+ R A +F L + P V VY L
Sbjct: 205 NRME-----DYGCKPDKIAFSVVISSLSKKRRAIEAQSFF---DSLKDRFEPDVVVYTSL 256
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++GW R+ N+ +AER + EM+ + PNV TY +++ CR ++ RA + EM G
Sbjct: 257 VHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 316
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+PNAI +N ++ V+AGR E+V + + P +TY L++ +C+ +LE A K
Sbjct: 317 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 376
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
IL + +G + +++N F SK G V A ++ KM + P+ +TY+IL+++
Sbjct: 377 ILN-SVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFA 435
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHY 354
+ D+ +++ KEM + + +T +LI C + ++ A + F++MI + L P
Sbjct: 436 DKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSL 495
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVM 380
++ + + +K G ++L M
Sbjct: 496 PVYEMVLQQLRKAGQLKKHEELVEKM 521
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+R + +AG E + + L + A + L++S C+ ++ A +
Sbjct: 322 TFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPD----AITYNFLIESHCRDDNLEEAVKI 377
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K+ A + +N + + +V A R + +M+ PN VTY L+ +
Sbjct: 378 LNSVKKGCNLNASS---FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMF 434
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-GPT 213
+ D ++L KEM + IEPNA Y +I G + + + + P+
Sbjct: 435 ADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPS 494
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ Y +++ KAG L+ ++++ M++RGF+ P
Sbjct: 495 LPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 530
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
E G + Y ++ K + A +++ +M +R T+ R + K G +A
Sbjct: 141 EFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEA 200
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
++ + +M + G PD++ + +++ L K+ + A +K R + D+ T L+H
Sbjct: 201 VHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHG 259
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
CR EA F +M G+ P+ T+ + D + G A + + M V
Sbjct: 260 WCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDV 314
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 195/386 (50%), Gaps = 9/386 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L + +SKDTF +++RRYARA V+ A+ TFE +
Sbjct: 171 LIEALGKIKQFKLVWSL----VETMRCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMS 226
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + S + L+D+L K +VK A + + K + + P ++ Y +L+ GW
Sbjct: 227 ----IFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGK-FVPDLKTYTVLMEGWG 281
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K++ + + EM + P+VV YG L+ +C+ + D AI++ EM G P+
Sbjct: 282 HEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPH 341
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VY +I+GL R +E E++ + T ++V YC+A E A K++ M
Sbjct: 342 VYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEM 401
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
P+ TY+ Y K K E+A N++++M G P TY +++ + C ++
Sbjct: 402 RECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRV 461
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A+ V K+M RG + + LI+ LC + +EA F++M+ +G+ P F L
Sbjct: 462 DMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNL 521
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRS 386
+ + G +LAQ++ + + ++ ++
Sbjct: 522 KEALVEGGRISLAQEMASKLDAIRKT 547
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 138/330 (41%), Gaps = 65/330 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L+K+K+ A + + K G VPD T+ +L+ W E
Sbjct: 240 LIDTLSKSKQVKKAQAIYKEMKRKGKFVPDL---KTYTVLMEG-----------WGHE-- 283
Query: 60 NNLDMVKN-----FDSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTV 109
+L MVK D+G + +L+ + CK G+ A + F+ E++ S P+
Sbjct: 284 KDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFY---EMEASGCMPSP 340
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
VY +L+NG + + +A +++ + +K V T +V YCR + + A ++V E
Sbjct: 341 HVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDE 400
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG---------------- 211
MR+ I PN+ Y+ ++ L+++ +FEE + +R + CEP
Sbjct: 401 MRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGR 460
Query: 212 -----------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
P M +++L+ G C LE A + M+ +G P ++
Sbjct: 461 VDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSN 520
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
+ G++ A + K+ TP R
Sbjct: 521 LKEALVEGGRISLAQEMASKLDAIRKTPFR 550
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 180/372 (48%), Gaps = 9/372 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A + D G PD V+ T LI + G ++ A FE
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYST---LIAGLCKTGRLDEACKLFEKMRE--- 210
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ + F L+D LCK R++ A + + D++ P V Y+ L++G ++
Sbjct: 211 -NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME--DRNCTPNVITYSSLIDGLCKTGQ 267
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V+DA+ + M + PNVVTY +L+ G+C VD A+ L++EM G P+ I YNT
Sbjct: 268 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 327
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+IDGL + GR E + + P ++TY+ L+ G+CK ++ A + M+ +
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
LP T++ + G V+DA L +M+ S +PD TY L+ CK ++ A
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 447
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V K M RGC ++ T T LI CR K A E+M+ G+ P+ +T++ L F
Sbjct: 448 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507
Query: 365 KKRGMTALAQKL 376
G A+K+
Sbjct: 508 CGTGDLEEARKM 519
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 154/288 (53%), Gaps = 2/288 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I++D LCK R+ A+ YF K K+ + P YN+L+NG+ + V A EM+
Sbjct: 12 IMIDGLCKANRLPEATTYFAKMKK--KGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 69
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ + PNVVTY T++ G+CR +VD A +L ++M + G PN + YNT++ GL G +
Sbjct: 70 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 129
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E +++ P +Y +L+ G CK G ++ A K+ + + P Y+
Sbjct: 130 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G++++A L+ KM E+ PD +T+ L+ LCK D+L A QV + M+ R C
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 249
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ T + LI LC+ + +A F+ MI RG+ P+ +T+ L F
Sbjct: 250 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 171/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD S DT L+ + G ++ A+ FE +N D + + + L+ LCK GR
Sbjct: 145 PDKFSYDT---LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA----YSTLIAGLCKTGR 197
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + F K +E S P V + L++G + +++A++ M N TPNV+TY
Sbjct: 198 LDEACKLFEKMRE--NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L++G C+ +V A + K M GIEPN + YN++I G + +ME
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +L+ G CK G A+++ M ++ P TY+ F K +++
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 375
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L+ M++ PD +T+ L++ C +D A ++ +EM C D+ T T L+
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C++ + EA + M +RG P+ +T+ L D F + G +A KL
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKL 484
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 169/342 (49%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + + V A + + N + + ++ C+Q +V A +
Sbjct: 44 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT----YSTVIHGFCRQTKVDTAYKL 99
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F R+ ++ P + YN LL+G R+ + +A EMR+ + P+ +Y TL+ G
Sbjct: 100 F--RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 157
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++D A+++ ++ P+ + Y+T+I GL + GR +E + E+ P +
Sbjct: 158 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDV 217
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+T+L+ G CK L+ A ++L+ M R P+ TY+ K G+V DA ++++
Sbjct: 218 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G P+ +TY+ L+ C + +D A+ + +EM GC D+ T LI LC+ +
Sbjct: 278 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA+ F DM + P +T+ L F K +A+ L
Sbjct: 338 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 379
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 191/401 (47%), Gaps = 15/401 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D+A+ L + +P+ V+ +T L+ R G+++ A +E +
Sbjct: 83 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT---LLSGLCRNGLMDEA---YELLD 136
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + ++ L+ LCK G++ A + F D P V Y+ L+ G
Sbjct: 137 EMRE-RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD--CPPDVVAYSTLIAGLC 193
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A + + +MR+ + P+VVT+ L++G C+ R+ A ++++ M PN I
Sbjct: 194 KTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 253
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++IDGL + G+ + + +R +V P +VTY SL+ G+C ++ A +++ M
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G LP TYN K G+ +A L+ M PD +TY L+ CK +++
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A + +M + D+ T + L+ C D+A E+M+ P T+ L
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433
Query: 361 NDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSRCK 395
D F K G A+++ M+ +V L+D+ C+
Sbjct: 434 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 474
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 140/268 (52%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V + I+++G ++ + +A ++ +M+K+ PN TY L+ G+C++ +V RA L+K
Sbjct: 7 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
EM++ G+ PN + Y+TVI G + + + + + P +VTY +L+ G C+ G
Sbjct: 67 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
++ A ++L M RG P +Y+ K GK++ A+ ++ PD + Y
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ LCK +LD A ++ ++M+ C+ D+ T T L+ LC+ + EA E M R
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKL 376
P+ +T+ L D K G AQ++
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 178/389 (45%), Gaps = 43/389 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K D A C L +K+ + PD V TF L+ + ++ A E
Sbjct: 188 LIAGLCKTGRLDEA-CKLFEKMRENSCEPDVV---TFTALMDGLCKGDRLQEAQQVLETM 243
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR--------------------- 98
+ + N + +SL +D LCK G+V+ A E F +
Sbjct: 244 EDRNCTPNVITYSSL----IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299
Query: 99 -----------KELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+E+ + P + YN L++G ++ +A R + +M+ + P+V+T
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 359
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G+C+L R+D A L +M K+ + P+ + ++T+++G AG ++ ++E +
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 419
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + TYTSLV G+CK G + A ++LK M RG P+ TY F + GK
Sbjct: 420 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 479
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRGCDIDLDTSTML 325
A L +M+ +G P+ +TY L+ C L+ A ++ + + + C D+ ++
Sbjct: 480 VAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVM 539
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+ LCR + A E + + G P +
Sbjct: 540 MDGLCRTGRMSAALELLEAIKQSGTPPRH 568
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 20/352 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + V++A+ E + + + + L+D LCK GR A+
Sbjct: 289 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT----YNTLIDGLCKTGRAPEANRL 344
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K + P V Y+ L+ G+ + + + A + +M K+ V P+VVT+ TLVEGY
Sbjct: 345 FGDMKA--KFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C VD A RL++EM P+ Y +++DG + GR E +++R P +
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT+L+ +C+AG A K+L+ M+ G P+ TY F G +E+A RK
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA----RK 518
Query: 275 MIE-----SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
M+E D Y +++ LC+ ++ A+++ + +K G D LI L
Sbjct: 519 MLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578
Query: 330 CRMYKFDEASAEFEDM-IRRGLVPHYLTFKRLNDEFKKRG----MTALAQKL 376
C+ + +A E+M + R P+ ++ + E + G ALA +L
Sbjct: 579 CQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 13/279 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + D A L D + +PD V TF L+ Y AG+V+ A E
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVV---TFSTLVEGYCNAGLVDDAERLLE--- 416
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+MV + + L+D CK GR+ A + + + P V Y L++ +
Sbjct: 417 --EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK--RGCQPNVVTYTALIDAF 472
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPN 178
R+ A + EM V PNV+TY +L+ G+C ++ A ++++ + R E + +
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKAD 532
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL- 237
Y ++DGL GR ++E P Y +L++G C+ +L A ++L
Sbjct: 533 MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE 592
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+M +SR P+ Y + ++ G+ E+A L +++
Sbjct: 593 EMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 166/314 (52%), Gaps = 5/314 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD---AERF 131
F I+++ LCK G++ A + K + + V YN L++G+ + + A+
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKV--RGVSANVITYNTLIDGYCKMGKIGKMYKADAI 223
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EMR + + PN VT+ L++G+C+ + V A+++ EM ++G++PN + YN++I+GL
Sbjct: 224 LKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCN 283
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E + + ++ + P ++T+ +L+ G+CK ++ A ++ M +G P+ TT
Sbjct: 284 NGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTT 343
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + K +EDA LYR M+ G PD TY+ L+ LC++ L+ A + EM
Sbjct: 344 YNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMD 403
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ DL T +LI LC + +A ++M R+GL P LT+ + D + K G
Sbjct: 404 TKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLR 463
Query: 372 LAQKLCNVMSSVPR 385
A L + M V R
Sbjct: 464 AALNLRSQMEKVGR 477
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+D CK V AA + F + Q P V YN L+NG + V +A +
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNR--QGVKPNVVTYNSLINGLCNNGKVNEATALRDQ 296
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN++T+ L+ G+C+ + V +A L +M K+GI PN YN +ID +
Sbjct: 297 MVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDEN 356
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ + L P + TY L+ G C+ GDLE A ++ M ++ TYN
Sbjct: 357 MEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNI 416
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+++ A+ L +M G P +LTY+ ++ CKE L A+ + +M+ G
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T +LI C+ K ++A+ +M+ +GL+P+ +T++ + +E ++G
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 156/318 (49%), Gaps = 5/318 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F + + + +IL+ + K R + E F ++ D +V N L++G + + D
Sbjct: 89 FCANSIIVDILVWAYAKNLRTRLGFEAF--KRASDYGLKLSVTSCNPLMSGLVKVGEIGD 146
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
E + EM + + P ++++ ++ G C++ ++++A ++++M+ G+ N I YNT+ID
Sbjct: 147 MEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLID 206
Query: 188 GLVEAGRFEEV---SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
G + G+ ++ +++ P VT+ L+ G+CK ++ A K+ M +G
Sbjct: 207 GYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQG 266
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ TYN GKV +A L +M+ S P+ +T++ LL CK + A
Sbjct: 267 VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAG 326
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ +M +G ++ T +LI C+ ++A A + M+ +G+ P T+ L
Sbjct: 327 ELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGL 386
Query: 365 KKRGMTALAQKLCNVMSS 382
++G A+ L + M +
Sbjct: 387 CRKGDLEAARNLVSEMDT 404
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 150/327 (45%), Gaps = 17/327 (5%)
Query: 85 QGRVKAASEY------FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
Q R++++SE R + QS P RV LL+ F + + ++ + L + +
Sbjct: 30 QLRLRSSSETGSNNNKTSSRSNIGQSSKPISRVQTPLLS--FINYSTQEQTQILLSVSGD 87
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ N + LV Y + R K G++ + N ++ GLV+ G ++
Sbjct: 88 SFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDM 147
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ + + PT++++ ++ G CK G L A I++ M RG + TYN
Sbjct: 148 EFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDG 207
Query: 259 FSKFGKVE---DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ K GK+ A + ++M G P+ +T++IL+ CK+ + A++V EM +G
Sbjct: 208 YCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGV 267
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ T LI+ LC K +EA+A + M+ L P+ +T L + F K M A +
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGE 327
Query: 376 LCN------VMSSVPRSMELLDSRCKD 396
L + + +V L+D+ CKD
Sbjct: 328 LFDDMPKQGITPNVTTYNILIDAYCKD 354
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 27/257 (10%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
P+ ++ + L+ + + MV+ A F+ DM K + + IL+D+ CK
Sbjct: 304 PNIITHNA---LLNGFCKNKMVKQAGELFD-----DMPKQGITPNVTTYNILIDAYCKDE 355
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + R L + P V YN L+ G R +++ A EM +++ +++T
Sbjct: 356 NMEDAFALY--RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L++ C + +A+RL+ EM ++G++P+ + YNT+IDG + G + +
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME 473
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ TY L+KG+CK LE A+ +L M+ +G +P+ TY
Sbjct: 474 KVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI------------ 521
Query: 267 DAMNLYRKMIESGYTPD 283
+ +M+E G+ PD
Sbjct: 522 ----VTEEMMEKGFVPD 534
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + + A+ L +G PD T+ LI R G +EAA +
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDV---STYNCLIAGLCRKGDLEAA---RNLVS 400
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILLNG 118
+D K+ + + IL+DSLC +G +K A + RK L P+ YN +++G
Sbjct: 401 EMD-TKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL----KPSQLTYNTMIDG 455
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + N++ A +M K NV TY L++G+C+ +++ A L+ EM ++G+ PN
Sbjct: 456 YCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPN 515
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+ Y V + ++E G ++ G + + V
Sbjct: 516 RMTYEIVTEEMMEKGFVPDIEGHLYKVAV 544
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 19/385 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
MI + K K+F AW L+D + V ++ TF +L+RRY RAG+ A+ F
Sbjct: 154 MIDLAGKVKQFGLAW-YLIDLMKARNVE--ITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
++ N D++ F ++ LCK+ R A +F L + P V VY L+
Sbjct: 211 DYGCNADIIA--------FSNVISILCKKRRAVEAQSFF---DNLKHKFEPDVIVYTSLV 259
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+GW R+ ++ +AE + EM+ ++PNV TY +++ CR ++ RA + EM G
Sbjct: 260 HGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCN 319
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN++ +N +I + AGR E+V + + ++TY L++ +CK +L A K+
Sbjct: 320 PNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKV 379
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M P+ +++N FR +K V A ++ +M E G P+ +TY+IL+++
Sbjct: 380 LNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAV 439
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYL 355
D+ ++ KEM + + +T LI L C M ++ A F +MI + + P
Sbjct: 440 PKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMP 499
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVM 380
+K + +E +K G ++L + M
Sbjct: 500 LYKMVLEELRKAGQLKKHEELVDKM 524
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAAS 92
TF LIR + RAG E + + + +K A L + L+++ CK + A
Sbjct: 324 TFNNLIRVHLRAGRTEKVLQVY------NQMKRLRCAADLITYNFLIETHCKDDNLGEAI 377
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+ + + D P +N + +S++V A R + M++ PN VTY L+
Sbjct: 378 KVLNSMAKND--CTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMR 435
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-- 210
+ + D +L KEM +E +EPN Y +I G + + M R ++ E
Sbjct: 436 MFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNH-AYMFFREMIDEKCI 494
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
P+M Y +++ KAG L+ +++ M+ RGF
Sbjct: 495 KPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGF 529
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 36/247 (14%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ NV VVT+ LV Y R A+ M G + I ++ VI L + R
Sbjct: 174 MKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRR 233
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + L + P ++ YTSLV G+C+AGD
Sbjct: 234 AVEAQSFFDN-LKHKFEPDVIVYTSLVHGWCRAGD------------------------- 267
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ +A +++R+M +G +P+ TY I++ LC+ ++ A V EM G
Sbjct: 268 ----------ISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAG 317
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C+ + T LI + R + ++ + M R +T+ L + K A
Sbjct: 318 CNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAI 377
Query: 375 KLCNVMS 381
K+ N M+
Sbjct: 378 KVLNSMA 384
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
EG E + YN +ID + +F +++ T+VT++ LV+ Y +AG
Sbjct: 142 EGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAE 201
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A M G ++ K + +A + + + + + PD + Y L+
Sbjct: 202 AVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNL-KHKFEPDVIVYTSLVH 260
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+ + A V +EMK G ++ T +++I LCR + A F +M+ G P
Sbjct: 261 GWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNP 320
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCKD 396
+ +TF L + G T ++ N M + + + L+++ CKD
Sbjct: 321 NSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKD 370
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 193/360 (53%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L +++ FD W LL+D + +S + +++ R A+ V+ + +F
Sbjct: 132 MLYILGRSRRFDQIWELLVDMRRKDQ--SLISPRSVQVVLGRIAKVCSVKQTVESFRKFK 189
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L V FD+ F LL +LC++ ++ A +H L + P +R +NILL+GW
Sbjct: 190 KL--VPEFDTAC--FNALLRTLCQEKSMRDARNVYH---SLKHDFRPDLRTFNILLSGW- 241
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K+ ++AE F+ EMR+ V P+VV+Y L++ YC+ R ++RA +++ +MR E I P+ I
Sbjct: 242 --KSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVI 299
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++I GL G+ ++ +++ P + Y + ++ +C A L A ++ M
Sbjct: 300 SYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEM 359
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G P+ TTYN FFR F + + LY++M ++G P+ + L ++ +++K+
Sbjct: 360 VGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKV 419
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++A+++ +M +G + S +L +LC M K E MI +G P ++F+R+
Sbjct: 420 EMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSFRRI 479
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 122/305 (40%), Gaps = 41/305 (13%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
+++L + K VK E F K K+L + +N LL + K+++DA + +
Sbjct: 166 QVVLGRIAKVCSVKQTVESFRKFKKLVPEF--DTACFNALLRTLCQEKSMRDARNVYHSL 223
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K + P++ T+ L+ G+ + + A EMR+ G+EP+
Sbjct: 224 -KHDFRPDLRTFNILLSGW---KSAEEAEGFFDEMREMGVEPD----------------- 262
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+V+Y L+ YCK ++E A K++ M P +Y
Sbjct: 263 ------------------VVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSI 304
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
G+ + A ++ ++M E G PD Y+ ++ C ++L A + EM +G
Sbjct: 305 IGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGL 364
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ T + + ++ M + G +P+ + L F+++ +A +
Sbjct: 365 SPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVEMALE 424
Query: 376 LCNVM 380
L N M
Sbjct: 425 LWNDM 429
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 188/379 (49%), Gaps = 14/379 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K K+ D L+ + G + V T +RR A AG E A+ F+
Sbjct: 118 MVDILGKLKQVDKMRALMEEMRQG----NLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLG 173
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N ++ KN +S +LLD+LCK+ +V+ A F EL +P +NI ++GW
Sbjct: 174 NFELEKNTES----MNLLLDTLCKERKVEQARAIF---LELKPHISPNTHTFNIFIHGWC 226
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V +AE EM+ P V++Y T+++ YCR + L+ +M+ +G PN +
Sbjct: 227 KANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVV 286
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM- 239
Y T++ L + +FEE + ER P + Y +L+ +AG L A ++ ++
Sbjct: 287 TYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVE 346
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRLTYHILLKILCKED 298
M G P+ +TYN F + + A+NL R++ S + PD TY+ +LK K
Sbjct: 347 MPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTG 406
Query: 299 KLD-LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K+D L+ + + +D+ T+LIH LCR K + FE+M+ + + P Y T
Sbjct: 407 KIDSLSNFLDDMVNKHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRYKTC 466
Query: 358 KRLNDEFKKRGMTALAQKL 376
L DE K++ M A+++
Sbjct: 467 ALLLDEIKQKNMHDAAERI 485
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG---LVEAGRFEEVSGMM 202
Y +V+ +L++VD+ L++EMR + N + +TV L AG +E+ +
Sbjct: 114 AYDMMVDILGKLKQVDKMRALMEEMR----QGNLVRLSTVAKAMRRLAGAGEWEDAVRVF 169
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI---LKMMISRGFLPSPTTYNYFFRYF 259
+ E + L+ CK +E A I LK IS P+ T+N F +
Sbjct: 170 DDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLELKPHIS----PNTHTFNIFIHGW 225
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K +V++A ++M G P ++Y +++ C++ ++ +M+ +GC ++
Sbjct: 226 CKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNV 285
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T T ++ L ++ +F+EA E M G P L + L + G
Sbjct: 286 VTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAG 334
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG---YCKAGDL 230
G E Y+ ++D L + + +++ +ME +V +++ K AG+
Sbjct: 107 GYEHAPEAYDMMVDILGKLKQVDKMRALMEEMR----QGNLVRLSTVAKAMRRLAGAGEW 162
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++ + + + + N K KVE A ++ ++ + +P+ T++I
Sbjct: 163 EDAVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLEL-KPHISPNTHTFNIF 221
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CK +++D A +EMK GC + + + +I CR F + +DM +G
Sbjct: 222 IHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGC 281
Query: 351 VPHYLTF 357
P+ +T+
Sbjct: 282 APNVVTY 288
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 194/404 (48%), Gaps = 42/404 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-----------------PDFVSKDTFVILIRRY 43
MI +L K K F +A LLDK+ E+ P+ VS F L+ Y
Sbjct: 86 MILILTKHKHFKTAH-QLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSH-VFSWLMIYY 143
Query: 44 ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ 103
A+AGM+ +I FE + + + + +LL+SL KQ + F K +L
Sbjct: 144 AKAGMINDSIVVFEQIRSCGLKPHLQACT----VLLNSLVKQRLTDTVWKIFKKMVKLGV 199
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+ VYN+L++ +S + + AE+ EM ++ V P++ TY TL+ YC+ A
Sbjct: 200 --VANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ + M + G+ PN + YN+ I G GR E + + R + + VTYT+L+ G
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIKDDVTANHVTYTTLIDG 316
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
YC+ D++ A ++ ++M SRGF P TYN R + G++ +A L +M PD
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+T + L+ CK + + A++V K+M G +D+ + LIH C++ + + A E
Sbjct: 377 NITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELF 436
Query: 344 DMIRRGLVPHYLTFKRLND----------------EFKKRGMTA 371
MI +G P Y T+ L D EF+KRG+ A
Sbjct: 437 SMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 1/275 (0%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP + YN ++G+ R +++A R + E+ K++VT N VTY TL++GYCR+ +D A+R
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALR 328
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L + M G P + YN+++ L E GR E + ++ + P +T +L+ YC
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K D+ A K+ K MI G +Y F K ++E+A MIE G++P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ ++K D ++ +E + RG D+ LI +C++ + D A FE M
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++GLV + F + + + G A L +VM
Sbjct: 509 EKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y + ++ +I + +++R G++P+ +++ LV+ + V + ++ +
Sbjct: 143 YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVAN 202
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ Y LV K+GD E A K+L M +G P TYN + K +A+++
Sbjct: 203 IHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQD 262
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M SG P+ +TY+ + +E ++ A ++ +E+K + T T LI CRM
Sbjct: 263 RMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMN 321
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
DEA E M RG P +T+ + + + G A +L MS
Sbjct: 322 DIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+P ++ L+ Y KAG + + + + + S G P K +
Sbjct: 128 DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+++KM++ G + Y++L+ K + A ++ EM+ +G D+ T LI +
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ EA + + M R G+ P+ +T+ F + G A +L
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 177/350 (50%), Gaps = 9/350 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V + LI + + G V A F+ + K + L+ + G
Sbjct: 360 IPDNV---VYTTLIHGFFKLGHVRTANKWFDEM----LSKKISPDYITYTTLIQGFGQGG 412
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V FH+ + + P Y L++ + ++ + +A EM + +TPN+VT
Sbjct: 413 KVIEPQNLFHEM--ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
YG L++G C+ +D A L+ EMRK+G++ N +YN++++G+ +AG E+ +M+
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V P +TYT+++ YC+ GD++ A K+L+ M+ RG P+ T+N F G +E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D L M+E G PD +TY+ L+K C + ++ ++ K M+ +G D +T +LI
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ EA +++MI +G VP ++ L F K+ A++L
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAREL 700
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 162/353 (45%), Gaps = 13/353 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD++ T+ LI+ + + G V F +M+ + + L+D CK G
Sbjct: 396 PDYI---TYTTLIQGFGQGGKVIEPQNLFH-----EMISRGLKPDEVTYTTLIDVYCKAG 447
Query: 87 RVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ A F E+ Q P + Y L++G + + A EMRK+ + NV
Sbjct: 448 EMVNA---FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y ++V G C+ +++AI+L+KEM GI+P+AI Y TVID G ++ +++
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L PT+VT+ L+ G+C G LE ++L M+ +G +P TYN + +
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+Y++M G PD TY+IL+K CK L A + KEM +G + + L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
I + K EA FE+M GLV + D + G + LC+
Sbjct: 685 IKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 144/273 (52%), Gaps = 2/273 (0%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
SW T YNI++ R VK+A R ++M + TP+VV+Y T+++GYC L + +A
Sbjct: 255 SWNTTS--YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
++L+ +M+ +G++PN YN++I L + G+ E ++ + + P V YT+L+ G
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ K G + A+K M+S+ P TY + F + GKV + NL+ +MI G PD
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+TY L+ + CK ++ A + EM G ++ T LI LC+ + D A+ +
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+M ++GL + + + + K G A KL
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 39/342 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ I++ SLC+ G+VK A ++D +S P V Y+ +++G+ +K A +
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLL---MQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+ + + PN TY +++ C++ + A ++++EM + I P+ +VY T+I G + G
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + L + P +TYT+L++G+ + G + + MISRG P TY
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL----------- 302
+ K G++ +A +L+ +M++ G TP+ +TY L+ LCK +LD
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Query: 303 ------------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
AI++ KEM+ G D D T T +I CR+ D+A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++M+ RGL P +TF L + F GM +L M
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 154/319 (48%), Gaps = 48/319 (15%)
Query: 28 PDFVSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
PD V T+ LI Y +AG MV A F+ + +MV+ + L+D LCK
Sbjct: 431 PDEV---TYTTLIDVYCKAGEMVNA------FSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G + A+E + ++ + V +YN ++NG ++ N++ A + EM + P+ +
Sbjct: 482 GELDTANELLDEMRK--KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGM 201
TY T+++ YCRL +D+A +L++EM G++P + +N +++G G E+ + M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599
Query: 202 MERFLVCEP-------------------------------GPTMVTYTSLVKGYCKAGDL 230
+E+ +V + P TY L+KG+CKA +L
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + K MI +G++P+ T+YN + F K K+ +A L+ +M G D Y+
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719
Query: 291 LKILCKEDKLDLAIQVSKE 309
+ + +E +++ + + E
Sbjct: 720 VDMCYEEGDVEITLNLCDE 738
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 6/246 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
++ +AG +E AI + ++ V D A + ++D+ C+ G + A + +
Sbjct: 509 MVNGICKAGNIEQAI---KLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLL--Q 562
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
+ LD+ PTV +N+L+NG+ ++D +R M ++ + P+ +TY TL++ +C
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
++ ++ K MR +G+ P++ YN +I G +A +E + + + PT+ +Y
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYN 682
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+K + K + A ++ + M G + YN+F + G VE +NL + IE
Sbjct: 683 ALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Query: 279 GYTPDR 284
+R
Sbjct: 743 CLLNER 748
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 10/311 (3%)
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+++ H+ + W P ++I ++ +A + ++ + VVT +
Sbjct: 173 TQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGL---VVTVDSCN 229
Query: 152 EGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
R+ I + +K + GI N YN +I L G+ +E ++ +
Sbjct: 230 AFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS 289
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +V+Y++++ GYC G+L+ A K++ M +G P+ TYN K GK +A
Sbjct: 290 TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEK 349
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ R+M+ PD + Y L+ K + A + EM + D T T LI
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVP 384
+ K E F +MI RGL P +T+ L D + K G A L N M ++
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 385 RSMELLDSRCK 395
L+D CK
Sbjct: 470 TYGALIDGLCK 480
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 173/341 (50%), Gaps = 9/341 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V + LI + + G V A F+ + K + L+ + G
Sbjct: 360 IPDNV---VYTTLIHGFFKLGHVRTANKWFDEM----LSKKISPDYITYTTLIQGFGQGG 412
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V FH+ + + P Y L++ + ++ + +A EM + +TPN+VT
Sbjct: 413 KVIEPQNLFHEM--ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
YG L++G C+ +D A L+ EMRK+G++ N +YN++++G+ +AG E+ +M+
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V P +TYT+++ YC+ GD++ A K+L+ M+ RG P+ T+N F G +E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D L M+E G PD +TY+ L+K C + ++ ++ K M+ +G D +T +LI
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
C+ EA +++MI +G VP ++ L F K+
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 163/353 (46%), Gaps = 13/353 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD++ T+ LI+ + + G V F +M+ + + L+D CK G
Sbjct: 396 PDYI---TYTTLIQGFGQGGKVIEPQNLFH-----EMISRGLKPDEVTYTTLIDVYCKAG 447
Query: 87 RVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ A F E+ Q P + Y L++G + + A EMRK+ + NV
Sbjct: 448 EMVNA---FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y ++V G C+ +++AI+L+KEM GI+P+AI Y TVID G ++ +++
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L PT+VT+ L+ G+C G LE ++L M+ +G +P TYN + +
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+Y++M G PD TY+IL+K CK L A + KEM +G + + L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
I + KF EA FE+M GLV + D + G + LC+
Sbjct: 685 IKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCD 737
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 145/277 (52%), Gaps = 2/277 (0%)
Query: 100 ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR 159
E SW T YNI++ R VK+A R ++M + TP+VV+Y T+++GYC L
Sbjct: 251 EYGISWNTTS--YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGE 308
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+ +A++L+ +M+ +G++PN YN++I L + G+ E ++ + + P V YT+
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G+ K G + A+K M+S+ P TY + F + GKV + NL+ +MI G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD +TY L+ + CK ++ A + EM G ++ T LI LC+ + D A+
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++M ++GL + + + + K G A KL
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 39/342 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ I++ SLC+ G+VK A ++D +S P V Y+ +++G+ +K A +
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLL---MQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+ + + PN TY +++ C++ + A ++++EM + I P+ +VY T+I G + G
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + L + P +TYT+L++G+ + G + + MISRG P TY
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL----------- 302
+ K G++ +A +L+ +M++ G TP+ +TY L+ LCK +LD
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Query: 303 ------------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
AI++ KEM+ G D D T T +I CR+ D+A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++M+ RGL P +TF L + F GM +L M
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 153/319 (47%), Gaps = 48/319 (15%)
Query: 28 PDFVSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
PD V T+ LI Y +AG MV A F+ + +MV+ + L+D LCK
Sbjct: 431 PDEV---TYTTLIDVYCKAGEMVNA------FSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G + A+E + ++ + V +YN ++NG ++ N++ A + EM + P+ +
Sbjct: 482 GELDTANELLDEMRK--KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGM 201
TY T+++ YCRL +D+A +L++EM G++P + +N +++G G E+ + M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599
Query: 202 MERFLVCEP-------------------------------GPTMVTYTSLVKGYCKAGDL 230
+E+ +V + P TY L+KG+CKA +L
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + K MI +G++P+ T+YN + F K K +A L+ +M G D Y+
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719
Query: 291 LKILCKEDKLDLAIQVSKE 309
+ + +E +++ + + E
Sbjct: 720 VDMCYEEGDVEITLNLCDE 738
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
++ +AG +E AI + ++ V D A + ++D+ C+ G + A + +
Sbjct: 509 MVNGICKAGNIEQAI---KLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLL--Q 562
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
+ LD+ PTV +N+L+NG+ ++D +R M ++ + P+ +TY TL++ +C
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRN 622
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
++ ++ K MR +G+ P++ YN +I G +A +E + + + PT+ +Y
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYN 682
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+K + K A ++ + M G + YN+F + G VE +NL + IE
Sbjct: 683 ALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Query: 279 GYTPDR 284
+R
Sbjct: 743 CLLNER 748
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 10/311 (3%)
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+++ H+ + W P ++I ++ +A + ++ + VVT +
Sbjct: 173 TQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGL---VVTVDSCN 229
Query: 152 EGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
R+ I + +K + GI N YN +I L G+ +E ++ +
Sbjct: 230 AFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS 289
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +V+Y++++ GYC G+L+ A K++ M +G P+ TYN K GK +A
Sbjct: 290 TPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEK 349
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ R+M+ PD + Y L+ K + A + EM + D T T LI
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVP 384
+ K E F +MI RGL P +T+ L D + K G A L N M ++
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 385 RSMELLDSRCK 395
L+D CK
Sbjct: 470 TYGALIDGLCK 480
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 200/386 (51%), Gaps = 22/386 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
MI + K ++FD AW L+ L K E+P +TF IL+RRY +AG+ A+ F
Sbjct: 1184 MIDLAGKVRQFDLAWQLIDLMKTRNVEIP----VETFTILVRRYVKAGLAAEAVHAF--- 1236
Query: 60 NNLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
N ++ D G F +++ SL K+ R A +F K+ + P V VY L
Sbjct: 1237 NRME-----DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD---RFEPDVVVYTSL 1288
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++GW R+ N+ +AER + EM+ + PNV TY +++ CR ++ RA + EM G
Sbjct: 1289 VHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 1348
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+PNAI +N ++ V+AGR E+V + + P +TY L++ +C+ +LE A K
Sbjct: 1349 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 1408
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
IL + +G + +++N F SK G V A ++ KM + P+ +TY+IL+++
Sbjct: 1409 ILN-SVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFA 1467
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHY 354
+ D+ +++ KEM + + +T +LI C + ++ A + F++MI + L P
Sbjct: 1468 DKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSL 1527
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVM 380
++ + + +K G ++L M
Sbjct: 1528 PVYEMVLQQLRKAGQLKKHEELVEKM 1553
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+R + +AG E + + L + A + L++S C+ ++ A +
Sbjct: 1354 TFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPD----AITYNFLIESHCRDDNLEEAVKI 1409
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K+ A + +N + + +V A R + +M+ PN VTY L+ +
Sbjct: 1410 LNSVKKGCNLNASS---FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMF 1466
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-GPT 213
+ D ++L KEM + IEPNA Y +I G + + + + P+
Sbjct: 1467 ADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPS 1526
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ Y +++ KAG L+ ++++ M++RGF+ P
Sbjct: 1527 LPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 1562
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
E G + Y ++ K + A +++ +M +R T+ R + K G +A
Sbjct: 1173 EFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEA 1232
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
++ + +M + G PD++ + +++ L K+ + A +K R + D+ T L+H
Sbjct: 1233 VHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHG 1291
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
CR EA F +M G+ P+ T+ + D + G A + + M V
Sbjct: 1292 WCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDV 1346
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 188/371 (50%), Gaps = 12/371 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K ++F W L+ D++ ++ ++ DTF ++ RRY RA +++ A+ TFE
Sbjct: 126 LIEALGKIRQFKMIWNLV-DEMKQRKL---LNGDTFSLIARRYVRAKVIKEALKTFERME 181
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQG-RVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ S F L+D LCK V+ A E F K ++ + P ++ Y IL+ GW
Sbjct: 182 KYGLKPQI----SDFNKLIDVLCKSKFHVEKAQELFDKMRQWN--LEPNLKSYTILIEGW 235
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +N+ + EM+ + P+VVTYG ++ YC+ ++ D AI + +M + + P+
Sbjct: 236 SQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSP 295
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+Y T I GL R +E E+ P TY ++V YC + ++ A +I+
Sbjct: 296 HIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGE 355
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKILCKED 298
M G P+ TY+ + K G+ ++A +++++M E+G P TY I++++ C E+
Sbjct: 356 MKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNEN 415
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+LD+A+ V EMK +G + + LI LC K D+A F+ M+ G+ P F
Sbjct: 416 QLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFS 475
Query: 359 RLNDEFKKRGM 369
GM
Sbjct: 476 AFKRALMAAGM 486
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 148/356 (41%), Gaps = 44/356 (12%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS + V ++ + + AG++ A+ F +A + + F+ +F L+++L G+
Sbjct: 81 PVEVSPELVVAVLNKLSNAGIL--ALSFFRWA---EKQQGFNHNTEIFHALIEAL---GK 132
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ ++ E+ Q ++++ + R+K +K+A + + M K + P + +
Sbjct: 133 IRQFKMIWNLVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDF 192
Query: 148 GTLVEGYCRLR-RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
L++ C+ + V++A L +MR+ +EPN
Sbjct: 193 NKLIDVLCKSKFHVEKAQELFDKMRQWNLEPN---------------------------- 224
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ +YT L++G+ + +L ++ + M GF P TY + K K +
Sbjct: 225 -------LKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYD 277
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A+ +Y M+ P Y + L ++D A + ++ K G + T ++
Sbjct: 278 EAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVV 337
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
C + D+A +M G+ P+ T+ + K G T A + MSS
Sbjct: 338 SAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSS 393
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 161/299 (53%), Gaps = 9/299 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKD---AE 129
F +++ LCK G++ A + K W P V YN L++G+ + V A+
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMK----VWGFWPNVVTYNTLIDGYCKMGRVGKMYKAD 288
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + V+PN VT+ L++G+C+ + A+++ +EM+ +G++P + YN++++GL
Sbjct: 289 AILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ E +++ L P ++TY +L+ GYCK LE A ++ + +G P+
Sbjct: 349 CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNV 408
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
T+N + KFGK+E+A L + M+E G+ P+ TY+ L+ C+E K++ + E
Sbjct: 409 ITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNE 468
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M+CRG D T +LI C + +A+ ++M+ +GL P +LT+ L + + G
Sbjct: 469 MQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 179/344 (52%), Gaps = 12/344 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-FEILLDSLCKQG 86
P+ V+ +T + + R G + A + +MV+N S S+ F +L+D CK
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILK-----EMVENKVSPNSVTFNVLIDGFCKDE 317
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ AA + F + + Q PTV YN L+NG + +A+ EM N+ PNV+T
Sbjct: 318 NLSAALKVFEEMQ--SQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ GYC+ + ++ A L + K+G+ PN I +NT++ G + G+ EE + ++++ +
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEE-AFLLQKVM 434
Query: 207 VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ E G P TY L+ G+C+ G +E +L M RG TYN + + +
Sbjct: 435 L-EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKE 493
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+ A L +M++ G P LTY+ILL C E L A+ + K+M+ G ++ T +
Sbjct: 494 PKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNV 553
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI CR K ++A+ +M+ +GL+P+ T++ + +E ++G
Sbjct: 554 LIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 144/283 (50%), Gaps = 3/283 (1%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D + +V N LL+ + E + EM + ++PN++T+ T++ G C++ +++
Sbjct: 188 DYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLN 247
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV---SGMMERFLVCEPGPTMVTYT 218
+A +V +M+ G PN + YNT+IDG + GR ++ +++ + + P VT+
Sbjct: 248 KAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFN 307
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L+ G+CK +L A K+ + M S+G P+ TYN GK+ +A L +M+ S
Sbjct: 308 VLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSS 367
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
P+ +TY+ L+ CK+ L+ A ++ + +G ++ T L+H C+ K +EA
Sbjct: 368 NLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA 427
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ M+ +G +P+ T+ L F + G + L N M
Sbjct: 428 FLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 33/246 (13%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
K+L +A+E L D IG + P+ + TF L+ Y + G +E A
Sbjct: 387 KLLEEARE-------LFDNIGKQGLTPNVI---TFNTLLHGYCKFGKMEEAF----LLQK 432
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ + K F AS + L+ C++G+++ ++ + A TV YNIL++ W
Sbjct: 433 VMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM-QCRGVKADTV-TYNILISAWCE 490
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
K K A R EM + + P+ +TY L+ GYC + A+ L K+M KEG N +
Sbjct: 491 KKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVT 550
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I G G+ E+ +G++ L P TY I + M+
Sbjct: 551 YNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY----------------EIIKEEMM 594
Query: 242 SRGFLP 247
+GFLP
Sbjct: 595 EKGFLP 600
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
Y L+ + LL L KE++ V KEM R +L T +I+ LC++ K ++A
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV------PRSME---LL 390
+DM G P+ +T+ L D + K G K ++ + P S+ L+
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLI 310
Query: 391 DSRCKD 396
D CKD
Sbjct: 311 DGFCKD 316
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 13/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIK L K ++F + W L+ + E P ++ + F++L+RR+A MV+ A+ +
Sbjct: 170 MIKTLGKMRQFGAVWALIEEM--RKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLD--- 224
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK A+ F +++ + P +R + LL GW
Sbjct: 225 --EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF---EDMRVRFNPNLRHFTSLLYGW 279
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ +++++ P++V Y L+ GY + ++ A L+ EM+K PNA
Sbjct: 280 CREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNA 339
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +I + + +E + +VTYT+L+ G+CK G+ + A +IL
Sbjct: 340 ASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDD 399
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G PS +Y K ++E+ M L +M + G PD Y+ +++++CK
Sbjct: 400 MIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGD 459
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHYLTF 357
L A+++ EM+ G + LDT +++H EA F++M+ RGL+ P Y T
Sbjct: 460 LKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTL 519
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
K L + + +A+ + + M++
Sbjct: 520 KELTNALLRAEKLEMAKNMWSCMTT 544
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 163/289 (56%), Gaps = 4/289 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK R++ A + K + + + P V Y +++ + +A +F E
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKM--VSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N+TPNVVTY L++G C+ RVD A+ L+ +MRK+ + P A+ YN++I GL +A R
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++E + P + TYT+L+ G+CK+ + A ++ + +++RGF P TY+
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYT-PDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G++++A++L+ +MI+SG P+ +TY+ L+ C+ K+D A+ + + M
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G D+ T T L++ C++ + D+A M R+GL P +TF L D
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 166/341 (48%), Gaps = 15/341 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K + A L + PD + + + R + EA + E AN
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR--LHEARKFLEEMAN 74
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+N + +L+D LCK GRV A K + + PT YN L++G
Sbjct: 75 -----RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR---KKCVPTAVTYNSLISGLC 126
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ +A EM P++ TY TL+ G+C+ ++ D A+R+ +++ G P+ +
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
Y+ +IDGL + GR +E + R + + G P VTY SL+ G+C+ G ++ A +L
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMI--KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M G P TY F K +++DA +L +M G TPD +T+ L+ LC+E
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
++L A+ + EM+ + C + T ++ CR + +EA
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 185/381 (48%), Gaps = 15/381 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ A+ LL + + +PD T+ LI + ++ + A+ FE
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIF---TYTTLITGFCKSKKSDDALRVFEQL- 176
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + F + L+D LCK+GR+K A + F + + S P YN L++G+
Sbjct: 177 ---VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK-SGSCMPNTVTYNSLISGFC 232
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + +A M + +P+VVTY TL+ G+C+L R+D A L+ +M ++G+ P+ +
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +++DGL R + ++ PT+ TY +++ GYC+A LE A K M+
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--ML 350
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
P+ ++N R K + +AM L + PD + Y ++ LC+E K+
Sbjct: 351 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 301 DLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A +V ++M + GC + T + LI LC D A E +G VP+ T+
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNL 466
Query: 360 LNDEFKKRGMTALAQKLCNVM 380
L D F+K A++L + M
Sbjct: 467 LIDAFRKANRDEDARELLDDM 487
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 8/301 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
S + Y L+ G + K ++ A F +M + P+V TY ++ C R+
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A + ++EM + PN + Y +IDGL + GR +E ++ + + PT VTY SL+
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLIS 123
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CKA A +L+ M+ G +P TY F K K +DA+ ++ +++ G+ P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183
Query: 283 DRLTYHILLKILCKEDKLDLAIQV-SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
D +TY L+ LCKE +L AI + + +K C + T LI CRM K DEA
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSRCK 395
E M G P +T+ L + F K A L N M+ V L+D C+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303
Query: 396 D 396
+
Sbjct: 304 E 304
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 18/282 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D A LL PD V T+ L+ + + ++ A ++ N
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVV---TYTTLMNGFCKLARLDDA---YDLLN 280
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F L+D LC++ R+ A + + +S +PTV YN +L+G+
Sbjct: 281 QMTR-KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR--KSCSPTVYTYNTILDGYC 337
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ +++A +F LE + + PNVV++ ++ G C++ R A+ LV+E R+ P+ +
Sbjct: 338 RANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
+Y TVIDGL + +E + + L EPG P +TY++L+ G C AG L+ A +
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLE-EPGCLPNSITYSTLITGLCNAGMLDRA----R 450
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
I +G +P+ TYN F K + EDA L M++ G+
Sbjct: 451 GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 163/289 (56%), Gaps = 4/289 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK R++ A + K + + + P V Y +++ + +A +F E
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKM--VSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N+TPNVVTY L++G C+ RVD A+ L+ +MRK+ + P A+ YN++I GL +A R
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++E + P + TYT+L+ G+CK+ + A ++ + +++RGF P TY+
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYT-PDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G++++A++L+ +MI+SG P+ +TY+ L+ C+ K+D A+ + + M
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G D+ T T L++ C++ + D+A M R+GL P +TF L D
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 166/341 (48%), Gaps = 15/341 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K + A L + PD + + + R + EA + E AN
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR--LHEARKFLEEMAN 74
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+N + +L+D LCK GRV A K + + PT YN L++G
Sbjct: 75 -----RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR---KKCVPTAVTYNSLISGLC 126
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ +A EM P++ TY TL+ G+C+ ++ D A+R+ +++ G P+ +
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
Y+ +IDGL + GR +E + R + + G P VTY SL+ G+C+ G ++ A +L
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMI--KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M G P TY F K +++DA +L +M G TPD +T+ L+ LC+E
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
++L A+ + EM+ + C + T ++ CR + +EA
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 185/381 (48%), Gaps = 15/381 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ A+ LL + + +PD T+ LI + ++ + A+ FE
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIF---TYTTLITGFCKSKKSDDALRVFEQL- 176
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + F + L+D LCK+GR+K A + F + + S P YN L++G+
Sbjct: 177 ---VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK-SGSCMPNTVTYNSLISGFC 232
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + +A M + +P+VVTY TL+ G+C+L R+D A L+ +M ++G+ P+ +
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +++DGL R + ++ PT+ TY +++ GYC+A LE A K M+
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--ML 350
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
P+ ++N R K + +AM L + PD + Y ++ LC+E K+
Sbjct: 351 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 301 DLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A +V ++M + GC + T + L+ LC D A E +G VP+ T+
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNL 466
Query: 360 LNDEFKKRGMTALAQKLCNVM 380
L D F+K A++L + M
Sbjct: 467 LIDAFRKANRDEDARELLDDM 487
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 139/293 (47%), Gaps = 8/293 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
Y L+ G + K ++ A F +M + P+V TY ++ C R+ A + ++EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ PN + Y +IDGL + GR +E ++ + + PT VTY SL+ G CKA
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A +L+ M+ G +P TY F K K +DA+ ++ +++ G+ PD +TY L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 291 LKILCKEDKLDLAIQV-SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ LCKE +L AI + + +K C + T LI CRM K DEA E M G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSRCKD 396
P +T+ L + F K A L N M+ V L+D C++
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 18/282 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D A LL PD V T+ L+ + + ++ A ++ N
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVV---TYTTLMNGFCKLARLDDA---YDLLN 280
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F L+D LC++ R+ A + + +S +PTV YN +L+G+
Sbjct: 281 QMTR-KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR--KSCSPTVYTYNTILDGYC 337
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ +++A +F LE + + PNVV++ ++ G C++ R A+ LV+E R+ P+ +
Sbjct: 338 RANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
+Y TVIDGL + +E + + L EPG P +TY++LV G C AG L+ A +
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLE-EPGCLPNSITYSTLVTGLCNAGMLDRA----R 450
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
I +G +P+ TYN F K + EDA L M++ G+
Sbjct: 451 GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ + + VTY +L++G C+++R+++A+ + +M +G P+ Y VI L R E
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+E P +VTYT L+ G CK G ++ A +L M + +P+ TYN
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISG 124
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K + +A +L +M+ SG PD TY L+ CK K D A++V +++ RG D
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T + LI LC+ + EA F MI+ G +P+ +T+ L F + G A L
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 378 NVMSSVPRSMELL 390
M+ S +++
Sbjct: 245 ERMAETGSSPDVV 257
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 13/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIK L K ++F + W L+ + E P ++ + F++L+RR+A MV+ A+ +
Sbjct: 147 MIKTLGKMRQFGAVWALIEEM--RKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLD--- 201
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK A+ F +++ + P +R + LL GW
Sbjct: 202 --EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF---EDMRVRFNPNLRHFTSLLYGW 256
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ +++++ P++V Y L+ GY + ++ A L+ EM+K PNA
Sbjct: 257 CREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNA 316
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +I + + +E + +VTYT+L+ G+CK G+ + A +IL
Sbjct: 317 ASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDD 376
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G PS +Y K ++E+ M L +M + G PD Y+ +++++CK
Sbjct: 377 MIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGD 436
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHYLTF 357
L A+++ EM+ G + LDT +++H EA F++M+ RGL+ P Y T
Sbjct: 437 LKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTL 496
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
K L + + +A+ + + M++
Sbjct: 497 KELTNALLRAEKLEMAKNMWSCMTT 521
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D CK V A F + + Q P V YNIL+NG V +A +
Sbjct: 231 YNILIDGFCKDENVSGAMRVFGEMQR--QGLRPNVVTYNILINGLCSDGKVDEAVALRDQ 288
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ PNVVT+ L+ G+C+ + V+ AI L +M K+G++PNA+ Y T+ID + GR
Sbjct: 289 MVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR 348
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ + + P + TY L+ G C+ GD++ A ++ M+S+ TYN
Sbjct: 349 MEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI 408
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+ A+ L +M E G P +TY+ L+ C+E L A+ V M+ +G
Sbjct: 409 LIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T +LI C + ++A+ +M+ RGLVP+ T++ + +E ++G
Sbjct: 469 KQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 156/299 (52%), Gaps = 9/299 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW--APTVRVYNILLNGWFRSKNVKD---AE 129
F I+++ LCK G++ A + K W +P V YN L++G+ + + A+
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMK----VWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + + PN VTY L++G+C+ V A+R+ EM+++G+ PN + YN +I+GL
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ +E + ++ + + P +VT+ L+ G+CK + A + M +G P+
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY + K G++EDA LY MI+ G P+ TY+ L+ LC++ + A + E
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M + D+ T +LI LC+ + +A ++M +GL P ++T+ L D + + G
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREG 452
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 153/292 (52%), Gaps = 9/292 (3%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N LL+G + D E + EM K + NV+++ +V G C++ +++RA ++++M+
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEV---SGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
G+ PN I YNT+IDG + GR ++ +++ + P VTY L+ G+CK +
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ GA ++ M +G P+ TYN GKV++A+ L +M+ S P+ +T+++
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV 303
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ CK ++ AI + +M+ +G D + T T LI C+ + ++A A + MI RG
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ P T+ L ++G A+ L N M S S + L+DS CK
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 20/346 (5%)
Query: 51 AAIWTFEFANNLDMVKNFDS----GASLFEILLDSLCK---QGRVKAASE---YFHKRKE 100
A + F NL +++ F++ G F++ L S C G VK + F R+
Sbjct: 88 ADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLIS-CNPLLSGLVKESENGDMEFVYREM 146
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
+ + V +NI++NG + + A +M+ V+PNV+TY TL++GYC++ R+
Sbjct: 147 IKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRI 206
Query: 161 DR---AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTM 214
+ A ++KEM +GI PN + YN +IDG + E VSG M F + P +
Sbjct: 207 GKMYKADAILKEMVAKGICPNEVTYNILIDGFCKD---ENVSGAMRVFGEMQRQGLRPNV 263
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ G C G ++ A + M+S P+ T+N F K V +A+NL+
Sbjct: 264 VTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFND 323
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G P+ +TY L+ CK+ +++ A + M RG ++ T LI LCR
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A + +M+ + L +T+ L D K+G + A KL + M
Sbjct: 384 VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 27/284 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + D A L + P+ V+ + +LI + + V AI F
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN---VLINGFCKNKTVNEAINLFN--- 322
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM K D A + L+D+ CK GR++ A ++ +D+ P V YN L+ G
Sbjct: 323 --DMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM--IDRGIFPEVSTYNCLIAGL 378
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R +VK A EM + ++ +VVTY L++ C+ +A++L+ EM ++G+ P+
Sbjct: 379 CRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSH 438
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT++DG G + R +VT+ L+KG+C G LE A+ +L
Sbjct: 439 VTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNE 498
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
M+ RG +P+ TTY + +M+E G+ PD
Sbjct: 499 MLERGLVPNRTTYEI----------------IKEEMMEKGFVPD 526
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F T+ LI R G V+AA N + K + + IL+DSLCK+G +
Sbjct: 365 FPEVSTYNCLIAGLCRKGDVKAARSLM----NEMVSKKLSADVVTYNILIDSLCKKGESR 420
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + + ++ P+ YN L++G+ R N++ A M ++ NVVT+
Sbjct: 421 KAVKLLDEM--FEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNV 478
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
L++G+C R++ A L+ EM + G+ PN Y + + ++E G ++ G
Sbjct: 479 LIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIEG 529
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 179/355 (50%), Gaps = 11/355 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +I + G V A+ E K + + + I++D LC+ G+
Sbjct: 8 PDVV---TYSTIISGLCKTGKVTEALEMVEEMTE----KGVNPDVATYTIIVDRLCRAGK 60
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A E FHK +++ + YN L+NG + +N++ A + EM + P+ +TY
Sbjct: 61 VDEADELFHKM--IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T++ G CR+ +V A + M G P+ + YN ++D L + G+ E G+ + +
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 208 CE--PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++TY +L+ G+C+ + A K+ K +I++G++P TYN ++ +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++A +++KM++SG P+ TY I+L C+ + +++ +EM + D+ +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I +LC+ K D+A E+M + G VP +T+ L D K + A +L + M
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 183/380 (48%), Gaps = 35/380 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFE----------------FANNLDMVKNFDSGASLFE-- 76
T+ I++ R RAG V+ A F N L +N + L E
Sbjct: 47 TYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 106
Query: 77 -------------ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+L LC+ G+V A ++F + ++P V YN LL+ ++
Sbjct: 107 ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPS--RGYSPDVVAYNGLLDALYKEG 164
Query: 124 NVKDAERFW--LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
V +A + ++M V P+++TY TL++G+CR+ + D A++L K++ +G P+ +
Sbjct: 165 KVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN+++ GL +E M ++ + P TY+ ++ G+C+ G++ ++ + M
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT 284
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+ F P N K KV+DA + +M + G PD +TY+ILL LCK + +D
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ M GC D+ + +++++ LC+ K +A F+ MI R LVP +TF L
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404
Query: 362 DEFKKRGMTALAQKLCNVMS 381
D K G A+ L +VMS
Sbjct: 405 DGLCKAGKLDEAKDLLDVMS 424
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 186/387 (48%), Gaps = 21/387 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + ++ D A L D I +PD V+ ++ ++ + R ++ M EA
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR--KSNMDEAE-------- 242
Query: 61 NLDMVKNF-DSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
+M K DSG + + I+L C+ G + E + + E + ++P V + N +
Sbjct: 243 --EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE--KRFSPDVLLCNAV 298
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++ ++K V DA + EM K P+VVTY L++G C+ VD+A L M G
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + Y+ V++GL + + + + +R + + P +VT+ L+ G CKAG L+ A
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L +M LP T + + ++A+ L++ M+E G D L ++I+L LC
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478
Query: 296 KEDKLDLAIQVSKEM-KCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+E KL A+ K M K G D+ T T L++ L + D+A F+ M G P
Sbjct: 479 REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVM 380
Y+ + L + +K+G A +L M
Sbjct: 539 YVAYNTLMNGLRKQGRHIQADRLTQAM 565
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 180/415 (43%), Gaps = 52/415 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + + A+ LL + PD ++ +T ++ R G V A F+
Sbjct: 86 LINGLCKDENIERAYKLLEEMASKGYEPDNITYNT---ILSGLCRMGKVSEAKQFFDSMP 142
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW- 119
+ + + + LLD+L K+G+V A F D+ AP + YN L++G+
Sbjct: 143 S----RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFC 198
Query: 120 ----------------------------------FRSKNVKDAERFWLEMRKENVTPNVV 145
R N+ +AE + +M PN
Sbjct: 199 RVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGA 258
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY ++ G+CR+ + R + L +EM ++ P+ ++ N VID L +A + ++ ++E
Sbjct: 259 TYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P +VTY L+ G CK ++ A ++ M+ G P +Y+ K KV
Sbjct: 319 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA L+ +MIE PD +T++IL+ LCK KLD A + M D T T L
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTL 438
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLV----PHYLTFKRLNDEFKKRGMTALAQKL 376
+H LCR + DEA F+ M+ +G V PH + L E K LAQ L
Sbjct: 439 MHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK------LAQAL 487
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 10/338 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K F+ + ++ LCK G+V A E + E + P V Y I+++ R+ V
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTE--KGVNPDVATYTIIVDRLCRAGKV 61
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A+ + +M + + N V Y L+ G C+ ++RA +L++EM +G EP+ I YNT+
Sbjct: 62 DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM--ISR 243
+ GL G+ E + P +V Y L+ K G + A + K M R
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
P TYN F + K ++AM L++ +I GY PD +TY+ +L L ++ +D A
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ K+M GC + T ++++ CR+ +E+M + P L + D
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301
Query: 364 FKKRGMTALAQKLCNVMS---SVPRSME---LLDSRCK 395
K A K+ MS +VP + LLD CK
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 122/228 (53%), Gaps = 2/228 (0%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P+VVTY T++ G C+ +V A+ +V+EM ++G+ P+ Y ++D L AG+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + V Y +L+ G CK ++E A K+L+ M S+G+ P TYN
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK--EMKC 312
+ GKV +A + M GY+PD + Y+ LL L KE K+ A + K +M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
R DL T LI CR+ K DEA F+D+I +G +P +T+ +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSI 228
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 2/258 (0%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
++ + P V Y+ +++G ++ V +A EM ++ V P+V TY +V+ CR +VD
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A L +M + G N + YN +I+GL + E ++E P +TY +++
Sbjct: 63 EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK--MIESG 279
G C+ G + A + M SRG+ P YN K GKV +A L++ M +
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD +TY+ L+ C+ +K D A+++ K++ +G D T ++ L R DEA
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 340 AEFEDMIRRGLVPHYLTF 357
F+ M+ G P+ T+
Sbjct: 243 EMFKKMVDSGCAPNGATY 260
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 15/287 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I +L KAK+ D A +L + KIG VPD V T+ IL+ + +V+ A F
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGA--VPDVV---TYNILLDGLCKTNLVDKAHELFST 352
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + S + ++L+ LCK +V A F + +++ P V +NIL++G
Sbjct: 353 MVDNGCAPDIVS----YSVVLNGLCKTNKVHDARVLFDRM--IERKLVPDVVTFNILMDG 406
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++ + +A+ M + NV P+ VT TL+ G CR +R D A+RL + M ++G +
Sbjct: 407 LCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVC--EPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+ +N V+ GL G+ + + + E P +VTYT+LV +AG ++ A
Sbjct: 467 VLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDY 526
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ M G P YN K G+ A L + M E G+ D
Sbjct: 527 FQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 4/242 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILLD LCK V A E F +D AP + Y+++LNG ++ V DA +
Sbjct: 330 YNILLDGLCKTNLVDKAHELFSTM--VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+VVT+ L++G C+ ++D A L+ M + + P+ + T++ GL R
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI-SRG-FLPSPTTY 252
+E + + + ++ + ++ G C+ G L A K M+ S G F P TY
Sbjct: 448 TDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTY 507
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ G+V+ A++ +++M SG PD + Y+ L+ L K+ + A ++++ MK
Sbjct: 508 TTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567
Query: 313 RG 314
+G
Sbjct: 568 KG 569
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 189/376 (50%), Gaps = 9/376 (2%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LL D I VPD V T+ LI G VE A+ F A D+ + ++
Sbjct: 241 LLKDAIFKGFVPDRV---TYCSLINGLCAEGDVERALELFNEAQAKDLKPDL----VVYN 293
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ LC+QG + A + ++ E P + YNI++NG + N+ DA +
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVE--DGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ P+V T+ T+++GYC+ ++D A++LV+ M GI P+AI YN+V++GL +AG+ +
Sbjct: 352 VKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
EV+ E ++ P +TY L++ +CK LE AS ++ M G +P ++N
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
F + G ++ A L++K+ E GY+ T++IL+ + + +A ++ EM +G
Sbjct: 472 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 531
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DL T +L+ C+ D A +M+ +G VP TF R+ + + A +
Sbjct: 532 PDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAI 591
Query: 377 CNVMSSVPRSMELLDS 392
++M + E++D+
Sbjct: 592 IHIMVRMGVVPEVVDT 607
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 164/338 (48%), Gaps = 7/338 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
V+K T I IR G +E A+ E M + L+ LCK +V+
Sbjct: 148 VNKFTCNIWIRGLCEGGRLEEAVALVE-----SMDAYIAPDVVTYNTLMRGLCKDSKVQE 202
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A++Y R+ ++Q P YN +++G+ + +++A + + P+ VTY +L
Sbjct: 203 AAQYL--RRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSL 260
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G C V+RA+ L E + + ++P+ +VYN+++ GL G +M +
Sbjct: 261 INGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGC 320
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + TY ++ G CK G++ A+ ++ I +G+LP T+N + K K++ A+
Sbjct: 321 HPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQ 380
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M G PD +TY+ +L LCK K + +EM +GC + T +LI C
Sbjct: 381 LVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 440
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ + +EAS M + GLVP ++F L F + G
Sbjct: 441 KINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNG 478
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 145/331 (43%), Gaps = 38/331 (11%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + + S C GR A E P Y ++ G + + DA
Sbjct: 45 ARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLA--YCTVVRGLYAHGHGYDARHL 102
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM + +V P+V T+ ++ C+ + + L+ ++ K G+ N N I GL E
Sbjct: 103 FDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCE 162
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR EE ++E + P +VTY +L++G CK ++ A++ L+ M+++G +P T
Sbjct: 163 GGRLEEAVALVES-MDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED------------- 298
YN + K +++A L + I G+ PDR+TY L+ LC E
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 299 ----KLDL------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
K DL A+QV EM GC D+ T ++I+ LC+M
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+A+ D I +G +P TF + D + KR
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKR 372
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P YN +++ + A + ++ M V P+ T+ ++ +C R A+RL
Sbjct: 8 PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++ + + G + + Y TV+ GL G + + + L + P + T+ +++ C+
Sbjct: 68 LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD+ + +L ++ RG + T N + R + G++E+A+ L M ++ PD +T
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVT 186
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L++ LCK+ K+ A Q + M +GC D T +I C+ EA+ +D I
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+G VP +T+ L + G A +L N
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFN 278
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 96/238 (40%), Gaps = 36/238 (15%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G P A YN ++D LV ++ + R L P T+T +K +C G A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
++L+ + RG P Y R G DA +L+ +M+ PD T++ +L
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 294 LC-KEDKLDLAIQVSKEMKCRG-------CDI---------------------------D 318
LC K D ++ ++K +K RG C+I D
Sbjct: 125 LCQKGDIMESGALLAKVLK-RGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPD 183
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T L+ LC+ K EA+ M+ +G +P T+ + D + KR M A +L
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 182/357 (50%), Gaps = 9/357 (2%)
Query: 20 DKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILL 79
D G P+ V+ +T L+ + RAG V+AA + + + F ++
Sbjct: 180 DMRGAGCAPNVVTYNT---LVAAFCRAGEVDAAERLVGVMREGGVRPSLVT----FNTVV 232
Query: 80 DSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
+ LCK GR++ A + F + + P YN L++G+ ++ + +A + EM ++
Sbjct: 233 NGLCKAGRMEDARKMFDEMAR--EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
V P+VVT+ +L+ CR ++RA+ LV +MR+ G+ N + +IDG G ++
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
M+ C P++V Y L+ GYCK G ++ A +++ M ++G P TY+ +
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K G + A L RKM++ G PD +TY L++ LC+E +L A ++ ++M G D
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T T LI C+ +A + ++MI++G++P +T+ L D K T AQ+L
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 175/381 (45%), Gaps = 27/381 (7%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V TF LI RAG +E A+ + N + F L+D C+ G
Sbjct: 292 VPDVV---TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT----FTALIDGFCRNG 344
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + +E P+V YN+L+NG+ + + +A EM + + P+VVT
Sbjct: 345 FLDDALLAMKEMREC--RIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVT 402
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ GYC++ D A L ++M K+G+ P+AI Y+++I GL E R + + E+ L
Sbjct: 403 YSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKML 462
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYT+L+ G+CK G+++ A + MI +G LP TY+ SK + +
Sbjct: 463 QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTK 522
Query: 267 DAMNLYRKMIESGYTPDRLTYH---------------ILLKILCKEDKLDLAIQVSKEMK 311
+A L K+ PD + Y LLK + ++ A +V + M
Sbjct: 523 EAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSML 582
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
R +D ++LIH CR +A + + ++R G P+ + L + GMT
Sbjct: 583 DRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTV 642
Query: 372 LAQKLCNVMSSVPRSMELLDS 392
A NV+ + L D+
Sbjct: 643 EAD---NVIQELLNCCSLADA 660
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+AP++ YN +L ++ A R M ++ V PNV TY LV C + + A
Sbjct: 115 GYAPSLLAYNAVLLA-LSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 164 IRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRF---EEVSGMMERFLVCEPG--PTMVTY 217
+ +V +MR G PN + YNT++ AG E + G+M E G P++VT+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMR-----EGGVRPSLVTF 228
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
++V G CKAG +E A K+ M G P +YN + K G + +A+ ++ +M +
Sbjct: 229 NTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ 288
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G PD +T+ L+ +C+ L+ A+ + +M+ RG ++ T T LI CR D+
Sbjct: 289 KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDD 348
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
A ++M + P + + L + + K G A++L + M +
Sbjct: 349 ALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEA 393
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 11/242 (4%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME---RFLVCEPGPTMVTYTS 219
A RL+ M ++G+ PN YN ++ L G+ EE G++ R C P +VTY +
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGC--APNVVTYNT 195
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
LV +C+AG+++ A +++ +M G PS T+N K G++EDA ++ +M G
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
TPD ++Y+ L+ CK L A+ V EM +G D+ T T LIH +CR + A
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAV 315
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGM---TALAQK---LCNVMSSVPRSMELLDSR 393
A M RGL + TF L D F + G LA K C + SV L++
Sbjct: 316 ALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGY 375
Query: 394 CK 395
CK
Sbjct: 376 CK 377
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 187/380 (49%), Gaps = 17/380 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L+ D + +SK+TF ++ RRYARA V+ AI F
Sbjct: 134 LIESLGKIKQFKLIWSLVDD----MKAKKLLSKETFALISRRYARARKVKEAIGAFHKME 189
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F +S F +LD+L K V A + F K K+ + + P ++ Y ILL GW
Sbjct: 190 EF----GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK--KRFEPDIKSYTILLEGWG 243
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ + EM+ E P+VV YG ++ +C+ ++ + AIR EM + +P+
Sbjct: 244 QELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ ++I+GL + + ER TY +LV YC + +E A K + M
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY+ + + + ++A +Y+ M P TY I++++ C +++L
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERL 420
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+AI++ EMK +G + + LI LC K DEA F +M+ G+ P F RL
Sbjct: 421 DMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Query: 361 N----DEFKKRGMTALAQKL 376
DE +K +T L K+
Sbjct: 481 KQTLLDEGRKDKVTDLVVKM 500
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 4/312 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+L E +L L G V A S + K E + + T YN L+ + K K
Sbjct: 95 ALIEEVLKKLSNAG-VLALSVF--KWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLV 151
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M+ + + T+ + Y R R+V AI +M + G + + +N ++D L ++
Sbjct: 152 DDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS 210
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ + ++ P + +YT L++G+ + +L ++ + M GF P Y
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 270
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
K K E+A+ + +M + P + L+ L E KL+ A++ + K
Sbjct: 271 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 330
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
G ++ T L+ C + ++A ++M +G+ P+ T+ + + +
Sbjct: 331 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 373 AQKLCNVMSSVP 384
A ++ MS P
Sbjct: 391 AYEVYQTMSCEP 402
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 186/363 (51%), Gaps = 18/363 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ AK +++ W D I ++ +TF I++R+YARA V+ AI+ F
Sbjct: 104 MIESTAKIRQYKLMW----DLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME 159
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ N + F LL +LCK V+ A E F ++ + P + Y+ILL GW
Sbjct: 160 KYDLPPNLVA----FNGLLSALCKSKNVRKAQEVFENMRD---RFTPDSKTYSILLEGWG 212
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ A + EM P++VTY +V+ C+ RVD A+ +V+ M +P
Sbjct: 213 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 272
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R EE ++ FL E + + SL+ +CKA ++ ++L
Sbjct: 273 IYSVLVHTYGTENRLEEA---VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 329
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M S+G P+ + N R+ + G+ ++A +++RKMI+ PD TY +++K+ C++
Sbjct: 330 KEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEK 388
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+++ A +V K M+ +G + T ++LI+ LC +A E+MI G+ P +TF
Sbjct: 389 KEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 448
Query: 358 KRL 360
RL
Sbjct: 449 GRL 451
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 7/230 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ I++D LCK GRV E + +D S PT +Y++L++ + +++A +L
Sbjct: 239 YSIMVDILCKAGRV---DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFL 295
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + +V + +L+ +C+ R+ R++KEM+ +G+ PN+ N ++ L+E G
Sbjct: 296 EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 355
Query: 194 RFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+E + + + VCEP TYT ++K +C+ ++E A K+ K M +G PS T+
Sbjct: 356 EKDEAFDVFRKMIKVCEPDAD--TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 413
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ + + A L +MIE G P +T+ L ++L KE++ D+
Sbjct: 414 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDV 463
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + E + + +VR Y++++ + + K MRK+ + NV T+ ++ Y
Sbjct: 84 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKY 142
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG---RFEEV-SGMMERFLVCEP 210
R ++VD AI M K + PN + +N ++ L ++ + +EV M +RF
Sbjct: 143 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF----- 197
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TY+ L++G+ K +L A ++ + MI G P TY+ K G+V++A+
Sbjct: 198 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 257
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ R M S P Y +L+ E++L+ A+ EM+ G D+ LI C
Sbjct: 258 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 317
Query: 331 RMYKFDEASAEFEDMIRRGLVPH 353
+ + ++M +G+ P+
Sbjct: 318 KANRMKNVYRVLKEMKSKGVTPN 340
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 51/249 (20%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTF 56
M+ +L KA D A ++ +D P TF+ +L+ Y +E A+ TF
Sbjct: 242 MVDILCKAGRVDEALGIVRSMD-------PSICKPTTFIYSVLVHTYGTENRLEEAVDTF 294
Query: 57 EFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE---------------------- 93
L+M ++ + ++F L+ + CK R+K
Sbjct: 295 -----LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 349
Query: 94 YFHKRKELDQSW----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ +R E D+++ P Y +++ + K ++ A++ W MRK+ V P+
Sbjct: 350 HLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 409
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+ T+ L+ G C R +A L++EM + GI P+ + + + L++ R + + + E
Sbjct: 410 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 469
Query: 204 RF--LVCEP 210
+ LV EP
Sbjct: 470 KMNVLVNEP 478
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 186/363 (51%), Gaps = 18/363 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ AK +++ W D I ++ +TF I++R+YARA V+ AI+ F
Sbjct: 140 MIESTAKIRQYKLMW----DLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ N + F LL +LCK V+ A E F ++ + P + Y+ILL GW
Sbjct: 196 KYDLPPNLVA----FNGLLSALCKSKNVRKAQEVFENMRD---RFTPDSKTYSILLEGWG 248
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ A + EM P++VTY +V+ C+ RVD A+ +V+ M +P
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R EE ++ FL E + + SL+ +CKA ++ ++L
Sbjct: 309 IYSVLVHTYGTENRLEEA---VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M S+G P+ + N R+ + G+ ++A +++RKMI+ PD TY +++K+ C++
Sbjct: 366 KEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEK 424
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+++ A +V K M+ +G + T ++LI+ LC +A E+MI G+ P +TF
Sbjct: 425 KEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Query: 358 KRL 360
RL
Sbjct: 485 GRL 487
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 7/230 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ I++D LCK GRV E + +D S PT +Y++L++ + +++A +L
Sbjct: 275 YSIMVDILCKAGRV---DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFL 331
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + +V + +L+ +C+ R+ R++KEM+ +G+ PN+ N ++ L+E G
Sbjct: 332 EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
Query: 194 RFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+E + + + VCEP TYT ++K +C+ ++E A K+ K M +G PS T+
Sbjct: 392 EKDEAFDVFRKMIKVCEPDAD--TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ + + A L +MIE G P +T+ L ++L KE++ D+
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDV 499
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + E + + +VR Y++++ + + K MRK+ + NV T+ ++ Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKY 178
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF----EEVSGMMERFLVCEP 210
R ++VD AI M K + PN + +N ++ L ++ E M +RF
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF----- 233
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TY+ L++G+ K +L A ++ + MI G P TY+ K G+V++A+
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ R M S P Y +L+ E++L+ A+ EM+ G D+ LI C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 331 RMYKFDEASAEFEDMIRRGLVPH 353
+ + ++M +G+ P+
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPN 376
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 51/249 (20%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTF 56
M+ +L KA D A ++ +D P TF+ +L+ Y +E A+ TF
Sbjct: 278 MVDILCKAGRVDEALGIVRSMD-------PSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 57 EFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE---------------------- 93
L+M ++ + ++F L+ + CK R+K
Sbjct: 331 -----LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 94 YFHKRKELDQSW----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ +R E D+++ P Y +++ + K ++ A++ W MRK+ V P+
Sbjct: 386 HLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+ T+ L+ G C R +A L++EM + GI P+ + + + L++ R + + + E
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 505
Query: 204 RF--LVCEP 210
+ LV EP
Sbjct: 506 KMNVLVNEP 514
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 189/376 (50%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L + +SKDTF +++RRYARA V+ A+ TFE +
Sbjct: 167 LIEALGKIKQFRLVWSL----VETMRCRGLLSKDTFKLIVRRYARARKVKEAVETFEKMS 222
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + S + L+D+L K +VK A + + K + + P ++ Y +L+ GW
Sbjct: 223 ----IFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGK-FVPDLKTYTVLMEGWG 277
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K++ + + EM + P+VV YG L+ +C+ + D AI++ EM G P+
Sbjct: 278 HEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPH 337
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VY +I+GL R +E E + + T ++V YC+A + A K++ M
Sbjct: 338 VYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEM 397
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
P+ TY+ Y K K E+A N++++M G P TY +++ + C ++
Sbjct: 398 RKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRV 457
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A++V K+M +G + + LI+ LC + +EA F++M+ +G+ P F L
Sbjct: 458 DMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNL 517
Query: 361 NDEFKKRGMTALAQKL 376
+ + G +LAQ++
Sbjct: 518 KEALVQGGRISLAQEV 533
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 150/318 (47%), Gaps = 30/318 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L+K+K+ A + + K G VPD T+ +L+ W E
Sbjct: 236 LIDTLSKSKQVKKAQAIYKEMKRKGKFVPDL---KTYTVLMEG-----------WGHE-- 279
Query: 60 NNLDMVKN-----FDSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTV 109
+L MVK D+G + +L+ + CK G+ A + F+ E++ S P+
Sbjct: 280 KDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFY---EMEASGCMPSP 336
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
VY +L+NG + + +A +++ +K V T +V YCR + A ++V E
Sbjct: 337 HVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDE 396
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
MRK + PN+ Y+ ++ L+++ +FEE + +R + P + TYT +V +C G
Sbjct: 397 MRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGR 456
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
++ A K+ K M +G LP ++ ++E+A +++M++ G P +
Sbjct: 457 VDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSN 516
Query: 290 LLKILCKEDKLDLAIQVS 307
L + L + ++ LA +V+
Sbjct: 517 LKEALVQGGRISLAQEVA 534
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 183/376 (48%), Gaps = 10/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K K+FD W L+ + EV +S T ++RR A A AI F +
Sbjct: 172 MVDILGKFKQFDLMWGLINQMV---EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 228
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+VK+ +LLD+LCK+ VK A F +EL + P +N L++GW
Sbjct: 229 RFGVVKD----TKAMNVLLDTLCKERSVKRARGVF---QELRGTIPPDENSFNTLVHGWC 281
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ +K+A EM++ +P+VVTY +LVE YC + L+ EMRK PN +
Sbjct: 282 KARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVV 341
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ L +AGR E ++ P Y SL+ +AG LE A +++ M
Sbjct: 342 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 401
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P+ TT+N + E+A+ L KM E PD TY LLK+ CK +
Sbjct: 402 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 461
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + + M + D T T+L+ LCR K ++ E+M+ +G P TF +
Sbjct: 462 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLV 521
Query: 361 NDEFKKRGMTALAQKL 376
++ +KR + ++ +K+
Sbjct: 522 MEKLEKRNLQSVYKKI 537
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 184/355 (51%), Gaps = 11/355 (3%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
V+ +T +RR+ AG A+ F+ L + KN +S +LLD+LCK+ V+
Sbjct: 140 LVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQALGLEKNTES----MNLLLDTLCKEKFVQ 195
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E F EL Q AP +NI ++GW + V +A EM+ P V++Y T
Sbjct: 196 QAREIF---LELKQHIAPNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYST 252
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++ YC+ R L+ EM+ +G N I Y +++ L +A +FEE + ER
Sbjct: 253 LIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSG 312
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKM-MISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + + SL+ +AG L+ A+ + K+ M G P+ +TYN F + + A
Sbjct: 313 CRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRA 372
Query: 269 MNLYRKMIES-GYTPDRLTYHILLKILCKEDKLD--LAIQVSKEMKCRGCDIDLDTSTML 325
+ + ++M S G PD TYH L+K + K+D L+ ++ + + +DL T T+L
Sbjct: 373 LEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLL 432
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
IH LCR + + A + FE+MI + ++P Y T + L DE K++ M A+K+ ++M
Sbjct: 433 IHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIEDLM 487
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 178/357 (49%), Gaps = 17/357 (4%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF---------------EILLDSLC 83
L ++ +G+ + + + L M +FD LF +++D+ C
Sbjct: 32 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 91
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+G ++ A + +K ++ P V YN +++G +S V++A + EM + TPN
Sbjct: 92 KRGMLEEACDLI--KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 149
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
++ T++ G C+ ++D+A ++ EM + I P++ Y +IDGL +AG+ E + +
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQ 209
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R L P+ VTY ++ G C A L+ A ++ K M S+G PS T+N K G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K+++A L ++M + G+ PD +TY L+ LC ++D A + ++M R C + T
Sbjct: 270 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LIH LC+ + EA + M+ G P +T+ L + G T A++L + M
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 156/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L K G++ A + F + LD P+ YN++++G + + +A +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRM--LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P+ T+ L++ +C+ ++D A RL+K M +G P+ + Y+T+I GL R
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++E + + PT+VT +L+ G CKAG ++ A ++L M+S G P TYN
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G+ E A L M+ G P+ +TY L+ LCK ++L A V +MK G
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C +L T T LI C + D F +M+ G+ P ++ + L E K G +A A
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485
Query: 375 KL 376
++
Sbjct: 486 EI 487
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 177/379 (46%), Gaps = 15/379 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI K + A L+ I VPD V+ +T + + + +R VE A+ F
Sbjct: 86 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR---VEEALLLFNEME 142
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD---QSWAPTVRVYNILLN 117
L N S ++ LC+Q ++ A + FH+ + D SW+ Y IL++
Sbjct: 143 RLGCTPNRRS----HNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS-----YGILID 193
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G ++ + +A + + M +TP+ VTY ++ G C +D A+ L K MR +G P
Sbjct: 194 GLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ +N +ID + G+ +E +++R P +VTY++L+ G C ++ A +L
Sbjct: 254 SRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 313
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M+ R P+ T N K G++++A + M+ SG +PD +TY+ L+ C+
Sbjct: 314 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ + A ++ +M RG ++ T T L+ LC+ + EA F M G P+ T+
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433
Query: 358 KRLNDEFKKRGMTALAQKL 376
L F G KL
Sbjct: 434 TALILGFCSAGQVDGGLKL 452
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 150/289 (51%), Gaps = 8/289 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L K G++ A F K L P+ Y L++G + + DA + +
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKL--LHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ VTY +++ C+ ++ A L+K+M ++G P+ + YNTV+DGL ++ R
Sbjct: 71 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 130
Query: 195 FEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
EE + MER L C P ++ +++ G C+ ++ A ++ M ++ P +
Sbjct: 131 VEEALLLFNEMER-LGCT--PNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y +K GK+ +A L+++M++SG TP +TY++++ +C LD A+++ K M+
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+GC T +LI C+ K DEA + M G VP +T+ L
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 172/366 (46%), Gaps = 16/366 (4%)
Query: 31 VSKDT--FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCK 84
VS D+ + ILI A+AG + A F+ K SG + + L+ LC
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQ--------KLLHSGVTPSTVAYTSLIHGLCM 57
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
A E F + P+ YN++++ + +++A +M ++ P+V
Sbjct: 58 ANSFDDARELFADMNR--RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDV 115
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
VTY T+++G C+ RV+ A+ L EM + G PN +NT+I GL + + ++ +
Sbjct: 116 VTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE 175
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P +Y L+ G KAG L A K+ + M+ G PS TYN
Sbjct: 176 MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+++A+ L++ M G P R T++IL+ CK KLD A ++ K M G D+ T +
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
LI LC + + D+A EDM++R P +T L K G A+++ + M S
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 385 RSMELL 390
+S +++
Sbjct: 356 QSPDVV 361
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 9/309 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I LAKA + + A+ L + P V T+ ++I A ++ A+ F+
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAV---TYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F IL+D+ CK+G++ A ++ D P V Y+ L++G
Sbjct: 248 S----KGCRPSRFTFNILIDAHCKRGKLDEAFRLL--KRMTDDGHVPDVVTYSTLISGLC 301
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V DA +M K P VVT TL+ G C+ R+ A ++ M G P+ +
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++ G AG+ E ++ + P +VTYT+LV G CKA L A + M
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G P+ TY F G+V+ + L+ +M+ +G +PD + Y L LCK +
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481
Query: 301 DLAIQVSKE 309
A+++ +E
Sbjct: 482 ARALEILRE 490
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 128/267 (47%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+++ +P Y IL++G ++ + DA + ++ VTP+ V Y +L+ G C D
Sbjct: 3 ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A L +M + G P+ + YN +ID + G EE ++++ + P +VTY +++
Sbjct: 63 DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G CK+ +E A + M G P+ ++N + K++ A ++ +M
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +Y IL+ L K KL+ A ++ + M G T ++IH +C Y DEA
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRG 368
F+ M +G P TF L D KRG
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRG 269
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 108/207 (52%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M + + P++ Y +IDGL +AG+ + + ++ L P+ V YTSL+ G C A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A ++ M RG PSP TYN K G +E+A +L +KMIE G+ PD +TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ LCK +++ A+ + EM+ GC + + +I LC+ K D+A F +M +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ P ++ L D K G A KL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKL 207
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + NV+P+ +YG L++G + +++ A L +++ G+ P+ + Y ++I GL A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 195 FEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
F++ + M R C P P VTY ++ CK G LE A ++K MI G +P
Sbjct: 61 FDDARELFADMNRRG--CPPSP--VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K +VE+A+ L+ +M G TP+R +++ ++ LC++ K+D A QV EM
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ + D + +LI L + K +EA F+ M+ G+ P +T+
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN 224
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 128/316 (40%), Gaps = 43/316 (13%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S+ TF ILI + + G ++ A + + V + + + L+ LC RV A
Sbjct: 254 SRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVT----YSTLISGLCSIARVDDA 309
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ + PTV N L++G ++ +K+A M +P+VVTY TLV
Sbjct: 310 RHLLEDM--VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G+CR + +RA L+ +M G+ PN + Y ++ GL +A R E G+ +
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK---------- 261
P + TYT+L+ G+C AG ++G K+ M+ G P Y K
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487
Query: 262 ---------------------------FGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
GK+E A+ R M+ G P L+ L
Sbjct: 488 LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547
Query: 295 CKEDKLDLAIQVSKEM 310
CK + A V +E+
Sbjct: 548 CKSGQGGEARAVLEEI 563
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 125/321 (38%), Gaps = 54/321 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + D A+ LL VPD V+ T + + AR V+ A E
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR---VDDARHLLE--- 314
Query: 61 NLDMVKNFDSGASLFE-ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DMVK + + L+ LCK GR+K A E QS P V YN L++G
Sbjct: 315 --DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS--PDVVTYNTLVHGH 370
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R+ + A +M + PNVVTY LV G C+ R+ A + +M+ G PN
Sbjct: 371 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 430
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERF--LVCEP-GPTMVTYTSLVKGYCK---------- 226
Y +I G AG +V G ++ F +VC P V Y +L CK
Sbjct: 431 FTYTALILGFCSAG---QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487
Query: 227 ---------------------------AGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
AG +E A ++ M+ G LP+P
Sbjct: 488 LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547
Query: 260 SKFGKVEDAMNLYRKMIESGY 280
K G+ +A + ++++ Y
Sbjct: 548 CKSGQGGEARAVLEEIMDLAY 568
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 17/275 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA A +L + + PD V+ +T L+ + RAG E A
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT---LVHGHCRAGQTERARELLS--- 384
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DMV + + L+ LCK R+ A F + K AP + Y L+ G+
Sbjct: 385 --DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS--SGCAPNLFTYTALILGF 440
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V + + EM ++P+ V YGTL C+ R RA+ +++E R E + A
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR-ESLRSEA 499
Query: 180 I---VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
VY +DGL+EAG+ E G + + P SLV G CK+G A +
Sbjct: 500 WGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 559
Query: 237 LK--MMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
L+ M ++ G + K ++EDA+
Sbjct: 560 LEEIMDLAYGGKARGKAAKFVEEMVGKGYEIEDAV 594
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 183/376 (48%), Gaps = 10/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K K+FD W L+ + EV +S T ++RR A A AI F +
Sbjct: 231 MVDILGKFKQFDLMWGLINQMV---EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 287
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+VK+ +LLD+LCK+ VK A F +EL + P +N L++GW
Sbjct: 288 RFGVVKD----TKAMNVLLDTLCKERSVKRARGVF---QELRGTIPPDENSFNTLVHGWC 340
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ +K+A EM++ +P+VVTY +LVE YC + L+ EMRK PN +
Sbjct: 341 KARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVV 400
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ L +AGR E ++ P Y SL+ +AG LE A +++ M
Sbjct: 401 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 460
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P+ TT+N + E+A+ L KM E PD TY LLK+ CK +
Sbjct: 461 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 520
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + + M + D T T+L+ LCR K ++ E+M+ +G P TF +
Sbjct: 521 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLV 580
Query: 361 NDEFKKRGMTALAQKL 376
++ +KR + ++ +K+
Sbjct: 581 MEKLEKRNLQSVYKKI 596
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L K G++ A + F R+ LD P+ YN++++G + + +A +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLF--RRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P+ T+ L++ +C+ ++D A RL+K M +G P+ + Y+T+I GL R
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++E + + PT+VT +L+ G CKAG ++ A ++L M+S G P TYN
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G+ E A L M+ G P+ +TY L+ LCK ++L A V +MK G
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C +L T T LI C + D F +M+ G+ P ++ + L E K G +A A
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485
Query: 375 KL 376
++
Sbjct: 486 EI 487
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 176/357 (49%), Gaps = 17/357 (4%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF---------------EILLDSLC 83
L ++ +G+ + + + L M +FD LF +++D+ C
Sbjct: 32 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASC 91
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+G ++ A + +K ++ P V YN +++G +S V++A + EM + TPN
Sbjct: 92 KRGMLEEACDLI--KKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPN 149
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
++ T++ G C+ ++D+A ++ EM I P++ Y +IDGL +AG+ E +
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R L P+ VTY ++ G C A L+ A ++ K M S+G PS T+N K G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K+++A L ++M + G+ PD +TY L+ LC ++D A + ++M R C + T
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LIH LC+ + EA + M+ G P +T+ L + G T A++L + M
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 171/356 (48%), Gaps = 16/356 (4%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
GH VPD V+ +T ++ ++G VE A+ F L N S ++ LC
Sbjct: 110 GH-VPDVVTYNT---VMDGLCKSGRVEEALLLFNEMERLGCTPNRRS----HNTIILGLC 161
Query: 84 KQGRVKAASEYFHKRKELD---QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
+Q ++ A + FH+ + D SW+ Y IL++G ++ + +A + + M +
Sbjct: 162 QQSKIDQACQVFHEMEARDIPPDSWS-----YGILIDGLAKAGKLNEAYKLFRRMLDSGI 216
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
TP+ VTY ++ G C +D A+ L K MR +G P+ +N +ID + G+ +E
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFR 276
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+++R P +VTY++L+ G C ++ A +L+ M+ R P+ T N
Sbjct: 277 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G++++A + M+ SG +PD +TY+ L+ C+ + + A ++ +M RG ++
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T T L+ LC+ + EA F M G P+ T+ L F G KL
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 452
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 152/289 (52%), Gaps = 8/289 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L K G++ A + F K L P+ Y L++G + + DA + +
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKL--LHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ VTY +++ C+ ++ A L+K+M ++G P+ + YNTV+DGL ++GR
Sbjct: 71 MNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGR 130
Query: 195 FEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
EE + MER L C P ++ +++ G C+ ++ A ++ M +R P +
Sbjct: 131 VEEALLLFNEMER-LGCT--PNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y +K GK+ +A L+R+M++SG TP +TY++++ +C LD A+++ K M+
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+GC T +LI C+ K DEA + M G VP +T+ L
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 16/366 (4%)
Query: 31 VSKDT--FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCK 84
VS D+ + ILI A+AG + A F+ K SG + + L+ LC
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQ--------KLLHSGVTPSTVAYTSLIHGLCM 57
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
A E F + P+ YN++++ + +++A +M ++ P+V
Sbjct: 58 ANSFDDARELFADMNR--RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDV 115
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
VTY T+++G C+ RV+ A+ L EM + G PN +NT+I GL + + ++ +
Sbjct: 116 VTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE 175
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P +Y L+ G KAG L A K+ + M+ G PS TYN
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+++A+ L++ M G P R T++IL+ CK K+D A ++ K M G D+ T +
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
LI LC + + D+A EDM++R P +T L K G A+++ + M S
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 385 RSMELL 390
+S +++
Sbjct: 356 QSPDVV 361
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 9/309 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I LAKA + + A+ L + P V T+ ++I A ++ A+ F+
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAV---TYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F IL+D+ CK+G++ A ++ D P V Y+ L++G
Sbjct: 248 S----KGCRPSRFTFNILIDAHCKRGKMDEAFRLL--KRMTDDGHVPDVVTYSTLISGLC 301
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V DA +M K P VVT TL+ G C+ R+ A ++ M G P+ +
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++ G AG+ E ++ + P +VTYT+LV G CKA L A + M
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G P+ TY F G+V+ + L+ +M+ +G +PD + Y L LCK +
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481
Query: 301 DLAIQVSKE 309
A+++ +E
Sbjct: 482 ARALEILRE 490
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+++ +P Y IL++G ++ + DA + ++ VTP+ V Y +L+ G C D
Sbjct: 3 ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A L +M + G P+ + YN +ID + G EE ++++ + P +VTY +++
Sbjct: 63 DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G CK+G +E A + M G P+ ++N + K++ A ++ +M
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +Y IL+ L K KL+ A ++ + M G T ++IH +C Y DEA
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRG 368
F+ M +G P TF L D KRG
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRG 269
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + NV+P+ +YG L++G + +++ A L +++ G+ P+ + Y ++I GL A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 195 FEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
F++ + M R C P P VTY ++ CK G LE A ++K MI G +P
Sbjct: 61 FDDARELFADMNRRG--CPPSP--VTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K G+VE+A+ L+ +M G TP+R +++ ++ LC++ K+D A QV EM
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ R D + +LI L + K +EA F M+ G+ P +T+
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN 224
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M + + P++ Y +IDGL +AG+ + + ++ L P+ V YTSL+ G C A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A ++ M RG PSP TYN K G +E+A +L +KMIE G+ PD +TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ LCK +++ A+ + EM+ GC + + +I LC+ K D+A F +M R
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ P ++ L D K G A KL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKL 207
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 128/316 (40%), Gaps = 43/316 (13%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S+ TF ILI + + G ++ A + + V + + + L+ LC RV A
Sbjct: 254 SRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVT----YSTLISGLCSIARVDDA 309
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ + PTV N L++G ++ +K+A M +P+VVTY TLV
Sbjct: 310 RHLLEDM--VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G+CR + +RA L+ +M G+ PN + Y ++ GL +A R E G+ +
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK---------- 261
P + TYT+L+ G+C AG ++G K+ M+ G P Y K
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487
Query: 262 ---------------------------FGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
GK+E A+ R M+ G P L+ L
Sbjct: 488 LREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547
Query: 295 CKEDKLDLAIQVSKEM 310
CK + A V +E+
Sbjct: 548 CKSGQGGEARAVLEEI 563
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 15/242 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA A +L + + PD V+ +T L+ + RAG E A
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT---LVHGHCRAGQTERARELLS--- 384
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DMV + + L+ LCK R+ A F + K AP + Y L+ G+
Sbjct: 385 --DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS--SGCAPNLFTYTALILGF 440
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V + + EM ++P+ V YGTL C+ R RA+ +++E R E + A
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR-ESLRSEA 499
Query: 180 I---VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
VY +DGL++AG+ E G + + P SLV G CK+G A +
Sbjct: 500 WGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 559
Query: 237 LK 238
L+
Sbjct: 560 LE 561
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M R P +Y +K GK+ DA +L++K++ SG TP + Y L+ LC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A ++ +M RGC T ++I C+ +EA + MI G VP +T+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 360 LNDEFKKRGMTALAQKLCNVM 380
+ D K G A L N M
Sbjct: 121 VMDGLCKSGRVEEALLLFNEM 141
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 171/337 (50%), Gaps = 11/337 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
H PD VS + LI + G V+AA F+ + A + L+D LC
Sbjct: 40 AHAQPDVVS---YTTLINGLCKLGRVDAA---FDLFRKMVAAGGCRPNAFTYNALVDGLC 93
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
KQ R+ AA + ++ D +AP V YN L+ F+ V +A + +M +E P
Sbjct: 94 KQDRLDAARAVIAEARKRD--FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 151
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+V++ ++ G CR RR+ A+ + EM PN + Y+ VIDGL ++ + +E +++
Sbjct: 152 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 211
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R + P +V YT LV G+ AG L+ A +L+ M+S+G +P TY K G
Sbjct: 212 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 271
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+V+DA ++R+++ + +P+ +TY L+ C+ ++D +V +EM CR ++ T
Sbjct: 272 RVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRP---NVVTYN 328
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+I L + + +EA F +M G VP T++ L
Sbjct: 329 TMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 158/326 (48%), Gaps = 7/326 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T I+++ R G V A+ F+ + L + + L++ LCK GRV AA +
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLEL---AHAQPDVVSYTTLINGLCKLGRVDAAFDL 68
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K P YN L++G + + A E RK + P+VVTY TL+
Sbjct: 69 FRKMVAAG-GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAAL 127
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+L RVD A+ +M +EG P + +N +I GL A R + + + + P +
Sbjct: 128 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 187
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY+ ++ G CK+ L+ A ++L M+S G P Y FS G+++ A+ L R+
Sbjct: 188 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 247
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G PD +TY +++ LCK ++D A ++ +E+ C ++ T + LI CR +
Sbjct: 248 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 307
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
DE +M R P+ +T+ +
Sbjct: 308 VDEGGKVMREMACR---PNVVTYNTM 330
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 110 RVYNILLNGWFRSKNVKDA-ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
R +I+L G R V A E F + + P+VV+Y TL+ G C+L RVD A L +
Sbjct: 11 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 70
Query: 169 EM-RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+M G PNA YN ++DGL + R + ++ + P +VTY +L+ +
Sbjct: 71 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQL 130
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G ++ A M G++P+ ++N + ++ DA+ ++ +MI+ + P+ +TY
Sbjct: 131 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTY 190
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+++ LCK D+LD A Q+ M GC DL T L+ + D A M+
Sbjct: 191 SVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVS 250
Query: 348 RGLVPHYLTFKRLNDEFKKRG 368
+G +P +T+ + D+ K G
Sbjct: 251 QGCIPDVVTYTVVIDKLCKVG 271
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 146/294 (49%), Gaps = 12/294 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K D+A ++ + PD V+ +T + + + R V+ A+ TF
Sbjct: 88 LVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGR---VDEALATFTQMT 144
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V S F ++ LC+ R+ A E F++ +D+ + P + Y+++++G
Sbjct: 145 EEGYVPTLVS----FNAIITGLCRARRLADALEVFNEM--IDRDFHPNLVTYSVVIDGLC 198
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S + +A++ M E P++V Y LV G+ R+D A+ L++ M +G P+ +
Sbjct: 199 KSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVV 258
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VID L + GR ++ + + + P +VTY++L+ GYC+A ++ K+++ M
Sbjct: 259 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 318
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
R P+ TYN S + E+A ++R+M E G+ PD TY L + L
Sbjct: 319 ACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 4/237 (1%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAI-RLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M E + N T +++G CR RV +A+ + +P+ + Y T+I+GL + G
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 194 RFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
R + + R +V G P TY +LV G CK L+ A ++ R F P T
Sbjct: 61 RVDAAFDLF-RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVT 119
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + G+V++A+ + +M E GY P ++++ ++ LC+ +L A++V EM
Sbjct: 120 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 179
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
R +L T +++I LC+ + DEA + M+ G P + + L F G
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAG 236
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 171/337 (50%), Gaps = 11/337 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
H PD VS + LI + G V+AA F+ + A + L+D LC
Sbjct: 90 AHAQPDVVS---YTTLINGLCKLGRVDAA---FDLFRKMVAAGGCRPNAFTYNALVDGLC 143
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
KQ R+ AA + ++ D +AP V YN L+ F+ V +A + +M +E P
Sbjct: 144 KQDRLDAARAVITEARKRD--FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+V++ ++ G CR RR+ A+ + EM PN + Y+ VIDGL ++ + +E +++
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R + P +V YT LV G+ AG L+ A +L+ M+S+G +P TY K G
Sbjct: 262 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 321
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+V+DA ++R+++ + +P+ +TY L+ C+ ++D +V +EM CR ++ T
Sbjct: 322 RVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRP---NVVTYN 378
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+I L + + +EA F +M G VP T++ L
Sbjct: 379 TMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 174/361 (48%), Gaps = 12/361 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I+ A + D+A+ LL + + G + D T I+++ R G V A+ F+ +
Sbjct: 31 LIRGFCNASDLDAAFSLLREMDVEGMQCND----RTTSIILQGLCRCGRVAQALEHFDAS 86
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L + + L++ LCK GRV AA + F K P YN L++G
Sbjct: 87 LEL---AHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAG-GCRPNAFTYNALVDGL 142
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + A E RK + P+VVTY TL+ +L RVD A+ +M +EG P
Sbjct: 143 CKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTL 202
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +N +I GL A R + + + + P +VTY+ ++ G CK+ L+ A ++L
Sbjct: 203 VSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDR 262
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+S G P Y FS G+++ A+ L R+M+ G PD +TY +++ LCK +
Sbjct: 263 MVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGR 322
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D A ++ +E+ C ++ T + LI CR + DE +M R P+ +T+
Sbjct: 323 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNT 379
Query: 360 L 360
+
Sbjct: 380 M 380
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 10/332 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ +LIR + A ++AA F +D V+ I+L LC+ GRV A
Sbjct: 24 SSVTYNVLIRGFCNASDLDAA---FSLLREMD-VEGMQCNDRTTSIILQGLCRCGRVAQA 79
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGTL 150
E+F EL + P V Y L+NG + V A + +M PN TY L
Sbjct: 80 LEHFDASLELAHAQ-PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
V+G C+ R+D A ++ E RK P+ + YNT++ L + GR +E + E
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT--EE 196
Query: 211 G--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
G PT+V++ +++ G C+A L A ++ MI R F P+ TY+ K ++++A
Sbjct: 197 GYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEA 256
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
L +M+ G PD + Y L+ +LD A+ + + M +GC D+ T T++I
Sbjct: 257 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 316
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LC++ + D+A F +++ P+ +T+ L
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTYSAL 348
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 143/297 (48%), Gaps = 6/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDA-ERFW 132
+ +L+ C + AA F +E+D + R +I+L G R V A E F
Sbjct: 28 YNVLIRGFCNASDLDAA---FSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFD 84
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVE 191
+ + P+VV+Y TL+ G C+L RVD A L ++M G PNA YN ++DGL +
Sbjct: 85 ASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCK 144
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
R + ++ + P +VTY +L+ + G ++ A M G++P+ +
Sbjct: 145 QDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVS 204
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + ++ DA+ ++ +MI+ + P+ +TY +++ LCK D+LD A Q+ M
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
GC DL T L+ + D A M+ +G +P +T+ + D+ K G
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 321
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 146/294 (49%), Gaps = 12/294 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K D+A ++ + PD V+ +T + + + R V+ A+ TF
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGR---VDEALATFTQMT 194
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V S F ++ LC+ R+ A E F++ +D+ + P + Y+++++G
Sbjct: 195 EEGYVPTLVS----FNAIITGLCRARRLADALEVFNEM--IDRDFHPNLVTYSVVIDGLC 248
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S + +A++ M E P++V Y LV G+ R+D A+ L++ M +G P+ +
Sbjct: 249 KSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVV 308
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VID L + GR ++ + + + P +VTY++L+ GYC+A ++ K+++ M
Sbjct: 309 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
R P+ TYN S + E+A ++R+M E G+ PD TY L + L
Sbjct: 369 ACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF---------------------- 245
C+ + VTY L++G+C A DL+ A +L+ M G
Sbjct: 19 CQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQ 78
Query: 246 --------------LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRLTYHIL 290
P +Y K G+V+ A +L+RKM+ +G P+ TY+ L
Sbjct: 79 ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK+D+LD A V E + R D+ T L+ L ++ + DEA A F M G
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGY 198
Query: 351 VPHYLTFKRL 360
VP ++F +
Sbjct: 199 VPTLVSFNAI 208
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 193/376 (51%), Gaps = 8/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L + A ++ D G P+ V+ +T L+ + RAG ++ A
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT---LVAAFCRAGELDGAERVVSL-- 70
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N F +++ LCK GR++ A + F + + + AP V YN LL+G+
Sbjct: 71 -MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM--VREGLAPDVVSYNTLLSGYC 127
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + ++ + EM + + P+VVT+ +L+ C+ +++A+ LV +MR+ G+ N +
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +IDG + G ++ +E C P++V Y +L+ GYCK G ++ A ++++ M
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++ P TY+ + K G ++ A L +KM++ G PD +TY L++ LC+E +L
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A ++ + M G D T T LI C+ ++A + ++MIR+G++P +T+ L
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367
Query: 361 NDEFKKRGMTALAQKL 376
+ K T A +L
Sbjct: 368 INGLSKSARTKEAHRL 383
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 167/336 (49%), Gaps = 9/336 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+R G +E A+ N A + L+ + C+ G + A
Sbjct: 12 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPN----AVTYNTLVAAFCRAGELDGAERV 67
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+E + + P + +N ++NG ++ ++ A + + EM +E + P+VV+Y TL+ GY
Sbjct: 68 VSLMRE-EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ + ++ + EM + G+ P+ + + ++I +AG E+ ++ + E G M
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR--ERGLRM 184
Query: 215 --VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VT+T+L+ G+CK G L+ A ++ M G PS YN + K G+++ A L
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M PD +TY ++ CK LD A Q++++M +G D T + LI LC
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ ++A FE+M++ G+ P T+ L D K G
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 24/362 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V TF LI +AG +E A+ + N F L+D CK+G
Sbjct: 148 VPDVV---TFTSLIHATCKAGNLEQAVALVAQMRERGLRMN----EVTFTALIDGFCKKG 200
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + ++ P+V YN L+NG+ + + A EM + V P+VVT
Sbjct: 201 FLDDALLAVEEMRKC--GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 258
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ GYC++ +D A +L ++M K+G+ P+AI Y+++I GL E R + + E L
Sbjct: 259 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYT+L+ G+CK G++E A + MI +G LP TY+ SK + +
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378
Query: 267 DAMNLYRKMIESGYTPDRLTYHIL---------------LKILCKEDKLDLAIQVSKEMK 311
+A L K+ PD + Y L LK C + + A +V + M
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 438
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
R +D ++LIH CR +A + + M+R G P+ + L + GM
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 498
Query: 372 LA 373
A
Sbjct: 499 EA 500
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 19/384 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ +A E D A ++ L + G+ P+ V TF ++ +AG +E A F+
Sbjct: 51 LVAAFCRAGELDGAERVVSLMREEGNAKPNLV---TFNSMVNGLCKAGRMEGARKVFD-- 105
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+MV+ + LL CK G + + F + + + P V + L++
Sbjct: 106 ---EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ--RGLVPDVVTFTSLIHA 160
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++ N++ A +MR+ + N VT+ L++G+C+ +D A+ V+EMRK GI+P+
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YN +I+G + GR + ++ P +VTY++++ GYCK G+L+ A ++ +
Sbjct: 221 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 280
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ +G LP TY+ R + ++ DA L+ M++ G PD TY L+ CKE
Sbjct: 281 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ A+ + EM +G D+ T ++LI+ L + + EA + VP + +
Sbjct: 341 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 400
Query: 359 RL-----NDEFKKRGMTALAQKLC 377
L EFK + AL + C
Sbjct: 401 ALMLCCSKAEFKS--VVALLKGFC 422
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 130/251 (51%), Gaps = 5/251 (1%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V PNV TY LV C R++ A+ +V +MR G PNA+ YNT++ AG
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 195 FEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ ++ L+ E G P +VT+ S+V G CKAG +EGA K+ M+ G P +
Sbjct: 61 LDGAERVVS--LMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + K G + +++ ++ +M + G PD +T+ L+ CK L+ A+ + +M+
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
RG ++ T T LI C+ D+A E+M + G+ P + + L + + K G
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 372 LAQKLCNVMSS 382
LA++L M +
Sbjct: 239 LARELIREMEA 249
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 145/310 (46%), Gaps = 54/310 (17%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
AP V YNIL+ +++A +MR PN VTY TLV +CR +D
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 163 AIRLVKEMRKEG-IEPNAIVYNTVIDGLVEAGRFEEV----------------------- 198
A R+V MR+EG +PN + +N++++GL +AGR E
Sbjct: 64 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123
Query: 199 ----------------SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
S M +R LV P +VT+TSL+ CKAG+LE A ++ M
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLV----PDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
RG + T+ F K G ++DA+ +M + G P + Y+ L+ CK ++DL
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF----- 357
A ++ +EM+ + D+ T + +I C++ D A + M+++G++P +T+
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299
Query: 358 -----KRLND 362
KRLND
Sbjct: 300 GLCEEKRLND 309
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 25/297 (8%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ CK G + +A + +K L + P Y+ L+ G K + DA +
Sbjct: 259 YSTIISGYCKVGNLDSAFQL--NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFEN 316
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P+ TY TL++G+C+ V++A+ L EM ++G+ P+ + Y+ +I+GL ++ R
Sbjct: 317 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 376
Query: 195 FEEVSGMMERFLVCEPGPTMVTY---------------TSLVKGYCKAGDLEGASKILKM 239
+E ++ + +P P + Y +L+KG+C G ++ A K+ +
Sbjct: 377 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 436
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED- 298
M+ R + + Y+ + G V A++ +++M+ SG++P+ + L++ L +E
Sbjct: 437 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 496
Query: 299 --KLDLAIQVSKEMKCRGCDI-DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ D AIQ + C C + D + S LI L + D M R GL+P
Sbjct: 497 VVEADNAIQ--DLLTC--CPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 109/298 (36%), Gaps = 59/298 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K DSA+ L + +PD + T+ LIR + A FE N
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAI---TYSSLIRGLCEEKRLNDACELFE--N 316
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + D + L+D CK+G V+ A + + + P V Y++L+NG
Sbjct: 317 MLQLGVQPDE--FTYTTLIDGHCKEGNVEKALSLHDEM--IRKGVLPDVVTYSVLINGLS 372
Query: 121 RSKNVKDAERFWLEMRKENVTPNVV----------------------------------- 145
+S K+A R ++ E+ P+ +
Sbjct: 373 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 432
Query: 146 ---------------TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
Y L+ G+CR V +A+ K+M + G PN+ +++ GL
Sbjct: 433 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 492
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
E G E ++ L C P +L+ K G+++ +L M G LPS
Sbjct: 493 EEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 190/376 (50%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L A +L D G P+ V+ +T L+ + RAG V+ A +
Sbjct: 163 LVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNT---LVAAFCRAGEVDRAERLVDMMR 219
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N + F +++ +CK GR++ A + F + + + AP YN L+ G+
Sbjct: 220 EGGLKPNLVT----FNSVVNGICKAGRMEDARKVFDEM--VKEGLAPDGVSYNTLVGGYC 273
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A + EM ++ + P+VVT+ +L+ C+ ++RA+ LV+EMR+ G++ N I
Sbjct: 274 KVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +IDG + G ++ + C P++V Y +L+ GYC G ++ A ++++ M
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++G P TY+ + K G A L ++M+E+G PD +TY L+++LC+E +L
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + K M G D T T LI C+ + A + ++M++ G++P +T+ L
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513
Query: 361 NDEFKKRGMTALAQKL 376
+ K T AQ+L
Sbjct: 514 INGLSKSARTKEAQRL 529
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 138/278 (49%), Gaps = 4/278 (1%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L AP V YNIL+ + K+A +MR PN VTY TLV +CR V
Sbjct: 149 LSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEV 208
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
DRA RLV MR+ G++PN + +N+V++G+ +AGR E+ + + + P V+Y +L
Sbjct: 209 DRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTL 268
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
V GYCK G A + M +G +P T+ K G +E A+ L R+M E G
Sbjct: 269 VGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS--TMLIHLLCRMYKFDEA 338
+ +T+ L+ CK+ LD A+ +EM R C I LI+ C + + DEA
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREM--RQCRIQPSVVCYNALINGYCMVGRMDEA 386
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+M +G+ P +T+ + + K G T A +L
Sbjct: 387 RELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL 424
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 1/279 (0%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+AP+V YN +L ++ A RF+ M + V PNV TY LV C A
Sbjct: 118 GYAPSVLAYNAVLLA-LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ ++++MR G +PNA+ YNT++ AG + +++ P +VT+ S+V G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
CKAG +E A K+ M+ G P +YN + K G +A++++ +M G PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+T+ L+ ++CK L+ A+ + +EM+ RG ++ T T LI C+ D+A
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+M + + P + + L + + G A++L M +
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA 395
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 175/392 (44%), Gaps = 32/392 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V TF LI +AG +E A+ + N + F L+D CK+G
Sbjct: 294 MPDVV---TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEIT----FTALIDGFCKKG 346
Query: 87 RVKAASEYFHKRKELDQS-WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ A +E+ Q P+V YN L+NG+ + +A EM + V P+VV
Sbjct: 347 FLDDA---LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVV 403
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY T++ YC+ A +L ++M + G+ P+AI Y+++I L E R + + +
Sbjct: 404 TYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTYTSL+ G+CK G++E A + M+ G LP TY+ SK +
Sbjct: 464 ISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSART 523
Query: 266 EDAMNLYRKMIESGYTPDRLTYH---------------ILLKILCKEDKLDLAIQVSKEM 310
++A L K+ P + Y LLK C + ++ A +V + +
Sbjct: 524 KEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSI 583
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
R ++D ++LIH CR +A + + M++ G P+ + L ++GM
Sbjct: 584 LDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMV 643
Query: 371 ALAQKL------CNVMSSVPRSMELLDSRCKD 396
A ++ C ++ S L+D K+
Sbjct: 644 VEADQVIQQLLNCCSLADAEASKALIDLNLKE 675
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 115/286 (40%), Gaps = 52/286 (18%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L + CK G +A + ++ L+ P Y+ L+ K + DA +
Sbjct: 405 YSTILSAYCKNGDTHSAFQL--NQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKN 462
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ VTY +L++G+C+ V+RA+ L EM K G+ P+ + Y+ +I+GL ++ R
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522
Query: 195 FEEVSGMMERFLVCEPGPTMV--------------------------------------- 215
+E ++ + EP P +
Sbjct: 523 TKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQS 582
Query: 216 -----------TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
Y+ L+ G+C+ G++ A K M+ GF P+ T+ R + G
Sbjct: 583 ILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGM 642
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
V +A + ++++ D L+ + KE +D + V M
Sbjct: 643 VVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGM 688
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 200/409 (48%), Gaps = 29/409 (7%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L A +FD A+ ++ + +G VPD T+ +I A VE A FE
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPD---DSTYSKVIGFLCDASKVEKAFSLFE----- 484
Query: 63 DMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+M +N + IL+DS CK G ++ A ++F + L + P V Y L++ + +
Sbjct: 485 EMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM--LHKGCTPNVVTYTALIHAYLK 542
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE----- 176
+K + A+ + M E PNVVTY L++G+C+ ++++A ++ MR + IE
Sbjct: 543 AKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD-IESSDMD 601
Query: 177 ------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
PN I Y ++DGL +A R +E +++ L P + Y +++ G+
Sbjct: 602 KYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGF 661
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G L+ A ++ M RG+ P+ TY+ F K +++ + + KM+E+ TP+
Sbjct: 662 CKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNV 721
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+ Y ++ LCK K D A ++ +M+ +GC+ ++ T T +I + K ++ F D
Sbjct: 722 VIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRD 781
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSR 393
M +G P+++T++ L + G+ A KL + M +L R
Sbjct: 782 MCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHR 830
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 11/336 (3%)
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+D ++F + ++ LC+ + A + H+ + S P V Y ILL+G R
Sbjct: 269 IDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRS--SSCIPNVVTYRILLSGCLR 326
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ +R M E PN + +L+ YC+ R A +L K+M K G +P +V
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLV 386
Query: 182 YNTVIDGLV--EAGRFEEVSGMMERFL--VCEPGPTM--VTYTSLVKGYCKAGDLEGASK 235
YN I + E ++ ++E+ + + G + V ++ + C AG + A K
Sbjct: 387 YNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFK 446
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
I+ M+ +GF+P +TY+ + KVE A +L+ +M +G P TY IL+ C
Sbjct: 447 IICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFC 506
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K + A + EM +GC ++ T T LIH + + A FE M+ G P+ +
Sbjct: 507 KAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVV 566
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
T+ L D K G +K C + + + +E D
Sbjct: 567 TYTALIDGHCKAGQI---EKACQIYARMRGDIESSD 599
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 119/308 (38%), Gaps = 74/308 (24%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------------------------- 170
P+ TY L++ + R ++D A + +EM
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDL 268
Query: 171 --RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
E P+ + YN ++ GL EA FEE ++ R P +VTY L+ G + G
Sbjct: 269 IDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKG 328
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
L +IL MMI+ G P+ +N + K A L++KMI+ G P L Y+
Sbjct: 329 QLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYN 388
Query: 289 ILL-----------------------------------------KILCKEDKLDLAIQVS 307
I + + LC K D A ++
Sbjct: 389 IFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKII 448
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EM +G D T + +I LC K ++A + FE+M R G+VP T+ L D F K
Sbjct: 449 CEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKA 508
Query: 368 GMTALAQK 375
G+ A+K
Sbjct: 509 GLIQQARK 516
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 123/314 (39%), Gaps = 72/314 (22%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKE--------------------------------- 100
+++ ++D CK G+++ A E F K E
Sbjct: 653 VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM 712
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L+ S P V +Y +++G + +A + L+M ++ PNVVTY +++G+ + ++
Sbjct: 713 LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKI 772
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----------------------- 197
++ + L ++M +G PN I Y +I+ G +E
Sbjct: 773 EQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKI 832
Query: 198 VSGMMERFLVC----------EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
+ G + F+ E P Y L+ Y KAG LE A +L+ + S
Sbjct: 833 IEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHA 892
Query: 248 SPTTYNY--FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
Y Y S KV+ A+ LY MI P+ L+K L K DK A+Q
Sbjct: 893 VSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQ 952
Query: 306 VSKEMKCRGCDIDL 319
+S + C +D+
Sbjct: 953 LSDSI----CQMDI 962
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
LV+ C+ G A + L + G+ PS TTYN + F + K++ A + R+M+
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS--TMLIHLLCRMYKFDE 337
+ DR T LCK K A + E + D DT ++ LC F+E
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDEAE----DFVPDTVFYNRMVSGLCEASLFEE 297
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A M +P+ +T++ L ++G +++ ++M
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMM 340
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N+ R + G A+ ++ + GY P + TY+ L+++ + DKLD A V +EM
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEA 338
+D T + + LC+ K EA
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREA 265
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 8/304 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAAS---EYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+N D F IL+D+LCK+GR+ A KR E P + YN L+ G+
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-----KPDIVTYNALMEGYCSR 313
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+NV +A + M K + P+V+ Y L++GYC+ + VD A+ L KE+ + + P Y
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N++IDGL +GR V +++ P +VTY L+ CK G + A +L MM+
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+G P+ TYN + V A +++ +M++SG PD L Y++L+ CK + +D
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
AI + KEM+ + D+ + LI LC + + ++M G P +T+ L D
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 363 EFKK 366
F K
Sbjct: 554 AFCK 557
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 170/353 (48%), Gaps = 18/353 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ + +LI Y + MV+ A+ F+ N ++V S + L+D LC GR
Sbjct: 333 PDVLN---YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS----YNSLIDGLCNSGR 385
Query: 88 VKAASEYFHKRKELDQ----SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ H +K LD+ + P V YNIL++ + + +A + M K+ V PN
Sbjct: 386 IS------HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+VTY +++GYC V+ A + M K G+EP+ + YN +I+G + +E + +
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P + +Y SL+ G C G + ++L M G P TYN F K
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ A++L+R+++E G PD T H ++ LCK +KL +A K + GC ++ T T
Sbjct: 560 PFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+LI+ LC+ F EA M P +TF+ + +R T A+KL
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 180/368 (48%), Gaps = 11/368 (2%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS 73
A+ LL + P+ V TF +I + GM+ A+ +F NL + + +
Sbjct: 109 AFSLLATILKSGYQPNLV---TFNTIINGFCINGMIFKAL---DFCQNL-LAQGYLFDQF 161
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFW 132
+ L++ L K G++KAA H +E+++S P + +Y+ L++G + V DA
Sbjct: 162 TYGTLINGLSKNGQIKAA---LHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
++ + + + VTY +L++G C + R +L+ +M +E ++P+ +N +ID L +
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR E G++ P +VTY +L++GYC ++ A ++ M+ RG P Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + K V++AM L++++ P +Y+ L+ LC ++ ++ EM
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
D+ T +LI LC+ + EA M+++G+ P+ +T+ + D + R +
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458
Query: 373 AQKLCNVM 380
A+ + N M
Sbjct: 459 AKDIFNRM 466
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 152/335 (45%), Gaps = 8/335 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
TF ILI Y + F F+ ++K+ + F +++ C G + A +
Sbjct: 92 TFTILINCY-----FHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALD 146
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ L Q + Y L+NG ++ +K A EM K +V PN+V Y L++G
Sbjct: 147 FCQNL--LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ V A+ L ++ + GI +A+ YN++IDG GR++EV+ ++ + + P
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ L+ CK G + A +L MM RG P TYN + V +A L+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M++ G PD L Y++L+ CK +D A+ + KE+ + + + LI LC
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ ++M P +T+ L D K G
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG 419
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 8/330 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
S+F+ LL ++ + G A F + + + +P++ + IL+N +F + A
Sbjct: 55 TSVFDKLLGAIVRMGHYPTAISLFTQLQS--KGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ K PN+VT+ T++ G+C + +A+ + + +G + Y T+I+GL +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ + +++ P +V Y++L+ G CK G + A + + RG L T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN G+ ++ L KM+ PD T++IL+ LCKE ++ A V M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT- 370
RG D+ T L+ C EA F M++RGL P L + L D + K M
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 371 ---ALAQKLC--NVMSSVPRSMELLDSRCK 395
L ++LC N++ ++ L+D C
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCN 382
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 18 LLDKI-GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LLD++ G + PD V T+ ILI + G + A+ M K +
Sbjct: 392 LLDEMHGSAQPPDVV---TYNILIDALCKEGRILEALGVLVMM----MKKGVKPNIVTYN 444
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++D C + V A + F++ + P + YN+L+NG+ +++ V +A + EMR
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRM--VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+N+ P++ +Y +L++G C L R+ L+ EM G P+ I YN ++D + F+
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + R +V P T ++V CK L+ A LK ++ G P+ TY
Sbjct: 563 KAISLF-RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILI 621
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +AM L KM ++ PD +T+ I++ +L + ++ D A ++ +EM RG
Sbjct: 622 NALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 46/289 (15%)
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD-------------------------- 161
+ RF+ + +N N CR R VD
Sbjct: 15 SSRFFGHFQPQNPHKN-----------CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLG 63
Query: 162 ---------RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
AI L +++ +GI P+ + +I+ ++ L P
Sbjct: 64 AIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQP 123
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+VT+ +++ G+C G + A + ++++G+L TY SK G+++ A++L
Sbjct: 124 NLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLL 183
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M +S P+ + Y L+ LCK+ + A+ + ++ RG +D T LI C +
Sbjct: 184 QEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSV 243
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ E + M+R + P TF L D K G AQ + +MS
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 165/327 (50%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LCK G+ A E F + + + P V Y ++NG + A + +
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDM--VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVTY T+++ C+ RRV+ A+ + M+ +GI PN YN++I GL R
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ E S M+ + P +VT++ L+ +CK G++ A +LK M G P+ TY+
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+S +V +A L+ MI G PD +Y+IL+ CK ++ A Q+ EM +G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ + LI LC++ + EA F++M+ G +P T+ L D F K+G A A
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492
Query: 375 KLCNVMSSV---PRSME---LLDSRCK 395
+L M S P + L+D+ CK
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCK 519
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 168/373 (45%), Gaps = 17/373 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
+I L K +F A L D + PD T+ +I + G AA F
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVARGYQPDV---HTYTTIINGLCKIGETVAAAGLFRKMG 254
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E D+V + ++DSLCK RV A + F K + +P + YN L+
Sbjct: 255 EAGCQPDVVT--------YSTIIDSLCKDRRVNEALDIFSYMKA--KGISPNIFTYNSLI 304
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G ++A EM N+ PN+VT+ L+ +C+ V A ++K M + G+E
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + Y+++++G E + + + P + +Y L+ GYCKA + A ++
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 424
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
MI +G P +YN + G++ +A +L++ M+ +G PD TY ILL CK
Sbjct: 425 FNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCK 484
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ L A ++ + M+ ++ +LI +C+ EA F ++ +GL P+
Sbjct: 485 QGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQI 544
Query: 357 FKRLNDEFKKRGM 369
+ + + K G+
Sbjct: 545 YTTIINGLCKEGL 557
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L++ CK+G V A E+ P V Y+ L+NG+ V +A + +
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEM--GVEPNVVTYSSLMNGYSLQAEVVEARKLFDV 392
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+V +Y L+ GYC+ +R+ A +L EM +G+ P+ + YNT+IDGL + GR
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + L P + TY+ L+ G+CK G L A ++ + M S P+ YN
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K +++A L+ ++ G P+ Y ++ LCKE LD A++ + M+ G
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Query: 315 C 315
C
Sbjct: 573 C 573
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 151/331 (45%), Gaps = 9/331 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +I + V A+ F + K + L+ LC R
Sbjct: 260 PDVV---TYSTIIDSLCKDRRVNEALDIFSYMK----AKGISPNIFTYNSLIQGLCNFSR 312
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ AS ++ L+ P + +++L+N + + NV +A M + V PNVVTY
Sbjct: 313 WREASAMLNEMMSLN--IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTY 370
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ GY V A +L M +G +P+ YN +I+G +A R E + +
Sbjct: 371 SSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIH 430
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +V+Y +L+ G C+ G L A + K M++ G LP TY+ F K G +
Sbjct: 431 QGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAK 490
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L+R M + P+ + Y+IL+ +CK L A ++ E+ +G ++ T +I+
Sbjct: 491 AFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIIN 550
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
LC+ DEA F +M G P+ ++
Sbjct: 551 GLCKEGLLDEALEAFRNMEEDGCPPNEFSYN 581
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 155/323 (47%), Gaps = 9/323 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + A +L + + + +P+ V TF +LI + + G V A +
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIV---TFSLLINIFCKEGNVFEARGVLKTMT 359
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + N + +SL ++ Q V A + F + + P V YNIL+NG+
Sbjct: 360 EMGVEPNVVTYSSL----MNGYSLQAEVVEARKLFDVM--ITKGCKPDVFSYNILINGYC 413
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++K + +A++ + EM + +TP++V+Y TL++G C+L R+ A L K M G P+
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLC 473
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ ++DG + G + + P MV Y L+ CK+ +L+ A K+ +
Sbjct: 474 TYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 533
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ Y K G +++A+ +R M E G P+ +Y+++++ +
Sbjct: 534 FVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDE 593
Query: 301 DLAIQVSKEMKCRGCDIDLDTST 323
A+Q+ EM+ +G D+ T+
Sbjct: 594 SRAVQLIGEMREKGFVADVATTA 616
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV-DRAIRLVKEMRKEGIEPNAIV 181
+N+ DA ++ M P ++ + L+ ++R D I L K+M G+ P+
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+ +I+ + R + ++ + + T+VT+ +L+ G CK G A ++ M+
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+RG+ P TY K G+ A L+RKM E+G PD +TY ++ LCK+ +++
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + MK +G ++ T LI LC ++ EASA +M+ ++P+ +TF L
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339
Query: 362 DEFKKRGMTALAQKLCNVMSSV 383
+ F K G A+ + M+ +
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEM 361
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 136/275 (49%), Gaps = 1/275 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAE-RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + +N LL+ + ++ DA +M ++P+ T L+ + +L+RVD
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G++ + +NT+I+GL + G+F + + + + P + TYT+++ G C
Sbjct: 179 VLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC 238
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+ A+ + + M G P TY+ K +V +A++++ M G +P+
Sbjct: 239 KIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIF 298
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ L++ LC + A + EM ++ T ++LI++ C+ EA + M
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 358
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
G+ P+ +T+ L + + + A+KL +VM
Sbjct: 359 TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 184/376 (48%), Gaps = 10/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K K+FD W L+ + EV +S T ++RR A A AI F +
Sbjct: 1451 MVDILGKFKQFDLMWGLINQMV---EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 1507
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+VK+ + +LLD+LCK+ VK A F +EL + P +N L++GW
Sbjct: 1508 RFGVVKDTKA----MNVLLDTLCKERSVKRARGVF---QELRGTIPPDENSFNTLVHGWC 1560
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ +K+A EM++ +P+VVTY +LVE YC + L+ EMRK PN +
Sbjct: 1561 KARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVV 1620
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ L +AGR E ++ P Y SL+ +AG LE A +++ M
Sbjct: 1621 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1680
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P+ TT+N + E+A+ L KM E PD TY LLK+ CK +
Sbjct: 1681 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1740
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + + M + D T T+L+ LCR K ++ E+M+ +G P TF +
Sbjct: 1741 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLV 1800
Query: 361 NDEFKKRGMTALAQKL 376
++ +KR + ++ +K+
Sbjct: 1801 MEKLEKRNLQSVYKKI 1816
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 14/387 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA + D A+ LLD++ +P V+ VI R +AG A+ F+
Sbjct: 36 LIHGLCKAGKLDQAY-ELLDEMRDRGIPPGVAVHNGVI--RGLCKAGRFGDALGYFKTVA 92
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + F IL+D+L K GRV+ A + F Q P V Y ++NG
Sbjct: 93 GTKCTPDIIT----FNILVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLC 147
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + A M + PNV+TY LVEG C+ R D+ L++EM + G +P+ I
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+YNT+++GL ++ R +E +++ + PT+VTY SL++ +C++ ++ A +++++M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE--- 297
RG P YN + +++DA L ++M+ + PD +TY ++ LCK+
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 298 D---KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
D KL+ A ++ + MK GC + T ++I LCR K +A A MI +VP
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMS 381
+F + K A K+ +MS
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMS 414
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N LN R+ A + + R+E PN TYG+L+ G C+ ++D+A L+ EMR
Sbjct: 2 NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GI P V+N VI GL +AGRF + G + + P ++T+ LV K+G +E
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 233 ASKILK-MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A +I + M S LP+ TY K GK++ A+ L M E+G P+ +TY +L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ LCK + D + +EM RG D+ L++ LC+ + DEA + MIR G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
P +T+ L + F + A +L VMS
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 20/364 (5%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAAS- 92
D L++ R G I N L + D L ++++ S C V S
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 93 -EYFHKRKELDQSW-----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
E F + K++D+++ P V YN ++ G R + DA+ +M
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 141 TPNVVTYGTLVEGYCRLRRVDR------AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
P+V+TY T+++G C+ RVD A +++ M++ G PNA Y VI+GL A +
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ R + E P + +++ ++ CK+ DL+ A KI MM R P+P Y
Sbjct: 368 SQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAA 427
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
SK G+V+ A+ ++ M+ES + P TY+ +L LC +++ A+++ + M +
Sbjct: 428 LIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D + LI LCR+ +EA F+ + +G + L +E K+ + A
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Query: 375 KLCN 378
+ N
Sbjct: 547 GVAN 550
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 12/325 (3%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
L+ L + G+ A + F + + P Y L++G ++ + A EMR
Sbjct: 5 LNLLVRAGQHGQAVQLFREER-----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ P V + ++ G C+ R A+ K + P+ I +N ++D LV++GR EE
Sbjct: 60 GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 199 SGMMERFLVCEPG-PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E P +VTYT+++ G CK G L+ A ++L +M G P+ TY+
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G+ + L ++M G+ PD + Y+ LL LCK +LD A+++ + M GC
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T L+ L CR + D A + M RG P + + + + AQ L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 378 NVMSS---VPRSM---ELLDSRCKD 396
M + VP + ++D CKD
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKD 324
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + D A LL + VPD ++ T + + + R A W E A
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD----ADWKLEAAC 337
Query: 61 N-LDMVKNFDS--GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L+M+K A + ++++ LC+ + + A R+ +D P + +++++
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL--RRMIDSEVVPDLSSFSMVIG 395
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+S ++ A + + M + PN V Y L++G + VD+A+R V E+ E P
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR-VFELMVESFRP 454
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
YN+V+DGL GR EE M+E + E P +Y +L++G C+ +E A ++
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ + ++GF YN K ++ DA + K+IE+GY
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 145/316 (45%), Gaps = 16/316 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++++ ++K+ D A+ L+ PD ++ +T + + R AR +A + A
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRV------KAASEYFHKRKELDQSWAPTVRVYNI 114
+ V + + ++D LCK RV +AA E K+ P Y +
Sbjct: 307 CVPDVITYST-------IIDGLCKDWRVDADWKLEAACEILEMMKQ--TGCPPNAGTYAV 357
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
++ G R++ + A M V P++ ++ ++ C+ +D A ++ M +
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+PN + Y +IDGL + G ++ + E +V P + TY S++ G C G +E A
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAV 476
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++++ MI + P +Y R + VE+A L++ + G+ + Y++L+ L
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 295 CKEDKLDLAIQVSKEM 310
CK+ +L A V+ ++
Sbjct: 537 CKKKRLSDAHGVANKL 552
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 184/376 (48%), Gaps = 10/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K K+FD W L+ + EV +S T ++RR A A AI F +
Sbjct: 1492 MVDILGKFKQFDLMWGLINQMV---EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 1548
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+VK+ + +LLD+LCK+ VK A F +EL + P +N L++GW
Sbjct: 1549 RFGVVKDTKA----MNVLLDTLCKERSVKRARGVF---QELRGTIPPDENSFNTLVHGWC 1601
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ +K+A EM++ +P+VVTY +LVE YC + L+ EMRK PN +
Sbjct: 1602 KARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVV 1661
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ L +AGR E ++ P Y SL+ +AG LE A +++ M
Sbjct: 1662 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1721
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P+ TT+N + E+A+ L KM E PD TY LLK+ CK +
Sbjct: 1722 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1781
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + + M + D T T+L+ LCR K ++ E+M+ +G P TF +
Sbjct: 1782 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLV 1841
Query: 361 NDEFKKRGMTALAQKL 376
++ +KR + ++ +K+
Sbjct: 1842 MEKLEKRNLQSVYKKI 1857
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 188/378 (49%), Gaps = 13/378 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LL D + VPD V T+ LI G VE A+ F A K ++
Sbjct: 313 LLKDAVFKGFVPDQV---TYCSLINGLCAEGDVERALELFNEAQ----AKGIKPDIVVYN 365
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ LC QG + A + ++ E + P ++ YNI++NG + N+ DA +
Sbjct: 366 SLVKGLCLQGLILHALQVMNEMAE--EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 423
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ P+V T+ TL++GYC+ ++D A++LV+ M + GI P+ I YN+V++GL +AG+
Sbjct: 424 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 483
Query: 197 EVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EV+ + ++ C P P +TY L++ +C++ +E ASK++ M G P ++N
Sbjct: 484 EVNETFQEMILKGCHPNP--ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 541
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G +E A L++K+ E GY+ T++ L+ + + +A ++ EM +G
Sbjct: 542 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 601
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T +LI C+ D A +MI++G +P TF R+ + A
Sbjct: 602 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 661
Query: 375 KLCNVMSSVPRSMELLDS 392
+ ++M + E++D+
Sbjct: 662 GIIHIMVKIGVVPEVVDT 679
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK+ + A Y R+ ++Q P YN +++G+ + V++A +
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYL--RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 316
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ P+ VTY +L+ G C V+RA+ L E + +GI+P+ +VYN+++ GL G
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 376
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+M P + TY ++ G CK G++ A+ ++ I +G+LP T+N
Sbjct: 377 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 436
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K K++ A+ L +M E G PD +TY+ +L LCK K++ + +EM +G
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 496
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C + T +LI CR K +EAS M + GL P ++F L F + G
Sbjct: 497 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 550
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 3/297 (1%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
GA + ++ L G A + F + L P + +N +L+ + +V +A
Sbjct: 151 GAVAYCTVVCGLYAHGHTHDARQLFDQM--LHTHVFPNLAAFNKVLHALCKRGDVLEAGL 208
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
++ + ++ N+ TY + G C R+ A+RLV MR + P+ + YNT+I GL
Sbjct: 209 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLC 267
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ +E + R + P TY +++ GYCK ++ A+++LK + +GF+P
Sbjct: 268 KKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV 327
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY G VE A+ L+ + G PD + Y+ L+K LC + + A+QV EM
Sbjct: 328 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 387
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
GC D+ T ++I+ LC+M +A+ D I +G +P TF L D + KR
Sbjct: 388 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 444
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 7/295 (2%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ GR++ A + F + + P YN +++ + A + ++ M V+P+
Sbjct: 63 RAGRLRDAVDAFERMDLF--ACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 120
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+ T+ + +C R A+RL++ + G A+ Y TV+ GL G + + +
Sbjct: 121 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 176
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L P + + ++ CK GD+ A +L +I RG + TYN + R + G
Sbjct: 177 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 236
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++ +A+ L M + PD +TY+ L++ LCK+ A+ + M +GC D T
Sbjct: 237 RLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 295
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+I C++ EA+ +D + +G VP +T+ L + G A +L N
Sbjct: 296 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 193/376 (51%), Gaps = 8/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L + A ++ D G P+ V+ +T L+ + RAG ++ A
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT---LVAAFCRAGELDGAERVVSL-- 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N F +++ LCK GR++ A + F + + + AP V YN LL+G+
Sbjct: 213 -MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM--VREGLAPDVVSYNTLLSGYC 269
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + ++ + EM + + P+VVT+ +L+ C+ +++A+ LV +MR+ G+ N +
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +IDG + G ++ +E C P++V Y +L+ GYCK G ++ A ++++ M
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++ P TY+ + K G ++ A L +KM++ G PD +TY L++ LC+E +L
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A ++ + M G D T T LI C+ ++A + ++MIR+G++P +T+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 361 NDEFKKRGMTALAQKL 376
+ K T A +L
Sbjct: 510 INGLSKSARTKEAHRL 525
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 144/282 (51%), Gaps = 6/282 (2%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+AP+V YN +L ++ A RF M + V PNV TY LV C R++ A
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSL 220
+ +V +MR G PNA+ YNT++ AG + ++ L+ E G P +VT+ S+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS--LMREEGNAKPNLVTFNSM 229
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
V G CKAG +EGA K+ M+ G P +YN + K G + +++ ++ +M + G
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD +T+ L+ CK L+ A+ + +M+ RG ++ T T LI C+ D+A
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
E+M + G+ P + + L + + K G LA++L M +
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 391
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 167/336 (49%), Gaps = 9/336 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+R G +E A+ N A + L+ + C+ G + A
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPN----AVTYNTLVAAFCRAGELDGAERV 209
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+E + + P + +N ++NG ++ ++ A + + EM +E + P+VV+Y TL+ GY
Sbjct: 210 VSLMRE-EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ + ++ + EM + G+ P+ + + ++I +AG E+ ++ + E G M
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR--ERGLRM 326
Query: 215 --VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VT+T+L+ G+CK G L+ A ++ M G PS YN + K G+++ A L
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M PD +TY ++ CK LD A Q++++M +G D T + LI LC
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ ++A FE+M++ G+ P T+ L D K G
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 19/384 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ +A E D A ++ L + G+ P+ V TF ++ +AG +E A F+
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLV---TFNSMVNGLCKAGRMEGARKVFD-- 247
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+MV+ + LL CK G + + F + + + P V + L++
Sbjct: 248 ---EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ--RGLVPDVVTFTSLIHA 302
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++ N++ A +MR+ + N VT+ L++G+C+ +D A+ V+EMRK GI+P+
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YN +I+G + GR + ++ P +VTY++++ GYCK G+L+ A ++ +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ +G LP TY+ R + ++ DA L+ M++ G PD TY L+ CKE
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ A+ + EM +G D+ T ++LI+ L + + EA + VP + +
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 542
Query: 359 RL-----NDEFKKRGMTALAQKLC 377
L EFK + AL + C
Sbjct: 543 ALMLCCSKAEFKS--VVALLKGFC 564
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 24/362 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V TF LI +AG +E A+ + N F L+D CK+G
Sbjct: 290 VPDVV---TFTSLIHATCKAGNLEQAVALVAQMRERGLRMN----EVTFTALIDGFCKKG 342
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + ++ P+V YN L+NG+ + + A EM + V P+VVT
Sbjct: 343 FLDDALLAVEEMRKC--GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ GYC++ +D A +L ++M K+G+ P+AI Y+++I GL E R + + E L
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYT+L+ G+CK G++E A + MI +G LP TY+ SK + +
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520
Query: 267 DAMNLYRKMIESGYTPDRLTYHIL---------------LKILCKEDKLDLAIQVSKEMK 311
+A L K+ PD + Y L LK C + + A +V + M
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
R +D ++LIH CR +A + + M+R G P+ + L + GM
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640
Query: 372 LA 373
A
Sbjct: 641 EA 642
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 25/297 (8%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ CK G + +A + +K L + P Y+ L+ G K + DA +
Sbjct: 401 YSTIISGYCKVGNLDSAFQL--NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFEN 458
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P+ TY TL++G+C+ V++A+ L EM ++G+ P+ + Y+ +I+GL ++ R
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 195 FEEVSGMMERFLVCEPGPTMVTY---------------TSLVKGYCKAGDLEGASKILKM 239
+E ++ + +P P + Y +L+KG+C G ++ A K+ +
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED- 298
M+ R + + Y+ + G V A++ +++M+ SG++P+ + L++ L +E
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 299 --KLDLAIQVSKEMKCRGCDI-DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ D AIQ + C C + D + S LI L + D M R GL+P
Sbjct: 639 VVEADNAIQ--DLLTC--CPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 109/298 (36%), Gaps = 59/298 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K DSA+ L + +PD + T+ LIR + A FE N
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAI---TYSSLIRGLCEEKRLNDACELFE--N 458
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + D + L+D CK+G V+ A + + + P V Y++L+NG
Sbjct: 459 MLQLGVQPDEFT--YTTLIDGHCKEGNVEKALSLHDEM--IRKGVLPDVVTYSVLINGLS 514
Query: 121 RSKNVKDAERFWLEMRKENVTPNVV----------------------------------- 145
+S K+A R ++ E+ P+ +
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574
Query: 146 ---------------TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
Y L+ G+CR V +A+ K+M + G PN+ +++ GL
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
E G E ++ L C P +L+ K G+++ +L M G LPS
Sbjct: 635 EEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 15/362 (4%)
Query: 8 AKEFDSAWCL-LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K + W + +L++ G VPD + T+ +LI Y ++G ++ A+ + N V
Sbjct: 106 GKTKKATWVMEILEQSGA--VPDVI---TYNVLISGYCKSGEIDNALQVLDRMNVAPDVV 160
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+++ +L +LC G++K A E + +L + P V Y IL+ + V
Sbjct: 161 TYNT-------ILRTLCDSGKLKQAMEVLDR--QLQKECYPDVITYTILIEATCKESGVG 211
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + EMR + P+VVTY L+ G C+ R+D AI+ + M G +PN I +N ++
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ GR+ + ++ L P++VT+ L+ C+ G L A IL+ M G
Sbjct: 272 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 331
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ +YN F K K++ A+ M+ G PD +TY+ LL LCK+ K+D+A+++
Sbjct: 332 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 391
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++ +GC L T +I L ++ K + A ++M R+GL P +T+ L +
Sbjct: 392 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451
Query: 367 RG 368
G
Sbjct: 452 EG 453
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 12/379 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ L + E + + L + ++PD + + LIR + R G + A W E
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTS---LIRGFCRIGKTKKATWVMEILEQ 120
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
V + + + +L+ CK G + A + + + AP V YN +L
Sbjct: 121 SGAVPDVIT----YNVLISGYCKSGEIDNALQVLDR-----MNVAPDVVTYNTILRTLCD 171
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S +K A ++ P+V+TY L+E C+ V +A++L+ EMR +G +P+ +
Sbjct: 172 SGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 231
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I+G+ + GR +E + P ++T+ +++ C G A K+L M+
Sbjct: 232 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 291
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+G PS T+N + + G + A+++ KM G TP+ L+Y+ LL CKE K+D
Sbjct: 292 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 351
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI+ M RGC D+ T L+ LC+ K D A + +G P +T+ +
Sbjct: 352 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 411
Query: 362 DEFKKRGMTALAQKLCNVM 380
D K G T A KL + M
Sbjct: 412 DGLSKVGKTERAIKLLDEM 430
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 178/360 (49%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K+ E D+A +LD++ + PD V+ +T ++R +G ++ A+ +
Sbjct: 133 LISGYCKSGEIDNAL-QVLDRM--NVAPDVVTYNT---ILRTLCDSGKLKQAMEVLDR-- 184
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + IL+++ CK+ V A + + + ++ P V YN+L+NG
Sbjct: 185 --QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR--NKGSKPDVVTYNVLINGIC 240
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A +F M PNV+T+ ++ C R A +L+ +M ++G P+ +
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N +I+ L G ++E+ + P ++Y L+ G+CK ++ A + L +M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+SRG P TYN K GKV+ A+ + ++ G +P +TY+ ++ L K K
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ AI++ EM+ +G D+ T + L+ L R K DEA F D+ G+ P+ +T+ +
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 175/382 (45%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L + + A +L ++ PD + T+ ILI + V A+ +
Sbjct: 165 ILRTLCDSGKLKQAMEVLDRQLQKECYPDVI---TYTILIEATCKESGVGQAMKLLDEMR 221
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + +L++ +CK+GR+ A ++ + P V +NI+L
Sbjct: 222 N----KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY--GCQPNVITHNIILRSMC 275
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ DAE+ +M ++ +P+VVT+ L+ CR + RAI ++++M G PN++
Sbjct: 276 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 335
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN ++ G + + + ++ + P +VTY +L+ CK G ++ A +IL +
Sbjct: 336 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 395
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S+G P TYN SK GK E A+ L +M G PD +TY L+ L +E K+
Sbjct: 396 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 455
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D AI+ +++ G + T ++ LC+ + D A MI + P T+ L
Sbjct: 456 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 515
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ G+ A L N + S
Sbjct: 516 IEGIAYEGLAKEALDLLNELCS 537
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 9/324 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LI + G ++ AI +F NN+ I+L S+C GR
Sbjct: 227 PDVV---TYNVLINGICKEGRLDEAI---KFLNNMPSY-GCQPNVITHNIILRSMCSTGR 279
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A + L + +P+V +NIL+N R + A +M TPN ++Y
Sbjct: 280 WMDAEKLLSDM--LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 337
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G+C+ +++DRAI + M G P+ + YNT++ L + G+ + ++ +
Sbjct: 338 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 397
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +++ G K G E A K+L M +G P TY+ S+ GKV++
Sbjct: 398 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 457
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ + + G P+ +TY+ ++ LCK + D AI M + C T T+LI
Sbjct: 458 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 517
Query: 328 LLCRMYKFDEASAEFEDMIRRGLV 351
+ EA ++ RGLV
Sbjct: 518 GIAYEGLAKEALDLLNELCSRGLV 541
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 38/311 (12%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + L+ G+ R K A + + P+V+TY L+ GYC+ +D A+++
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK---- 222
+ M + P+ + YNT++ L ++G+ ++ +++R L E P ++TYT L++
Sbjct: 150 LDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 223 -------------------------------GYCKAGDLEGASKILKMMISRGFLPSPTT 251
G CK G L+ A K L M S G P+ T
Sbjct: 207 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 266
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N R G+ DA L M+ G +P +T++IL+ LC++ L AI + ++M
Sbjct: 267 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 326
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
GC + + L+H C+ K D A + M+ RG P +T+ L K G
Sbjct: 327 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 386
Query: 372 LAQKLCNVMSS 382
+A ++ N +SS
Sbjct: 387 VAVEILNQLSS 397
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
LV G E+ +E + P ++ TSL++G+C+ G + A+ +++++ G +P
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN + K G++++A+ + +M PD +TY+ +L+ LC KL A++V
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ C D+ T T+LI C+ +A ++M +G P +T+ L + K G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 369 MTALAQKLCNVMSS 382
A K N M S
Sbjct: 244 RLDEAIKFLNNMPS 257
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 188/378 (49%), Gaps = 13/378 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LL D + VPD V T+ LI G VE A+ F A K ++
Sbjct: 312 LLKDAVFKGFVPDQV---TYCSLINGLCAEGDVERALELFNEAQ----AKGIKPDIVVYN 364
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ LC QG + A + ++ E + P ++ YNI++NG + N+ DA +
Sbjct: 365 SLVKGLCLQGLILHALQVMNEMAE--EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 422
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ P+V T+ TL++GYC+ ++D A++LV+ M + GI P+ I YN+V++GL +AG+
Sbjct: 423 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 482
Query: 197 EVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EV+ + ++ C P P +TY L++ +C++ +E ASK++ M G P ++N
Sbjct: 483 EVNETFQEMILKGCHPNP--ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 540
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G +E A L++K+ E GY+ T++ L+ + + +A ++ EM +G
Sbjct: 541 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 600
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T +LI C+ D A +MI++G +P TF R+ + A
Sbjct: 601 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 660
Query: 375 KLCNVMSSVPRSMELLDS 392
+ ++M + E++D+
Sbjct: 661 GIIHIMVKIGVVPEVVDT 678
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK+ + A Y R+ ++Q P YN +++G+ + V++A +
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYL--RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 315
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ P+ VTY +L+ G C V+RA+ L E + +GI+P+ +VYN+++ GL G
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 375
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+M P + TY ++ G CK G++ A+ ++ I +G+LP T+N
Sbjct: 376 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 435
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K K++ A+ L +M E G PD +TY+ +L LCK K++ + +EM +G
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 495
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C + T +LI CR K +EAS M + GL P ++F L F + G
Sbjct: 496 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 549
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 3/297 (1%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
GA + ++ L G A + F + L P + +N +L+ + +V +A
Sbjct: 150 GAVAYCTVVCGLYAHGHTHDARQLFDQM--LHTHVFPNLAAFNKVLHALCKRGDVLEAGL 207
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
++ + ++ N+ TY + G C R+ A+RLV MR + P+ + YNT+I GL
Sbjct: 208 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLC 266
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ +E + R + P TY +++ GYCK ++ A+++LK + +GF+P
Sbjct: 267 KKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV 326
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY G VE A+ L+ + G PD + Y+ L+K LC + + A+QV EM
Sbjct: 327 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 386
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
GC D+ T ++I+ LC+M +A+ D I +G +P TF L D + KR
Sbjct: 387 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 443
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 7/295 (2%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ GR++ A + F + + P YN +++ + A + ++ M V+P+
Sbjct: 62 RAGRLRDAVDAFERMDLF--ACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 119
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+ T+ + +C R A+RL++ + G A+ Y TV+ GL G + + +
Sbjct: 120 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 175
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L P + + ++ CK GD+ A +L +I RG + TYN + R + G
Sbjct: 176 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 235
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++ +A+ L M + PD +TY+ L++ LCK+ A+ + M +GC D T
Sbjct: 236 RLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 294
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+I C++ EA+ +D + +G VP +T+ L + G A +L N
Sbjct: 295 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 176/362 (48%), Gaps = 26/362 (7%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF---------------EILLDSLC 83
L ++ +G+ + + + L M +FD LF +++D+ C
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+G ++ A + +K ++ P V YN +++G +S V++A + EM + TPN
Sbjct: 405 KRGMLEEACDLI--KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 462
Query: 144 VVTYGTLVEGYCRLRRVDRA---------IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
++ T++ G C+ ++D+A RL+K M +G P+ + Y+T+I GL R
Sbjct: 463 RRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 522
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++E + + PT+VT +L+ G CKAG ++ A ++L M+S G P TYN
Sbjct: 523 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 582
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G+ E A L M+ G P+ +TY L+ LCK ++L A V +MK G
Sbjct: 583 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 642
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C +L T T LI C + D F +M+ G+ P ++ + L E K G +A A
Sbjct: 643 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 702
Query: 375 KL 376
++
Sbjct: 703 EI 704
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 21/330 (6%)
Query: 78 LLDSLCKQGRVKAASEYFHKRK----ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+LD LCK GRV+ A F R+ S P++R YNI++ G ++ + +A + +
Sbjct: 253 VLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFE 312
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + NV+P+ +YG L++G + +++ A L +++ G+ P+ + Y ++I GL A
Sbjct: 313 KMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 372
Query: 194 RFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
F++ + M R C P P VTY ++ CK G LE A ++K MI G +P
Sbjct: 373 SFDDARELFADMNRRG--CPPSP--VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDV 428
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ---- 305
TYN K +VE+A+ L+ +M G TP+R +++ ++ LC++ K+D A Q
Sbjct: 429 VTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKL 488
Query: 306 -----VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ K M G D+ T + LI LC + + D+A EDM++R P +T L
Sbjct: 489 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 548
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
K G A+++ + M S +S +++
Sbjct: 549 IHGLCKAGRIKEAREVLDAMVSSGQSPDVV 578
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 151/301 (50%), Gaps = 17/301 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+LL+ C +G+V A E R D+ AP Y +L+G ++ V++A R + +
Sbjct: 215 LNVLLEGFCSRGQVDKARELL--RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD 272
Query: 135 ------MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ P++ Y ++ G C+ R+D A+++ ++M + + P++ Y +IDG
Sbjct: 273 RELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDG 332
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L +AG+ + + ++ L P+ V YTSL+ G C A + A ++ M RG PS
Sbjct: 333 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 392
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
P TYN K G +E+A +L +KMIE G+ PD +TY+ ++ LCK +++ A+ +
Sbjct: 393 PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 452
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE---------FEDMIRRGLVPHYLTFKR 359
EM+ GC + + +I LC+ K D+A + M G VP +T+
Sbjct: 453 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYST 512
Query: 360 L 360
L
Sbjct: 513 L 513
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 168/386 (43%), Gaps = 52/386 (13%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + ++ A+ FE N +N + + IL+D L K G++ A F
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNE----RNVSPDSWSYGILIDGLAKAGKLNDARNLF 346
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
K L P+ Y L++G + + DA + +M + P+ VTY +++ C
Sbjct: 347 QKL--LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPG- 211
+ ++ A L+K+M ++G P+ + YNTV+DGL ++ R EE + MER L C P
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER-LGCTPNR 463
Query: 212 -----------------------------------------PTMVTYTSLVKGYCKAGDL 230
P +VTY++L+ G C +
Sbjct: 464 RSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 523
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A +L+ M+ R P+ T N K G++++A + M+ SG +PD +TY+ L
Sbjct: 524 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 583
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C+ + + A ++ +M RG ++ T T L+ LC+ + EA F M G
Sbjct: 584 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 643
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
P+ T+ L F G KL
Sbjct: 644 APNLFTYTALILGFCSAGQVDGGLKL 669
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 142/314 (45%), Gaps = 10/314 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI K + A L+ I VPD V+ +T + + + +R VE A+ F
Sbjct: 399 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR---VEEALLLFNEME 455
Query: 61 NLDMVKNFDSGASLFEIL-----LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
L N S ++ L +D C++G++ A ++ D P V Y+ L
Sbjct: 456 RLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLL--KRMTDDGHVPDVVTYSTL 513
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++G V DA +M K P VVT TL+ G C+ R+ A ++ M G
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT++ G AG+ E ++ + P +VTYT+LV G CKA L A
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M S G P+ TY F G+V+ + L+ +M+ +G +PD + Y L LC
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 693
Query: 296 KEDKLDLAIQVSKE 309
K + A+++ +E
Sbjct: 694 KSGRSARALEILRE 707
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 173/382 (45%), Gaps = 22/382 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KA + D A L++D++ +P + + +F L G +E A E
Sbjct: 89 LCKAGKMDEAE-LVMDEMRSRMIPPYFATSSF--LAHELCLRGSMERAFQLLEIMP---- 141
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
V N +S + I++ +LCK RV A E E A + +L G S
Sbjct: 142 VAN----SSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGS--LDSVLVGLMDSGR 195
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +A + + E R+E P +VT L+EG+C +VD+A L++ M E P+ + Y T
Sbjct: 196 IDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCT 252
Query: 185 VIDGLVEAGRFEEVSGMM-ERFLVCEPGPTMVT-----YTSLVKGYCKAGDLEGASKILK 238
V+DGL +AGR EE + +R L + Y ++ G C+ ++ A ++ +
Sbjct: 253 VLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFE 312
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M R P +Y +K GK+ DA NL++K++ SG TP + Y L+ LC +
Sbjct: 313 KMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 372
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ +M RGC T ++I C+ +EA + MI G VP +T+
Sbjct: 373 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 432
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
+ D K A L N M
Sbjct: 433 TVMDGLCKSSRVEEALLLFNEM 454
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 110/273 (40%), Gaps = 39/273 (14%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC RV A + + PTV N L++G ++ +K+A
Sbjct: 510 YSTLISGLCSIARVDDARHLLEDM--VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +P+VVTY TLV G+CR + +RA L+ +M G+ PN + Y ++ GL +A R
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E G+ + P + TYT+L+ G+C AG ++G K+ M+ G P Y
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687
Query: 255 FFRYFSK-------------------------------------FGKVEDAMNLYRKMIE 277
K GK+E A+ R M+
Sbjct: 688 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 747
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
G P L+ LCK + A V +E+
Sbjct: 748 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 149/400 (37%), Gaps = 107/400 (26%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF ++ C GR A + F +++ +P VYN+L++ + + + ++
Sbjct: 12 LFTSVIQGWCNVGRTFEAVKIFSL---MEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQ 68
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP---------------- 177
M P+ T+ T++ G C+ ++D A ++ EMR I P
Sbjct: 69 VMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRG 128
Query: 178 ---------------NAIVYNTVIDGLVEAGRFEE---------------VSGMMERFLV 207
N+ YN V+ L +A R ++ +G ++ LV
Sbjct: 129 SMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLV 188
Query: 208 --CEPG---------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G P +VT L++G+C G ++ A ++L+ M P
Sbjct: 189 GLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEV 248
Query: 251 TYNYFFRYFSKFGKVEDAMNL--------------------------------------- 271
+Y K G+VE+A+ L
Sbjct: 249 SYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAV 308
Query: 272 --YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ KM E +PD +Y IL+ L K KL+ A + +++ G T LIH L
Sbjct: 309 QMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL 368
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
C FD+A F DM RRG P +T+ + D KRGM
Sbjct: 369 CMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 122/312 (39%), Gaps = 54/312 (17%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ D A+ LL VPD V+ T + + AR V+ A E DMVK
Sbjct: 487 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR---VDDARHLLE-----DMVKRQC 538
Query: 70 SGASLFE-ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+ + L+ LCK GR+K A E QS P V YN L++G R+ + A
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS--PDVVTYNTLVHGHCRAGQTERA 596
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+M + PNVVTY LV G C+ R+ A + +M+ G PN Y +I G
Sbjct: 597 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 656
Query: 189 LVEAGRFEEVSGMMERF--LVCEP-GPTMVTYTSLVKGYCK------------------- 226
AG +V G ++ F +VC P V Y +L CK
Sbjct: 657 FCSAG---QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 713
Query: 227 ------------------AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
AG +E A ++ M+ G LP+P K G+ +A
Sbjct: 714 SEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 773
Query: 269 MNLYRKMIESGY 280
+ ++++ Y
Sbjct: 774 RAVLEEIMDLAY 785
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 17/275 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA A +L + + PD V+ +T L+ + RAG E A
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT---LVHGHCRAGQTERARELLS--- 601
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DMV + + L+ LCK R+ A F + K AP + Y L+ G+
Sbjct: 602 --DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS--SGCAPNLFTYTALILGF 657
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V + + EM ++P+ V YGTL C+ R RA+ +++E R E + A
Sbjct: 658 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR-ESLRSEA 716
Query: 180 ---IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
VY +DGL+EAG+ E G + + P SLV G CK+G A +
Sbjct: 717 WGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 776
Query: 237 LK--MMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
L+ M ++ G + K ++EDA+
Sbjct: 777 LEEIMDLAYGGKARGKAAKFVEEMVGKGYEIEDAV 811
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ + P + + ++++G+C + R A+++ M +E P VYN +ID L +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQE 59
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E V M++ + P T+T+++ G CKAG ++ A ++ M SR P T ++
Sbjct: 60 TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +E A L M + + Y+I++ LCK ++D A+++++ M +
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKR 175
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + ++ L + DEA + + R P +T L + F RG A+
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKAR 232
Query: 375 KLCNVM 380
+L M
Sbjct: 233 ELLRAM 238
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 8/304 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAAS---EYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+N D F IL+D+LCK+GR+ A KR E P + YN L+ G+
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-----KPDIVTYNALMEGYCSR 313
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+NV +A + M K + P+V+ Y L++GYC+ + VD A+ L KE+ + + P Y
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N++IDGL +GR V +++ P +VTY L+ CK G + A +L MM+
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+G P+ TYN + V A +++ +M++SG PD L Y++L+ CK + +D
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
AI + KEM+ + D+ + LI LC + + ++M G P +T+ L D
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 363 EFKK 366
F K
Sbjct: 554 AFCK 557
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 170/353 (48%), Gaps = 18/353 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ + +LI Y + MV+ A+ F+ N ++V S + L+D LC GR
Sbjct: 333 PDVLN---YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS----YNSLIDGLCNSGR 385
Query: 88 VKAASEYFHKRKELDQ----SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ H +K LD+ + P V YNIL++ + + +A + M K+ V PN
Sbjct: 386 IS------HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+VTY +++GYC V+ A + M K G+EP+ + YN +I+G + +E + +
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P + +Y SL+ G C G + ++L M G P TYN F K
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ A++L+R+++E G PD T H ++ LCK +KL +A K + GC ++ T T
Sbjct: 560 PFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+LI+ LC+ F EA M P +TF+ + +R T A+KL
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 180/368 (48%), Gaps = 11/368 (2%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS 73
A+ LL + P+ V TF +I + GM+ A+ +F NL + + +
Sbjct: 109 AFSLLATILKSGYQPNLV---TFNTIINGFCINGMIFKAL---DFCQNL-LAQGYLFDQF 161
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFW 132
+ L++ L K G++KAA H +E+++S P + +Y+ L++G + V DA
Sbjct: 162 TYGTLINGLSKNGQIKAA---LHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
++ + + + VTY +L++G C + R +L+ +M +E ++P+ +N +ID L +
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR E G++ P +VTY +L++GYC ++ A ++ M+ RG P Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + K V++AM L++++ P +Y+ L+ LC ++ ++ EM
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
D+ T +LI LC+ + EA M+++G+ P+ +T+ + D + R +
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458
Query: 373 AQKLCNVM 380
A+ + N M
Sbjct: 459 AKDIFNRM 466
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 8/335 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
TF ILI Y + F F+ ++K+ + F +++ C G + A +
Sbjct: 92 TFTILINCY-----FHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALD 146
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + L Q + Y L+NG ++ +K A EM K +V PN+V Y L++G
Sbjct: 147 FC--QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ V A+ L ++ + GI +A+ YN++IDG GR++EV+ ++ + + P
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ L+ CK G + A +L MM RG P TYN + V +A L+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M++ G PD L Y++L+ CK +D A+ + KE+ + + + LI LC
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ ++M P +T+ L D K G
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG 419
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 8/330 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
S+F+ LL ++ + G A F + + + +P++ + IL+N +F + A
Sbjct: 55 TSVFDKLLGAIVRMGHYPTAISLFTQLQS--KGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ K PN+VT+ T++ G+C + +A+ + + +G + Y T+I+GL +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ + +++ P +V Y++L+ G CK G + A + + RG L T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN G+ ++ L KM+ PD T++IL+ LCKE ++ A V M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT- 370
RG D+ T L+ C EA F M++RGL P L + L D + K M
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 371 ---ALAQKLC--NVMSSVPRSMELLDSRCK 395
L ++LC N++ ++ L+D C
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCN 382
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 18 LLDKI-GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LLD++ G + PD V T+ ILI + G + A+ M K +
Sbjct: 392 LLDEMHGSAQPPDVV---TYNILIDALCKEGRILEALGVLVMM----MKKGVKPNIVTYN 444
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++D C + V A + F++ + P + YN+L+NG+ +++ V +A + EMR
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRM--VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+N+ P++ +Y +L++G C L R+ L+ EM G P+ I YN ++D + F+
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + R +V P T ++V CK L+ A LK ++ G P+ TY
Sbjct: 563 KAISLF-RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILI 621
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +AM L KM ++ PD +T+ I++ +L + ++ D A ++ +EM RG
Sbjct: 622 NALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 46/289 (15%)
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD-------------------------- 161
+ RF+ + +N N CR R VD
Sbjct: 15 SSRFFGHFQPQNPHKN-----------CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLG 63
Query: 162 ---------RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
AI L +++ +GI P+ + +I+ ++ L P
Sbjct: 64 AIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQP 123
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+VT+ +++ G+C G + A + ++++G+L TY SK G+++ A++L
Sbjct: 124 NLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLL 183
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M +S P+ + Y L+ LCK+ + A+ + ++ RG +D T LI C +
Sbjct: 184 QEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSV 243
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ E + M+R + P TF L D K G AQ + +MS
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 170/354 (48%), Gaps = 32/354 (9%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------------------RKELDQ 103
+K F A + +++ LCK RV+ A E K K +D
Sbjct: 73 LKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDD 132
Query: 104 SWA-----------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+ A P +YN +L+G + + V++A + +M K+ + PNVVTY TL+
Sbjct: 133 ALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLIN 192
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C+ R++ A L KEM +G P + YNT+IDG + + ++ + P
Sbjct: 193 GLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVP 252
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+VTYT+L+ G K+G ++ A+++L M+ +G P+ TY+ F K +V++A L
Sbjct: 253 NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLL 312
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M+ G P +TY+ILL LC+ DKL+ A ++ + M R C + T L+ LC
Sbjct: 313 EQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHH 372
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRS 386
+ D A + +MI +G P +T+ L + G AQ+L M R+
Sbjct: 373 KQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 426
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 167/352 (47%), Gaps = 48/352 (13%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFH----------------------KRKELDQSWA-- 106
GA+ F + D K GR++ E + K D+++
Sbjct: 9 GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68
Query: 107 PTVRV---------YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
T+R+ Y+ ++N W N + R +E P+ +TYG +VE C+
Sbjct: 69 HTMRLKRFKRKAIAYSTIIN-WLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+R+D A+ V+EM GI+P+A +YN V+ GL + + EE + E+ + P +VTY
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ G CKA +E A ++ K M +G++P+ +YN F K + A +++ KM+
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
S P+ +TY L+ L K K+ A +V M +G ++ T + LI C++ + DE
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDE 307
Query: 338 ASAEFEDMIRRGLVPHYLTFK----------RLNDEFKK-RGMTALAQKLCN 378
A E M+ +G+ P +T+ +L D FK RGM AQ+ C+
Sbjct: 308 AHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM---AQRRCH 356
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 7/295 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +N + +G+ ++ ++ + + M + T YG L+ C++ D A +L
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ MR + + AI Y+T+I+ L + R EE ++E+ P P +TY +V+ CK
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCK 126
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
++ A ++ M +RG P YN+ + KVE+A L+ KM++ P+ +T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LCK +++ A ++ KEM +G + LI C+ A F+ M+
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN------VMSSVPRSMELLDSRCK 395
R VP+ +T+ L D K G A ++ + V +V L+D CK
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD-MVK-NFDSGASLFEILLDSLCK 84
VP+ V T+ LI +++G V+AA A LD MVK + + L+D CK
Sbjct: 251 VPNVV---TYTTLIDGLSKSGKVQAA------AEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
RV A + + + Q APTV YNILLN R+ ++DA + + M + P V
Sbjct: 302 VRRVDEAHKLLEQM--VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
VTY TL+ C +++D A RL EM +G P+AI Y+T+ GL AG+ E +ME+
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419
Query: 205 FLVCEPGP 212
+ + P
Sbjct: 420 MKLTKRNP 427
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M R +P T+N F+K G++E +Y+ M+E+GYT Y IL+ LCK
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D A ++ M+ + + +I+ LC++ + +EA E M R P LT+
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTY 117
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 15/362 (4%)
Query: 8 AKEFDSAWCL-LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K + W + +L++ G VPD + T+ +LI Y ++G ++ A+ + N V
Sbjct: 163 GKTKKATWVMEILEQSGA--VPDVI---TYNVLISGYCKSGEIDNALQVLDRMNVAPDVV 217
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+++ +L +LC G++K A E + +L + P V Y IL+ + V
Sbjct: 218 TYNT-------ILRTLCDSGKLKQAMEVLDR--QLQKECYPDVITYTILIEATCKESGVG 268
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + EMR + P+VVTY L+ G C+ R+D AI+ + M G +PN I +N ++
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 328
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ GR+ + ++ L P++VT+ L+ C+ G L A IL+ M G
Sbjct: 329 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 388
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ +YN F K K++ A+ M+ G PD +TY+ LL LCK+ K+D+A+++
Sbjct: 389 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 448
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++ +GC L T +I L ++ K + A ++M R+GL P +T+ L +
Sbjct: 449 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508
Query: 367 RG 368
G
Sbjct: 509 EG 510
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 12/379 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ L + E + + L + ++PD + + LIR + R G + A W E
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTS---LIRGFCRIGKTKKATWVMEILEQ 177
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
V + + + +L+ CK G + A + + + AP V YN +L
Sbjct: 178 SGAVPDVIT----YNVLISGYCKSGEIDNALQVLDR-----MNVAPDVVTYNTILRTLCD 228
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S +K A ++ P+V+TY L+E C+ V +A++L+ EMR +G +P+ +
Sbjct: 229 SGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 288
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I+G+ + GR +E + P ++T+ +++ C G A K+L M+
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 348
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+G PS T+N + + G + A+++ KM G TP+ L+Y+ LL CKE K+D
Sbjct: 349 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 408
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI+ M RGC D+ T L+ LC+ K D A + +G P +T+ +
Sbjct: 409 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 468
Query: 362 DEFKKRGMTALAQKLCNVM 380
D K G T A KL + M
Sbjct: 469 DGLSKVGKTERAIKLLDEM 487
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 178/360 (49%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K+ E D+A +LD++ + PD V+ +T ++R +G ++ A+ +
Sbjct: 190 LISGYCKSGEIDNAL-QVLDRM--NVAPDVVTYNT---ILRTLCDSGKLKQAMEVLDR-- 241
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + IL+++ CK+ V A + + + ++ P V YN+L+NG
Sbjct: 242 --QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR--NKGSKPDVVTYNVLINGIC 297
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A +F M PNV+T+ ++ C R A +L+ +M ++G P+ +
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N +I+ L G ++E+ + P ++Y L+ G+CK ++ A + L +M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+SRG P TYN K GKV+ A+ + ++ G +P +TY+ ++ L K K
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ AI++ EM+ +G D+ T + L+ L R K DEA F D+ G+ P+ +T+ +
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 175/382 (45%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L + + A +L ++ PD + T+ ILI + V A+ +
Sbjct: 222 ILRTLCDSGKLKQAMEVLDRQLQKECYPDVI---TYTILIEATCKESGVGQAMKLLDEMR 278
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + +L++ +CK+GR+ A ++ + P V +NI+L
Sbjct: 279 N----KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY--GCQPNVITHNIILRSMC 332
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ DAE+ +M ++ +P+VVT+ L+ CR + RAI ++++M G PN++
Sbjct: 333 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN ++ G + + + ++ + P +VTY +L+ CK G ++ A +IL +
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 452
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S+G P TYN SK GK E A+ L +M G PD +TY L+ L +E K+
Sbjct: 453 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 512
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D AI+ +++ G + T ++ LC+ + D A MI + P T+ L
Sbjct: 513 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 572
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ G+ A L N + S
Sbjct: 573 IEGIAYEGLAKEALDLLNELCS 594
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 9/324 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LI + G ++ AI +F NN+ I+L S+C GR
Sbjct: 284 PDVV---TYNVLINGICKEGRLDEAI---KFLNNMPSY-GCQPNVITHNIILRSMCSTGR 336
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A + L + +P+V +NIL+N R + A +M TPN ++Y
Sbjct: 337 WMDAEKLLSDM--LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 394
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G+C+ +++DRAI + M G P+ + YNT++ L + G+ + ++ +
Sbjct: 395 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 454
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +++ G K G E A K+L M +G P TY+ S+ GKV++
Sbjct: 455 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 514
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ + + G P+ +TY+ ++ LCK + D AI M + C T T+LI
Sbjct: 515 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 574
Query: 328 LLCRMYKFDEASAEFEDMIRRGLV 351
+ EA ++ RGLV
Sbjct: 575 GIAYEGLAKEALDLLNELCSRGLV 598
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 38/303 (12%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+ G+ R K A + + P+V+TY L+ GYC+ +D A++++ M
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN--- 211
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK------------ 222
+ P+ + YNT++ L ++G+ ++ +++R L E P ++TYT L++
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271
Query: 223 -----------------------GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
G CK G L+ A K L M S G P+ T+N R
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
G+ DA L M+ G +P +T++IL+ LC++ L AI + ++M GC +
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
+ L+H C+ K D A + M+ RG P +T+ L K G +A ++ N
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 380 MSS 382
+SS
Sbjct: 452 LSS 454
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
LV G E+ +E + P ++ TSL++G+C+ G + A+ +++++ G +P
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN + K G++++A+ + +M PD +TY+ +L+ LC KL A++V
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ C D+ T T+LI C+ +A ++M +G P +T+ L + K G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 369 MTALAQKLCNVMSS 382
A K N M S
Sbjct: 301 RLDEAIKFLNNMPS 314
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 177/350 (50%), Gaps = 9/350 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ V+ +T LI Y + G ++ A + ++ M N S + ++++ LC++G
Sbjct: 246 LPNVVTYNT---LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS----YNVIINGLCREG 298
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+K A E + + + P YN LLNG+ + N A EM + V+P+VVT
Sbjct: 299 SMKEAWEILEEMGY--KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 356
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ C+ R ++RA+ +MR G+ PN Y T+IDG G E ++
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P++VTY + + G+C +E A +++ M+ +G P +Y+ F + G+++
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + ++M+E G +PD +TY L++ LC+ +L A +S+EM G D T T LI
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ C ++A ++MI +G +P +T+ L + K+ T A++L
Sbjct: 537 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 4/293 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK-NVK 126
++S +++F++++ S + A + K + P V YN +L+ RS+ +VK
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAK--SSGFMPGVLSYNSVLDAIVRSRGSVK 195
Query: 127 -DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
AE + EM + V+PNV TY L+ G+C + + + + EM + G PN + YNT+
Sbjct: 196 LSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTL 255
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
ID + GR +E G+++ P +++Y ++ G C+ G ++ A +IL+ M +GF
Sbjct: 256 IDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF 315
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TYN + K G A+ ++ +M+ +G +P +TY L+ +CK L+ A++
Sbjct: 316 TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME 375
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+M+ RG + T T LI R +EA +M G P +T+
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 428
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 180/382 (47%), Gaps = 16/382 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K D A+ LL P+ +S + ++I R G ++ A E
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS---YNVIINGLCREGSMKEAWEILEEMG 311
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K F + LL+ CK+G A + + +P+V Y L+N
Sbjct: 312 ----YKGFTPDEVTYNTLLNGYCKEGNFHQA--LVIHAEMVRNGVSPSVVTYTALINSMC 365
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++N+ A F+ +MR + PN TY TL++G+ R ++ A R++ EM + G P+ +
Sbjct: 366 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 425
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN I G R EE G+++ + P +V+Y++++ G+C+ G+L+ A ++ + M
Sbjct: 426 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G P TY+ + + ++ +A +L ++M++ G PD TY L+ C E L
Sbjct: 486 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 545
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+ + EM +G D T ++LI+ L + + EA +I VP +T+ L
Sbjct: 546 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605
Query: 361 -----NDEFKKRGMTALAQKLC 377
N EFK + AL + C
Sbjct: 606 IENCSNIEFKS--VVALIKGFC 625
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 27/398 (6%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K F A + + + P V T+ LI +A + A+ EF + + ++
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSPSVV---TYTALINSMCKARNLNRAM---EFFDQMR-IR 383
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+ L+D +QG + A ++ E ++P+V YN ++G + ++
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE--SGFSPSVVTYNAFIHGHCVLERME 441
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A EM ++ + P+VV+Y T++ G+CR +DRA ++ +EM ++G+ P+A+ Y+++I
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
GL E R E + + L P TYT+L+ YC GDL A + MI +GFL
Sbjct: 502 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 561
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL--------------- 291
P TY+ +K + +A L K+I P +TY L+
Sbjct: 562 PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALI 621
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
K C + + A +V + M R ++IH CR +A +++MI G V
Sbjct: 622 KGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFV 681
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
PH +T L K GM +++ V+ RS L
Sbjct: 682 PHTVTVITLIKALFKEGMN---EEMSEVIGDTLRSCRL 716
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 28/329 (8%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
A L + + SG+S+F+ L DS +H + + V+++++
Sbjct: 111 LAQELALSASDPSGSSIFQCLKDS-------------YH-------VYNSSSAVFDLMVK 150
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR--AIRLVKEMRKEGI 175
+ + A + P V++Y ++++ R R + A + +EM + +
Sbjct: 151 SYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRV 210
Query: 176 EPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
PN YN +I G G ++ G MER P +VTY +L+ YCK G ++
Sbjct: 211 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL---PNVVTYNTLIDAYCKMGRIDE 267
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A +LK M S+G P+ +YN + G +++A + +M G+TPD +TY+ LL
Sbjct: 268 AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 327
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
CKE A+ + EM G + T T LI+ +C+ + A F+ M RGL P
Sbjct: 328 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 387
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ T+ L D F ++G+ A ++ N M+
Sbjct: 388 NERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 19/295 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ C++G + A + K++ +++ +P Y+ L+ G + + +A E
Sbjct: 462 YSTIISGFCRKGELDRAFQM--KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQE 519
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ TY TL+ YC +++A+ L EM +G P+A+ Y+ +I+GL + R
Sbjct: 520 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 579
Query: 195 FEEVSGMMERFLVCEPGPTMVTY---------------TSLVKGYCKAGDLEGASKILKM 239
E ++ + + E P+ VTY +L+KG+C G + A ++ +
Sbjct: 580 TREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFES 639
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ R P YN + G + A NLY++MI SG+ P +T L+K L KE
Sbjct: 640 MVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGM 699
Query: 300 LDLAIQVSKEMKCRGCDID-LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+ +V + R C ++ + + +L+ + + + DM + GL+P+
Sbjct: 700 NEEMSEVIGD-TLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 37/165 (22%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF-GKVE-DAMNLYRKMIE 277
+VK Y ++ A + + S GF+P +YN + G V+ A +YR+MI
Sbjct: 148 MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR 207
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
S +P+ TY+IL++ C +L K GC
Sbjct: 208 SRVSPNVYTYNILIRGFCSVGELQ---------KGLGC---------------------- 236
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
F +M R G +P+ +T+ L D + K G A L MSS
Sbjct: 237 ----FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 197/391 (50%), Gaps = 23/391 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D FV+LI Y +AG+V+ A+ F+
Sbjct: 160 IIEILGRASKLNHARCILLDMPNKGVQWD---EDLFVVLIESYGKAGIVQEAVKIFQKMK 216
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + ++ S +LF+ ++ ++GR A YF+ L++ P YN++L G+F
Sbjct: 217 ELGVERSVKSYDALFKEIM----RRGRYMMAKRYFNAM--LNEGIEPIRHTYNVMLWGFF 270
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S ++ A+RF+ +M+ ++P+VVTY T++ GYCR + ++ A + EM+ + I P I
Sbjct: 271 LSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVI 330
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V R ++ + E P +TY++L+ G C A L A KIL M
Sbjct: 331 SYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEM 390
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
++R F P + F R S K G ++ AM++ + MI + Y IL++ CK
Sbjct: 391 VTRHFAPKDNS--IFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKA 448
Query: 298 DKLDLAIQ-----VSKEMKCR---GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
D A++ V KE+ R +++ ++I LC + +A F ++++G
Sbjct: 449 GMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG 508
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + F L K G LA ++ +M
Sbjct: 509 -IQDEVAFNNLIRGHAKEGNPDLAFEMLKIM 538
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 140/364 (38%), Gaps = 89/364 (24%)
Query: 53 IWTFEFANNLDMVKNF-----DSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQ 103
+W F + L+ K F G S + +++ C+ ++ A ++F + K +
Sbjct: 266 LWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMK--GK 323
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV--- 160
+ APTV Y ++ G+ DA R + EM+ PN +TY TL+ G C ++
Sbjct: 324 NIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEA 383
Query: 161 ---------------------------------DRAIRLVKEMRKEGIEPNAIVYNTVID 187
D A+ ++K M + I A Y +I+
Sbjct: 384 RKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIE 443
Query: 188 GLVEAGRFEEVSGMMERFL-------------------------VCEPGPT--------- 213
+AG +++ ++E + +C G T
Sbjct: 444 NCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQ 503
Query: 214 --------MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
V + +L++G+ K G+ + A ++LK+M RG +Y + + G+
Sbjct: 504 LLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEP 563
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA MIE+G++PD + +++ L + ++ A +V M +G +LD +
Sbjct: 564 ADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKI 623
Query: 326 IHLL 329
+ L
Sbjct: 624 LEAL 627
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 112 YNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
+N++ N +K + A F W+E R + T+ ++E R +++ A ++ +
Sbjct: 121 HNLVYNVLHAAKKSEHALNFFRWVE-RAGLFQHDRETHFKIIEILGRASKLNHARCILLD 179
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M +G++ + ++ +I+ +AG +E + ++ ++ +Y +L K + G
Sbjct: 180 MPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGR 239
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A + M++ G P TYN F ++E A Y M G +PD +TY+
Sbjct: 240 YMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNT 299
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ C+ ++ A Q EMK + + + T +I + + D+A FE+M G
Sbjct: 300 MINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAG 359
Query: 350 LVPHYLTFKRL 360
P+ +T+ L
Sbjct: 360 EKPNDITYSTL 370
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 188/378 (49%), Gaps = 13/378 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LL D + VPD V T+ LI G VE A+ F A K ++
Sbjct: 315 LLKDAVFKGFVPDQV---TYCSLINGLCAEGDVERALELFNEAQ----AKGIKPDIVVYN 367
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ LC QG + A + ++ E + P ++ YNI++NG + N+ DA +
Sbjct: 368 SLVKGLCLQGLILHALQVMNEMAE--EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 425
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ P+V T+ TL++GYC+ ++D A++LV+ M + GI P+ I YN+V++GL +AG+
Sbjct: 426 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 485
Query: 197 EVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EV+ + ++ C P P +TY L++ +C++ +E ASK++ M G P ++N
Sbjct: 486 EVNETFQEMILKGCHPNP--ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNT 543
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G +E A L++K+ E GY+ T++ L+ + + +A ++ EM +G
Sbjct: 544 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 603
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T +LI C+ D A +MI++G +P TF R+ + A
Sbjct: 604 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 663
Query: 375 KLCNVMSSVPRSMELLDS 392
+ ++M + E++D+
Sbjct: 664 GIIHIMVKIGVVPEVVDT 681
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK+ + A Y R+ ++Q P YN +++G+ + V++A +
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYL--RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 318
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ P+ VTY +L+ G C V+RA+ L E + +GI+P+ +VYN+++ GL G
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 378
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+M P + TY ++ G CK G++ A+ ++ I +G+LP T+N
Sbjct: 379 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 438
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K K++ A+ L +M E G PD +TY+ +L LCK K++ + +EM +G
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C + T +LI CR K +EAS M + GL P ++F L F + G
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNG 552
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 3/297 (1%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
GA + ++ L G A + F + L P + +N +L+ + +V +A
Sbjct: 153 GAVAYCTVVCGLYAHGHTHDARQLFDQM--LHTHVFPNLAAFNKVLHALCKRGDVLEAGL 210
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
++ + ++ N+ TY + G C R+ A+RLV MR + P+ + YNT+I GL
Sbjct: 211 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLC 269
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ +E + R + P TY +++ GYCK ++ A+++LK + +GF+P
Sbjct: 270 KKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV 329
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY G VE A+ L+ + G PD + Y+ L+K LC + + A+QV EM
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 389
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
GC D+ T ++I+ LC+M +A+ D I +G +P TF L D + KR
Sbjct: 390 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 446
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 7/305 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ + + + GR++ A + F +R +L + P YN +++ + A + ++
Sbjct: 55 LYVASIRAYARAGRLRDAVDAF-ERMDL-FACPPAAPAYNAIMDALVDAAYHDQAHKVYV 112
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M V+P++ T+ + +C R A+RL++ + G A+ Y TV+ GL G
Sbjct: 113 RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHG 168
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + ++ L P + + ++ CK GD+ A +L +I RG + TYN
Sbjct: 169 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 228
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ R + G++ +A+ L M + PD +TY+ L++ LCK+ A+ + M +
Sbjct: 229 IWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
GC D T +I C++ EA+ +D + +G VP +T+ L + G A
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347
Query: 374 QKLCN 378
+L N
Sbjct: 348 LELFN 352
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 197/391 (50%), Gaps = 23/391 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D FV+LI Y +AG+V+ A+ F+
Sbjct: 160 IIEILGRASKLNHARCILLDMPNKGVQWD---EDLFVVLIESYGKAGIVQEAVKIFQKMK 216
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + ++ S +LF+ ++ ++GR A YF+ L++ P YN++L G+F
Sbjct: 217 ELGVERSVKSYDALFKEIM----RRGRYMMAKRYFNAM--LNEGIEPIRHTYNVMLWGFF 270
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S ++ A+RF+ +M+ ++P+VVTY T++ GYCR + ++ A + EM+ + I P I
Sbjct: 271 LSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVI 330
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V R ++ + E P +TY++L+ G C A L A KIL M
Sbjct: 331 SYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEM 390
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
++R F P + F R S K G ++ AM++ + MI + Y IL++ CK
Sbjct: 391 VTRHFAPKDNS--IFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKA 448
Query: 298 DKLDLAIQ-----VSKEMKCR---GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
D A++ V KE+ R +++ ++I LC + +A F ++++G
Sbjct: 449 GMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG 508
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + F L K G LA ++ +M
Sbjct: 509 -IQDEVAFNNLIRGHAKEGNPDLAFEMLKIM 538
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 140/364 (38%), Gaps = 89/364 (24%)
Query: 53 IWTFEFANNLDMVKNF-----DSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQ 103
+W F + L+ K F G S + +++ C+ ++ A ++F + K +
Sbjct: 266 LWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMK--GK 323
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV--- 160
+ APTV Y ++ G+ DA R + EM+ PN +TY TL+ G C ++
Sbjct: 324 NIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEA 383
Query: 161 ---------------------------------DRAIRLVKEMRKEGIEPNAIVYNTVID 187
D A+ ++K M + I A Y +I+
Sbjct: 384 RKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIE 443
Query: 188 GLVEAGRFEEVSGMMERFL-------------------------VCEPGPT--------- 213
+AG +++ ++E + +C G T
Sbjct: 444 NCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQ 503
Query: 214 --------MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
V + +L++G+ K G+ + A ++LK+M RG +Y + + G+
Sbjct: 504 LLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEP 563
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA MIE+G++PD + +++ L + ++ A +V M +G +LD +
Sbjct: 564 ADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKI 623
Query: 326 IHLL 329
+ L
Sbjct: 624 LEAL 627
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 112 YNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
+N++ N +K + A F W+E R + T+ ++E R +++ A ++ +
Sbjct: 121 HNLVYNVLHAAKKSEHALNFFRWVE-RAGLFQHDRETHFKIIEILGRASKLNHARCILLD 179
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M +G++ + ++ +I+ +AG +E + ++ ++ +Y +L K + G
Sbjct: 180 MPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGR 239
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A + M++ G P TYN F ++E A Y M G +PD +TY+
Sbjct: 240 YMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNT 299
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ C+ ++ A Q EMK + + + T +I + + D+A FE+M G
Sbjct: 300 MINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAG 359
Query: 350 LVPHYLTFKRL 360
P+ +T+ L
Sbjct: 360 EKPNDITYSTL 370
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V + LI + ++G V F+ +V +F + S+ + LC+ G+
Sbjct: 355 PDNV---VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM----IHGLCQAGK 407
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + F + L + P Y L++G+ ++ +K+A +M ++ +TPNVVTY
Sbjct: 408 VVEARKLFSEM--LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTY 465
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
LV+G C+ VD A L+ EM ++G++PN YN +I+GL + G E+ +ME +
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL 525
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +TYT+++ YCK G++ A ++L++M+ +G P+ T+N F G +ED
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLED 585
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L + M++ G P+ T++ L+K C + + I++ K M +G D +T +LI
Sbjct: 586 GERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK 645
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ EA ++M+ +G ++ L F KR A+KL
Sbjct: 646 GHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKL 694
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPDFV T+ +I +AG V A F + K + L+D CK G
Sbjct: 389 VPDFV---TYTSMIHGLCQAGKVVEARKLFSEM----LSKGLKPDEVTYTALIDGYCKAG 441
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+K A ++ E + P V Y L++G + V A EM ++ + PNV T
Sbjct: 442 EMKEAFSLHNQMVE--KGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G C++ +++A++L++EM G P+ I Y T++D + G + ++ L
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT+VT+ L+ G+C +G LE +++K M+ +G +P+ TT+N + + +
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ +Y+ M G PD TY+IL+K CK + A + KEM +G + + LI
Sbjct: 620 ATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLI 679
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLV 351
+ KF+EA FE+M G +
Sbjct: 680 KGFYKRKKFEEARKLFEEMRTHGFI 704
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 169/351 (48%), Gaps = 11/351 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
VS + + L+ + + + + EF N+ V ++ +++D C+ V+
Sbjct: 253 VSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYS-------VIVDGYCQ---VEQ 302
Query: 91 ASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+ +EL + P YN +++ ++ V +AE+ M+ + + P+ V Y T
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ G+ + V +L EM+++ I P+ + Y ++I GL +AG+ E + L
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P VTYT+L+ GYCKAG+++ A + M+ +G P+ TY K G+V+ A
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +M E G P+ TY+ L+ LCK ++ A+++ +EM G D T T ++
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C+M + +A M+ +GL P +TF L + F GM ++L M
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM 593
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 44/344 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A + A L + + PD V T+ LI Y +AG ++ A F N
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEV---TYTALIDGYCKAGEMKEA---FSLHN 451
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + K + L+D LCK G V A+E H+ E + P V YN L+NG
Sbjct: 452 QM-VEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE--KGLQPNVCTYNALINGLC 508
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N++ A + EM P+ +TY T+++ YC++ + +A L++ M +G++P +
Sbjct: 509 KVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIV 568
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPG------------------------- 211
+N +++G +G E+ + M+++ ++
Sbjct: 569 TFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGM 628
Query: 212 ------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P TY L+KG+CKA +++ A + K M+ +GF + +YN + F K K
Sbjct: 629 HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKF 688
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
E+A L+ +M G+ ++ Y I + + +E + +++ E
Sbjct: 689 EEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 3/317 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS-KN 124
K++ + +F++ L + G + A + F K L+ +V N+ L S
Sbjct: 175 KDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKL--LNYGVLVSVDSCNLFLARLSNSFDG 232
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
++ A R + E + V N V+Y ++ C+L +V A L+ +M G P+ + Y+
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++DG + + +V +ME P TY S++ CK G + A ++L++M ++
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P Y F K G V L+ +M PD +TY ++ LC+ K+ A
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ EM +G D T T LI C+ + EA + M+ +GL P+ +T+ L D
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472
Query: 365 KKRGMTALAQKLCNVMS 381
K G +A +L + MS
Sbjct: 473 CKCGEVDIANELLHEMS 489
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 6/243 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G +E A+ E +D+ F + + ++D+ CK G + A E
Sbjct: 499 TYNALINGLCKVGNIEQAVKLME---EMDLAGFFPDTIT-YTTIMDAYCKMGEMAKAHEL 554
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R LD+ PT+ +N+L+NG+ S ++D ER M + + PN T+ +L++ Y
Sbjct: 555 L--RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + I + K M +G+ P+ YN +I G +A +E + + + T
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+Y SL+KG+ K E A K+ + M + GF+ Y+ F + G E+ + L +
Sbjct: 673 ASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732
Query: 275 MIE 277
IE
Sbjct: 733 AIE 735
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFF-RYFSKFGKVEDAMNLYRKMIESGYTPDR 284
+AG L A K+ +++ G L S + N F R + F + A ++R+ E G +
Sbjct: 193 EAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNT 252
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
++Y+I+L +LC+ K+ A + +M+ RG D+ + ++++ C++ + + E+
Sbjct: 253 VSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEE 312
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ R+GL P+ T+ + K G A+++ VM +
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 175/372 (47%), Gaps = 42/372 (11%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
V TF ++I R++ G A+W F ++ + N + F +++ LCK+G +K
Sbjct: 238 VDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLIN----FTCMIEGLCKRGSIKQ 293
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGT 149
A E + + + W P V + L++G + + A R +L++ R EN PNV+TY
Sbjct: 294 AFEMLEEM--VGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTA 351
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ GYCR +++RA L+ M+++G+ PN Y T+IDG +AG FE +M
Sbjct: 352 MISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG 411
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + TY ++V G CK G ++ A K+L+ G P TYN K + A+
Sbjct: 412 FSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQAL 471
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDK------------------------------ 299
L+ KM++ G PD +Y L+ + C+E++
Sbjct: 472 ALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGY 531
Query: 300 -----LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
L LA++ + GC D T +I LC+ K DEA + ++ MI +GLVP
Sbjct: 532 CREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCE 591
Query: 355 LTFKRLNDEFKK 366
+T L E+ K
Sbjct: 592 VTRITLAYEYCK 603
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 166/422 (39%), Gaps = 108/422 (25%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N + + +++S + GR+K A E + +Q P R N ++ V
Sbjct: 129 RNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMH--NQGLVPNTRTLNWIIKVTSEMGLV 186
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV------------------------- 160
+ AE + EM V P+ ++Y +V YC++ +
Sbjct: 187 EYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLI 246
Query: 161 ----------DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL---- 206
RA+ + + G+EPN I + +I+GL + G ++ M+E +
Sbjct: 247 ISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGW 306
Query: 207 -------------VCEPG-------------------PTMVTYTSLVKGY---------- 224
+C+ G P ++TYT+++ GY
Sbjct: 307 KPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAE 366
Query: 225 -------------------------CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
CKAG+ E A ++ +M S GF P+ TYN
Sbjct: 367 MLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGL 426
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K G+V++A + ++G PD+ TY+IL+ CK++ + A+ + +M G D+
Sbjct: 427 CKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDI 486
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
+ T LI + CR + E+ FE+ +R G++P T+ + + + G LA K +
Sbjct: 487 HSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHR 546
Query: 380 MS 381
+S
Sbjct: 547 LS 548
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+VE + + R+ A+ +V EM +G+ PN N +I E G E + E V
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P ++Y +V YCK G++ A K L +M+ RGF+ T+ FS G A+
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+R++++ G P+ + + +++ LCK + A ++ +EM +G ++ T T LI L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320
Query: 330 C---------RMY---------------------------KFDEASAEFEDMIRRGLVPH 353
C R++ K + A M +GLVP+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T+ L D K G A L N+MSS
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSS 409
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 173/353 (49%), Gaps = 11/353 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ + G P V+ T +I+IR+Y V AI TF
Sbjct: 102 MISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDVARAINTFYAYK 161
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NF G F LL +LC+ V+ A K L + + +NI+LNGW
Sbjct: 162 QF----NFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNL---FPLDTKSFNIILNGWC 214
Query: 121 R-SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ AER W EM K + +VV+YG+++ Y + ++ + +R+ EM+K I P+
Sbjct: 215 NLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDR 274
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VYN VI L + +E ++ + P +VTY SL+K CKAG ++ A ++
Sbjct: 275 KVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQLFYE 334
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
++ R P+ T++ FFR E+ L KM E G P TY +L++ C+ +
Sbjct: 335 ILKRHLSPTIQTFHAFFRILR---TKEEVFELLDKMKELGCYPTIETYIMLMRKFCRWRQ 391
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LD ++ M+ G D + +LIH L K +EA + +M +G +P
Sbjct: 392 LDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQEKGFLP 444
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 193/376 (51%), Gaps = 8/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L + A ++ D G P+ V+ +T L+ + RAG ++ A
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT---LVAAFCRAGELDGAERVVSL-- 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N F +++ LCK GR++ A + F + + + AP V YN LL+G+
Sbjct: 213 -MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM--VREGLAPDVVSYNTLLSGYC 269
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + ++ + EM + + P+VVT+ +L+ C+ +++A+ LV +MR+ G+ N +
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +IDG + G ++ +E C P++V Y +L+ GYCK G ++ A ++++ M
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++ P TY+ + K G ++ A L +KM++ G PD +TY L++ LC+E +L
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A ++ + M G D T T LI C+ ++A + ++MIR+G++P +T+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 361 NDEFKKRGMTALAQKL 376
+ K T A +L
Sbjct: 510 INGLSKSARTKEAHRL 525
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 144/282 (51%), Gaps = 6/282 (2%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+AP+V YN +L ++ A RF M + V PNV TY LV C R++ A
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSL 220
+ +V +MR G PNA+ YNT++ AG + ++ L+ E G P +VT+ S+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVS--LMREEGNAKPNLVTFNSM 229
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
V G CKAG +EGA K+ M+ G P +YN + K G + +++ ++ +M + G
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD +T+ L+ CK L+ A+ + +M+ RG ++ T T LI C+ D+A
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
E+M + G+ P + + L + + K G LA++L M +
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 391
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 24/362 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V TF LI +AG +E A+ + N F L+D CK+G
Sbjct: 290 VPDVV---TFTSLIHATCKAGNLEQAVALVAQMRERGLRMN----EVTFTALIDGFCKKG 342
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + ++ P+V YN L+NG+ + + A EM + V P+VVT
Sbjct: 343 FLDDALLAVEEMRKC--GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ GYC++ +D A +L ++M K+G+ P+AI Y+++I GL E R + + E L
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYT+L+ G+CK G++E A + MI +G LP TY+ SK + +
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520
Query: 267 DAMNLYRKMIESGYTPDRLTYHIL---------------LKILCKEDKLDLAIQVSKEMK 311
+A L K+ PD + Y L LK C + + A +V + M
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
R +D ++LIH CR +A + + M+R G P+ + L + GM
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640
Query: 372 LA 373
A
Sbjct: 641 EA 642
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 19/384 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ +A E D A ++ L + G+ P+ V TF ++ +AG +E A F+
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLV---TFNSMVNGLCKAGRMEGARKVFD-- 247
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+MV+ + LL CK G + + F + + + P V + L++
Sbjct: 248 ---EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ--RGLVPDVVTFTSLIHA 302
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++ N++ A +MR+ + N VT+ L++G+C+ +D A+ V+EMRK GI+P+
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YN +I+G + GR + ++ P +VTY++++ GYCK G+L+ A ++ +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ +G LP TY+ R + ++ DA L+ M++ G PD TY L+ CKE
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ A+ + EM +G D+ T ++LI+ L + + EA + VP + +
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 542
Query: 359 RL-----NDEFKKRGMTALAQKLC 377
L EFK + AL + C
Sbjct: 543 ALMLCCSKAEFKS--VVALLKGFC 564
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 167/336 (49%), Gaps = 9/336 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+R G +E A+ N A + L+ + C+ G + A
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPN----AVTYNTLVAAFCRAGELDGAERV 209
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+E + + P + +N ++NG ++ ++ A + + EM +E + P+VV+Y TL+ GY
Sbjct: 210 VSLMRE-EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ + ++ + EM + G+ P+ + + ++I +AG E+ ++ + E G M
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR--ERGLRM 326
Query: 215 --VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VT+T+L+ G+CK G L+ A ++ M G PS YN + K G+++ A L
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M PD +TY ++ CK LD A Q++++M +G D T + LI LC
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ ++A FE+M++ G+ P T+ L D K G
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 125/249 (50%), Gaps = 20/249 (8%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ CK G + +A + +K L + P Y+ L+ G K + DA +
Sbjct: 401 YSTIISGYCKVGNLDSAFQL--NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFEN 458
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P+ TY TL++G+C+ V++A+ L EM ++G+ P+ + Y+ +I+GL ++ R
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 195 FEEVSGMMERFLVCEPGPTMVTY---------------TSLVKGYCKAGDLEGASKILKM 239
+E ++ + +P P + Y +L+KG+C G ++ A K+ +
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED- 298
M+ R + + Y+ + G V A++ +++M+ SG++P+ + L++ L +E
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 299 --KLDLAIQ 305
+ D AIQ
Sbjct: 639 VVEADNAIQ 647
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 94/260 (36%), Gaps = 59/260 (22%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K DSA+ L + +PD + T+ LIR + A FE N
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAI---TYSSLIRGLCEEKRLNDACELFE--N 458
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + D + L+D CK+G V+ A + + + P V Y++L+NG
Sbjct: 459 MLQLGVQPDEFT--YTTLIDGHCKEGNVEKALSLHDEM--IRKGVLPDVVTYSVLINGLS 514
Query: 121 RSKNVKDAERFWLEMRKENVTPNVV----------------------------------- 145
+S K+A R ++ E+ P+ +
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574
Query: 146 ---------------TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
Y L+ G+CR V +A+ K+M + G PN+ +++ GL
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634
Query: 191 EAGRFEEVSGMMERFLVCEP 210
E G E ++ L C P
Sbjct: 635 EEGMVVEADNAIQDLLTCCP 654
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 182/365 (49%), Gaps = 7/365 (1%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKD-TFVILIRRYARAGMVEAAIWTFEFANNLD 63
L++ EF+ +L H++ + TF LI+ G + A+ F +N+
Sbjct: 98 LSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALL---FHDNV- 153
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ F + L+ LCK G +AA + R+ P V +Y+ +++G + K
Sbjct: 154 VAMGFQLDQVGYGTLIHGLCKVGETRAALDLL--RRVDGNLVQPNVVMYSTIIDGMCKDK 211
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+V DA + EM + ++PNVVTY L+ G+ + ++ AI L +M E I+P+ +N
Sbjct: 212 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFN 271
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++DG + G+ +E + + P +VTY SL+ GYC ++ A IL M R
Sbjct: 272 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR 331
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P +YN F K KV++AMNL+++M PD +TY+ L+ LCK K+ A
Sbjct: 332 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 391
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+++ EM RG D+ T + ++ LC+ ++ D+A A + +G+ P+ T+ L D
Sbjct: 392 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Query: 364 FKKRG 368
K G
Sbjct: 452 LCKGG 456
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 153/293 (52%), Gaps = 2/293 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + L+ G++K A + F+K + ++ P V +NIL++G+ + +
Sbjct: 226 KGISPNVVTYSALISGFFTVGQLKDAIDLFNKM--ILENIKPDVYTFNILVDGFCKDGKM 283
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K+ + + M K+ + PNVVTY +L++GYC ++ V++A ++ M + G+ P+ YN +
Sbjct: 284 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNIL 343
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG + + +E + + P +VTY SL+ G CK G + A K++ M RG
Sbjct: 344 IDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TY+ K +V+ A+ L K+ + G P+ TY IL+ LCK +L+ A
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ +++ +G +I ++T T++IH C FDEA A M +P +T++
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYE 516
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 171/351 (48%), Gaps = 10/351 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K K + A+ L + + P+ V T+ LI + G ++ AI F
Sbjct: 203 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVV---TYSALISGFFTVGQLKDAIDLF---- 255
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +++N F IL+D CK G++K F + Q P V Y L++G+
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF--AMMMKQGIKPNVVTYCSLMDGYC 313
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V A+ M + V P++ +Y L++G+C++++VD A+ L KEM + I P+ +
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVV 373
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN++IDGL + G+ +++ P ++TY+S++ CK ++ A +L +
Sbjct: 374 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 433
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY K G++EDA N++ ++ GY TY +++ C +
Sbjct: 434 KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 493
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D A+ + +MK C D T ++I L + D+A + +MI RGL+
Sbjct: 494 DEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAE-KLREMITRGLL 543
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 19/357 (5%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG-----ASLFEILLDSLCKQGRVKAASE 93
LI + G AA LD+++ D ++ ++D +CK V A +
Sbjct: 168 LIHGLCKVGETRAA---------LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFD 218
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + + + +P V Y+ L++G+F +KDA + +M EN+ P+V T+ LV+G
Sbjct: 219 LY--SEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C+ ++ + M K+GI+PN + Y +++DG + ++ P
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ +Y L+ G+CK ++ A + K M + +P TYN K GK+ A+ L
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVD 396
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M + G PD +TY +L LCK ++D AI + ++K +G ++ T T+LI LC+
Sbjct: 397 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRSM 387
+ ++A FED++ +G T+ + F +G+ A L + M S +P ++
Sbjct: 457 RLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAV 513
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 145/309 (46%), Gaps = 7/309 (2%)
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+F +L + P + L+ G + A F + + V YGTL+ G
Sbjct: 113 HFQHPHQL-MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHG 171
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C++ A+ L++ + ++PN ++Y+T+IDG+ + + + + P
Sbjct: 172 LCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 231
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY++L+ G+ G L+ A + MI P T+N F K GK+++ ++
Sbjct: 232 VVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFA 291
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M++ G P+ +TY L+ C +++ A + M RG + D+ + +LI C++
Sbjct: 292 MMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIK 351
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPRSM---- 387
K DEA F++M + ++P +T+ L D K G + A KL + M VP +
Sbjct: 352 KVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYS 411
Query: 388 ELLDSRCKD 396
+LD+ CK+
Sbjct: 412 SILDALCKN 420
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 109/257 (42%), Gaps = 19/257 (7%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
Y+ + + + +V DA + + ++N TP + + ++ + + + L ++M
Sbjct: 44 YSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQME 103
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
EGI P +++ F+ +M P +T+T+L+KG C G +
Sbjct: 104 FEGINP--VLF-----------HFQHPHQLMGYH------PNTITFTTLIKGLCLKGQIH 144
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A +++ GF Y K G+ A++L R++ + P+ + Y ++
Sbjct: 145 QALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTII 204
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+CK+ ++ A + EM +G ++ T + LI + + +A F MI +
Sbjct: 205 DGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIK 264
Query: 352 PHYLTFKRLNDEFKKRG 368
P TF L D F K G
Sbjct: 265 PDVYTFNILVDGFCKDG 281
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 177/350 (50%), Gaps = 9/350 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ V+ +T LI Y + G ++ A + ++ M N S + ++++ LC++G
Sbjct: 42 LPNVVTYNT---LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS----YNVIINGLCREG 94
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+K A E + + + P YN LLNG+ + N A EM + V+P+VVT
Sbjct: 95 SMKEAWEILEEMGY--KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 152
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ C+ R ++RA+ +MR G+ PN Y T+IDG G E ++
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P++VTY + + G+C +E A +++ M+ +G P +Y+ F + G+++
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + ++M+E G +PD +TY L++ LC+ +L A +S+EM G D T T LI
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ C ++A ++MI +G +P +T+ L + K+ T A++L
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 382
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 130/263 (49%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+P V YNIL+ G+ ++ + EM + PNVVTY TL++ YC++ R+D A
Sbjct: 7 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+K M +G++PN I YN +I+GL G +E ++E P VTY +L+ GYC
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+ A I M+ G PS TY K + AM + +M G P+
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ ++ L+ A ++ EM G + T IH C + + +EA ++M
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 346 IRRGLVPHYLTFKRLNDEFKKRG 368
+ +GL P +++ + F ++G
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKG 269
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 180/382 (47%), Gaps = 16/382 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K D A+ LL P+ +S + ++I R G ++ A E
Sbjct: 51 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS---YNVIINGLCREGSMKEAWEILEEMG 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K F + LL+ CK+G A + + +P+V Y L+N
Sbjct: 108 ----YKGFTPDEVTYNTLLNGYCKEGNFHQA--LVIHAEMVRNGVSPSVVTYTALINSMC 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++N+ A F+ +MR + PN TY TL++G+ R ++ A R++ EM + G P+ +
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN I G R EE G+++ + P +V+Y++++ G+C+ G+L+ A ++ + M
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G P TY+ + + ++ +A +L ++M++ G PD TY L+ C E L
Sbjct: 282 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 341
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+ + EM +G D T ++LI+ L + + EA +I VP +T+ L
Sbjct: 342 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 401
Query: 361 -----NDEFKKRGMTALAQKLC 377
N EFK + AL + C
Sbjct: 402 IENCSNIEFKS--VVALIKGFC 421
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 170/370 (45%), Gaps = 24/370 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI +A + A+ EF + + ++ + L+D +QG + A
Sbjct: 152 TYTALINSMCKARNLNRAM---EFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 207
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++ E ++P+V YN ++G + +++A EM ++ + P+VV+Y T++ G+
Sbjct: 208 LNEMTE--SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR +DRA ++ +EM ++G+ P+A+ Y+++I GL E R E + + L P
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+L+ YC GDL A + MI +GFLP TY+ +K + +A L K
Sbjct: 326 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 385
Query: 275 MIESGYTPDRLTYHILL---------------KILCKEDKLDLAIQVSKEMKCRGCDIDL 319
+I P +TY L+ K C + + A +V + M R
Sbjct: 386 LIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 445
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
++IH CR +A +++MI G VPH +T L K GM +++ V
Sbjct: 446 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMN---EEMSEV 502
Query: 380 MSSVPRSMEL 389
+ RS L
Sbjct: 503 IGDTLRSCRL 512
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V+PNV TY L+ G+C + + + + EM + G PN + YNT+ID + GR
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G+++ P +++Y ++ G C+ G ++ A +IL+ M +GF P TYN
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K G A+ ++ +M+ +G +P +TY L+ +CK L+ A++ +M+ RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ T T LI R +EA +M G P +T+
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 224
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 6/215 (2%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M + + PN YN +I G G ++ G MER P +VTY +L+ YCK
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL---PNVVTYNTLIDAYCK 57
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G ++ A +LK M S+G P+ +YN + G +++A + +M G+TPD +T
Sbjct: 58 MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ LL CKE A+ + EM G + T T LI+ +C+ + A F+ M
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
RGL P+ T+ L D F ++G+ A ++ N M+
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 26/298 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQ 85
PD VS T +I + R G ++ A F +MV K A + L+ LC+
Sbjct: 252 APDVVSYST---IISGFCRKGELDRA-----FQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
R+ A + ++ LD P Y L+N + ++ A EM + P+ V
Sbjct: 304 RRLTEACDL--SQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID---------------GLV 190
TY L+ G + R A RL+ ++ E P+ + Y+T+I+ G
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFC 421
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G E + E + P Y ++ G+C+ G+L A + K MI GF+P
Sbjct: 422 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 481
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
T + K G E+ + + S + +L++I KE ++ + VS+
Sbjct: 482 TVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSR 539
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 34/320 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++D LCK G+ + A E ++ P+ YN L++G + +NV A+ E
Sbjct: 48 FNSIMDGLCKAGKFERAHSLLAVMAE--RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDE 105
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
P+VVTY L +G C+ R+D A LVKEM G PN + YNT+IDGL +A +
Sbjct: 106 FVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASK 165
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ ++E + P +VTYT +V G CK G L+ A K+++ M+ RG PS TY
Sbjct: 166 TEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 225
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT---------------------------- 286
+ G+V++A +++++M+ T D L
Sbjct: 226 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTP 285
Query: 287 ----YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
Y+ L+ CKE +LD V ++M CRGC ++ T +++ LC+ K DEA
Sbjct: 286 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 345
Query: 343 EDMIRRGLVPHYLTFKRLND 362
E M G VP +++ + D
Sbjct: 346 ESMHSAGCVPDVVSYNIIID 365
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 152/326 (46%), Gaps = 34/326 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D LCK + ASE H+ +D+ P +N +++G ++ + A
Sbjct: 13 YNILIDGLCKASKTDKASEMLHEM--VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N P+ TY TL+ G C+ + VDRA LV E G P+ + Y+ + DGL + GR
Sbjct: 71 MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGR 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E +++ P +VTY +L+ G CKA E A ++L+ ++S GF+P TY
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTI 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+++ A+ + M++ G TP +TY L++ LC+ ++D A + KEM +
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250
Query: 315 CDID--------------------------------LDTSTMLIHLLCRMYKFDEASAEF 342
C D +D L+ C+ + DE F
Sbjct: 251 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVF 310
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRG 368
EDM RG VP+ T+ + D K G
Sbjct: 311 EDMACRGCVPNIKTYNIVMDGLCKHG 336
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 152/298 (51%), Gaps = 3/298 (1%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
++ AP V YNIL++G ++ A EM VTP+ VT+ ++++G C+ + +
Sbjct: 3 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
RA L+ M + P+ YNT+I GL + + +++ F+ P +VTY+ L
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G CK G ++ A +++K M G P+ TYN K K E A L ++ SG+
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +TY I++ LCKE +LD A+++ + M RGC + T T L+ LCR + DEA
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR---SMELLDSRCKD 396
F++M+ + L + L + + K T AQK+ + + P L+D CK+
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 15/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA + + A+ LL + VPD V T+ I++ + G ++ A+ E
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVV---TYTIIVDGLCKEGRLDKALKMVE--- 209
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M+K + + + + L++ LC+ GRV A F ++ + + Y L+NG+
Sbjct: 210 --GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF--KEMVSKDCTADALAYVSLVNGY 265
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S K+A++ +R TP + Y L++GYC+ R+D + ++M G PN
Sbjct: 266 CKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNI 322
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN V+DGL + G+ +E +E P +V+Y ++ G KA + A ++L
Sbjct: 323 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 382
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI G P TYN F K + +DA+ + + MI++G PD +TY+ L+ L + ++
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442
Query: 300 LDLAIQVSKEMKCRGCDIDLDTS-TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A ++ EM GC + T+ +I LC+ +A + M G+ + +T+
Sbjct: 443 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 502
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
D K G A L + M ++
Sbjct: 503 IFIDRLCKEGRLDEASSLLSEMDTL 527
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 179/388 (46%), Gaps = 16/388 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A+ L VPD VS + I+I +A + A + M
Sbjct: 332 LCKHGKVDEAFPFLESMHSAGCVPDVVS---YNIIIDGLFKASKPKEARQVLD-----QM 383
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
++ A + L+ CK+ R A + + P YN L++G ++
Sbjct: 384 IQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL--KNMIKAGVDPDNVTYNTLISGLSQTN 441
Query: 124 NVKDAERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ DA EM R V TY T+++ C+ + +A+ L+ M G+E N + Y
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N ID L + GR +E S ++ + V+YT+++ G CKA L+ ASK+ + M++
Sbjct: 502 NIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 558
Query: 243 -RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+G + T+N F+K ++++A+ L M++ G +P +TY++++ LCK DK+D
Sbjct: 559 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVD 618
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ EM RG + T+LI+ LC + EA E+M L ++L
Sbjct: 619 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLY 678
Query: 362 DEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ +G A +L M++ S+ L
Sbjct: 679 LALRGQGRGEEAAELLRRMTTKMDSLSL 706
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M + + P+ YN +IDGL +A + ++ S M+ + P VT+ S++ G CKAG
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
E A +L +M R PS TYN K V+ A L + + SG+ PD +TY I
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L LCK ++D A ++ KEM GC +L T LI LC+ K ++A E ++ G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 350 LVPHYLTFKRLNDEFKKRG 368
VP +T+ + D K G
Sbjct: 181 FVPDVVTYTIIVDGLCKEG 199
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M R P TYN K K + A + +M++ G TPD +T++ ++ LCK K
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ A + M R C T LI LC+ D A ++ + G VP +T+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
L D KRG A +L MS
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSG 143
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 158/300 (52%), Gaps = 2/300 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ +C +G++K A E +++ + P V YN L+NG S N A + +
Sbjct: 166 FTTLINGVCNEGKIKVAVELYNEM--VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKK 223
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY T+++ C+ R V+ A+ + EM GI P+AI YN+++ GL G+
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + +R P +VTY ++ K + A+ L M+ +G P TY
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G++ +A+ L++KM + G PD + Y+ ++ LCK+ ++ A++ EM RG
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T + ++H C + + DEA+ F++M+ R ++P+ LTF L D + GM + A+
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ LC+ V A + K +L P V + L+NG +K A + E
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKL--GIQPDVITFTTLINGVCNEGKIKVAVELYNE 188
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+V++Y TL+ G C + A+ + K+M + G +PN + YNT+ID L +
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + P +TY S+V G C G L A+++ K M G P TYN
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K V DA + +M++ G PD +TY +L LC +L+ AI++ K+M+ +G
Sbjct: 309 IIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG 368
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ +I LC+ ++A +M+ RG+ P+ +T+ + F G A
Sbjct: 369 CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEAT 428
Query: 375 KLC------NVMSSVPRSMELLDSRCKD 396
+L NVM + L+D C++
Sbjct: 429 QLFKEMVGRNVMPNTLTFSILVDGLCQE 456
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 37/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L LC G++ A F K ++ + P V YN +++ + + V DA F E
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQ--KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VTY T++ G+C L ++D A +L KEM + PN + ++ ++DGL + G
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG---------- 244
E + E P + TY +L+ GYC + A K+ ++M+ +G
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518
Query: 245 -------------------------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
P+ TYN + G++ DA L++KM SG
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P +TY ILL LCK LD A+++ K MK + + D+ T+LI + K + A
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAK 638
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F + G+ P T+ + K G++ A +L
Sbjct: 639 GLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++DSL K V A+++ + +DQ P V Y +L+G + +A R + +
Sbjct: 306 YNIIIDSLYKDRLVNDAADFLSEM--VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKK 363
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P+VV Y T+++ C+ R V+ A+ + EM GI PNA+ Y+T++ G G+
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + + P +T++ LV G C+ G + A + + M +G P+ TYN
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K+ +A ++ M+ G PD +Y+IL+ C ++D A + +M +
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T ++ LC + + +A F+ M G++P +T+ L + K G A
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603
Query: 375 KL 376
KL
Sbjct: 604 KL 605
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 132/259 (50%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
TV NIL+N R +V A W +M K + P+V+T+ TL+ G C ++ A+ L
Sbjct: 127 TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY 186
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
EM + G EP+ I YNT+I+GL +G + ++ P +VTY +++ CK
Sbjct: 187 NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
+ A L M+ RG P TYN G++ +A L+++M ++G PD +TY
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+I++ L K+ ++ A EM +G D+ T T ++H LC + + +EA F+ M +
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Query: 348 RGLVPHYLTFKRLNDEFKK 366
+G P + + + D K
Sbjct: 367 KGCKPDVVAYNTIIDSLCK 385
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 12/280 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ ++ + G ++ A F+ +MV +N F IL+D LC++G V A
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFK-----EMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F E + P + YN L+NG+ + +A + + M + P++ +Y L+ G
Sbjct: 465 VFETMTE--KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING 522
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-- 211
YC RR+D+A L+ +M + + PN + YNT++ GL GR + + ++ +C G
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK--MCSSGML 580
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT++TY+ L+ G CK G L+ A K+ K M + P Y GK+E A L
Sbjct: 581 PTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGL 640
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K+ G P TY++++K L KE D A ++ ++ K
Sbjct: 641 FSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 14/300 (4%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ + L + K +M VT V + L+ CRL VD A+ +
Sbjct: 91 PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M K GI+P+ I + T+I+G+ G+ + + + P +++Y +L+ G C
Sbjct: 151 WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G+ A + K M G P+ TYN K V DAM+ +M+ G PD +T
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ LC +L+ A ++ K M+ GC D+ T ++I L + ++A+ +M+
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330
Query: 347 RRGLVPHYLTFK----------RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
+G+ P +T+ +LN+ R + QK C V ++DS CKD
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAI--RLFKKMEQKGCK--PDVVAYNTIIDSLCKD 386
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P P++V + + K + M G + + N + V+ A
Sbjct: 88 NPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFA 147
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
++++ KM + G PD +T+ L+ +C E K+ +A+++ EM G + D+ + LI+
Sbjct: 148 VSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLING 207
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
LC + A F+ M + G P+ +T+ + D K
Sbjct: 208 LCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCK 245
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%)
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V+DA+ + +M P + + L + K + + + +M G + + +
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LI+ LCR+ D A + + M + G+ P +TF L + G +A +L N M
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 187/384 (48%), Gaps = 32/384 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKI-----------------GGHEVPDFVSKDTFVILIRRY 43
MI +L K F +A LLDK+ G E P+ +S F L+ Y
Sbjct: 86 MILILTKHNHFKTAH-QLLDKLSQRELLSSPLVLRSLVGGVSEDPEVLSH-VFSWLMIFY 143
Query: 44 ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ 103
A++GM+ +I FE + + + + +LL+SL K+ + F K +L
Sbjct: 144 AKSGMINDSIAVFEQIMSCGLKPHLQACT----VLLNSLVKERLTDTVWKIFKKMVKLGV 199
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+ VYN+L++ +S + + AE+ EM ++ V P++ TY TL+ YC+ A
Sbjct: 200 --VANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM---VTYTSL 220
+ + M + G+ P+ + YN++I G GR E + + + G M VTYT+L
Sbjct: 258 LSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKI----KGVVMANHVTYTTL 313
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ GYC+ D++ A ++ ++M SRGF P TYN R + G++ +A L +M
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKI 373
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD +T + L+ CK + + A++V K+M G +D+ + LIH C++ + D A
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKE 433
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEF 364
E MI +GL P Y + L D F
Sbjct: 434 ELFSMIEKGLSPGYSAYSWLVDGF 457
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 1/275 (0%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP + YN L++G+ R +++A R + ++ K V N VTY TL++GYCR+ +D A+R
Sbjct: 270 APDIVTYNSLIHGFSREGRMREATRLFRKI-KGVVMANHVTYTTLIDGYCRMNDIDEALR 328
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L + M G P + YN+++ L E GR E + ++ V + P +T +L+ YC
Sbjct: 329 LREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYC 388
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K D+ A K+ K MI G +Y F K ++++A MIE G +P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYS 448
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
Y L+ ++K D ++ +E + RG D+ LI +C++ + D A FE M
Sbjct: 449 AYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFESM 508
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++GL+ + + + + + G A L +VM
Sbjct: 509 EKKGLMGDSVIYTTMAYAYWRTGKVTDASALFDVM 543
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 5/243 (2%)
Query: 142 PNVVT--YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
P V++ + L+ Y + ++ +I + +++ G++P+ +++ LV+ + V
Sbjct: 129 PEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVW 188
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ ++ + + Y LV K+GD E A K+L M +G P TYN +
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-D 318
K +A+++ +M SG PD +TY+ L+ +E ++ A ++ +++K G + +
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIK--GVVMAN 306
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
T T LI CRM DEA E M RG P +T+ + + + G A +L
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 379 VMS 381
MS
Sbjct: 367 EMS 369
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 5/192 (2%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+P ++ L+ Y K+G + + + + ++S G P K +
Sbjct: 128 DPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTV 187
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+++KM++ G + Y++L+ K + A ++ EM+ +G D+ T LI +
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN-----VMSSV 383
C+ EA + + M R G+ P +T+ L F + G A +L VM++
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGVVMANH 307
Query: 384 PRSMELLDSRCK 395
L+D C+
Sbjct: 308 VTYTTLIDGYCR 319
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 14/387 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA + D A+ LLD++ +P V+ VI + +AG A+ F+
Sbjct: 36 LIHGLCKAGKLDQAY-ELLDEMRDRGIPPGVAVHNGVI--KGLCKAGRFGDALGYFKTVA 92
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + F IL+D+L K GRV+ A + F Q P V Y ++NG
Sbjct: 93 GTKCTPDIIT----FNILVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLC 147
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + A M + PNV+TY LVEG C+ R D+ L++EM + G +P+ I
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+YNT+++GL ++ R +E +++ + PT+VTY SL++ +C++ ++ A +++++M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE--- 297
RG P YN + +++DA L ++M+ + PD +TY ++ LCK+
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 298 D---KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
D KL+ A ++ + MK GC + T ++I LCR K +A A MI +VP
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMS 381
+F + K A K+ +MS
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMS 414
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N LN R+ A + + R+E PN TYG+L+ G C+ ++D+A L+ EMR
Sbjct: 2 NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GI P V+N VI GL +AGRF + G + + P ++T+ LV K+G +E
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 233 ASKILK-MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A +I + M S LP+ TY K GK++ A+ L M E+G P+ +TY +L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ LCK + D + +EM RG D+ L++ LC+ + DEA + MIR G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
P +T+ L + F + A +L VMS
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 20/364 (5%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAAS- 92
D L++ R G I N L + D L ++++ S C V S
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 93 -EYFHKRKELDQSW-----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
E F + K++D+++ P V YN ++ G R + DA+ +M
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 141 TPNVVTYGTLVEGYCRLRRVDR------AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
P+V+TY T+++G C+ RVD A +++ M++ G PNA Y VI+GL A +
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ R + E P + +++ ++ CK+ DL+ A KI MM R P+P Y
Sbjct: 368 SQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAA 427
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
SK G+V+ A+ ++ M+ES + P TY+ +L LC +++ A+++ + M +
Sbjct: 428 LIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D + LI LCR+ +EA F+ + +G + L +E K+ + A
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Query: 375 KLCN 378
+ N
Sbjct: 547 GVAN 550
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 148/325 (45%), Gaps = 12/325 (3%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
L+ L + G+ A + F + + P Y L++G ++ + A EMR
Sbjct: 5 LNLLVRAGQHGQAVQLFREER-----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ P V + +++G C+ R A+ K + P+ I +N ++D LV++GR EE
Sbjct: 60 GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 199 SGMMERFLVCEPG-PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E P +VTYT+++ G CK G L+ A ++L +M G P+ TY+
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G+ + L ++M G+ PD + Y+ LL LCK +LD A+++ + M GC
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T L+ L CR + D A + M RG P + + + + AQ L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 378 NVMSS---VPRSM---ELLDSRCKD 396
M + VP + ++D CKD
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKD 324
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + D A LL + VPD ++ T + + + R A W E A
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD----ADWKLEAAC 337
Query: 61 N-LDMVKNFDS--GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L+M+K A + ++++ LC+ + + A R+ +D P + +++++
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL--RRMIDSEVVPDLSSFSMVIG 395
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+S ++ A + + M + PN V Y L++G + VD+A+R V E+ E P
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR-VFELMVESFRP 454
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
YN+V+DGL GR EE M+E + E P +Y +L++G C+ +E A ++
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ + ++GF YN K ++ DA + K+IE+GY
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 145/316 (45%), Gaps = 16/316 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++++ ++K+ D A+ L+ PD ++ +T + + R AR +A + A
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRV------KAASEYFHKRKELDQSWAPTVRVYNI 114
+ V + + ++D LCK RV +AA E K+ P Y +
Sbjct: 307 CVPDVITYST-------IIDGLCKDWRVDADWKLEAACEILEMMKQ--TGCPPNAGTYAV 357
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
++ G R++ + A M V P++ ++ ++ C+ +D A ++ M +
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+PN + Y +IDGL + G ++ + E +V P + TY S++ G C G +E A
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAV 476
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++++ MI + P +Y R + VE+A L++ + G+ + Y++L+ L
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 295 CKEDKLDLAIQVSKEM 310
CK+ +L A V+ ++
Sbjct: 537 CKKKRLSDAHGVANKL 552
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 179/361 (49%), Gaps = 16/361 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA + D A +L + + VPD V T+ L+ + G V+ A
Sbjct: 86 LINGFCKADKLDEAQRILQRMVSENLVPDVV---TYNSLVNGLCKNGRVDEA-------R 135
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGR-VKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L + K F + L+ LC++ R V A + F L Q + P V YNIL++G
Sbjct: 136 MLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV--LKQGYEPEVPTYNILIDGL 193
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V +A + + K + P+ +TY ++G C+ RV+ A+ ++K+M ++G P+
Sbjct: 194 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 253
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +N VI+GL + R +E ++ P +++ +L+ G C+AG + A K
Sbjct: 254 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 313
Query: 240 MISRGFLPSPTTYNYFFRYFSKF---GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M+ RG P+ TYN K G++++A+ L+ MIE G PD +TY L+ L K
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
KLD A ++ M+ +GC ++ T LI LC + K DEA F M+ +G VP +T
Sbjct: 374 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433
Query: 357 F 357
+
Sbjct: 434 Y 434
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 158/291 (54%), Gaps = 14/291 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL LC GR+ A + + + ++P V YN LL+G+ + + +A + +
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERM--IKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDG 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
K P+VVTY L+ G+C+ ++D A R+++ M E + P+ + YN++++GL + GR
Sbjct: 71 AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGR 130
Query: 195 FEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKM---MISRGFLPSP 249
+E R L+ + G P ++TY++L+ G C+ +L G S+ LK+ ++ +G+ P
Sbjct: 131 VDEA-----RMLIVDKGFSPNVITYSTLISGLCR--ELRGVSEALKLFGSVLKQGYEPEV 183
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN K +V +A L+ +++ G PD +TY + + LCK +++ A+ + K+
Sbjct: 184 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 243
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M +GC D+ + +I+ LC+ + DEA M +G P+ ++F L
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 177/358 (49%), Gaps = 16/358 (4%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K E D A + + VPD V T+ LI + +A ++ A + + ++V
Sbjct: 57 KVGELDEALKIFDGAVKRGFVPDVV---TYNALINGFCKADKLDEAQRILQRMVSENLVP 113
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS-KNV 125
+ + + L++ LCK GRV A +D+ ++P V Y+ L++G R + V
Sbjct: 114 DVVT----YNSLVNGLCKNGRVDEARMLI-----VDKGFSPNVITYSTLISGLCRELRGV 164
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + + + K+ P V TY L++G + RV+ A L + K G+EP+AI Y
Sbjct: 165 SEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 224
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDGL +AGR E+ M++ P +V++ +++ G CK ++ A +L M ++G
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK---EDKLDL 302
P+ ++N + GK + AM +++M++ G P +TY+IL+ LCK E ++
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
AI + M +G D+ T + LI L + K D+A M +G +P+ T+ L
Sbjct: 345 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 14/329 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K D A L++DK G P+ ++ T + + R R V A+ F
Sbjct: 121 LVNGLCKNGRVDEARMLIVDK--GFS-PNVITYSTLISGLCRELRG--VSEALKLFGSV- 174
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + ++ + IL+D L K+ RV A E F + P Y + ++G
Sbjct: 175 ---LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL--VKHGLEPDAITYTVFIDGLC 229
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V+DA +M ++ P+VV++ ++ G C+ +RVD A L+ M +G PNAI
Sbjct: 230 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 289
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA---GDLEGASKIL 237
+NT+I G AG++++ + L PT+VTY LV G CKA G ++ A +
Sbjct: 290 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 349
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
MI +G +P TY+ K GK++DA L M G P+ TY+ L+ LC
Sbjct: 350 DAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL 409
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+K+D A+++ M +GC D T +I
Sbjct: 410 EKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 126/239 (52%), Gaps = 12/239 (5%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MRK PN +TY L+ G C R+ A L + M K G P+ + YNT++ G + G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 195 FEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+E G ++R V P +VTY +L+ G+CKA L+ A +IL+ M+S +P
Sbjct: 61 LDEALKIFDGAVKRGFV----PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVV 116
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK-LDLAIQVSKE 309
TYN K G+V++A L +++ G++P+ +TY L+ LC+E + + A+++
Sbjct: 117 TYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGS 173
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ +G + ++ T +LI L + + +EA F +++ GL P +T+ D K G
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 232
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M GF P+ TYN G++ DA LY +MI++GY+PD +TY+ LL CK +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD A+++ RG D+ T LI+ C+ K DEA + M+ LVP +T+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 360 LNDEFKKRGMTALAQKL 376
L + K G A+ L
Sbjct: 121 LVNGLCKNGRVDEARML 137
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G+ P+R+TY+ LL LC ++ A + + M G D+ T L+H C++ +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---E 388
DEA F+ ++RG VP +T+ L + F K AQ++ M S VP +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 389 LLDSRCKD 396
L++ CK+
Sbjct: 121 LVNGLCKN 128
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L K ++F+S ++ + K G +S D F + I+ +A AG ++ A+ FE
Sbjct: 234 MLHILGKTRQFESMVAMIQEMGKAGA------LSMDAFKVAIKSFAAAGEIKNAVGVFEL 287
Query: 59 ANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
M KN FD G F LL +L K+G + A + F K + ++P +R Y L+
Sbjct: 288 -----MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDK---MHGQYSPDLRSYTALML 339
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
W ++N+ +A R W EM ++ + P+VV + T++EG R +R A+++ + M+ +G P
Sbjct: 340 AWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPP 399
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N Y +I + G+ + E + P + TYT L+ GY A ++ + +L
Sbjct: 400 NVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVL 459
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-ILCK 296
+ M +G P TYN + + +DA +Y+KMI+ G P TY++++K
Sbjct: 460 EEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVG 519
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ + V +EM RG D+++ T+ I+ R + +EA E+MI +G+ +
Sbjct: 520 DSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQID 579
Query: 357 FKRLNDEFKKRG----MTALAQKL 376
+ + +F K G + LAQK+
Sbjct: 580 YNKFAADFSKAGKPDILFELAQKV 603
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP-TMVTYTSLVKGYCKAGDLEG 232
G I Y ++ L + +FE + M++ + + G +M + +K + AG+++
Sbjct: 223 GFTHTTITYCKMLHILGKTRQFESMVAMIQE--MGKAGALSMDAFKVAIKSFAAAGEIKN 280
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A + ++M GF ++N +K G +A ++ KM Y+PD +Y L+
Sbjct: 281 AVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKM-HGQYSPDLRSYTALML 339
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C L A +V EM +G D D+ +I L R + EA FE M +G P
Sbjct: 340 AWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPP 399
Query: 353 HYLTFKRLNDEFKKRGMTALA 373
+ T+ L + K+G +A
Sbjct: 400 NVWTYTMLIRDHCKQGKMDMA 420
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 32/374 (8%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-------------FEI 77
V T ++I ++ G V A W F+ + + N + +SL FE+
Sbjct: 261 VDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEM 320
Query: 78 L------------------LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L +D LCK+G + A F K D ++ P V Y ++NG+
Sbjct: 321 LEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD-NYKPNVYTYTCMINGY 379
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + + AE + M+++ + PN TY L++G+C+ RA L+ M KEG PN
Sbjct: 380 CKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNI 439
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN +IDGL + GRF E ++ R L VTYT L+ +C+ D + A I
Sbjct: 440 FTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSR 499
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G P TYN F + KVE++ L+ + + G P + TY ++ C++
Sbjct: 500 MFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGH 559
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ AI+ +M+ GC D T LI LC K DEA +E MI GL P +T
Sbjct: 560 ISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVT 619
Query: 360 LNDEFKKRGMTALA 373
L E+ K+G +A A
Sbjct: 620 LAYEYCKQGDSATA 633
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 7/320 (2%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
F NN N D + + ++ S + G++K A + + + R+ N +++
Sbjct: 148 FLNN----DNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQ--NHGLVLKARILNFVID 201
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
V AE+ + EM V P+ +Y +V GYCR+ R+ R +K+M + G
Sbjct: 202 VALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAV 261
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ +I E G ++++ P ++ ++SL+ G CK G ++ A ++L
Sbjct: 262 DNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEML 321
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCK 296
+ M+ +G+ P+ T+ K G E A L+ K++ S Y P+ TY ++ CK
Sbjct: 322 EEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCK 381
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E+KL+ A + MK +G + +T T LI C+ F A + M + G P+ T
Sbjct: 382 EEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFT 441
Query: 357 FKRLNDEFKKRGMTALAQKL 376
+ + D K+G A KL
Sbjct: 442 YNAIIDGLCKKGRFPEAYKL 461
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 5/236 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ C+Q K A F + ++ P + YN+L+ + R K V+++E+ + E
Sbjct: 477 YTILISEFCRQTDNKQALAIFSRMFKV--GLQPDMHTYNVLIATFCRQKKVEESEKLFEE 534
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ P TY +++ GYCR + AI+ +MR G +P++I Y +I GL +
Sbjct: 535 AVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESK 594
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P VT +L YCK GD A IL+ + + ++ T N
Sbjct: 595 LDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWI---RTVNT 651
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
R KV A + K+++ DR+T + +K L +S+ +
Sbjct: 652 LIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDLSERI 707
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L K ++F+S ++ + K G +S D F + I+ +A AG ++ A+ FE
Sbjct: 234 MLHILGKTRQFESMVAMIQEMGKAGA------LSMDAFKVAIKSFAAAGEIKNAVGVFEL 287
Query: 59 ANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
M KN FD G F LL +L K+G + A + F K + ++P +R Y L+
Sbjct: 288 -----MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDK---MHGQYSPDLRSYTALML 339
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
W ++N+ +A R W EM ++ + P+VV + T++EG R +R A+++ + M+ +G P
Sbjct: 340 AWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPP 399
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N Y +I + G+ + E + P + TYT L+ GY A ++ + +L
Sbjct: 400 NVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVL 459
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-ILCK 296
+ M +G P TYN + + +DA +Y+KMI+ G P TY++++K
Sbjct: 460 EEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVG 519
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ + V +EM RG D+++ T+ I+ R + +EA E+MI +G+ +
Sbjct: 520 DSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQID 579
Query: 357 FKRLNDEFKKRG----MTALAQKL 376
+ + +F K G + LAQK+
Sbjct: 580 YNKFAADFSKAGKPDILFELAQKV 603
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V +T + + R R A+ FE L K + +L+ CKQG+
Sbjct: 364 PDVVVHNTMIEGLLRGQRR---PEAVKMFE----LMKAKGPPPNVWTYTMLIRDHCKQGK 416
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E F + +E P V Y LL G+ +K + EM ++ P+ TY
Sbjct: 417 MDMAMECFEEMQE--AKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTY 474
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG-LVEAGRFEEVSGMMERFL 206
L++ D A R+ K+M K+G+EP YN ++ V + + E
Sbjct: 475 NALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMH 534
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + +YT + G+ + G E A K ++ MI++G YN F FSK GK +
Sbjct: 535 QRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPD 594
Query: 267 DAMNLYRKMIESG 279
L +K+ +G
Sbjct: 595 ILFELAQKVKFAG 607
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP-TMVTYTSLVKGYCKAGDLEG 232
G I Y ++ L + +FE + M++ + + G +M + +K + AG+++
Sbjct: 223 GFTHTTITYCKMLHILGKTRQFESMVAMIQE--MGKAGALSMDAFKVAIKSFAAAGEIKN 280
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A + ++M GF ++N +K G +A ++ KM Y+PD +Y L+
Sbjct: 281 AVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKM-HGQYSPDLRSYTALML 339
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C L A +V EM +G D D+ +I L R + EA FE M +G P
Sbjct: 340 AWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPP 399
Query: 353 HYLTFKRLNDEFKKRGMTALA 373
+ T+ L + K+G +A
Sbjct: 400 NVWTYTMLIRDHCKQGKMDMA 420
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 34/334 (10%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K+ A F ILL LC+ +++ A + + KE+ P +YN L++G+ ++K+
Sbjct: 4 KSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEM--GCVPDDAIYNALISGYSKAKDF 61
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A +F EM K + P VVTY +V+G C+ R A++L+ EMR +G PN YN +
Sbjct: 62 GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI 121
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK----------------------- 222
++GL E + +E M+E V P +VTY S +K
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD 181
Query: 223 ---------GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
G CK+GDL+ AS++L M +RG P TY+ F K G+VE AM L
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M++ G P+ + Y+ LL L + + A + EM+ RG D+ + I LC+
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ +A A F+ M+ RG P+ ++ L +E K+
Sbjct: 302 RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKK 335
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 162/327 (49%), Gaps = 16/327 (4%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++D LCK GR K A + + + D+ +P + YN+++ G + + +A++ EM
Sbjct: 86 IVDGLCKAGRTKDAVKLLDEMR--DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV 143
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P+VVTY + ++G C+ RVD A + + M + P+ + Y TVI+GL ++G +
Sbjct: 144 RGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDS 200
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
S M+++ P +VTY+SL+ G+CK G++E A +L M+ G P+ YN
Sbjct: 201 ASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG 260
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ G + A ++ +M G+TPD ++Y+ + LCK +++ A V M RGC
Sbjct: 261 ALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 320
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG--------- 368
+ + +ML+ LC+ + D+A E + + L + L D K G
Sbjct: 321 NASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALF 380
Query: 369 MTALAQKLCNVMSSVPRSMELLDSRCK 395
L +K+C V +LDS CK
Sbjct: 381 SKVLDEKICE--PDVFFYNVMLDSHCK 405
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 182/368 (49%), Gaps = 13/368 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +KAK+F A+ L + + H +P V T+ ++ +AG + A+ +
Sbjct: 51 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVV---TYTNIVDGLCKAGRTKDAVKLLDEMR 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + ++++ LC++ ++ A + + + + P V YN + G
Sbjct: 108 D----KGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV--RGYFPDVVTYNSFIKGLC 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ V +A +F M VTP+VV+Y T++ G C+ +D A R++ +M G P+ +
Sbjct: 162 KCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVV 218
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++IDG + G E G+++ L P MV Y SL+ + G + A +L M
Sbjct: 219 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 278
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RGF P +YN K +V+ A ++ +M+E G TP+ +Y +L++ LCK+ +L
Sbjct: 279 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKEL 338
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV-PHYLTFKR 359
D AI + ++ + + +D+ T+L+ LC+ +FDEA A F ++ + P +
Sbjct: 339 DDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNV 398
Query: 360 LNDEFKKR 367
+ D KR
Sbjct: 399 MLDSHCKR 406
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
+D+S P + ILL G RS ++ A + M++ P+ Y L+ GY + +
Sbjct: 2 IDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDF 61
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+A + + EM K P + Y ++DGL +AGR ++ +++ P + TY +
Sbjct: 62 GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI 121
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
V+G C+ L+ A K+L+ M RG+ P TYN F + K +V++A +M
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PV 178
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
TPD ++Y ++ LCK LD A ++ +M RGC D+ T + LI C+ + + A
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ M++ G P+ + + L + G A+ +
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 274
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P+ T+ L+ G CR ++++A +L+ M++ G P+ +YN +I G +A
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F + + + PT+VTYT++V G CKAG + A K+L M +G P+ TYN
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K+++A + +M GY PD +TY+ +K LCK D++D A + M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ + T +I+ LC+ D AS + M RG P +T+ L D F K G
Sbjct: 181 ---DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGG------ 231
Query: 375 KLCNVMSSVPRSMELLDSRCK 395
V R+M LLDS K
Sbjct: 232 -------EVERAMGLLDSMLK 245
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 163/341 (47%), Gaps = 15/341 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+ + DSA +L PD V T+ LI + + G VE A+ +
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVV---TYSSLIDGFCKGGEVERAMGLLDSML 244
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L N + + LL +L + G + A + + + + + P V YN ++G
Sbjct: 245 KLGCRPNMVA----YNSLLGALHRLGHIGKAEDMLVEMER--RGFTPDVVSYNACIDGLC 298
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ VK A+ + M + TPN +Y LVE C+ + +D AI LV++ R++ + +
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL---VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y ++DGL + GRF+E + + L +CEP + Y ++ +CK ++ A +I
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEP--DVFFYNVMLDSHCKRRQIDKALQIH 416
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M+ R + T+N ++ DA + M++ G+ PD +TY L+ +CK
Sbjct: 417 KQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
K A+++ +E GC D+ T + LI L +EA
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 516
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 21/314 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L K KE D A L+ +++ D + + +L+ + G + A F +
Sbjct: 328 LVEELCKKKELDDAITLVEQAREKYQIVDIL---LYTVLLDGLCKGGRFDEACALF--SK 382
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
LD K + + ++LDS CK+ ++ A K++ + V +NIL++G
Sbjct: 383 VLDE-KICEPDVFFYNVMLDSHCKRRQIDKA---LQIHKQMLERNCCNVVTWNILVHGLC 438
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ DAE L M E P+ VTYGTLV+ C+ + A+ L +E K G P+ +
Sbjct: 439 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 498
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I GLV EE + + V + +++ GY + G + K+ +
Sbjct: 499 TYSALITGLVHENMAEEAYLLFTKLDV-------ALWNAMILGYAENGSGDLGLKLFVEL 551
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVED---AMNLYRKMIESGYTPDRLTYHILLKILCKE 297
I P+ T+ K K E A L+ + ++ G+ PD + L+ + K
Sbjct: 552 IESDVEPNARTFGK--EISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKC 609
Query: 298 DKLDLAIQVSKEMK 311
L+ A ++ MK
Sbjct: 610 GDLEEARRIFYSMK 623
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 163/323 (50%), Gaps = 2/323 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M + A + +++ LCK R+ A + + P +YN +L+G + +
Sbjct: 1 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMAT--RGIKPDAFIYNFVLSGLCQEE 58
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V++A + +M K+ + PNVVTY TL+ G C+ R++ A L KEM +G P + YN
Sbjct: 59 KVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYN 118
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T+IDG + + ++ + P +VTYT+L+ G K+G ++ A+++L M+ +
Sbjct: 119 TLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 178
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P+ TY+ F K +V++A L +M+ G P +TY+ILL LC+ DKL+ A
Sbjct: 179 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 238
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ + M R C + T L+ LC + D A + +MI +G P +T+ L
Sbjct: 239 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 298
Query: 364 FKKRGMTALAQKLCNVMSSVPRS 386
+ G AQ+L M R+
Sbjct: 299 LTRAGKVHEAQELMEKMKLTKRN 321
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 156/311 (50%), Gaps = 6/311 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++ R + ++ A+ T E + A ++ +L LC++ +V+ A
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEM----ATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K + Q P V YN L+NG ++ ++ A + EM + P V+Y TL++G+
Sbjct: 67 FEKM--VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + + A + +M + PN + Y T+IDGL ++G+ + + +++ + P +
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 184
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY+ L+ G+CK ++ A K+L+ M+++G P+ TYN + K+EDA L+R
Sbjct: 185 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 244
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + P +TY+ LL+ LC +LD A ++ EM +GC D T L L R K
Sbjct: 245 MAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGK 304
Query: 335 FDEASAEFEDM 345
EA E M
Sbjct: 305 VHEAQELMEKM 315
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
VP+ V T+ LI +++G V+AA + MVK + + L+D CK
Sbjct: 146 VPNVV---TYTTLIDGLSKSGKVQAAAEVLD-----GMVKKGVTPNVATYSCLIDGFCKV 197
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
RV A + + + Q APTV YNILLN R+ ++DA + + M + P VV
Sbjct: 198 RRVDEAHKLLEQM--VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 255
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL+ C +++D A RL EM +G P+AI Y+T+ GL AG+ E +ME+
Sbjct: 256 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Query: 206 LVCEPGP 212
+ + P
Sbjct: 316 KLTKRNP 322
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD LTY +++ LCK ++D A+ +EM RG D ++ LC+ K +EA
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
FE M+++ + P+ +T+ L + K A +L M+ VP + L+D CK
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 176/379 (46%), Gaps = 12/379 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ L + E + + L + + VPD + T LIR + R G A E
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTT---LIRGFCRMGKTRKAAKILEVLEG 165
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
V + + + +++ CK G + A + S +P V YN +L
Sbjct: 166 SGAVPDVIT----YNVMISGYCKAGEINNALSVLDR-----MSVSPDVVTYNTILRSLCD 216
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S +K A M + + P+V+TY L+E CR V +A++L+ EMR G P+ +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVT 276
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +++G+ + GR +E + P ++T+ +++ C G A K+L M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+GF PS T+N + + G + A+++ KM + G P+ L+Y+ LL CKE K+D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI+ + M RGC D+ T ++ LC+ K ++A + +G P +T+ +
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 362 DEFKKRGMTALAQKLCNVM 380
D K G T A KL + M
Sbjct: 457 DGLAKAGKTGKAIKLLDEM 475
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 14/347 (4%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE-FANNLDMVKNFDSGASLFEILLDS 81
G VPD + T+ ++I Y +AG + A+ + + + D+V + +L S
Sbjct: 165 GSGAVPDVI---TYNVMISGYCKAGEINNALSVLDRMSVSPDVVT--------YNTILRS 213
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC G++K A E + L + P V Y IL+ R V A + EMR T
Sbjct: 214 LCDSGKLKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCT 271
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+VVTY LV G C+ R+D AI+ + +M G +PN I +N ++ + GR+ + +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ L P++VT+ L+ C+ G L A IL+ M G P+ +YN F K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCK 391
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
K++ A+ +M+ G PD +TY+ +L LCK+ K++ A+++ ++ +GC L T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+I L + K +A ++M + L P +T+ L + G
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 165/351 (47%), Gaps = 9/351 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + T+ ILI R V A+ + + + + + +L++ +CK+GR
Sbjct: 237 PDVI---TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVT----YNVLVNGICKEGR 289
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A ++ + P V +NI+L + DAE+ +M ++ +P+VVT+
Sbjct: 290 LDEAIKFLNDMPS--SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ CR + RAI ++++M K G +PN++ YN ++ G + + + +ER +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY +++ CK G +E A +IL + S+G P TYN +K GK
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ L +M PD +TY L+ L +E K+D AI+ E + G + T ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIML 527
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
LC+ + D A MI RG P ++ L + GM A +L N
Sbjct: 528 GLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLN 578
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 155/325 (47%), Gaps = 9/325 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD V T+ +L+ + G ++ AI +F N++ I+L S+C G
Sbjct: 271 TPDVV---TYNVLVNGICKEGRLDEAI---KFLNDMP-SSGCQPNVITHNIILRSMCSTG 323
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A + L + ++P+V +NIL+N R + A +M K PN ++
Sbjct: 324 RWMDAEKLLADM--LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLS 381
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G+C+ +++DRAI ++ M G P+ + YNT++ L + G+ E+ ++ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++TY +++ G KAG A K+L M ++ P TY+ S+ GKV+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A+ + + G P+ +T++ ++ LCK + D AI M RGC + T+LI
Sbjct: 502 EAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLV 351
L EA ++ +GL+
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLM 586
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N + LV G EE +E + P ++ T+L++G+C+ G A+KIL+++
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G +P TYN + K G++ +A+++ +M +PD +TY+ +L+ LC KL
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A++V M R C D+ T T+LI CR +A ++M RG P +T+ L +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K G A K N M S
Sbjct: 283 GICKEGRLDEAIKFLNDMPS 302
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 183/363 (50%), Gaps = 18/363 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ AK +++ W D I ++ +TF I++R+YARA V+ AI+ F
Sbjct: 105 MIESTAKIRQYKLMW----DLINAMMKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME 160
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ N + F LL +LCK V+ A E F ++ + P + Y+ILL GW
Sbjct: 161 KYDLPPNLVA----FNGLLSALCKSKNVRKAQEIFENMRD---RFTPDSKTYSILLEGWG 213
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ A + EM P++VTY +V+ C+ RVD A+ +V+ M +P
Sbjct: 214 KEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 273
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R EE ++ FL E + + SL+ +CK ++ ++L
Sbjct: 274 IYSVLVHTYGTETRLEEA---VDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVL 330
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M S+G P+ + N R+ G+ ++A +++RKMI+ PD TY +++K+ C++
Sbjct: 331 KEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKVC-EPDADTYTMMIKMFCEK 389
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+++ A +V K M+ +G + T ++LI+ LC +A E+MI G+ P TF
Sbjct: 390 KEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATF 449
Query: 358 KRL 360
RL
Sbjct: 450 GRL 452
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 122/230 (53%), Gaps = 7/230 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ I++D LCK GRV E + +D S PT +Y++L++ + +++A +L
Sbjct: 240 YSIMVDILCKAGRV---DEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFL 296
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + +V + +L+ +C+ R+ R++KEM+ +G+ PN+ N ++ L++ G
Sbjct: 297 EMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRG 356
Query: 194 RFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+E + + + VCEP TYT ++K +C+ ++E A K+ K M +G PS T+
Sbjct: 357 EKDEAFDVFRKMIKVCEPDAD--TYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 414
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ + + A L +MIE G P T+ L ++L KED+ D+
Sbjct: 415 SVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDREDV 464
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 10/263 (3%)
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + E + + +VR Y++++ + + K M K+ + NV T+ ++ Y
Sbjct: 85 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKML-NVETFCIVMRKY 143
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF----EEVSGMMERFLVCEP 210
R ++VD AI M K + PN + +N ++ L ++ E M +RF
Sbjct: 144 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDRF----- 198
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TY+ L++G+ K +L A ++ + M+ G LP TY+ K G+V++A+
Sbjct: 199 TPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALG 258
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ R M S P Y +L+ E +L+ A+ EM+ G D+ LI C
Sbjct: 259 IVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 318
Query: 331 RMYKFDEASAEFEDMIRRGLVPH 353
+ + ++M +G+ P+
Sbjct: 319 KTNRMKNVYRVLKEMKSKGVTPN 341
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 51/249 (20%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTF 56
M+ +L KA D A ++ +D P TF+ +L+ Y +E A+ TF
Sbjct: 243 MVDILCKAGRVDEALGIVRSMD-------PSICKPTTFIYSVLVHTYGTETRLEEAVDTF 295
Query: 57 EFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHK------------------ 97
L+M ++ + ++F L+ + CK R+K +
Sbjct: 296 -----LEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILR 350
Query: 98 ----RKELDQSW----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
R E D+++ P Y +++ + K ++ A++ W MRK+ V P+
Sbjct: 351 HLIDRGEKDEAFDVFRKMIKVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPS 410
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+ T+ L+ G C +A L++EM + GI P+ + + L++ R + + + E
Sbjct: 411 MHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDREDVLKFLNE 470
Query: 204 RF--LVCEP 210
+ LV EP
Sbjct: 471 KMNVLVNEP 479
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 177/352 (50%), Gaps = 10/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ + GG V+ T +I+IRRY V AI TF
Sbjct: 83 MISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINTFYAHK 142
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F+ G F+ LL +LC+ VK A K++ + + +NI+LNGW
Sbjct: 143 RF----GFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV---FPFNTKSFNIILNGWC 195
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++D ER W EM + ++ + V+Y + + Y ++R + + +RL ++M++ I+P+
Sbjct: 196 VIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRK 255
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VYN VI L + +E + +++ +VTY S++K CKA + A + + +
Sbjct: 256 VYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEEL 315
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG P+ TY+ F R+ E+ L +KM G P TY +L++ C+ +L
Sbjct: 316 LQRGLCPTIQTYHAFLRFLR---TEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQL 372
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D ++ EM G D + +LIH L K ++A + +M + L+P
Sbjct: 373 DNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKDLLP 424
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRRVD 161
+A +VR Y+ +++ + + A EMR ++VT TL + YC + V
Sbjct: 73 YAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVA 132
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE----PGPTMVTY 217
+AI ++ G + +++ L R++ V E L C P T ++
Sbjct: 133 KAINTFYAHKRFGFNIGLEEFQSLLSALC---RYKNVKDA-EYLLFCNKDVFPFNTK-SF 187
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
++ G+C G L ++ K M RG +Y +SK + + L+ M
Sbjct: 188 NIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKR 247
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
PDR Y+ ++ L K L A + K M+ +G ++ T +I LC+ +FDE
Sbjct: 248 MKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDE 307
Query: 338 ASAEFEDMIRRGLVPHYLTF 357
A A FE++++RGL P T+
Sbjct: 308 ARAVFEELLQRGLCPTIQTY 327
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 10/169 (5%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLD-SLCKQGR--------VK 89
LI+ G++ + L + FD ++FE LL LC + ++
Sbjct: 276 LIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLR 335
Query: 90 AASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
E F K++ PT Y +L+ + R + + + R W EM + ++P+ +Y
Sbjct: 336 TEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYI 395
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
L+ G +++ A + EM+++ + P + + L F+E
Sbjct: 396 VLIHGLFLNGKLEDAHKYYLEMKEKDLLPEPKIDEVLQTWLAGKSVFQE 444
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 175/379 (46%), Gaps = 12/379 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ + + E + + L + + VPD + T LIR + R G A E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTT---LIRGFCRLGKTRKAAKILEILEG 165
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
V + + + +++ CK G + A + S +P V YN +L
Sbjct: 166 SGAVPDVIT----YNVMISGYCKAGEINNALSVLDR-----MSVSPDVVTYNTILRSLCD 216
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S +K A M + + P+V+TY L+E CR V A++L+ EMR G P+ +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +++G+ + GR +E + P ++T+ +++ C G A K+L M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+GF PS T+N + + G + A+++ KM + G P+ L+Y+ LL CKE K+D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI+ + M RGC D+ T ++ LC+ K ++A + +G P +T+ +
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 362 DEFKKRGMTALAQKLCNVM 380
D K G T A KL + M
Sbjct: 457 DGLAKAGKTGKAIKLLDEM 475
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 14/347 (4%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE-FANNLDMVKNFDSGASLFEILLDS 81
G VPD + T+ ++I Y +AG + A+ + + + D+V + +L S
Sbjct: 165 GSGAVPDVI---TYNVMISGYCKAGEINNALSVLDRMSVSPDVVT--------YNTILRS 213
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC G++K A E + L + P V Y IL+ R V A + EMR T
Sbjct: 214 LCDSGKLKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+VVTY LV G C+ R+D AI+ + +M G +PN I +N ++ + GR+ + +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ L P++VT+ L+ C+ G L A IL+ M G P+ +YN F K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
K++ A+ +M+ G PD +TY+ +L LCK+ K++ A+++ ++ +GC L T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+I L + K +A ++M + L P +T+ L + G
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + T+ ILI R V A+ + + + + + +L++ +CK+GR
Sbjct: 237 PDVI---TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT----YNVLVNGICKEGR 289
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A ++ + P V +NI+L + DAE+ +M ++ +P+VVT+
Sbjct: 290 LDEAIKFLNDMPS--SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ CR + RAI ++++M + G +PN++ YN ++ G + + + +ER +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY +++ CK G +E A +IL + S+G P TYN +K GK
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ L +M PD +TY L+ L +E K+D AI+ E + G + T ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
LC+ + D A MI RG P+ ++ L + GM A +L N
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 9/325 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD V T+ +L+ + G ++ AI +F N++ I+L S+C G
Sbjct: 271 TPDVV---TYNVLVNGICKEGRLDEAI---KFLNDMP-SSGCQPNVITHNIILRSMCSTG 323
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A + L + ++P+V +NIL+N R + A +M + PN ++
Sbjct: 324 RWMDAEKLLADM--LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G+C+ +++DRAI ++ M G P+ + YNT++ L + G+ E+ ++ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++TY +++ G KAG A K+L M ++ P TY+ S+ GKV+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A+ + + G P+ +T++ ++ LCK + D AI M RGC + + T+LI
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLV 351
L EA ++ +GL+
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLM 586
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N + +V G EE +E + P ++ T+L++G+C+ G A+KIL+++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G +P TYN + K G++ +A+++ +M +PD +TY+ +L+ LC KL
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A++V M R C D+ T T+LI CR A ++M RG P +T+ L +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K G A K N M S
Sbjct: 283 GICKEGRLDEAIKFLNDMPS 302
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 170/329 (51%), Gaps = 11/329 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++L S CKQG+++ + F + LD +P YNIL++G+ + V +A R + E
Sbjct: 11 FRVVLKSFCKQGKLRDGYKLFEQM--LDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P++ TY +L+ +C+ ++ A+ L K M ++G EP+ + Y+T+I GL + G+
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 195 FEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
E M+ ++ E G V Y +L+ G CK ++E A K+L+ M S+G++P TY
Sbjct: 129 VTEALEMLFHKMI-ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITY 187
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + GKV +A + M GY+PD + Y+ LL L KE K D A+++ K++
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G D T ++ L R DEA F+ M+ G P+ T+ + +
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD 307
Query: 373 AQKLCNVMS---SVPRSME---LLDSRCK 395
A K+ MS +VP + LLD CK
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCK 336
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 3/317 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASE-YFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
K F+ + ++ LCK G+V A E FHK +++ + YN L+NG + +N
Sbjct: 107 KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM--IERGCSANTVAYNALINGLCKDEN 164
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
++ A + EM + P+ +TY T++ G CR+ +V A + M G P+ + YN
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++D L + G+ +E + + + P VTY S++ G + +++ A ++ K M++ G
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ TY+ + KV+DA + +M + G PD +TY+ILL LCK + +D A
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ M GC D+ + +++++ LC+ K +A F+ MI R LVP +TF L D
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404
Query: 365 KKRGMTALAQKLCNVMS 381
K G A+ L + M+
Sbjct: 405 CKAGKLDEAKDLLDQMT 421
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 126/237 (53%), Gaps = 1/237 (0%)
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
+PN T+ +++ +C+ ++ +L ++M GI P+ I YN +IDG + GR +E +
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ E + P++ TY SL+ +CK ++ A ++ K M +GF P TY+
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 261 KFGKVEDAMN-LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K GKV +A+ L+ KMIE G + + + Y+ L+ LCK++ ++ A ++ +EM +G D
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T ++ LCRM K EA F+ M RG P + + L D K G T A KL
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 2/277 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L LC+ G+V A ++F + ++P V YN LL+ ++ +A + + +
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPS--RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + P+ VTY +++ G R +D A + K+M G PN Y+ V+ G A +
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++E P +VTY L+ G CK ++ A ++ M+ G P +Y+
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K KV DA L+ +MIE PD +T++IL+ LCK KLD A + +M C G
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
C D L++ L + + +A + M +G +
Sbjct: 425 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 133/262 (50%), Gaps = 7/262 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ +P + ++L + + ++D + + +M ++P+ + Y L++GY + RVD
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF-LVCEPG--PTMVTYTS 219
A RL +EM G+EP+ YN++++ + + +E ME F + E G P +VTY++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEA---MELFKTMAEKGFEPDVVTYST 118
Query: 220 LVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ G CK G + A ++L MI RG + YN K +E A L +M
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
GY PD +TY+ +L LC+ K+ A Q M RG D+ L+ L + K DEA
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238
Query: 339 SAEFEDMIRRGLVPHYLTFKRL 360
F+D+I +G +P +T+ +
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSI 260
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 40/316 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + + A+ LL + VPD ++ +T ++ R G V A F+
Sbjct: 155 LINGLCKDENIERAYKLLEEMASKGYVPDNITYNT---ILSGLCRMGKVSEAKQFFDSMP 211
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH----------------------KR 98
+ + + + LLD+L K+G+ A + F ++
Sbjct: 212 S----RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARK 267
Query: 99 KELDQS-----------WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+D++ AP Y+I+L+G R+K V DA + EM K P+VVTY
Sbjct: 268 SNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTY 327
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++G C+ VD+A L M G P+ + Y+ V++GL + + + + +R +
Sbjct: 328 NILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIE 387
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+ P +VT+ L+ G CKAG L+ A +L M G P YN K G+
Sbjct: 388 RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQ 447
Query: 268 AMNLYRKMIESGYTPD 283
A L + M E G+ D
Sbjct: 448 ADRLTQAMKEKGFLSD 463
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
E P T+ ++K +CK G L K+ + M+ G P YN ++K G+V++A
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
LY +M+ G P TY+ LL CKE K+ A+++ K M +G + D+ T + +I
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 329 LCRMYKFDEA-SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LC+ K EA F MI RG + + + L + K A KL M+S
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS 177
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 196/405 (48%), Gaps = 53/405 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKI--GGHEVPDFVSKDTFV--------------------- 37
+I L K+ + A LL + I GG PD V+ +T +
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197
Query: 38 -----------ILIRRYARAGMVEAAIWTFE---FANNLDMVKNFDSGASLFEILLDSLC 83
IL+ + G VE A+ + A + V ++S ++ +LC
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNS-------IIHALC 250
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
G+V A+E S +P + +N LL+G+ ++ + A EM +EN+ P+
Sbjct: 251 VAGKVVEAAEILKT-----MSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V+TY LV G CR+ +V A L++E+ ++G P+ I Y +++DGL ++G EE +++
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 365
Query: 204 RFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
V C G +V Y+SLV GYC+AG++ A +IL M+S +P TYN K
Sbjct: 366 EMSVRGCRTG--VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIK 423
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G + A++L ++ GY PD +TY+ L+ LCK +++ A ++ EM RGC + T
Sbjct: 424 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVT 483
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++ LCR+ + D+A + +M R+ P+ + + L D K
Sbjct: 484 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 528
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 7/309 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F+IL+ CK G+ A E+ E S AP V ++N+L++G F+ N A + +
Sbjct: 65 FKILIRGNCKAGQAMRALEFLRALDEF--SVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE--PNAIVYNTVIDGLVEA 192
M V P +VTY T++ G C+ +++A L++EM ++G + P+ + YNT+I+ A
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R E E+ P ++T LV G CK GD+E A +IL M G +P TY
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N GKV +A + + M +PD +T++ LL CK L A++V +EM
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
D+ T T+L++ LCR+ + A E+++R+G +P + + L D K G
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359
Query: 373 AQKLCNVMS 381
A KL MS
Sbjct: 360 AHKLVKEMS 368
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 49/408 (12%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-------------------NF 68
P+ V TF ILIR +AG A+ EF LD N
Sbjct: 60 PNLV---TFKILIRGNCKAGQ---AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNP 113
Query: 69 DSGASLFE---------------ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYN 113
D LFE ++ LCK G ++ A E + AP + YN
Sbjct: 114 DQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYN 173
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
L+N ++R+ +++A F +M+ + P+V+T LV G C+ V+ A+ ++ M+
Sbjct: 174 TLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA 233
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G P+ I YN++I L AG+ E + ++ + + C P +VT+ +L+ G+CKAG L A
Sbjct: 234 GPVPDVITYNSIIHALCVAGKVVEAAEIL-KTMSCS--PDLVTFNTLLDGFCKAGMLPRA 290
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
++L+ M LP TY + G+V+ A L +++ GY PD + Y L+
Sbjct: 291 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG 350
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LCK +++ A ++ KEM RGC + + L+ CR +A +M+ +VP
Sbjct: 351 LCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPP 410
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCK 395
T+ + K G + A L + + + VP + L+D CK
Sbjct: 411 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 458
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 162/336 (48%), Gaps = 11/336 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQG 86
PD V TF L+ + +AGM+ A+ E +M + N + IL++ LC+ G
Sbjct: 269 PDLV---TFNTLLDGFCKAGMLPRALEVLE-----EMCRENILPDVITYTILVNGLCRVG 320
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V+ A ++ + + Q + P V Y L++G +S +++A + EM VV
Sbjct: 321 QVQVA--FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +LV GYCR V +A ++ EM + P YN V+ GL++ G + ++ +
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +L+ G CKA + A + M SRG P+ T + G+V+
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD 498
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
DA +L +M + P+ + Y L+ LCK D++D A V M+ +G +D LI
Sbjct: 499 DAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLI 558
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ + EA A +++M+ RG +P T K L +
Sbjct: 559 VSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 594
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 19/315 (6%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ R A ++F E D + V YN LL+ +S + + + ++ +PN
Sbjct: 3 RSSRPDLAIQFFDWAGEQD-GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPN 61
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+VT+ L+ G C+ + RA+ ++ + + + P+ ++N +I GL + G ++ + E
Sbjct: 62 LVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFE 121
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP--TTYNYFFRYFSK 261
P +VTY +++ G CK+G+LE A ++L+ MI +G +P TYN F +
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
++ +A KM +G PD LT +IL+ +CK+ ++ A+++ MK G D+ T
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+IH LC K EA+ + M P +TF L D F K GM
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGM------------ 286
Query: 382 SVPRSMELLDSRCKD 396
+PR++E+L+ C++
Sbjct: 287 -LPRALEVLEEMCRE 300
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 17/196 (8%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K A L+ D + VPD V+ +T LI +A V A + A+ +
Sbjct: 421 LIKDGSISKAVSLISDLVARGYVPDVVTYNT---LIDGLCKANRVREAC---DLADEMAS 474
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F + +L ++ LC+ GRV A E KR AP V VY L++G
Sbjct: 475 RGCFPNDVTLGSVVF-GLCRVGRVDDAWSLVVEMSRKRH------APNVVVYTSLIDGLC 527
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S + DA MR + V + Y L+ RV A+ + EM G P+
Sbjct: 528 KSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGS 587
Query: 181 VYNTVIDGLVEAGRFE 196
T+ + + FE
Sbjct: 588 TSKTLEEAAMSNSVFE 603
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 167/341 (48%), Gaps = 9/341 (2%)
Query: 63 DMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+M+ N S + + F L+D C+QG + A E F + + + PTV VY IL+ G
Sbjct: 172 EMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV--KGIVPTVIVYTILIRGLCS 229
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+++AE MR+ V PNV TY TL++GYC+L +A+RL ++M EG+ P+ +
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVT 289
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+ +IDGL + G + + + P + Y SL+ YCK GD+ A + +
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE 349
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
P TY+ R + E+A N++ KM + G + +TY+ L+ CKE K+D
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+++ +M G + ++ T + LI C++ A + +M+ + L P +T+ +
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMI 469
Query: 362 DEFKKRGMTALAQKLCNVM---SSVPRSME---LLDSRCKD 396
D K G A KL + M P LLD CKD
Sbjct: 470 DGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKD 510
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 155/291 (53%), Gaps = 15/291 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+D LCK G +KAA F + S P + VYN L++ + + +V +A +LE
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKF--SVTPNIAVYNSLIDAYCKVGDVSEAMALFLE 347
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + V+P+V TY L+ G C + R + A + ++M KEGI N++ YN++IDG + G+
Sbjct: 348 LERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGK 407
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P ++T+++L+ GYCK +L+ A I M+ + P TY
Sbjct: 408 MDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTA 467
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV---SKEMK 311
K+G +++A+ LY M+++G TP+ T LL LCK+ K+ A+++ E +
Sbjct: 468 MIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQ 527
Query: 312 CRGCDIDLDTS----------TMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C++D S T LIH LC+ +F +A F DM R GL P
Sbjct: 528 TPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQP 578
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 172/379 (45%), Gaps = 15/379 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ VL K F+ W + + I P + TF LI R G + A F+
Sbjct: 153 LLYVLVKTGRFELLWRIYEEMISNGLSPSVI---TFGTLIDGCCRQGDLLRAQEMFDEMR 209
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
VK ++ IL+ LC +++ A +E+ P V YN L++G+
Sbjct: 210 ----VKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV--GVYPNVYTYNTLMDGYC 263
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N K A R + +M E + P+VVT+G L++G C+ + A L M K + PN
Sbjct: 264 KLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIA 323
Query: 181 VYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
VYN++ID + G E + +ERF E P + TY+ L++G C E A I
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELERF---EVSPDVFTYSILIRGLCSVSRTEEAGNIF 380
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M G L + TYN K GK++ A+ + +M E+G P+ +T+ L+ CK
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A+ + EM + D+ T T +I C+ EA + DM+ G+ P+ T
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500
Query: 358 KRLNDEFKKRGMTALAQKL 376
L D K G + A +L
Sbjct: 501 SCLLDGLCKDGKISDALEL 519
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
++ TPNV YG L+ C++ V+ A+ + K G N ++ LV+ GR
Sbjct: 108 LKSSKFTPNV--YGELIIVLCKMELVEEALSM---YHKVGAALTIQACNVLLYVLVKTGR 162
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
FE + + E + P+++T+ +L+ G C+ GDL A ++ M +G +P+ Y
Sbjct: 163 FELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTI 222
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R K+E+A +++R M E G P+ TY+ L+ CK A+++ ++M G
Sbjct: 223 LIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG 282
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T +LI LC+ + A F +MI+ + P+ + L D + K G + A
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342
Query: 375 KL 376
L
Sbjct: 343 AL 344
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 31 VSKDTFV--ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
VS D F ILIR E A FE ++ N + + L+D CK+G++
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILAN----SVTYNSLIDGCCKEGKM 408
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A E + E P V ++ L++G+ + +N++ A + EM ++++P+VVTY
Sbjct: 409 DKALEICSQMTE--NGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYT 466
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF--------EEVSG 200
+++G+C+ + A++L +M GI PN + ++DGL + G+ E++
Sbjct: 467 AMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEF 526
Query: 201 MMERFLVCEPG--PTM---VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
R V G P++ V YT+L+ G C+ G A K+ M G P Y
Sbjct: 527 QTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVM 586
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
R + + M L+ M++ G P+ + IL + + L A SK+++
Sbjct: 587 LRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLE 640
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
++ S +TP+ Y L+ +LCK + ++ A+ + ++ G + + +L+++L +
Sbjct: 107 RLKSSKFTPN--VYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTG 161
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+F+ +E+MI GL P +TF L D ++G AQ++
Sbjct: 162 RFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEM 204
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 193/417 (46%), Gaps = 50/417 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I +A A + D A +D + P+ V T+ LI +ARA +E A+ E
Sbjct: 153 IITAMANAGDLDGA----MDHLRSMGCDPNVV---TYTALIAAFARAKKLEEAMKLLEEM 205
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + + +L+D+LCK V AA + +K ++ +AP V +N L++G+
Sbjct: 206 RERGCPPNLVT----YNVLVDALCKLSMVGAAQDVV--KKMIEGGFAPNVMTFNSLVDGF 259
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ NV DA + M + + PNVVTY L++G C+ ++ A +++EM+ G+ P+A
Sbjct: 260 CKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDA 319
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y+ +I GL +A + EE M+ R P +V Y+S++ +CK+G L A K L+
Sbjct: 320 FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 379
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-YTPDRLTYHILLKILCKED 298
M + P TYN K GK+ +A + +M ESG PD +TY ++ LCK D
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439
Query: 299 -----------------------------------KLDLAIQVSKEMKCRGCDIDLDTST 323
+L+ A + + MK GC ++ T T
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LI LC+ K DEA E+M G P+ +T+ + + G AQ+L M
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 182/381 (47%), Gaps = 13/381 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++VL + K+ A L ++ PD S + I+I + AG + AA+ E
Sbjct: 83 LLQVLVRCKKHREAGDLFRSELLASCEPDVCS---YNIVISGFCNAGDLHAALELLEEMK 139
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ F A ++ ++ G + A ++ P V Y L+ +
Sbjct: 140 S----AGFAPDAFTHTPIITAMANAGDLDGAMDHLRS-----MGCDPNVVTYTALIAAFA 190
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+K +++A + EMR+ PN+VTY LV+ C+L V A +VK+M + G PN +
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N+++DG + G ++ ++ + P +VTY++L+ G CK+ A ++L+ M
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+RG P TY+ K K+E+A + R+M SG TPD + Y ++ CK KL
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKR 359
A + +EM+ + D+ T +I LC++ K EA E M G ++P +T+
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430
Query: 360 LNDEFKKRGMTALAQKLCNVM 380
+ + K M AQKL + M
Sbjct: 431 VINGLCKSDMLVEAQKLLDRM 451
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 145/274 (52%), Gaps = 5/274 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK +++ A + R+ P V VY+ +++ + +S + +A++ E
Sbjct: 322 YSALIHGLCKADKIEEAEQML--RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 379
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYNTVIDGLVEAG 193
MRK+ +P+VVTY T+++G C+L ++ A ++++M++ G + P+ + Y+TVI+GL ++
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E +++R P +VTYT+++ G CK G LE A +L+ M G P+ TY
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-C 312
K KV++A + +M +G P+ +TY+ ++ LC ++ A Q+ + MK
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 559
Query: 313 RG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
R C D T +++ L EA E M
Sbjct: 560 RAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 11/264 (4%)
Query: 105 WAP--------TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
WAP T +N LL R K ++A + + P+V +Y ++ G+C
Sbjct: 65 WAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCN 124
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
+ A+ L++EM+ G P+A + +I + AG ++ G M+ P +VT
Sbjct: 125 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVT 181
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
YT+L+ + +A LE A K+L+ M RG P+ TYN K V A ++ +KMI
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
E G+ P+ +T++ L+ CK +D A ++ M +G ++ T + LI LC+ KF
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 301
Query: 337 EASAEFEDMIRRGLVPHYLTFKRL 360
EA E+M RG+ P T+ L
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSAL 325
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 131/241 (54%), Gaps = 5/241 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++ + CK G++ A + + ++ Q +P V YN +++G + + +A+
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRK--QRKSPDVVTYNTVIDGLCKLGKIAEAQVILE 413
Query: 134 EMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M++ +V P+VVTY T++ G C+ + A +L+ M K G P+ + Y T+IDGL +
Sbjct: 414 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 473
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR EE +++ P +VTYT+L+ G CKA ++ A ++++ M + G P+ TY
Sbjct: 474 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 533
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIE--SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
N G++++A L ++M + + +PD TY ++ L D + A Q+ ++M
Sbjct: 534 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Query: 311 K 311
K
Sbjct: 594 K 594
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 9/228 (3%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G A +N+++ LV + E + L+ P + +Y ++ G+C AGDL A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
++L+ M S GF P T+ + G ++ AM+ R M G P+ +TY L+
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+ KL+ A+++ +EM+ RGC +L T +L+ LC++ A + MI G P+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRCK 395
+TF L D F KRG A+KL +M +V L+D CK
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 181/356 (50%), Gaps = 16/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ D++ P V+ T +I+IR+Y V AI TF
Sbjct: 116 MISILGKMRKFDTAWTLI-DEMRKFS-PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYK 173
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ D F+ LL +LC+ V A K+ ++ + +NI+LNGW
Sbjct: 174 RFKLEMGIDD----FQSLLSALCRYKNVSDAEHLIFCNKD---TYPFDAKSFNIVLNGWC 226
Query: 121 RS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++AER W+EM V +VV+Y +++ Y + +++ ++L M+KE IEP+
Sbjct: 227 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDR 286
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
VYN VI L +A E +M + + E G P +VTY SL+K CKA E A ++
Sbjct: 287 KVYNAVIHALAKASFVSEARNLM-KTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVF 345
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TY+ F R E+ L KM + G P TY +L++ LC+
Sbjct: 346 DEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCQPTVDTYIMLIRKLCRW 402
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
D + + EMK +G DL + ++IH L K +EA +++M +G+ P+
Sbjct: 403 RDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPN 458
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 14/263 (5%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRR 159
Q + +VR Y+ +++ + + A EMRK +P++V TL + YC +
Sbjct: 104 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHD 161
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP---TMVT 216
V +AI ++ +E + +++ L R++ VS E + C +
Sbjct: 162 VGKAINTFHAYKRFKLEMGIDDFQSLLSALC---RYKNVSDA-EHLIFCNKDTYPFDAKS 217
Query: 217 YTSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ ++ G+C G A ++ M + G +Y+ +SK G + + L+ +M
Sbjct: 218 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 277
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTMLIHLLCRMYK 334
+ PDR Y+ ++ L K + A + K M+ +G + ++ T LI LC+ K
Sbjct: 278 KKESIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARK 337
Query: 335 FDEASAEFEDMIRRGLVPHYLTF 357
+EA F++M+ +GL P T+
Sbjct: 338 TEEAKQVFDEMLEKGLFPTIRTY 360
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV Y +L+ R ++ + W EM+++ V P++ +Y ++ G +++ A
Sbjct: 387 PTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGY 446
Query: 167 VKEMRKEGIEPNAIVYNTV 185
KEM+++G+ PN V + +
Sbjct: 447 YKEMKEKGMRPNENVEDMI 465
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 174/355 (49%), Gaps = 42/355 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
TF ++I+ + G +EAA F + + M+++ F +LD LCK+ R+ A
Sbjct: 173 TFGLIIKGLCKEGEIEAA---FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 229
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F ++ L++ P V Y+ L++G + + +A + +M + N VTY T+V+G
Sbjct: 230 VF--KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 287
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
++ R++ A+ ++++MR G P+A+ YNT+IDG + R E G++ L P+
Sbjct: 288 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF-------------FRYFS 260
+VTYT+L G C++G + A +IL M +RG P+ TY+ YF
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407
Query: 261 KF-----------------------GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K GK+++A +MI +G PD +T+ IL+ LC
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
++D +++ + M RGC D+ T L+ LCR + DEA F+ M GL P
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 158/296 (53%), Gaps = 5/296 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D L KQ RVK A + F + + + PTV YN +++G + +++A + +
Sbjct: 33 YGALIDGLGKQRRVKEAYDLFEEARA--KGCHPTVVTYNTMIDGLCKCGRIENALTLYDD 90
Query: 135 MRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M P VVTY TL++G CR VD+ +L++EM G PNA+ YNT+++ L+ G
Sbjct: 91 MAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQG 150
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK--MMISRGFLPSPTT 251
R +E ++E+ P ++T+ ++KG CK G++E A +++ MI G P T
Sbjct: 151 RSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVIT 210
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N K ++ DA N++++ +E G P+ +TY L+ L K K+D A+Q+ +M
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
GC + T + ++ L ++ + ++A M G +P +T+ L D F KR
Sbjct: 271 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 326
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 143/271 (52%), Gaps = 4/271 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D L K GR++ A R+ D P YN L++G+F+ + +++A E
Sbjct: 281 YSTVVDGLLKVGRMEDAVVVL--RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVTY TL G CR R D A+ ++ M G PNAI Y++++DGL +AGR
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398
Query: 195 FEEVSGMMERFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E G E+ E P ++ Y++L+ G CKAG ++ A + L+ MI G +P T++
Sbjct: 399 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFS 458
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
G+++ + L+R M E G PD +TY L+ LC+ ++D A + ++M+
Sbjct: 459 ILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSD 518
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
G D T +IH L + + DE + +D
Sbjct: 519 GLSPDRSTRRTMIHGLLEVNR-DEDAKRIQD 548
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 152/300 (50%), Gaps = 5/300 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L+++L QGR K A + P + + +++ G + ++ A R
Sbjct: 136 AVTYNTLVNALLGQGRSKEAFSLLEQMAA--NGCPPELITFGLIIKGLCKEGEIEAAFRV 193
Query: 132 WLEM--RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + ++P+V+T+ ++++G C+ +R+ A + K + G PN + Y+T+IDGL
Sbjct: 194 VDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGL 253
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ + +E ++ + + VTY+++V G K G +E A +L+ M G LP
Sbjct: 254 SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDA 313
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN F K ++ +A+ L R+M+E+G+ P +TY L LC+ + D A+++
Sbjct: 314 VTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDY 373
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV-PHYLTFKRLNDEFKKRG 368
M RGC + T + ++ LC+ + EA FE M R +V PH + + L D K G
Sbjct: 374 MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 433
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 171/405 (42%), Gaps = 45/405 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K+++ D A L + PD V T+ LI + V+ A FE A
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVV---TYGALIDGLGKQRRVKEAYDLFEEAR 57
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K + ++D LCK GR++ A + + + PTV Y+ L++G
Sbjct: 58 ----AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMA-IHFGFRPTVVTYSTLIDGLC 112
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R V + EM PN VTY TLV R A L+++M G P I
Sbjct: 113 RDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELI 172
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
+ +I GL + G E +++ + E G P ++T+ S++ G CK + A + K
Sbjct: 173 TFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK 232
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ RG P+ TY+ SK K+++A+ L KM+E G + +TY ++ L K
Sbjct: 233 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 292
Query: 299 KLDLAIQVSKEMKCRGCDID-----------------------------------LDTST 323
+++ A+ V ++M+ GC D + T T
Sbjct: 293 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 352
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
L H LCR +FDEA + M RG P+ +T+ + D K G
Sbjct: 353 TLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 397
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 14/303 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K + D A LL + E+ + T+ ++ + G +E A+
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMV---ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + A + L+D K+ R++ A R+ L+ + P+V Y L +G
Sbjct: 306 DAGCLPD----AVTYNTLIDGFFKRQRLREAVGLL--REMLEAGFHPSVVTYTTLCHGLC 359
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNA 179
RS +A M PN +TY ++V+G C+ RV A+ ++M R E + P+
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y+ +IDGL +AG+ +E +ER + P +VT++ L+ G C AG ++ ++ +
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT----YHILLKILC 295
M RG +P TY + +V++A +L+++M G +PDR T H LL++
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539
Query: 296 KED 298
ED
Sbjct: 540 DED 542
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
F + L LC+ GR A E + AP Y+ +++G ++ V
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA--RGCAPNAITYSSIVDGLCKAGRVT 400
Query: 127 DAERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A ++ +M R E V P+V+ Y L++G C+ ++D A ++ M + G P+ + ++ +
Sbjct: 401 EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSIL 460
Query: 186 IDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
I+GL +AGR E GM ER V P MVTY +LV C+A ++ A + + M
Sbjct: 461 INGLCDAGRIDTGLELFRGMAERGCV----PDMVTYATLVDRLCRASRVDEAFDLFQQMR 516
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDA 268
S G P +T + + EDA
Sbjct: 517 SDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L R+G + A+ ++ N A + ++D LCK GRV A Y
Sbjct: 350 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN----AITYSSIVDGLCKAGRVTEALGY 405
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K D+ AP V Y+ L++G ++ + +A F M + P+VVT+ L+ G
Sbjct: 406 FEKMAR-DEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C R+D + L + M + G P+ + Y T++D L A R +E + ++ P
Sbjct: 465 CDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDR 524
Query: 215 VTYTSLVKGYCKAGDLEGASKI 236
T +++ G + E A +I
Sbjct: 525 STRRTMIHGLLEVNRDEDAKRI 546
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 156/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ LC +GR+ E + + + P YN L+NG+ + N+ E
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMR--GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++PNVVTY TL+ C+ + RA+ + +MR G+ PN Y T+IDG + G
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ +V P++VTY +LV GYC G ++ A IL+ M+ RG P +Y+
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + ++ A + +M+E G PD +TY L++ LC + KL A + +EM RG
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T LI+ C + +A ++M++RG +P +T+ L + K+ T +A+
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577
Query: 375 KL 376
+L
Sbjct: 578 RL 579
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 18/310 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D+ CK+ +VK A R A + YN ++NG + + E
Sbjct: 245 YNTLIDASCKKKKVKEAMALL--RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEE 302
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + + P+ VTY TLV G+C+ + + + L+ EM +G+ PN + Y T+I+ + +AG
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++ V P TYT+L+ G+C+ G + A K+L MI GF PS TYN
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G+V++A+ + R M+E G PD ++Y ++ C+E +L A Q+ +EM +G
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK---------------- 358
D T + LI LC K EA F +M+RRGL P +T+
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542
Query: 359 RLNDEFKKRG 368
RL+DE +RG
Sbjct: 543 RLHDEMVQRG 552
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 184/414 (44%), Gaps = 39/414 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ K LL + +G P+ V T+ LI +AG + A+ F+
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVV---TYTTLINCMCKAGNLSRAVEIFDQMR 374
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V+ + L+D C++G + A + + + ++P+V YN L++G+
Sbjct: 375 ----VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEM--IVSGFSPSVVTYNALVHGYC 428
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V++A M + + P+VV+Y T++ G+CR R + +A ++ +EM ++G+ P+ +
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488
Query: 181 VYNTVIDGL------VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
Y+++I GL VEA F+ MM R L P VTYTSL+ YC G+L A
Sbjct: 489 TYSSLIQGLCLQQKLVEA--FDLFREMMRRGL----PPDEVTYTSLINAYCVDGELSKAL 542
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL--- 291
++ M+ RGFLP TY+ +K + + A L K+ PD +TY+ L+
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602
Query: 292 ------------KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
K C + ++ A +V K M R + ++IH R +A
Sbjct: 603 SNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAY 662
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSR 393
+ ++ H + L + GM +L ++ ++ RS L D++
Sbjct: 663 NLYMELEHSSFACHTVAVIALVKALAREGMN---DELSRLLQNILRSCRLNDAK 713
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 40/271 (14%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-----FEEVSGMMER 204
+V+ RL V +A+ L+ + G P + YN V+D L+ +++ +
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P + TY +++G GDLE ++ M G P+ TYN K K
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 265 VEDAMNLYRKMIESGYT-----------------------------------PDRLTYHI 289
V++AM L R M G PD +TY+
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ CKE L + + EM +G ++ T T LI+ +C+ A F+ M RG
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
L P+ T+ L D F ++G+ A K+ + M
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEM 408
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 41/209 (19%)
Query: 201 MMERFLVCE-PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS----------- 248
+ + F +C P + + +VK + G + A +L + GF P+
Sbjct: 118 LHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDAL 177
Query: 249 ---------------------------PT--TYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
P TYN R G +E + RKM + G
Sbjct: 178 LRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEG 237
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+P+ +TY+ L+ CK+ K+ A+ + + M G +L + +I+ LC + E
Sbjct: 238 ISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVG 297
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E+M +GLVP +T+ L + F K G
Sbjct: 298 ELVEEMRGKGLVPDEVTYNTLVNGFCKEG 326
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 178/359 (49%), Gaps = 9/359 (2%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
IG +PD + + L+ + + G + AA F ++ D+ + + + ++
Sbjct: 766 IGQGILPDTI---VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT----YTAIISG 818
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
C+ G + A + FH+ L + P + + L+NG+ ++ ++KDA R M + +
Sbjct: 819 FCQIGDMVEAGKLFHEM--LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS 876
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
PNVVTY TL++G C+ +D A L+ EM K G++PN YN++++GL ++G EE +
Sbjct: 877 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 936
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ F VTYT+L+ YCK+G+++ A +IL M+ +G P+ T+N F
Sbjct: 937 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCL 996
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G +ED L M+ G P+ T++ L+K C + L A + K+M RG + D T
Sbjct: 997 HGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKT 1056
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
L+ C EA F++M +G T+ L F KR A+++ + M
Sbjct: 1057 YENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 180/366 (49%), Gaps = 14/366 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LLL ++ G+ PD +S T +I Y R G ++ E K + +
Sbjct: 692 LLLMELKGY-TPDVISYST---VINGYCRFGELDKVWKLIEKMKQ----KGLKPNSYTYG 743
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ LC+ ++ A E F + + Q P VY L++G+ + +++ A +F+ EM
Sbjct: 744 SIIGLLCRICKLAEAEEAFSEM--IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMH 801
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++TP+V+TY ++ G+C++ + A +L EM G+EP+ I + +++G +AG +
Sbjct: 802 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIK 861
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + P +VTYT+L+ G CK GDL+ A+++L M G P+ TYN
Sbjct: 862 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 921
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G +E+A+ L + +G D +TY L+ CK ++D A ++ EM +G
Sbjct: 922 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQ 981
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR----GMTAL 372
+ T +L++ C ++ M+ +G+ P+ TF L ++ R TA+
Sbjct: 982 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAI 1041
Query: 373 AQKLCN 378
+ +C+
Sbjct: 1042 YKDMCS 1047
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 10/330 (3%)
Query: 35 TFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ +I + + G MVEA E + + + F L++ CK G +K A
Sbjct: 811 TYTAIISGFCQIGDMVEAGKLFHEM-----LCRGLEPDIITFTELMNGYCKAGHIKDA-- 863
Query: 94 YFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F + Q+ +P V Y L++G + ++ A EM K + PN+ TY ++V
Sbjct: 864 -FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 922
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C+ ++ A++LV E G+ + + Y T++D ++G ++ ++ L P
Sbjct: 923 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
T+VT+ L+ G+C G LE K+L M+++G P+ TT+N + + ++ A +Y
Sbjct: 983 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIY 1042
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+ M G PD TY L+K C + A + +EMK +G + + T ++LI +
Sbjct: 1043 KDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKR 1102
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
KF EA F+ M R GL F +D
Sbjct: 1103 KKFVEAREIFDQMRRDGLAADKEIFDFFSD 1132
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 2/316 (0%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+K + + +++ C+ G + + K K+ + P Y ++ R
Sbjct: 697 LKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQ--KGLKPNSYTYGSIIGLLCRICK 754
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +AE + EM + + P+ + Y TLV+G+C+ + A + EM I P+ + Y
Sbjct: 755 LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G + G E + L P ++T+T L+ GYCKAG ++ A ++ MI G
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ TY K G ++ A L +M + G P+ TY+ ++ LCK ++ A+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ E + G + D T T L+ C+ + D+A +M+ +GL P +TF L + F
Sbjct: 935 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994
Query: 365 KKRGMTALAQKLCNVM 380
GM +KL N M
Sbjct: 995 CLHGMLEDGEKLLNWM 1010
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 3/316 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN- 124
K++ S +F++ L + G + A + F K L+ +V N+ L + N
Sbjct: 592 KDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKM--LNYGLVLSVDSCNVYLARLSKDCNK 649
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
A + E + V NV +Y ++ C+L R++ A L+ M +G P+ I Y+T
Sbjct: 650 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYST 709
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
VI+G G ++V ++E+ P TY S++ C+ L A + MI +G
Sbjct: 710 VINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG 769
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
LP Y F K G + A + +M TPD LTY ++ C+ + A
Sbjct: 770 ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 829
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ EM CRG + D+ T T L++ C+ +A MI+ G P+ +T+ L D
Sbjct: 830 KLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889
Query: 365 KKRGMTALAQKLCNVM 380
K G A +L + M
Sbjct: 890 CKEGDLDSANELLHEM 905
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 34/291 (11%)
Query: 105 WAPTVRVYN-----ILLNGWFRSKNVKDAER----FWLEMRKENVTPNVVTYGTLVEGYC 155
WA + R N I+++ SK++K A+ FW E K NVT + V + L
Sbjct: 533 WARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFW-ERPKLNVTESFVQFFDL----- 586
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL----VCEPG 211
LV + G +P V++ LVE G E + E+ L V
Sbjct: 587 ----------LVYTYKDWGSDPR--VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVD 634
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
V L K K A + + G + +YN + + G++ +A +L
Sbjct: 635 SCNVYLARLSKDCNKTAT---AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHL 691
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M GYTPD ++Y ++ C+ +LD ++ ++MK +G + T +I LLCR
Sbjct: 692 LLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCR 751
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ K EA F +MI +G++P + + L D F KRG A K M S
Sbjct: 752 ICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHS 802
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 171/309 (55%), Gaps = 5/309 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F+++++ LCK G+ + A + K ++P+V YN +++G+ ++ + A+ E
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAW--GFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PN +T+ L++G+CR V A ++ +EM+++G++PN + YN++I+GL G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G+ ++ P +VTY +L+ G+CK L+ A ++L + RG P+ T+N
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K G+++DA L M+++G P+ TY+ L+ C+E + A +++KEM+ G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI---RRGLVPHYLTFKRLNDEFKKRGMTA 371
DL T +L+ LC+ + +A ++M ++G + +T+ L F +G
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLE 529
Query: 372 LAQKLCNVM 380
A +L N M
Sbjct: 530 EANRLLNEM 538
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++L+ + K G + A E F + D + + N +L + + E +
Sbjct: 161 IVDMLVWAYVKNGEMDLALEGFDRAG--DYGFRLSALSCNPMLVSLVKEGRIGVVESVYK 218
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + NVVT+ ++ G C++ + +A +V++M+ G P+ I YNT+IDG +AG
Sbjct: 219 EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAG 278
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + +++ + P +T+ L+ G+C+ ++ A K+ + M +G P+ TYN
Sbjct: 279 KMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYN 338
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
GK+++A+ L KM G P+ +TY+ L+ CK+ L A ++ ++ R
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T LI + + D+A M+ G+ P+ T+ L F + G A
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 374 QKLCNVM 380
+KL M
Sbjct: 459 RKLAKEM 465
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 146/332 (43%), Gaps = 55/332 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L K +F A ++ D P ++ +T +I Y +AG M +A E
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNT---IIDGYCKAGKMFKADALLKEM- 290
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ K F IL+D C+ V AA + F + + Q P V YN L+NG
Sbjct: 291 ----VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR--QGLQPNVVTYNSLINGL 344
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A +M + PNVVTY L+ G+C+ + + A ++ ++ K G+ PN
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 180 IVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
I +NT+ID +AGR ++ + MM VC P + TY L+ G+C+ G+++ A K+
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC---PNVSTYNCLIVGFCREGNVKEARKL 461
Query: 237 LK--------------------------------------MMISRGFLPSPTTYNYFFRY 258
K +M +G + TYN +
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKG 521
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
F GK+E+A L +M+E G P+R TY IL
Sbjct: 522 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ CK+ +K A E + + AP V +N L++ + ++ + DA
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGK--RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V PNV TY L+ G+CR V A +L KEM G++ + + YN ++D L + G
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489
Query: 195 FEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ +++ + E +VTY L+KG+C G LE A+++L M+ +G +P+ TT
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
Y+ L +M+E G+ PD
Sbjct: 550 YDI----------------LRDEMMEKGFIPD 565
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 116/234 (49%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N + LV Y + +D A+ G +A+ N ++ LV+ GR V +
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + G +VT+ ++ G CK G + A +++ M + GF PS TYN + K
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GK+ A L ++M+ P+ +T++IL+ C+++ + A +V +EM+ +G ++ T
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LI+ LC K DEA + M GL P+ +T+ L + F K+ M A+++
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
K+L +A+E +LD IG + P+ + TF LI Y +AG ++ A +
Sbjct: 383 KMLKEARE-------MLDDIGKRGLAPNVI---TFNTLIDAYGKAGRMDDAFLLRSMMLD 432
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ N S + L+ C++G VK A + K E + A V YNIL++ +
Sbjct: 433 TGVCPN----VSTYNCLIVGFCREGNVKEARK-LAKEMEGNGLKADLV-TYNILVDALCK 486
Query: 122 SKNVKDAERFWLEM---RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ A R EM K+ N+VTY L++G+C +++ A RL+ EM ++G+ PN
Sbjct: 487 KGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 546
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMM 202
Y+ + D ++E G ++ G +
Sbjct: 547 RTTYDILRDEMMEKGFIPDIDGHL 570
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 178/355 (50%), Gaps = 11/355 (3%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
V+ DT +RR+A AG E A+ F+ + KN +S +LLD+LCK+ +V+
Sbjct: 169 LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTES----MNVLLDTLCKEKKVE 224
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + + EL AP +N+ ++GW + + +A EM+ P V++Y T
Sbjct: 225 KARQMY---LELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYST 281
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ YC ++ L+ EM +G N I Y T++ L ++ FEE + ER
Sbjct: 282 IILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAG 341
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKM-MISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + Y L+ +AG + A + ++ M S+ LP+ +TYN + + + E A
Sbjct: 342 YEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKA 401
Query: 269 MNLYRKMIESGYT-PDRLTYHILLKILCKEDKL--DLAIQVSKEMKCRGCDIDLDTSTML 325
M L +M +S + PD TY+ LLK + K DL+ + + + +D+ T ++L
Sbjct: 402 MKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLL 461
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
IH LCR K D A FE MI + + P YLT + L DEFK++ M +A ++ +M
Sbjct: 462 IHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIM 516
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 3/275 (1%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
T +Y+IL++ ++K + R LE KE + T + + + + A+R+
Sbjct: 137 TPDLYDILIDTLGKTKQLVKM-RGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIF 195
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
++ G+E N N ++D L + + E+ M L P T+ + G+CK
Sbjct: 196 DDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLE-LKSHIAPNANTFNMFIHGWCKV 254
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
++ A L+ M G P +Y+ ++ L +M G + +TY
Sbjct: 255 NKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITY 314
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE-DMI 346
++ L K ++ + A+Q+++ MK G + D LIH L R K EA FE +M
Sbjct: 315 TTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMP 374
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ ++P+ T+ + + +R A KL M
Sbjct: 375 SKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQ 409
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 10/188 (5%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF----LVCEPGPTMVTYTSLVKGYCKAGD 229
G + +Y+ +ID L + + ++ GM+E LV T+ T ++ + AG
Sbjct: 133 GFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLV-----TLDTVAKAMRRFAGAGQ 187
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
E A +I + + G + + N K KVE A +Y ++ +S P+ T+++
Sbjct: 188 WENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLEL-KSHIAPNANTFNM 246
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ CK +K+D A +EMK G + + + +I C F++ ++M +G
Sbjct: 247 FIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQG 306
Query: 350 LVPHYLTF 357
+ +T+
Sbjct: 307 CPANVITY 314
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 181/378 (47%), Gaps = 14/378 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L K K+FD W L+ +D+IGG VS T ++RR A A AI F
Sbjct: 166 MVDILGKFKQFDLMWGLISQMDEIGG-----LVSLATMTKVMRRLAGASRWTDAIDAFNK 220
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ +VK+ + +LLD+LCK+ VK A F +EL S P +N L++G
Sbjct: 221 MDQFGVVKD----TTAMNVLLDTLCKERSVKRARGAF---QELRGSVPPDESSFNTLVHG 273
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W +++ + +A EM + P+V+TY +L+E YC + ++ EMR +G PN
Sbjct: 274 WCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPN 333
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I Y V+ L +AGR +E + ++ P Y SL+ +AG LE A+ ++
Sbjct: 334 VITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVD 393
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M G P+ T+N + E+A+ + KM E PD TY LLK+ CK
Sbjct: 394 KMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQ 453
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ + + M + D T T+L+ LCR K ++ E+M+ +G P TF
Sbjct: 454 WIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFD 513
Query: 359 RLNDEFKKRGMTALAQKL 376
+ ++ K + + +K+
Sbjct: 514 LVAEKLDKANLHSAKKKI 531
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 1/202 (0%)
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+EG +A YN+++D L + +F+ + G++ + ++ T T +++ A
Sbjct: 153 QEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWT 212
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A M G + T N K V+ A ++++ PD +++ L+
Sbjct: 213 DAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQEL-RGSVPPDESSFNTLV 271
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CK ++ A + KEM+ G + T T LI C F A +M +G
Sbjct: 272 HGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCP 331
Query: 352 PHYLTFKRLNDEFKKRGMTALA 373
P+ +T+ + K G T A
Sbjct: 332 PNVITYTIVMHALGKAGRTQEA 353
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 166/330 (50%), Gaps = 7/330 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+I+ +AG V++A+ E M+K + + +L++ LCK +++ A E+
Sbjct: 55 VIQELCKAGRVDSALSLLE-----TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 109
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEGYCR 156
+ A + YN LLN ++K V A + M E +V P+VV+Y L++G+C+
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
+ + RA +L K+M PN YN ++GL+ GR + G+ E + P ++T
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y++L+ G+ A + A ++ + MISRG P+ TYN K K ++A L+RKM+
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
E G PD++TY LL C K++ A++V EM +G D D+ L+ R K
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EA F+ M+ R P ++ + D K
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSK 379
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 178/396 (44%), Gaps = 42/396 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L KA DSA LL I PD T +LI +A ++ A EF
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMA---THSMLINELCKADKIQEAQ---EFLQ 108
Query: 61 NLD-MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------------------- 97
++ + S + LL+SLCK +V A F
Sbjct: 109 GMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFC 168
Query: 98 ------------RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
++ +D + P V YN LNG R + DA+ + EM +P+V+
Sbjct: 169 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL+ G+ R+ D+A L + M G PNA+ YN ++ GL + + +E + +
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTYT+L+ G+C G +E A ++ M+S+G P YN + F + GK
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTM 324
+A L++ M+ PD ++++I++ L K +LD A++V + M+ GC DL T
Sbjct: 349 GEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 408
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LI LC + EA F+++ R L P F L
Sbjct: 409 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL 444
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 51/316 (16%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++ LCK GRV +A + + + P + +++L+N ++ +++A+ F M +
Sbjct: 55 VIQELCKAGRVDSALSLLETM--IKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112
Query: 138 ENVT--PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
T + +Y +L+ C+ ++V +A +++T++
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAF---------------AIFSTMVS-------- 149
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
ER +V P +V+Y+ L+ G+CK +L A K+ K MI +P+ TTYN F
Sbjct: 150 -------ERSVV----PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 198
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ G++ DA +Y +MI +G +PD +TY L+ K D A ++ + M RGC
Sbjct: 199 LNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC 258
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ T L+H LC+ K DEA F M+ RG P +T+ T L
Sbjct: 259 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY------------TTLLYG 306
Query: 376 LCNVMSSVPRSMELLD 391
CNV + +++E+ D
Sbjct: 307 FCNV-GKIEQAVEVFD 321
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD K T+ L+ + G +E A+ F+ +MV K D + LL + G
Sbjct: 295 PD---KVTYTTLLYGFCNVGKIEQAVEVFD-----EMVSKGHDPDVVAYNCLLKGFFRAG 346
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN-VTPNVV 145
+ A + F + + + P +NI+++G ++K + DA + M +++ +P++V
Sbjct: 347 KPGEARQLF--QVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 404
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
TY +L+ G C +R+ A+++ KE+ + + P+ +N +++ + AG
Sbjct: 405 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMM---ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
V +T+ + G CK+G +E A + + M +S PS T + + K G+V+ A++L
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS---TMLIHL 328
MI+ GY PD T+ +L+ LCK DK+ A + + M R + L++
Sbjct: 72 LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN-RTISTRASSCFSYNSLLNS 130
Query: 329 LCRMYKFDEASAEFEDMI-RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ K +A A F M+ R +VP +++ L D F K A+KL
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL 179
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 179/358 (50%), Gaps = 11/358 (3%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
V+ DT +RR+A AG E A+ F+ + KN +S +LLD+LCK+ +V+
Sbjct: 138 LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTES----MNVLLDTLCKEKKVE 193
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + + EL AP +N+ ++GW + + +A EM+ P V++Y T
Sbjct: 194 KARQMY---LELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYST 250
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ YC ++ L+ EM +G N I Y T++ L ++ FEE + ER
Sbjct: 251 IILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAG 310
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKM-MISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + Y L+ +AG + A + ++ M S+ LP+ +TYN + + + E A
Sbjct: 311 YEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKA 370
Query: 269 MNLYRKMIESGYT-PDRLTYHILLKILCKEDKL--DLAIQVSKEMKCRGCDIDLDTSTML 325
M L +M +S + PD TY+ LLK + K DL+ + + + +D+ T ++L
Sbjct: 371 MKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLL 430
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
IH LCR K D A FE MI + + P YLT + L DEFK++ M +A ++ +M +
Sbjct: 431 IHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIMKKL 488
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 3/275 (1%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
T +Y+IL++ ++K + R LE KE + T + + + + A+R+
Sbjct: 106 TPDLYDILIDTLGKTKQLVKM-RGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIF 164
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
++ G+E N N ++D L + + E+ M L P T+ + G+CK
Sbjct: 165 DDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLE-LKSHIAPNANTFNMFIHGWCKV 223
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
++ A L+ M G P +Y+ ++ L +M G + +TY
Sbjct: 224 NKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITY 283
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE-DMI 346
++ L K ++ + A+Q+++ MK G + D LIH L R K EA FE +M
Sbjct: 284 TTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMP 343
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ ++P+ T+ + + +R A KL M
Sbjct: 344 SKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQ 378
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG---YCKAGDL 230
G + +Y+ +ID L + + ++ GM+E +VT ++ K + AG
Sbjct: 102 GFKHTPDLYDILIDTLGKTKQLVKMRGMLEEM----KEARLVTLDTVAKAMRRFAGAGQW 157
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A +I + + G + + N K KVE A +Y ++ +S P+ T+++
Sbjct: 158 ENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLEL-KSHIAPNANTFNMF 216
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CK +K+D A +EMK G + + + +I C F++ ++M +G
Sbjct: 217 IHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGC 276
Query: 351 VPHYLTF 357
+ +T+
Sbjct: 277 PANVITY 283
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 177/350 (50%), Gaps = 9/350 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +L K+ + D A +L + I VPD V + LI + + G ++AA F+
Sbjct: 51 IILLLCKSGKVDDAERVLREMINQGIVPDTV---VYTTLIDGFCKLGNIQAAYKLFDEME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+V +F + + ++ LC+ G++ A + F+K + P Y L++G+
Sbjct: 108 KQRIVPDFIA----YTAVICGLCRCGKMMEADKVFNKM--FSRGVEPDEVTYTTLIDGYC 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S ++ A +M + +TPNVVTY L +G C+L +VD A L+ EM +G++ N
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNIC 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN++++GL ++G + +ME V P +T+T+L+ YCK G++ A ++L+ M
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG P+ T+N F G +ED L M+E G P+ TY+ L+K C + +
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM 341
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
++ K M RG D +T +LI C+ EA ++M +G
Sbjct: 342 RCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGF 391
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 143/271 (52%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V Y+ ++NG+ ++ + EM+ + + PN+ TY +++ C+ +VD A R
Sbjct: 7 APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+++EM +GI P+ +VY T+IDG + G + + + P + YT+++ G C
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ G + A K+ M SRG P TY + K G++E A +L+ +M++SG TP+ +
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L LCK ++D A ++ EM +G +++ T L++ LC+ +A E+M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
G+ P +TF L D + K G A +L
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ C G ++ + + + + P + YN ++ +S V DAER E
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQM--KGLKPNLYTYNSIILLLCKSGKVDDAERVLRE 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+ V Y TL++G+C+L + A +L EM K+ I P+ I Y VI GL G+
Sbjct: 71 MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P VTYT+L+ GYCK+G++E A + M+ G P+ TY
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+V+ A L +M G + TY+ L+ LCK + A+++ +EM+ G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T L+ C+ + +A +M+ RGL P +TF L + F GM +
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310
Query: 375 KL 376
+L
Sbjct: 311 RL 312
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 146/317 (46%), Gaps = 44/317 (13%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI Y ++G +E A F N + + + L D LCK G+
Sbjct: 148 PDEV---TYTTLIDGYCKSGEMEKA---FSLHNQM-VQSGLTPNVVTYTALADGLCKLGQ 200
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A+E H+ + + YN L+NG +S N++ A + EM + P+ +T+
Sbjct: 201 VDTANELLHEM--CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITF 258
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE---------- 197
TL++ YC+ + +A L++EM G++P I +N +++G +G E+
Sbjct: 259 TTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLE 318
Query: 198 ---------VSGMMERFLV--------------CEPG--PTMVTYTSLVKGYCKAGDLEG 232
+ +M+++ + C G P TY L+KG+CKA +++
Sbjct: 319 KGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKE 378
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A + K M +GF + ++YN + F K K+ +A L+ +M G D Y++ +
Sbjct: 379 AWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVD 438
Query: 293 ILCKEDKLDLAIQVSKE 309
I E ++ A+++ E
Sbjct: 439 ISYGEGNMETALELCDE 455
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D+ CK G + A E R+ LD+ PTV +N+L+NG+ S ++D ER
Sbjct: 258 FTTLMDAYCKTGEMVKAHELL--REMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ + PN TY +L++ YC + + K M G+ P++ YN +I G +A
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARN 375
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + T +Y S++KG+ K + A ++ + M G YN
Sbjct: 376 MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGY 280
F G +E A+ L + IE+ +
Sbjct: 436 FVDISYGEGNMETALELCDEAIENCF 461
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 3/288 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERFW 132
+ ILL LC + R + A E H + DQ W+ P V Y+ ++NG+F V +
Sbjct: 168 YNILLKGLCNEKRAEEALELLHMMAD-DQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLF 226
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
LEM + P+VVTY T+++G C+ + DRA + ++M G++PN YN +I G +
Sbjct: 227 LEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSI 286
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+++EV M+E P P TY SL+ CK G A MI +G PS TTY
Sbjct: 287 GKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTY 346
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
++ G + + +L M+ +G +P+ ++I K +D A+ + +M+
Sbjct: 347 GIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQ 406
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G D + LI LC++ + D+A +F MI G+ P + F L
Sbjct: 407 QGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSL 454
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I YA+ G+++ A+ F N + A + L+D+LCK GRV A F
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIF----NKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKF 436
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ P + V++ L+ G + E + EM + PN+V + T++ C
Sbjct: 437 NQM--INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLC 494
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV RLV + G+ P+ I YNT+IDG AG +E S ++E + P
Sbjct: 495 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+Y +L+ GYCKAG ++ A + M+S G P TYN + + +A LY M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG D TY+I+L LCK + +D AI++ + + +G +++ T ++I L + +
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLV + +T++ + + + G
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG 707
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 168/337 (49%), Gaps = 6/337 (1%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ I++ YA G A+ NL + +F I + K G + A
Sbjct: 342 SVTTYGIMLHGYATKG----ALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F+K ++ Q +P Y L++ + V DAE + +M E VTP++V + +LV
Sbjct: 398 MDIFNKMRQ--QGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLV 455
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G C + + ++ L EM GI PN + +NT++ L + GR E +++
Sbjct: 456 YGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVR 515
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +++Y +L+ G+C AG ++ ASK+L+ M+S G P +YN + K G+++ A +
Sbjct: 516 PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSH 575
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+RKM+ +G TP +TY+ +L L + + A ++ M G D+ T ++++ LC+
Sbjct: 576 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK 635
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F+++ +GL + +TF + K G
Sbjct: 636 SNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 43/326 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D LCK A F + +D P + YN L++G+ K+ R E
Sbjct: 241 YTTVIDGLCKAQLFDRAEAVFQQM--IDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PN TYG+L+ C+ R A M +GI+P+ Y
Sbjct: 299 MSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTY------------ 346
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
G+M + GY G L +L +M++ G P+ +N
Sbjct: 347 -----GIM------------------LHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
FF ++K G ++ AM+++ KM + G +PD ++Y L+ LCK ++D A +M G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ + L++ LC + K+++ F +M+ G+ P+ + F + K G Q
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ 503
Query: 375 KLCN------VMSSVPRSMELLDSRC 394
+L + V V L+D C
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHC 529
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 158/390 (40%), Gaps = 39/390 (10%)
Query: 8 AKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
A D A LL + PD S +T L+ Y +AG +++A F M+ N
Sbjct: 531 AGTIDEASKLLEGMVSVGLKPDSFSYNT---LLHGYCKAGRIDSAYSHFR-----KMLSN 582
Query: 68 -FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
G + +L L + R A E + W + YNI+LNG +S V
Sbjct: 583 GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW--DIYTYNIILNGLCKSNCVD 640
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A + + + + + N++T+ ++ + R + A+ L + G+ N + Y V+
Sbjct: 641 EAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVV 700
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ L+E G EE + P +LV+ GD+ A L + R F
Sbjct: 701 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 760
Query: 247 PSPTTYNYFFRYFS----------------------------KFGKVEDAMNLYRKMIES 278
+T + FS K +++DA +L+R+M+
Sbjct: 761 VEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMK 820
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G TPD +TY+ +L L + + A ++ M +++ T ++++ LC+ DEA
Sbjct: 821 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEA 880
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
F+ + +GL + +TF + K G
Sbjct: 881 FKMFQSLCSKGLQLNIITFNIMIGALLKGG 910
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 158/387 (40%), Gaps = 46/387 (11%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ D + L L+ + PD V T+ +I +A + + A F+ + + N D
Sbjct: 218 QVDKPYNLFLEMMDRGIPPDVV---TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNID 274
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDA 128
+ + L+ G+ K E +E+ P Y LLN ++ ++A
Sbjct: 275 T----YNCLIHGYLSIGKWK---EVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA 327
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEG----------------------------------- 153
F+ M + + P+V TYG ++ G
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSA 387
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y + +D+A+ + +MR++G+ P+A+ Y +ID L + GR ++ + + P
Sbjct: 388 YAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+V ++SLV G C E ++ M++ G P+ +N K G+V + L
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVD 507
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+ G PD ++Y+ L+ C +D A ++ + M G D + L+H C+
Sbjct: 508 SIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAG 567
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ D A + F M+ G+ P +T+ +
Sbjct: 568 RIDSAYSHFRKMLSNGITPGVVTYNTI 594
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF-EEV 198
V PN TY L+ +CR+ ++ + K G + IV N +++GL + R E +
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL---PSPTTYNYF 255
+++R P V+Y L+KG C E A ++L MM P+ +Y+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F G+V+ NL+ +M++ G PD +TY ++ LCK D A V ++M G
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++DT LIH + K+ E E+M G P+ T+ L + K G
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNG 322
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 130/295 (44%), Gaps = 34/295 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF I+I + G E A+ F +V+N + + +++++L ++G ++
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVT----YRLVVENLIEEGSLEEFDSL 715
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F ++ AP ++ N L+ ++ A + ++ + N + T L+ +
Sbjct: 716 FSAMEK--NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 773
Query: 155 C----------------------------RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+ RR+D A L +EM +G+ P+ + YNT++
Sbjct: 774 SSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 833
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
GL + GRF E + + + TY ++ G CK+ ++ A K+ + + S+G
Sbjct: 834 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 893
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+ T+N K G+ EDAM+L+ + +G PD +TY ++ + L +E L+
Sbjct: 894 LNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLE 948
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 30/322 (9%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L+ LCK V A + F + + +NI++ + +DA +
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQNL--CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 683
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + NVVTY +VE ++ L M K G PN+ + N ++ L+ G
Sbjct: 684 IPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 743
Query: 195 FEE----VSGMMERFLVCEPGPTMVTYT------------SLVKGY------------CK 226
+S + ER E T + + SL K Y K
Sbjct: 744 ISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKK 803
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
A ++ A + + M+ +G P TYN + G+ +A LY MI S + T
Sbjct: 804 ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 863
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+I+L LCK + +D A ++ + + +G +++ T ++I L + + ++A F +
Sbjct: 864 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 923
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
GLVP +T++ + + + G
Sbjct: 924 ANGLVPDVVTYRLVAENLIEEG 945
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 21/297 (7%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L+RR G + A + + LD +NF AS +L+ + ++ EY H
Sbjct: 734 LVRRLLHRGDISRA---GAYLSKLDE-RNFSVEASTTSMLIS-------IFSSDEYQHHA 782
Query: 99 KELDQSWAPTVRVYNILLNGWF--RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
K L + + R+ N + +++ + DA + EM + +TP+VVTY T++ G +
Sbjct: 783 KSLPKKY----RILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQ 838
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP--TM 214
R A L M + N YN +++GL ++ +E M + +C G +
Sbjct: 839 TGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQS--LCSKGLQLNI 896
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+T+ ++ K G E A + + + G +P TY + G +E+ L+
Sbjct: 897 ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLT 956
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M +SG D + L++ L + + A ++ + ++ T++ LI L R
Sbjct: 957 MEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSR 1013
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 100/261 (38%), Gaps = 50/261 (19%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
++ KA+ D A+ L + + PD V+ +T
Sbjct: 800 LIKKARRIDDAYSLFREMLMKGLTPDVVTYNT---------------------------- 831
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+L L + GR A E + ++ + YNI+LNG +S
Sbjct: 832 --------------ILHGLFQTGRFSEAKELY--LSMINSRTQMNIYTYNIILNGLCKSN 875
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V +A + + + + + N++T+ ++ + R + A+ L + G+ P+ + Y
Sbjct: 876 CVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYR 935
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT---YTSLVKGYCKAGDLEGASKILKMM 240
V + L+E G EE G+ FL E T + +LV+ + GD+ A L +
Sbjct: 936 LVAENLIEEGSLEEFDGL---FLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL 992
Query: 241 ISRGFLPSPTTYNYFFRYFSK 261
+ F +T + FS+
Sbjct: 993 DEKNFSLEASTTSELISLFSR 1013
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 197/405 (48%), Gaps = 22/405 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A LLLD P + + ++I RAG + A+ + N
Sbjct: 86 LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN---VVIGGLCRAGRLRHALGVYRQMN 142
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +F + + L+ L K GR++ A + + + P +++
Sbjct: 143 DAH-PPDFLT----YTKLVHGLSKAGRLRDAVQVLQEM--VSARHVPDNTTLTVVVQSLC 195
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNA 179
V DA EM + N +TY LV+G C+ R+D A+ L+ E+ + G P+
Sbjct: 196 LGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDI 255
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y+TVIDGL +AGR + + E + C PT +TY SL+ GYC+AGD++ A ++L
Sbjct: 256 VTYSTVIDGLCKAGRLRDAVDIFEE-MSC--APTAITYNSLIGGYCRAGDMDEAIRLLGK 312
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ P TY F K G+++DA L+++M+ + +PD +T+ L+ LC E +
Sbjct: 313 MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A+++ +E+ RGC + T ++ C+ + +A D RG VP+ +T+
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432
Query: 360 LNDEFKKRGMTALAQKLCNVMSS----VPRSMEL----LDSRCKD 396
L + G T A + + ++S P S+ + LD+ C+D
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRD 477
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 186/407 (45%), Gaps = 36/407 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVI-------------LIRRYARAG 47
++ L+KA A +L + + VPD + V L+ G
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214
Query: 48 MVEAAIWTFEFANNLDMVKNFDSGASL----------------FEILLDSLCKQGRVKAA 91
M AI + L + D +L + ++D LCK GR++ A
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F + S APT YN L+ G+ R+ ++ +A R +M +N P+V+TY TL+
Sbjct: 275 VDIFE-----EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLM 329
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+C++ R+D A L ++M + P+ + + +++DGL GR E+ ++E
Sbjct: 330 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 389
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+ TY +V GYCK+ + A +++ SRGF+P+ TYN + G+ + A+
Sbjct: 390 PTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 449
Query: 272 YRKM-IESGYTPDRLT-YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
++ E G P + Y I+L LC++ + D A+Q +EM RG T ++ L
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ ++ +A E+MI+ G P T + + + GM A +L
Sbjct: 510 CKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 12/281 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI Y RAG ++ AI MV N + L+ + CK GR+ A E
Sbjct: 289 TYNSLIGGYCRAGDMDEAIRLLG-----KMVDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + + +P V + L++G ++DA E+ + P + TY +V+G
Sbjct: 344 LFQQM--VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 401
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP- 212
YC+ +V +A LV + R G PN + YN ++ G AGR ++ +++ L E GP
Sbjct: 402 YCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ-LNSEGGPC 460
Query: 213 --TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
++ Y ++ C+ G + A + + MI RG++P+ T+ K + + A
Sbjct: 461 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHE 520
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
L +MI+ G+TP T ++ C+ + A +++ E++
Sbjct: 521 LLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 37/327 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+L LC A F K EL A Y L++ +++ + +A L+
Sbjct: 49 LNTILAELCDARDTTTAMALFDKMAEL---GAVNHTTYYNLIHPLCKARLLDEAMGLLLD 105
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + P + + ++ G CR R+ A+ + ++M + P+ + Y ++ GL +AGR
Sbjct: 106 MKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGR 164
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +++ + P T T +V+ C ++ A ++++ M+ RG + TY+
Sbjct: 165 LRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSA 224
Query: 255 FFRYFSKFGKVEDAMN-LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K ++++A+ L ++ G+TPD +TY ++ LCK +L A+ + +EM C
Sbjct: 225 LVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 284
Query: 314 --------------------------------GCDIDLDTSTMLIHLLCRMYKFDEASAE 341
C D+ T T L+ C+M + D+A
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYEL 344
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRG 368
F+ M+ L P +TF L D G
Sbjct: 345 FQQMVANKLSPDVVTFTSLVDGLCGEG 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP-TMVTYTSLVKGY 224
L+ E+R G+ P+ + NT++ L +A + ++ E G TY +L+
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKM--AELGAVNHTTYYNLIHPL 90
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CKA L+ A +L M SRG P +N + G++ A+ +YR+M ++ + PD
Sbjct: 91 CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDA-HPPDF 149
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
LTY L+ L K +L A+QV +EM D T T+++ LC + D+A E+
Sbjct: 150 LTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 209
Query: 345 MIRRGLVPHYLTFKRLNDEFKK 366
M+ RG+ + +T+ L D K
Sbjct: 210 MLHRGMAANAITYSALVDGLCK 231
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 170/369 (46%), Gaps = 17/369 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F IL++ + + A+ TF L F F LL LC + R+ A +
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKL----GFHPTVVTFNTLLHGLCVEDRISEALDL 173
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
FH Q P V + L+NG R V +A M ++ + PN +TYGT+V+G
Sbjct: 174 FH------QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227
Query: 155 CRLRRVDRAIRLVKEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C++ A+ L+++M + I PN ++YNT+IDGL + GR + + E P
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY ++ G+C +G A ++L+ M+ R P T++ F K GK +A LY
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M+ P +TY ++ CK+++LD A + +GC D+ T LI CR
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSM 387
+ D+ +M GLV + +T+ L F + G AQ L M S V
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467
Query: 388 ELLDSRCKD 396
LLD C +
Sbjct: 468 TLLDGLCDN 476
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 150/306 (49%), Gaps = 13/306 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ C GR A + + L++ P V ++ L+N + + +AE + E
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEM--LERKINPDVVTFSALINAFVKEGKFFEAEELYDE 348
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P+ VTY ++++G+C+ R+D A + +G P+ I +NT+I G A R
Sbjct: 349 MLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKR 408
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ +TYT+L+ G+C+ GDL A +L+ MIS G P+ T N
Sbjct: 409 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNT 468
Query: 255 FFRYFSKFGKVEDAMNLYRKMIES-----------GYTPDRLTYHILLKILCKEDKLDLA 303
GK++DA+ +++ M +S G PD TY+IL+ L E K A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ +EM RG D T + +I LC+ + DEA+ F+ M + P +TF L
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITG 588
Query: 364 FKKRGM 369
+ K GM
Sbjct: 589 YCKAGM 594
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 51/394 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+ R G V A+ + + + ++D +CK G +A
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRM----LEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K +E+ P V +YN +++G ++ DA ++EM+++ + P++VTY ++ G+
Sbjct: 240 LRKMEEVSH-IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C R A +L++EM + I P+ + ++ +I+ V+ G+F E + + L P+
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358
Query: 215 VTYTSLVKGYCKAGDLEGAS-----------------------------------KILKM 239
VTY+S++ G+CK L+ A K+L
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G + + TY F + G + A +L ++MI SG P+ +T + LL LC K
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478
Query: 300 LDLAIQVSKEMKCRGCDID-----------LDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L A+++ K M+ DID + T +LI L KF EA +E+M R
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G+VP +T+ + D K+ A ++ + M S
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 13/303 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+++ K+G+ A E + + L +S P+ Y+ +++G+ + + AE +
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEM--LPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ +P+++T+ TL+ GYCR +RVD I+L+ EM + G+ N I Y T+I G + G
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM--------ISR--- 243
+++ + P +VT +L+ G C G L+ A ++ K M SR
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + D+ T LI C+ D+ F +M +RG+V +T+ L
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623
Query: 364 FKK 366
F+K
Sbjct: 624 FRK 626
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 161/349 (46%), Gaps = 30/349 (8%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD--MVKNFDSGASLFEILLDSLCKQ 85
PD V TF LI + + G FE D + ++ + ++D CKQ
Sbjct: 321 PDVV---TFSALINAFVKEGKF------FEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQ 371
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
R+ AA F+ + +P + +N L+ G+ R+K V D + EM + + N +
Sbjct: 372 NRLDAAEHMFYLTPT--KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 429
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL+ G+C++ ++ A L++EM G+ PN + NT++DGL + G+ ++ +E F
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDA---LEMF 486
Query: 206 LVCEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ P + TY L+ G G A ++ + M RG +P T
Sbjct: 487 KAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y+ K ++++A ++ M ++PD +T++ L+ CK +D +++ EM
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMG 606
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
RG D T LI+ ++ D A F++MI G+ P +T + +
Sbjct: 607 QRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNM 655
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 20/295 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + TF LI Y RA V+ I +V N + L+ C+ G
Sbjct: 391 PDII---TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN----TITYTTLIHGFCQVGD 443
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE--------- 138
+ AA + + + P V N LL+G + +KDA + M+K
Sbjct: 444 LNAAQDLLQEM--ISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRP 501
Query: 139 --NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
V P+V TY L+ G + A L +EM GI P+ I Y+++IDGL + R +
Sbjct: 502 FNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + M + P +VT+ +L+ GYCKAG ++ ++ M RG + TY
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI 621
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
F K ++ A++++++MI SG PD +T +L L +++L+ A+ + ++++
Sbjct: 622 YGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 15/262 (5%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N ++ L++ +C ++ A+ ++ K G P + +NT++ GL R E +
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ +C+ P +VT+T+L+ G C+ G + A +L M+ G P+ TY K
Sbjct: 175 HQ--MCK--PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230
Query: 263 GKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G A+NL RKM E S P+ + Y+ ++ L K+ + A + EM+ + D+ T
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+I+ C ++ +A ++M+ R + P +TF L + F K G A++L + M
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM- 349
Query: 382 SVPRSM--------ELLDSRCK 395
+PRS+ ++D CK
Sbjct: 350 -LPRSIIPSTVTYSSMIDGFCK 370
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 13/232 (5%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L G+ ++ +D AI L M + P+ I + ++ +V GR + V + ++ +
Sbjct: 52 LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
++T L+K +C L A + GF P+ T+N ++ +A+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ +M + P+ +T+ L+ LC+E ++ A+ + M G + T ++ +
Sbjct: 172 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227
Query: 330 CRMYKFDEASAEFEDMIRR-----GLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+M D SA +++R+ ++P+ + + + D K G + A L
Sbjct: 228 CKMG--DTVSA--LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNL 275
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 168/334 (50%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ ILIR + AG +E + FE + N + + ++ + CK R+ A +
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVT----YNTVIGAYCKLKRIDEAFKL 260
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P + YN+++NG R +++ EM ++ P+ VTY TLV GY
Sbjct: 261 L--RSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGY 318
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ +A+ L EM + G+ P+ + Y ++I+ + +AG ++ V P
Sbjct: 319 CKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNG 378
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYTSL+ G+ + G ++ A +I MI GF P+ TYN G++E+A+ L R
Sbjct: 379 VTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRG 438
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G +PD ++Y ++ C+ +LD A Q++ EM +G D T + LI LC +
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA F++M+ + L+P T+ L + + K G
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEG 532
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 164/303 (54%), Gaps = 4/303 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++++ LC+ GR++ S E+D + +AP YN L+NG+ + N A
Sbjct: 276 YNMVINGLCRVGRIEETSGVL---AEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHS 332
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + P+VVTY +L+ C+ ++RA+ +M G+ PN + Y ++I+G + G
Sbjct: 333 EMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKG 392
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+E + + + PT+VTY +L+ G+C +G +E A +L+ M +G P +Y+
Sbjct: 393 FMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYS 452
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F ++ +++ A + +M+E G +PD +TY L++ LC++ +L+ A + +EM +
Sbjct: 453 TIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK 512
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D T T LI+ C+ +EA ++MI++G +P +T+ L + K+ T A
Sbjct: 513 SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572
Query: 374 QKL 376
++L
Sbjct: 573 KRL 575
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 27/407 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ K F A L + + PD V T+ LI +AG + A+ F+ +
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVV---TYTSLINTMCKAGNLNRAMEFFDQMH 370
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V+ + L++ ++G + A + + + + PT+ YN LLNG
Sbjct: 371 ----VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM--IRSGFPPTIVTYNALLNGHC 424
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S +++A M + ++P+VV+Y T++ G+CR + +DRA ++ EM ++G+ P+AI
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++I GL E R E + + L P TYTSL+ GYCK GDL A + M
Sbjct: 485 TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI----------- 289
I +GFLP TYN +K + +A L K+ P+ +TY
Sbjct: 545 IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFK 604
Query: 290 ----LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
L+K C + ++ A QV + M R + ++IH CR +A +++M
Sbjct: 605 SVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+ G +PH +T L GM ++L V+ + RS +L D+
Sbjct: 665 VDFGFIPHTVTIIALVKALYSEGMD---EQLNLVIRDILRSCKLSDA 708
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 1/259 (0%)
Query: 103 QSWAPTVRVYNILLNGWFRS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ P V YN +L+ R K V AE+ + EM V+ NV +Y L+ G+C ++
Sbjct: 161 NGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLE 220
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+R +EM + PN + YNTVI + R +E ++ + P ++TY ++
Sbjct: 221 MGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVI 280
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G C+ G +E S +L M +GF P TYN + K G A+ L+ +M+ +G
Sbjct: 281 NGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLP 340
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +TY L+ +CK L+ A++ +M RG + T T LI+ + DEA
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 342 FEDMIRRGLVPHYLTFKRL 360
+++MIR G P +T+ L
Sbjct: 401 WDEMIRSGFPPTIVTYNAL 419
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 7/260 (2%)
Query: 142 PNVVTYGTLVEGYCRLRR-VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P V++Y +++ R R+ V A ++ +EM G+ N YN +I G AG E
Sbjct: 165 PGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR 224
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
E P +VTY +++ YCK ++ A K+L+ M G P+ TYN
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ G++E+ + +M G+ PD +TY+ L+ CK A+ + EM G D+
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T T LI+ +C+ + A F+ M RGL P+ +T+ L + F ++G A ++ + M
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404
Query: 381 --SSVPRSM----ELLDSRC 394
S P ++ LL+ C
Sbjct: 405 IRSGFPPTIVTYNALLNGHC 424
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 123/303 (40%), Gaps = 26/303 (8%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD VS T + RY F N +MV K A + L+ LC+Q
Sbjct: 446 PDVVSYSTIIAGFCRYQELDRA--------FQMNAEMVEKGVSPDAITYSSLIQGLCEQR 497
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R+ A + F + L++S P Y L+NG+ + ++ +A EM K+ P+ VT
Sbjct: 498 RLNEACDLFQEM--LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVT 555
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID---------------GLVE 191
Y L+ G + R A RL+ ++ + PN I Y+T+I+ G
Sbjct: 556 YNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCM 615
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G E + E + P Y ++ G+C+ G++ A K+ K M+ GF+P T
Sbjct: 616 KGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVT 675
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ G E + R ++ S D L++I KE +D + EM
Sbjct: 676 IIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMA 735
Query: 312 CRG 314
G
Sbjct: 736 KDG 738
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 183/371 (49%), Gaps = 12/371 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ +L +++F W L++ H DF ++++ ++ R Y+RA + AI F+
Sbjct: 118 LVNILGTSRQFAILWDFLIEMRESH---DFEINQEIIWLVFRSYSRANLPSDAIRAFDRM 174
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ + D + LL LCK VK A ++F + K ++ A T Y+IL+ GW
Sbjct: 175 AEFGLRPSVDD----LDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKT---YSILVRGW 227
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+A + + EMR +V+ Y +L+E C+ VD A ++ +E+ G+EP+A
Sbjct: 228 GDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDA 287
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y I EA V +++R + P + TY ++K CK G +E A ++L
Sbjct: 288 CSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHE 347
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ RG P +YN Y + +V A L M++ PDR +Y++LLK+L + +
Sbjct: 348 MMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGR 407
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY-KFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ + M RG + T +++IH LC+ K +EA FE MI G+ P+ T +
Sbjct: 408 FDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIE 467
Query: 359 RLNDEFKKRGM 369
L + G+
Sbjct: 468 MLRNRLIGFGL 478
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P++ L+ CK ++ A + + F TY+ R + G+ +A +
Sbjct: 181 PSVDDLDKLLYVLCKCKHVKCAQQFFDR-VKHKFEAKAKTYSILVRGWGDIGEAVEARKV 239
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ +M G D L Y+ LL+ LCK +D A ++ +E+ G + D + + I C
Sbjct: 240 FDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCE 299
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + M R LVP+ T+ + + K G A +L + M
Sbjct: 300 ANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEM 348
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 178/354 (50%), Gaps = 10/354 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+I R+GM++ A TFE +M+ +N A LF L+ ++CK R+ F +
Sbjct: 272 MIEHLCRSGMLDEACKTFE-----EMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 98 RKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
K + + + P + YNI+++ ++K + +A+ EM ++P+VVTY LV+G C+
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
L ++DRA L++EM KEG+ P++ ++++ L +AG+ + +E P +VT
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y +L+ G CKAG ++ A L M++ P +Y + G+ A ++++M+
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+ G PD + YH LL L + DLA+++ K C+ D M++ LC+ K +
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP---DFVMHKMVLDGLCKAGKAE 563
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
+A E M G T+ + +K G A++L + S S+E L
Sbjct: 564 DACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERL 617
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 148/328 (45%), Gaps = 23/328 (7%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L LCK G + A E + +E V Y+++++G ++ V DA +
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRE--SGVKLNVITYSVVIDGCCKASRVDDALEIFKT 133
Query: 135 MRKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M P+VVT+ +L++G C R+ A L + M K G EPN I Y+T++DGL +AG
Sbjct: 134 MSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAG 193
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E + E + P +V YTS V G CKA + A + M+++G ++
Sbjct: 194 RLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFS 253
Query: 254 YFFRYFSKFGKVEDAMN-----------------LYRKMIESGYTPDRLTYHILLKILCK 296
K G E+A N + +MI + P ++ L+ +CK
Sbjct: 254 TVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 297 EDKLD---LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+L L Q K MK C +L+T +++ LC+ + DEA +M GL P
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+T+ L D K G A L MS
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMS 401
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 21/296 (7%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + + LD+L K + A E F + + + + P Y+I+L G ++ +
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQR--RGYPPDDFTYSIVLRGLCKAGEL 89
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK-EGIEPNAIVYNT 184
A+ ++R+ V NV+TY +++G C+ RVD A+ + K M G P+ + +N+
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++ GL R E + E P +++Y++L+ G CKAG L+ A ++ + M+ +
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+P Y F K +V +A + RKM+ G D + + ++ ILCK+ +
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE--- 266
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +I LCR DEA FE+MI R P F L
Sbjct: 267 ---------------EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTL 307
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 12/286 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L KAK+ D A L+ + PD V T+ L+ + G ++ A E +
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVV---TYSALVDGLCKLGKLDRACDLLEEMS 401
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + AS+ L++L K G+V A + K + P + YN LL+G
Sbjct: 402 KEGVFPDSFTDASI----LNALSKAGKVDYALSHLETMKA--RGSTPDLVTYNTLLDGLC 455
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A F +M TP+V +Y ++ CR + A + +EM K G+ P+ +
Sbjct: 456 KAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTV 515
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y++++DGL G E+++ + + +C+P V + ++ G CKAG E A ++++ M
Sbjct: 516 LYHSLLDGLARNG-LEDLALELLKTSLCKP--DFVMHKMVLDGLCKAGKAEDACEVVERM 572
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GF TY K GKV+ A L E+ + +RL+
Sbjct: 573 ADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERLS 618
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 178/354 (50%), Gaps = 10/354 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+I R+GM++ A TFE +M+ +N A LF L+ ++CK R+ F +
Sbjct: 272 MIEHLCRSGMLDEACKTFE-----EMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 98 RKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
K + + + P + YNI+++ ++K + +A+ EM ++P+VVTY LV+G C+
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
L ++DRA L++EM KEG+ P++ ++++ L +AG+ + +E P +VT
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y +L+ G CKAG ++ A L M++ P +Y + G+ A ++++M+
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+ G PD + YH LL L + DLA+++ K C+ D M++ LC+ K +
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP---DFVMHKMVVDGLCKAGKAE 563
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
+A E M G T+ + +K G A++L + S S+E L
Sbjct: 564 DACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERL 617
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 148/328 (45%), Gaps = 23/328 (7%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L LCK G + A E + +E V Y+++++G ++ V DA +
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRE--SGVKLNVITYSVVIDGCCKASRVDDALEIFKT 133
Query: 135 MRKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M P+VVT+ +L++G C R+ A L + M K G EPN I Y+T++DGL +AG
Sbjct: 134 MSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAG 193
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E + E + P +V YTS V G CKA + A + M+++G ++
Sbjct: 194 RLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFS 253
Query: 254 YFFRYFSKFGKVEDAMN-----------------LYRKMIESGYTPDRLTYHILLKILCK 296
K G E+A N + +MI + P ++ L+ +CK
Sbjct: 254 TVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 297 EDKLD---LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+L L Q K MK C +L+T +++ LC+ + DEA +M GL P
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+T+ L D K G A L MS
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMS 401
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 21/296 (7%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + + LD+L K + A E F + + + + P Y+I+L G ++ +
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQR--RGYPPDDFTYSIVLRGLCKAGEL 89
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK-EGIEPNAIVYNT 184
A+ ++R+ V NV+TY +++G C+ RVD A+ + K M G P+ + +N+
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++ GL R E + E P +++Y++L+ G CKAG L+ A ++ + M+ +
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+P Y F K +V +A + RKM+ G D + + ++ ILCK+ +
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE--- 266
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +I LCR DEA FE+MI R P F L
Sbjct: 267 ---------------EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTL 307
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 12/286 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L KAK+ D A L+ + PD V T+ L+ + G ++ A E +
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVV---TYSALVDGLCKLGKLDRACDLLEEMS 401
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + AS+ L++L K G+V A + K + P + YN LL+G
Sbjct: 402 KEGVFPDSFTDASI----LNALSKAGKVDYALSHLETMKA--RGSTPDLVTYNTLLDGLC 455
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A F +M TP+V +Y ++ CR + A + +EM K G+ P+ +
Sbjct: 456 KAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTV 515
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y++++DGL G E+++ + + +C+P V + +V G CKAG E A ++++ M
Sbjct: 516 LYHSLLDGLARNG-LEDLALELLKTSLCKP--DFVMHKMVVDGLCKAGKAEDACEVVERM 572
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GF TY R K GKV+ A L E+ + +RL+
Sbjct: 573 ADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERLS 618
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 181/368 (49%), Gaps = 10/368 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L ++ D A L+ G + P S T +I+ +AG V++A+ E
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAGRNIQP---SSGTCHSVIQELCKAGRVDSALSLLE--- 398
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M+K + + +L++ LCK +++ A E+ S + + YN LLN
Sbjct: 399 --TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSL 456
Query: 120 FRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++K V A + M E + P+VV+Y L++G+C++ + RA +L K+M PN
Sbjct: 457 CKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 516
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN ++GL+ GR + G+ E + P ++TY++L+ G+ A + A ++ +
Sbjct: 517 VTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFE 576
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MISRG P+ TYN K K ++A L+RKM+E G PDR+TY LL C
Sbjct: 577 TMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVG 636
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K++ A++V EM +G D D+ L+ R K EA F+ M+ R P ++
Sbjct: 637 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHN 696
Query: 359 RLNDEFKK 366
+ D K
Sbjct: 697 IMIDGLSK 704
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 181/401 (45%), Gaps = 42/401 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L KA DSA LL I PD T +LI +A ++ A EF
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMA---THSMLINELCKADKIQEAQ---EFLQ 433
Query: 61 NLD-MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------------------- 97
+D + + S + LL+SLCK +V A F
Sbjct: 434 GMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFC 493
Query: 98 ------------RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
++ +D + P V YN LNG R + DA+ + EM +P+V+
Sbjct: 494 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL+ G+ R+ D+A L + M G PNA+ YN ++ GL + + +E + +
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 613
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTYT+L+ G+C G +E A ++ M+S+G P YN + F + GK
Sbjct: 614 VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 673
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTM 324
+A L++ M+ PD ++++I++ L K +LD A++V + M+ GC DL T
Sbjct: 674 GEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 733
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
LI LC + EA F+++ R L P F L + K
Sbjct: 734 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK 774
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 54/352 (15%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L LCK G+++ A F + + +S + + VY++L+ S + AE LE+
Sbjct: 311 FLSGLCKSGKIEQA---FEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
N+ P+ T ++++ C+ RVD A+ L++ M K G P+ ++ +I+ L +A + +E
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQE 427
Query: 198 ----VSGMMERF--------------------------------LVCEPG--PTMVTYTS 219
+ GM + +V E P +V+Y+
Sbjct: 428 AQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G+CK +L A K+ K MI +P+ TTYN F + G++ DA +Y +M+ +G
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+PD +TY L+ K D A ++ + M RGC + T L+H LC+ K DEA
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
F M+ RG P +T+ T L CNV + +++E+ D
Sbjct: 608 ELFRKMVERGCDPDRVTY------------TTLLYGFCNV-GKIEQAVEVFD 646
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 125/308 (40%), Gaps = 37/308 (12%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V YN LL+ R +++K A + + +M + V PN TY LV+ C R D A+R
Sbjct: 129 VFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFG 188
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
EM +G +P++ +Y V + L G+ E S + R L M+ +L+ +
Sbjct: 189 EMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQD 248
Query: 229 DLEGASKILKMMISRGFLPSPTTYNY---------------------------------- 254
ASK+ + M+ G P T Y+Y
Sbjct: 249 KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAW 308
Query: 255 --FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
F K GK+E A R M ES + + Y +L+++L + ++D A + E+
Sbjct: 309 TAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
R T +I LC+ + D A + E MI+RG P T L +E K
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQE 427
Query: 373 AQKLCNVM 380
AQ+ M
Sbjct: 428 AQEFLQGM 435
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 150/385 (38%), Gaps = 75/385 (19%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+NF + LLD L + +K A + F K + Q P Y +L+ +N
Sbjct: 122 ARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM--VAQGVVPNGFTYAVLVQSSCYERN 179
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVE---------GYCRL------RRV--------- 160
+A RF+ EM + P+ Y + E + R+ +RV
Sbjct: 180 SDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKA 239
Query: 161 --------DRAI---RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
D+AI +L + M K G +P+A +Y+ ++ + +E + V
Sbjct: 240 LLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299
Query: 210 PGP-TMVTYTSLVKGYCKAGDLEGASKILKMM---------------------------- 240
P V +T+ + G CK+G +E A + + M
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAE 359
Query: 241 ------ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
R PS T + + K G+V+ A++L MI+ GY PD T+ +L+ L
Sbjct: 360 EACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINEL 419
Query: 295 CKEDKLDLAIQVSKEM--KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLV 351
CK DK+ A + + M K + L++ LC+ K +A A F M+ R V
Sbjct: 420 CKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV 479
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKL 376
P +++ L D F K A+KL
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKL 504
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 3/207 (1%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T G +++ LR A+ + ++ + + YN ++D L+ ++ + E+
Sbjct: 99 TVGAVIK---HLRDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P TY LV+ C + + A + M+ +GF PS T Y GK
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ ++ + +E + + LL +DK A ++ + M GC D + +
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYM 275
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ C++ DEA F +M P
Sbjct: 276 VLAHCKLENLDEAFKLFLEMAVESKAP 302
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 197/390 (50%), Gaps = 24/390 (6%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L K K+FD W L+ +D++GG +VS T ++RR ARA + AI F
Sbjct: 159 MVDILGKLKKFDLMWELVEEMDRLGG-----YVSLATMTKVMRRLARASRWKDAIEAFRG 213
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ K+ L+D+L K+ V+ A++ F E S +N+L++G
Sbjct: 214 MERFGVKKD----TLAMNTLMDALVKENSVEHANDVF---VEFKDSILLNPHTFNVLIHG 266
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W +++ + +A + EM++ P+V++Y ++VE YCR + + ++ EM ++G PN
Sbjct: 267 WCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPN 326
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERF-----LVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
+ Y V+ L G+ +E+S +E + C P + Y+SL+ KAG L+ A
Sbjct: 327 VVTYTIVMHAL---GKGKEISKALEVYEKMKGSSCVPDTSF--YSSLIYILSKAGRLKDA 381
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ + M +G +P TYN + EDA+ L KM ES PD TY LLK+
Sbjct: 382 RDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKM 441
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
C+ +++ + + M +++ T ++L+H LC+ K + A FE+M+ +GLVP
Sbjct: 442 CCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPK 501
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
T K L E +K+ M +++ +MS
Sbjct: 502 DCTHKLLLKELEKKSMVEAKERVEKLMSQA 531
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+M +Y S+V K + ++++ M G S T R ++ + +DA+ +
Sbjct: 152 SMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAF 211
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R M G D L + L+ L KE+ ++ A V E K ++ T +LIH C+
Sbjct: 212 RGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFK-DSILLNPHTFNVLIHGWCKA 270
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
K D A +M G P +++ + + +
Sbjct: 271 RKMDNALKSMAEMKEHGFCPDVISYTSIVEAY 302
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 185/376 (49%), Gaps = 13/376 (3%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K A L D + + +PD VS +T LI Y R G + A F+ ++ +
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNT---LIYGYCRLGNLMKAFLLFDELRSIYL 405
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ + LLD LC+QG ++ A + K + +++ AP + Y IL+NG + +
Sbjct: 406 FPTIVT----YNTLLDGLCRQGELEVAQQL--KVEMINEGIAPDIVTYTILVNGSCKMGS 459
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ A+ F+ EM E + + Y T + G +L RA L +EM +G P+ I+YN
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V+DGL + G EE S ++++ + P VTYTS++ + + G L +I M+S+G
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS TY + G++E A + +M E G P+ +TY+ L+ LCK ++D A
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAY 639
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP----HYLTFKRL 360
EM +G + + T+LI+ C M + EA + ++ M+ RG+ P H K+L
Sbjct: 640 NFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Query: 361 NDEFKKRGMTALAQKL 376
+ K + + L L
Sbjct: 700 GKDCKLQAVRQLESLL 715
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 7/349 (2%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
++D + G V VS +LI Y++ MVE + F+ + + + + I
Sbjct: 149 IVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRI 208
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L D + + A E + E PT+ YN LL+ + + V+ EM++
Sbjct: 209 LRD----KDLMSKAVEVYRTMGEF--GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQR 262
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
PN VTY L+ G + ++A L+ EM K G++ +A YN +I G G E
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E ++ PT+ TY S + G CK G + A + L M++ LP +YN
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ + G + A L+ ++ P +TY+ LL LC++ +L++A Q+ EM G
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL-VPHYLTFKRLNDEFK 365
D+ T T+L++ C+M A F++M+ GL + Y R+ E K
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 14/360 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS----------GASLFEILLDS 81
S+ F ++ A+ ++ +A W E N +M + D + ++L+
Sbjct: 114 SEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWV 173
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV-KDAERFWLEMRKENV 140
K+ V+ F K + +P V+ N +L R K++ A + M + +
Sbjct: 174 YSKKSMVEQCLSVFDKM--IKSRLSPDVKNCNRILR-ILRDKDLMSKAVEVYRTMGEFGI 230
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P +VTY TL++ YC+ +V + + L+ EM++ G PN + YN +I+GL + G FE+ G
Sbjct: 231 KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKG 290
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ L + TY L+ GY G L A + + M+ +G P+ TYN F
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLC 350
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G++ DAM M+ + PD ++Y+ L+ C+ L A + E++ +
Sbjct: 351 KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T L+ LCR + + A +MI G+ P +T+ L + K G ++AQ+ + M
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 33/212 (15%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK-------------------------- 97
+ K F ++ +++D LCK G ++ ASE K
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL 565
Query: 98 RKE-------LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
RK L + P+V Y +L++G ++ A ++ EM+++ + PNV+TY +L
Sbjct: 566 RKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSL 625
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G C++RR+D+A EM ++GI PN Y +I+ G ++E + ++ L
Sbjct: 626 INGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGV 685
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
P T+++L+K K L+ ++ ++ S
Sbjct: 686 QPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 26/263 (9%)
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR-AIRLVKEMRKE-GIEP 177
R K + +WL P +V V R R A+RL + + G
Sbjct: 57 IREKPSNFSNYYWLS---HQFGPVIVDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRR 113
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ V+ +++ L + +MER + M ++ G C + ++ + KIL
Sbjct: 114 SEFVFCAILEILAQNNLMRSAYWVMERVI----NANMHRIVDVLIGGCVSSEV--SVKIL 167
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
++I +SK VE ++++ KMI+S +PD + +L+IL +
Sbjct: 168 DLLI---------------WVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDK 212
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D + A++V + M G + T L+ C+ K + +M RRG P+ +T+
Sbjct: 213 DLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY 272
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
L + K+G A+ L M
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEM 295
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 161/299 (53%), Gaps = 9/299 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW--APTVRVYNILLNGWFR---SKNVKDAE 129
F I ++ LC+ G++ A + K +W +P V YN L++G+ + + + AE
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMK----AWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
F EM + PN VT+ TL++G+C+ V A + +EM+K+G++PN + YN++I+GL
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ EE + ++ + P +VTY +L+ G+CK ++ A+K+ + + +P+
Sbjct: 319 CNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNV 378
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
T+N + K G +E+ +L M++ G P+ TY+ L+ LC++ L A ++ E
Sbjct: 379 ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE 438
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M+ +G D+ T +LI LC+ K A +M GL P+++T+ L D + G
Sbjct: 439 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEG 497
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 150/300 (50%), Gaps = 10/300 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D CK V AA + F + ++ Q P + YN L+NG + +++A W +
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQK--QGLKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN+VTY L+ G+C+ + + A ++ ++ K+ + PN I +NT+ID + G
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393
Query: 195 FEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
EE S M++ ++ P + TY L+ G C+ DL+ A ++L M ++G
Sbjct: 394 MEEGFSLCSSMLDEGIL----PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 449
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K K +A L +M G P+ +TY+ L+ C E KL A+ V M
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM 509
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ ++ T +LI C++ K + A+ +M+ +GL P+ T+ + E ++G +
Sbjct: 510 EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFS 569
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 148/312 (47%), Gaps = 40/312 (12%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + ++L+ + K + A E F + K D + ++ N LL+ + + D E
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAK--DYGFKLSLTSCNPLLSALVKENKIGDVEYV 187
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM K + N+ T+ + G CR ++++A +++M+ GI PN + YNT++DG +
Sbjct: 188 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCK 247
Query: 192 ---AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
AG+ + M+ L + P VT+ +L+ G+CK ++ A K + M +G P+
Sbjct: 248 RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN GK+E+A++L+ KM+ G P+ +TY+ L+ CK+ K
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK----------K 357
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
MK EA+ F+D+ ++ LVP+ +TF + D + K G
Sbjct: 358 MMK-------------------------EATKVFDDVSKQELVPNVITFNTMIDAYCKEG 392
Query: 369 MTALAQKLCNVM 380
M LC+ M
Sbjct: 393 MMEEGFSLCSSM 404
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 48/309 (15%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
+L +KI +EV TF LI + + V AA FE + N + +
Sbjct: 264 MLANKICPNEV-------TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVT----YN 312
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L++ LC G+++ A + + K L P + YN L+NG+ + K +K+A + + ++
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGL--GLKPNIVTYNALINGFCKKKMMKEATKVFDDVS 370
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA----------------- 179
K+ + PNV+T+ T+++ YC+ ++ L M EGI PN
Sbjct: 371 KQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQ 430
Query: 180 ------------------IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+ YN +IDGL + + ++ P VTY +L+
Sbjct: 431 AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
GYC G L+ A + M P+ TYN + + K K+E A L +M+E G
Sbjct: 491 DGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Query: 282 PDRLTYHIL 290
P+R TY I+
Sbjct: 551 PNRTTYDIV 559
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D LCK + + A + ++ L P YN L++G+ +K A
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNL--GLKPNHVTYNTLMDGYCMEGKLKAALNVRTR 508
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M KE PNVVTY L++GYC++ +++ A L+ EM ++G+ PN Y+ V ++E G
Sbjct: 509 MEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGF 568
Query: 195 FEEVSGMM 202
++ G +
Sbjct: 569 SPDIEGHL 576
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 35/240 (14%)
Query: 164 IRLVKEMRKE-----GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE--------- 209
+R K +KE G+EP + V+ L + R+ +V ++ F+ E
Sbjct: 62 LRFFKWSQKEYRLSYGLEPTS----KVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFH 117
Query: 210 --------PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
PG T + LV Y K +L A + GF S T+ N K
Sbjct: 118 SLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVK 177
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
K+ D +Y++MI+ + T++I + LC+ KL+ A ++MK G ++ T
Sbjct: 178 ENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVT 237
Query: 322 STMLIHLLC------RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
L+ C +MYK A A ++M+ + P+ +TF L D F K A A+K
Sbjct: 238 YNTLVDGYCKRGSAGKMYK---AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKK 294
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 165/315 (52%), Gaps = 2/315 (0%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
++ +F LL+ LC + RV A E + E+ PT+ N L+NG + V D
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK--PTLITLNTLVNGLCLNGKVSD 211
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A M + PN VTYG ++ C+ + A+ L+++M + I+ +A+ Y+ +ID
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL + G + + + ++TY +L+ G+C AG + +K+L+ MI R P
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ T++ F K GK+ +A L ++M++ G P+ +TY+ L+ CKE++L+ AIQ+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M +GCD D+ T +LI+ C+ + D+ F +M RG++ + +T+ L F +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 368 GMTALAQKLCNVMSS 382
G +A+KL M S
Sbjct: 452 GKLEVAKKLFQEMVS 466
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 149/273 (54%), Gaps = 2/273 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N A + I++D LCK G + A F++ + + + + YN L+ G+ +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI--KGFKADIITYNTLIGGFCNAGRW 314
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
D + +M K ++PNVVT+ L++ + + ++ A +L+KEM + GI PN I YN++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG + R EE M++ + P ++T+ L+ GYCKA ++ ++ + M RG
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ + TYN + F + GK+E A L+++M+ PD ++Y ILL LC +L+ A++
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
+ +++ ++D+ ++IH +C K D+A
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC G+V A + E + P Y +LN +S A +M +
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVE--TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
N+ + V Y +++G C+ +D A L EM +G + + I YNT+I G AGR+++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ ++ + + P +VT++ L+ + K G L A ++LK M+ RG P+ TYN
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K ++E+A+ + MI G PD +T++IL+ CK +++D +++ +EM RG
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ T L+ C+ K + A F++M+ R + P +++K L D G
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 161/325 (49%), Gaps = 6/325 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++ +K F + + L+ C GR ++
Sbjct: 266 YSIIIDGLCKDGSLDNA---FNLFNEME-IKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + +P V +++L++ + + +++A++ EM + + PN +TY +L++G+C
Sbjct: 322 --RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ R++ AI++V M +G +P+ + +N +I+G +A R ++ + + V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +LV+G+C++G LE A K+ + M+SR P +Y G++E A+ ++ K+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y I++ +C K+D A + + +G +D ++I LCR
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
+A F M G P LT+ L
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNIL 584
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV +N L + ++K + +M + + ++ T ++ +CR R++ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EP+ +++NT+++GL R E +++R + PT++T +LV G C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++ M+ GF P+ TY K G+ AM L RKM E D +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK+ LD A + EM+ +G D+ T LI C ++D+ + DMI
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
+R + P+ +TF L D F K G A +L M P ++ L+D CK+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 165/366 (45%), Gaps = 48/366 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K D+A+ L + +I G + D ++ +T + G A W
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKA-DIITYNTLI--------GGFCNAGRWDDGAK 319
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
DM+K F +L+DS K+G+++ A + ++ + + AP YN L++G
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL--KEMMQRGIAPNTITYNSLIDG 377
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +++A + M + P+++T+ L+ GYC+ R+D + L +EM G+ N
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-- 236
+ YNT++ G ++G+ E + + + P +V+Y L+ G C G+LE A +I
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 237 ------------LKMMISRGF---------------LP------SPTTYNYFFRYFSKFG 263
+ M+I G LP YN +
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ A L+RKM E G+ PD LTY+IL++ +D A ++ +EMK G D+ T
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 324 MLIHLL 329
M+I++L
Sbjct: 618 MVINML 623
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT++ + L K E + K M S+G S T + F + K+ A
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF 143
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+++ GY PD + ++ LL LC E ++ A+++ M G L T L++ L
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSV 383
C K +A + M+ G P+ +T+ + + K G TALA +L N+
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 384 PRSMELLDSRCKD 396
+ ++D CKD
Sbjct: 264 VKYSIIIDGLCKD 276
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA++L+R MI+S P + ++ L + K + +L + + K+M+ +G + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++I+ CR K A + +++ G P + F L
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 193/376 (51%), Gaps = 20/376 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L+KA + + A LL+ G PD V TF I Y++ G M EAA + E
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAV---TFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
++ M N L+ +L++ K G + A F + L P V+ + ++G
Sbjct: 571 DHGLMPNN-----PLYTVLINGHFKAGNLMEALSIFRRLHAL--GVLPDVQTCSAFIHGL 623
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ V++A + + E++++ + P+V TY +L+ G+C+ V++A L EM +GI PN
Sbjct: 624 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683
Query: 180 IVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+YN ++DGL ++G + GM E+ L P VTY++++ GYCK+ ++ A
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGL----EPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M S+G P YN K G +E AMNL+R+M++ G+ L+++ L+ C
Sbjct: 740 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYC 798
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K K+ A Q+ +EM + D T T +I C+ K +EA+ F++M R L+ +
Sbjct: 799 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 858
Query: 356 TFKRLNDEFKKRGMTA 371
T+ L + K G ++
Sbjct: 859 TYTSLMYGYNKLGQSS 874
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 179/368 (48%), Gaps = 13/368 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD T+ LI + + G VE A FE + + +K ++ L+D LCK G
Sbjct: 645 VPDVF---TYSSLISGFCKQGEVEKA---FELHDEM-CLKGIAPNIFIYNALVDGLCKSG 697
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + F E + P Y+ +++G+ +S+NV +A + EM + V P+
Sbjct: 698 DIQRARKLFDGMPE--KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 755
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y LV G C+ +++A+ L +EM ++G + +NT+IDG ++ + +E S + + +
Sbjct: 756 YNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMI 814
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P VTYT+++ +CKAG +E A+ + K M R + TY ++K G+
Sbjct: 815 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 874
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ L+ KM+ G PD +TY +++ CKED L A ++ E+ +G +LI
Sbjct: 875 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 934
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---V 383
LC+ EAS ++M GL P L F + G A ++ + S V
Sbjct: 935 TALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994
Query: 384 PRSMELLD 391
P + L+D
Sbjct: 995 PDTTTLID 1002
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 166/341 (48%), Gaps = 11/341 (3%)
Query: 31 VSKDTFV--ILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
V+ D F +I ++AG M EA+ + E + A F + K G+
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-----RGLKPDAVTFGAFILGYSKTGK 558
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A++YF + LD P +Y +L+NG F++ N+ +A + + V P+V T
Sbjct: 559 MTEAAKYFDEM--LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+ G + RV A+++ E++++G+ P+ Y+++I G + G E+ + + +
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + Y +LV G CK+GD++ A K+ M +G P TY+ + K V +
Sbjct: 677 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 736
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A +L+ +M G P Y+ L+ CKE ++ A+ + +EM +G L +T LI
Sbjct: 737 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNT-LID 795
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ K EAS F++MI + ++P ++T+ + D K G
Sbjct: 796 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 836
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 15/320 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ LCK G+++ A+E L P R + +L+ G+ R N+ A E
Sbjct: 371 YNVLIHGLCKFGKMEKAAEILKGMVTL--GCKPNSRTFCLLIEGYCREHNMGRALELLDE 428
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K N+ P+ V+YG ++ G C + + A +L+++M G++PN +VY+ +I GR
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE +++ P + Y +++ KAG +E AS L + RG P T+
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F +SK GK+ +A + +M++ G P+ Y +L+ K L A+ + + + G
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + IH L + + EA F ++ +GLVP T+ L F K+G
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG------ 662
Query: 375 KLCNVMSSVPRSMELLDSRC 394
V ++ EL D C
Sbjct: 663 -------EVEKAFELHDEMC 675
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 6/350 (1%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S F ILI Y R GM++ A F A N ++ + SL + LL K G ++
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLL----KCGMMELF 212
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ ++ LD V Y L+ ++ +++ A+R +EM ++ + PN Y ++
Sbjct: 213 WKVYNGM--LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVI 270
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
EG C++ +D A+ L + M ++G+ PN Y + GL A R E E
Sbjct: 271 EGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK 330
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P ++L+ G+ + GD++ +I +M+S G + TYN KFGK+E A +
Sbjct: 331 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 390
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ M+ G P+ T+ +L++ C+E + A+++ EM+ R + +I+ LC
Sbjct: 391 LKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 450
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
A+ E M GL P+ + + L + G A++L + MS
Sbjct: 451 CKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 10/291 (3%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAE 129
++ IL+ + +GR++ A R+ LD AP + YN +++ ++ +++A
Sbjct: 475 VYSILIMAYASEGRIEEA------RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ LE++ + P+ VT+G + GY + ++ A + EM G+ PN +Y +I+G
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+AG E + R P + T ++ + G K G ++ A K+ + +G +P
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ F K G+VE A L+ +M G P+ Y+ L+ LCK + A ++
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M +G + D T + +I C+ EA + F +M +G+ PH + L
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 41/372 (11%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L++ + GM+E W + LD FD + L+ +LCK G ++ A +
Sbjct: 199 LLKDLLKCGMMEL-FWKV-YNGMLDAKMGFD--VYTYTYLVGALCKTGDLRGAKRVLIEM 254
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
E + P +Y++++ G + ++ +A M ++ + PN TY + G CR +
Sbjct: 255 DE--KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAK 312
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
R++ A +EM+K G++P+ + +IDG + G +EV + + + C ++TY
Sbjct: 313 RMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYN 372
Query: 219 SLVKGYCKAGDLEGASKILKMMIS-----------------------------------R 243
L+ G CK G +E A++ILK M++ R
Sbjct: 373 VLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 432
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+PS +Y + A L KM SG P+ + Y IL+ E +++ A
Sbjct: 433 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEA 492
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ M C G D+ +I L + K +EAS ++ RGL P +TF
Sbjct: 493 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 552
Query: 364 FKKRGMTALAQK 375
+ K G A K
Sbjct: 553 YSKTGKMTEAAK 564
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 38/273 (13%)
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ S ++ D+ FW + + V + L++ Y R+ +D A + + + I +
Sbjct: 137 YSSSSILDSVLFWF---RNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISL 193
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I N+++ L++ G E + L + G + TYT LV CK GDL GA ++L
Sbjct: 194 IRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIE 253
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC---- 295
M +G P+ Y+ + G +++A+ L R M E G P+ TY I+ LC
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKR 313
Query: 296 -------------------------------KEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+E +D +++ M G I+L T +
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LIH LC+ K ++A+ + M+ G P+ TF
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY---TSLVKGYCKAGDLEGAS 234
+ +V++ +ID G +E + + F V + +++ SL+K K G +E
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANV---FFVAKNDSILISLIRCNSLLKDLLKCGMMELFW 213
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
K+ M+ TY Y K G + A + +M E G P+ Y ++++ +
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGM 273
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C+ +D A+++ + M +G + T T++ LCR + +EA FE+M + GL P Y
Sbjct: 274 CQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY 333
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
L D F + G ++ +VM S + L+
Sbjct: 334 NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 369
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 177/380 (46%), Gaps = 26/380 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGG----------------HEVPDFVSKDTFVILIRRYA 44
MI +L K K +A LL +KI H+ PD ++ F L+ YA
Sbjct: 84 MIHILTKFKHLKTAQSLL-EKIAYRDFLSTQSVLSALVRLHDDPD-INSHVFSWLVIVYA 141
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS 104
M + AI FE MV F +LL+SL K + + K +
Sbjct: 142 NTKMKQEAIQVFEHM----MVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVE 197
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ VYN+L++ +S +V+ A+ EM + V P++ TY TL+ YC+ A+
Sbjct: 198 --ANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEAL 255
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ M +EGI+P+ + YN++I G + GR E + + + + P VTYT+L+ GY
Sbjct: 256 SVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKE--IRDATPNHVTYTTLIDGY 313
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
C+ DL+ A ++ + M ++G P+ TYN R + G++ DA L +M E PD
Sbjct: 314 CRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDN 373
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+T + L+ CK + A++V M G +D T LIH C++ + D A
Sbjct: 374 VTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLS 433
Query: 345 MIRRGLVPHYLTFKRLNDEF 364
M+ G P Y T+ L D +
Sbjct: 434 MLDAGFSPSYCTYSWLVDGY 453
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + YN L++G+ + +++A R + E+R + TPN VTY TL++GYCRL +D+A+RL
Sbjct: 268 PDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHVTYTTLIDGYCRLNDLDQALRL 325
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+EM +G+ P + YN+++ L E GR + + ++ + P VT +L+ YCK
Sbjct: 326 REEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCK 385
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD++ A K+ M+ G TY F K +++ A L M+++G++P T
Sbjct: 386 IGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCT 445
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ C + + +++ E +G +D LI C+ + D A F M
Sbjct: 446 YSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQ 505
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G + + + L + K G A L + M
Sbjct: 506 EKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEM 539
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N + LV Y + AI++ + M G P+ +++ L + + V +
Sbjct: 129 NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVY 188
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++ + Y L+ CK+GD+E A +L M S+ P TYN + K
Sbjct: 189 KKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKK 248
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G +A+++ +M G PD +TY+ L+ CKE ++ A+++ KE+ R + T
Sbjct: 249 GMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTY 306
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T LI CR+ D+A E+M +GL P +T+ + + + G A KL N MS
Sbjct: 307 TTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMS 365
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 4/191 (2%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+P ++ LV Y + A ++ + M+ GF P +K +
Sbjct: 125 DPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMV 184
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+Y+KM G + Y++L+ CK ++ A + EM+ + DL T LI L
Sbjct: 185 WKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISL 244
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN-VMSSVPRSM 387
C+ EA + + M R G+ P +T+ L F K G A +L + + P +
Sbjct: 245 YCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHV 304
Query: 388 ---ELLDSRCK 395
L+D C+
Sbjct: 305 TYTTLIDGYCR 315
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 20/376 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L+KA + + A LL+ G PD V TF I Y++ G M EAA + E
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAV---TFGAFILGYSKTGKMTEAAKYFDEML 481
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
++ M N L+ +L++ K G + A F L P V+ + ++G
Sbjct: 482 DHGLMPNN-----PLYTVLINGHFKAGNLMEALSIFRHLHAL--GVLPDVQTCSAFIHGL 534
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ V++A + + E++++ + P+V TY +L+ G+C+ V++A L EM +GI PN
Sbjct: 535 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594
Query: 180 IVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+YN ++DGL ++G + GM E+ L P VTY++++ GYCK+ ++ A
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGL----EPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M S+G P YN K G +E AMNL+R+M++ G+ L+++ L+ C
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYC 709
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K K+ A Q+ +EM + D T T +I C+ K +EA+ F++M R L+ +
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 769
Query: 356 TFKRLNDEFKKRGMTA 371
T+ L + K G ++
Sbjct: 770 TYTSLMYGYNKLGQSS 785
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 179/368 (48%), Gaps = 13/368 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD T+ LI + + G VE A FE + + +K ++ L+D LCK G
Sbjct: 556 VPDVF---TYSSLISGFCKQGEVEKA---FELHDEM-CLKGIAPNIFIYNALVDGLCKSG 608
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + F E + P Y+ +++G+ +S+NV +A + EM + V P+
Sbjct: 609 DIQRARKLFDGMPE--KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 666
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y LV G C+ +++A+ L +EM ++G + +NT+IDG ++ + +E S + + +
Sbjct: 667 YNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMI 725
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P VTYT+++ +CKAG +E A+ + K M R + TY ++K G+
Sbjct: 726 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 785
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ L+ KM+ G PD +TY +++ CKED L A ++ E+ +G +LI
Sbjct: 786 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---V 383
LC+ EAS ++M GL P L F + G A ++ + S V
Sbjct: 846 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLV 905
Query: 384 PRSMELLD 391
P + L+D
Sbjct: 906 PDTTTLID 913
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 15/320 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ LCK G+++ A+E + + P R + +L+ G+ R N+ A E
Sbjct: 282 YNVLIHGLCKFGKMEKAAEIL--KGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 339
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K N+ P+ V+YG ++ G C + + A +L+++M G++PN +VY+T+I G GR
Sbjct: 340 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE +++ P + Y +++ KAG +E AS L + RG P T+
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F +SK GK+ +A + +M++ G P+ Y +L+ K L A+ + + + G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + IH L + + EA F ++ +GLVP T+ L F K+G
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG------ 573
Query: 375 KLCNVMSSVPRSMELLDSRC 394
V ++ EL D C
Sbjct: 574 -------EVEKAFELHDEMC 586
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 166/341 (48%), Gaps = 11/341 (3%)
Query: 31 VSKDTFV--ILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
V+ D F +I ++AG M EA+ + E + A F + K G+
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-----RGLKPDAVTFGAFILGYSKTGK 469
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A++YF + LD P +Y +L+NG F++ N+ +A + + V P+V T
Sbjct: 470 MTEAAKYFDEM--LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+ G + RV A+++ E++++G+ P+ Y+++I G + G E+ + + +
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + Y +LV G CK+GD++ A K+ M +G P TY+ + K V +
Sbjct: 588 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 647
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A +L+ +M G P Y+ L+ CKE ++ A+ + +EM +G L +T LI
Sbjct: 648 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNT-LID 706
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ K EAS F++MI + ++P ++T+ + D K G
Sbjct: 707 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 747
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 166/383 (43%), Gaps = 41/383 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G +E A + L N + F +L++ C++ + A E
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN----SRTFCLLIEGYCREHNMGRALEL 336
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ ++ ++ P+ Y ++NG K++ A + +M + PNVV Y TL+ GY
Sbjct: 337 LDEMEK--RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R++ A RL+ M G+ P+ YN +I L +AG+ EE S + P
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454
Query: 215 VT-----------------------------------YTSLVKGYCKAGDLEGASKILKM 239
VT YT L+ G+ KAG+L A I +
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ + G LP T + F K G+V++A+ ++ ++ E G PD TY L+ CK+ +
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A ++ EM +G ++ L+ LC+ A F+ M +GL P +T+
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
+ D + K A A L + M S
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPS 657
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 10/291 (3%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAE 129
++ L+ +GR++ A R+ LD AP + YN +++ ++ +++A
Sbjct: 386 VYSTLIMGYASEGRIEEA------RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ LE++ + P+ VT+G + GY + ++ A + EM G+ PN +Y +I+G
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+AG E + P + T ++ + G K G ++ A K+ + +G +P
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ F K G+VE A L+ +M G P+ Y+ L+ LCK + A ++
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M +G + D T + +I C+ EA + F +M +G+ PH + L
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 164/397 (41%), Gaps = 69/397 (17%)
Query: 27 VPDFVSKDTFVILIRRYARA-------GMVEAAIWT-FEFANNLDMV----KNFD-SGAS 73
VP F+ D+F IL + + G++ I T + ++ LD V +N+ S
Sbjct: 100 VPQFL--DSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPV 157
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F+IL+DS + G + A+ F K + +L R +++
Sbjct: 158 VFDILIDSYKRMGMLDEAANVFFVAKN------------DSILISLIRCNSLRS------ 199
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M ++ + PN TY + G CR +R++ A +EM+K G++P+ + +IDG + G
Sbjct: 200 -MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 258
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS----------- 242
+EV + + + C ++TY L+ G CK G +E A++ILK MI+
Sbjct: 259 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 318
Query: 243 ------------------------RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
R +PS +Y + A L KM S
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ + Y L+ E +++ A ++ M C G D+ +I L + K +EA
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
S ++ RGL P +TF + K G A K
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 475
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 174/346 (50%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI+ +A + AI E N F L+ ++G + A +
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMAN----HGLKPDEITFTTLMQGFIEEGDLNGALKM 215
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K++ L T +L+NG+ + V++A RF LE+ +E +P+ VT+ +LV G+
Sbjct: 216 --KKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGF 273
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR+ V+ A+ +V M ++G +P+ YN++I G+ + G FE+ ++++ ++ E P
Sbjct: 274 CRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ CK ++E A+ + ++++S+G LP T+N + + AM ++ +
Sbjct: 334 VTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD TY IL+ LC E +L A+ + KEM+ GC + LI LC+ +
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++A F+ M G+ +T+ L D K A +L + M
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQM 499
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G E AI + +++ + L+ +LCK+ ++AA++
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQM----ILRECSPNTVTYNTLISALCKENEIEAATDL 355
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + + P V +N L+ G SKN A + EM+ + P+ TY L++
Sbjct: 356 --ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C RR+ A+ L+KEM G NA+VYNT+IDGL ++ R E+ + ++ + +
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ G CK +E AS+++ MI G P TYN YF + G +E A ++ +
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M +G PD TY L+ LC+ ++D+A ++ + ++ +G + +I L +
Sbjct: 534 MASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK 358
E F +M+ + P LT K
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHK 617
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 191/433 (44%), Gaps = 52/433 (12%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L ++ FDS LL +P+ TF LI+ + +E + E N L
Sbjct: 65 LTQSSSFDSITTLLKQLKSSGSIPN---ATTFATLIQSFTNFHEIENLLKILE--NEL-- 117
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
F + + I L++L + ++K E H K +++ V +N+L+ ++
Sbjct: 118 --GFKPDTNFYNIALNALVEDNKLKLV-EMLHS-KMVNEGIVLDVSTFNVLIKALCKAHQ 173
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTL---------------------------------- 150
++ A EM + P+ +T+ TL
Sbjct: 174 LRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKV 233
Query: 151 -VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
V G+C+ RV+ A+R V E+ +EG P+ + +N++++G G + +++ +
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + TY SL+ G CK G+ E A +IL+ MI R P+ TYN K ++E A
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L R ++ G PD T++ L++ LC D+A+++ +EMK +GC D T ++LI L
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPRSM 387
C + EA ++M G + + + L D K A+++ + M V RS
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473
Query: 388 ----ELLDSRCKD 396
L+D CK+
Sbjct: 474 VTYNTLIDGLCKN 486
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 189/389 (48%), Gaps = 23/389 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+IK L KA + A L+L+++ H + PD + TF L++ + G + A
Sbjct: 164 LIKALCKAHQLRPAI-LMLEEMANHGLKPDEI---TFTTLMQGFIEEGDLNGA------- 212
Query: 60 NNLDMVKNFDSGASLF-----EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNI 114
L M K L ++L++ CK+GRV+ A + + E + ++P +N
Sbjct: 213 --LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE--EGFSPDQVTFNS 268
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+NG+ R NV DA M ++ P+V TY +L+ G C+L ++AI ++++M
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-PTMVTYTSLVKGYCKAGDLEGA 233
PN + YNT+I L + E + + R LV + P + T+ +L++G C + + + A
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDL-ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIA 387
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
++ + M ++G P TY+ ++++A+ L ++M SG + + Y+ L+
Sbjct: 388 MEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDG 447
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LCK +++ A ++ +M+ G T LI LC+ + +EAS + MI GL P
Sbjct: 448 LCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD 507
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T+ L F + G A + M+S
Sbjct: 508 KFTYNSLLTYFCRVGDIEKAGDIVQTMAS 536
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 182/379 (48%), Gaps = 22/379 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E ++A L + +PD TF LI+ + + A+ FE
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVC---TFNTLIQGLCLSKNQDIAMEMFEEMK 395
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGW 119
N K + IL+DSLC + R+K A KE++ S A VYN L++G
Sbjct: 396 N----KGCKPDEFTYSILIDSLCYERRLKEALMLL---KEMESSGCARNAVVYNTLIDGL 448
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S+ ++DAE + +M V+ + VTY TL++G C+ +RV+ A +L+ +M EG++P+
Sbjct: 449 CKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDK 508
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN+++ G E+ +++ P + TY +L+ G C+AG ++ ASK+L+
Sbjct: 509 FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRS 568
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK-ED 298
+ +G + +P YN + + ++ M L+R+M+E PD LT+ I+ + LC
Sbjct: 569 VQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGG 628
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI---------RRG 349
+ AI + EM +G + + L LC + ++ E +M+
Sbjct: 629 PIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSL-SMEDTLIELINMVMEKAQMSERETS 687
Query: 350 LVPHYLTFKRLNDEFKKRG 368
++ +L ++ ND G
Sbjct: 688 MIRGFLKIRKFNDALANLG 706
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 6/295 (2%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
TV +NI++N + +K A+ F M V PNVVTY T++ GYC RV+ A ++
Sbjct: 235 TVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVL 294
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
M+ G+EP++ Y ++I G+ + G+ EE SG++E+ PT VTY +L+ GYC
Sbjct: 295 DIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNK 354
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
GDL A M+ R LP+ +TYN GK+++A + + M +SG PD +TY
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITY 414
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+IL+ C+ A + EM +G L T T LI++L + + A FE +IR
Sbjct: 415 NILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIR 474
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
G P + F L D G A L M VP + L+ RC++
Sbjct: 475 EGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 37/329 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I+++ LCK+G++K A ++ + L P V YN +++G+ V+ A
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENL--GVKPNVVTYNTVIHGYCSRGRVEGARMVLDI 296
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG------ 188
M+ V P+ TYG+L+ G C+ +++ A ++++M++ G+ P A+ YNT+IDG
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGD 356
Query: 189 LVEA-----------------------------GRFEEVSGMMERFLVCEPGPTMVTYTS 219
LV+A G+ +E GM++ P +TY
Sbjct: 357 LVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNI 416
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GYC+ G+ + A + MIS+G P+ TY SK +++ A +L+ K+I G
Sbjct: 417 LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+PD + ++ L+ C LD A + KEM R D T L+ CR K +EA
Sbjct: 477 ASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAR 536
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++M RRG+ P ++++ L + KRG
Sbjct: 537 ELLKEMKRRGIRPDHISYNTLISGYSKRG 565
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 6/323 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G +E A E + ++ A + L+D C +G + A Y
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPT----AVTYNTLIDGYCNKGDLVKAFGY 363
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + ++ PTV YN+L++ F + +A+ +M + P+ +TY L+ GY
Sbjct: 364 --RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGY 421
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR +A L EM +GI+P + Y ++I L + R + + E+ + P +
Sbjct: 422 CRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDL 481
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+ + +L+ G+C G+L+ A +LK M R +P TYN + + GKVE+A L ++
Sbjct: 482 IMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKE 541
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD ++Y+ L+ K ++ A + EM G + L T LI LC+ +
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601
Query: 335 FDEASAEFEDMIRRGLVPHYLTF 357
D A ++M+ +G+ P T+
Sbjct: 602 GDLAEELLKEMVSKGITPDDSTY 624
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 143/293 (48%), Gaps = 13/293 (4%)
Query: 58 FANNLDMVKNFD-----------SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA 106
+ N D+VK F S + +L+ +L +G++ A + D
Sbjct: 351 YCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMI--KDMGDSGIV 408
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P YNIL+NG+ R N K A EM + + P +VTY +L+ + R+ A L
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+++ +EG P+ I++N +IDG G + +++ P VTY +L++G C+
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCR 528
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G +E A ++LK M RG P +YN +SK G + DA + +M+ G+ P LT
Sbjct: 529 EGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
Y+ L++ LCK + DLA ++ KEM +G D T LI + ++ EAS
Sbjct: 589 YNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+ + L++ C+ + A + MM +G +P T+N F K + E LY +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226
Query: 275 MIESGYTPDRLTYHILLKILCKEDKL-----------DLAIQ------------------ 305
M T++I++ +LCKE KL +L ++
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 306 ------VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
V MK RG + D T LI +C+ K +EAS E M GL+P +T+
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 360 LNDEFKKRG 368
L D + +G
Sbjct: 347 LIDGYCNKG 355
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 158/295 (53%), Gaps = 6/295 (2%)
Query: 69 DSG-ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
+SG A +F LLD+LCK G VK A+ F +++ + PT++ + LL GW R + +
Sbjct: 81 ESGVAHVFGCLLDALCKNGSVKEAASLF---EDMRIRFTPTLKHFTSLLYGWCREGKLME 137
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A+ +++R+ P++V Y L+ GY ++ A L+KEMR++ EPN + + T+I
Sbjct: 138 AKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQ 197
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
L + EE + C VTYT+L+ G+CK G + ++L MI +G +P
Sbjct: 198 ALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIP 257
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+P TY + K ++E+ + L +M + G TPD Y+I++++ CK ++ ++V
Sbjct: 258 NPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVW 317
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHYLTFKRL 360
EM+ G LDT ++IH EA F++M+ RGL+ P Y T K L
Sbjct: 318 NEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKEL 372
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 20/271 (7%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAER------FWLEMRKENVT--PNVVTYGTLVEGYCRLR 158
P R+ N F KN +ER LE +EN T N + VE R+
Sbjct: 12 PNHRLSN------FGDKNCTISERRGGFGLVRLESNRENCTYDQNYDEFSADVEKVYRIL 65
Query: 159 RV--DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
R R +L +++ G+ A V+ ++D L + G +E + + E + PT+
Sbjct: 66 RKFHSRVPKLELALQESGV---AHVFGCLLDALCKNGSVKEAASLFEDMRI-RFTPTLKH 121
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+TSL+ G+C+ G L A +L + GF P YN ++ GK+ DA +L ++M
Sbjct: 122 FTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMR 181
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
P+ +++ L++ LC + K++ A++V EM+ GC D T T LI C+ K
Sbjct: 182 RKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKIS 241
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ ++MI++G +P+ +T+ + +K+
Sbjct: 242 KGYELLDNMIQQGHIPNPMTYLHIMAAHEKK 272
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 9/341 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V + LI + + G + AA F ++ D+ + + + ++ C+ G
Sbjct: 348 LPDTV---VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT----YTAIISGFCQIG 400
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + FH+ + P + L+NG+ ++ ++KDA R M + +PNVVT
Sbjct: 401 DMVEAGKLFHEM--FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL++G C+ +D A L+ EM K G++PN YN++++GL ++G EE ++ F
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
VTYT+L+ YCK+G+++ A +ILK M+ +G P+ T+N F G +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D L M+ G P+ T++ L+K C + L A + K+M RG D T L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
C+ EA F++M +G T+ L F KR
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 184/366 (50%), Gaps = 14/366 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LLL ++ G+ PD +S T ++ Y R G ++ E K + ++
Sbjct: 269 LLLMELKGY-TPDVISYST---VVNGYCRFGELDKVWKLIEVMKR----KGLKPNSYIYG 320
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ LC+ ++ A E F + + Q P VY L++G+ + +++ A +F+ EM
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEM--IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++TP+V+TY ++ G+C++ + A +L EM +G+EP+++ + +I+G +AG +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + P +VTYT+L+ G CK GDL+ A+++L M G P+ TYN
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G +E+A+ L + +G D +TY L+ CK ++D A ++ KEM +G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR----GMTAL 372
+ T +L++ C ++ M+ +G+ P+ TF L ++ R TA+
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 373 AQKLCN 378
+ +C+
Sbjct: 619 YKDMCS 624
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 166/355 (46%), Gaps = 11/355 (3%)
Query: 47 GMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA 106
G++ A FE N +V + DS +++ L C + A F + E+ W
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDS-CNVYLTRLSKDCY--KTATAIIVFREFPEVGVCW- 244
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
V YNI+++ + +K+A L M + TP+V++Y T+V GYCR +D+ +L
Sbjct: 245 -NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++ M+++G++PN+ +Y ++I L + E + P V YT+L+ G+CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD+ ASK M SR P TY F + G + +A L+ +M G PD +T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L+ CK + A +V M GC ++ T T LI LC+ D A+ +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ GL P+ T+ + + K G A KL + + + L+D+ CK
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 162/338 (47%), Gaps = 13/338 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
PD + T+ +I + + G MVEA E K + + F L++ CK
Sbjct: 383 TPDVL---TYTAIISGFCQIGDMVEAGKLFHEM-----FCKGLEPDSVTFTELINGYCKA 434
Query: 86 GRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
G +K A F + Q+ +P V Y L++G + ++ A EM K + PN+
Sbjct: 435 GHMKDA---FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
TY ++V G C+ ++ A++LV E G+ + + Y T++D ++G ++ +++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L PT+VT+ L+ G+C G LE K+L M+++G P+ TT+N + +
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
++ A +Y+ M G PD TY L+K CK + A + +EMK +G + + T ++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
LI + KF EA F+ M R GL F +D
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 33/339 (9%)
Query: 75 FEILLDSLCKQGRVKAASEY----------------------FHKRKELDQSWA------ 106
+ I++ +C+ GR+K A + + ELD+ W
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 107 -----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P +Y ++ R + +AE + EM ++ + P+ V Y TL++G+C+ +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A + EM I P+ + Y +I G + G E + P VT+T L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
GYCKAG ++ A ++ MI G P+ TY K G ++ A L +M + G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ TY+ ++ LCK ++ A+++ E + G + D T T L+ C+ + D+A
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++M+ +GL P +TF L + F GM +KL N M
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE-DKLDLAIQVS 307
P ++ FF+ FG + +A ++ KM+ G + ++ L L K+ K AI V
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+E G ++ + ++IH +C++ + EA M +G P +++ + + + +
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF 294
Query: 368 GMTALAQKLCNVM 380
G KL VM
Sbjct: 295 GELDKVWKLIEVM 307
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 203/398 (51%), Gaps = 25/398 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D FV+LI Y +AG+V+ ++ F+
Sbjct: 158 IIEILGRASKLNHARCILLDMPKKGVEWD---EDLFVLLIDSYGKAGIVQESVKVFQKMK 214
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A YF+ L++ PT YNI++ G+F
Sbjct: 215 ELGVERTIKSYDALFKVIL----RRGRYMMAKRYFNAM--LNEGVMPTCHTYNIMIWGFF 268
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ EM++ ++P+VVTY T++ GY R+++++ A + EM+ IEP I
Sbjct: 269 LSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVI 328
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V GR ++ + E P VTY++L+ G C + A ++K M
Sbjct: 329 SYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEM 388
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ R P + F R + K G+++ A ++ + MI + Y +L++ CK
Sbjct: 389 VERYIAPKDNS--IFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKS 446
Query: 298 DKLDLAIQ-----VSKEMKCRGCD-IDLDTS--TMLIHLLCRMYKFDEASAEFEDMIRRG 349
D A++ + KE+ R + +++++S ++I LC + +A F ++++G
Sbjct: 447 GVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG 506
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPR 385
V + F L K G A ++ +M VPR
Sbjct: 507 -VQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPR 543
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 25/366 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P +S + +I+ Y G V+ + FE
Sbjct: 298 MINGYYRIKKMEEAEKFFVEMKGRNIEPTVIS---YTTMIKGYVSVGRVDDGLRLFEEMK 354
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ + N A + LL LC ++ A ++ +++ AP ++ L+
Sbjct: 355 SFGIKPN----AVTYSTLLPGLCDGEKMLEAQNVV--KEMVERYIAPKDNSIFMRLITCQ 408
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--------R 171
++ + A M + ++ YG L+E +C+ DRA++L+ ++
Sbjct: 409 CKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRP 468
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL---VCEPGPTMVTYTSLVKGYCKAG 228
+ +E + YN +I+ L +G+ + + + + V +P + + +L++G+ K G
Sbjct: 469 QNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDP----IAFNNLIRGHSKEG 524
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
E A +ILK+M R Y F K G+ DA MIE+G+ PD +
Sbjct: 525 APESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFR 584
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
+++ L ++ ++ A +V M +G ++D ++ L +EA + ++
Sbjct: 585 SVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNN 644
Query: 349 GLVPHY 354
G P +
Sbjct: 645 GCEPDF 650
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Query: 112 YNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
++++ N S+N A +F W+E R + T+ ++E R +++ A ++ +
Sbjct: 119 HSLVWNVLHGSRNSDHALQFFRWVE-RAGLFRHDRDTHLKIIEILGRASKLNHARCILLD 177
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 178 MPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGR 237
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A + M++ G +P+ TYN F KVE A + +M E +PD +TY+
Sbjct: 238 YMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNT 297
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ + K++ A + EMK R + + + T +I + + D+ FE+M G
Sbjct: 298 MINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFG 357
Query: 350 LVPHYLTFKRL 360
+ P+ +T+ L
Sbjct: 358 IKPNAVTYSTL 368
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 13/241 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
F L+ K+G ++A E R+E+ + Y +L+ + + DA+
Sbjct: 513 FNNLIRGHSKEGAPESAFEILKIMGRREVPRE----ADAYRLLIESFLKKGEPADAKTAL 568
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M + P+ + +++E R+ A R++ M ++G++ N + +++ L+
Sbjct: 569 DGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLR 628
Query: 193 GRFEEVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G EE G ++ + CEP + L+ C G A K+L + R + S +
Sbjct: 629 GHVEEALGRIDLLMNNGCEP-----DFDGLLSVLCAKGKTIAALKLLDFGLERDYNISFS 683
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+Y GK +A ++ K+++ G D + L++ L +E A +S+ +
Sbjct: 684 SYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMI 743
Query: 311 K 311
K
Sbjct: 744 K 744
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 9/362 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K A L D + + +PD VS +T LI Y R G + A F+ ++ +
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNT---LIYGYCRLGNLMKAFLLFDELRSIYL 405
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ + LLD LC+QG ++ A + K + +++ AP + Y IL+NG + +
Sbjct: 406 FPTIVT----YNTLLDGLCRQGELEVAQQL--KVEMINEGIAPDIVTYTILVNGSCKMGS 459
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ A+ F+ EM E + + Y T + G +L RA L +EM +G P+ I+YN
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V+DGL + G EE S ++++ + P VTYTS++ + + G L +I M+S+G
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS TY + G++E A + +M E G P+ +TY+ L+ LCK ++D A
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAY 639
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
EM +G + + T+LI+ C M + EA + ++ M+ RG+ P T L +
Sbjct: 640 NFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Query: 365 KK 366
K
Sbjct: 700 GK 701
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 7/349 (2%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
++D + G V VS +LI Y++ MVE + F+ + + + + I
Sbjct: 149 IVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRI 208
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L D + + A E + E PT+ YN LL+ + + V+ EM++
Sbjct: 209 LRD----KDLMSKAVEVYRTMGEF--GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQR 262
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
PN VTY L+ G + ++A L+ EM K G++ +A YN +I G G E
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E ++ PT+ TY S + G CK G + A + L M++ LP +YN
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ + G + A L+ ++ P +TY+ LL LC++ +L++A Q+ EM G
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL-VPHYLTFKRLNDEFK 365
D+ T T+L++ C+M A F++M+ GL + Y R+ E K
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 14/360 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS----------GASLFEILLDS 81
S+ F ++ A+ ++ +A W E N +M + D + ++L+
Sbjct: 114 SEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWV 173
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV-KDAERFWLEMRKENV 140
K+ V+ F K + +P V+ N +L R K++ A + M + +
Sbjct: 174 YSKKSMVEQCLSVFDKM--IKSRLSPDVKNCNRILR-ILRDKDLMSKAVEVYRTMGEFGI 230
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P +VTY TL++ YC+ +V + + L+ EM++ G PN + YN +I+GL + G FE+ G
Sbjct: 231 KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKG 290
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ L + TY L+ GY G L A + + M+ +G P+ TYN F
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLC 350
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G++ DAM M+ + PD ++Y+ L+ C+ L A + E++ +
Sbjct: 351 KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T L+ LCR + + A +MI G+ P +T+ L + K G ++AQ+ + M
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K F ++ +++D LCK G ++ ASE K + P Y +++ +
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM--VSDGVIPDYVTYTSIIHAHLENG 563
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ + EM + +TP+VVTY L+ G+ R++RA EM+++GI PN I YN
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I+GL + R ++ + P +YT L+ C G+ + A + K M+ R
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683
Query: 244 GFLPSPTTYNYFFRYFSKFGKVE 266
G P T++ + K K++
Sbjct: 684 GVQPDSCTHSALLKQLGKDCKLQ 706
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + A LL + +PD+V T+ +I + G + F +M
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYV---TYTSIIHAHLENGRLRKGREIF-----YEM 575
Query: 65 V-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K + +L+ +GR++ A YF + +E + P V YN L+NG + +
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE--KGILPNVITYNSLINGLCKVR 633
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ A F+ EM ++ + PN +Y L+ C + A+ L K+M G++P++ ++
Sbjct: 634 RMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHS 693
Query: 184 TVIDGLVEAGRFEEVSG 200
++ L + + + V G
Sbjct: 694 ALLKQLGKDCKLQAVHG 710
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 164/321 (51%), Gaps = 12/321 (3%)
Query: 35 TFVILIRRYARAG---MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
T+ IL+ + AG VEA + + KN L+ ++++ C+ G V+ A
Sbjct: 204 TYTILVDSLSTAGDISKVEAVVDEMK-------AKNVAGDVYLYTAVINAYCRAGNVRRA 256
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
SE F + + P R Y +L+NG+ + ++ AE +M+ V N + + T++
Sbjct: 257 SEVFDEC--VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GYCR VD A+++ M K GIE + YNT+ GL R E ++ +
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VTYT+L+ +CK GD+ A ++ + M +G +PS TYN + K G + +A
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++M + G PD TY L+ C K+D+A+++ +EMK RG + ++ T LI L +
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494
Query: 332 MYKFDEASAEFEDMIRRGLVP 352
+ +EA ++DM++ GL P
Sbjct: 495 EGRSEEAFQLYDDMLKAGLTP 515
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 10/324 (3%)
Query: 62 LDMVKN--FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L++++N ++ + IL+DSL G + + K ++ A V +Y ++N +
Sbjct: 190 LEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKA--KNVAGDVYLYTAVINAY 247
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R+ NV+ A + E + PN TYG L+ G+C++ +++ A L+ +M+ G+ N
Sbjct: 248 CRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQ 307
Query: 180 IVYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
I++NT+IDG G + +V ME+ + + TY +L G C+ + A +
Sbjct: 308 IIFNTMIDGYCRQGMVDNALKVKAAMEKMGI---ELDVYTYNTLACGLCRVNRMAEAKTL 364
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L +MI +G P+ TY K G + +A L+R+M G P +TY++++ K
Sbjct: 365 LHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIK 424
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ + A + KEM+ +G D+ T L+H C K D A FE+M RG P+ +
Sbjct: 425 KGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVA 484
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
+ L K G + A +L + M
Sbjct: 485 YTALISGLAKEGRSEEAFQLYDDM 508
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 131/270 (48%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+++++G+ +S V DA EM + V N + Y +L++ Y R + R L++ M
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GIE Y ++D L AG +V +++ + YT+++ YC+AG++
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
AS++ + G P+ TY F K G++E A L M G +++ ++ ++
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C++ +D A++V M+ G ++D+ T L LCR+ + EA MI +G+ P
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+Y+T+ L K G A++L M+
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAG 405
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 28/279 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG------R 87
T+ +LI + + G +EAA DM + +F ++D C+QG +
Sbjct: 274 TYGVLINGFCKIGQMEAAEMLLA-----DMQGRGVGHNQIIFNTMIDGYCRQGMVDNALK 328
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
VKAA E ELD V YN L G R + +A+ M ++ V PN VTY
Sbjct: 329 VKAAMEKMGI--ELD------VYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTY 380
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS----GMME 203
TL+ +C+ + A RL +EM +G P+ + YN ++DG ++ G E M +
Sbjct: 381 TTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEK 440
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ LV P + TY SLV G+C G ++ A K+ + M RG P+ Y +K G
Sbjct: 441 KGLV----PDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEG 496
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ E+A LY M+++G TPD Y L+ L +++ D+
Sbjct: 497 RSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDI 535
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 10/296 (3%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV----YNILLNGWFRSKNVKDAERFW 132
+++D CK GRV A R LD+ VR+ YN LL+ + R K+ +
Sbjct: 137 VVVDGFCKSGRVDDA------RALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELL 190
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M + V TY LV+ + + +V EM+ + + + +Y VI+ A
Sbjct: 191 EIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRA 250
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G S + + + P TY L+ G+CK G +E A +L M RG + +
Sbjct: 251 GNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIF 310
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + + G V++A+ + M + G D TY+ L LC+ +++ A + M
Sbjct: 311 NTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIE 370
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+G + T T LI + C+ EA F +M +G +P +T+ + D + K+G
Sbjct: 371 KGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKG 426
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 15/256 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG---GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I K + ++A LL D G GH ++ F +I Y R GMV+ A+
Sbjct: 278 LINGFCKIGQMEAAEMLLADMQGRGVGH------NQIIFNTMIDGYCRQGMVDNALKVKA 331
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ + + + + L LC+ R+ A H +++ P Y L++
Sbjct: 332 AMEKMGIELDVYT----YNTLACGLCRVNRMAEAKTLLHIM--IEKGVPPNYVTYTTLIS 385
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ ++ +A R + EM + P+VVTY +++GY + + A R KEM K+G+ P
Sbjct: 386 IHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVP 445
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y +++ G G+ + + E P +V YT+L+ G K G E A ++
Sbjct: 446 DVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLY 505
Query: 238 KMMISRGFLPSPTTYN 253
M+ G P + Y+
Sbjct: 506 DDMLKAGLTPDDSLYS 521
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 192 AGRFEEVSGMMERFLVCEPGP-TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AG+ + + ++ R L PG + + + +V G+CK+G ++ A +L M G +
Sbjct: 109 AGQLADAAAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNAL 168
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
YN + + L M G TY IL+ L + V EM
Sbjct: 169 CYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEM 228
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
K + D+ T +I+ CR AS F++ + G+ P+ T+ L + F K G
Sbjct: 229 KAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQM 288
Query: 371 ALAQKL 376
A+ L
Sbjct: 289 EAAEML 294
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 37/242 (15%)
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+V+P + +V+G+C+ RVD A L+ EM + G+ NA
Sbjct: 129 SVSP--LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNA------------------- 167
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ Y SL+ Y + D ++L++M + G + TY
Sbjct: 168 ----------------LCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDS 211
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
S G + + +M D Y ++ C+ + A +V E G + +
Sbjct: 212 LSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPN 271
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
T +LI+ C++ + + A DM RG+ + + F + D + ++GM A K+
Sbjct: 272 ERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKA 331
Query: 379 VM 380
M
Sbjct: 332 AM 333
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK + + A Y K +++ P YN L+ G+ + V+ AER +
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKL--VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVN 346
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
P+ TY +L++G C +RA+ L E +GI+PN I+YNT+I GL G
Sbjct: 347 AVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGL 406
Query: 195 FEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
E S M E+ L+ P + T+ LV G CK G + A ++K+MIS+G+ P
Sbjct: 407 ILEAAQLASEMSEKGLI----PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+N +S K+E+A+ + M+++G PD TY+ LL LCK K + ++ K M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM 522
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+GC +L T +L+ LCR +K D+A E+M + + P +TF L D F K G
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 12/354 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMV-EAAIWTFEFA 59
+I L E + A L + +G P+ + +T LI+ + G++ EAA E +
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNT---LIKGLSNQGLILEAAQLASEMS 418
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
K F IL++ LCK G V A + + + + P + +NIL++G+
Sbjct: 419 E-----KGLIPEVQTFNILVNGLCKMGCVSDADGLV--KVMISKGYFPDIFTFNILIHGY 471
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++A M V P+V TY +L+ G C+ + + + K M ++G PN
Sbjct: 472 STQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNL 531
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+N +++ L + ++ G++E P VT+ +L+ G+CK GDL+GA + +
Sbjct: 532 FTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 240 MISRGFLPSPT-TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M + T TYN F++ V A L+++M++ PD TY +++ CK
Sbjct: 592 MEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+DL + EM G L T +I+ LC + EA+ M+++GLVP
Sbjct: 652 NVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
++G+V+ A F + D PTV YN +++ S A + ++ MR +TP+
Sbjct: 88 RKGKVQEAVNVFERMDFYD--CEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V ++ ++ +CR R A+RL+ M +G E N + Y TV+ G E +E +
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFG 205
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L + T+ L+ CK GD++ K+L +I RG LP+ TYN+F + + G
Sbjct: 206 KMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKG 265
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+++ A+ + ++I+ G PD +TY+ L+ LCK K A ++ G + D T
Sbjct: 266 ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYN 325
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
LI C+ A + + G VP T++ L D G T A L N
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 155/344 (45%), Gaps = 9/344 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I+ L + E D+A ++ I PD V+ + + + + ++ EA ++ + N
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSK--FQEAEVYLGKLVN- 314
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ + + + L+ CK G V+ A + + P Y L++G
Sbjct: 315 ----EGLEPDSFTYNTLIAGYCKGGMVQLAERIL--VNAVFNGFVPDEFTYRSLIDGLCH 368
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
A + E + + PNV+ Y TL++G + A +L EM ++G+ P
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQT 428
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+N +++GL + G + G+++ + P + T+ L+ GY +E A +IL +M+
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMM 488
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G P TYN K K ED M Y+ M+E G P+ T++ILL+ LC+ KLD
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLD 548
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
A+ + +EMK + + D T LI C+ D A F M
Sbjct: 549 KALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 171/420 (40%), Gaps = 49/420 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLD---KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+ L +F++ +L+D +G H + + +V ++ Y R G V+ A+ FE
Sbjct: 46 IIEKLGLYGKFEAMEEVLVDMRQNVGNHML-----EGVYVGAMKNYGRKGKVQEAVNVFE 100
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ D S ++ IL+DS G A + + + + D+ P V + I +
Sbjct: 101 RMDFYDCEPTVFSYNAIMSILVDS----GYFDQAHKVYMRMR--DRGITPDVYSFTIRMK 154
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY----------------------- 154
+ R+ A R M + NVV Y T+V G+
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSL 214
Query: 155 ------------CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
C+ V +L+ ++ K G+ PN YN I GL + G + M+
Sbjct: 215 CLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV 274
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
R + P P +VTY L+ G CK + A L +++ G P TYN + K
Sbjct: 275 GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKG 334
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G V+ A + + +G+ PD TY L+ LC E + + A+ + E +G ++
Sbjct: 335 GMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI L EA+ +M +GL+P TF L + K G + A L VM S
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 185/385 (48%), Gaps = 14/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K ++ D W LL D G V+ +T IRR A A + + F+
Sbjct: 76 MVDLLGKMRQIDQMWELLSDMHG----RGLVTVETVAKSIRRLAGARRWKDVVLLFDKLE 131
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +N ++ +LLD LCK+ +++ A E F L P +NI ++GW
Sbjct: 132 DMGLERNTET----MNVLLDVLCKERKIEVAREVF---AVLSPHIPPDAYTFNIFVHGWC 184
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A EM++ P+V+TY T++E YC+ R R ++ M +G PN I
Sbjct: 185 SIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVI 244
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM- 239
Y ++ L + RFEE + R P + Y SL+ K+G L AS++ ++
Sbjct: 245 TYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVE 304
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-LCKED 298
M G + TYN F +G+ +DA+N+ ++M PD +Y LL++ L +
Sbjct: 305 MPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRG 364
Query: 299 KLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ D + E+ + +DLDT T+LIH LCR+ A F++M+ + P T
Sbjct: 365 QADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTC 424
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
L DE ++ M +++ N MSS
Sbjct: 425 VMLLDEAQRTNMETYVERIGNYMSS 449
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 166/321 (51%), Gaps = 9/321 (2%)
Query: 64 MVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV DS S + I+++ +G+V A F L+ +P V YN +++G
Sbjct: 181 MVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF-----LEMGVSPDVVTYNTIIDGL 235
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++ V AE + +M ++ V PN VTY T+++G C+ + VD A + ++M +G++P+
Sbjct: 236 CKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSN 295
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+IDGL +A + G+ ++ + P VTY +++ G CKA ++ A + +
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G P TY K V+ A ++++MI+ G P+ TY+ L+ +
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ +Q KEM + D+ T +L+ LC+ K +EA + F+ MIR+G+ P +
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475
Query: 360 LNDEFKKRGMTALAQKLCNVM 380
+ + K+G + L N+M
Sbjct: 476 MLHGYGKKGALSEMHDLLNLM 496
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 170/360 (47%), Gaps = 9/360 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+E D A + + P+ V+ +T + + + M E F
Sbjct: 231 IIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGV-----FQK 285
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+D K + ++D LCK V A F + +D+ P YN +++G
Sbjct: 286 MVD--KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM--IDRGVKPDHVTYNTIIDGLC 341
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ + AE + +M + V P+ +TY +++G C+ + VDRA + ++M +G++PN
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I G + G++EEV ++ + P + TY L+ CK G A + M
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I +G PS T Y + K G + + +L M+ +G +P+ ++ ++ K +
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D + + +MK +G ++ T LI LC++ + D+A +F MI G+ P+ + F L
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +I YA+ M++ + F + N + + L+D+LCK GRV A F
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVT----YGTLIDALCKLGRVDDAVLQF 563
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ P V+N L+ G + E +LEM + + P++V + T++ C
Sbjct: 564 NQM--INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV A RL+ M G++P+ I YNT+IDG A R +E +++ + P +V
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+Y +L+ GYCKAG ++ A + + M+ +G P TYN + G+ +A LY M
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I+S TY I+L CK + D A ++ + + +D+ T ++I L + +
Sbjct: 742 IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRK 801
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLVP +T++ + + + G
Sbjct: 802 EDAMDLFAAIPANGLVPSVVTYRLIAENLIEEG 834
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 193/425 (45%), Gaps = 44/425 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A + I P+ T+ LI Y G E + + +
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPN---NGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ + + +LLD LCK G+ A F + + P+V +Y I+L+G+
Sbjct: 428 AHDL----EPDVFTYGLLLDYLCKNGKCNEARSLFDSM--IRKGIKPSVTIYGIMLHGYG 481
Query: 121 R-------------------SKN----------------VKDAERFWLEMRKENVTPNVV 145
+ S N + + +++M+++ ++PNVV
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TYGTL++ C+L RVD A+ +M EG+ PN +V+N+++ GL ++E+V +
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L P +V + +++ CK G + A +++ M+ G P +YN ++
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRM 661
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++A+ L M+ +G P+ ++Y+ LL CK ++D A + +EM +G ++T +
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
++ L R +F EA + +MI+ + T+ + D F K A K+ + S+
Sbjct: 722 LNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDL 781
Query: 386 SMELL 390
++++
Sbjct: 782 QLDII 786
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 164/363 (45%), Gaps = 11/363 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A + I PD V+ +T +I +A ++ A F+
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNT---IIDGLCKAQAIDKAEGVFQ--- 354
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M+ K + I++D LCK V A F + +D+ P YN L++G+
Sbjct: 355 --QMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM--IDKGVKPNNGTYNCLIHGY 410
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++ + EM ++ P+V TYG L++ C+ + + A L M ++GI+P+
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+Y ++ G + G E+ ++ + P + +++ Y K ++ I
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G P+ TY K G+V+DA+ + +MI G TP+ + ++ L+ LC DK
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ ++ EM +G D+ ++ LC+ + EA + M+ GL P +++
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650
Query: 360 LND 362
L D
Sbjct: 651 LID 653
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 77/336 (22%)
Query: 108 TVRVYNILLNGWFRSKNVKDAE----RFWLEMR--KENVTPNVVTYGTLVEGYCRL---- 157
+VR N LL+ R+K ++ RF +R V P+ TY ++ +CR+
Sbjct: 42 SVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLE 101
Query: 158 -------------------------------RRVDRAIR-LVKEMRKEGIEPNAIVYNTV 185
+RV A+ L+++M + G + YNT+
Sbjct: 102 LGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTL 161
Query: 186 IDGLVEAGRFEEVSGMMERFL-----VCEP------------------------------ 210
+ GL + R EE ++ + C P
Sbjct: 162 LKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGV 221
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +VTY +++ G CKA +++ A + + M+ +G P+ TYN K +V+ A
Sbjct: 222 SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEG 281
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+++KM++ G P +TY+ ++ LCK +D A V ++M RG D T +I LC
Sbjct: 282 VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ D+A F+ MI +G+ P LT+ + D K
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C R+ A + + P + YN LL+G+ ++ + +A + E
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGM--VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFRE 705
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ VTP V TY T++ G R R A L M K + Y+ ++DG +
Sbjct: 706 MLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNC 765
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F+E + + + ++T+ ++ G K G E A + + + G +PS TY
Sbjct: 766 FDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRL 825
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G +E+ L+ M +SG P+ + L++ L ++ A ++ +
Sbjct: 826 IAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKN 885
Query: 315 CDIDLDTSTMLIHLLCR 331
++ T++MLI L R
Sbjct: 886 FSLEASTTSMLISLFSR 902
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 114/294 (38%), Gaps = 51/294 (17%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+V+ + DS C+ L PD +S +T LI + A ++ A+ + +
Sbjct: 625 RVMEARRLIDSMVCMGLK-------PDVISYNT---LIDGHCFASRMDEAVKLLDGMVSA 674
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+ N S + LL CK GR+ A F R+ L + P V YN +LNG FRS
Sbjct: 675 GLKPNIVS----YNTLLHGYCKAGRIDNAYCLF--REMLRKGVTPGVETYNTILNGLFRS 728
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
+A ++ M K ++ TY +++G+C+ D A ++ + +
Sbjct: 729 GRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITF 788
Query: 171 -----------RKE------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
RKE G+ P+ + Y + + L+E G EE+ +
Sbjct: 789 NIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEK 848
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
P +L++ G++ A L + + F +T + FS+
Sbjct: 849 SGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 162/296 (54%), Gaps = 4/296 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++DSLCK RV A ++F KE+++ P V Y L+NG S DA R
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFF---KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K+ +TPNV+TY L++ + + +V A L +EM + I+P+ + Y+++I+GL
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E + M + + +V+Y +L+ G+CKA +E K+ + M RG + + TYN
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F + G V+ A + +M G +PD TY+ILL LC +L+ A+ + ++M+ R
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+D+ T T +I +C+ K +EA + F + +GL P +T+ + +G+
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 137/269 (50%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+NI++N + V A +M K P+ VT G+LV G+CR RV A+ LV +M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G +P+ + YN +ID L + R + + P +VTYT+LV G C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A+++L MI + P+ TY+ F K GKV +A L+ +M+ PD +TY L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC D++D A Q+ M +GC D+ + LI+ C+ + ++ F +M +RGLV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +T+ L F + G AQ+ + M
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 9/317 (2%)
Query: 47 GMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW 105
G+ ++ W+ DM+K + LLD+ K G+V A E F + + S
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SI 291
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + Y+ L+NG + +A + + M + +VV+Y TL+ G+C+ +RV+ ++
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L +EM + G+ N + YNT+I G +AG ++ + P + TY L+ G C
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G+LE A I + M R TY R K GKVE+A +L+ + G PD +
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRG-----CDIDLDTSTMLIHLLCRMYKFDEASA 340
TY ++ LC + L + +MK G C + T+ L+ +M A +
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 531
Query: 341 EFEDMIRRGLVPHYLTF 357
+D I+ G+ L+
Sbjct: 532 LLKD-IKSGVCKKALSL 547
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 156 RLR--RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
RLR +++ AI L +M K P+ + +N ++ +V+ +++ V + ++ V
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ T+ ++ +C + A IL M+ G+ P T F + +V DA++L
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+E GY PD + Y+ ++ LCK +++ A KE++ +G ++ T T L++ LC
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +A+ DMI++ + P+ +T+ L D F K G A++L
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 123/275 (44%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ +N LL+ + K +M + ++ T+ ++ +C +V A+ +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + ++++G R + ++++ + P +V Y +++ CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A K + +G P+ TY + DA L MI+ TP+ +T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y LL K K+ A ++ +EM D D+ T + LI+ LC + DEA+ F+ M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+G + +++ L + F K KL MS
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 203/398 (51%), Gaps = 25/398 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D FV+LI Y +AG+V+ ++ F+
Sbjct: 158 IIEILGRASKLNHARCILLDMPKKGVEWD---EDLFVLLIDSYGKAGIVQESVKVFQKMK 214
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A YF+ L++ PT YNI++ G+F
Sbjct: 215 ELGVERTIKSYDALFKVIL----RRGRYMMAKRYFNAM--LNEGVMPTCHTYNIMIWGFF 268
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ EM++ ++P+VVTY T++ GY R+++++ A + EM+ IEP I
Sbjct: 269 LSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVI 328
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V GR ++ + E P VTY++L+ G C + A ++K M
Sbjct: 329 SYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEM 388
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ R P + F R + K G+++ A ++ + MI + Y +L++ CK
Sbjct: 389 VERYIAPKDNS--IFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKS 446
Query: 298 DKLDLAIQ-----VSKEMKCRGCD-IDLDTS--TMLIHLLCRMYKFDEASAEFEDMIRRG 349
D A++ + KE+ R + +++++S ++I LC + +A F ++++G
Sbjct: 447 GVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG 506
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPR 385
V + F L K G A ++ +M VPR
Sbjct: 507 -VQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPR 543
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 25/366 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P +S + +I+ Y G V+ + FE
Sbjct: 298 MINGYYRIKKMEEAEKFFVEMKGRNIEPTVIS---YTTMIKGYVSVGRVDDGLRLFEEMK 354
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ + N A + LL LC ++ A ++ +++ AP ++ L+
Sbjct: 355 SFGIKPN----AVTYSTLLPGLCDGEKMLEAQNVV--KEMVERYIAPKDNSIFMRLITCQ 408
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--------R 171
++ + A M + ++ YG L+E +C+ DRA++L+ ++
Sbjct: 409 CKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRP 468
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL---VCEPGPTMVTYTSLVKGYCKAG 228
+ +E + YN +I+ L +G+ + + + + V +P + + +L++G+ K G
Sbjct: 469 QNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDP----IAFNNLIRGHSKEG 524
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
E A +ILK+M R Y F K G+ DA MIE+G+ PD +
Sbjct: 525 APESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFR 584
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
+++ L ++ ++ A +V M +G ++D ++ L +EA + ++
Sbjct: 585 SVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNN 644
Query: 349 GLVPHY 354
G P +
Sbjct: 645 GCEPDF 650
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Query: 112 YNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
++++ N S+N A +F W+E R + T+ ++E R +++ A ++ +
Sbjct: 119 HSLVWNVLHGSRNSDHALQFFRWVE-RAGLFRHDRDTHLKIIEILGRASKLNHARCILLD 177
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 178 MPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGR 237
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A + M++ G +P+ TYN F KVE A + +M E +PD +TY+
Sbjct: 238 YMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNT 297
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ + K++ A + EMK R + + + T +I + + D+ FE+M G
Sbjct: 298 MINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFG 357
Query: 350 LVPHYLTFKRL 360
+ P+ +T+ L
Sbjct: 358 IKPNAVTYSTL 368
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 13/241 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
F L+ K+G ++A E R+E+ + Y +L+ + + DA+
Sbjct: 513 FNNLIRGHSKEGAPESAFEILKIMGRREVPRE----ADAYRLLIESFLKKGEPADAKTAL 568
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M + P+ + +++E R+ A R++ M ++G++ N + +++ L+
Sbjct: 569 DGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLR 628
Query: 193 GRFEEVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G EE G ++ + CEP + L+ C G A K+L + R + S +
Sbjct: 629 GHVEEALGRIDLLMNNGCEP-----DFDGLLSVLCAKGKTIAALKLLDFGLERDYNISFS 683
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+Y GK +A ++ K+++ G D + L++ L +E A +S+ +
Sbjct: 684 SYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADILSRMI 743
Query: 311 K 311
K
Sbjct: 744 K 744
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 185/385 (48%), Gaps = 14/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K ++ D W LL D G V+ +T IRR A A + + F+
Sbjct: 122 MVDLLGKMRQIDQMWELLSDMHG----RGLVTVETVAKSIRRLAGARRWKDVVLLFDKLE 177
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +N ++ +LLD LCK+ +++ A E F L P +NI ++GW
Sbjct: 178 DMGLERNTET----MNVLLDVLCKERKIEVAREVF---AVLSPHIPPDAYTFNIFVHGWC 230
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A EM++ P+V+TY T++E YC+ R R ++ M +G PN I
Sbjct: 231 SIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVI 290
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM- 239
Y ++ L + RFEE + R P + Y SL+ K+G L AS++ ++
Sbjct: 291 TYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVE 350
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-LCKED 298
M G + TYN F +G+ +DA+N+ ++M PD +Y LL++ L +
Sbjct: 351 MPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRG 410
Query: 299 KLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ D + E+ + +DLDT T+LIH LCR+ A F++M+ + P T
Sbjct: 411 QADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTC 470
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
L DE ++ M +++ N MSS
Sbjct: 471 VMLLDEAQRTNMETYVERIGNYMSS 495
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 179/373 (47%), Gaps = 19/373 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVI-LIRRYARAGMVEAAIWTFEFA 59
+++VL K + LL I +P+ + + F+ L +R G V E
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
D++ + L+ LCK + + A Y K +++ P YN L+ G+
Sbjct: 282 PKPDVIT--------YNNLIYGLCKNSKFQEAEVYLGKM--VNEGLEPDSYTYNTLIAGY 331
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V+ AER + P+ TY +L++G C +RA+ L E +GI+PN
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 180 IVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
I+YNT+I GL G E + M E+ L+ P + T+ LV G CK G + A
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLI----PEVQTFNILVNGLCKMGCVSDADG 447
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
++K+MIS+G+ P T+N +S K+E+A+ + M+++G PD TY+ LL LC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K K + ++ K M +GC +L T +L+ LCR K DEA E+M + + P +
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 356 TFKRLNDEFKKRG 368
TF L D F K G
Sbjct: 568 TFGTLIDGFCKNG 580
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 168/355 (47%), Gaps = 12/355 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMV-EAAIWTFEFA 59
+I L E + A L + +G P+ + +T LI+ + GM+ EAA + A
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNT---LIKGLSNQGMILEAA----QLA 414
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + K F IL++ LCK G V A + + + + P + +NIL++G+
Sbjct: 415 NEMSE-KGLIPEVQTFNILVNGLCKMGCVSDADGLV--KVMISKGYFPDIFTFNILIHGY 471
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++A M V P+V TY +L+ G C+ + + + K M ++G PN
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+N +++ L + +E G++E P VT+ +L+ G+CK GDL+GA + +
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 240 MISRGFLPSPT-TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M + S T TYN F++ V A L+++M++ PD TY +++ CK
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
++L + EM G L T +I+ LC + EA+ M+++GLVP
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 10/377 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K +F A L + PD + +T LI Y + GMV+ A A
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT---LIAGYCKGGMVQLAERIVGDA- 347
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ F + L+D LC +G A F++ L + P V +YN L+ G
Sbjct: 348 ---VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE--ALGKGIKPNVILYNTLIKGLS 402
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A + EM ++ + P V T+ LV G C++ V A LVK M +G P+
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N +I G + E +++ L P + TY SL+ G CK E + K M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G P+ T+N ++ K+++A+ L +M PD +T+ L+ CK L
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 301 DLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A + ++M + T ++IH A F++M+ R L P T++
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 360 LNDEFKKRGMTALAQKL 376
+ D F K G L K
Sbjct: 643 MVDGFCKTGNVNLGYKF 659
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 2/295 (0%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
++G+V+ A F + D PTV YN +++ S A + ++ MR +TP+
Sbjct: 88 RKGKVQEAVNVFERMDFYD--CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V ++ ++ +C+ R A+RL+ M +G E N + Y TV+ G E E +
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L + T+ L++ CK GD++ K+L +I RG LP+ TYN F + + G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+++ A+ + +IE G PD +TY+ L+ LCK K A +M G + D T
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
LI C+ A D + G VP T++ L D G T A L N
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 132/262 (50%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K L + + +N LL + +VK+ E+ ++ K V PN+ TY ++G C+
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+D A+R+V + ++G +P+ I YN +I GL + +F+E + + + P TY
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ GYCK G ++ A +I+ + GF+P TY G+ A+ L+ + +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ + Y+ L+K L + + A Q++ EM +G ++ T +L++ LC+M +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 339 SAEFEDMIRRGLVPHYLTFKRL 360
+ MI +G P TF L
Sbjct: 446 DGLVKVMISKGYFPDIFTFNIL 467
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 172/420 (40%), Gaps = 49/420 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLD---KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+ L +F++ +L+D +G H + + +V ++ Y R G V+ A+ FE
Sbjct: 46 VIEKLGYYGKFEAMEEVLVDMRENVGNHML-----EGVYVGAMKNYGRKGKVQEAVNVFE 100
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ D S ++ +L+DS G A + + + + D+ P V + I +
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDS----GYFDQAHKVYMRMR--DRGITPDVYSFTIRMK 154
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY----------------------- 154
+ ++ A R M + NVV Y T+V G+
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 155 ------------CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
C+ V +L+ ++ K G+ PN YN I GL + G + M+
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P P ++TY +L+ G CK + A L M++ G P TYN + K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G V+ A + + +G+ PD+ TY L+ LC E + + A+ + E +G ++
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI L EA+ +M +GL+P TF L + K G + A L VM S
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 41/324 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D CK ++K A F K +E AP R YN+++NG +++ A E
Sbjct: 10 WTIIIDGFCKANQLKQALACFEKMREF---VAPNERTYNVVVNGLCKARLTSKAYEVLKE 66
Query: 135 MRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEA 192
MR ++V P++VTY T++ G+C+ +DRA +++EM ++GI P+ + Y +V+DGL
Sbjct: 67 MRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRD 126
Query: 193 GRFEEVSGMMERFLV--CEPG----------------------------------PTMVT 216
G+ + M+ + EP P +VT
Sbjct: 127 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVT 186
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
YT+L+ G+CK+G+LE A K+L +M R +P+ TY+ K G ++ A++L+R+M
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G P+ +TY L+ LC K+D A + EM C D + L+ CR+ + +
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306
Query: 337 EASAEFEDMIRRGLVPHYLTFKRL 360
EA F++M + +P +T+ L
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCL 330
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 170/361 (47%), Gaps = 10/361 (2%)
Query: 21 KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLD 80
K+ G E PD K TF LI + A V+ A+ ++ + ++ + L+D
Sbjct: 140 KLKGVE-PD---KFTFSALITGWCNARKVDEALKLYK---EILTSSSWKPDVVTYTALID 192
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
CK G ++ A + + + P V Y+ LL+G ++ ++ A + M +
Sbjct: 193 GFCKSGNLEKAMKMLGVME--GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 250
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
PNVVTY TL+ G C +VD A L+ EM P+ + YN ++DG GR EE
Sbjct: 251 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQ 310
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK-MMISRGFLPSPTTYNYFFRYF 259
+ + P +TYT LV+G+C A LE A +L+ M + G P TY+ +
Sbjct: 311 LFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 370
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
S+ + +A ++MI P+ +TY L+ LCK ++D A++V K M + + +
Sbjct: 371 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSV 430
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
T +I LCR+ DEA M GL P +T+ L + F + G +A +L V
Sbjct: 431 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 490
Query: 380 M 380
M
Sbjct: 491 M 491
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 186/392 (47%), Gaps = 19/392 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K+ + A +L G VP+ V T+ L+ +AG ++ A+ F
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVV---TYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV-YNILLNGW 119
+ V N + + L+ LC +V AA E+ + P V YN LL+G+
Sbjct: 247 SKGCVPNVVT----YTTLIHGLCAAHKVDAARLLMD---EMTATCCPPDTVSYNALLDGY 299
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR-KEGIEPN 178
R +++A++ + EM ++ P+ +TY LV G+C R++ A L++ M+ GI+P+
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ V+ G A RF E + ++ + P VTY+SL+ G CKAG ++ A ++LK
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+++ PS T+N + G +++A L M G P +TY LL+ +
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Query: 299 KLDLAIQVSKEMKCRGCD-------IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
++++A ++ + M+ + + + LI LC+ + D+A A E++ R
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 539
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
P + D + G T A KL N +S V
Sbjct: 540 PAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 571
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 145/258 (56%), Gaps = 6/258 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV + I+++G+ ++ +K A + +MR E V PN TY +V G C+ R +A +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 167 VKEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKG 223
+KEMR + + P+ + Y+TVI+G + G + ++ R +V G P +VTYTS+V G
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEIL-REMVTRDGIAPDVVTYTSVVDG 122
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTP 282
C+ G ++ A ++++ M +G P T++ + KV++A+ LY++++ S + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +TY L+ CK L+ A+++ M+ R C ++ T + L+H LC+ D+A F
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 343 EDMIRRGLVPHYLTFKRL 360
M +G VP+ +T+ L
Sbjct: 243 RRMTSKGCVPNVVTYTTL 260
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 21/356 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KA + D A L VP+ V T+ LI A V+AA +
Sbjct: 229 LCKAGDLDQALDLFRRMTSKGCVPNVV---TYTTLIHGLCAAHKVDAARLLMDEMTATCC 285
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ S + LLD C+ GR++ A + F ++ +S P Y L+ G+ +
Sbjct: 286 PPDTVS----YNALLDGYCRLGRIEEAKQLF--KEMATKSCLPDRITYTCLVRGFCNASR 339
Query: 125 VKDAERFWLEMRK--ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+++A RF LE K + P+VVTY +V GY R +R A ++EM + PNA+ Y
Sbjct: 340 LEEA-RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+++IDGL +AGR + +++ + P++ T+ S++ C+ GD++ A K+L M +
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM--------IESGYTPDRLTYHILLKIL 294
G P TY FS+ G++E A L+ M + P++ + L++ L
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGL 517
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
CK ++D A+ V +E++ R C+ + ++ L R + +EA + + GL
Sbjct: 518 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 191/378 (50%), Gaps = 18/378 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K ++F W L+ D + ++ DTF ++ RRYARA + AI TFE
Sbjct: 126 LIEALGKIRQFKMIWTLVNDM----KQRKLLTSDTFSLVARRYARARKAKEAIKTFEKME 181
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + S F L+D LCK V+ A E F K ++L P ++ Y ILL GW
Sbjct: 182 HYGLKPH----VSDFNKLVDVLCKSKSVEEAHEVFDKMRKL--RLDPDIKSYTILLEGWS 235
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +N+ EM + +VV YG ++ +C+ ++ D AI L EM+ G+ P+
Sbjct: 236 QQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPH 295
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
VY T+I+GL R +E +E F V + P TY ++V YC + ++ A +++
Sbjct: 296 VYCTLINGLGSDKRLDEA---LEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMV 352
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI--ESGYTPDRLTYHILLKILC 295
M G P+ T++ + K ++E+A +++R+M E G P TY I++++ C
Sbjct: 353 GEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFC 412
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
E+ LD+A+ V EMK +G + + L+ LC K DEA F++M+ G+ P
Sbjct: 413 NEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAK 472
Query: 356 TFKRLNDEFKKRGMTALA 373
F L + GM +A
Sbjct: 473 MFSTLKEALVDAGMEHVA 490
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 123/282 (43%), Gaps = 1/282 (0%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
E++L+ L K + F + E + T ++ L+ + + K +M
Sbjct: 87 ELVLEVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTLVNDM 146
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
++ + + T+ + Y R R+ AI+ ++M G++P+ +N ++D L ++
Sbjct: 147 KQRKLLTS-DTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSV 205
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
EE + ++ P + +YT L++G+ + +L +++ + M +GF Y
Sbjct: 206 EEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGII 265
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K K ++A+ LY +M G P Y L+ L + +LD A++ + K G
Sbjct: 266 MNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGF 325
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ T ++ C + D+A +M + G+ P+ TF
Sbjct: 326 VPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTF 367
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 185/385 (48%), Gaps = 14/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K ++ D W LL D G V+ +T IRR A A + + F+
Sbjct: 88 MVDLLGKMRQIDQMWELLSDMHG----RGLVTVETVAKSIRRLAGARRWKDVVLLFDKLE 143
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +N ++ +LLD LCK+ +++ A E F L P +NI ++GW
Sbjct: 144 DMGLERNTET----MNVLLDVLCKERKIEVAREVF---AVLSPHIPPDAYTFNIFVHGWC 196
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A EM++ P+V+TY T++E YC+ R R ++ M +G PN I
Sbjct: 197 SIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVI 256
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM- 239
Y ++ L + RFEE + R P + Y SL+ K+G L AS++ ++
Sbjct: 257 TYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVE 316
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-LCKED 298
M G + TYN F +G+ +DA+N+ ++M PD +Y LL++ L +
Sbjct: 317 MPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRG 376
Query: 299 KLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ D + E+ + +DLDT T+LIH LCR+ A F++M+ + P T
Sbjct: 377 QADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTC 436
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
L DE ++ M +++ N MSS
Sbjct: 437 VMLLDEAQRTNMETYVERIGNYMSS 461
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 172/334 (51%), Gaps = 8/334 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ ILI ++ + G + A F N + F L++ LCK + E F
Sbjct: 226 YNILINKFCKEGSIRDAKLIF----NEIRKRGLRPTTVSFNTLINGLCKS---RNLDEGF 278
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+K ++++ P V Y++L++G + + AE+ + EM++ + PN +T+ L++G
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR RR+D A+ +M G++P+ ++YNT+++GL + G + +++ + P
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDK 398
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYT+L+ GYCK GDLE A +I K M G + + F + G+V DA R+
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E+G PD TY +++ CK+ + + ++ KEM+ G + T +L++ LC+ +
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
A+ E M+ G+ P +T+ L + K G
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 14/383 (3%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+ L K DSA + +LD G +FV F L+ Y +G V AI F
Sbjct: 123 IIRFLVSRKGKDSAASVFAAILD-TAGTRCSNFV----FDALMIAYWDSGFVSDAIQCFR 177
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
N + F L + +++S + + + L+ + P V+ YNIL+N
Sbjct: 178 LVRNSNFQIPFHGCGYLLDKMINS------NSPVTIWTFYSEILEYGFPPKVQYYNILIN 231
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + +++DA+ + E+RK + P V++ TL+ G C+ R +D RL K M + I P
Sbjct: 232 KFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYP 291
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I GL + GR + + + P +T+T+L+ G C++ ++ A
Sbjct: 292 DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTY 351
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M++ G P YN K G V A L +M G PD++TY L+ CKE
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKE 411
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A+++ K M G +D T LI CR + +A +M+ G+ P T+
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ D + K+G + KL M
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEM 494
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 12/326 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K++ D + L PD T+ +LI + G ++ A F+
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIYPDVF---TYSVLIHGLCKEGRLDVAEQLFDEMQ 320
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N F L+D C+ R+ +A +H+ L P + +YN LLNG
Sbjct: 321 QRGLRPN----GITFTALIDGQCRSRRIDSAMNTYHQM--LTMGVKPDLVMYNTLLNGLC 374
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +V A + EMR + P+ +TY TL++GYC+ ++ A+ + K M +EG+ + +
Sbjct: 375 KVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +I G GR + + + P TYT ++ GYCK G+++ K+LK M
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P TYN K G++++A L M+ G TPD +TY+ILL+ CK K
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKA 554
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ +++ E +G +D T L+
Sbjct: 555 EDLLKLRNE---KGLIVDYAYYTSLV 577
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 179/371 (48%), Gaps = 11/371 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI VL K + FD+AW L+ + G V+ T +I+IR+Y V AI TF
Sbjct: 171 MISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFK 230
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NF G F+ LL +LC+ V+ A K + + + +NI+LNGW
Sbjct: 231 RF----NFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLDTKSFNIILNGWC 283
Query: 121 R-SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++AER W EM K + +VV+Y +++ Y + ++ R ++L ++M+K I P+
Sbjct: 284 NLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDR 343
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VYN VI L + +E ++ + P +TY SL+K CKA ++ A +I +
Sbjct: 344 KVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNV 403
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ RG PS T++ FFR E+ L KM E G P TY +L++ C+ +
Sbjct: 404 MLERGISPSIRTFHAFFRILR---VKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQ 460
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD ++ M+ G D + +LIH L K +EA + +M +G +P T
Sbjct: 461 LDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESM 520
Query: 360 LNDEFKKRGMT 370
L R +T
Sbjct: 521 LQAWLSGRQVT 531
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 40/254 (15%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV----------------I 186
+V Y +++ ++RR D A LV+EMR+ + + T+ I
Sbjct: 164 SVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAI 223
Query: 187 DGLVEAGRFE------EVSGMM------------ERFLVCE----PGPTMVTYTSLVKGY 224
+ RF E G++ E L C P T ++ ++ G+
Sbjct: 224 NTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTK-SFNIILNGW 282
Query: 225 CK-AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
C A +I + M R +Y +SK K+ + L+ +M + TPD
Sbjct: 283 CNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPD 342
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
R Y+ ++ L K + A+ + +M+ D T LI LC+ K DEA F
Sbjct: 343 RKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFN 402
Query: 344 DMIRRGLVPHYLTF 357
M+ RG+ P TF
Sbjct: 403 VMLERGISPSIRTF 416
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 9/341 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V + LI + + G + AA F ++ D+ + + + ++ C+ G
Sbjct: 791 LPDTV---VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT----YTAIISGFCQIG 843
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + FH+ + P + L+NG+ ++ ++KDA R M + +PNVVT
Sbjct: 844 DMVEAGKLFHEM--FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL++G C+ +D A L+ EM K G++PN YN++++GL ++G EE ++ F
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
VTYT+L+ YCK+G+++ A +ILK M+ +G P+ T+N F G +E
Sbjct: 962 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D L M+ G P+ T++ L+K C + L A + K+M RG D T L+
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 1081
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
C+ EA F++M +G T+ L F KR
Sbjct: 1082 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 184/366 (50%), Gaps = 14/366 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LLL ++ G+ PD +S T ++ Y R G ++ E K + ++
Sbjct: 712 LLLMELKGY-TPDVISYST---VVNGYCRFGELDKVWKLIEVMKR----KGLKPNSYIYG 763
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ LC+ ++ A E F + + Q P VY L++G+ + +++ A +F+ EM
Sbjct: 764 SIIGLLCRICKLAEAEEAFSEM--IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++TP+V+TY ++ G+C++ + A +L EM +G+EP+++ + +I+G +AG +
Sbjct: 822 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + P +VTYT+L+ G CK GDL+ A+++L M G P+ TYN
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G +E+A+ L + +G D +TY L+ CK ++D A ++ KEM +G
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR----GMTAL 372
+ T +L++ C ++ M+ +G+ P+ TF L ++ R TA+
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061
Query: 373 AQKLCN 378
+ +C+
Sbjct: 1062 YKDMCS 1067
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 166/355 (46%), Gaps = 11/355 (3%)
Query: 47 GMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA 106
G++ A FE N +V + DS +++ L C + A F + E+ W
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDS-CNVYLTRLSKDCY--KTATAIIVFREFPEVGVCW- 687
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
V YNI+++ + +K+A L M + TP+V++Y T+V GYCR +D+ +L
Sbjct: 688 -NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 746
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++ M+++G++PN+ +Y ++I L + E + P V YT+L+ G+CK
Sbjct: 747 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 806
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD+ ASK M SR P TY F + G + +A L+ +M G PD +T
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L+ CK + A +V M GC ++ T T LI LC+ D A+ +M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ GL P+ T+ + + K G A KL + + + L+D+ CK
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 10/330 (3%)
Query: 35 TFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ +I + + G MVEA E K + + F L++ CK G +K A
Sbjct: 831 TYTAIISGFCQIGDMVEAGKLFHEM-----FCKGLEPDSVTFTELINGYCKAGHMKDA-- 883
Query: 94 YFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F + Q+ +P V Y L++G + ++ A EM K + PN+ TY ++V
Sbjct: 884 -FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 942
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C+ ++ A++LV E G+ + + Y T++D ++G ++ +++ L P
Sbjct: 943 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
T+VT+ L+ G+C G LE K+L M+++G P+ TT+N + + ++ A +Y
Sbjct: 1003 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 1062
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+ M G PD TY L+K CK + A + +EMK +G + + T ++LI +
Sbjct: 1063 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
KF EA F+ M R GL F +D
Sbjct: 1123 KKFLEAREVFDQMRREGLAADKEIFDFFSD 1152
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 33/339 (9%)
Query: 75 FEILLDSLCKQGRVKAASEY----------------------FHKRKELDQSWA------ 106
+ I++ +C+ GR+K A + + ELD+ W
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 107 -----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P +Y ++ R + +AE + EM ++ + P+ V Y TL++G+C+ +
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A + EM I P+ + Y +I G + G E + P VT+T L+
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
GYCKAG ++ A ++ MI G P+ TY K G ++ A L +M + G
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ TY+ ++ LCK ++ A+++ E + G + D T T L+ C+ + D+A
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++M+ +GL P +TF L + F GM +KL N M
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE-DKLDLAIQVS 307
P ++ FF+ FG + +A ++ KM+ G + ++ L L K+ K AI V
Sbjct: 618 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 677
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+E G ++ + ++IH +C++ + EA M +G P +++ + + + +
Sbjct: 678 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF 737
Query: 368 GMTALAQKLCNVM 380
G KL VM
Sbjct: 738 GELDKVWKLIEVM 750
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 34/327 (10%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K+ A F ILL LC+ +++ A + + KE+ P +YN L++G+ ++K+
Sbjct: 36 KSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEM--GCVPDDAIYNALISGYSKAKDF 93
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A +F EM K + P VVTY +V+G C+ R A++L+ EMR +G PN YN +
Sbjct: 94 GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVI 153
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK----------------------- 222
++GL E + +E M+E V P +VTY S +K
Sbjct: 154 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD 213
Query: 223 ---------GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
G CK+GDL+ AS++L M +RG P TY+ F K G+VE AM L
Sbjct: 214 VVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 273
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M++ G P+ + Y+ LL L + + A + EM+ RG D+ + I LC+
Sbjct: 274 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 333
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +A A F+ M+ RG P+ ++ L
Sbjct: 334 RVKKAKAVFDRMVERGCTPNASSYSML 360
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 5/302 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL L ++ R AS F + +D+S P + ILL G RS ++ A +
Sbjct: 10 YNKLLLQLTREHRHDKASAVFQEM--IDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGR 67
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M++ P+ Y L+ GY + + +A + + EM K P + Y ++DGL +A R
Sbjct: 68 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +++ P + TY +V+G C+ L+ A K+L+ M RG+ P TYN
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + K +V++A +M TPD ++Y ++ LCK LD A ++ M RG
Sbjct: 188 FIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ T + LI C+ + + A + M++ G P+ + + L + G A+
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 304
Query: 375 KL 376
+
Sbjct: 305 DM 306
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 138/292 (47%), Gaps = 16/292 (5%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+ V YN LL R A + EM ++ P+ T+ L+ G CR ++++A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+L+ M++ G P+ +YN +I G +A F + + + PT+VTYT++V G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
CKA A K+L M +G P+ TYN + K+++A + +M GY PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+TY+ +K LCK D++D A + M D+ + T +I+ LC+ D AS +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPVTP---DVVSYTTVINGLCKSGDLDSASRMLD 238
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCK 395
M RG P +T+ L D F K G V R+M LLDS K
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGG-------------EVERAMGLLDSMLK 277
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 161/351 (45%), Gaps = 25/351 (7%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS + +I ++G +++A + +N + + +SL +D CK G
Sbjct: 212 PDVVS---YTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL----IDGFCKGGE 264
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ A +L P + YN LL R ++ AE +EM + TP+VV+Y
Sbjct: 265 VERAMGLLDSMLKL--GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA----------IVYNTVIDGLVEAGRFEE 197
++G C+ RV +A + M + G PNA ++Y ++DGL + GRF+E
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDE 382
Query: 198 VSGMMERFL---VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + L +CEP + Y ++ +CK ++ A +I K M+ + + T+N
Sbjct: 383 ACALFSKVLDEKICEP--DVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNI 439
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ DA + M++ G+ PD +TY L+ +CK K A+++ +E G
Sbjct: 440 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
C D+ T + LI L +EA F ++ R VP T L+ + K
Sbjct: 500 CVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLK 550
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 14/350 (4%)
Query: 35 TFVILIRRYARAGMVEAA----IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+F ILI+ AG +E + I EF F ++ L+D CK+G ++
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFG--------FSPNVVIYTTLIDGCCKKGEIEK 216
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + F + +L R Y +L+NG F++ K + +M+++ V PN+ TY +
Sbjct: 217 AKDLFFEMGKL--GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ C+ R A ++ EMR+ G+ N + YNT+I GL + E + ++++
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P ++TY +L+ G+C G L A + + + SRG PS TYN F + G A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ ++M E G P ++TY IL+ + D ++ AIQ+ M+ G D+ T ++LIH C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +EAS F+ M+ + P+ + + + + K G + A KL M
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 160/318 (50%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G+ + +E + N + + +++ LCK GR K A +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT----YNCVMNQLCKDGRTKDAFQV 290
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + + + YN L+ G R + +A + +M+ + + PN++TY TL++G+
Sbjct: 291 FDEMRE--RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + ++ +A+ L ++++ G+ P+ + YN ++ G G + M++ P+
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT L+ + ++ ++E A ++ M G +P TY+ F G++ +A L++
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E P+ + Y+ ++ CKE A+++ KEM+ + ++ + +I +LC+ K
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 335 FDEASAEFEDMIRRGLVP 352
EA E MI G+ P
Sbjct: 529 SKEAERLVEKMIDSGIDP 546
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+E++++S + + + YF++ +D + P +N LL S + F+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEM--VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN 153
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E K V +V ++G L++G C ++++ L+ E+ + G
Sbjct: 154 E-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFS----------------- 195
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
P +V YT+L+ G CK G++E A + M G + + TY
Sbjct: 196 ------------------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G + +Y KM E G P+ TY+ ++ LCK+ + A QV EM+ R
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T LI LCR K +EA+ + M G+ P+ +T+ L D F G A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 374 QKLCNVMSS 382
LC + S
Sbjct: 358 LSLCRDLKS 366
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ C++G A++ + +E + P+ Y IL++ + RS N++ A + L
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEE--RGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+V TY L+ G+C +++ A RL K M ++ EPN ++YNT+I
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI-------- 485
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
GYCK G A K+LK M + P+ +Y Y
Sbjct: 486 ---------------------------LGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
K K ++A L KMI+SG P
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 6/154 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
SK T+ ILI +AR+ +E AI L +V + + + +L+ C +G++ A
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT----YSVLIHGFCIKGQMNEA 462
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
S F + ++++ P +YN ++ G+ + + A + EM ++ + PNV +Y ++
Sbjct: 463 SRLF--KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
E C+ R+ A RLV++M GI+P+ + + +
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 168/368 (45%), Gaps = 14/368 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T ILI ++ V+ A F M+K A F L++ LCK G+ A E
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFS-----KMIKLGLQPDAVTFNTLINGLCKVGKFAQAVE 186
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+F + PTV Y ++NG + A + +M + PNVVTY L++
Sbjct: 187 FFDDFEA--SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ + V+ A+ + M+ + I P+ YN++I GL R++E S ++ P
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ T+ LV CK G + A + K M G P TY+ +S ++ +A L+
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD 364
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
MI G PD +Y+IL+K CK ++D A Q+ EM +G D LIH LC++
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSM 387
+ EA F++M G +P T+ L D F K G A +L VM S +
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484
Query: 388 ELLDSRCK 395
L+D+ CK
Sbjct: 485 ILIDAMCK 492
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 176/381 (46%), Gaps = 19/381 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D A+ + I PD V TF LI + G +FA
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAV---TFNTLINGLCKVG---------KFAQ 183
Query: 61 NLDMVKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
++ +F++ + +++ LCK G AA+ F K +E P V YNIL
Sbjct: 184 AVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE--AGCQPNVVTYNIL 241
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++ + K V +A + M+ + ++P++ TY +L++G C RR A L+ EM I
Sbjct: 242 IDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNI 301
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
PN +N ++D + + G+ E G+ + P +VTY+SL+ GY ++ A K
Sbjct: 302 MPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARK 361
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ MI++G P +YN + + K ++++A L+ +MI G TPD + Y+ L+ LC
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ +L A + K M G DL T +ML+ C+ +A F M L P
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA 481
Query: 356 TFKRLNDEFKKRGMTALAQKL 376
+ L D K G A+KL
Sbjct: 482 MYNILIDAMCKFGNLKDARKL 502
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+D++CK+G+V A F E+ P V Y+ L+ G+ + +A + +
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEM--GVEPDVVTYSSLMYGYSLRMEIVEARKLFDA 365
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ +Y L++GYC+ +R+D A +L EM +G+ P+ + YNT+I GL + GR
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGR 425
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY+ L+ G+CK G L A ++ ++M S P YN
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
KFG ++DA L+ ++ G P+ Y ++ LCKE LD A++ + M+ G
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
C D + ++I + A+ +M RG V
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M ++P++ T L++ + L+RVD A + +M K G++P+A+ +NT+I+GL + G
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+F + + F PT+ TYT+++ G CK G+ A+ + K M G P+ TYN
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K V +A++++ M +PD TY+ L++ LC + A + EM
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
++ T +L+ +C+ K EA F+ M G+ P +T+ L + R A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359
Query: 374 QKLCNVM 380
+KL + M
Sbjct: 360 RKLFDAM 366
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ CK R+ A + F++ + Q P YN L++G + +++A+ +
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEM--IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKN 435
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P++ TY L++G+C+ + +A RL + M+ ++P+ +YN +ID + + G
Sbjct: 436 MHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN 495
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + V P + YT+++ CK G L+ A + + M G P +YN
Sbjct: 496 LKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNV 555
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
R F ++ A L +M + G+ + T
Sbjct: 556 IIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 193/440 (43%), Gaps = 70/440 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI LAKA A +L + + VP V T+ IL+ +AG +E A F
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEV---TYGILVNSLCKAGTLERAEELFRVM- 321
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F + ++ L+ K GR+K A F + E + P V + ++++G
Sbjct: 322 ---AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE--AGYRPDVITHTVMIDGLC 376
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S N + A + + EM + PNVVTY T+++G ++ RV A R++K M G P+++
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK------------------ 222
Y ++DG + GR +E + +++ C P + Y+SLVK
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQ 496
Query: 223 ------------------GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF--SKF 262
G CK G L+ A +I + M+S G P TTYN S+
Sbjct: 497 SKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+VE A L + GY PD +TY L LCK ++D A+++ +E RG + D+
Sbjct: 557 NRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAY 616
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF----------KRLN------DEFKK 366
T L LC + D A + F++M+R+G P + K+L DE
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIG 676
Query: 367 RGM-------TALAQKLCNV 379
+G TAL Q LC+
Sbjct: 677 KGQKPTVATYTALVQALCHA 696
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 177/389 (45%), Gaps = 43/389 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L K + + + + + P+ S F ILIR +AR + A+ FE
Sbjct: 125 LMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS---FNILIRSFARTRRADDAVTCFEIMK 181
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K F IL+D LCK G + A E FH+ ++ G+
Sbjct: 182 R----KRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE----------------MMAMGF- 220
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V P+ + +V + +RV A + +M K G P+AI
Sbjct: 221 -------------------VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+IDGL +AG +E +++ L PT VTY LV CKAG LE A ++ ++M
Sbjct: 262 AYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF P+ Y F+K G++++A +L+ +M+E+GY PD +T+ +++ LCK
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A + +EM GC ++ T T +I L ++ + A + MI G P +T+ L
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
D F K G A +L + + S L
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNL 470
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 168/369 (45%), Gaps = 44/369 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD TF+IL+ +AGM E A FE + + + +L ++ +L K R
Sbjct: 187 PDL---HTFLILVDCLCKAGMDEKA---FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
VK A E F + ++ + P YN +++G ++ + ++A + M + P VTY
Sbjct: 241 VKEAREVFGQMEKC--GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
G LV C+ ++RA L + M G PN+++Y ++I G ++GR +E + + +
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++T+T ++ G CK+G+ E A+K + M+ G P+ TY + SK G+V +
Sbjct: 359 AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRG------------ 314
A + + MI G PD +TY LL CK +LD A Q+ E+ KC
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVK 478
Query: 315 --CD---------------------IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CD +D +I LC+ + DEA F+ M+ G
Sbjct: 479 GLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 352 PHYLTFKRL 360
P T+ L
Sbjct: 539 PDATTYNIL 547
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 173/389 (44%), Gaps = 19/389 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L+K +A+ ++ I PD V T++ L+ + + G ++ A + +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSV---TYICLLDGFCKLGRLDEAAQLLDELD 462
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAA-SEYFHKRKELDQSWAPTVRVYNILLNGW 119
N L+ L+ LC G V+ + F + K ++ P + I+ G
Sbjct: 463 KCSSSPNL----QLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV--GL 516
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR--RVDRAIRLVKEMRKEGIEP 177
++ + +A R + M E P+ TY L+ G CR R RV+RA L+ ++ G P
Sbjct: 517 CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLP 576
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+A+ Y + GL + G + M+E +V YT+L G C G ++ A +
Sbjct: 577 DAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M+ +G P Y K K+EDA + +MI G P TY L++ LC
Sbjct: 637 QEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHA 696
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTM----LIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+D A + M RG +L S M LIH C+ K D A FEDMI RG VP
Sbjct: 697 GNVDEAFHRFEGMLARG---ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPT 753
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+T L D + G T AQ+L M++
Sbjct: 754 AVTSASLFDGLVRSGKTEKAQELLQEMAA 782
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 178/446 (39%), Gaps = 72/446 (16%)
Query: 15 WCLLLDKIGG--------------------HEVPDFVSKDTFVILIRRYARAGMVEAAIW 54
W LLLD+ GG H PDFV + V I + ++ + W
Sbjct: 9 WLLLLDRGGGRAIVRHYTARSFPSGKPEREHLTPDFVRRADLVTSIVETIKDVRLDGSSW 68
Query: 55 TFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNI 114
+ N+ + S +L SL +V + F + + V YN
Sbjct: 69 SVHNIRNVLGPVHGQVLGSHVAAVLRSL----KVTGTAISFFRWAGEQAGFQHDVFTYNC 124
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+N KN EM K + PN ++ L+ + R RR D A+ + M+++
Sbjct: 125 LMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKR 184
Query: 175 IEPNAIVYNTVIDGLVEAGRFE-------------------------------------- 196
+P+ + ++D L +AG E
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244
Query: 197 -EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
EV G ME+ C P + Y +++ G KAG + A K+L M+++ +P+ TY
Sbjct: 245 REVFGQMEK---CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K G +E A L+R M SG+ P+ + Y L+ K ++ A + EM G
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D+ T T++I LC+ F++A+ FE+M+R G P+ +T+ + K G A A +
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421
Query: 376 LCNVM---SSVPRSME---LLDSRCK 395
+ M P S+ LLD CK
Sbjct: 422 IMKGMIAHGCFPDSVTYICLLDGFCK 447
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 144/331 (43%), Gaps = 8/331 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L++ G VE + F + +N D G L ++ LCK GR+ A F +
Sbjct: 476 LVKGLCDGGSVENTLDDL-FEQSKAAAENLDPG--LCCSIIVGLCKTGRLDEACRIFQRM 532
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT--PNVVTYGTLVEGYCR 156
+ + P YNIL+NG RS+ + F L E V P+ VTY L G C+
Sbjct: 533 --VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCK 590
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
+ VDRA+++++E G + + Y + GL G+ + + + + P
Sbjct: 591 IGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAA 650
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y ++ G K LE A K MI +G P+ TY + G V++A + + M+
Sbjct: 651 YCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGML 710
Query: 277 ESG-YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G + Y L+ CK K+D A+++ ++M RG TS L L R K
Sbjct: 711 ARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKT 770
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++A ++M G PH TF + D +K
Sbjct: 771 EKAQELLQEMAAGGSPPHAATFTAILDGLRK 801
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 50/278 (17%)
Query: 1 MIKVLAKAKE--FDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L +++E + A+ LL D +PD V T+ L + G V+ A+ E
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEMVGYLPDAV---TYTPLCIGLCKIGEVDRAVKMLEE 603
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A++ + +++ + L LC QG+V A F + + Q AP Y ++NG
Sbjct: 604 ASS----RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM--VRQGGAPDAAAYCCIING 657
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE-------------------------- 152
+ K ++DA +F+ EM + P V TY LV+
Sbjct: 658 LIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG 717
Query: 153 ----------GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
G+C+ +VD A++L ++M G P A+ ++ DGLV +G+ E+ ++
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ P T+T+++ G K+ + + K+LK++
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRKSDE---SGKLLKLV 812
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 172/350 (49%), Gaps = 12/350 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + T+ +LI Y ++G ++ A+ E + V +++ +L SLC G
Sbjct: 173 VPDVI---TYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNT-------ILRSLCDSG 222
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++K A E + +L + P V Y IL+ V A + EMRK+ P+VVT
Sbjct: 223 KLKEAMEVLDR--QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 280
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G C+ R+D AI+ + M G +PN I +N ++ + GR+ + ++ L
Sbjct: 281 YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P++VT+ L+ C+ L A +L+ M G +P+ +YN F + K++
Sbjct: 341 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMD 400
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ M+ G PD +TY+ LL LCK+ K+D A+++ ++ +GC L T +I
Sbjct: 401 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
L ++ K + A E+M R+GL P +T+ L + G A K+
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKI 510
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 158/352 (44%), Gaps = 42/352 (11%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
++F+ AS I L L + G ++ ++ + + Q P V L+ G+ RS
Sbjct: 102 RSFEEFAS--NIHLRKLVRNGELEEGLKFLERM--IYQGDIPDVIACTSLIRGFCRSGKT 157
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K A R + P+V+TY L+ GYC+ +D+A+ +++ M + P+ + YNT+
Sbjct: 158 KKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTI 214
Query: 186 IDGLVEAGRFEEVSGMMERFLV--CEPG-------------------------------- 211
+ L ++G+ +E +++R L C P
Sbjct: 215 LRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC 274
Query: 212 -PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +VTY L+ G CK G L+ A K L M S G P+ T+N R G+ DA
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L M+ G +P +T++IL+ LC++ L AI V ++M GC + + L+H C
Sbjct: 335 LLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFC 394
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ K D A E M+ RG P +T+ L K G A ++ N +SS
Sbjct: 395 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS 446
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 9/299 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LI + G ++ AI +F NN+ I+L S+C GR
Sbjct: 276 PDVV---TYNVLINGICKEGRLDEAI---KFLNNMPSY-GCKPNVITHNIILRSMCSTGR 328
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A L + +P+V +NIL+N R + + A +M K PN ++Y
Sbjct: 329 WMDAERLLSDM--LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSY 386
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G+C+ +++DRAI ++ M G P+ + YNT++ L + G+ + ++ +
Sbjct: 387 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS 446
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +++ G K G E A ++L+ M +G P TY+ R + GKV++
Sbjct: 447 KGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDE 506
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ ++ M P +TY+ ++ LCK + AI M +GC T T+LI
Sbjct: 507 AIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 162/296 (54%), Gaps = 4/296 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++DSLCK RV A ++F KE+++ P V Y L+NG S DA R
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFF---KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K+ +TPNV+TY L++ + + +V A L +EM + I+P+ + Y+++++GL
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHD 309
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E + M + + +V+Y +L+ G+CKA +E K+ + M RG + + TYN
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F + G V+ A + +M G +PD TY+ILL LC +L+ A+ + ++M+ R
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+D+ T T +I +C+ K +EA + F + +GL P +T+ + +G+
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 137/269 (50%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+NI++N + V A +M K P+ VT G+LV G+CR RV A+ LV +M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G +P+ + YN +ID L + R + + P +VTYT+LV G C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A+++L MI + P+ TY+ F K GKV +A L+ +M+ PD +TY L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC D++D A Q+ M +GC D+ + LI+ C+ + ++ F +M +RGLV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +T+ L F + G AQ+ + M
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 9/317 (2%)
Query: 47 GMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW 105
G+ ++ W+ DM+K + LLD+ K G+V A E F + + S
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SI 291
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + Y+ L+NG + +A + + M + +VV+Y TL+ G+C+ +RV+ ++
Sbjct: 292 DPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L +EM + G+ N + YNT+I G +AG ++ + P + TY L+ G C
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G+LE A I + M R TY R K GKVE+A +L+ + G PD +
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRG-----CDIDLDTSTMLIHLLCRMYKFDEASA 340
TY ++ LC + L + +MK G C + T+ L+ +M A +
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 531
Query: 341 EFEDMIRRGLVPHYLTF 357
+D I+ G+ L+
Sbjct: 532 LLKD-IKSGVCKKALSL 547
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 156 RLR--RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
RLR +++ AI L +M K P+ + +N ++ +V+ +++ V + ++ V
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ T+ ++ +C + A IL M+ G+ P T F + +V DA++L
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+E GY PD + Y+ ++ LCK +++ A KE++ +G ++ T T L++ LC
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +A+ DMI++ + P+ +T+ L D F K G A++L
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 123/275 (44%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ +N LL+ + K +M + ++ T+ ++ +C +V A+ +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + ++++G R + ++++ + P +V Y +++ CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A K + +G P+ TY + DA L MI+ TP+ +T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y LL K K+ A ++ +EM D D+ T + L++ LC + DEA+ F+ M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+G + +++ L + F K KL MS
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V + +I + + G V AA F+ +V + + S+ + +CK G+
Sbjct: 345 PDNV---VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSV----IHGICKSGK 397
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E F++ L + P Y L++G+ ++ +K+A +M ++ +TPNVVTY
Sbjct: 398 MVEAREMFNEM--LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTY 455
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L +G C+ +D A L+ EM ++G++PN YNT+++GL + G E+ +ME +
Sbjct: 456 TALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDL 515
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +TYT+L+ YCK G++ A ++L++M+++ P+ T+N F G +ED
Sbjct: 516 AGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLED 575
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L M+E G P+ T++ L+K C ++ + ++ K M RG D +T +LI
Sbjct: 576 GERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIK 635
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ EA ++M+ +G T+ L F KR A+KL
Sbjct: 636 GHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKL 684
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 180/368 (48%), Gaps = 12/368 (3%)
Query: 13 SAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDS 70
SA C L D++ + VPD V T+ +I ++G MVEA E N + +VK +
Sbjct: 364 SAACKLFDEMRRKKIVPDIV---TYTSVIHGICKSGKMVEAR----EMFNEM-LVKGLEP 415
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+ L+D CK G +K A + + + + P V Y L +G ++ + A
Sbjct: 416 DEVTYTALIDGYCKAGEMKEA--FSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
EM ++ + PNV TY T+V G C++ +++ ++L++EM G P+ I Y T++D
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G + ++ L PT+VT+ L+ G+C +G LE ++++ M+ +G +P+ T
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+N + + + +Y+ M + G PD TY+IL+K CK + A + KEM
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G + T LI + KF EA FE+M + GLV + D + G
Sbjct: 654 VEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNW 713
Query: 371 ALAQKLCN 378
+ +LC+
Sbjct: 714 EITLELCD 721
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 140/274 (51%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +YN ++ ++ V +AE+ MRK V P+ V Y T++ G+C+L V A +L
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EMR++ I P+ + Y +VI G+ ++G+ E M LV P VTYT+L+ GYCK
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG+++ A + M+ +G P+ TY K G+++ A L +M G P+ T
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ LCK ++ +++ +EM G D T T L+ C+M + +A M+
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIML 549
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ L P +TF L + F GM ++L M
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 156/304 (51%), Gaps = 2/304 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I+L LC+ G+V+ A + D+ P V Y ++++G+ R + + E++
Sbjct: 247 IVLHCLCQLGKVREAHNLLVQMT--DRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ + P+ Y ++ C+ V A +L++ MRK G+ P+ +VY TVI G + G
Sbjct: 305 GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVS 364
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + P +VTYTS++ G CK+G + A ++ M+ +G P TY
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ K G++++A +++ +M++ G TP+ +TY L LCK ++D+A ++ EM +G
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ T +++ LC++ ++ E+M G P +T+ L D + K G A A +L
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544
Query: 377 CNVM 380
+M
Sbjct: 545 LRIM 548
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 48/319 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI Y +AG ++ A F N + + K + L D LCK G
Sbjct: 415 PDEV---TYTALIDGYCKAGEMKEA---FSVHNQM-VQKGLTPNVVTYTALADGLCKNGE 467
Query: 88 VKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ A+E H+ RK L P V YN ++NG + N++ + EM P+ +
Sbjct: 468 IDVANELLHEMSRKGLQ----PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGM 201
TY TL++ YC++ + +A L++ M + ++P + +N +++G +G E+ + M
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583
Query: 202 MERFLVCEPG-------------------------------PTMVTYTSLVKGYCKAGDL 230
+E+ ++ P TY L+KG+CKA ++
Sbjct: 584 LEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNM 643
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + K M+ +G+ + TY+ R F K K +A L+ +M + G ++ Y I
Sbjct: 644 KEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIF 703
Query: 291 LKILCKEDKLDLAIQVSKE 309
+ + +E ++ +++ E
Sbjct: 704 VDVNYEEGNWEITLELCDE 722
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 37/299 (12%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C +K A + F + EL W TV NI+L+ + V++A ++M P
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWN-TVSC-NIVLHCLCQLGKVREAHNLLVQMTDRGNFP 275
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VV+YG +V GYCR+ +D+ ++LV E++ +G++P+ +YN +I L
Sbjct: 276 DVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL------------- 322
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
CK G++ A ++L+ M G P Y F K
Sbjct: 323 ----------------------CKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL 360
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G V A L+ +M PD +TY ++ +CK K+ A ++ EM +G + D T
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T LI C+ + EA + M+++GL P+ +T+ L D K G +A +L + MS
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +L+ + +GM+E E+ + K A+ F L+ C + ++A +E
Sbjct: 559 TFNVLMNGFCMSGMLEDGERLIEWM----LEKGIMPNATTFNSLMKQYCIKNNMRATTEI 614
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ D+ P YNIL+ G +++N+K+A EM ++ + TY L+ G+
Sbjct: 615 YKAMH--DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ ++ A +L +EMRK G+ +Y+ +D E G +E + + F+ G
Sbjct: 673 YKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIF 732
Query: 215 VTYTSLVKG 223
V Y G
Sbjct: 733 VVYICFFIG 741
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 175/351 (49%), Gaps = 10/351 (2%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS 73
A L + + G VPD V F +LI ++ G +E A +E + ++
Sbjct: 344 ALQLFDEVVEGGVVPDVV---IFSVLINGCSKVGDMEKA---YELYTRMKLM-GIQPNVF 396
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ LL+ +Q ++ A F + E V YNILL V +A W
Sbjct: 397 IVNSLLEGFHEQNLLEHAYGLFDEAVE---HGITNVVTYNILLKWLGELGKVNEACNLWE 453
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + +TP++V+Y L+ G+C+ +D+A ++K + + G++PNA+ Y +IDG + G
Sbjct: 454 KMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKG 513
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E + E+ + PT T+ +++ G K G + L I +GF+ + TYN
Sbjct: 514 DSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYN 573
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K G V+ A+ YR+M ESG +PD +TY L+ LCK +K+ LA+++ +MK +
Sbjct: 574 SIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYK 633
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
G +D+ + LI C+M+ + AS F +++ GL P+ + + + F
Sbjct: 634 GMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGF 684
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 18/315 (5%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + +L+D K+G + A F + + + APT +N ++NG ++ V + +
Sbjct: 499 AVTYTLLIDGFFKKGDSERAFVVFEQM--MAANIAPTDHTFNTVINGLGKTGRVSETQDK 556
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
K+ +TY ++++G+ + VD A+ +EM + GI P+ I Y ++IDGL +
Sbjct: 557 LNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCK 616
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ + M +V Y++L+ G+CK D+E ASK ++ G P+
Sbjct: 617 SNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVV 676
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN F +E A+NL+++MI++ D Y ++ L KE KL LA+ + EM
Sbjct: 677 YNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEML 736
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK------------- 358
+ D+ T+LI+ L + + AS ++M + P L +
Sbjct: 737 SKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQ 796
Query: 359 ---RLNDEFKKRGMT 370
RL+DE +G+
Sbjct: 797 EAFRLHDEMLDKGLV 811
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 148/307 (48%), Gaps = 3/307 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A+ + IL+ ++C++ + A E + +E W P+ Y ++ + N +A R
Sbjct: 255 AAAYSILVQAVCRRLDLNLACELLKEMREF--GWVPSKGTYTAVIVACVKQGNFVEALRL 312
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM + NV+ +L++GYC L V+ A++L E+ + G+ P+ ++++ +I+G +
Sbjct: 313 KDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSK 372
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G E+ + R + P + SL++G+ + LE A + + G + + T
Sbjct: 373 VGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVT 431
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN ++ + GKV +A NL+ KM+ G TP ++Y+ L+ CK+ +D A + K +
Sbjct: 432 YNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSIL 491
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
RG + T T+LI + + A FE M+ + P TF + + K G +
Sbjct: 492 ERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVS 551
Query: 372 LAQKLCN 378
Q N
Sbjct: 552 ETQDKLN 558
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 23/282 (8%)
Query: 20 DKIGGHEVPDFVSKD-TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----L 74
DK+ FVS T+ +I + + G V++A+ + + +SG S
Sbjct: 555 DKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYR--------EMCESGISPDVIT 606
Query: 75 FEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+ L+D LCK ++ A S+ +K +LD V Y+ L++G+ + +++ A +
Sbjct: 607 YTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD------VVAYSALIDGFCKMHDMESASK 660
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ +TPN V Y +++ G+ L ++ A+ L +EM K + + VY ++I GL+
Sbjct: 661 FFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLL 720
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G+ + L + P +V YT L+ G G LE ASKILK M PS
Sbjct: 721 KEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVL 780
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
YN + G +++A L+ +M++ G PD TY IL+
Sbjct: 781 VYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 41/328 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + + G E A FE M N F +++ L K GRV +
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQM----MAANIAPTDHTFNTVINGLGKTGRVSETQDK 556
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + Q + T YN +++G+F+ V A + EM + ++P+V+TY +L++G
Sbjct: 557 LNNF--IKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGL 614
Query: 155 CRLRRVDRAIRLVKEMRKEGIE-----------------------------------PNA 179
C+ ++ A+ + +M+ +G++ PN
Sbjct: 615 CKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNT 674
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+VYN++I G + E + + + + + YTS++ G K G L A +
Sbjct: 675 VVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSE 734
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+S+ +P Y S G++E+A + ++M + TP L Y+IL+ +E
Sbjct: 735 MLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGN 794
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L A ++ EM +G D T +L++
Sbjct: 795 LQEAFRLHDEMLDKGLVPDDTTYDILVN 822
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 148/370 (40%), Gaps = 71/370 (19%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F+S + +F LL S + ++ A E F R L+ P V + N LL R V D
Sbjct: 146 FESDSRVFNYLLKSFVRVNKITDAVECF--RTMLEHDLVPWVPIMNNLLTAMVRRNMVCD 203
Query: 128 A-----------------------------------ERFWLEMRKENVTPNVVTYGTLVE 152
A E+F+ E + + + Y LV+
Sbjct: 204 ARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQ 263
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
CR ++ A L+KEMR+ G P+ Y VI V+ G F E + + +
Sbjct: 264 AVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPM 323
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++ SL+KGYC GD+ A ++ ++ G +P ++ SK G +E A LY
Sbjct: 324 NVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELY 383
Query: 273 RKMIESGYTP----------------------------------DRLTYHILLKILCKED 298
+M G P + +TY+ILLK L +
Sbjct: 384 TRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELG 443
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K++ A + ++M +G L + LI C+ D+A + + ++ RGL P+ +T+
Sbjct: 444 KVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYT 503
Query: 359 RLNDEFKKRG 368
L D F K+G
Sbjct: 504 LLIDGFFKKG 513
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 8/271 (2%)
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
RV+N LL + R + DA + M + ++ P V L+ R V A +L E
Sbjct: 151 RVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDE 210
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM----VTYTSLVKGYC 225
M + GI + + V+ ++ G+FEEV E+F G + Y+ LV+ C
Sbjct: 211 MVERGIYGDCYTLHVVMRACMKEGKFEEV----EKFFKEAKGRGLEVDAAAYSILVQAVC 266
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ DL A ++LK M G++PS TY K G +A+ L +M+ G + +
Sbjct: 267 RRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVI 326
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
L+K C ++LA+Q+ E+ G D+ ++LI+ ++ ++A + M
Sbjct: 327 VTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRM 386
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
G+ P+ L + F ++ + A L
Sbjct: 387 KLMGIQPNVFIVNSLLEGFHEQNLLEHAYGL 417
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 37/195 (18%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK +++AS++F + LD P VYN +++G+ N++ A E
Sbjct: 642 YSALIDGFCKMHDMESASKFFTEL--LDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQE 699
Query: 135 MRK-----------------------------------ENVTPNVVTYGTLVEGYCRLRR 159
M K +++ P++V Y L+ G +
Sbjct: 700 MIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQ 759
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
++ A +++KEM I P+ +VYN +I G G +E + + L P TY
Sbjct: 760 LENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDI 819
Query: 220 LVKGYCKAGDLEGAS 234
LV G K G S
Sbjct: 820 LVNGKLKVSHTLGGS 834
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+I + +EAA+ + +M+KN ++ ++ L K+G++ A + + +
Sbjct: 680 MISGFIHLNNMEAALNLHQ-----EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSE 734
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
L + P + +Y +L+NG + +++A + EM N+TP+V+ Y L+ G R
Sbjct: 735 M--LSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFRE 792
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ A RL EM +G+ P+ Y+ +++G
Sbjct: 793 GNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ L+K + + + A + + M+ +P N + V DA LY +M
Sbjct: 152 VFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEM 211
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+E G D T H++++ KE K + + KE K RG ++D ++L+ +CR
Sbjct: 212 VERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDL 271
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSR 393
+ A ++M G VP T+ + K+G A +L + M SV M ++ +R
Sbjct: 272 NLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTR 329
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G E ++ V+N ++ V + + L + P + +L+ + + A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
++ M+ RG T + R K GK E+ +++ G D Y IL++
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+C+ L+LA ++ KEM+ G T T +I + F EA ++M+ GL +
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324
Query: 354 YLTFKRLNDEFKKRGMTALAQKL 376
+ + L + G LA +L
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQL 347
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 162/296 (54%), Gaps = 4/296 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++DSLCK RV A ++F KE+++ P V Y L+NG S DA R
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFF---KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 352
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K+ +TPNV+TY L++ + + +V A L +EM + I+P+ + Y+++I+GL
Sbjct: 353 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 412
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E + M + + +V+Y +L+ G+CKA +E K+ + M RG + + TYN
Sbjct: 413 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 472
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F + G V+ A + +M G +PD TY+ILL LC +L+ A+ + ++M+ R
Sbjct: 473 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+D+ T T +I +C+ K +EA + F + +GL P +T+ + +G+
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G A +K ++ P V +YN +++G + K++ DA + E
Sbjct: 838 YGVVVNGLCKRGDTDLAFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I P+ ++ +ID V+ G+
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P++VTY+SL+ G+C L+ A ++ + M+S+ P TYN
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K+ +VE+ M ++R+M + G + +TY+IL++ L + D+A ++ KEM G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T L+ LC+ K ++A FE + R + P T+ + + K G
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 184/402 (45%), Gaps = 15/402 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +AK +FD L +++ +P + T+ ILI + R + A+
Sbjct: 701 LLSAIAKMNKFDVVISLG-EQMQNLGIPH--NHYTYSILINCFCRRSQLPLALAVLGKMM 757
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L N + +SL L+ C R+ A + + P +N L++G F
Sbjct: 758 KLGYEPNIVTLSSL----LNGYCHSKRISEAVALVDQM--FVTGYQPNTVTFNTLIHGLF 811
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+A M + P++VTYG +V G C+ D A L+ +M + +EP +
Sbjct: 812 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 871
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+YNT+IDGL + ++ + + P +VTY+SL+ C G AS++L M
Sbjct: 872 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I R P T++ F K GK+ +A LY +M++ P +TY L+ C D+L
Sbjct: 932 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A Q+ + M + C D+ T LI C+ + +E F +M +RGLV + +T+ L
Sbjct: 992 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051
Query: 361 NDEFKKRGMTALAQKLCNVMSS--VPRSM----ELLDSRCKD 396
+ G +AQ++ M S VP ++ LLD CK+
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 137/270 (50%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+NI++N + V A +M K P+ VT G+LV G+CR RV A+ LV +M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ G +P+ + YN +ID L + R + + P +VTYT+LV G C +
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A+++L MI + P+ TY+ F K GKV +A L+ +M+ PD +TY L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC D++D A Q+ M +GC D+ + LI+ C+ + ++ F +M +RGL
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
V + +T+ L F + G AQ+ + M
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 136/262 (51%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y +++NG + + A +M + + P V+ Y T+++G C+ + +D A+ L
Sbjct: 833 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 892
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
KEM +GI PN + Y+++I L GR+ + S ++ + + P + T+++L+ + K
Sbjct: 893 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ M+ R PS TY+ F ++++A ++ M+ PD +T
Sbjct: 953 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ ++V +EM RG + T +LI L + D A F++M+
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P+ +T+ L D K G
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNG 1094
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 171/350 (48%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +++ + G + A F N ++ K + G ++ ++D LCK
Sbjct: 833 PDLV---TYGVVVNGLCKRGDTDLA---FNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKH 885
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F KE++ + P V Y+ L++ DA R +M + + P+V T
Sbjct: 886 MDDALNLF---KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 942
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A +L EM K I+P+ + Y+++I+G R +E M E +
Sbjct: 943 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 1002
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +L+KG+CK +E ++ + M RG + + TYN + + G +
Sbjct: 1003 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 1062
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A ++++M+ G P+ +TY+ LL LCK KL+ A+ V + ++ + + T ++I
Sbjct: 1063 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 1122
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++ F ++ +G+ P + + + F ++G A L
Sbjct: 1123 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 176/376 (46%), Gaps = 24/376 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K D A L + P+ V+ + + + Y R W+
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR--------WSDASRL 927
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ + + F L+D+ K+G++ A + + + + +S P++ Y+ L+NG+
Sbjct: 928 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGF 985
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +A++ + M ++ P+VVTY TL++G+C+ +RV+ + + +EM + G+ N
Sbjct: 986 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN +I GL +AG + + + + P ++TY +L+ G CK G LE A + +
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ P+ TYN K GKVED +L+ + G PD + Y+ ++ C++
Sbjct: 1106 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 1165
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD-EASAEFEDMIRR---------- 348
+ A + KEMK G + LI R+ D EASAE +R
Sbjct: 1166 KEEADALFKEMKEDGTLPNSGCYNTLIR--ARLRDGDREASAELIKEMRSCGFAGDASTI 1223
Query: 349 GLVPHYLTFKRLNDEF 364
GLV + L RL+ F
Sbjct: 1224 GLVTNMLHDGRLDKSF 1239
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 9/319 (2%)
Query: 47 GMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW 105
G+ ++ W+ DM+K + LLD+ K G+V A E F + + S
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SI 394
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + Y+ L+NG + +A + + M + +VV+Y TL+ G+C+ +RV+ ++
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 454
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L +EM + G+ N + YNT+I G +AG ++ + P + TY L+ G C
Sbjct: 455 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 514
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G+LE A I + M R TY R K GKVE+A +L+ + G PD +
Sbjct: 515 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 574
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRG-----CDIDLDTSTMLIHLLCRMYKFDEASA 340
TY ++ LC + L + +MK G C + T+ L+ +M A +
Sbjct: 575 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 634
Query: 341 EFEDMIRRGLVPHYLTFKR 359
+D I+ G+ L+ R
Sbjct: 635 LLKD-IKSGVCKKALSLLR 652
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 156 RLR--RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
RLR +++ AI L +M K P+ + +N ++ +V+ +++ V + ++ V
Sbjct: 163 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 222
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ T+ ++ +C + A IL M+ G+ P T F + +V DA++L
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+E GY PD + Y+ ++ LCK +++ A KE++ +G ++ T T L++ LC
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +A+ DMI++ + P+ +T+ L D F K G A++L
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 385
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 161/401 (40%), Gaps = 64/401 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ + +AG V+ A EF + +D + ILL LC G ++ A
Sbjct: 470 TYNTLIQGFFQAGDVDKAQ---EFFSQMDFF-GISPDIWTYNILLGGLCDNGELEKALVI 525
Query: 95 FH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F +++E+D + Y ++ G ++ V++A + + + + P++VTY T++
Sbjct: 526 FEDMQKREMDLD----IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 581
Query: 153 GYCR---LRRVDR------------------------AIRLVKEMRKEGIEPN------- 178
G C L V+ + L+K+M G P+
Sbjct: 582 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKS 641
Query: 179 -----------AIVYNTVID--------GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A T D GL E + ++ + + P P+++ ++
Sbjct: 642 GVCKKALSLLRAFSGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSK 700
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ K + + + M + G + TY+ F + ++ A+ + KM++ G
Sbjct: 701 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 760
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
Y P+ +T LL C ++ A+ + +M G + T LIH L K EA
Sbjct: 761 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 820
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A + M+ +G P +T+ + + KRG T LA L N M
Sbjct: 821 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 182/383 (47%), Gaps = 20/383 (5%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ L + E + + L D + ++PD ++ + LIR + G A E +
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTS---LIRGLCKTGKTWKATRVMEILED 173
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
V + + + +L+ CK G + +A + + S +P V YN +L
Sbjct: 174 SGAVPDVIT----YNVLISGYCKTGEIGSALQLLDR-----MSVSPDVVTYNTILRTLCD 224
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S +K+A + P+V+TY L+E C+ V +A++L+ EMR +G +P+ +
Sbjct: 225 SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVT 284
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTYTSLVKGYCKAGDLEGASKIL 237
YN +I+G+ + GR +E RFL P P ++T+ +++ C G A K L
Sbjct: 285 YNVLINGICKEGRLDEAI----RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFL 340
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
MI +G PS T+N + + G + A+++ KM + G TP+ L+Y+ LL LCK+
Sbjct: 341 AEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKD 400
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K++ AI+ M RGC D+ T L+ LC+ K D A + +G P +T+
Sbjct: 401 KKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITY 460
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ D K G T A KL + M
Sbjct: 461 NTVIDGLSKVGKTDDAIKLLDEM 483
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 168/343 (48%), Gaps = 14/343 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFE-FANNLDMVKNFDSGASLFEILLDSLCKQ 85
VPD + T+ +LI Y + G + +A+ + + + D+V + +L +LC
Sbjct: 177 VPDVI---TYNVLISGYCKTGEIGSALQLLDRMSVSPDVVT--------YNTILRTLCDS 225
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G++K A E + ++ + P V Y IL+ + V A + EMR + P+VV
Sbjct: 226 GKLKEAMEVLDR--QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV 283
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ G C+ R+D AIR + M G +PN I +N ++ + GR+ + +
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM 343
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P++VT+ L+ C+ G + A +L+ M G P+ +YN K K+
Sbjct: 344 IRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKM 403
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E A+ M+ G PD +TY+ LL LCK+ K+D+A+++ ++ +GC L T +
Sbjct: 404 ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTV 463
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
I L ++ K D+A ++M +GL P +T+ L + G
Sbjct: 464 IDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG 506
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 166/355 (46%), Gaps = 9/355 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + T+ ILI + V A+ + + K + +L++ +CK+GR
Sbjct: 245 PDVI---TYTILIEATCKESGVGQAMKLLDEMRD----KGCKPDVVTYNVLINGICKEGR 297
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + + P V +NI+L + DAE+F EM ++ +P+VVT+
Sbjct: 298 LDEAIRFLNHMPSY--GCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTF 355
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ CR + RAI ++++M + G PN++ YN ++ L + + E ++ +
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY +L+ CK G ++ A +IL + S+G P TYN SK GK +D
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDD 475
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ L +M G PD +TY L+ L +E K+D AI +++ G + T ++
Sbjct: 476 AIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIML 535
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LC+ + A M+ RG P ++ L + G+ A +L N + S
Sbjct: 536 GLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCS 590
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 151/324 (46%), Gaps = 9/324 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LI + G ++ AI F N++ I+L S+C GR
Sbjct: 280 PDVV---TYNVLINGICKEGRLDEAI---RFLNHMPSY-GCQPNVITHNIILRSMCSTGR 332
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A ++ + + + +P+V +NIL+N R + A +M + TPN ++Y
Sbjct: 333 WMDAEKFLAEM--IRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSY 390
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ C+ ++++RAI + M G P+ + YNT++ L + G+ + ++ +
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +++ G K G + A K+L M +G P TY+ S+ GKV++
Sbjct: 451 KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ + + E G P+ +TY+ ++ LCK + AI M RGC + +LI
Sbjct: 511 AIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIE 570
Query: 328 LLCRMYKFDEASAEFEDMIRRGLV 351
L EA ++ RG+V
Sbjct: 571 GLAYEGLAKEALELLNELCSRGVV 594
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 6/259 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ILI R G++ AI E N S + LL +LCK +++ A EY
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLS----YNPLLHALCKDKKMERAIEY 409
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P + YN LL + V A ++ + +P ++TY T+++G
Sbjct: 410 LDIM--VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
++ + D AI+L+ EM+ +G++P+ I Y+T++ GL G+ +E P
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY S++ G CKA A L M++RG P+ T+Y + G ++A+ L +
Sbjct: 528 ITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNE 587
Query: 275 MIESGYTPDRLTYHILLKI 293
+ G +++KI
Sbjct: 588 LCSRGVVKKSSAEQVVVKI 606
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
LV G EE +E + P ++ TSL++G CK G A+++++++ G +P
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN + K G++ A+ L +M +PD +TY+ +L+ LC KL A++V
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
R C D+ T T+LI C+ +A ++M +G P +T+ L + K G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296
Query: 369 MTALAQKLCNVMSS 382
A + N M S
Sbjct: 297 RLDEAIRFLNHMPS 310
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L+ L + +L+ + ++M CRG D+ T LI LC+ K +A+ E + G
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
VP +T+ L + K G A +L + MS P
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSVSP 210
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 177/361 (49%), Gaps = 9/361 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T I+ + Y R G V A+ E + + N + + ++D C G + A
Sbjct: 220 TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA----YHAVMDCYCGMGWTEDARRI 275
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEG 153
+ + +P V Y +L+ G+ + +++AER EM++ ++ + V YG ++ G
Sbjct: 276 LESLQR--KGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC+ R+D A R+ EMR GI N VYNT+I+GL + GR EEV +++ P
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+Y +L+ GYC+ G + A ++ +MM+ G + TYN + F ++DA+ L+
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M++ G P+ ++ LL L K K + A+ + KE RG ++ T +I+ LC++
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV--PRSMELLD 391
+ EA + M P LT++ L D + K G A L N M + S+E+ +
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573
Query: 392 S 392
S
Sbjct: 574 S 574
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 8/281 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C++G ++ A E R + A T YN LL G+ + DA R W
Sbjct: 397 YNTLIDGYCREGSMRKAFEMC--RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V PN ++ TL++G + + ++A+ L KE G+ N I +NTVI+GL + GR
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E +++R P +TY +L GYCK G L A+ ++ M GF PS +N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 255 FF--RYFSK-FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
F + +K + KV D ++ +M G +P+ +TY L+ CKE L A + EM
Sbjct: 575 FITGHFIAKQWHKVND---IHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
G + ++ + L+ + K DEA+ + ++ ++P
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 171/391 (43%), Gaps = 44/391 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFE------FANNLDMVKNFDSGASLFEILLDS 81
P VS + ++ R R A + + F + ++ ++F A F++LL +
Sbjct: 98 PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
G++ +A F ++ P++R N LLN +S + A + +MR V
Sbjct: 158 HADAGQLSSALNVFDGMGKV--GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVL 215
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+ T + + YCR RV +A+ V+EM G+E N + Y+ V+D G E+ +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK----------------MMIS--- 242
+E P +VTYT LVKGYCK G +E A +++K MMI+
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335
Query: 243 -RGFLPSPT----------------TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
RG + T YN K G++E+ + ++M + G PD+
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y+ L+ C+E + A ++ + M G T L+ C ++ D+A + M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++RG+ P+ ++ L D K G T A L
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNL 486
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 44/336 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L D CK G++ A+ +K + L +AP+V ++N + G F +K E
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHL--GFAPSVEMFNSFITGHFIAKQWHKVNDIHSE 594
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++PN+VTYG L+ G+C+ + A L EM G+ PN + + ++ + G+
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654
Query: 195 FEEVSGMMERFLVCE--------------------------PGPTMVTYTSLVKGYCKAG 228
+E + ++++ + + P V + ++ G CK+G
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A + + + ++ FLP TY+ + G +++A +L M+ +G TP+ +TY+
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYN 774
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK-------------- 334
L+ LCK KL A+ + +++ +G + T LI C+ K
Sbjct: 775 SLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE 834
Query: 335 --FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA + MI + P+Y+T+ L + K G
Sbjct: 835 GYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 870
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N S ++ +++ LCK GR+ A F + ++ + P Y+ L++G S ++
Sbjct: 695 NPHSANVMWNVIIFGLCKSGRIADAKSLFESLR--NKRFLPDNFTYSSLIHGCAASGSID 752
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A M +TPN++TY +L+ G C+ ++ RA+ L +++ +GI PN I YNT+I
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Query: 187 D----------------GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
D +VE G EE ++++ + P +TY +L+ GY K+G++
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNM 872
Query: 231 EGASKILKMMISRGFLPSPTTYNY 254
E SK+ M RG LP+ N+
Sbjct: 873 EEISKLYDEMHIRGLLPTNWIGNW 896
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 39/326 (11%)
Query: 28 PDFVSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
P+ V T+ LI + + G + EA FE NN + + L+ K+G
Sbjct: 602 PNLV---TYGALIAGWCKEGNLHEACNLYFEMVNN-----GMNPNVFICSALMSCFYKEG 653
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V A+ K +D P + I ++ + +V D + N V
Sbjct: 654 KVDEANLVLQKLVNIDM--IPGCSISTIEID---KISHVVDT------IADGNPHSANVM 702
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ ++ G C+ R+ A L + +R + P+ Y+++I G +G +E + + L
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++TY SL+ G CK+G L A + + S+G P+ TYN + K GK
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L +KM+E GY ++ AI++ +M D + T LI
Sbjct: 823 EAFKLKQKMVEEGY-------------------MEEAIKLLDQMIENNVDPNYITYCTLI 863
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVP 352
H + +E S +++M RGL+P
Sbjct: 864 HGYIKSGNMEEISKLYDEMHIRGLLP 889
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%)
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ V++ L++ + AG L A + M G PS + N + G A +Y
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M +G PD T I+ K C++ ++ A++ +EM+ G +++L ++ C M
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++A E + R+GL P+ +T+ L + K G A+++ M
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI A +G ++ A + + + N + + L+ LCK G++ A
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT----YNSLIYGLCKSGKLSRAVNL 792
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA--------ERFWLE--------MRKE 138
F+K + + +P YN L++ + + +A E ++E M +
Sbjct: 793 FNKLQS--KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIEN 850
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
NV PN +TY TL+ GY + ++ +L EM G+ P + N V +
Sbjct: 851 NVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVVVNNWNRK 910
Query: 199 SGMMERFLVC 208
G M+ + C
Sbjct: 911 DGHMKTYSQC 920
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 182/353 (51%), Gaps = 21/353 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +LAK F A LL D++ +P VS + +IRRY RAGM A F
Sbjct: 145 MIDLLAKHHHFPLARHLL-DEMRERSIP--VSSQVILAIIRRYVRAGMSPEASELFR--- 198
Query: 61 NLDMVKNFDSG---ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
++ + +G ++ LL +L K+ A F K + + P V +Y L++
Sbjct: 199 ---RMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSV---FPPDVVLYTTLVH 252
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
W R+ + AE+ + EM++ + PNV TY ++++ R +V RA L+ +M + G P
Sbjct: 253 AWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPP 312
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAG--DLEGA 233
N +N ++ V+AGR E+V + R L C+P ++TY L++ +C G +L+ A
Sbjct: 313 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPD--IITYNFLMETHCGKGQSNLDAA 370
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K+L MI++G +P T+N + G VE A LY +M E P+ +TY++L+K+
Sbjct: 371 MKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKL 430
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
KE +D+ +++ K+M +G + +++T LI C + A A +M+
Sbjct: 431 FNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMV 483
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ++R + +AG E + L D + L+++ C +G+ +
Sbjct: 316 TFNAIMRAHVKAGRSEQVLQVHNQMRQL----GCDPDIITYNFLMETHCGKGQSNLDAAM 371
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K + + P +N +L + NV+ A R + M++ PNVVTY L++ +
Sbjct: 372 KVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLF 431
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
+ + +D +R+ K+M +G+EPN Y +I+ G + + R +V E P
Sbjct: 432 NKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATL-REMVEEKSLKP 490
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
T Y ++ KAG L +++++M RGF+ P+
Sbjct: 491 TKPVYDMVLMLLRKAGQLRKHEELVELMADRGFIKRPS 528
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 177/361 (49%), Gaps = 9/361 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T I+ + Y R G V A+ E + + N + + ++D C G + A
Sbjct: 220 TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVA----YHAVMDCYCGMGWTEDARRI 275
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEG 153
+ + +P V Y +L+ G+ + +++AER EM++ ++ + V YG ++ G
Sbjct: 276 LESLQR--KGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC+ R+D A R+ EMR GI N VYNT+I+GL + GR EEV +++ P
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+Y +L+ GYC+ G + A ++ +MM+ G + TYN + F ++DA+ L+
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M++ G P+ ++ LL L K K + A+ + KE RG ++ T +I+ LC++
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV--PRSMELLD 391
+ EA + M P LT++ L D + K G A L N M + S+E+ +
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573
Query: 392 S 392
S
Sbjct: 574 S 574
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 8/281 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C++G ++ A E R + A T YN LL G+ + DA R W
Sbjct: 397 YNTLIDGYCREGSMRKAFEMC--RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V PN ++ TL++G + + ++A+ L KE G+ N I +NTVI+GL + GR
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E +++R P +TY +L GYCK G L A+ ++ M GF PS +N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 255 FF--RYFSK-FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
F + +K + KV D ++ +M G +P+ +TY L+ CKE L A + EM
Sbjct: 575 FITGHFIAKQWHKVND---IHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
G + ++ + L+ + K DEA+ + ++ ++P
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 171/391 (43%), Gaps = 44/391 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFE------FANNLDMVKNFDSGASLFEILLDS 81
P VS + ++ R R A + + F + ++ ++F A F++LL +
Sbjct: 98 PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
G++ +A F ++ P++R N LLN +S + A + +MR V
Sbjct: 158 HADAGQLSSALNVFDGMGKV--GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVL 215
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+ T + + YCR RV +A+ V+EM G+E N + Y+ V+D G E+ +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK----------------MMIS--- 242
+E P +VTYT LVKGYCK G +E A +++K MMI+
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335
Query: 243 -RGFLPSPT----------------TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
RG + T YN K G++E+ + ++M + G PD+
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y+ L+ C+E + A ++ + M G T L+ C ++ D+A + M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++RG+ P+ ++ L D K G T A L
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNL 486
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 69/358 (19%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD------------------QSW----------- 105
+ L D CK G++ A+ +K + L + W
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMS 596
Query: 106 ----APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+P + Y L+ GW + N+ +A + EM + PNV L+ + + +VD
Sbjct: 597 ARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVD 656
Query: 162 RAIRLVKEMRKEGIEPNA--------------------------IVYNTVIDGLVEAGRF 195
A +++++ + P +++N +I GL ++GR
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRI 716
Query: 196 EEVSGMME-----RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ + E RFL P TY+SL+ G +G ++ A + +M+S G P+
Sbjct: 717 ADAKSLFESLRNKRFL-----PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII 771
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K GK+ A+NL+ K+ G +P+ +TY+ L+ CKE K A ++ ++M
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
G + T ++LI+ LC +EA + MI + P+Y+T+ L + K G
Sbjct: 832 VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 889
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 20/326 (6%)
Query: 28 PDFVSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
P+ V T+ LI + + G + EA FE NN + + L+ K+G
Sbjct: 602 PNLV---TYGALIAGWCKEGNLHEACNLYFEMVNN-----GMNPNVFICSALMSCFYKEG 653
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V A+ K +D P + I ++ + +V D + N V
Sbjct: 654 KVDEANLVLQKLVNIDM--IPGCSISTIEID---KISHVVDT------IADGNPHSANVM 702
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ ++ G C+ R+ A L + +R + P+ Y+++I G +G +E + + L
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++TY SL+ G CK+G L A + + S+G P+ TYN + K GK
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L +KM+E G P +TY IL+ LC + ++ AI++ +M D + T LI
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVP 352
H + +E S +++M RGL+P
Sbjct: 883 HGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 161/351 (45%), Gaps = 34/351 (9%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LLD L K G+ + A + ++ L + A V +N ++NG + + +AE M++
Sbjct: 470 LLDGLFKAGKTEQALNLW--KETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P+ +TY TL +GYC+L ++ A L+ +M G P+ ++N+ I G A ++ +
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
V+ + P +VTY +L+ G+CK G+L A + M++ G P+ +
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTP---------DRLTY-----------------HILL 291
F K GKV++A + +K++ P D++++ ++++
Sbjct: 648 CFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVII 707
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LCK ++ A + + ++ + D T + LIH DEA + + M+ GL
Sbjct: 708 FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLT 767
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
P+ +T+ L K G + A L N + S P + L+D CK+
Sbjct: 768 PNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE----------------------LDQS 104
N S ++ +++ LCK GR+ A F + +D++
Sbjct: 695 NPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEA 754
Query: 105 WA-----------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ P + YN L+ G +S + A + +++ + ++PN +TY TL++
Sbjct: 755 FSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDE 814
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC+ + A +L ++M +EGI+P I Y+ +I GL G EE ++++ + P
Sbjct: 815 YCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPN 874
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+TY +L+ GY K+G++E SK+ M RG LP+ N+
Sbjct: 875 YITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNW 915
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I A + D A+ L + P+ + T+ LI ++G + A+ F
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNII---TYNSLIYGLCKSGKLSRAVNLF---- 793
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + L+D CK+G+ A + K+K +++ PTV Y+IL+ G
Sbjct: 794 NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKL--KQKMVEEGIQPTVITYSILIYGLC 851
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++A + +M + NV PN +TY TL+ GY + ++ +L EM G+ P
Sbjct: 852 TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVC 208
+ N V + G M+ + C
Sbjct: 912 IGNWKRSDPVVVNNWNRKDGHMKTYSQC 939
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%)
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ V++ L++ + AG L A + M G PS + N + G A +Y
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M +G PD T I+ K C++ ++ A++ +EM+ G +++L ++ C M
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++A E + R+GL P+ +T+ L + K G A+++ M
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 168/312 (53%), Gaps = 4/312 (1%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKN 124
+N + + ++DSLC+ G + AA F KE++ + ++ YN L+ G ++
Sbjct: 199 RNVKADVFTYSTIIDSLCRDGCIDAAISLF---KEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
D + +M + PNV+T+ L++ + + ++ A L KEM +GI PN I YN+
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++DG R E + M++ + P +VT+TSL+KGYCK ++ K+ + + RG
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+ + TY+ + F + GK+E A L+++M+ G PD +TY ILL LC KL+ A+
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKAL 435
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ ++++ ++D+ T++I +C+ K ++A F + +G+ P+ +T+ +
Sbjct: 436 EIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 495
Query: 365 KKRGMTALAQKL 376
K+G + A L
Sbjct: 496 CKKGSLSEANIL 507
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I+++ C+ + A K +L + P +N L+NG V +A
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKL--GYEPDTTTFNTLINGLCLESKVSEAVVLVAR 160
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY ++V G C+ A+ L+++M + ++ + Y+T+ID L G
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC 220
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + ++VTY SLV G CKAG ++LK M SR +P+ T+N
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+++A LY++MI G +P+ +TY+ L+ C +++L A + M
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ T T LI C++ + DE F + +RGLV + +T+ L F + G +A+
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400
Query: 375 KLCNVMSS---VPRSME---LLDSRCKD 396
+L M S +P M LLD C +
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDN 428
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 158/301 (52%), Gaps = 2/301 (0%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
++ + F L++ LC + +V A + E P V YN ++NG +S +
Sbjct: 131 YEPDTTTFNTLINGLCLESKVSEAVVLVARMVE--NGCQPNVVTYNSIVNGICKSGDTSL 188
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A +M + NV +V TY T+++ CR +D AI L KEM +GI+ + + YN+++
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL +AG++ + +++ + P ++T+ L+ + K G L+ A+++ K MI++G P
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP 308
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN + ++ +A N+ M+ + +PD +T+ L+K CK ++D +++
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF 368
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+++ RG + T ++L+ C+ K + A F++M+ G++P +T+ L D
Sbjct: 369 RKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDN 428
Query: 368 G 368
G
Sbjct: 429 G 429
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 163/348 (46%), Gaps = 6/348 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I R G ++AAI F+ K S + L+ LCK G+ +
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEME----TKGIKSSLVTYNSLVGGLCKAGKWNDGVQL 262
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P V +N+L++ + + +++A + EM + ++PN +TY +L++GY
Sbjct: 263 L--KDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C R+ A ++ M + P+ + + ++I G + R +E + +
Sbjct: 321 CMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANT 380
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY+ LV+G+C++G LE A ++ + M+S G LP TY GK+E A+ ++
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ +S D + Y I+++ +CK K++ A + + C+G ++ T T++I LC+
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
EA+ M G P+ T+ L + G + KL M S
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 548
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ +CK G A + K E ++ V Y+ +++ R + A + E
Sbjct: 173 YNSIVNGICKSGDTSLALDLLRKMDE--RNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 230
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + ++VTY +LV G C+ + + ++L+K+M I PN I +N +ID V+ G+
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + + P +TY SL+ GYC L A+ +L +M+ P T+
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + K +V++ M L+RK+ + G + +TY IL++ C+ KL++A ++ +EM G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
D+ T +L+ LC K ++A FED+
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 157/329 (47%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA +++ LL D +P+ + TF +LI + + G ++ A ++
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVI---TFNVLIDVFVKEGKLQEANELYKEM- 301
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + L+D C Q R+ A+ + + +P + + L+ G+
Sbjct: 302 ---ITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM--VRNNCSPDIVTFTSLIKGYC 356
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K V + + + ++ K + N VTY LV+G+C+ +++ A L +EM G+ P+ +
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G+ E+ + E + +V YT +++G CK G +E A + +
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY K G + +A L RKM E G P+ TY+ L++ ++ L
Sbjct: 477 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDL 536
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +EMK G D + M+I +L
Sbjct: 537 TASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 135/274 (49%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ ++ +G +K F +M + N+ T ++ +CR + A +
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EP+ +NT+I+GL + E ++ R + P +VTY S+V G CK
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+GD A +L+ M R TY+ + G ++ A++L+++M G +T
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LCK K + +Q+ K+M R ++ T +LI + + K EA+ +++MI
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G+ P+ +T+ L D + + + A + ++M
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM 336
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 35/251 (13%)
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D AI L +EM + P+ + ++ G+ +F V ++ + + T +
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ +C+ A +L ++ G+ P TT+N KV +A+ L +M+E+G
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 281 TP-----------------------------------DRLTYHILLKILCKEDKLDLAIQ 305
P D TY ++ LC++ +D AI
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ KEM+ +G L T L+ LC+ K+++ +DM R ++P+ +TF L D F
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286
Query: 366 KRGMTALAQKL 376
K G A +L
Sbjct: 287 KEGKLQEANEL 297
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN----NLDMVKNFDSGASLFEILLDSL 82
+PD + T+ IL+ G +E A+ FE NLD+V ++ I+++ +
Sbjct: 412 LPDVM---TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV--------MYTIIIEGM 460
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G+V+ A F + P V Y ++++G + ++ +A +M ++ P
Sbjct: 461 CKGGKVEDAWNLFCSLPC--KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEP 518
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
N TY TL+ + R + + +L++EM+ G +A VID L A
Sbjct: 519 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 189/366 (51%), Gaps = 19/366 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K+ +K ++F + W LL + + V ++ + F++LIRR+A A +VE AI +
Sbjct: 146 MVKIFSKMRQFGAVWALLEEMRKDNSV--LITSELFIVLIRRFASARLVEKAIEVLD--- 200
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK A+ F +++ ++P++R + LL GW
Sbjct: 201 --EMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLF---EDMRVRFSPSLRHFTSLLYGW 255
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++MR+ P++V + L+ Y ++ A L+KEM ++G EPNA
Sbjct: 256 CREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNA 315
Query: 180 IVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
Y +I + +E + MER CE +VTYT+L+ G+CK G + +I
Sbjct: 316 NSYTIMIQAFCSQEKMDEAMRVFVEMER-TGCE--ADVVTYTALISGFCKWGKINRGYQI 372
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M +G +P+ TY K ++E+ + L M G PD Y++++++ CK
Sbjct: 373 LDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACK 432
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHY 354
++ +Q+ EM+ +LDT ++IH EA F++MI RGL+ P Y
Sbjct: 433 LGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQY 492
Query: 355 LTFKRL 360
K L
Sbjct: 493 GILKEL 498
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 134 EMRKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EMRK+N V + L+ + R V++AI ++ EM K G EP+ V+ ++D L +
Sbjct: 165 EMRKDNSVLITSELFIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKN 224
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G ++ + + E V P++ +TSL+ G+C+ G
Sbjct: 225 GSVKQAASLFEDMRV-RFSPSLRHFTSLLYGWCREG------------------------ 259
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
K+ +A ++ +M E+G+ PD + ++ LL K+ A + KEM
Sbjct: 260 -----------KLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVR 308
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+GC+ + ++ T++I C K DEA F +M R G +T+ L F K G
Sbjct: 309 KGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINR 368
Query: 373 AQKLCNVM 380
++ + M
Sbjct: 369 GYQILDAM 376
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 168/348 (48%), Gaps = 6/348 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +L+R Y A+ F V N ++ + + L K R + A +
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFL----KLNRTQMAWVLY 204
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ ++ ++ +NI++N + +K A+ F M V PNVVTY T++ G+C
Sbjct: 205 AEMFRMN--IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RA + + M+ +G+EP+ YN+ I GL + GR EE SG++ + L P V
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC GDL+ A MIS+G + S TYN F G++ DA N+ ++M
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
E G PD +T++IL+ C+ A + EM +G L T T LI++L + +
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
EA A F + + GL+P + F L D G A +L M ++
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM 490
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L+D C +G + A Y ++ + + + ++ YN+ ++ F + DA+
Sbjct: 321 AVTYNALIDGYCNKGDLDKA--YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNM 378
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EMR++ + P+ VT+ L+ GYCR RA L+ EM +GI+P + Y ++I L +
Sbjct: 379 IKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGK 438
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
R +E + + P ++ + +L+ G+C G+++ A ++LK M + LP T
Sbjct: 439 RNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEIT 498
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + + + GKVE+A L +M G PD ++Y+ L+ K + A +V EM
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMM 558
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
G D + T LI LC+ + + A ++M+ +G+ P T+
Sbjct: 559 TTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 13/325 (4%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I L K + A L+ + G VP+ V T+ LI Y G ++ A +A
Sbjct: 293 ISGLCKEGRLEEASGLICKMLEGGLVPNAV---TYNALIDGYCNKGDLDKA-----YAYR 344
Query: 62 LDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M+ K + + + + +L +GR+ A + +E + P +NIL+NG+
Sbjct: 345 DEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE--KGMMPDAVTHNILINGYC 402
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + K A EM + + P +VTY +L+ + R+ A L ++++EG+ P+ I
Sbjct: 403 RCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDII 462
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
V+N +IDG G + +++ + P +TY +L++GYC+ G +E A ++L M
Sbjct: 463 VFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM 522
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG P +YN +SK G ++DA + +M+ +G+ P LTY+ L++ LCK +
Sbjct: 523 KRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEG 582
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTML 325
+ A ++ KEM +G I D ST L
Sbjct: 583 EHAEELLKEMVSKG--ITPDDSTYL 605
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 6/270 (2%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ A T ++++L+ + K +A + ++++ PN+ T ++ + +L R
Sbjct: 139 DRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQ 198
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYT 218
A L EM + I + +N +I+ L + G+ + E G ME V P +VTY
Sbjct: 199 MAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGV---KPNVVTYN 255
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G+C G + A I + M +G P TYN F K G++E+A L KM+E
Sbjct: 256 TIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG 315
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY+ L+ C + LD A EM +G L T + IH L + +A
Sbjct: 316 GLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDA 375
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++M +G++P +T L + + + G
Sbjct: 376 DNMIKEMREKGMMPDAVTHNILINGYCRCG 405
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL-DMVKNFDSGA 72
A+ LL + +G P V+ + + ++ + R +A + L D++
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDII------- 462
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERF 131
+F L+D C G + A F KE+D P YN L+ G+ R V++A +
Sbjct: 463 -VFNALIDGHCANGNIDRA---FQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQL 518
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM++ + P+ ++Y TL+ GY + + A R+ EM G +P + YN +I GL +
Sbjct: 519 LDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCK 578
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
E +++ + P TY S+++ DLEG
Sbjct: 579 NQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 153/306 (50%), Gaps = 4/306 (1%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
++ LCK+G++ A E F + +E + AP YNIL+NG + ++ EM+
Sbjct: 98 INGLCKKGQIAEAMEIFREMEE--KGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQAR 155
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+P VVTY TL+ G+C RVD A+ ++ EM GI PN + Y +I GL + G E
Sbjct: 156 GFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERA 215
Query: 199 SGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+++ + E P +VTYT L+ G C+ G E + L MI G P+ TY
Sbjct: 216 ILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALI 275
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ G +A L +M+ G D + Y+ L+ LCK +LD A ++ M +G
Sbjct: 276 HGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVA 335
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+ T T LI LC DEA ++M +G+VP+ +T+ L + F + T A +L
Sbjct: 336 PDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQL 395
Query: 377 CNVMSS 382
N M S
Sbjct: 396 VNEMKS 401
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 4/288 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL++ LCK +++ + + + ++PTV Y L++G+ + V A E
Sbjct: 129 YNILINGLCKDAQLEMGVSLMDEMQA--RGFSPTVVTYTTLIHGFCTAGRVDAAMDILDE 186
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE--PNAIVYNTVIDGLVEA 192
M +TPN VTY L++G C V+RAI ++KEM+ G E PN + Y +I GL +
Sbjct: 187 MEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQK 246
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G FE ++ ++ P TYT+L+ G C+ G A+ +L M++ G Y
Sbjct: 247 GLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIY 306
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N K G+++ A + M+E G PD TY L++ LC LD A+ + +EM+
Sbjct: 307 NSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRA 366
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G + T T LI+ + + D A +M GL+P +K L
Sbjct: 367 KGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 14/284 (4%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
R +L S V Y+ +NG + + +A + EM ++ P+ TY L+ G C+
Sbjct: 80 RPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKD 139
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+++ + L+ EM+ G P + Y T+I G AGR + +++ P VTY
Sbjct: 140 AQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTY 199
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+L++G C G++E A +LK M RG P+ TY + G E M +M
Sbjct: 200 TALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEM 259
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG P+ TY L+ LC++ A + EM GC++D+ LI LC+M +
Sbjct: 260 IISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGEL 319
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
D A M+ +G+ P T+ T+L Q LC+
Sbjct: 320 DFAREMQILMVEKGVAPDVFTY------------TSLIQGLCDA 351
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 128/258 (49%), Gaps = 2/258 (0%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + + + R + + +V++Y + G C+ ++ A+ + +EM ++G P++
Sbjct: 68 RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I+GL + + E +M+ PT+VTYT+L+ G+C AG ++ A IL M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY--TPDRLTYHILLKILCKED 298
RG P+ TY + G+VE A+ + ++M G P+ +TY L+ LC++
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ ++ EM GC + T T LIH LC+ F EA+ +M+ G + +
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307
Query: 359 RLNDEFKKRGMTALAQKL 376
L D K G A+++
Sbjct: 308 SLIDGLCKMGELDFAREM 325
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 8/282 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI + +E + + + F + L+ C GRV AA +
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQ----ARGFSPTVVTYTTLIHGFCTAGRVDAAMDI 183
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM--RKENVTPNVVTYGTLVE 152
+ + + P Y L+ G V+ A EM R PNVVTY L+
Sbjct: 184 LDEMEH--RGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C+ + + + EM G PN Y +I GL + G F E + ++ +
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL 301
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+V Y SL+ G CK G+L+ A ++ +M+ +G P TY + G +++A+ L
Sbjct: 302 DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLM 361
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++M G P+ +TY L+ + D+ D A+Q+ EMK G
Sbjct: 362 QEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNG 403
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 8/262 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + AG V+AA+ + + + N + L+ LC G V+ A
Sbjct: 163 TYTTLIHGFCTAGRVDAAMDILDEMEHRGITPN----TVTYTALIQGLCDCGEVERAILV 218
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K P V Y L++G + + F EM PN TY L+ G
Sbjct: 219 LKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGL 278
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C+ A L+ EM G E + ++YN++IDGL + G + M + L+ E G P
Sbjct: 279 CQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREM--QILMVEKGVAP 336
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ TYTSL++G C AG L+ A +++ M ++G +P+ TY F++ + + A+ L
Sbjct: 337 DVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLV 396
Query: 273 RKMIESGYTPDRLTYHILLKIL 294
+M +G P Y IL K L
Sbjct: 397 NEMKSNGLMPAGDIYKILFKSL 418
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 14/251 (5%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE---PGP 212
R R + ++R+ + + + I Y+ I+GL + G+ E ME F E P
Sbjct: 68 RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEA---MEIFREMEEKGSAP 124
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
TY L+ G CK LE ++ M +RGF P+ TY F G+V+ AM++
Sbjct: 125 DSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDIL 184
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG--CDIDLDTSTMLIHLLC 330
+M G TP+ +TY L++ LC +++ AI V KEMK RG C ++ T T LIH LC
Sbjct: 185 DEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLC 244
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME-- 388
+ F+ ++MI G P+ T+ L ++G A L N M ++ ++
Sbjct: 245 QKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304
Query: 389 ----LLDSRCK 395
L+D CK
Sbjct: 305 IYNSLIDGLCK 315
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 186/352 (52%), Gaps = 11/352 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIKVL+K K+F + W LL + + V ++ + FV+++RR+A + MV AI +
Sbjct: 121 MIKVLSKMKQFGAVWALLEEMRRDNSV--LITSEVFVVVMRRFASSRMVNKAIEVLD--- 175
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK A+ F +++ ++P+++ + LL GW
Sbjct: 176 --EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF---EDMRVRFSPSLKHFTCLLYGW 230
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A+ ++MR+ P++V Y L+ GY ++ A L+KE+R++G +PNA
Sbjct: 231 CKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNA 290
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +I L + +E + +VTYT+LV G+CK ++ +IL+
Sbjct: 291 TSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQS 350
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G +P+ TY + K ++E+ L +M + G PD Y++++++ CK +
Sbjct: 351 MIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKLGE 410
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
++ + EM+ G LDT ++I+ EA F++M+ RGL+
Sbjct: 411 VNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLL 462
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 123/228 (53%), Gaps = 2/228 (0%)
Query: 134 EMRKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EMR++N V + ++ + R V++AI ++ EM K G EP+ V+ ++D L +
Sbjct: 140 EMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKN 199
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G +E + + E V P++ +T L+ G+CK G L A +L M GF P Y
Sbjct: 200 GSVKEAASLFEDMRV-RFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVY 258
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++ GK+ DA +L +++ G P+ +Y IL++ LC ++K+D A++V EM+
Sbjct: 259 NNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMER 318
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
GCD D+ T T L+ C+ D+ + MI++G +P+ LT+ L
Sbjct: 319 SGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHL 366
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 150/308 (48%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LCK G A E F + + P V YN ++NG + A +
Sbjct: 166 FTTLINGLCKVGEFAQAVELFDDM--VAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKK 223
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN+VTY TL++ CR R V+ A+ + M+ +GI P+ Y ++I GL + R
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E S ++ P +VT+ LV +CK G + A +LK M G P+ TY+
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+S + V +A L+ MI G P+ +Y+IL+ CK ++D A+Q+ EM +G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + LIH C++ K EA F +M G +P T+ L D F K+G A
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAF 463
Query: 375 KLCNVMSS 382
+L M S
Sbjct: 464 RLFRAMQS 471
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 171/369 (46%), Gaps = 9/369 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K EF A L D + PD + +T +I + G AA +
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT---IINGLCKIGETAAAAGLLKKME 225
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + L+DSLC+ V A + F K + +P + Y L+ G
Sbjct: 226 EAGCQPNMVT----YSTLIDSLCRDRLVNEALDIFSYMKA--KGISPDIFTYTSLIQGLC 279
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K+A EM N+ P++VT+ LV+ +C+ +V A+ ++K M + G+EPN +
Sbjct: 280 KFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVV 339
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y++++ G E + + P + +Y L+ GYCKA ++ A ++ M
Sbjct: 340 TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM 399
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I +G P+ +YN F + GK+ +A +L+R M +G PD TY ILL CK+ L
Sbjct: 400 IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYL 459
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A ++ + M+ +L T+L+H +C+ +A F ++ +GL PH + +
Sbjct: 460 GKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTI 519
Query: 361 NDEFKKRGM 369
+ K G+
Sbjct: 520 INGLCKEGL 528
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 132/277 (47%), Gaps = 2/277 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+D+ CK+G+V A E+ P V Y+ L+ G+ +V +A + +
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEM--GVEPNVVTYSSLMYGYSLWTDVVEARKLFHV 363
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN+ +Y L+ GYC+ +R+D A++L EM +G+ PN + YNT+I G + G+
Sbjct: 364 MITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK 423
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + P + TY+ L+ G+CK G L A ++ + M S P+ Y
Sbjct: 424 LREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTI 483
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +DA L+ ++ G P Y ++ LCKE LD A++ + M+ G
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
C D + ++I L + A +M RG +
Sbjct: 544 CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 162/360 (45%), Gaps = 13/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L K E +A LL +++ G P+ V T+ LI R +V A+ F +
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQ--PNMV---TYSTLIDSLCRDRLVNEALDIFSY 258
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
K + L+ LCK R K AS ++ L+ P + +N+L++
Sbjct: 259 MK----AKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN--IMPDIVTFNVLVDT 312
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + V +A M + V PNVVTY +L+ GY V A +L M +G +PN
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN +I+G +A R +E + + P V+Y +L+ G+C+ G L A + +
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M + G LP TY+ F K G + A L+R M + P+ + Y IL+ +CK
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
A ++ E+ +G + T +I+ LC+ DEA F +M G P +++
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYN 552
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 151/317 (47%), Gaps = 15/317 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K + A LL + + +PD V TF +L+ + + G V A+ +
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIV---TFNVLVDTFCKEGKVSEALGVLKTMT 330
Query: 61 NLDMVKNFDSGASL---FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ + N + +SL + + D V A + FH + + P + YNIL+N
Sbjct: 331 EMGVEPNVVTYSSLMYGYSLWTD-------VVEARKLFHVM--ITKGCKPNIFSYNILIN 381
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ ++K + +A + + EM + +TPN V+Y TL+ G+C+L ++ A L + M G P
Sbjct: 382 GYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP 441
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ ++DG + G + + P +V YT LV CK+G+ + A K+
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLF 501
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ +G P Y K G +++A+ +R M G PD ++Y+++++ L +
Sbjct: 502 SELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQH 561
Query: 298 DKLDLAIQVSKEMKCRG 314
A+ + EM+ RG
Sbjct: 562 KDESRALLLVGEMRDRG 578
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV-DRAIRLVKEMRKEGIEPNAIV 181
+N+ DA + M P ++ + L+ ++ + D I L K+M G+ PN
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+ ++ + R + ++ + + PT+VT+T+L+ G CK G+ A ++ M+
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
++G P TYN K G+ A L +KM E+G P+ +TY L+ LC++ ++
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + MK +G D+ T T LI LC+ ++ EASA +M ++P +TF L
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310
Query: 362 DEFKKRGMTALAQKLCNVMS 381
D F K G + A + M+
Sbjct: 311 DTFCKEGKVSEALGVLKTMT 330
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M ++PN+ T + +C+L+RVD ++ ++ K G++P + + T+I+GL + G
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG 177
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F + + + + P + TY +++ G CK G+ A+ +LK M G P+ TY+
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ V +A++++ M G +PD TY L++ LCK + A + EM
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D+ T +L+ C+ K EA + M G+ P+ +T+ L + A
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357
Query: 374 QKLCNVM 380
+KL +VM
Sbjct: 358 RKLFHVM 364
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 12/334 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + T+ +LI Y ++G ++ A+ E + V +++ +L SLC G
Sbjct: 174 VPDVI---TYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNT-------ILRSLCDSG 223
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++K A E + ++ + P V Y IL+ V A + EMRK+ P+VVT
Sbjct: 224 KLKEAMEVLDR--QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 281
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G C+ R+D AI+ + M G +PN I +N ++ + GR+ + ++ L
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P++VT+ L+ C+ L A +L+ M G +P+ +YN F + K++
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ M+ G PD +TY+ LL LCK+ K D A+++ ++ +GC L T +I
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
L ++ K + A+ E+M R+GL P +T+ L
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTL 495
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 176/375 (46%), Gaps = 12/375 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ L + E + L I ++PD ++ + LIR + R+G A E N
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTS---LIRGFCRSGKTRKATRIMEILEN 170
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
V + + + +L+ CK G + A + + S AP V YN +L
Sbjct: 171 SGAVPDVIT----YNVLIGGYCKSGEIDKALQVLER-----MSVAPDVVTYNTILRSLCD 221
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S +K+A + P+V+TY L+E C V +A++L+ EMRK+G +P+ +
Sbjct: 222 SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 281
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I+G+ + GR +E + + P ++T+ +++ C G A ++L M+
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+G PS T+N + + + A+++ KM + G P+ L+Y+ LL C+E K+D
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI+ + M RGC D+ T L+ LC+ K D A + +G P +T+ +
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461
Query: 362 DEFKKRGMTALAQKL 376
D K G T A +L
Sbjct: 462 DGLTKVGKTEYAAEL 476
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 161/358 (44%), Gaps = 42/358 (11%)
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N ++ ++F+ AS I L L + G ++ ++ + + Q P V L+ G+
Sbjct: 97 NGVNGSRSFEEFAS--NIHLRKLVRNGELEEGLKFLERM--IYQGDIPDVIACTSLIRGF 152
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
RS + A R + P+V+TY L+ GYC+ +D+A+++++ M + P+
Sbjct: 153 CRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDV 209
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG-------------------------- 211
+ YNT++ L ++G+ +E +++R + C P
Sbjct: 210 VTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDE 269
Query: 212 -------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
P +VTY L+ G CK G L+ A K L M G P+ T+N R G+
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
DA L M+ G +P +T++IL+ LC++ L AI V ++M GC + +
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
L+H C+ K D A E M+ RG P +T+ L K G A ++ N +SS
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSS 447
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 9/300 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LI + G ++ AI +F NN+ + I+L S+C GR
Sbjct: 277 PDVV---TYNVLINGICKEGRLDEAI---KFLNNMPLY-GCQPNVITHNIILRSMCSTGR 329
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A L + +P+V +NIL+N R + + A +M K PN ++Y
Sbjct: 330 WMDAERLLADM--LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSY 387
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G+C+ +++DRAI ++ M G P+ + YNT++ L + G+ + ++ +
Sbjct: 388 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSS 447
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +++ G K G E A+++L+ M +G P TY+ R GKV++
Sbjct: 448 KGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDE 507
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ ++ M P +TY+ ++ LCK + AI M +GC T T+LI
Sbjct: 508 AIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 193/440 (43%), Gaps = 70/440 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI LAKA A +L + + VP V T+ IL+ +AG +E A F
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEV---TYGILVNSLCKAGTLERAEELFRVM- 321
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F + ++ L+ K GR+K A F + E + P V + ++++G
Sbjct: 322 ---AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE--AGYRPDVITHTVMIDGLC 376
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S N + A + + EM + PNVVTY T+++G ++ RV A R++K M G P+++
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK------------------ 222
Y ++DG + GR +E + +++ C P + Y+SLV
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQ 496
Query: 223 ------------------GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF--SKF 262
G CK G L+ A +I + M+S G P TTYN S+
Sbjct: 497 SKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+VE A L + + GY PD +TY L LCK ++D A+++ +E RG + D+
Sbjct: 557 NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAY 616
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF----------KRLN------DEFKK 366
T L LC + D A + F++M+R+G P + K+L DE
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIG 676
Query: 367 RGM-------TALAQKLCNV 379
+G TAL Q LC+
Sbjct: 677 KGQKPTVATYTALVQALCHA 696
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 177/389 (45%), Gaps = 43/389 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L K + + + + + P+ S F ILIR +AR + A+ FE
Sbjct: 125 LMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS---FNILIRSFARTRRADDAVTCFEIMK 181
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K F IL+D LCK G + A E FH+ ++ G+
Sbjct: 182 R----KRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE----------------MMAMGF- 220
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V P+ + +V + +RV A + +M K G P+AI
Sbjct: 221 -------------------VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+IDGL +AG +E +++ L PT VTY LV CKAG LE A ++ ++M
Sbjct: 262 AYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF P+ Y F+K G++++A +L+ +M+E+GY PD +T+ +++ LCK
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A + +EM GC ++ T T +I L ++ + A + MI G P +T+ L
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
D F K G A +L + + S L
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNL 470
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 168/369 (45%), Gaps = 44/369 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD TF+IL+ +AGM E A FE + + + +L ++ +L K R
Sbjct: 187 PDL---HTFLILVDCLCKAGMDEKA---FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
VK A E F + ++ + P YN +++G ++ + ++A + M + P VTY
Sbjct: 241 VKEAREVFGQMEKC--GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
G LV C+ ++RA L + M G PN+++Y ++I G ++GR +E + + +
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++T+T ++ G CK+G+ E A+K + M+ G P+ TY + SK G+V +
Sbjct: 359 AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRG------------ 314
A + + MI G PD +TY LL CK +LD A Q+ E+ KC
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478
Query: 315 --CD---------------------IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CD +D +I LC+ + DEA F+ M+ G
Sbjct: 479 GLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 352 PHYLTFKRL 360
P T+ L
Sbjct: 539 PDATTYNIL 547
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 175/389 (44%), Gaps = 19/389 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L+K +A+ ++ I PD V T++ L+ + + G ++ A + +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSV---TYICLLDGFCKLGRLDEAAQLLDELD 462
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRV-KAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N L+ L++ LC G V K + F + K ++ P + I+ G
Sbjct: 463 KCSSSPNL----QLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIV--GL 516
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR--RVDRAIRLVKEMRKEGIEP 177
++ + +A R + M E P+ TY L+ G CR R RV+RA L+ ++ K G P
Sbjct: 517 CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLP 576
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+A+ Y + GL + G + M+E +V YT+L G C G ++ A +
Sbjct: 577 DAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M+ +G P Y K K+EDA + +MI G P TY L++ LC
Sbjct: 637 QEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHA 696
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTM----LIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+D A + M RG +L S M LIH C+ K D A FEDMI RG VP
Sbjct: 697 GNVDEAFHRFESMLARG---ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPT 753
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+T L D + G T AQ+L M++
Sbjct: 754 AVTSASLFDGLVRSGKTEKAQELLQEMAA 782
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 178/446 (39%), Gaps = 72/446 (16%)
Query: 15 WCLLLDKIGG--------------------HEVPDFVSKDTFVILIRRYARAGMVEAAIW 54
W LLLD+ GG H PDFV + V I + ++ + W
Sbjct: 9 WLLLLDRGGGRAIVRHYTARSFPSGKPEREHLTPDFVRRADLVTSIVETIKDVRLDGSSW 68
Query: 55 TFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNI 114
+ N+ + S +L SL +V + F + + V YN
Sbjct: 69 SVHNIRNVLGPVHGQVLGSHVAAVLRSL----KVTGTAISFFRWAGEQAGFQHDVFTYNC 124
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+N KN EM K + PN ++ L+ + R RR D A+ + M+++
Sbjct: 125 LMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKR 184
Query: 175 IEPNAIVYNTVIDGLVEAGRFE-------------------------------------- 196
+P+ + ++D L +AG E
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244
Query: 197 -EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
EV G ME+ C P + Y +++ G KAG + A K+L M+++ +P+ TY
Sbjct: 245 REVFGQMEK---CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K G +E A L+R M SG+ P+ + Y L+ K ++ A + EM G
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D+ T T++I LC+ F++A+ FE+M+R G P+ +T+ + K G A A +
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421
Query: 376 LCNVM---SSVPRSME---LLDSRCK 395
+ M P S+ LLD CK
Sbjct: 422 IMKGMIAHGCFPDSVTYICLLDGFCK 447
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 5/292 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL--EM 135
++ LCK GR+ A F + + + P YNIL+NG RS+ + F L ++
Sbjct: 512 IIVGLCKTGRLDEACRIFQRM--VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K P+ VTY L G C++ VDRA+++++E G + + Y + GL G+
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + + + P Y ++ G K LE A K MI +G P+ TY
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTAL 689
Query: 256 FRYFSKFGKVEDAMNLYRKMIESG-YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G V++A + + M+ G + Y L+ CK K+D A+++ ++M RG
Sbjct: 690 VQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
TS L L R K ++A ++M G PH TF + D +K
Sbjct: 750 NVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 40/276 (14%)
Query: 72 ASLFEILLDSLCK--QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A+ + IL++ LC+ + RV+ A H +++ + P Y L G + V A
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKV--GYLPDAVTYTPLCIGLCKIGEVDRAV 598
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ E +VV Y L G C +VDRA+ L +EM ++G P+A Y +I+GL
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK--------------------------- 222
++ + E+ + + PT+ TYT+LV+
Sbjct: 659 IKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGS 718
Query: 223 ---------GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
G+CKA ++ A K+ + MISRG +P+ T F + GK E A L +
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
+M G P T+ +L L K D+ +++ +E
Sbjct: 779 EMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 54/280 (19%)
Query: 1 MIKVLAKAKE--FDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF 56
+I L +++E + A+ LL L+K+G +PD V T+ L + G V+ A+
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEKVG--YLPDAV---TYTPLCIGLCKIGEVDRAVKML 601
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E A++ + +++ + L LC QG+V A F + + Q AP Y ++
Sbjct: 602 EEASS----RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM--VRQGGAPDAAAYCCII 655
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE------------------------ 152
NG + K ++DA +F+ EM + P V TY LV+
Sbjct: 656 NGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGEL 715
Query: 153 ------------GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
G+C+ +VD A++L ++M G P A+ ++ DGLV +G+ E+
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+++ P T+T+++ G K+ + + K+LK++
Sbjct: 776 LLQEMAAGGSPPHAATFTAILDGLRKSDE---SGKLLKLV 812
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 161/310 (51%), Gaps = 7/310 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A +++ L+ +L K GRV + + P V +N ++G + + +A +
Sbjct: 270 AIVYQTLIHALSKVGRVNEVLKLLEEMLL--MGCIPDVNTFNDAIHGLCKMLRIHEAAKL 327
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M TPN TYG L+ G CR+ +VD A L+ ++ PN +++NT+I+G V
Sbjct: 328 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVS 383
Query: 192 AGRFEEVSGMM-ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
GR +E +M E L GP + TY +L+ G CK G L A +++ M +G P+
Sbjct: 384 RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVI 443
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY F K G++E+A N+ +M G + + Y+ L+ LCK++K+ A+ + +M
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 503
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+GC D+ T LI LC++ KF+EA ++DM+ G++ + +T+ L F +RG
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563
Query: 371 ALAQKLCNVM 380
A KL N M
Sbjct: 564 QEALKLVNDM 573
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 162/341 (47%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + +T LI + G + +A E N + +K + + IL+D CK+GR
Sbjct: 405 PDIFTYNT---LILGLCKKGYLVSA---RELMNEMQ-IKGCEPNVITYTILIDRFCKEGR 457
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + + A YN L++ + + V+DA + +M + P++ T+
Sbjct: 458 LEEARNVLDEMS--GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 515
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ G C++ + + A+ L ++M EG+ N I YNT+I + G +E ++ L
Sbjct: 516 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+TY L+K C+AG++E + + M+S+G P+ + N + G ++
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 635
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ R MI G TPD +TY+ L+ LCK + A+ + +++ G D T LI
Sbjct: 636 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ FD+A + G +P+ +T+ L F K G
Sbjct: 696 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 9/342 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +L+ R G V+ A N ++V LF L++ +GR+ A
Sbjct: 342 TYGVLMHGLCRMGKVDEARMLLNKVPNPNVV--------LFNTLINGYVSRGRLDEAKAV 393
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H+ L P + YN L+ G + + A EM+ + PNV+TY L++ +
Sbjct: 394 MHESM-LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 452
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R++ A ++ EM +G+ NA+ YN +I L + + ++ M P +
Sbjct: 453 CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 512
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T+ SL+ G CK E A + + M+ G + + TYN F + G +++A+ L
Sbjct: 513 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 572
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G D +TY+ L+K LC+ ++ + + ++M +G + + + +LI+ LCR
Sbjct: 573 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 632
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A DMI RGL P +T+ L + K G A L
Sbjct: 633 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 674
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK+G + +A E ++ + + P V Y IL++ + + +++A E
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQI--KGCEPNVITYTILIDRFCKEGRLEEARNVLDE 467
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + N V Y L+ C+ +V A+ + +M +G +P+ +N++I GL + +
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
FEE G+ + L+ +TY +L+ + + G ++ A K++ M+ RG TYN
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + G +E + L+ M+ G P+ ++ +IL+ LC+ + A++ ++M RG
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+ T LI+ LC+ + EA F+ + G+ P +T+ L K GM
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 702
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 170/404 (42%), Gaps = 49/404 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L E DSA LL D VP+ + T + + + R V +
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG 300
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V F+ + LCK R+ A++ + L + + P Y +L++G
Sbjct: 301 CIPDVNTFNDA-------IHGLCKMLRIHEAAKLVDRM--LLRGFTPNSFTYGVLMHGLC 351
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE-MRKEGIEPNA 179
R V +A ++ PNVV + TL+ GY R+D A ++ E M G P+
Sbjct: 352 RMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDI 407
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YNT+I GL + G +M + P ++TYT L+ +CK G LE A +L
Sbjct: 408 FTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDE 467
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK--- 296
M +G + YN K KV+DA+N++ M G PD T++ L+ LCK
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527
Query: 297 -EDKLDL-------------------------------AIQVSKEMKCRGCDIDLDTSTM 324
E+ L L A+++ +M RGC +D T
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI LCR ++ A FEDM+ +GL P+ ++ L + + G
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 631
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 149/320 (46%), Gaps = 33/320 (10%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
SLF +++ + G A+ + + S PT R YN++L+ K +
Sbjct: 165 SLFILIMKHYGRAGLPGQATRLLLDMRGV-YSCEPTFRSYNVVLDVLLAGNCPKVVPNVF 223
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + ++P V T+G +++ C + VD A L+K+M + G PNAIVY T+I L +
Sbjct: 224 YEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKV 283
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR EV ++E L+ P + T+ + G CK + A+K++ M+ RGF P+ TY
Sbjct: 284 GRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTY 343
Query: 253 NYFFRYFSKFGKVEDAMNLYRK--------------------------------MIESGY 280
+ GKV++A L K M+ G
Sbjct: 344 GVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGC 403
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD TY+ L+ LCK+ L A ++ EM+ +GC+ ++ T T+LI C+ + +EA
Sbjct: 404 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 463
Query: 341 EFEDMIRRGLVPHYLTFKRL 360
++M +GL + + + L
Sbjct: 464 VLDEMSGKGLALNAVGYNCL 483
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 9/266 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K ++ A + D PD TF LI + E A+ ++
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIF---TFNSLIFGLCKVNKFEEALGLYQDML 539
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ N + +L L Q +K ++ + LD YN L+
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI------TYNGLIKALC 593
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N++ + +M + + PN ++ L+ G CR + A+ +++M G+ P+ +
Sbjct: 594 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 653
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN++I+GL + GR +E + ++ V P +TY +L+ +CK G + A +L
Sbjct: 654 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 713
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ GF+P+ T+ F K G E
Sbjct: 714 VDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 181/376 (48%), Gaps = 10/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L K+ F+ AW + + G ++ + +F I+I+ G ++ FE
Sbjct: 123 LLILLIKSNFFEKAWRVFNETKGNVKLDVY----SFGIMIKGCCEVGYLDKG---FEVLG 175
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + ++ L+D CK G ++ + F+K ELD Y +L+NG+F
Sbjct: 176 QMEEM-GLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELD--VVANQYTYTVLINGFF 232
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ KD + +M+ + PNV TY +++ C +++ A L EMR+ G+ N +
Sbjct: 233 KMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVV 292
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+I GL + R E +M R P +++Y +L+ GYC G+L+ AS + M
Sbjct: 293 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 352
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G PS TYN FS+ ++ R+M G +P ++TY IL+ L + D +
Sbjct: 353 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNI 412
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A Q+ M+ G D+ +LIH LC + EAS F+ + L P+ + + +
Sbjct: 413 EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 472
Query: 361 NDEFKKRGMTALAQKL 376
+ K G + A +L
Sbjct: 473 IYGYCKEGSSYRALRL 488
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 154/318 (48%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + + G+ + I +E +V N + + ++ C G++ A E
Sbjct: 223 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYT----YNSMICRCCNDGKLNNAFEL 278
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + A V YN L+ G + + V +AER M+++ ++PN+++Y TL++GY
Sbjct: 279 FDEMRE--RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGY 336
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + +D+A L +M+ G P+ YN +I G EA V+ M+ P+
Sbjct: 337 CSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSK 396
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT L+ ++ ++E A +I M G + Y G +++A L++
Sbjct: 397 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 456
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ E P+ + Y+ ++ CKE A+++ KEM G ++ + I +LC+ K
Sbjct: 457 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEK 516
Query: 335 FDEASAEFEDMIRRGLVP 352
+ EA +DMI GL P
Sbjct: 517 WTEAEVLLKDMIELGLKP 534
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G + AS F++ K QS P++ YNIL+ G+ +KN E
Sbjct: 329 YNTLIDGYCSIGNLDKASSLFNQMKSSGQS--PSLATYNILIAGFSEAKNSAGVTDMVRE 386
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++P+ VTY L++ R +++A ++ M K G+ + +Y +I GL G
Sbjct: 387 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 446
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E S + + P V Y +++ GYCK G A ++LK M G +P+ +YN
Sbjct: 447 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K K +A L + MIE G P ++++ K
Sbjct: 507 TIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISK 544
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 8/299 (2%)
Query: 95 FHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
FH+ + PT V ++ ++N RS+ + A + +M + P T+ L+
Sbjct: 67 FHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLIL 126
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEP 210
+ ++A R+ E K ++ + + +I G E G + EV G ME +
Sbjct: 127 LIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGL--- 182
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +V YT+L+ G CK GD+E ++ M + + TY F K G +D +
Sbjct: 183 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 242
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
LY KM +G P+ TY+ ++ C + KL+ A ++ EM+ RG ++ T LI LC
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 302
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ + EA M R GL P+ +++ L D + G A L N M S +S L
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSL 361
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 180/364 (49%), Gaps = 18/364 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
+++ L KA+ A+ + D++ G + T+ LI + +AG +E A
Sbjct: 75 LLRTLVKARRHHQAYQIFRDELLGQHCD--TNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E ++ D+V + ++ +LC G + A +YF + E AP ++NIL+
Sbjct: 133 ERGHSPDVVTHSS--------IVQALCNTGNLSRAMQYFRESVE----CAPDSVLFNILV 180
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G ++ + +A + EM + + P+VVTY +L++G C+ R++ A +L++ M K +
Sbjct: 181 HGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVR 240
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + YNT+I G + G ++ER + P +VT+ SL+ G+C+ ++ A ++
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L +M P+ TYN G+ +A L +M G PD +TY+ L+ I C+
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCR 360
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+++ A Q+ M RG D + L L + +FDEA A ++M G +P+ T
Sbjct: 361 NFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFT 420
Query: 357 FKRL 360
F L
Sbjct: 421 FNSL 424
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 182/386 (47%), Gaps = 19/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I KA + + A+ LL + K GH PD V+ + +++ G + A+ F
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHS-PDVVTHSS---IVQALCNTGNLSRAMQYFR-- 164
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+++ + + LF IL+ LCK ++ A + + E + P V YN L++G
Sbjct: 165 ESVECAPD----SVLFNILVHGLCKANQLSEARQMIEEMSE--RGIVPDVVTYNSLIDGL 218
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S +++A + M K V PN+VTY TL+ GYC+ A +L++ M + G P+
Sbjct: 219 CKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV 278
Query: 180 IVYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+ +N++I G + + + EV +M++ L P +VTY L+ G C AG A ++
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLC---APNLVTYNVLISGLCDAGRANEACEL 335
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M RG LP TYN F + ++E A + M+E G PD ++Y L L K
Sbjct: 336 LSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLK 395
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
++ D A + M G +L T L+ LC + DEA M R G P T
Sbjct: 396 SERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAAST 455
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
++ L K G A+++ +M S
Sbjct: 456 YEVLVTGLCKAGRVDDAKEVLVMMVS 481
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 158/304 (51%), Gaps = 5/304 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMR 136
LL +L K R A + F R EL T + YN L+ G+ ++ +++ A + EM+
Sbjct: 75 LLRTLVKARRHHQAYQIF--RDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ +P+VVT+ ++V+ C + RA++ +E + P+++++N ++ GL +A +
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLS 190
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E M+E P +VTY SL+ G CK+ +E A ++L+ M+ R P+ TYN
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLI 250
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ K G A L +MI+SG PD +T++ L+ C++ K+D A +V MK C
Sbjct: 251 YGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCA 310
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+L T +LI LC + +EA +M RG++P +T+ L F + A ++
Sbjct: 311 PNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQI 370
Query: 377 CNVM 380
N+M
Sbjct: 371 QNLM 374
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 15/328 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V F IL+ +A + A E + +V + + + L+D LCK R
Sbjct: 171 PDSV---LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVT----YNSLIDGLCKSYR 223
Query: 88 VKAASEYFH---KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
++ A + KRK P + YN L+ G+ ++ A + M + P+V
Sbjct: 224 MEEARQLLETMVKRK-----VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV 278
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
VT+ +L+ G+C+ ++D+A ++ M+K PN + YN +I GL +AGR E ++
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
P ++TY SL+ +C+ +E A +I +M+ RG +P +Y K +
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSER 398
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
++A L M ++G P+ T++ L++ LC +LD A + M+ GCD T +
Sbjct: 399 FDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEV 458
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L+ LC+ + D+A M+ G+ P
Sbjct: 459 LVTGLCKAGRVDDAKEVLVMMVSEGIQP 486
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 17/309 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+ + A LL + P+ V+ +T LI Y + G A E
Sbjct: 214 LIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT---LIYGYCKTGCTGLAHQLIE--- 267
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ SG F L+ C++ ++ A E H K+ AP + YN+L+
Sbjct: 268 -----RMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK--GLCAPNLVTYNVLI 320
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G + +A EM + P+++TY +L+ +CR ++++A ++ M + G+
Sbjct: 321 SGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI 380
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ I Y T+ L+++ RF+E +++ P + T+ SL++G C + L+ A +
Sbjct: 381 PDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHL 440
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L +M G P+ +TY K G+V+DA + M+ G P + ++ L +
Sbjct: 441 LAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAR 500
Query: 297 EDKLDLAIQ 305
E K DLA+
Sbjct: 501 EGKQDLALH 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 17/275 (6%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
G H PD V TF LI + + ++ A N + + +L+ L
Sbjct: 273 GTH--PDVV---TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVT----YNVLISGL 323
Query: 83 CKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
C GR A E E+D + P + YN L+ + R+ ++ A + M + V
Sbjct: 324 CDAGRANEACELL---SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI 380
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+ ++Y TL + R D A L+ M G PN +N++++GL + R +E +
Sbjct: 381 PDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHL 440
Query: 202 ME--RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ R + C+P + TY LV G CKAG ++ A ++L MM+S G P ++
Sbjct: 441 LAVMRRVGCDPAAS--TYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTL 498
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++ GK + A++ + +++ + +Y LL+ +
Sbjct: 499 AREGKQDLALHYFDQVVAAESKACDPSYQKLLEFV 533
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 188/388 (48%), Gaps = 17/388 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ ++ K K+ D LL + G V + T +RR+A A E + F+
Sbjct: 91 MVDIMGKMKQMDQMEFLLEEMEKGQHV----TLKTVGKAMRRFAGARQWENVLRVFDKLG 146
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ KN +S +LLD+LCK+ +V+ A E F +L +P +NI ++GW
Sbjct: 147 TFGLEKNTES----MNLLLDTLCKERKVELAREIF---LDLKSHISPNANTFNIFIHGWC 199
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ V++A EM+ TP V++Y T+V+ YC + L+ EM +G+ PN +
Sbjct: 200 KVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLDEMEAQGLIPNVV 259
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM- 239
Y +V+ L ++ +EE + +R P + Y SL+ KAG E A ++ ++
Sbjct: 260 TYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQVFEVE 319
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT--PDRLTYHILLKILCKE 297
M + G P+ +TYN + A+NL ++ IE+ PD TY+ LLK K
Sbjct: 320 MPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKE-IEASIICKPDVQTYYPLLKSCFKA 378
Query: 298 DKLD-LAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+D L Q+ +M K +D T+L+H LCR K + A FE+MI + + P Y
Sbjct: 379 GSIDSLLSQLLDDMVKKHHLSLDFSAYTLLVHGLCRANKCEWAYCLFEEMIGKDMTPKYQ 438
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
T + L DE K + M AQK+ VM +
Sbjct: 439 TCRLLLDEVKLKHMYDAAQKIEIVMQKI 466
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 40/252 (15%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKE-------------------------------- 173
Y T+V+ +++++D+ L++EM K
Sbjct: 87 AYDTMVDIMGKMKQMDQMEFLLEEMEKGQHVTLKTVGKAMRRFAGARQWENVLRVFDKLG 146
Query: 174 --GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP--GPTMVTYTSLVKGYCKAGD 229
G+E N N ++D L + + E E FL + P T+ + G+CK
Sbjct: 147 TFGLEKNTESMNLLLDTLCKERKVELAR---EIFLDLKSHISPNANTFNIFIHGWCKVNR 203
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+E A ++ M G P +Y+ +++ L +M G P+ +TY
Sbjct: 204 VEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTS 263
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE-DMIRR 348
++ L K ++ + A+Q+++ MK GC D LIH L + + +EA FE +M
Sbjct: 264 VMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQVFEVEMPNT 323
Query: 349 GLVPHYLTFKRL 360
G+ P+ T+ +
Sbjct: 324 GVPPNTSTYNSM 335
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 181/357 (50%), Gaps = 8/357 (2%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
VL +A+ F W LL + VPD V+ T ++++ R A+ V + +F + +
Sbjct: 113 VLGRARRFAHMWDLL--RSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRML 170
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ D LF LL +LC++ + A +H L + + +NILL+GW K
Sbjct: 171 RGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHA---LKYEFKVNRQTFNILLSGW---K 224
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +DAE F EMR+ V P++VTY +L++ +C+ R V+ A +L+ EMR++ I P+ I Y
Sbjct: 225 SAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYT 284
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL G+ ++ +++ P + Y + ++ + A L A +++ M S+
Sbjct: 285 SLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASK 344
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P+ TTYN FFR + + A LY +M G P+ + ++++ + ++ A
Sbjct: 345 GLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQA 404
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ +M G S +L LLC K DEA F MI G P + F+R+
Sbjct: 405 LELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRI 461
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 181/357 (50%), Gaps = 8/357 (2%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
VL +A+ F W LL + VPD V+ T ++++ R A+ V + +F + +
Sbjct: 119 VLGRARRFAHMWDLL--RSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRML 176
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ D LF LL +LC++ + A +H L + + +NILL+GW K
Sbjct: 177 RGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHA---LKYEFKVNRQTFNILLSGW---K 230
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +DAE F EMR+ V P++VTY +L++ +C+ R V+ A +L+ EMR++ I P+ I Y
Sbjct: 231 SAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYT 290
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL G+ ++ +++ P + Y + ++ + A L A +++ M S+
Sbjct: 291 SLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASK 350
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P+ TTYN FFR + + A LY +M G P+ + ++++ + ++ A
Sbjct: 351 GLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQA 410
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ +M G S +L LLC K DEA F MI G P + F+R+
Sbjct: 411 LELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRI 467
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 168/324 (51%), Gaps = 9/324 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + T+ LI + G + A F + + ++KN + G ++ IL+++LCK+G
Sbjct: 183 PDAI---TYTTLIYGFCLLGQLMGA---FSLLDEM-ILKNINPGVYIYNILINALCKEGN 235
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
VK A + + P V Y+ L++G+ V++A++ + M + V PNV +Y
Sbjct: 236 VKEAKNLLAVMTK--EGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSY 293
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ G C+ +RVD A+ L++EM + + P+ + YN++IDGL ++GR +M
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 353
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+VTYTSL+ CK +L+ A+ + M RG P+ TY K G++++
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKN 413
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L++ ++ G D TY +++ LCKE D A+ + +M+ GC + T ++I
Sbjct: 414 AQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 473
Query: 328 LLCRMYKFDEASAEFEDMIRRGLV 351
L + D+A +MI +GL+
Sbjct: 474 SLFEKDENDKAEKLLHEMIAKGLL 497
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 161/325 (49%), Gaps = 4/325 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L+ C G++ A + + ++ P V +YNIL+N + NVK+A+
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEM--ILKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M KE + P VVTY TL++GYC + V A ++ M + G+ PN YN +I+GL +
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
R +E ++ L P VTY SL+ G CK+G + A ++ M RG T
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K ++ A L+ KM E G P TY L+ LCK +L A ++ + +
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+GC ID+ T T++I LC+ FDEA A M G +P+ +TF+ + ++
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 482
Query: 372 LAQKLCNVMSSVPRSMELLDSRCKD 396
A+KL + M + + + +LD + D
Sbjct: 483 KAEKLLHEM--IAKGLLVLDFKVAD 505
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 157/334 (47%), Gaps = 37/334 (11%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ LC +G VK S +FH K + Q + Y LLNG + + A + +
Sbjct: 86 LMKGLCLKGEVKK-SLHFHD-KVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIED 143
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ PNVV Y T+++G C+ + V+ A L EM GI P+AI Y T+I G G+
Sbjct: 144 RSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMG 203
Query: 198 VSGMMERFL-----------------VCEPG------------------PTMVTYTSLVK 222
+++ + +C+ G P +VTY++L+
Sbjct: 204 AFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMD 263
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
GYC G+++ A +I M+ G P+ +YN K +V++AMNL R+M+ P
Sbjct: 264 GYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP 323
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +TY+ L+ LCK ++ A+ + EM RG D+ T T L+ LC+ D+A+A F
Sbjct: 324 DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF 383
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
M RG+ P T+ L D K G AQ+L
Sbjct: 384 MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 417
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 152/338 (44%), Gaps = 8/338 (2%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + IL++ C G++ A + K L + P N L+ G
Sbjct: 38 VKGIRANFVTLNILINCFCHLGQM--AFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 95
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
VK + F ++ + + V+YGTL+ G C++ A++L++ + PN ++YNT
Sbjct: 96 VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+IDGL + E + P +TYT+L+ G+C G L GA +L MI +
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P YN K G V++A NL M + G P +TY L+ C ++ A
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAK 275
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
Q+ M G + ++ + ++I+ LC+ + DEA +M+ + +VP +T+ L D
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335
Query: 365 KKRGMTALAQKLCNVM------SSVPRSMELLDSRCKD 396
K G A L N M + V LLD+ CK+
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 123/275 (44%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + +N +L + K A +M + + N VT L+ +C L ++ +
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G +P+ I NT++ GL G ++ ++ + V+Y +L+ G C
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+ A K+L+M+ R P+ YN K V +A +LY +M G PD +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ C +L A + EM + + + +LI+ LC+ EA M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ G+ P +T+ L D + G A+++ + M
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%)
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
TP ++ + ++ ++++ AI L K+M +GI N + N +I+ G+
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ + L P +T +L+KG C G+++ + ++++GF +Y
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G+ A+ L R + + P+ + Y+ ++ LCK+ ++ A + EM RG D
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T T LI+ C + + A + ++MI + + P + L + K G A+ L VM
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 381 S 381
+
Sbjct: 247 T 247
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 189/370 (51%), Gaps = 12/370 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L AK ++ L + + + +P+ V TF +L+R + R GMVE AI E +
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEV---TFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +L I+++++CKQGRV A ++ + S P Y +L G
Sbjct: 313 GHGCAAN----TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS--PDTISYTTVLKGLC 366
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R++ +DA+ EM ++N PN VT+ T + C+ +++A L+++M + G E N +
Sbjct: 367 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV 426
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +++G GR V +E F P +TYT+L+ G C A L+ A+++L M
Sbjct: 427 TYNALVNGFCVQGR---VDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEM 483
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ + P+ T+N +F + G +++A+ L +M+E G TP+ +TY+ LL + K+
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 543
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+++ + G D+ T + +I +L R + +EA F + G+ P + + ++
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Query: 361 NDEFKKRGMT 370
KR T
Sbjct: 604 LLALCKRCNT 613
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 162/352 (46%), Gaps = 15/352 (4%)
Query: 39 LIRRYARAGMVEAA---IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
L+ Y R G ++AA I + A + A + ++ LC +GRV A
Sbjct: 119 LVAGYCRYGQLDAARRLIASMPVAPD----------AYTYTPIIRGLCDRGRVGEALSLL 168
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
L + P+V Y +LL +S A EMR + TPN+VTY ++ G C
Sbjct: 169 DDM--LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R RVD A + + G +P+ + Y TV+ GL A R+E+V + + P V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+ LV+ +C+ G +E A ++L+ M G + T N K G+V+DA M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G +PD ++Y +LK LC+ ++ + A ++ KEM + C + T I +LC+
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSM 387
++A+ E M G + +T+ L + F +G A +L M P ++
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 152/324 (46%), Gaps = 34/324 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ +C++GRV A E+ ++ + P Y +L G +K +D E + E
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 275
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++N PN VT+ LV +CR V+RAI+++++M G N + N VI+ + + GR
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + P ++YT+++KG C+A E A ++LK M+ + P+ T+N
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESG----------------------------YT----P 282
F + G +E A L +M E G Y+ P
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 455
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY LL LC ++LD A ++ EM + C ++ T +L+ C+ DEA
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKK 366
E M+ G P+ +T+ L D K
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITK 539
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 12/314 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A+ ++ A LL + + + P+ V+ +TF+ ++ + G++E A E +
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL---CQKGLIEQATMLIEQMS 417
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + L++ C QGRV +A E F+ P Y LL G
Sbjct: 418 EHGCEVNIVT----YNALVNGFCVQGRVDSALELFYS-----MPCKPNTITYTTLLTGLC 468
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + A EM +++ PNVVT+ LV +C+ +D AI LV++M + G PN I
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++DG+ + EE ++ + P +VTY+S++ + +E A K+ ++
Sbjct: 529 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P YN K + A++ + M+ +G P+ LTY L++ L ED L
Sbjct: 589 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFL 648
Query: 301 DLAIQVSKEMKCRG 314
+ +E+ RG
Sbjct: 649 KETRDLLRELCSRG 662
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 124/277 (44%), Gaps = 3/277 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V + L+ R DA R + +V Y TLV GYCR ++D A R
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ M + P+A Y +I GL + GR E +++ L P++VTYT L++ C
Sbjct: 135 LIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K+ A ++L M ++G P+ TYN + G+V+DA ++ G+ PD +
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y +LK LC + + ++ EM + C + T ML+ CR + A E M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G + + + K+G A + N M S
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 20/355 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I + K D A+ L+ +G + PD +S T + G+ A W E A
Sbjct: 326 VINTICKQGRVDDAF-QFLNNMGSYGCSPDTISYTTVL--------KGLCRAERW--EDA 374
Query: 60 NNL--DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
L +MV KN F + LC++G ++ A+ + E + YN L+
Sbjct: 375 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE--HGCEVNIVTYNALV 432
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+ V A + M PN +TY TL+ G C R+D A L+ EM ++
Sbjct: 433 NGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 489
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + +N ++ + G +E ++E+ + P ++TY +L+ G K + E A ++
Sbjct: 490 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALEL 549
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L ++S G P TY+ S+ +VE+A+ ++ + + G P + Y+ +L LCK
Sbjct: 550 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 609
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D AI M GC + T LI L E ++ RG++
Sbjct: 610 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
D L EA R +++R P + T L++ C+ G A+++L+ G
Sbjct: 57 DDLAEAAR------LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTA 110
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAIQ 305
YN + ++G+++ A R++I S PD TY +++ LC ++ A+
Sbjct: 111 VDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ +M RGC + T T+L+ +C+ F +A ++M +G P+ +T+ + +
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 366 KRGMTALAQKLCNVMSS 382
+ G A++ N +SS
Sbjct: 227 REGRVDDAREFLNRLSS 243
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 175/373 (46%), Gaps = 11/373 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K FD+ W + D + P+ V T+ LI R G A F+ +M
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVV---TYGTLIDGCCRQGDFLKAFRLFD-----EM 219
Query: 65 V-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K ++ IL+ LC + R+ A F R + P + YN +++G+ +
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMF--RTMRNSGMLPNLYTYNTMMDGYCKIA 277
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+VK A + EM + + PNVVT+G L++G C+ + A + + +M G+ PN VYN
Sbjct: 278 HVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYN 337
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+IDG +AG E + E P + TY+ L+KG C +E A +L+ M +
Sbjct: 338 CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
GFLP+ TYN + K G +E A+ + +M E G P+ +T+ L+ CK K++ A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ + EM +G D+ T LI + EA ++M GL P+ T L D
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Query: 364 FKKRGMTALAQKL 376
K G + A KL
Sbjct: 518 LCKDGRISDAIKL 530
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 184/394 (46%), Gaps = 27/394 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE----------VPDFVSK--------DTFVILIRR 42
+I VL AK + A CL+ D I + V + +S+ + F +LI
Sbjct: 76 IIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIA 135
Query: 43 YARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD 102
++ G+VE A+W + + L ++ + ++LD L K+GR + + +
Sbjct: 136 FSEMGLVEEALWVYYKMDVLPAMQACN-------MVLDGLVKKGRFDTMWKVYGDM--VA 186
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ +P V Y L++G R + A R + EM ++ + P VV Y L+ G C R+
Sbjct: 187 RGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISE 246
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A + + MR G+ PN YNT++DG + ++ + L P +VT+ L+
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILID 306
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CK ++ A K L M S G +P+ YN + K G + +A++L+ ++ + P
Sbjct: 307 GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP 366
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D TY IL+K LC D+++ A + +EMK +G + T LI C+ ++A
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
M +G+ P+ +TF L D + K G A L
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 188/393 (47%), Gaps = 26/393 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
M+ K A L + +G +P+ V TF ILI + MV A + + A
Sbjct: 269 MMDGYCKIAHVKKALELYXEMLGDGLLPNVV---TFGILIDGLCKTDEMVSARKFLIDMA 325
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNG 118
+ +V N ++ L+D CK G + SE E+++ P V Y+IL+ G
Sbjct: 326 S-FGVVPNI----FVYNCLIDGYCKAGNL---SEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+++A+ EM+K+ PN VTY TL++GYC+ +++AI + +M ++GIEPN
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I ++T+IDG +AG+ E G+ ++ P +V YT+L+ G+ K G+ + A ++ K
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY-------------RKMIESGYTPDRL 285
M G P+ T + K G++ DA+ L+ ++ S +P+ +
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHV 557
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
Y L++ LC + ++ A + +M+C G D+ T ++I R + D+
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
++ G++P+ ++ L +++ G A C
Sbjct: 618 LKMGIIPNSSVYRVLAKGYEESGYLKSALSFCG 650
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 189/370 (51%), Gaps = 12/370 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L AK ++ L + + + +P+ V TF +L+R + R GMVE AI E +
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEV---TFDMLVRFFCRGGMVERAIQVLEQMS 343
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +L I+++++CKQGRV A ++ + S P Y +L G
Sbjct: 344 GHGCAAN----TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS--PDTISYTTVLKGLC 397
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R++ +DA+ EM ++N PN VT+ T + C+ +++A L+++M + G E N +
Sbjct: 398 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV 457
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +++G GR V +E F P +TYT+L+ G C A L+ A+++L M
Sbjct: 458 TYNALVNGFCVQGR---VDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEM 514
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ + P+ T+N +F + G +++A+ L +M+E G TP+ +TY+ LL + K+
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+++ + G D+ T + +I +L R + +EA F + G+ P + + ++
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634
Query: 361 NDEFKKRGMT 370
KR T
Sbjct: 635 LLALCKRCNT 644
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 19/384 (4%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA---IWTFEFANNLD 63
+ + D+A L + G V F + L+ Y R G ++AA I + A +
Sbjct: 122 RGRTSDAARVLRAAERSGTAVDVFA----YNTLVAGYCRYGQLDAARRLIASMPVAPD-- 175
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
A + ++ LC +GRV A L + P+V Y +LL +S
Sbjct: 176 --------AYTYTPIIRGLCDRGRVGEALSLLDDM--LHRGCQPSVVTYTVLLEAVCKST 225
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
A EMR + TPN+VTY ++ G CR RVD A + + G +P+ + Y
Sbjct: 226 GFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 285
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
TV+ GL A R+E+V + + P VT+ LV+ +C+ G +E A ++L+ M
Sbjct: 286 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 345
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G + T N K G+V+DA M G +PD ++Y +LK LC+ ++ + A
Sbjct: 346 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 405
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ KEM + C + T I +LC+ ++A+ E M G + +T+ L +
Sbjct: 406 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNG 465
Query: 364 FKKRGMTALAQKLCNVMSSVPRSM 387
F +G A +L M P ++
Sbjct: 466 FCVQGRVDSALELFYSMPCKPNTI 489
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 152/324 (46%), Gaps = 34/324 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ +C++GRV A E+ ++ + P Y +L G +K +D E + E
Sbjct: 249 YNVIINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 306
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++N PN VT+ LV +CR V+RAI+++++M G N + N VI+ + + GR
Sbjct: 307 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 366
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + P ++YT+++KG C+A E A ++LK M+ + P+ T+N
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESG----------------------------YT----P 282
F + G +E A L +M E G Y+ P
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 486
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY LL LC ++LD A ++ EM + C ++ T +L+ C+ DEA
Sbjct: 487 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 546
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKK 366
E M+ G P+ +T+ L D K
Sbjct: 547 EQMMEHGCTPNLITYNTLLDGITK 570
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 12/314 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A+ ++ A LL + + + P+ V+ +TF+ ++ + G++E A E +
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL---CQKGLIEQATMLIEQMS 448
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + L++ C QGRV +A E F+ P Y LL G
Sbjct: 449 EHGCEVNIVT----YNALVNGFCVQGRVDSALELFYS-----MPCKPNTITYTTLLTGLC 499
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + A EM +++ PNVVT+ LV +C+ +D AI LV++M + G PN I
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 559
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++DG+ + EE ++ + P +VTY+S++ + +E A K+ ++
Sbjct: 560 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 619
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P YN K + A++ + M+ +G P+ LTY L++ L ED L
Sbjct: 620 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFL 679
Query: 301 DLAIQVSKEMKCRG 314
+ +E+ RG
Sbjct: 680 KETRDLLRELCSRG 693
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 124/277 (44%), Gaps = 3/277 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V + L+ R DA R + +V Y TLV GYCR ++D A R
Sbjct: 106 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 165
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ M + P+A Y +I GL + GR E +++ L P++VTYT L++ C
Sbjct: 166 LIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 222
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K+ A ++L M ++G P+ TYN + G+V+DA ++ G+ PD +
Sbjct: 223 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 282
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y +LK LC + + ++ EM + C + T ML+ CR + A E M
Sbjct: 283 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 342
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G + + + K+G A + N M S
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 379
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 20/355 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I + K D A+ L+ +G + PD +S T + G+ A W E A
Sbjct: 357 VINTICKQGRVDDAF-QFLNNMGSYGCSPDTISYTTVL--------KGLCRAERW--EDA 405
Query: 60 NNL--DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
L +MV KN F + LC++G ++ A+ + E + YN L+
Sbjct: 406 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE--HGCEVNIVTYNALV 463
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+ V A + M PN +TY TL+ G C R+D A L+ EM ++
Sbjct: 464 NGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 520
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + +N ++ + G +E ++E+ + P ++TY +L+ G K + E A ++
Sbjct: 521 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALEL 580
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L ++S G P TY+ S+ +VE+A+ ++ + + G P + Y+ +L LCK
Sbjct: 581 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 640
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D AI M GC + T LI L E ++ RG++
Sbjct: 641 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 182/380 (47%), Gaps = 10/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L K+ F+ AW + + G ++ + +F I+I+ G ++ FE
Sbjct: 136 LLILLIKSNFFEKAWRVFNETKGNVKLDVY----SFGIMIKGCCEVGYLDKG---FEVLG 188
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + ++ L+D CK G ++ + F+K ELD Y +L+NG+F
Sbjct: 189 QMEEM-GLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELD--VVANQYTYTVLINGFF 245
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ KD + +M+ + PNV TY +++ C +++ A L EMR+ G+ N +
Sbjct: 246 KMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVV 305
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+I GL + R E +M R P +++Y +L+ GYC G+L+ AS + M
Sbjct: 306 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 365
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G PS TYN FS+ ++ R+M G +P ++TY IL+ L + D +
Sbjct: 366 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNI 425
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A Q+ M+ G D+ +LIH LC + EAS F+ + L P+ + + +
Sbjct: 426 EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 485
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+ K G + A +L M
Sbjct: 486 IYGYCKEGSSYRALRLLKEM 505
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 154/318 (48%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + + G+ + I +E +V N + + ++ C G++ A E
Sbjct: 236 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYT----YNSMICRCCNDGKLNNAFEL 291
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + A V YN L+ G + + V +AER M+++ ++PN+++Y TL++GY
Sbjct: 292 FDEMRE--RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGY 349
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + +D+A L +M+ G P+ YN +I G EA V+ M+ P+
Sbjct: 350 CSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSK 409
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT L+ ++ ++E A +I M G + Y G +++A L++
Sbjct: 410 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 469
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ E P+ + Y+ ++ CKE A+++ KEM G ++ + I +LC+ K
Sbjct: 470 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEK 529
Query: 335 FDEASAEFEDMIRRGLVP 352
+ EA +DMI GL P
Sbjct: 530 WTEAEVLLKDMIELGLKP 547
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G + AS F++ K QS P++ YNIL+ G+ +KN E
Sbjct: 342 YNTLIDGYCSIGNLDKASSLFNQMKSSGQS--PSLATYNILIAGFSEAKNSAGVTDMVRE 399
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++P+ VTY L++ R +++A ++ M K G+ + +Y +I GL G
Sbjct: 400 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 459
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E S + + P V Y +++ GYCK G A ++LK M G +P+ +YN
Sbjct: 460 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
+ K K +A L + MIE G P ++++ K
Sbjct: 520 TIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISK 557
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 8/299 (2%)
Query: 95 FHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
FH+ + PT V ++ ++N RS+ + A ++ +M + P T+ L+
Sbjct: 80 FHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLIL 139
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEP 210
+ ++A R+ E K ++ + + +I G E G + EV G ME +
Sbjct: 140 LIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGL--- 195
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +V YT+L+ G CK GD+E ++ M + + TY F K G +D +
Sbjct: 196 SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIE 255
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
LY KM +G P+ TY+ ++ C + KL+ A ++ EM+ RG ++ T LI LC
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 315
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ + EA M R GL P+ +++ L D + G A L N M S +S L
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSL 374
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 164/331 (49%), Gaps = 6/331 (1%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI +R G +E AI + +V N + L++ LC GR A +
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN----TVTYNALINELCVGGRFSTALK 394
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
FH E S A T + YN ++ G +++ A + +M K P VVTY TL+ G
Sbjct: 395 IFH-WMEGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y V+ A RL+ M++ G EP+ YN ++ G + G+ E S + + C P
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
V+YT+L+ G+ K G ++ A +LK M G P+ +YN SK + +A +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+E G P+ +TY L+ LC+ + A ++ +M+ R C +L T + LI+ LC+
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
K DEA ++M R+GL P +TF L D F
Sbjct: 633 KADEAEILLKEMERKGLAPDEVTFTSLIDGF 663
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 194/411 (47%), Gaps = 44/411 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I +L+K + A L+L +I +++ PD T+ LI + R ++ A F+
Sbjct: 204 LINILSKKGKVREAE-LILSQIFQYDLSPDVF---TYTSLILGHCRNRNLDLAFGVFD-- 257
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD---------------- 102
MVK D + + L++ LC +GRV A + + E
Sbjct: 258 ---RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Query: 103 -----------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ P V+ Y L++G R ++ A + +M KE + PN V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ C R A+++ M G N YN +I GL G E+ + E+
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L P PT+VTY +L+ GY G++ A+++L +M G P TYN FSK+GK+
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E A +++M+E G P+ ++Y L+ K+ K+D+A+ + K M+ GC+ ++++ +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
I+ L + +F EA + M+ +GL+P+ +T+ L D + G T A K+
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 167/324 (51%), Gaps = 4/324 (1%)
Query: 59 ANNLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
A+ L+ + G SL+ LL L K V+ A + ++ L+ P++ +N L+
Sbjct: 148 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY--KQMLNSGIQPSLLTFNTLI 205
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
N + V++AE ++ + +++P+V TY +L+ G+CR R +D A + M KEG +
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN++ Y+T+I+GL GR +E M+E + PT+ TYT + C E A ++
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M RG P+ TY S+ GK+E A+ LY KM++ G P+ +TY+ L+ LC
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ A+++ M+ G + T +I LC ++A FE M++ G +P +T
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
+ L + + +G A +L ++M
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLM 469
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 147/337 (43%), Gaps = 37/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ L K+G+V+ A + + D S P V Y L+ G R++N+ A +
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLS--PDVFTYTSLILGHCRNRNLDLAFGVFDR 258
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------------------ 170
M KE PN VTY TL+ G C RVD A+ +++EM
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 171 -----------RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+K G PN Y +I GL G+ E G+ + L P VTY +
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ C G A KI M G L + TYN + G +E AM L+ KM++ G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P +TY+ L+ + ++ A ++ MK GC+ D T L+ + K + AS
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M+ GL P+ +++ L D K G +A L
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 9/340 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ V T+ LI G A+ F + + N + + ++ LC G
Sbjct: 370 VPNTV---TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT----YNEIIKGLCLGG 422
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A F K L PTV YN L+NG+ NV +A R M++ P+ T
Sbjct: 423 DIEKAMVLFEKM--LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y LV G+ + +++ A +EM + G+ PN + Y +IDG + G+ + +++R
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + +Y +++ G K A KI M+ +G LP+ TY + G+ +
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A ++ M + P+ TY L+ LC+E K D A + KEM+ +G D T T LI
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 660
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ + D A M+ G P+Y T+ L +K
Sbjct: 661 DGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 139/275 (50%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ +AP + +++ + ++ F E+ ++ + TL+ + V+
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A L K+M GI+P+ + +NT+I+ L + G+ E ++ + + P + TYTSL+
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+C+ +L+ A + M+ G P+ TY+ G+V++A+++ +MIE G
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P TY + + LC + + AI++ MK RGC ++ T T LI L R+ K + A
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ M++ GLVP+ +T+ L +E G + A K+
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K ++A L L K G E PD + T+ L+ +++ G +E+A + F+ +M
Sbjct: 454 LTKGNVNNAARLLDLMKENGCE-PD---EWTYNELVSGFSKWGKLESASFYFQ-----EM 504
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
V+ + + L+D K G+V A + +E+ P V YN ++NG +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM--GCNPNVESYNAVINGLSKEN 562
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+AE+ +M ++ + PNV+TY TL++G CR R A ++ +M K PN Y+
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL + G+ +E +++ P VT+TSL+ G+ G ++ A +L+ M+
Sbjct: 623 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM 682
Query: 244 GFLPSPTTYNYFFRYFSK 261
G P+ TY+ + K
Sbjct: 683 GCKPNYRTYSVLLKGLQK 700
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 185/381 (48%), Gaps = 11/381 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ K+ EFD A ++ + PD V+ + +LI RAG V+AAI +
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHN---VLIDARFRAGDVDAAIALVDSMA 219
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGW 119
N K G F +L LCK R A E F + +DQ S AP VR +NIL+ G+
Sbjct: 220 N----KGLKPGIVTFNSVLKGLCKHRRFDKAKEVF---RAMDQCSVAPDVRSFNILIGGF 272
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R V++A +F+ EM++ VTP+VV++ L+ + ++D A ++EM+ G+ P+
Sbjct: 273 CRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
++Y VI G AG E + + + P +VTY +L+ G CK L A ++L
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M RG P T+ + + G E A+ L+ ++ PD + Y+ L+ +C++
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A ++ +M R + T ++LI C + +EA ++M+ +G +P+ +T+
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512
Query: 360 LNDEFKKRGMTALAQKLCNVM 380
+ + + G Q+ M
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKM 533
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 11/355 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD VS F LI ++ G ++ A L +V + ++ +++ C+ G
Sbjct: 294 TPDVVS---FSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD----GVIYTMVIGGFCRAG 346
Query: 87 RVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ SE R E+ P V YN LLNG + + DAE EM++ VTP++
Sbjct: 347 ---SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ TL+ GYCR ++A++L + + + P+ + YN++IDG+ G + + + +
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E P VTY+ L+ +C+ G +E A L M+S+G LP+ TYN + + + G V
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ +KM++ PD +T++ L+ KE+ + A V M+ D T M+
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I+ +EA F+ M G+ P T+ L + G + A +L + M
Sbjct: 584 INGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 172/352 (48%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + + D A L + G VPD V + ++I + RAG + A+ +
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGLVPDGV---IYTMVIGGFCRAGSMSEALRVRDEMV 359
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + + + LL+ LCKQ R+ A E ++ KE + P + + L++G+
Sbjct: 360 GLGCLPDVVT----YNTLLNGLCKQHRLLDAEELLNEMKE--RGVTPDLCTFTTLIHGYC 413
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R N + A + + + + + P+VV Y +L++G CR + +A L +M I PN +
Sbjct: 414 RDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHV 473
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +ID E G+ EE G ++ + P ++TY S++KGYC++G+++ + L+ M
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ LP T+N + K + A N++ M + PD +TY++++ ++ +
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ A +V K+M G + D T LI+ EA ++M+ RG P
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 9/368 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L K + FD A + PD S F ILI + R G VE A+ ++
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS---FNILIGGFCRVGEVEEAMKFYKEMQ 289
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + S F L+ +G++ A+ Y + K L P +Y +++ G+
Sbjct: 290 QRGVTPDVVS----FSCLIGLFSTRGKMDHAAAYLREMKGL--GLVPDGVIYTMVIGGFC 343
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ ++ +A R EM P+VVTY TL+ G C+ R+ A L+ EM++ G+ P+
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ T+I G G FE+ + + L P +V Y SL+ G C+ GDL A+++ M
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+R P+ TY+ + G+VE+A +M+ G P+ +TY+ ++K C+ +
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
Q ++M DL T LIH + A F M + + P +T+ +
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583
Query: 361 NDEFKKRG 368
+ F ++G
Sbjct: 584 INGFSEQG 591
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 126/248 (50%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
NI+++ + +S A+ EM K V P+VVT+ L++ R VD AI LV M
Sbjct: 161 NIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+G++P + +N+V+ GL + RF++ + C P + ++ L+ G+C+ G++E
Sbjct: 221 KGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEE 280
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A K K M RG P +++ FS GK++ A R+M G PD + Y +++
Sbjct: 281 AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+ + A++V EM GC D+ T L++ LC+ ++ +A +M RG+ P
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400
Query: 353 HYLTFKRL 360
TF L
Sbjct: 401 DLCTFTTL 408
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ + A+ L + + +P+ + T+ +I+ Y R+G V+ +F + M N
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIM---TYNSIIKGYCRSGNVKKGQ---QFLQKM-MQDNIL 539
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFH-KRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
F L+ K+ + A F+ KE+ Q P YN+++NG+ N+++A
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ---PDAVTYNMIINGFSEQGNMEEA 596
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R + +M + P+ TY +L+ G+ A +L EM G P+
Sbjct: 597 GRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 11/205 (5%)
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A R E VS + L P P + L++ Y ++ A + ++++ +
Sbjct: 69 ASRREIVSSL----LASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASA 124
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
N S+ G A YR ++ S + T +I++ CK + D A V EM+
Sbjct: 125 SNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEME 184
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL------NDEFK 365
R D+ T +LI R D A A + M +GL P +TF + + F
Sbjct: 185 KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFD 244
Query: 366 KRGMTALAQKLCNVMSSVPRSMELL 390
K A C+V V RS +L
Sbjct: 245 KAKEVFRAMDQCSVAPDV-RSFNIL 268
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 191/388 (49%), Gaps = 22/388 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +LAK F A LL D++ VP +S + LIRRY RA M A F
Sbjct: 150 MIDLLAKHHHFPLARHLL-DEMRERSVP--ISAQLILALIRRYVRAEMPSEASDLFR--- 203
Query: 61 NLDMVKNFDSGA---SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
++ + +GA + LL +L K+ A F K + + P V +Y L++
Sbjct: 204 ---RMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSV---FTPDVVLYTTLVH 257
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
W RS + +AER + EM++ VTPNV TY +++ R +V RA L+ +M G P
Sbjct: 258 AWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPP 317
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAG--DLEGA 233
N +N ++ V+AGR E+V + R L CEP ++TY L++ +C G +L+ A
Sbjct: 318 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPD--IITYNFLMETHCGKGQSNLDAA 375
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K+L MI++G +P T+N + G V A LY +M E P+ +TY++L+++
Sbjct: 376 MKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRL 435
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVP 352
E +D+ +++ K+M +G + +++T LI C + A +M+ + L P
Sbjct: 436 FNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKP 495
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + +K G ++L +M
Sbjct: 496 TKPVYDMVLALLRKAGQLRRHEELVEMM 523
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 10/253 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + +A + A LL I P+ TF ++R + +AG E +
Sbjct: 290 VIDAMYRAGQVPRAQELLCQMIDSGCPPNTA---TFNAIMRAHVKAGRSEQVLQVHNQMR 346
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + + L+++ C +G+ + + + + P +N +L
Sbjct: 347 QLGCEPDIIT----YNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVL 402
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
NV A + + M++ PNVVTY L+ + + +D +R+ K+M +G+EPN
Sbjct: 403 VLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVN 462
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
Y +I+ G ++ + M R +V E PT Y ++ KAG L ++++
Sbjct: 463 TYAALIEAFCGRGNWKR-AHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVE 521
Query: 239 MMISRGFLPSPTT 251
MM+ RGF+ P
Sbjct: 522 MMVDRGFISRPAN 534
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 175/373 (46%), Gaps = 11/373 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K FD+ W + D + P+ V T+ LI R G A F+ +M
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVV---TYGTLIDGCCRQGDFLKAFRLFD-----EM 219
Query: 65 V-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K ++ IL+ LC + R+ A F R + P + YN +++G+ +
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMF--RTMRNSGMLPNLYTYNTMMDGYCKIA 277
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+VK A + EM + + PNVVT+G L++G C+ + A + + +M G+ PN VYN
Sbjct: 278 HVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYN 337
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+IDG +AG E + E P + TY+ L+KG C +E A +L+ M +
Sbjct: 338 CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
GFLP+ TYN + K G +E A+ + +M E G P+ +T+ L+ CK K++ A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ + EM +G D+ T LI + EA ++M GL P+ T L D
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Query: 364 FKKRGMTALAQKL 376
K G + A KL
Sbjct: 518 LCKDGRISDAIKL 530
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 186/383 (48%), Gaps = 26/383 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
M+ K A L + +G +P+ V TF ILI + MV A + + A
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVV---TFGILIDGLCKTDEMVSARKFLIDMA 325
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNG 118
+ +V N ++ L+D CK G + SE E+++ P V Y+IL+ G
Sbjct: 326 S-FGVVPNI----FVYNCLIDGYCKAGNL---SEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+++A+ EM+K+ PN VTY TL++GYC+ +++AI + +M ++GIEPN
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I ++T+IDG +AG+ E G+ ++ P +V YT+L+ G+ K G+ + A ++ K
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY-------------RKMIESGYTPDRL 285
M G P+ T + K G++ DA+ L+ ++ S +P+ +
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHV 557
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
Y L++ LC + ++ A + +M+C G D+ T ++I R + D+
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617
Query: 346 IRRGLVPHYLTFKRLNDEFKKRG 368
++ G++P+ ++ L +++ G
Sbjct: 618 LKMGIIPNSSVYRVLAKGYEESG 640
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 182/401 (45%), Gaps = 32/401 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I VL AK + A CL+ D +I + +R + +++ N
Sbjct: 76 IIHVLTGAKLYAKARCLMRD----------------LIQCLQNSRRSRICCSVF-----N 114
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L +++ ++F +L+ + + G V+ A ++K L P ++ N++L+G
Sbjct: 115 VLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL-----PAMQACNMVLDGLV 169
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + + +M +PNVVTYGTL++G CR +A RL EM ++ I P +
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y +I GL R E M P + TY +++ GYCK ++ A ++ + M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G LP+ T+ K ++ A M G P+ Y+ L+ CK L
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A+ + E++ D+ T ++LI LC + + +EA ++M ++G +P+ +T+ L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 361 NDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSRCK 395
D + K G A ++C+ M+ ++ L+D CK
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ L+ LC GR+ AS++F + P V +++ G FR+ +++D
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMR--CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQA 615
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++ K + PN Y L +GY + A+R +++ GI
Sbjct: 616 DILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 174/360 (48%), Gaps = 10/360 (2%)
Query: 18 LLDK-IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
L DK IG P+ V T+ LI + G AAI N ++
Sbjct: 160 LFDKMIGEGFQPNVV---TYGTLINGLCKVGSTSAAIRLLRSMEQ----GNCQPDVVVYT 212
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++DSLCK +V A F + + Q +P++ YN L++ K EM
Sbjct: 213 SIIDSLCKDRQVTQAFNLF--SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 270
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ PNVV + T+V+ C+ +V A +V M K G+EPN + YN ++DG +
Sbjct: 271 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 330
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + + + P +V+Y++L+ GYCK +E A + + M + +P+ TY+
Sbjct: 331 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 390
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
G+++DA+ L+ +M+ G PD ++Y ILL LCK +LD AI + K ++ D
Sbjct: 391 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 450
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+ T++I +CR + + A F ++ +GL P+ T+ + + ++G+ A A KL
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++S C R+ A K +L P + +N L+ G + + + +
Sbjct: 106 LNILINSFCHLQRLGFAFSVLAKILKLGHQ--PNIATFNTLIRGLCVEGKIGEVLHLFDK 163
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E PNVVTYGTL+ G C++ AIRL++ M + +P+ +VY ++ID L + +
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 223
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + P++ TY SL+ C + + + +L M++ +P+ ++
Sbjct: 224 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV +A ++ MI+ G P+ +TY+ L+ C ++D A++V M C+G
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ + + LI+ C++ + ++A FE+M R+ L+P+ +T+ L
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 33/289 (11%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHK----------------------RKELDQS------- 104
+F ++D+LCK+G+V A + R E+D++
Sbjct: 280 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339
Query: 105 ----WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
+AP V Y+ L+NG+ + + ++ A + EM ++ + PN VTY TL+ G C + R+
Sbjct: 340 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 399
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
AI L EM G P+ + Y ++D L + R +E +++ P + YT +
Sbjct: 400 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 459
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G C+AG+LE A + + S+G P+ TY + G + +A L+ +M GY
Sbjct: 460 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+P+ TY+++ + + ++ IQ+ +EM RG D+ TST+L+ +L
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ + LL + K+ +M + PN+ T L+ +C L+R+ A +
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G +PN +NT+I GL G+ EV + ++ + P +VTY +L+ G CK
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A ++L+ M P Y K +V A NL+ +MI G +P T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LC + + EM ++ + ++ LC+ K EA + MI
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305
Query: 347 RRGLVPHYLTFKRLND 362
+RG+ P+ +T+ L D
Sbjct: 306 KRGVEPNVVTYNALMD 321
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 15/288 (5%)
Query: 120 FRSKNVK-----DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
F SK++ DA + M + P++ + L+ +++ + L +M G
Sbjct: 39 FHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFG 98
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I PN N +I+ R ++ + L P + T+ +L++G C G +
Sbjct: 99 IPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVL 158
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ MI GF P+ TY K G A+ L R M + PD + Y ++ L
Sbjct: 159 HLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 218
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CK+ ++ A + EM +G + T LIH LC + ++ +A +M+ ++P+
Sbjct: 219 CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 278
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME--------LLDSRC 394
+ F + D K G A + ++M + R +E L+D C
Sbjct: 279 VIFSTVVDALCKEGKVMEAHDVVDMM--IKRGVEPNVVTYNALMDGHC 324
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 9/236 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS T LI Y + +E A++ FE +++ N + L+ LC GR
Sbjct: 346 PDVVSYST---LINGYCKIQRIEKAMYLFEEMCRKELIPN----TVTYSTLMHGLCHVGR 398
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A FH+ + + P Y ILL+ +++ + +A + N+ P++ Y
Sbjct: 399 LQDAIALFHEM--VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+++G CR ++ A L + +G+ PN Y +I+GL + G E S +
Sbjct: 457 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 516
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P TY + +G+ + + ++L+ M++RGF +T S G
Sbjct: 517 KGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L A L + + ++PDFVS + IL+ + ++ AI +
Sbjct: 393 LCHVGRLQDAIALFHEMVTRGQIPDFVS---YCILLDYLCKNRRLDEAIALLKAIEG--- 446
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
N D ++ I++D +C+ G ++AA + F + P V Y I++NG +
Sbjct: 447 -SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS--KGLHPNVWTYTIMINGLCQQGL 503
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +A + + EM+++ +PN TY + G+ R R I+L++EM G +
Sbjct: 504 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 563
Query: 185 VIDGLVEAGRFEEVSGMMERFL 206
+++ L + G + V ++ FL
Sbjct: 564 LVEMLSDDGLDQSVKQILSEFL 585
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
R L P P++ +T L+ K + M S G P+ T N F
Sbjct: 57 NRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHL 116
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL---------------------- 300
++ A ++ K+++ G+ P+ T++ L++ LC E K+
Sbjct: 117 QRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTY 176
Query: 301 -------------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
AI++ + M+ C D+ T +I LC+ + +A F +MI
Sbjct: 177 GTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH 236
Query: 348 RGLVPHYLTFKRLNDEFKK----RGMTALAQKLCN--VMSSVPRSMELLDSRCKD 396
+G+ P T+ L + +TAL ++ N +M +V ++D+ CK+
Sbjct: 237 QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 291
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 194/411 (47%), Gaps = 44/411 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I +L+K + A L+L +I +++ PD T+ LI + R ++ A F+
Sbjct: 204 LINILSKKGKVREAE-LILSQIFQYDLSPDVF---TYTSLILGHCRNRNLDLAFGVFD-- 257
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD---------------- 102
MVK D + + L++ LC +GRV A + + E
Sbjct: 258 ---RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Query: 103 -----------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ P V+ Y L++G R ++ A + +M KE + PN V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ C R A+++ M G N YN +I GL G E+ + E+
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L P PT+VTY +L+ GY G++ A+++L +M G P TYN FSK+GK+
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E A +++M+E G P+ ++Y L+ K+ K+D+A+ + K M+ GC+ ++++ +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
I+ L + +F EA + M+ +GL+P+ +T+ L D + G T A K+
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 167/324 (51%), Gaps = 4/324 (1%)
Query: 59 ANNLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
A+ L+ + G SL+ LL L K V+ A + ++ L+ P++ +N L+
Sbjct: 148 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY--KQMLNSGIQPSLLTFNTLI 205
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
N + V++AE ++ + +++P+V TY +L+ G+CR R +D A + M KEG +
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN++ Y+T+I+GL GR +E M+E + PT+ TYT + C E A ++
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M RG P+ TY S+ GK+E A+ LY KM++ G P+ +TY+ L+ LC
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ A+++ M+ G + T +I LC ++A FE M++ G +P +T
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
+ L + + +G A +L ++M
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLM 469
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 164/343 (47%), Gaps = 10/343 (2%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI +R G +E AI + +V N + L++ LC GR A +
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN----TVTYNALINELCVGGRFSTALK 394
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
FH E S A T + YN ++ G +++ A + +M K P VVTY TL+ G
Sbjct: 395 IFH-WMEGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y V+ A RL+ M++ G EP+ YN ++ G + G+ E S + + C P
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
V+YT+L+ G+ K G ++ A +LK M G P+ +YN SK + +A +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+E G P+ +TY L+ LC+ + A ++ +M+ R C +L T + LI+ LC+
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K DEA E M G P T+ L ++G A++L
Sbjct: 633 KADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 671
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 178/423 (42%), Gaps = 77/423 (18%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ V T+ LI G A+ F + + N + + ++ LC G
Sbjct: 370 VPNTV---TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT----YNEIIKGLCLGG 422
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN------- 139
++ A F K L PTV YN L+NG+ NV +A R L++ KEN
Sbjct: 423 DIEKAMVLFEKM--LKMGPLPTVVTYNTLINGYLTKGNVNNAARL-LDLMKENGCEPDEW 479
Query: 140 -----------------------------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+ PN V+Y L++G+ + +VD A+ L+K M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ G PN YN VI+GL + RF E + ++ + P ++TYT+L+ G C+ G
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 231 EGASKILKMMISRGFLPS-----------------------------PT--TYNYFFRYF 259
+ A KI M R LP+ PT TY+
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGL 659
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
+ G+ +A L + M E G+ PDR Y+ LL CK ++D A+++ ++ +G + L
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
LI LC+ + +EA A F++M+ + + + L D K G L KL ++
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 779
Query: 380 MSS 382
M S
Sbjct: 780 MES 782
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 147/337 (43%), Gaps = 37/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ L K+G+V+ A + + D S P V Y L+ G R++N+ A +
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLS--PDVFTYTSLILGHCRNRNLDLAFGVFDR 258
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------------------ 170
M KE PN VTY TL+ G C RVD A+ +++EM
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 171 -----------RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+K G PN Y +I GL G+ E G+ + L P VTY +
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ C G A KI M G L + TYN + G +E AM L+ KM++ G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P +TY+ L+ + ++ A ++ MK GC+ D T L+ + K + AS
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M+ GL P+ +++ L D K G +A L
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 139/275 (50%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ +AP + +++ + ++ F E+ ++ + TL+ + V+
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A L K+M GI+P+ + +NT+I+ L + G+ E ++ + + P + TYTSL+
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+C+ +L+ A + M+ G P+ TY+ G+V++A+++ +MIE G
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P TY + + LC + + AI++ MK RGC ++ T T LI L R+ K + A
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ M++ GLVP+ +T+ L +E G + A K+
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 29/230 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFH---KRKELDQSWA------------------------- 106
+ L+D LC+ GR + A + FH KRK L +
Sbjct: 586 YTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGC 645
Query: 107 -PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
PT+ Y+ L++G R +AE+ +M++ P+ Y +L+ +C+ VD A++
Sbjct: 646 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 705
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+ + +G + + +Y +I L +AG+ EE + + L E + +T LV G
Sbjct: 706 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 765
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
K G+L+ K+L +M S+ F P+ TY R S+ GK ++ L K+
Sbjct: 766 KEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 160/322 (49%), Gaps = 14/322 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI +RAG+ + W NL + + F A F IL+D LCK+G+V A +
Sbjct: 218 TYNSLIHGLSRAGLWKEVTWFL----NLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273
Query: 95 F----HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
HK KE P + YN L+NG ++DA + + + + NV +Y L
Sbjct: 274 LELMHHKGKE------PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 327
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ GYC+ +++D A RL +EMR +G++P+ + YNT+I L ++GR + C
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ TY L+ G CK G LE A + + + P+ ++ + GK+E+A
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ ++ ++G PD + Y+IL+ LC + L A+++ +M+ +GC D T ++I L
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 507
Query: 331 RMYKFDEASAEFEDMIRRGLVP 352
+ + EA E+M R P
Sbjct: 508 KENEIHEAIQLLEEMRNRNFSP 529
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 172/343 (50%), Gaps = 8/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I + GM A+ F ++ + ++ L+D LC+ GR+K A E+
Sbjct: 148 TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPD----VVVYSSLMDGLCRFGRLKEALEF 203
Query: 95 FHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F KE++ + + V YN L++G R+ K+ F M +P+ T+ L++G
Sbjct: 204 F---KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 260
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +V A ++++ M +G EP+ + YNT+++GL G+ E+ + + E
Sbjct: 261 LCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ +Y L+ GYCK ++ A ++ + M +G PS TYN + G+V A L+
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 380
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G TY +LL LCK L+ AI + + +K +++ ++L+ +CR
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG 440
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K +EA +F+++ + GL P + + L + +GM + A KL
Sbjct: 441 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 141/297 (47%), Gaps = 3/297 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + IL++ LCK + A + K K + V Y ++++ + +A
Sbjct: 112 AKTYGILINGLCKARKTGLAIKLHEKMK---GNCKGDVFTYGMIIDSLCKDGMTTEALDM 168
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM + P+VV Y +L++G CR R+ A+ KEM GI + YN++I GL
Sbjct: 169 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 228
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
AG ++EV+ + + P T+T L+ G CK G + A +IL++M +G P T
Sbjct: 229 AGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILT 288
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN G++EDA L+ + + G + +Y+IL+ CK+ K+D A ++ +EM+
Sbjct: 289 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR 348
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+G T LI LC+ + A F +M G T+ L D K G
Sbjct: 349 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 405
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 159/337 (47%), Gaps = 9/337 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ F+ A L+ + + + A + F + E + + Y IL+NG +++
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTE--KGLFGDAKTYGILINGLCKARKT 128
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A + +M K N +V TYG +++ C+ A+ + EM GI P+ +VY+++
Sbjct: 129 GLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+DGL GR +E + + TY SL+ G +AG + + L +M+ RGF
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P T+ K GKV +A + M G PD LTY+ L+ LC +L+ A +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ + + RG +++ + +LI+ C+ K DEA FE+M +GL P +T+ L
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367
Query: 366 KRGMTALAQKLCNVMSSVPRSME------LLDSRCKD 396
+ G AQKL M + + ++ LLD CK+
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN 404
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 178/352 (50%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K D A+ L + PD + T+ LI + AG + A F N
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVI---TYTTLICGFCLAGQLMEA---FGLLN 209
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++KN + + L+D+LCK+G+VK + + + P V +Y+IL++G+
Sbjct: 210 EM-ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTK--KGVKPDVVIYSILMDGYC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V+ A++ +L M + V P+V +Y ++ G C+ +RVD A+ L++EM + + P+ +
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++IDGL + GR + + + +VTY SL+ G CK +L+ A + M
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG P+ TY K G+++ L++ ++ GY D TY +++ LCKE
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+ + +M+ GC + T ++I L + D+A +MI +GL+P
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 173/386 (44%), Gaps = 46/386 (11%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
VPD V T ILI + G + F F+ ++K + + L+ LC +
Sbjct: 42 VPDLV---TLSILINCFCHLGQM-----AFSFSVLGKILKLGYQPNTIILNTLMKGLCLK 93
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G VK S +FH K + Q + Y ILLNG + + A + + + P+VV
Sbjct: 94 GEVKK-SLHFHD-KVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y T+++G C+ + VD A L EM GI P+ I Y T+I G AG+ E G++
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211
Query: 206 L-----------------VCEPG------------------PTMVTYTSLVKGYCKAGDL 230
+ +C+ G P +V Y+ L+ GYC G++
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A +I +M+ G P +YN K +V++AMNL R+M+ PD +TY L
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK ++ + ++KEM RG +L T L+ LC+ D+A A F M RG+
Sbjct: 332 IDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
P+ T+ L D K G Q L
Sbjct: 392 QPNKYTYTALIDGLCKGGRLKKGQAL 417
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C G++ A ++ + ++ P + YN L++ + VK+++
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEM--ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+ V P+VV Y L++GYC + V +A ++ M + G+ P+ YN +I+GL + R
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ L P VTY+SL+ G CK G + + K M RG + TYN
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++ A+ L+ KM E G P++ TY L+ LCK +L + + + +G
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
ID+ T T++I LC+ FDEA A M G +P+ +TF+ + ++ A+
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAE 485
Query: 375 KLCNVM 380
KL + M
Sbjct: 486 KLLHEM 491
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 148/304 (48%), Gaps = 4/304 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D LCK V A + + + + P V Y L+ G+ + + +A
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNA--RGIFPDVITYTTLICGFCLAGQLMEAFGLLN 209
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM +N+ PN+ TY TL++ C+ +V + L+ M K+G++P+ ++Y+ ++DG G
Sbjct: 210 EMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVG 269
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ + + P + +Y ++ G CK ++ A +L+ M+ + +P TY+
Sbjct: 270 EVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYS 329
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G++ ++L ++M G + +TY+ LL LCK LD AI + +MK R
Sbjct: 330 SLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKER 389
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM--TA 371
G + T T LI LC+ + + A F+ ++ +G T+ + K GM A
Sbjct: 390 GIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEA 449
Query: 372 LAQK 375
LA K
Sbjct: 450 LAMK 453
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + + +L + K+ +M + + P++VT L+ +C L ++ + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G +PN I+ NT++ GL G ++ ++ + V+Y L+ G CK
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ A K+L+ + R P Y+ K V++A +LY +M G PD +T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ C +L A + EM + + ++ T LI LC+ K E+ M
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++G+ P + + L D + G A+++ VM
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVM 281
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 108/240 (45%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P ++ +G ++ +++ I L K+M +GI P+ + + +I+ G+ +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + L P + +L+KG C G+++ + ++++GF +Y K
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G+ A+ L R + + PD + Y ++ LCK+ +D A + EM RG D+ T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T LI C + EA +MI + + P+ T+ L D K G ++ L VM+
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 23/359 (6%)
Query: 44 ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE---------------ILLDSLCKQGRV 88
AR G+ + N L +G LFE L+DSLCK G +
Sbjct: 73 ARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDL 132
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE--NVTPNVVT 146
+ A + P V Y++L+NG + + +A EM ++ +V PN++T
Sbjct: 133 EEARRLHGGMSS--RGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 190
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
Y + ++G C+ A L++ +R + P+ + ++T+IDGL + G+ +E +
Sbjct: 191 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DD 248
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P +VTY +LV G CKA +E A +++ M+ +G P TY+ F K +
Sbjct: 249 MIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 308
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V++A+ L M G TP+ +T++ ++ LCK D+ A Q++ ++ R D T +
Sbjct: 309 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNI 368
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
LI C+ F++ASA FE+M+ + + P +TF L D K G A+ + ++M ++
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 13/354 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
PD V TF LI + G + A N DM+ + + L++ LCK
Sbjct: 223 PDTV---TFSTLIDGLCKCGQTDEAC-------NDDMIAGGYVPNVVTYNALVNGLCKAD 272
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+++ A +D+ P V Y++L++ + ++ V +A M TPNVVT
Sbjct: 273 KMERAHAMIESM--VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ ++++G C+ R A ++ ++ + P+ + +N +I G +AG FE+ S + E +
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++T+ +L+ G CKAG +E A IL +M + G P+ TYN K G++E
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ +M+ SG P+ +TY L+ LC+ + D A+Q+ ++K G D D T +L+
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
L + K ++A E+M+ +G P TF + G A +L V+
Sbjct: 511 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVV 564
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDA-ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+S + +V YNI+L R+ A E F EM ++ V P +VTY T++ G C+ +
Sbjct: 39 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTY 217
+ L +E+ K G P+ + YNT+ID L +AG EE GM R V P +VTY
Sbjct: 99 AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCV----PNVVTY 154
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYNYFFRYFSKFGKVEDAMNLYRK- 274
+ L+ G CK G ++ A ++++ M + LP+ TYN F K +A L R
Sbjct: 155 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 214
Query: 275 ----------------------------------MIESGYTPDRLTYHILLKILCKEDKL 300
MI GY P+ +TY+ L+ LCK DK+
Sbjct: 215 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKM 274
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A + + M +G D+ T ++L+ C+ + DEA M RG P+ +TF +
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 334
Query: 361 NDEFKK 366
D K
Sbjct: 335 IDGLCK 340
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 141/288 (48%), Gaps = 11/288 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA + + A ++ + PD + T+ +L+ + +A V+ A+
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVI---TYSVLVDAFCKASRVDEALELLHGMA 320
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGW 119
+ N + F ++D LCK R + E F ++ ++ P +NIL+ G
Sbjct: 321 SRGCTPNVVT----FNSIIDGLCKSDR---SGEAFQIALQVYNRMLVPDKVTFNILIAGA 373
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ N + A + EM +N+ P+V+T+G L++G C+ +V+ A ++ M G+ PN
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 433
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN ++ GL ++GR EE +E + P +TY SLV C+A + A +++
Sbjct: 434 VTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSK 493
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
+ S G+ P TYN K GK E A+ + +M+ G+ PD T+
Sbjct: 494 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 40/220 (18%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA F+ A L + + + PD + TF LI +AG VEAA +
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDVM---TFGALIDGLCKAGQVEAARDILDLMG 425
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH----------------------KR 98
NL + N + + +L+ LCK GR++ E+ +
Sbjct: 426 NLGVPPNVVT----YNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481
Query: 99 KELDQS-----------WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
D + W P YNIL++G ++S + A EM + P+ T+
Sbjct: 482 SRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
G R + + L++ + +G+ P+A ++++D
Sbjct: 542 AACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 174/360 (48%), Gaps = 10/360 (2%)
Query: 18 LLDK-IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
L DK IG P+ V T+ LI + G AAI N ++
Sbjct: 151 LFDKMIGEGFQPNVV---TYGTLINGLCKVGSTSAAIRLLRSMEQ----GNCQPDVVVYT 203
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++DSLCK +V A F + + Q +P++ YN L++ K EM
Sbjct: 204 SIIDSLCKDRQVTQAFNLF--SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 261
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ PNVV + T+V+ C+ +V A +V M K G+EPN + YN ++DG +
Sbjct: 262 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 321
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + + + P +V+Y++L+ GYCK +E A + + M + +P+ TY+
Sbjct: 322 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 381
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
G+++DA+ L+ +M+ G PD ++Y ILL LCK +LD AI + K ++ D
Sbjct: 382 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 441
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+ T++I +CR + + A F ++ +GL P+ T+ + + ++G+ A A KL
Sbjct: 442 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++S C R+ A K +L P + +N L+ G + + + +
Sbjct: 97 LNILINSFCHLQRLGFAFSVLAKILKLGHQ--PNIATFNTLIRGLCVEGKIGEVLHLFDK 154
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E PNVVTYGTL+ G C++ AIRL++ M + +P+ +VY ++ID L + +
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 214
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + P++ TY SL+ C + + + +L M++ +P+ ++
Sbjct: 215 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV +A ++ MI+ G P+ +TY+ L+ C ++D A++V M C+G
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ + + LI+ C++ + ++A FE+M R+ L+P+ +T+ L
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 33/289 (11%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHK----------------------RKELDQS------- 104
+F ++D+LCK+G+V A + R E+D++
Sbjct: 271 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330
Query: 105 ----WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
+AP V Y+ L+NG+ + + ++ A + EM ++ + PN VTY TL+ G C + R+
Sbjct: 331 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 390
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
AI L EM G P+ + Y ++D L + R +E +++ P + YT +
Sbjct: 391 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 450
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G C+AG+LE A + + S+G P+ TY + G + +A L+ +M GY
Sbjct: 451 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+P+ TY+++ + + ++ IQ+ +EM RG D+ TST+L+ +L
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ + LL + K+ +M + PN+ T L+ +C L+R+ A +
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G +PN +NT+I GL G+ EV + ++ + P +VTY +L+ G CK
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A ++L+ M P Y K +V A NL+ +MI G +P T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LC + + EM ++ + ++ LC+ K EA + MI
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296
Query: 347 RRGLVPHYLTFKRLND 362
+RG+ P+ +T+ L D
Sbjct: 297 KRGVEPNVVTYNALMD 312
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 15/288 (5%)
Query: 120 FRSKNVK-----DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
F SK++ DA + M + P++ + L+ +++ + L +M G
Sbjct: 30 FHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFG 89
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I PN N +I+ R ++ + L P + T+ +L++G C G +
Sbjct: 90 IPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVL 149
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ MI GF P+ TY K G A+ L R M + PD + Y ++ L
Sbjct: 150 HLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 209
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CK+ ++ A + EM +G + T LIH LC + ++ +A +M+ ++P+
Sbjct: 210 CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 269
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME--------LLDSRC 394
+ F + D K G A + ++M + R +E L+D C
Sbjct: 270 VIFSTVVDALCKEGKVMEAHDVVDMM--IKRGVEPNVVTYNALMDGHC 315
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 9/236 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS T LI Y + +E A++ FE +++ N + L+ LC GR
Sbjct: 337 PDVVSYST---LINGYCKIQRIEKAMYLFEEMCRKELIPN----TVTYSTLMHGLCHVGR 389
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A FH+ + + P Y ILL+ +++ + +A + N+ P++ Y
Sbjct: 390 LQDAIALFHEM--VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+++G CR ++ A L + +G+ PN Y +I+GL + G E S +
Sbjct: 448 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 507
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P TY + +G+ + + ++L+ M++RGF +T S G
Sbjct: 508 KGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L A L + + ++PDFVS + IL+ + ++ AI +
Sbjct: 384 LCHVGRLQDAIALFHEMVTRGQIPDFVS---YCILLDYLCKNRRLDEAIALLKAIEG--- 437
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
N D ++ I++D +C+ G ++AA + F + P V Y I++NG +
Sbjct: 438 -SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS--KGLHPNVWTYTIMINGLCQQGL 494
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +A + + EM+++ +PN TY + G+ R R I+L++EM G +
Sbjct: 495 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 554
Query: 185 VIDGLVEAGRFEEVSGMMERFL 206
+++ L + G + V ++ FL
Sbjct: 555 LVEMLSDDGLDQSVKQILSEFL 576
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
R L P P++ +T L+ K + M S G P+ T N F
Sbjct: 48 NRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHL 107
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL---------------------- 300
++ A ++ K+++ G+ P+ T++ L++ LC E K+
Sbjct: 108 QRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTY 167
Query: 301 -------------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
AI++ + M+ C D+ T +I LC+ + +A F +MI
Sbjct: 168 GTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH 227
Query: 348 RGLVPHYLTFKRLNDEFKK----RGMTALAQKLCN--VMSSVPRSMELLDSRCKD 396
+G+ P T+ L + +TAL ++ N +M +V ++D+ CK+
Sbjct: 228 QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 282
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 162/310 (52%), Gaps = 7/310 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A +++ L+ +L K GRV + + L P V +N ++G + + +A +
Sbjct: 252 AIVYQTLIHALXKVGRVNEVLK--LLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 309
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M TPN TYG L+ G CR+ +VD A L+ ++ PN +++NT+I+G V
Sbjct: 310 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVS 365
Query: 192 AGRFEEVSGMM-ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
GR +E +M E L GP + TY +L+ G CK G L A +++ M +G P+
Sbjct: 366 RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVI 425
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY F K G++E+A N+ +M G + + Y+ L+ LCK++K+ A+ + +M
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+GC D+ T LI LC++ KF+EA ++DM+ G++ + +T+ L F +RG
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545
Query: 371 ALAQKLCNVM 380
A KL N M
Sbjct: 546 QEALKLVNDM 555
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 162/341 (47%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + +T LI + G + +A E N + +K + + IL+D CK+GR
Sbjct: 387 PDIFTYNT---LILGLCKKGYLVSA---RELMNEMQ-IKGCEPNVITYTILIDRFCKEGR 439
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + + A YN L++ + + V+DA + +M + P++ T+
Sbjct: 440 LEEARNVLDEMS--GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ G C++ + + A+ L ++M EG+ N I YNT+I + G +E ++ L
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+TY L+K C+AG++E + + M+S+G P+ + N + G ++
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 617
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ R MI G TPD +TY+ L+ LCK + A+ + +++ G D T LI
Sbjct: 618 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ FD+A + G +P+ +T+ L F K G
Sbjct: 678 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 9/342 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +L+ R G V+ A N ++V LF L++ +GR+ A
Sbjct: 324 TYGVLMHGLCRMGKVDEARMLLNKVPNPNVV--------LFNTLINGYVSRGRLDEAKAV 375
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H+ L P + YN L+ G + + A EM+ + PNV+TY L++ +
Sbjct: 376 MHESM-LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 434
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R++ A ++ EM +G+ NA+ YN +I L + + ++ M P +
Sbjct: 435 CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 494
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T+ SL+ G CK E A + + M+ G + + TYN F + G +++A+ L
Sbjct: 495 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 554
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G D +TY+ L+K LC+ ++ + + ++M +G + + + +LI+ LCR
Sbjct: 555 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 614
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A DMI RGL P +T+ L + K G A L
Sbjct: 615 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 656
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK+G + +A E ++ + + P V Y IL++ + + +++A E
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQI--KGCEPNVITYTILIDRFCKEGRLEEARNVLDE 449
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + N V Y L+ C+ +V A+ + +M +G +P+ +N++I GL + +
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
FEE G+ + L+ +TY +L+ + + G ++ A K++ M+ RG TYN
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + G +E + L+ M+ G P+ ++ +IL+ LC+ + A++ ++M RG
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+ T LI+ LC+ + EA F+ + G+ P +T+ L K GM
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 684
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 169/404 (41%), Gaps = 49/404 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L E DSA LL D VP+ + T + + + R V +
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMG 282
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V F+ + LCK R+ A++ + L + + P Y +L++G
Sbjct: 283 CIPDVNTFNDA-------IHGLCKMLRIHEAAKLVDRM--LLRGFTPNSFTYGVLMHGLC 333
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE-MRKEGIEPNA 179
R V +A ++ PNVV + TL+ GY R+D A ++ E M G P+
Sbjct: 334 RMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDI 389
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YNT+I GL + G +M + P ++TYT L+ +CK G LE A +L
Sbjct: 390 FTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDE 449
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G + YN K KV+DA+N++ M G PD T++ L+ LCK +K
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509
Query: 300 -----------------------------------LDLAIQVSKEMKCRGCDIDLDTSTM 324
+ A+++ +M RGC +D T
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI LCR ++ A FEDM+ +GL P+ ++ L + + G
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 613
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 33/310 (10%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
SLF +++ + G A+ + + S PT R YN++L+ K +
Sbjct: 147 SLFILIMKHYGRAGLPGQATRLLLDMRGV-YSCEPTFRSYNVVLDVLLAGNCPKVVPNVF 205
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + ++P V T+G +++ C + VD A L+K+M + G PNAIVY T+I L +
Sbjct: 206 YEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKV 265
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR EV ++E L+ P + T+ + G CK + A+K++ M+ RGF P+ TY
Sbjct: 266 GRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTY 325
Query: 253 NYFFRYFSKFGKVEDAMNLYRK--------------------------------MIESGY 280
+ GKV++A L K M+ G
Sbjct: 326 GVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGC 385
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD TY+ L+ LCK+ L A ++ EM+ +GC+ ++ T T+LI C+ + +EA
Sbjct: 386 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 445
Query: 341 EFEDMIRRGL 350
++M +GL
Sbjct: 446 VLDEMSGKGL 455
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 9/266 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K ++ A + D PD TF LI + E A+ ++
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIF---TFNSLIFGLCKVNKFEEALGLYQDML 521
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ N + +L L Q +K ++ + LD YN L+
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI------TYNGLIKALC 575
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N++ + +M + + PN ++ L+ G CR + A+ +++M G+ P+ +
Sbjct: 576 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 635
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN++I+GL + GR +E + ++ V P +TY +L+ +CK G + A +L
Sbjct: 636 TYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 695
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ GF+P+ T+ F K G E
Sbjct: 696 VDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 126/331 (38%), Gaps = 50/331 (15%)
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+YF K S + R YN + F + N D+ W + K P + T T +
Sbjct: 21 QYFFKTPSFSISPSGFNRFYN---DTVFNNTNGLDSGTEWERLLKPFDLPELRTSLTRIT 77
Query: 153 GY--CRLRRVDRAIRLVKEM-----RKEGIEPNAIVYNTVIDGLVEAGRFEEV------- 198
Y C+L + + E+ ++G VY +ID L AG F+ +
Sbjct: 78 PYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQM 137
Query: 199 ------------------------SGMMERFLV-------CEPGPTMVTYTSLVKGYCKA 227
G R L+ CE PT +Y ++
Sbjct: 138 KQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCE--PTFRSYNVVLDVLLAG 195
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
+ + M+S+G P+ T+ + +V+ A L + M G P+ + Y
Sbjct: 196 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 255
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L+ L K +++ +++ +EM GC D++T IH LC+M + EA+ + M+
Sbjct: 256 QTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLL 315
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
RG P+ T+ L + G A+ L N
Sbjct: 316 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 346
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 155/309 (50%), Gaps = 1/309 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L ++GR + + Y + LDQ +P V YN +++ +++ + A +
Sbjct: 205 YNTVINGLLREGR-QLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVR 263
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K PN +T+ +L+ GYC + + AI + K M ++G+EP+ YNT++ L + GR
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P TY +L+ GY G L +L MM+ G P +N
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K GKV+DAM L+ KM G PD +TY I++ LC K+D A+ + G
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D LIH LC K+D+A +MI RG+ P+ + F L + K GM A A+
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAK 503
Query: 375 KLCNVMSSV 383
+ ++M V
Sbjct: 504 NIFDLMVRV 512
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 157/322 (48%), Gaps = 6/322 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI Y + G V+ A+ F + + + I++D+LC G+V A F
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRR----QGLNPDTVTYGIVMDALCMVGKVDDAMAQF 436
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ + + P V+ L++G AE +EM + PN + + TL+ C
Sbjct: 437 GRL--ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLC 494
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ V RA + M + ++ + I YNT+IDG G+ +E + ++E ++ P V
Sbjct: 495 KEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEV 554
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +++ GYCK G +E A + + M S+G P TY+ + + + A LY M
Sbjct: 555 TYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM 614
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I+SG D TY+I+L LC+ + D A+++ + + ++ T ++I L + +
Sbjct: 615 IKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRH 674
Query: 336 DEASAEFEDMIRRGLVPHYLTF 357
DEA F ++ RGLVP+ +T+
Sbjct: 675 DEAKDLFASLLARGLVPNVVTY 696
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 168/377 (44%), Gaps = 11/377 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KA+ D A +L+ + +P+ ++ ++ L+ Y +G AI F+
Sbjct: 244 IISALSKARAMDKAAVVLVRMVKNGAMPNRITHNS---LLHGYCSSGKPNDAIGVFK--- 297
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M ++ + + L+ LCK GR A + F + + P Y LL+G+
Sbjct: 298 --RMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSM--VKRGHKPNSATYGTLLHGY 353
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ M + + P+ + L+ Y + +VD A+ L +MR++G+ P+
Sbjct: 354 ATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDT 413
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y V+D L G+ ++ R + P V + +L+ G C + A ++
Sbjct: 414 VTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVE 473
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI RG P+ +N + K G V A N++ M+ D +TY+ L+ C K
Sbjct: 474 MIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGK 533
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D A ++ + M G + T +I+ C+ + ++A + F M +G+ P +T+
Sbjct: 534 VDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYST 593
Query: 360 LNDEFKKRGMTALAQKL 376
+ + TA A++L
Sbjct: 594 ILQGLFQARRTAAAKEL 610
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 42/286 (14%)
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVD-------RAIR------------------------ 165
+ V PN++TY +++ R+ +D R IR
Sbjct: 84 RPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTS 143
Query: 166 -----LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-----PTMV 215
++ M G PN Y ++ GL + R ++ ++ +V + P +V
Sbjct: 144 EAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVV 203
Query: 216 TYTSLVKGYCKAG-DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+Y +++ G + G L+ A + M+ +G P TYN SK ++ A + +
Sbjct: 204 SYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVR 263
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+++G P+R+T++ LL C K + AI V K M G + D+ T L+ LC+ +
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA F+ M++RG P+ T+ L + G L ++M
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 145/309 (46%), Gaps = 10/309 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L ++D A L ++ IG P+ + F L+ + GMV A F+
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNI---FFNTLLNHLCKEGMVARAKNIFDLMV 510
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+D+ ++ + + L+D C G+V A++ + LD P YN ++NG+
Sbjct: 511 RVDVQRDVIT----YNTLIDGYCLHGKVDEAAKLL-EGMVLD-GVKPNEVTYNTMINGYC 564
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ ++DA + +M + V P +VTY T+++G + RR A L M K GI+ +
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN ++ GL + ++ + + + + T+ ++ K G + A + +
Sbjct: 625 TYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASL 684
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKEDK 299
++RG +P+ TY + + G +E+ +L+ + ++G T + R+ ++ K+L K +
Sbjct: 685 LARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEV 744
Query: 300 LDLAIQVSK 308
+ +SK
Sbjct: 745 RKAGVYLSK 753
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 185/372 (49%), Gaps = 18/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L K ++F+ ++ + K+G +S D F + I+ +A AG ++ A+ FE
Sbjct: 236 MLHILGKTRQFEMMVAIIQEMGKVGA------LSMDAFKVAIKSFAAAGEIKNAVGVFEL 289
Query: 59 ANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
M KN FD G F LL +L +G + A + F K + ++P +R Y L+
Sbjct: 290 -----MKKNGFDDGVESFNCLLVALANEGLGREARQVFDK---MHGQYSPDLRSYTALML 341
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
W ++N+ +A R W EM ++ + P+VV + T++EG R +R A+++ + M+ +G P
Sbjct: 342 AWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPP 401
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N Y +I + G+ + E P + TYT L+ GY A ++ + +L
Sbjct: 402 NVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVL 461
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M +G P TYN + + +DA +Y+KMI+ G P TY++++K
Sbjct: 462 EEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLG 521
Query: 298 DK-LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
D+ + V +EM RG D+++ T+ I+ R + +EA E+MI +G+ +
Sbjct: 522 DRNYAMGCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQID 581
Query: 357 FKRLNDEFKKRG 368
+ + +F K G
Sbjct: 582 YNKFAADFSKAG 593
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++ + + A+ + + M+K G + +N ++ L G E + ++ + +
Sbjct: 271 IKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDK-MHGQY 329
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + +YT+L+ +C A +L A ++ M+ +G P +N + + +A+
Sbjct: 330 SPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALK 389
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ M G P+ TY +L++ CK K+D+A++ +EM+ C D+ T T L+
Sbjct: 390 MFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYG 449
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ D +A E+M ++G P T+ L R M A ++
Sbjct: 450 NAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARI 495
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 24/247 (9%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V +T + + R R A+ FE L K + +L+ CK+G+
Sbjct: 366 PDVVVHNTMIEGLLRGQRR---PEALKMFE----LMKAKGPPPNVWTYTMLIRDHCKRGK 418
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E F + +E P V Y LL G+ +K + EM ++ P+ TY
Sbjct: 419 MDMAMECFEEMQE--ARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTY 476
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--------FEEVS 199
L++ + D A R+ K+M K+G+EP YN ++ R +EE
Sbjct: 477 NALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEE-- 534
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
M R +C P + +YT + G+ + G E A K ++ MI++G YN F F
Sbjct: 535 --MHRRGIC---PDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADF 589
Query: 260 SKFGKVE 266
SK GK +
Sbjct: 590 SKAGKPD 596
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 6/334 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ G V+ A+ F + + A + ++ LCK GRV+ A YF
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQ----QGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++G + AE LEM + N + + ++++ +C
Sbjct: 430 EQM--IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L + M + G++PN I YNT+I+G AG+ +E ++ + P V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY++L+ GYCK +E A + K M S G P TYN + + + A LY ++
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK D A+Q+ + + ++ T ++I L ++ +
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
DEA F GLVP+Y T++ + + +G+
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 175/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQG+V A
Sbjct: 338 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA ++ +M E ++P + Y +L+
Sbjct: 392 LVFSKMRQ--QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C + +RA L+ EM GI N I +N++ID + GR E + E + P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY +L+ GYC AG ++ A K+L M+S G P+ TY+ + K ++EDA+ L+
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M SG +PD +TY+I+L+ L + + A ++ + G I+L T +++H LC+
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
D+A F+++ L TF + D K G A+ L SS
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 3/288 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERFW 132
+ ILL LC + R + A E H + D+ P V Y ++NG+F+ + A +
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + P+VVTY +++ C+ + +D+A+ ++ M K G+ P+ + YN+++ G +
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+ +E G +++ P +VTY+ L+ CK G A KI M RG P TTY
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ ++ G + + L M+ +G PD + IL+ K+ K+D A+ V +M+
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G + + T +I +LC+ + ++A FE MI GL P + + L
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 180/385 (46%), Gaps = 15/385 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++ D GG PD VS + +I + + G + A T+ + ++ + + +
Sbjct: 183 MMADDRGGGSPPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT----YN 235
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ +LCK + A E + + P YN +L+G+ S K+A F +MR
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V P+VVTY L++ C+ R A ++ M K G++P Y T++ G G
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E+ G+++ + P ++ L+ Y K G ++ A + M +G P+ TY
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G+VEDAM + +MI+ G +P + Y+ L+ LC +K + A ++ EM RG
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +I C+ + E+ FE M+R G+ P+ +T+ L + + G A KL
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 377 CNVMSSV---PRSM---ELLDSRCK 395
+ M SV P ++ L++ CK
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCK 558
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 151/337 (44%), Gaps = 37/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L C G+ K A + K + P V Y++L++ ++ +A + +
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRS--DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 135 MRKENVTPNVVTYGTLVEG-----------------------------------YCRLRR 159
M K + P + TYGTL++G Y + +
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
VD+A+ + +MR++G+ PNA+ Y VI L ++GR E+ E+ + P + Y S
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G C E A +++ M+ RG + +N K G+V ++ L+ M+ G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ +TY+ L+ C K+D A+++ M G + T + LI+ C++ + ++A
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M G+ P +T+ + + TA A++L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIR-------------------------------- 165
+ VTP++ TYG L+ CR R+D
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 166 ----LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYT 218
+++ M + G PN YN ++ GL + R +E ++ G P +V+YT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G+ K GD + A M+ RG LP TYN K ++ AM + M+++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY+ +L C + AI K+M+ G + D+ T ++L+ LC+ + EA
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 109/255 (42%), Gaps = 2/255 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ C G++ A + + P Y+ L+NG+ + ++DA + E
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSV--GLKPNTVTYSTLINGYCKISRMEDALVLFKE 571
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ M + + + T+ ++ K G + A + S G +P+ TY
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +E+ L+ M ++G T D + +++ L + ++ A + +
Sbjct: 692 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
Query: 315 CDIDLDTSTMLIHLL 329
++ T+++ I LL
Sbjct: 752 FSLEASTASLFIDLL 766
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 175/373 (46%), Gaps = 11/373 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K FD+ W + D + P+ V T+ LI R G A F+ +M
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVV---TYGTLIDGCCRQGDFLKAFRLFD-----EM 219
Query: 65 V-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K ++ IL+ LC + R+ A F R + P + YN +++G+ +
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMF--RTMRNSGMLPNLYTYNTMMDGYCKIA 277
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+VK A + EM + + PNVVT+G L++G C+ + A + + +M G+ PN VYN
Sbjct: 278 HVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYN 337
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+IDG +AG E + E P + TY+ L+KG C +E A +L+ M +
Sbjct: 338 CLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
GFLP+ TYN + K G +E A+ + +M E G P+ +T+ L+ CK K++ A
Sbjct: 398 GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAA 457
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ + EM +G D+ T LI + EA ++M GL P+ T L D
Sbjct: 458 MGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Query: 364 FKKRGMTALAQKL 376
K G + A KL
Sbjct: 518 LCKDGRISDAIKL 530
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 27/394 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE----------VPDFVSK--------DTFVILIRR 42
+I VL AK + A CL+ D I + V + +S+ + F +LI
Sbjct: 76 IIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIA 135
Query: 43 YARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD 102
++ G+VE A+W + + L ++ + ++LD L K+GR + + +
Sbjct: 136 FSEMGLVEEALWVYYKMDVLPAMQACN-------MVLDGLVKKGRFDTMWKVYGDM--VA 186
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ +P V Y L++G R + A R + EM ++ + P VV Y L+ G C R+
Sbjct: 187 RGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISE 246
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A + + MR G+ PN YNT++DG + ++ + + L P +VT+ L+
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CK ++ A K L M S G +P+ YN + K G + +A++L+ ++ + P
Sbjct: 307 GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP 366
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D TY IL+K LC D+++ A + +EMK +G + T LI C+ ++A
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
M +G+ P+ +TF L D + K G A L
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 13/274 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
M+ K A L + +G +P+ V TF ILI + MV A + + A
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVV---TFGILIDGLCKTDEMVSARKFLIDMA 325
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS-WAPTVRVYNILLNG 118
+ +V N ++ L+D CK G + SE E+++ P V Y+IL+ G
Sbjct: 326 S-FGVVPNI----FVYNCLIDGYCKAGNL---SEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+++A+ EM+K+ PN VTY TL++GYC+ +++AI + +M ++GIEPN
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I ++T+IDG +AG+ E G+ ++ P +V YT+L+ G+ K G+ + A ++ K
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
M G P+ T + K G++ DA+ L+
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 171/357 (47%), Gaps = 10/357 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+ TF I+ RYA AG A+ F + ++ S F +LD LCK RV+ A
Sbjct: 135 TPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQS----FNTILDVLCKSKRVEMA 190
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
F K + YN+++NGW K A EM K +TPN+ +Y T++
Sbjct: 191 YNLF---KVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTML 247
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GY R +++ A EM+K E + I Y TVI G AG + + + +
Sbjct: 248 KGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVL 307
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P++ TY + ++ CK +++ A I + M+ +G++P+ TYN R G++E AM
Sbjct: 308 PSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEF 367
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+M + G P+ TY+++++ C E ++D A+ + ++M C +LDT +LI +
Sbjct: 368 MGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFV 427
Query: 332 MYKFDE---ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
K D+ A +M+ RG VP TF R+ + G A+++ + S R
Sbjct: 428 RKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCGR 484
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 69/295 (23%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P T+ + E Y + RA+++ M + G + +NT++D L ++ R
Sbjct: 127 MRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKR 186
Query: 195 FE----------------------EVSG------------MMERFLVCEPGPTMVTYTSL 220
E V+G M++ + P + +Y ++
Sbjct: 187 VEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTM 246
Query: 221 VKGYCKA-----------------------------------GDLEGASKILKMMISRGF 245
+KGY +A G+++ A K+ M+ +G
Sbjct: 247 LKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGV 306
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
LPS TYN F + K V++A+ ++ +M+ GY P+ +TY+++++ LC +++ A++
Sbjct: 307 LPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAME 366
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
MK GC+ ++ T ++I C + D+A F+ M +P+ T+ L
Sbjct: 367 FMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNIL 421
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 186/380 (48%), Gaps = 11/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +LAKA++F++ +L +++G + ++ DTF I +R +A A + A+ FE
Sbjct: 146 MMIILAKARQFETMMSML-EEMGEKRL---LTLDTFSIAMRAFAAAKERKKAVGIFELMK 201
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + G LLDSL + K A F K L+ + P +R Y +LLNGW
Sbjct: 202 N----HKYRVGVETINALLDSLGRAKLGKEAQALFGK---LEGRFTPNLRTYTVLLNGWC 254
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R KN+ +A R W EM E P++VT+ ++EG R ++ AI+ + M+ +G P+
Sbjct: 255 RVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVR 314
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I L + + +E G + P YT L+ GY ++ ++LK M
Sbjct: 315 SYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEM 374
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P TYN + + +DA+ +Y+KMI++G P +Y++++K +
Sbjct: 375 KEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNY 434
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ V EM +G D ++ T+ I L + +EA E+MI +G+ L + +
Sbjct: 435 EMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKF 494
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+F + G + ++L M
Sbjct: 495 AADFSRAGKPDILEELAQKM 514
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 170/354 (48%), Gaps = 23/354 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI+ AG V A +E + V+ + LL+ LCK G + +
Sbjct: 383 TFSTLIQGLCNAGRVNQAWEVYE---RMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC 439
Query: 95 FHKRKELD----QSWA---------------PTVRVYNILLNGWFRSKNVKDAERFWLEM 135
F + E + SW PT+ YN L+ G +S V+DA M
Sbjct: 440 FEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFM 499
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ ++P+V+T+ ++++G C+ +R+ A + K + G PN + Y+T+IDGL + +
Sbjct: 500 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 559
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E ++ + + VTY+++V G K G +E A +L+ M G LP TYN
Sbjct: 560 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K ++ +A+ L R+M+E+G+ P +TY L LC+ + D A+++ M RGC
Sbjct: 620 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV-PHYLTFKRLNDEFKKRG 368
+ T + ++ LC+ + EA FE M R +V PH + + L D K G
Sbjct: 680 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 733
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 174/364 (47%), Gaps = 38/364 (10%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V+ D LI +AG ++ A+ L KN +G F LL LC+ R
Sbjct: 244 PNTVTYDA---LIDGLCKAGKLDIAL-------GLLRDKNSQAGMFAFSSLLHGLCQAHR 293
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + P V +N L+NG +++ V +A + M++ + +V+TY
Sbjct: 294 LEEAIQLLKA-----MPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
L++G C+LRR+ A R V+ MR+ EG PN + ++T+I GL AGR + + ER +
Sbjct: 349 NILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Query: 207 VCEP-GPTMVTYTSLVKGYCKAGDLEGASKILKMMISR---------------GFL---- 246
E P TY L++G CKAGD + + M+ R FL
Sbjct: 409 AVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV 468
Query: 247 --PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ TYN SK G V DA+ L MIESG +PD +T++ +L LCKE ++ A
Sbjct: 469 CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAH 528
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
V K RGC ++ T + LI L +M K DEA M+ G + +T+ + D
Sbjct: 529 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 588
Query: 365 KKRG 368
K G
Sbjct: 589 LKVG 592
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 142/265 (53%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YN+L+NG ++ V DA + + + P VVTY T+++G CR VD+ +L++EM
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
G PNA+ YNT+++ L+ GR +E ++ER P ++T+ ++KG CK G++E
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A +++ M+ RGF+P + + G+V++A +++++ G+TPD +TY+ ++
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
L K +L+ A V + + + T T+ + L + A F+ M + G+
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKL 376
P+ +T+ L D K G +A L
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIALGL 268
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 12/326 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI +AG V A F A F + ++D LC+ V +
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQF----GFRPTVVTYSTVIDGLCRDNEVDKGCKL 58
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + AP YN L+N K+A M P ++T+G +++G
Sbjct: 59 LEEMA--GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGL 116
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++ A R+V EM G P+ ++ ++ L E GR +E ++ L+ P
Sbjct: 117 CKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDA 176
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY ++V G KAG LE A +L+++ P+ T+ SK G + A +
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDS 236
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M ++G +P+ +TY L+ LCK KLD+A+ + ++ + + + L+H LC+ ++
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHR 293
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
+EA + M VP+ + F L
Sbjct: 294 LEEAIQLLKAM---PCVPNVVCFNSL 316
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 160/369 (43%), Gaps = 18/369 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L R+G + A+ ++ N A + ++D LCK GRV A Y
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN----AITYSSIVDGLCKAGRVTEALGY 705
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K D+ AP V Y+ L++G ++ + +A F M + P+VVT+ L+ G
Sbjct: 706 FEKMAR-DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C R+D + L M + G + + YN +I+ G F ++E
Sbjct: 765 CDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS----PTTYNYFFRYFSKFGKVEDAMN 270
VT+ ++K C G +I + + +P +YN + E A+
Sbjct: 825 VTHGIVIKALC------GNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALE 878
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L R M+ G +PD Y ++ L K ++A ++ +EM+ RG DL T T++I L
Sbjct: 879 LLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLS 938
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL---CNVMSSVPRSM 387
+ + A FE+M+R+ L P + + L D F K A KL + ++
Sbjct: 939 KAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYS 998
Query: 388 ELLDSRCKD 396
++DS CK+
Sbjct: 999 TMVDSLCKN 1007
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 174/390 (44%), Gaps = 12/390 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K + D A LL + E+ + T+ ++ + G +E A+
Sbjct: 549 LIDGLSKMAKMDEALQLLAKMV---ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 605
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + A + L+D K+ R++ A R+ L+ + P+V Y L +G
Sbjct: 606 DAGCLPD----AVTYNTLIDGFFKRQRLREAVGLL--REMLEAGFHPSVVTYTTLCHGLC 659
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNA 179
RS +A M PN +TY ++V+G C+ RV A+ ++M R E + P+
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y+ +IDGL +AGR +E +ER + P +VT++ L+ G C AG ++ ++
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M RG YN + G+ A L +M G + +T+ I++K LC D+
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D A+ + C ++ +T++ L+ + ++A M+ G P +
Sbjct: 840 IDEAVSYFHSIP-EDCRDEISYNTLITSLVAS-RRSEQALELLRAMVADGGSPDACNYMT 897
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ D K G +A KL M S S +L
Sbjct: 898 VMDGLFKAGSPEVAAKLLQEMRSRGHSPDL 927
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 185/461 (40%), Gaps = 108/461 (23%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA + D A LL DK + F S L+ +A +E AI +
Sbjct: 252 LIDGLCKAGKLDIALGLLRDKNSQAGMFAFSS------LLHGLCQAHRLEEAIQLLKAMP 305
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V F+S L++ LC+ RV A E F KE + V YNILL G
Sbjct: 306 CVPNVVCFNS-------LMNGLCQARRVDEAFELFDVMKE--SGCSADVITYNILLKGLC 356
Query: 121 RSKNVKDAERFWLEMRK-ENVTPNVVTYGTLV---------------------------- 151
+ + + +A R MR+ E +PNVVT+ TL+
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416
Query: 152 --------EGYCRL---RRVDRAIR--LVKEMRKEG----------------IEPNAIVY 182
EG C+ RR+++ L +E R P + Y
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTY 476
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
NT++ GL ++G + G++E + P ++T+ S++ G CK + A + K +
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
RG P+ TY+ SK K+++A+ L KM+E G + +TY ++ L K +++
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596
Query: 303 AIQVSKEMKCRGCDID-----------------------------------LDTSTMLIH 327
A+ V ++M+ GC D + T T L H
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 656
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LCR +FDEA + M RG P+ +T+ + D K G
Sbjct: 657 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 697
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 14/345 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA D A+ L I +PD V TF ILI AG ++ + F
Sbjct: 725 LIDGLCKAGRIDEAYEFLERMIRAGRIPDVV---TFSILINGLCDAGRIDTGLELFCGMA 781
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + ++++ C +G AA + K A + I++
Sbjct: 782 E----RGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKT--HGIAKNTVTHGIVIKALC 835
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A ++ + ++ + ++Y TL+ RR ++A+ L++ M +G P+A
Sbjct: 836 GNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDAC 893
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TV+DGL +AG E + +++ P + TYT ++ G KA L A + M
Sbjct: 894 NYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEM 953
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ + P Y+ F K KV+DA L R SG P Y ++ LCK
Sbjct: 954 LRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGT 1010
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
D A++V +EMK + C+ + T L + DEA D+
Sbjct: 1011 DKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH PD T+ I+I ++A + A FE +M+ KN A ++ L+D+
Sbjct: 922 GHS-PDL---RTYTIMISGLSKAKQLPLACDYFE-----EMLRKNLKPDAIVYSSLIDAF 972
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK +V A + PT+ +Y+ +++ +++ A EM+ +N P
Sbjct: 973 CKADKVDDAWKLLRS-----SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEP 1027
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+ + +L Y RVD A++LV +++
Sbjct: 1028 GIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 151/278 (54%), Gaps = 4/278 (1%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
LD + P V ++NIL++G+ + +V +A + E+ + + P+VV++ TL+ GYCR + V
Sbjct: 218 LDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNV 277
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYT 218
+ L M E I P+ Y+ +I+GL + R EE +G+ + +CE G P VT+T
Sbjct: 278 EEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDE--MCEMGLVPNGVTFT 335
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ G CK G ++ A + ++M RG P TYN + G +++A L +MI +
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G+ PD++T+ L+ CK+ +D A+++ M G ++D T LI LCR + +A
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+DM+ G P T+ + D F K+G + KL
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKL 493
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 179/379 (47%), Gaps = 18/379 (4%)
Query: 30 FVSKDTFVI-------LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
V K+ F I L+RR + W F + LD + LF IL+
Sbjct: 180 LVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEF-YLEVLDY--GYPPNVYLFNILMHGF 236
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G V A F + + P+V +N L++G+ RSKNV++ M E ++P
Sbjct: 237 CKIGDVMNARMVFDEISR--RGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISP 294
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V TY L+ G C+ RV+ A L EM + G+ PN + + T+IDG + G+ +
Sbjct: 295 DVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNF 354
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E P ++TY +L+ G C+ GDL+ A K+L MI GF P T+ K
Sbjct: 355 EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKD 414
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G ++ A+ + +M+E G D + + L+ LC++ ++ A ++ K+M G D T
Sbjct: 415 GDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTY 474
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
TM+I C+ + ++M R G VP +T+ L + F K+G A+ L + M +
Sbjct: 475 TMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLN 534
Query: 383 ---VPRSME---LLDSRCK 395
VP + LLD CK
Sbjct: 535 MEVVPNDITFNILLDGHCK 553
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + VE A F+ + +V N F L+D CK G++ A
Sbjct: 298 TYSALINGLCKESRVEEANGLFDEMCEMGLVPN----GVTFTTLIDGQCKHGKIDLALRN 353
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K D+ P + YN L+NG R ++K+A + EM P+ +T+ TL++G
Sbjct: 354 FEIMK--DRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGC 411
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-------- 206
C+ +D A+ + M +EGIE + + + +I GL GR + M++ L
Sbjct: 412 CKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDD 471
Query: 207 ---------VCEPG------------------PTMVTYTSLVKGYCKAGDLEGASKILKM 239
C+ G P +VTY +L+ G+CK G ++ A +L
Sbjct: 472 PTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHA 531
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVED 267
M++ +P+ T+N K G D
Sbjct: 532 MLNMEVVPNDITFNILLDGHCKHGSSVD 559
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 205/442 (46%), Gaps = 62/442 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KAK D A L++ + P+ + F+ +G +EA+ EFA+
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI--------SGYIEAS----EFAS 540
Query: 61 NLDMVKNFDS-----GASLFEILLDSLCKQGRV-KAASEYFHKRKELDQSWAPTVRVYNI 114
VK L L++ CK+G+V +A S Y R +DQ + Y +
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY---RSMVDQGILGDAKTYTV 597
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+NG F++ V DAE + EMR + + P+V +YG L+ G+ +L + +A + EM +EG
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ PN I+YN ++ G +G E+ +++ V P VTY +++ GYCK+GDL A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 235 KILKMMISRGFLP----------------------------------SPTTYNYFFRYFS 260
++ M +G +P S +N +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 261 KFGKVEDAMNLYRKMIESGY----TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
KFGK E + ++++ + P+ +TY+I++ LCKE L+ A ++ +M+
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T T L++ +M + E F++ I G+ P ++ + + + F K GMT A L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 377 CNVM---SSVPRSMELLDSRCK 395
+ M ++V +L S C+
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCR 919
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 2/310 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L++ C++ V+ E + K+ + +P Y ++ G S ++ A
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNI 439
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM PNVV Y TL++ + + R A+R++KEM+++GI P+ YN++I GL +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A R +E + + P TY + + GY +A + A K +K M G LP+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K GKV +A + YR M++ G D TY +L+ L K DK+D A ++ +EM+
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ + +LI+ ++ +AS+ F++M+ GL P+ + + L F + G
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 372 LAQKLCNVMS 381
A++L + MS
Sbjct: 680 KAKELLDEMS 689
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 10/328 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++ +C G + A ++ KE+ S P V +Y L+ + ++ DA R
Sbjct: 420 YGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM+++ + P++ Y +L+ G + +R+D A + EM + G++PNA Y I G +EA
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F ++ C P V T L+ YCK G + A + M+ +G L TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K KV+DA ++R+M G PD +Y +L+ K + A + EM
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ ML+ CR + ++A ++M +GL P+ +T+ + D + K G A A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 374 QKLCNVM---SSVPRSM---ELLDSRCK 395
+L + M VP S L+D C+
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 53/336 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ K G ++ AS F + E + P V +YN+LL G+ RS ++ A+ E
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PN VTY T+++GYC+ + A RL EM+ +G+ P++ VY T++DG
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 195 FEE------------------------------------------VSGMMERFLVCEPGP 212
E + G +RF P
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF----GKP 803
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VTY ++ CK G+LE A ++ M + +P+ TY + K G+ + ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-----GCDIDLDTSTMLIH 327
+ I +G PD + Y +++ KE A+ + +M + GC + + T L+
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ + + A E+M+R +P T L +E
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 6/299 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ P Y++L++G + K ++DA+ +EM V+ + TY L++G + R D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A LV EM GI +Y+ I + + G E+ + + + P Y SL++
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
GYC+ ++ ++L M R + SP TY + G ++ A N+ ++MI SG P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ + Y L+K + + A++V KEMK +G D+ LI L + + DEA +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCK 395
+M+ GL P+ T+ + + A A K C V+ + L++ CK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 140/370 (37%), Gaps = 89/370 (24%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A + + G PD S + +LI +++ G ++ A F+ +M
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFS---YGVLINGFSKLGNMQKASSIFD-----EM 653
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
V+ ++ +LL C+ G ++ A E + + P Y +++G+ +S
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV--KGLHPNAVTYCTIIDGYCKSG 711
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV---------------- 167
++ +A R + EM+ + + P+ Y TLV+G CRL V+RAI +
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 168 ----------KEMRKEGI------------EPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
E++ E + +PN + YN +ID L + G E + +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY----NYFFRY--- 258
PT++TYTSL+ GY K G + I+ G P Y N F +
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 259 ---------------------------------FSKFGKVEDAMNLYRKMIESGYTPDRL 285
F+K G++E A + M+ Y PD
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Query: 286 TYHILLKILC 295
T L+ C
Sbjct: 952 TVIELINESC 961
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 29/241 (12%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVSG 200
V +G L +GY ++ A+ + + P ++D L+ R ++ G
Sbjct: 152 VLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLE---------------------GASKILKM 239
M+ER +V + + TY L+ +C+AG+++ GA K+ +
Sbjct: 212 MVERNVVFD----VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G +P TY+ K ++EDA +L +M G + D TY +L+ L K
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A + EM G +I I ++ + ++A A F+ MI GL+P +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 360 L 360
L
Sbjct: 388 L 388
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 170/330 (51%), Gaps = 10/330 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + T+ LI + AG + A F N + + KN + + IL+D+LCK+G+
Sbjct: 305 PDVI---TYSTLICGFCLAGQLMGA---FSLLNEMTL-KNINPDVYTYTILIDALCKEGK 357
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+K A + + P V Y+ L++G+ V +A++ + M + V P+V +Y
Sbjct: 358 LKEAKNLLGVMTK--EGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ G C+ + VD A+ L++EM + + PN + YN++IDGL ++GR +M+
Sbjct: 416 NIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHH 475
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
++TYTSL+ G CK +L+ A + M RG P+ TY K ++++
Sbjct: 476 RGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKN 535
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L++ ++ G D TY++++ LCKE LD A+ + +M+ GC D T ++I
Sbjct: 536 AQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIR 595
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L + D+A +MI +GL+ H+ F
Sbjct: 596 SLFEKDENDKAEKLLHEMIAKGLL-HFRNF 624
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 181/409 (44%), Gaps = 48/409 (11%)
Query: 5 LAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
L K K F +A L ++ G E PD V T ILI + G + F F+
Sbjct: 142 LVKMKHFPTAISLSKQMEVKGIE-PDLV---TLSILINCFCHLGQM-----AFSFSVLGK 192
Query: 64 MVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
++K + + L+ LC +G VK S +FH K + Q + Y LLNG +
Sbjct: 193 ILKLGYQPNTIILTTLMKGLCLKGEVKK-SLHFHD-KVVAQGFQMNQVSYGTLLNGLCKI 250
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ A + + + P+VV Y T+++G C+ + V+ A EM GI P+ I Y
Sbjct: 251 GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITY 310
Query: 183 NTVIDGLVEAGRFEEVSGMMERFL-----------------VCEPG-------------- 211
+T+I G AG+ ++ +C+ G
Sbjct: 311 STLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTK 370
Query: 212 ----PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY++L+ GYC G++ A +I M+ PS +YN K V++
Sbjct: 371 EGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDE 430
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AMNL R+M+ P+ +TY+ L+ LCK ++ A+ + KE+ RG D+ T T L+
Sbjct: 431 AMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLD 490
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ D+A A F M RG+ P+ T+ L D K AQKL
Sbjct: 491 GLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 39/349 (11%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ + F + LL+ LCK G + A + R D+S P V +YN +++G + K
Sbjct: 229 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKLL--RMIEDRSTRPDVVMYNTIIDGLCKDK 286
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR------------ 171
V +A F+ EM + P+V+TY TL+ G+C ++ A L+ EM
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346
Query: 172 -----------------------KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
KEG++PN + Y+T++DG G + +
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
E P++ +Y ++ G CK ++ A +L+ M+ + +P+ TYN K G++ A
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSA 466
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
++L +++ G D +TY LL LCK LD AI + +MK RG + T T LI
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT--ALAQK 375
LC+ + A F+ ++ +G T+ + K GM ALA K
Sbjct: 527 LCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMK 575
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 141/285 (49%), Gaps = 4/285 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+ C G++ A F E+ ++ P V Y IL++ + +K+A+
Sbjct: 310 YSTLICGFCLAGQLMGA---FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG 366
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M KE V PNVVTY TL++GYC + V A ++ M + + P+ YN +I+GL +
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGK 426
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+E ++ L P VTY SL+ G CK+G + A ++K + RG TY
Sbjct: 427 SVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K ++ A+ L+ KM E G P++ TY L+ LCK +L A ++ + + +
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK 546
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
GC ID+ T ++I LC+ DEA A M G +P +TF+
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFE 591
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 16/342 (4%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + IL++ C G++ A + K L + P + L+ G
Sbjct: 160 VKGIEPDLVTLSILINCFCHLGQM--AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGE 217
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
VK + F ++ + N V+YGTL+ G C++ AI+L++ + P+ ++YNT
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277
Query: 185 VIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+IDGL + E + M R + P ++TY++L+ G+C AG L GA +L M
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIF----PDVITYSTLICGFCLAGQLMGAFSLLNEM 333
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P TY K GK+++A NL M + G P+ +TY L+ C ++
Sbjct: 334 TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A Q+ M + + + ++I+ LC+ DEA +M+ + +VP+ +T+ L
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453
Query: 361 NDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRCKD 396
D K G A L + + V LLD CK+
Sbjct: 454 IDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P++ + +L + K+ A +M + + P++VT L+ +C L ++ +
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G +PN I+ T++ GL G ++ ++ + V+Y +L+ G C
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+ A K+L+M+ R P YN K V +A + Y +M G PD +
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ C +L A + EM + + D+ T T+LI LC+ K EA M
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ G+ P+ +T+ L D + G A+++ + M
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM 403
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V DA + M TP+++ +G ++ +++ AI L K+M +GIEP+ + +
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+ G+ ++ + L P + T+L+KG C G+++ + ++++G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
F + +Y K G+ A+ L R + + PD + Y+ ++ LCK+ ++ A
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
EM RG D+ T + LI C + A + +M + + P T+ L D
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352
Query: 365 KKRGMTALAQKLCNVMS 381
K G A+ L VM+
Sbjct: 353 CKEGKLKEAKNLLGVMT 369
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 26/209 (12%)
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+GI PN + + +I+ L G+ ++ + L P +T T+L+KG +
Sbjct: 5 KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRC----- 59
Query: 233 ASKILKMMISRGFLP-------------------SPTTYNYFFRYF--SKFGKVEDAMNL 271
A K+ +M+ R P T+ ++F S V DA++
Sbjct: 60 AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ M+ TP + + +L L K AI +SK+M+ +G + DL T ++LI+ C
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + + + +++ G P+ + L
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTL 208
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 190/372 (51%), Gaps = 16/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L AK ++ L + + + VP+ V TF +L+R + R GMVE AI + +
Sbjct: 248 VLKGLCAAKRWEDVEVLFCEMVENNCVPNEV---TFDMLVRFFCRGGMVERAIEVLDRMS 304
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +L I+++S+CKQGRV A E+ + +P Y +L G
Sbjct: 305 EHGCTAN----TTLCNIVINSICKQGRVDDAFEFLNNMGSY--GCSPDTISYTTVLKGLC 358
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ +DA+ EM ++N PN VT+ T + C+ +D+AI L+++M + G +
Sbjct: 359 RAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIV 418
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN +++G GR V +E F L CEP +TYT+L+ G C A L+ A+++L
Sbjct: 419 TYNALVNGFCVQGR---VDSALELFNSLPCEP--NTITYTTLLTGLCHAERLDAAAELLA 473
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ + T+N +F + G VE+A+ L ++M+E G TP+ +T++ LL + ++
Sbjct: 474 EMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDC 533
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A+++ + +G +D T + ++ +L R + +EA F + G+ P + +
Sbjct: 534 NSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYN 593
Query: 359 RLNDEFKKRGMT 370
++ KR T
Sbjct: 594 KILSALCKRCET 605
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 169/381 (44%), Gaps = 13/381 (3%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
+ + D+A L + G V F + L+ Y R G ++AA L
Sbjct: 83 RGRTSDAARVLRTAEGSGAPVDVF----AYNTLVAGYCRYGRLDAA-------RRLIASM 131
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
A + L+ LC +GRV A L + P+V Y +LL +S
Sbjct: 132 PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDM--LRRECQPSVVTYTVLLEAVCKSSGFG 189
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + EMR + TPN+VTY ++ G CR RVD A +++ + G +P+ + Y TV+
Sbjct: 190 QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
GL A R+E+V + + P VT+ LV+ +C+ G +E A ++L M G
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCT 309
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
+ T N K G+V+DA M G +PD ++Y +LK LC+ + + A ++
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKEL 369
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM + C + T I +LC+ D+A E M G +T+ L + F
Sbjct: 370 LNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCV 429
Query: 367 RGMTALAQKLCNVMSSVPRSM 387
+G A +L N + P ++
Sbjct: 430 QGRVDSALELFNSLPCEPNTI 450
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 149/324 (45%), Gaps = 17/324 (5%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLCKQGRVKAASEY 94
LIR R G A A SGA + + L+ C+ GR+ AA
Sbjct: 76 LIRNLCRRGRTSDAARVLRTAEG--------SGAPVDVFAYNTLVAGYCRYGRLDAA--- 124
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+R P Y L+ G V DA +M + P+VVTY L+E
Sbjct: 125 --RRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAV 182
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +A++++ EMR +G PN + YN +I+G+ R ++ ++ R P
Sbjct: 183 CKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDT 242
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+YT+++KG C A E + M+ +P+ T++ R+F + G VE A+ + +
Sbjct: 243 VSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDR 302
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M E G T + +I++ +CK+ ++D A + M GC D + T ++ LCR +
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK 358
+++A +M+R+ P+ +TF
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFN 386
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 149/306 (48%), Gaps = 5/306 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ +C++ RV A + ++ + P Y +L G +K +D E + E
Sbjct: 210 YNVIINGMCREDRVDDARQILNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCE 267
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N PN VT+ LV +CR V+RAI ++ M + G N + N VI+ + + GR
Sbjct: 268 MVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGR 327
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + P ++YT+++KG C+AG E A ++L M+ + P+ T+N
Sbjct: 328 VDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNT 387
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G ++ A+ L +M E G + +TY+ L+ C + ++D A+++ + C
Sbjct: 388 FICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEP 447
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
I T T L+ LC + D A+ +M++ + +TF L F ++G A
Sbjct: 448 NTI---TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAI 504
Query: 375 KLCNVM 380
+L M
Sbjct: 505 ELVQQM 510
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 144/304 (47%), Gaps = 7/304 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ +LC++GR A+ + + S AP V YN L+ G+ R + A R M
Sbjct: 76 LIRNLCRRGRTSDAARVL---RTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM- 131
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
V P+ TY L+ G C RV A+ L+ +M + +P+ + Y +++ + ++ F
Sbjct: 132 --PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFG 189
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ +++ P +VTY ++ G C+ ++ A +IL + S GF P +Y
Sbjct: 190 QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ + ED L+ +M+E+ P+ +T+ +L++ C+ ++ AI+V M GC
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCT 309
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ ++I+ +C+ + D+A +M G P +++ + + G A++L
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKEL 369
Query: 377 CNVM 380
N M
Sbjct: 370 LNEM 373
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ +A R P+V L+ CR R A R+++ G + YN
Sbjct: 50 DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYN 109
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T++ G GR + ++ V P TYT L++G C G + A +L M+ R
Sbjct: 110 TLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRR 166
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
PS TY K AM + +M G TP+ +TY++++ +C+ED++D A
Sbjct: 167 ECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA 226
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ + G D + T ++ LC ++++ F +M+ VP+ +TF L
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286
Query: 364 FKKRGMTALAQKLCNVMS 381
F + GM A ++ + MS
Sbjct: 287 FCRGGMVERAIEVLDRMS 304
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
D L EA R ++ER P + T L++ C+ G A+++L+ G
Sbjct: 49 DDLAEAAR------LVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAP 102
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
YN + ++G+++ A L M PD TY L++ LC ++ A+ +
Sbjct: 103 VDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSL 159
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+M R C + T T+L+ +C+ F +A ++M +G P+ +T+ + + +
Sbjct: 160 LDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR 219
Query: 367 RGMTALAQKLCNVMSS 382
A+++ N +SS
Sbjct: 220 EDRVDDARQILNRLSS 235
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D L ++ R++ A + FH + D P +YN +L+ + A F+
Sbjct: 557 YSSIVDVLSREDRIEEAVQMFHAVQ--DMGMRPKAVMYNKILSALCKRCETDRAIDFFAH 614
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
M + PN TY L+EG R + A ++ E+ G+ +++
Sbjct: 615 MVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLI 661
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 182/356 (51%), Gaps = 16/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ D++ P V+ T +I+IR+Y V AI TF
Sbjct: 167 MISILGKMRKFDTAWTLI-DEMRKFS-PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYK 224
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + G F+ LL +LC+ V A K+ + + +NI+LNGW
Sbjct: 225 RFKL----EMGIDDFQSLLSALCRYKNVSDAGHLIFCNKD---KYPFDAKSFNIVLNGWC 277
Query: 121 RS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++AER W+EM V +VV+Y +++ Y + +++ ++L M+KE IEP+
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
VYN V+ L +A E +M + + E G P +VTY SL+K CKA E A ++
Sbjct: 338 KVYNAVVHALAKASFVSEARNLM-KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TY+ F R + G E+ L KM + G P TY +L++ LC+
Sbjct: 397 DEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
D + + EMK + DL + ++IH L K +EA +++M +G+ P+
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRR 159
Q + +VR Y+ +++ + + A EMRK +P++V TL + YC +
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHD 212
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP---TMVT 216
V +AI ++ +E + +++ L R++ VS + C +
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALC---RYKNVSDA-GHLIFCNKDKYPFDAKS 268
Query: 217 YTSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ ++ G+C G A ++ M + G +Y+ +SK G + + L+ +M
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTMLIHLLCRMYK 334
+ PDR Y+ ++ L K + A + K M+ +G + ++ T LI LC+ K
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 335 FDEASAEFEDMIRRGLVPHYLTF 357
+EA F++M+ +GL P T+
Sbjct: 389 TEEAKQVFDEMLEKGLFPTIRTY 411
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV Y +L+ R ++ + W EM+++ V P++ +Y ++ G +++ A
Sbjct: 438 PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGY 497
Query: 167 VKEMRKEGIEPNAIVYNTV 185
KEM+ +G+ PN V + +
Sbjct: 498 YKEMKDKGMRPNENVEDMI 516
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 205/442 (46%), Gaps = 62/442 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KAK D A L++ + P+ + F+ +G +EA+ EFA+
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI--------SGYIEAS----EFAS 540
Query: 61 NLDMVKNFDS-----GASLFEILLDSLCKQGRV-KAASEYFHKRKELDQSWAPTVRVYNI 114
VK L L++ CK+G+V +A S Y R +DQ + Y +
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY---RSMVDQGILGDAKTYTV 597
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+NG F++ V DAE + EMR + + P+V +YG L+ G+ +L + +A + EM +EG
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ PN I+YN ++ G +G E+ +++ V P VTY +++ GYCK+GDL A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 235 KILKMMISRGFLP----------------------------------SPTTYNYFFRYFS 260
++ M +G +P S +N +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 261 KFGKVEDAMNLYRKMIESGY----TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
KFGK E + ++++ + P+ +TY+I++ LCKE L+ A ++ +M+
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T T L++ +M + E F++ I G+ P ++ + + + F K GMT A L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 377 CNVM---SSVPRSMELLDSRCK 395
+ M ++V +L S C+
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCR 919
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 2/310 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L++ C++ V+ E + K+ + +P Y ++ G S ++ A
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNI 439
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM PNVV Y TL++ + + R A+R++KEM+++GI P+ YN++I GL +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A R +E + + P TY + + GY +A + A K +K M G LP+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K GKV +A + YR M++ G D TY +L+ L K DK+D A ++ +EM+
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ + +LI+ ++ +AS+ F++M+ GL P+ + + L F + G
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 372 LAQKLCNVMS 381
A++L + MS
Sbjct: 680 KAKELLDEMS 689
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 10/328 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++ +C G + A ++ KE+ S P V +Y L+ + ++ DA R
Sbjct: 420 YGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM+++ + P++ Y +L+ G + +R+D A + EM + G++PNA Y I G +EA
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F ++ C P V T L+ YCK G + A + M+ +G L TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K KV+DA ++R+M G PD +Y +L+ K + A + EM
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ ML+ CR + ++A ++M +GL P+ +T+ + D + K G A A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 374 QKLCNVM---SSVPRSM---ELLDSRCK 395
+L + M VP S L+D C+
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 53/336 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ K G ++ AS F + E + P V +YN+LL G+ RS ++ A+ E
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PN VTY T+++GYC+ + A RL EM+ +G+ P++ VY T++DG
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 195 FEE------------------------------------------VSGMMERFLVCEPGP 212
E + G +RF P
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF----GKP 803
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VTY ++ CK G+LE A ++ M + +P+ TY + K G+ + ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-----GCDIDLDTSTMLIH 327
+ I +G PD + Y +++ KE A+ + +M + GC + + T L+
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ + + A E+M+R +P T L +E
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 6/299 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ P Y++L++G + K ++DA+ +EM V+ + TY L++G + R D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A LV EM GI +Y+ I + + G E+ + + + P Y SL++
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
GYC+ ++ ++L M R + SP TY + G ++ A N+ ++MI SG P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ + Y L+K + + A++V KEMK +G D+ LI L + + DEA +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCK 395
+M+ GL P+ T+ + + A A K C V+ + L++ CK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 140/370 (37%), Gaps = 89/370 (24%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A + + G PD S + +LI +++ G ++ A F+ +M
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFS---YGVLINGFSKLGNMQKASSIFD-----EM 653
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
V+ ++ +LL C+ G ++ A E + + P Y +++G+ +S
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV--KGLHPNAVTYCTIIDGYCKSG 711
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV---------------- 167
++ +A R + EM+ + + P+ Y TLV+G CRL V+RAI +
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 168 ----------KEMRKEGI------------EPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
E++ E + +PN + YN +ID L + G E + +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY----NYFFRY--- 258
PT++TYTSL+ GY K G + I+ G P Y N F +
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 259 ---------------------------------FSKFGKVEDAMNLYRKMIESGYTPDRL 285
F+K G++E A + M+ Y PD
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Query: 286 TYHILLKILC 295
T L+ C
Sbjct: 952 TVIELINESC 961
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 29/241 (12%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVSG 200
V +G L +GY ++ A+ + + P ++D L+ R ++ G
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLE---------------------GASKILKM 239
M+ER +V + + TY L+ +C+AG+++ GA K+ +
Sbjct: 212 MVERNVVFD----VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G +P TY+ K ++EDA +L +M G + D TY +L+ L K
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A + EM G +I I ++ + ++A A F+ MI GL+P +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 360 L 360
L
Sbjct: 388 L 388
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 8/349 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G A+ F F E LL + + V+ +
Sbjct: 179 FDALISAYVDSGFTPDAVQCFRLVTK----NKFPVPIRGCENLLRRVVRLRPVEIERSWA 234
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ LD + P + +N+L++G+ ++ +V +A + E+ K + P VV++ TL+ G C
Sbjct: 235 LYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCC 294
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PT 213
+ V+ RL M EG+ P+ ++ +I+GL + GR +E S + + +C G P
Sbjct: 295 KSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDE--MCGRGLVPN 352
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VT+T+L+ G CK G ++ A K +MM+++G P TYN K G +++A L
Sbjct: 353 GVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 412
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M SG PD++T+ L+ CK+ ++ A+++ + M G ++D T LI LCR
Sbjct: 413 EMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREG 472
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ +A DM+ G P T+ + D F K+G + KL M S
Sbjct: 473 RVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 169/360 (46%), Gaps = 11/360 (3%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
E + +W L L+ + P F +L+ + +AG V A F+ +
Sbjct: 228 EIERSWALYLEVLDSGYPPKIY---FFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVV 284
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDA 128
S F L+ CK G V+ E F + ++ + P V ++ L+NG + + +
Sbjct: 285 S----FNTLISGCCKSGDVE---EGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEG 337
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ EM + PN VT+ TL++G C+ +VD A++ + M +G+ P+ + YN +I+G
Sbjct: 338 SLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALING 397
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + G +E ++ P +T+T+L+ G CK GD+E A +I + M+ G
Sbjct: 398 LCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELD 457
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
+ + G+V DA + M+ +G+ PD TY +++ CK+ + + ++ K
Sbjct: 458 DVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLK 517
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EM+ G + T L++ LC+ + A + M+ G+ P+ +T+ L D K G
Sbjct: 518 EMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 129/300 (43%), Gaps = 44/300 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G ++ F+ +V N F L+D CK G+V A +
Sbjct: 320 TFSALINGLCKEGRLDEGSLLFDEMCGRGLVPN----GVTFTTLIDGQCKGGKVDLALKN 375
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + L Q P + YN L+NG + ++K+A R EM + P+ +T+ TL++G
Sbjct: 376 F--QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC 433
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-------- 206
C+ ++ A+ + + M +EGIE + + + +I GL GR + M+ L
Sbjct: 434 CKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493
Query: 207 ---------VCEPG------------------PTMVTYTSLVKGYCKAGDLEGASKILKM 239
C+ G P +VTY +L+ G CK G ++ A +L
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++ G P+ TYN SK G D ++++ E G D +Y L+ K K
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNS--EKGLVTDYASYTALVNESSKTSK 610
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWT----F 56
+I L K + A L+ + PD K TF LI + G +E+A+
Sbjct: 394 LINGLCKVGDLKEARRLVNEMTASGLKPD---KITFTTLIDGCCKDGDMESALEIKRRMV 450
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E LD V F L+ LC++GRV A L + P Y +++
Sbjct: 451 EEGIELDDVA--------FTALISGLCREGRVHDAGRML--TDMLSAGFKPDDPTYTMVI 500
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + + +VK + EM+ + P VVTY L+ G C+ ++ A L+ M G+
Sbjct: 501 DCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVA 560
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGM-MERFLVCEPGPTMVTYTSLVK 222
PN I YN ++DG + G +V E+ LV + +YT+LV
Sbjct: 561 PNDITYNILLDGHSKHGSSVDVDIFNSEKGLVTD----YASYTALVN 603
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 181/356 (50%), Gaps = 16/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ D++ P V+ T +I+IR+Y V AI TF
Sbjct: 127 MISILGKMRKFDTAWTLI-DEMRKFS-PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYK 184
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ D F+ LL +LC+ V A K+ + + +NI+LNGW
Sbjct: 185 RFKLEMGIDD----FQSLLSALCRYKNVSDAGHLIFCNKD---KYPFDAKSFNIVLNGWC 237
Query: 121 RS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++AER W+EM V +VV+Y +++ Y + +++ ++L M+KE IEP+
Sbjct: 238 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 297
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
VYN V+ L +A E +M + + E G P +VTY SL+K CKA E A ++
Sbjct: 298 KVYNAVVHALAKASFVSEARNLM-KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 356
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TY+ F R + G E+ L KM + G P TY +L++ LC+
Sbjct: 357 DEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 413
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
D + + EMK + DL + ++IH L K +EA +++M +G+ P+
Sbjct: 414 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 469
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRR 159
Q + +VR Y+ +++ + + A EMRK +P++V TL + YC +
Sbjct: 115 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHD 172
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP---TMVT 216
V +AI ++ +E + +++ L R++ VS + C +
Sbjct: 173 VGKAINTFHAYKRFKLEMGIDDFQSLLSALC---RYKNVSDA-GHLIFCNKDKYPFDAKS 228
Query: 217 YTSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ ++ G+C G A ++ M + G +Y+ +SK G + + L+ +M
Sbjct: 229 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 288
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTMLIHLLCRMYK 334
+ PDR Y+ ++ L K + A + K M+ +G + ++ T LI LC+ K
Sbjct: 289 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 348
Query: 335 FDEASAEFEDMIRRGLVPHYLTF 357
+EA F++M+ +GL P T+
Sbjct: 349 TEEAKQVFDEMLEKGLFPTIRTY 371
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV Y +L+ R ++ + W EM+++ V P++ +Y ++ G +++ A
Sbjct: 398 PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGY 457
Query: 167 VKEMRKEGIEPNAIVYNTV 185
KEM+ +G+ PN V + +
Sbjct: 458 YKEMKDKGMRPNENVEDMI 476
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 183/369 (49%), Gaps = 17/369 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L A++ D A L + + G P+ T+ +LIR + + G + A+ F
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPN---AHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ N AS LL LC+ G++ +A + F R+ + PT +NILL G+F
Sbjct: 60 SSGLLPN----ASTMNTLLLGLCEIGQMSSALKLF--REMQAGPFLPTSASHNILLRGFF 113
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC----RLRRVDRAIRLVKEMRKEGIE 176
+ V+DA +MRK + + TY +++G C R+++A+ KEM+ G+E
Sbjct: 114 MAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ Y+ ++ L ++GR E + + C P ++TY L+ GYCK G A +
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSA-MTCSP--DIMTYNVLMDGYCKIGQTYEAQSL 230
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+K ++ G+ P+ TY+ + K KVE+A ++ KMIES P+ +T++ L+ CK
Sbjct: 231 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 290
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE-FEDMIRRGLVPHYL 355
L+ AI++ EM+ GC + T LI LC+ + + F + GL P +
Sbjct: 291 AGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 350
Query: 356 TFKRLNDEF 364
T+ L F
Sbjct: 351 TYNSLIQGF 359
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 22/371 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L + + SA L + G +P S + IL+R + AG V A+ + DM
Sbjct: 77 LCEIGQMSSALKLFREMQAGPFLPTSASHN---ILLRGFFMAGRVRDALAHLQ-----DM 128
Query: 65 VKNFDSGAS-LFEILLDSLC----KQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNG 118
K+ S A+ + ++L LC R++ A E+F KE+ S P + Y+ILL+
Sbjct: 129 RKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFF---KEMKASGVEPDLESYHILLSA 185
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
S + +A + M +P+++TY L++GYC++ + A L+KE+ K G EPN
Sbjct: 186 LSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPN 242
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y+ +I+ + + EE + + + P VT+ +L+ G+CKAG LE A K+
Sbjct: 243 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 302
Query: 239 MMISRGFLPSPTTYNYFFRYFSK-FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M G + TYN K G V A++L+ K+ +G TP +TY+ L++ C
Sbjct: 303 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDA 362
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+L A+Q EM+ + C ++ T ++LI LC++ + EA+ EDM G P +T+
Sbjct: 363 RRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTY 421
Query: 358 KRLNDEFKKRG 368
L + F K G
Sbjct: 422 GGLINGFCKCG 432
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 171/349 (48%), Gaps = 27/349 (7%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV--KNFDSGASLFEILLDSLCKQ 85
PD + T+ +L+ Y + G T+E + + + ++ + I+++ CK
Sbjct: 206 PDIM---TYNVLMDGYCKIG------QTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKL 256
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+V+ A E F K ++ + P +N L+ G+ ++ ++DA + + EM K +V
Sbjct: 257 DKVEEAWEVFMKM--IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIV 314
Query: 146 TYGTLVEGYCRLRR-VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
TY TL++ C+ R V A+ L ++ G+ P + YN++I G +A R E M+
Sbjct: 315 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEA---MQY 371
Query: 205 F--LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
F + + P ++TY+ L+ G CK ++ A+K L+ M + G+ P+ TY F K
Sbjct: 372 FDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKC 431
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+++ A+ + KM +G P+ + ++ L+ LCK ++ + +++ M GC D+ T
Sbjct: 432 GELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITY 491
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
LI LC + ++A F+ M P+ TF F RG+ A
Sbjct: 492 NCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFN-----FLIRGLCA 532
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 148/304 (48%), Gaps = 14/304 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + + AW + + I + VP+ V TF LI + +AGM+E AI F
Sbjct: 249 IINCYCKLDKVEEAWEVFMKMIESNCVPNAV---TFNTLIAGFCKAGMLEDAIKLFAEME 305
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQ-GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ + + L+DSLCK+ G V A + F+K + PT+ YN L+ G+
Sbjct: 306 KIGCKATIVT----YNTLIDSLCKKRGGVYTAVDLFNKLE--GAGLTPTIVTYNSLIQGF 359
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ + +A +++ EM + PNV+TY L++G C++RR+ A + +++M+ G P
Sbjct: 360 CDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTV 418
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y +I+G + G + E+ + P V + +L+ G CKA ++L
Sbjct: 419 VTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCH 478
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G P TYN +VEDA L+ M P+ T++ L++ LC + K
Sbjct: 479 MHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKK 535
Query: 300 LDLA 303
++ A
Sbjct: 536 VEEA 539
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 7/293 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL +L GR+ A F + +P + YN+L++G+ + +A+ E
Sbjct: 179 YHILLSALSDSGRMAEAHALFSA-----MTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K PNV TY ++ YC+L +V+ A + +M + PNA+ +NT+I G +AG
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYN 253
E+ + T+VTY +L+ CK G + A + + G P+ TYN
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F ++ +AM + +M E P+ +TY IL+ LCK ++ A + ++MK
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
G + T LI+ C+ + A FE M G P+ + F L D K
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCK 465
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 147/306 (48%), Gaps = 13/306 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ I+I Y + VE A F + M++ N A F L+ CK G ++ A +
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVF-----MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKN-VKDAERFWLEMRKENVTPNVVTYGTLVE 152
F + +++ T+ YN L++ + + V A + ++ +TP +VTY +L++
Sbjct: 300 LFAEMEKI--GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G+C RR+ A++ EM + PN I Y+ +IDGL + R +E + +E P
Sbjct: 358 GFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
T+VTY L+ G+CK G+L+ A + M G P+ +N K + D + L
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M G PD +TY+ L+ LC ++++ A ++ M C ++ T LI LC
Sbjct: 477 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAP---NVTTFNFLIRGLCAQ 533
Query: 333 YKFDEA 338
K +EA
Sbjct: 534 KKVEEA 539
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 141/301 (46%), Gaps = 13/301 (4%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+AP YN+L+ G+ + + A + +M+ + PN T TL+ G C + ++ A+
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+L +EM+ P + +N ++ G AGR + ++ TY ++KG
Sbjct: 88 KLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL 147
Query: 225 C----KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
C A LE A + K M + G P +Y+ S G++ +A L+ M S
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS-- 205
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD +TY++L+ CK + A + KE+ G + ++ T +++I+ C++ K +EA
Sbjct: 206 -PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRC 394
F MI VP+ +TF L F K GM A KL M +++ L+DS C
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 324
Query: 395 K 395
K
Sbjct: 325 K 325
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 42/233 (18%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N ++ GLV A + ++ + + L P TY L++G+CK G + A + M S
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP-------------------D 283
G LP+ +T N + G++ A+ L+R+M + P D
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 284 RL----------------TYHILLKILCKEDK----LDLAIQVSKEMKCRGCDIDLDTST 323
L TY+++LK LC E+K L+ A++ KEMK G + DL++
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+L+ L + EA A F M P +T+ L D + K G T AQ L
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSL 230
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 166/342 (48%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T LI+ G + A+ F + + + F + L++ LCK G+ AA +
Sbjct: 128 TLTTLIKGLCLKGQIHQAL---HFHDKV-VALGFHLNKVCYGTLINGLCKVGQTSAALQL 183
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R+ + P V +YN +++ + K V +A + EM + ++P+VVTY L+ G+
Sbjct: 184 L--RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGF 241
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C L +++ AI L +M E I P+ ++ ++DG + GR +E ++ + P +
Sbjct: 242 CILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDV 301
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY SL+ GYC + A I M G + +YN F K KV++AMNL+++
Sbjct: 302 VTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKE 361
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M PD +TY+ L+ LCK K+ A+++ EM RG D T ++ LC+ ++
Sbjct: 362 MHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 421
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+A A M G+ P T+ L D K G AQ +
Sbjct: 422 VDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K K + A+ L + + PD V T+ LI + G + AI F
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVV---TYSALISGFCILGKLNDAIGLF---- 254
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + + F IL+D CK+GRVK A + Q P V Y L++G+
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL--AMMMKQGIKPDVVTYCSLMDGYC 312
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V A+ + M + VT NV +Y ++ G+C++++VD A+ L KEM + I P+ +
Sbjct: 313 LVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVV 372
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN++IDGL ++G+ +++ +TY S++ CK ++ A +L M
Sbjct: 373 TYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM 432
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P TY K G+++DA N++ ++ GY TY ++++ C D
Sbjct: 433 KDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLF 492
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D A+ + +M+ GC + T ++I L + D A +MI RGL+
Sbjct: 493 DKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 179/366 (48%), Gaps = 12/366 (3%)
Query: 13 SAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDS 70
SA LL ++ G V P+ V +T +I + +V A + +MV K
Sbjct: 178 SAALQLLRRVDGKLVQPNVVMYNT---IIDSMCKVKLVNEAFDLYS-----EMVSKGISP 229
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+ L+ C G++ A F+K + + P V ++IL++G+ + VK+A+
Sbjct: 230 DVVTYSALISGFCILGKLNDAIGLFNKM--ISEEINPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
M K+ + P+VVTY +L++GYC +++V++A + M + G+ N YN +I+G
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ + +E + + P +VTY SL+ G CK+G + A K++ M RG
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKI 407
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K +V+ A+ L KM + G PD TY IL+ LCK +L A + +++
Sbjct: 408 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDL 467
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G +I + T T++I C FD+A A M G +P+ T++ + ++
Sbjct: 468 LVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEN 527
Query: 371 ALAQKL 376
+A+KL
Sbjct: 528 DMAEKL 533
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 154/328 (46%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ + G + F L + + P L+ G + A F +
Sbjct: 94 FNILINCFSQLGHTHFSFSVF--ANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDK 151
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ N V YGTL+ G C++ + A++L++ + + ++PN ++YNT+ID + +
Sbjct: 152 VVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 211
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P +VTY++L+ G+C G L A + MIS P T++
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G+V++A N+ M++ G PD +TY L+ C +++ A + M G
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ + ++I+ C++ K DEA F++M + ++P +T+ L D K G + A
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391
Query: 375 KLCNVMS--SVPRSM----ELLDSRCKD 396
KL + M VP +LD+ CK+
Sbjct: 392 KLVDEMHDRGVPHDKITYNSILDALCKN 419
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L+ + P + + +L + + A EM + ++VT+ L+ + +L
Sbjct: 48 LNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHT 107
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ + + K+G EPNAI T+I GL G+ + ++ + V Y +L
Sbjct: 108 HFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTL 167
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK G A ++L+ + + P+ YN K V +A +LY +M+ G
Sbjct: 168 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 227
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+PD +TY L+ C KL+ AI + +M + D+ T ++L+ C+ + EA
Sbjct: 228 SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
M+++G+ P +T+ L D + A+ + N M+
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
R L P P + + ++ K + A + + M G T+N FS+
Sbjct: 45 NRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQL 104
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G + +++ +++ GY P+ +T L+K LC + ++ A+ ++ G ++
Sbjct: 105 GHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCY 164
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRR 348
LI+ LC K + SA + ++RR
Sbjct: 165 GTLINGLC---KVGQTSAALQ-LLRR 186
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 181/357 (50%), Gaps = 8/357 (2%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
VL +A+ F W LL + VPD V+ T ++++ R A+ V + +F + +
Sbjct: 119 VLGRARRFAHMWDLL--RSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRML 176
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ D LF LL +LC++ + A +H L + + +NILL+GW K
Sbjct: 177 RGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHA---LKYEFKVNRQTFNILLSGW---K 230
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +DAE F EMR+ V P++VTY +L++ +C+ R V+ A +L+ EMR++ I P+ I Y
Sbjct: 231 SAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYT 290
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL G+ ++ +++ P + Y + ++ + A L A +++ M S+
Sbjct: 291 SLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASK 350
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P+ TTYN FFR + + A LY +M G P+ + ++++ + ++ A
Sbjct: 351 GLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQA 410
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ +M G S +L LLC K DEA F MI G P + F+R+
Sbjct: 411 LELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRI 467
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 183/401 (45%), Gaps = 16/401 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +LAK+ D W + +G + + +F I I+ + G V FE
Sbjct: 80 LDLLAKSGNLDRTWGFFTEYLGRTQFDVY----SFGITIKAFCENGNVSKG---FELLAQ 132
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
++ + ++ IL+++ C+ G + A F + +L A +Y I++NG+F+
Sbjct: 133 METM-GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL--GLAANQYIYTIMINGFFK 189
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
KD + +M+ V PN+ TY +L+ YCR ++ A ++ E+ K G+ NA+
Sbjct: 190 KGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I GL G+ + G++ER PT T+ L+ G C G L+ A L+ +
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G P+ TYN FSK G L R+M + G +P ++TY IL+ + D ++
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ MK G D T +LIH LC EAS ++ M+ L P+ + + +
Sbjct: 370 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMI 429
Query: 362 DEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
+ + K + A K V +V + + CKD
Sbjct: 430 NGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKD 470
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C+ G++ A + F + + + A YNIL+ G R V AE
Sbjct: 215 YNSLITEYCRDGKLSLAFKVFDEISK--RGVACNAVTYNILIGGLCRKGQVSKAEGLLER 272
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M++ ++ P T+ L++G C ++D+A+ +++++ G+ P + YN +I G + G
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGN 332
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
VS ++ P+ VTYT L+ + ++ D+E A ++ +M G +P TY
Sbjct: 333 SSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGV 392
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G + +A LY+ M+E P+ + Y+ ++ CKE A++ +EM G
Sbjct: 393 LIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNG 452
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
++ + I +LC+ K EA ++M GL P
Sbjct: 453 VTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 165/320 (51%), Gaps = 11/320 (3%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-F 68
+ + A L IG + +P+ V TF IL+ + GM+ A FE M +N
Sbjct: 261 QLNEATSLFKQMIGRNVMPNTV---TFTILVDGLCKEGMILEARRVFEM-----MTENGV 312
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+ A + L+D C Q ++ A + F + + +AP+VRVYNIL+NG +S+ + +A
Sbjct: 313 EPDAYTYSALMDGYCLQSQMDEAQKLFDIM--VGKGFAPSVRVYNILINGHCKSRRLNEA 370
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ EM ++TP+ VTY TL++G+C+ R A +L KEM G+ P++I Y+ ++DG
Sbjct: 371 KTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + G +E +++ + P + Y L++G C G LE A ++ + +G PS
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TY K G +A ++RKM+ +G P+ TY++ ++ + A+++ +
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIE 550
Query: 309 EMKCRGCDIDLDTSTMLIHL 328
EM RG D T ML+ L
Sbjct: 551 EMVGRGFSADSSTFQMLLDL 570
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
IL++ LC R + K PT + LLNG + DA + + E+
Sbjct: 109 ILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
K P+++TY T+++G C++ A++L+K+M ++G +P+ + YNTVID L + R
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + P +VTY+S++ G+C G L A+ + K MI R +P+ T+
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G + +A ++ M E+G PD TY L+ C + ++D A ++ M +G
Sbjct: 289 DGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFA 348
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ +LI+ C+ + +EA +M R L P +T+ L F + G +AQKL
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408
Query: 377 CNVMSS---VPRSME---LLDSRCK 395
M S +P S+ LLD CK
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCK 433
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 171/366 (46%), Gaps = 12/366 (3%)
Query: 6 AKAKEFDSAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
+KAK D+ L D+IG P + T+ +I+ + G A+ +
Sbjct: 153 SKAKIIDAVK--LFDEIGKMGFAPSLI---TYTTIIKGLCKIGHTTNALQLLKKMEE--- 204
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
K + ++DSLCK R A +F + +DQ P V Y+ +L+G+
Sbjct: 205 -KGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEM--VDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +A + +M NV PN VT+ LV+G C+ + A R+ + M + G+EP+A Y+
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++DG + +E + + + P++ Y L+ G+CK+ L A +L M R
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TY+ + F + G+ + A L+++M G PD +TY ILL LCK LD A
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ K M+ + + +LI +C K + A F ++ +G+ P +T+ +
Sbjct: 442 RLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGL 501
Query: 365 KKRGMT 370
K G++
Sbjct: 502 LKEGLS 507
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL+ LC + ++ A + F + ++ +AP++ Y ++ G + + +A + +
Sbjct: 144 FGTLLNGLCSKAKIIDAVKLFDEIGKM--GFAPSLITYTTIIKGLCKIGHTTNALQLLKK 201
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P+VV Y T+++ C+ RR + A+ EM +GI PN + Y++++ G G+
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + ++ + P VT+T LV G CK G + A ++ +MM G P TY+
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++++A L+ M+ G+ P Y+IL+ CK +L+ A + EM R
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T + L+ C+ + A F++M GL+P +T+ L D K G A
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441
Query: 375 KLCNVM 380
+L M
Sbjct: 442 RLLKAM 447
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 169/350 (48%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD V+ +T + + + RA A++ F +MV + + +L C G
Sbjct: 209 PDVVAYNTVIDSLCKDRRA---NEAMYFFS-----EMVDQGIPPNVVTYSSILHGFCNLG 260
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A+ F ++ + ++ P + IL++G + + +A R + M + V P+ T
Sbjct: 261 QLNEATSLF--KQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L++GYC ++D A +L M +G P+ VYN +I+G ++ R E ++
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P VTY++L++G+C+AG + A K+ K M S G LP TY+ K G ++
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLD 438
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L + M ES P Y+IL++ +C KL+ A ++ + +G + T T++I
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
L + +EA F M+ G +P+ T+ F + G + A +L
Sbjct: 499 SGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRL 548
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 2/276 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR--VDRAI 164
P V V+N LL + K+ +M N+ PNV T L+ C R V A
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ +M K G++P + + T+++GL + + + + P+++TYT+++KG
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G A ++LK M +G P YN K + +AM + +M++ G P+
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY +L C +L+ A + K+M R + T T+L+ LC+ EA FE
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
M G+ P T+ L D + + AQKL ++M
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 16/299 (5%)
Query: 95 FHKRKELDQSWAPTVRVY-NILLNGWFRSK-----NVKDAERFWLEMRKENVTPNVVTYG 148
F + S A T + + + NG F S +V DA + ++ P VV +
Sbjct: 14 FFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFN 73
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR------FEEVSGMM 202
L+ + + I L K+M I PN +I+ L + R F + M
Sbjct: 74 KLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMF 133
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L PT VT+ +L+ G C + A K+ + GF PS TY + K
Sbjct: 134 KLGL----QPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKI 189
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G +A+ L +KM E G PD + Y+ ++ LCK+ + + A+ EM +G ++ T
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ ++H C + + +EA++ F+ MI R ++P+ +TF L D K GM A+++ +M+
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 186/380 (48%), Gaps = 9/380 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ V K K+ SA + + G ++ D F L+ Y +G V AI F
Sbjct: 38 VVVSRKGKDSTSAVFAAILETKGTQISDLY---VFSGLMLAYLESGFVRDAIQCFRLTKK 94
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ FD+ + E L+ K + ++ ++ L+ + P++ +NIL++ + +
Sbjct: 95 HKIWVPFDTCRKVLEHLM----KLRYFRLVWGFY--KEILECGYPPSLYFFNILMHRFCK 148
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
++ A+ + + K ++ P+VV++ TL+ GY RL +D RL M G++P+
Sbjct: 149 EGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYT 208
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y+ +I+GL + + +E + M+ L P VT+T+L+ G+CK G ++ A +I K M+
Sbjct: 209 YSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQML 268
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S+GFLP TYN + G + A +L +MI G PD++TY L+ CKE L+
Sbjct: 269 SQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLE 328
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
+ ++ K M +D T T LI LCR + +A +M+ GL P T+ +
Sbjct: 329 ITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIM 388
Query: 362 DEFKKRGMTALAQKLCNVMS 381
+EF K G A KL M
Sbjct: 389 NEFCKTGDVKTASKLLREMQ 408
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 139/283 (49%), Gaps = 2/283 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F IL+ CK+G ++ A F + S P+V +N L+NG+ R ++ + R
Sbjct: 138 FFNILMHRFCKEGEMRLAQMVFDAITK--WSLRPSVVSFNTLMNGYIRLGDLDEGFRLKS 195
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M V P+V TY L+ G C+ ++D A ++ EM G+ PN + + T+IDG + G
Sbjct: 196 AMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + ++ L P ++TY +L+ G C+ GDL A +++ MI +G P TY
Sbjct: 256 KVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYT 315
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G +E L ++MI D +TY L+ LC+E + A ++ +EM
Sbjct: 316 TLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTV 375
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+++ C+ AS +M R G VP +T
Sbjct: 376 GLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL+ R+ + G + A F+ + + S F L++ + G + E F
Sbjct: 139 FNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVS----FNTLMNGYIRLGDL---DEGF 191
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P V Y++L+NG + + +A EM + PN VT+ TL++G+
Sbjct: 192 RLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGH 251
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +VD A+ + K+M +G P+ I YNT+I GL G + ++E ++ P
Sbjct: 252 CKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDK 311
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYT+L+ G CK GDLE ++ K MI TY + G+ DA + R+
Sbjct: 312 ITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLRE 371
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
M+ G PD TY +++ CK + A ++ +EM+ G
Sbjct: 372 MLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNG 411
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K ++ G+ PS +N F K G++ A ++ + + P ++++ L+ +
Sbjct: 125 KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRL 184
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LD ++ M G D+ T ++LI+ LC+ K DEA+ +M+ GLVP+ +TF
Sbjct: 185 GDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF 244
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
L D K G LA ++ M S
Sbjct: 245 TTLIDGHCKNGKVDLAMEIYKQMLS 269
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++DSLCK RV A ++F KE+ + P V Y L+NG S DA R
Sbjct: 193 YNAIIDSLCKTRRVNDALDFF---KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLR 249
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K +TPNV+TY L++ + + +V A + +EM + I+P+ + Y+++I+GL
Sbjct: 250 DMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E + M + + P +V+Y +L+ G+CKA +E K+ + M RG + + TYN
Sbjct: 310 RIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYN 369
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F + G V+ A + +M G +PD TY+ILL LC L+ A+ + ++M+
Sbjct: 370 TLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKS 429
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+D+ T T +I +C+ K ++A F + +GL P +T+ + +G+
Sbjct: 430 EMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+NI++N + V A +M K P+ VT G+LV G+CR RV A+ LV +M
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G P+ + YN +ID L + R + + P +VTYT+LV G C +G
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN 242
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A+++L+ MI R P+ TY+ F K GKV +A ++ +M+ PD +TY L+
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC D++D A Q+ M +GC D+ + LI+ C+ + ++ F M +RGLV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ +T+ L F + G AQ+ + M S
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDS 393
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 141/283 (49%), Gaps = 10/283 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ LC GR A+ R + + P V Y+ LL+ + ++ V +A+ + E
Sbjct: 228 YTALVNGLCNSGRWNDAARLL--RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEE 285
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++ P++VTY +L+ G C R+D A ++ M +G P+ + YNT+I+G +A R
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKR 345
Query: 195 FEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
E+ M +R LV VTY +L++G+ + GD++ A + M S G P
Sbjct: 346 VEDGMKLFRKMSQRGLV----NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIW 401
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN G +E A+ ++ M +S D +TY +++ +CK K++ A + +
Sbjct: 402 TYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSL 461
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+G D+ T T ++ LC E A + M + GL+ +
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 11/280 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L + ++ A LL D I P+ + T+ L+ + + G V A FE
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVI---TYSALLDAFVKNGKVLEAKEIFE--- 284
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+MV+ + D + L++ LC R+ A++ F + + P V YN L+NG+
Sbjct: 285 --EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM--VSKGCFPDVVSYNTLINGF 340
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V+D + + +M + + N VTY TL++G+ ++ VD+A +M G+ P+
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN ++ GL + G E+ + E E +VTYT++++G CK G +E A +
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCS 460
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+ +G P TY G + LY KM + G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEG 500
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ +N LL+ + K +M + ++ T+ ++ +C +V A+ +
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + ++++G R + ++++ + P +V Y +++ CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A K + +G P+ TY G+ DA L R MI+ TP+ +T
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y LL K K+ A ++ +EM D D+ T + LI+ LC + DEA+ F+ M+
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+G P +++ L + F K KL MS
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS 357
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 117/223 (52%), Gaps = 2/223 (0%)
Query: 156 RLR--RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
RLR ++ AI L +EM K P+ + +N ++ +V+ +++ V + ++ V
Sbjct: 60 RLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ T+ ++ +C + A +L M+ G+ P T F + +V DA++L
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+E GY PD + Y+ ++ LCK +++ A+ KE+ +G ++ T T L++ LC
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG 239
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++++A+ DMI+R + P+ +T+ L D F K G A+++
Sbjct: 240 RWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEI 282
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K+ DA+NL+R+M+++ P + ++ LL + K K D+ I + K+M+ G DL T
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
++I+ C ++ A + M++ G P +T L + F +R + A L + M +
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 384 PRSME------LLDSRCK 395
+ ++DS CK
Sbjct: 185 GYRPDIVAYNAIIDSLCK 202
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAAS 92
T+ LI+ + + G V+ A EF + +D +F + + ILL LC G ++ A
Sbjct: 367 TYNTLIQGFFQVGDVDKAQ---EFFSQMD---SFGVSPDIWTYNILLGGLCDNGLLEKAL 420
Query: 93 EYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
F ++ E+D + Y ++ G ++ V+DA + + + + P++VTY T+
Sbjct: 421 VIFEDMQKSEMDLD----IVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTM 476
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ G C L +M++EG+ N
Sbjct: 477 MSGLCTKGLQHEVEALYTKMKQEGLMKN 504
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 191/401 (47%), Gaps = 25/401 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L + +F W L++ ++ + F + Y+RA + + AI F
Sbjct: 121 VVDILGSSGQFAILWDFLIEI--RETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMG 178
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +G + LL +LCK+ V A ++F K K + + P+V+ Y+IL GW
Sbjct: 179 EFGI----RAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV---FNPSVKTYSILTRGWG 231
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A++ + EMR+ +V+ Y +L+E C+ + D A ++ EM G++P+A
Sbjct: 232 VVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDAD 291
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ I + V ++ER P + TY ++K CK ++E A +IL M
Sbjct: 292 TYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEM 351
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I RG P +YN Y +V A+NL ++M PD+ TY+++LK+L + +
Sbjct: 352 IERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRF 411
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLC-RMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A +V + M RG + T ++IH C + +K +EA FE MI G+ P+ T +
Sbjct: 412 DRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVEL 471
Query: 360 LNDE-----FK----------KRGMTALAQKLCNVMSSVPR 385
L D FK KR + Q+L N+MS R
Sbjct: 472 LRDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGKR 512
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 43/226 (19%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL--VCEPGPTMVTY----------- 217
R G EP+ Y+ V+D L +G+F ++ FL + E +++T+
Sbjct: 107 RIPGFEPSDDSYHIVVDILGSSGQF----AILWDFLIEIRETRSSVITHELFWHVFTAYS 162
Query: 218 -----TSLVKGYCKAGD------LEGASKILKMMISRG---------------FLPSPTT 251
++ + + G+ ++ K+L + R F PS T
Sbjct: 163 RADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKT 222
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y+ R + G +A ++ +M E G D L Y+ LL+ LCK K D A ++ EM
Sbjct: 223 YSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMD 282
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
G D D DT ++ I C+ E R+ L+P+ T+
Sbjct: 283 SNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTY 328
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 167/334 (50%), Gaps = 6/334 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA G V+ A+ F + + A + ++ LCK GRV+ A YF
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQ----QGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++G + AE LEM + N + + ++++ +C
Sbjct: 430 EQM--IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L + M + G++PN I YNT+I+G AG+ +E ++ + P V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY++L+ GYCK +E A + K M S G P TYN + + + A LY ++
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK D A+Q+ + + ++ T ++I L ++ +
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
DEA F GLVP+Y T++ + + +G+
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 174/350 (49%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + QG+V A
Sbjct: 338 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAM 391
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA ++ +M E ++P + Y +L+
Sbjct: 392 LVFSKMRQ--QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C + +RA L+ EM GI N I +N++ID + GR E + E + P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY +L+ GYC AG ++ A K+L M+S G P+ TY+ + K ++EDA+ L+
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M SG +PD +TY+I+L+ L + + A ++ + G I+L T +++H LC+
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
D+A F+++ L TF + D K G A+ L SS
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 3/288 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERFW 132
+ ILL LC + R + A E H + D+ P V Y ++NG+F+ + A +
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + P+VVTY +++ C+ + +D+A+ ++ M K G+ P+ + YN+++ G +
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+ +E G +++ P +VTY+ L+ CK G A KI M RG P TTY
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ ++ G + + L M+ +G PD + IL+ + K+D A+ V +M+
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQ 399
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G + + T +I +LC+ + ++A FE MI GL P + + L
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 179/385 (46%), Gaps = 15/385 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++ D GG PD VS + +I + + G + A T+ + ++ + + +
Sbjct: 183 MMADDRGGGSPPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT----YN 235
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ +LCK + A E + + P YN +L+G+ S K+A F +MR
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V P+VVTY L++ C+ R A ++ M K G++P Y T++ G G
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E+ G+++ + P ++ L+ Y G ++ A + M +G P+ TY
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G+VEDAM + +MI+ G +P + Y+ L+ LC +K + A ++ EM RG
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +I C+ + E+ FE M+R G+ P+ +T+ L + + G A KL
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 377 CNVMSSV---PRSM---ELLDSRCK 395
+ M SV P ++ L++ CK
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCK 558
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 37/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L C G+ K A + K + P V Y++L++ ++ +A + +
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRS--DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 135 MRKENVTPNVVTYGTLVEG-----------------------------------YCRLRR 159
M K + P + TYGTL++G Y +
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
VD+A+ + +MR++G+ PNA+ Y VI L ++GR E+ E+ + P + Y S
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G C E A +++ M+ RG + +N K G+V ++ L+ M+ G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ +TY+ L+ C K+D A+++ M G + T + LI+ C++ + ++A
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M G+ P +T+ + + TA A++L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIR-------------------------------- 165
+ VTP++ TYG L+ CR R+D
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 166 ----LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYT 218
+++ M + G PN YN ++ GL + R +E ++ G P +V+YT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G+ K GD + A M+ RG LP TYN K ++ AM + M+++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY+ +L C + AI K+M+ G + D+ T ++L+ LC+ + EA
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 109/255 (42%), Gaps = 2/255 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ C G++ A + + P Y+ L+NG+ + ++DA + E
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSV--GLKPNTVTYSTLINGYCKISRMEDALVLFKE 571
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ M + + + T+ ++ K G + A + S G +P+ TY
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +E+ L+ M ++G T D + +++ L + ++ A + +
Sbjct: 692 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
Query: 315 CDIDLDTSTMLIHLL 329
++ T+++ I LL
Sbjct: 752 FSLEASTASLFIDLL 766
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 183/401 (45%), Gaps = 16/401 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +LAK+ D W + +G + + +F I I+ + G V FE
Sbjct: 80 LDLLAKSGNLDRTWGFFTEYLGRTQFDVY----SFWITIKAFCENGNVSKG---FELLAQ 132
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
++ + ++ IL+++ C+ G + A F + +L A +Y I++NG+F+
Sbjct: 133 METM-GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL--GLAANQYIYTIMINGFFK 189
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
KD + +M+ V PN+ TY +L+ YCR ++ A ++ E+ K G+ NA+
Sbjct: 190 KGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I GL G+ + G++ER PT T+ L+ G C G L+ A L+ +
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G P+ TYN FSK G L R+M + G +P ++TY IL+ + D ++
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ MK G D T +LIH LC EAS ++ M+ L P+ + + +
Sbjct: 370 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMI 429
Query: 362 DEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
+ + K + A K V +V + + CKD
Sbjct: 430 NGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKD 470
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C+ G++ A + F + + + A YNIL+ G R V AE
Sbjct: 215 YNSLITEYCRDGKLSLAFKVFDEISK--RGVACNAVTYNILIGGLCRKGQVSKAEGLLER 272
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M++ ++ P T+ L++G C ++D+A+ +++++ G+ P + YN +I G + G
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGN 332
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
VS ++ P+ VTYT L+ + ++ D+E A ++ +M G +P TY
Sbjct: 333 SSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGV 392
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G + +A LY+ M+E P+ + Y+ ++ CKE A++ +EM G
Sbjct: 393 LIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNG 452
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
++ + I +LC+ K EA ++M GL P
Sbjct: 453 VTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 191/388 (49%), Gaps = 22/388 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +LAK F A LL D++ VP +S + LIRRY RA M A F
Sbjct: 151 MIDLLAKHHHFPLARHLL-DEMRERSVP--ISAQLILALIRRYVRAEMPSEASDLFR--- 204
Query: 61 NLDMVKNFDSGA---SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
++ + +GA + LL +L K+ A F K + + P V +Y L++
Sbjct: 205 ---RMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSV---FTPDVVLYTTLVH 258
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
W RS + +AER + EM++ VTPNV TY +++ R +V RA L+ +M G P
Sbjct: 259 AWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPP 318
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAG--DLEGA 233
N +N ++ V+AGR E+V + R L CEP ++TY L++ +C G +L+ A
Sbjct: 319 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPD--IITYNFLMETHCGKGQSNLDAA 376
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K+L MI++G +P T+N + G V A LY +M E P+ +TY++L+++
Sbjct: 377 MKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRL 436
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVP 352
E +D+ +++ ++M +G + +++T LI C + A +M+ + L P
Sbjct: 437 FNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKP 496
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + +K G ++L +M
Sbjct: 497 TKPVYDMVLALLRKAGQLRRHEELVEMM 524
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 10/253 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + +A + A LL I P+ TF ++R + +AG E +
Sbjct: 291 VIDAMYRAGQVPRAQELLCQMIDSGCPPNTA---TFNAIMRAHVKAGRSEQVLQVHNQMR 347
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + + L+++ C +G+ + + + + P +N +L
Sbjct: 348 QLGCEPDIIT----YNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVL 403
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
NV A + + M++ PNVVTY L+ + + +D +R+ ++M +G+EPN
Sbjct: 404 VLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVN 463
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
Y +I+ G ++ + M R +V E PT Y ++ KAG L ++++
Sbjct: 464 TYAALIEAFCGRGNWKR-AHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVE 522
Query: 239 MMISRGFLPSPTT 251
MM+ RGF+ P
Sbjct: 523 MMVDRGFISRPAN 535
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 188/370 (50%), Gaps = 12/370 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L AK ++ L + + + +P+ V TF +L+R + R GMVE AI E +
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEV---TFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +L I+++++CKQGRV A ++ + S P Y +L G
Sbjct: 313 GHGCAAN----TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS--PDTISYTTVLKGLC 366
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R++ +DA+ EM ++N PN VT+ T + C+ +++A L+++M + G E N +
Sbjct: 367 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV 426
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +++G GR V +E F P +TYT+L+ G C A L+ A+++L M
Sbjct: 427 TYNALVNGFCVQGR---VDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEM 483
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ + P+ T+N +F + G +++A+ L +M+E G TP+ +TY+ LL + +
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNS 543
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+++ + G D+ T + +I +L R + +EA F + G+ P + + ++
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603
Query: 361 NDEFKKRGMT 370
KR T
Sbjct: 604 LLALCKRCNT 613
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 162/352 (46%), Gaps = 15/352 (4%)
Query: 39 LIRRYARAGMVEAA---IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
L+ Y R G ++AA I + A + A + ++ LC +GRV A
Sbjct: 119 LVAGYCRYGQLDAARRLIASMPVAPD----------AYTYTPIIRGLCDRGRVGEALSLL 168
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
L + P+V Y +LL +S A EMR + TPN+VTY ++ G C
Sbjct: 169 DDM--LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R RVD A + + G +P+ + Y TV+ GL A R+E+V + + P V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+ LV+ +C+ G +E A ++L+ M G + T N K G+V+DA M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G +PD ++Y +LK LC+ ++ + A ++ KEM + C + T I +LC+
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSM 387
++A+ E M G + +T+ L + F +G A +L M P ++
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 34/320 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ +C++GRV A E+ ++ + P Y +L G +K +D E + E
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 275
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++N PN VT+ LV +CR V+RAI+++++M G N + N VI+ + + GR
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + P ++YT+++KG C+A E A ++LK M+ + P+ T+N
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESG----------------------------YT----P 282
F + G +E A L +M E G Y+ P
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKP 455
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY LL LC ++LD A ++ EM + C ++ T +L+ C+ DEA
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515
Query: 343 EDMIRRGLVPHYLTFKRLND 362
E M+ G P+ +T+ L D
Sbjct: 516 EQMMEHGCTPNLITYNTLLD 535
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 12/314 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A+ ++ A LL + + + P+ V+ +TF+ ++ + G++E A E +
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL---CQKGLIEQATMLIEQMS 417
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + L++ C QGRV +A E F+ P Y LL G
Sbjct: 418 EHGCEVNIVT----YNALVNGFCVQGRVDSALELFYS-----MPCKPNTITYTTLLTGLC 468
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + A EM +++ PNVVT+ LV +C+ +D AI LV++M + G PN I
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++DG+ EE ++ + P +VTY+S++ + +E A K+ ++
Sbjct: 529 TYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P YN K + A++ + M+ +G P+ LTY L++ L ED L
Sbjct: 589 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFL 648
Query: 301 DLAIQVSKEMKCRG 314
+ +E+ RG
Sbjct: 649 KETRDLLRELCSRG 662
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 124/277 (44%), Gaps = 3/277 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V + L+ R DA R + +V Y TLV GYCR ++D A R
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ M + P+A Y +I GL + GR E +++ L P++VTYT L++ C
Sbjct: 135 LIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K+ A ++L M ++G P+ TYN + G+V+DA ++ G+ PD +
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y +LK LC + + ++ EM + C + T ML+ CR + A E M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G + + + K+G A + N M S
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 20/355 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I + K D A+ L+ +G + PD +S T + G+ A W E A
Sbjct: 326 VINTICKQGRVDDAF-QFLNNMGSYGCSPDTISYTTVL--------KGLCRAERW--EDA 374
Query: 60 NNL--DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
L +MV KN F + LC++G ++ A+ + E + YN L+
Sbjct: 375 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE--HGCEVNIVTYNALV 432
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+ V A + M PN +TY TL+ G C R+D A L+ EM ++
Sbjct: 433 NGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 489
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + +N ++ + G +E ++E+ + P ++TY +L+ G + E A ++
Sbjct: 490 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALEL 549
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L ++S G P TY+ S+ +VE+A+ ++ + + G P + Y+ +L LCK
Sbjct: 550 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 609
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D AI M GC + T LI L E ++ RG++
Sbjct: 610 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
D L EA R +++R P + T L++ C+ G A+++L+ G
Sbjct: 57 DDLAEAAR------LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTA 110
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAIQ 305
YN + ++G+++ A R++I S PD TY +++ LC ++ A+
Sbjct: 111 VDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ +M RGC + T T+L+ +C+ F +A ++M +G P+ +T+ + +
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 366 KRGMTALAQKLCNVMSS 382
+ G A++ N +SS
Sbjct: 227 REGRVDDAREFLNRLSS 243
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 191/401 (47%), Gaps = 25/401 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L + +F W L++ ++ + F + Y+RA + + AI F
Sbjct: 121 VVDILGGSGQFAILWDFLIEI--RETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMG 178
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +G + LL +LCK+ V A ++F K K + + P+V+ Y+IL GW
Sbjct: 179 EFGI----RAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV---FNPSVKTYSILTRGWG 231
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A++ + EMR+ +V+ Y +L+E C+ + D A ++ EM G++P+A
Sbjct: 232 VVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDAD 291
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ I + V ++ER P + TY ++K CK ++E A +IL M
Sbjct: 292 TYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEM 351
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I RG P +YN Y +V A+NL ++M PD+ TY+++LK+L + +
Sbjct: 352 IERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRF 411
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLC-RMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A +V + M RG + T ++IH C + +K +EA FE MI G+ P+ T +
Sbjct: 412 DRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVEL 471
Query: 360 LNDE-----FK----------KRGMTALAQKLCNVMSSVPR 385
L D FK KR + Q+L N+MS R
Sbjct: 472 LRDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGKR 512
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 43/226 (19%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL--VCEPGPTMVTY----------- 217
R G EP+ Y+ V+D L +G+F ++ FL + E +++T+
Sbjct: 107 RIPGFEPSDDSYHIVVDILGGSGQF----AILWDFLIEIRETRSSVITHELFWHVFTAYS 162
Query: 218 -----TSLVKGYCKAGD------LEGASKILKMMISRG---------------FLPSPTT 251
++ + + G+ ++ K+L + R F PS T
Sbjct: 163 RADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKT 222
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y+ R + G +A ++ +M E G D L Y+ LL+ LCK K D A ++ EM
Sbjct: 223 YSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMD 282
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
G D D DT ++ I C+ E R+ L+P+ T+
Sbjct: 283 SNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTY 328
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 189/383 (49%), Gaps = 15/383 (3%)
Query: 1 MIKVLAKAKEFDSAWCL---LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I +L + EF+ A + L+ K G ++ F + +LIR + R+G +++A+ F
Sbjct: 71 LIDILVNSGEFERAELVYKKLVQK--GCQLDRFA----YNVLIRYFGRSGQLDSAMEMFR 124
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+K + + L+++L K GRV+ A +F L++ P + YN+L++
Sbjct: 125 EMK----IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM--LERGLTPNIPTYNLLMD 178
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + + A + EM++ P+VVTY L++ C RV A +L +M +G P
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
++ Y+T+++GL ++GR EE + + +V Y SL+ KAG+++ K++
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLM 298
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M +GF P ++N K K + A ++ +M+ESG PD ++Y+IL+ +
Sbjct: 299 KEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARF 358
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
A Q+ +EM G + T LIH L + DEA A E+M G P +T+
Sbjct: 359 GDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTY 418
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
RL D KRG A +L M
Sbjct: 419 NRLMDMLGKRGENQRAARLFQQM 441
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 38/427 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAA------- 52
+I+ ++ + DSA + + KI G E ++ T+ L+ +AG V+ A
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEY----TYGFLVNALGKAGRVQEARSFFDAM 161
Query: 53 ---------------IWTFEFANNLDMV---------KNFDSGASLFEILLDSLCKQGRV 88
+ F LDM + F + ILLD+LC GRV
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
AA + FHK +P Y+ L+NG +S V++A + + EM V ++V Y
Sbjct: 222 GAARKLFHKMT--GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYN 279
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
+L+ + +DR +L+KEM ++G P+A +NT++D L +A + + + R +
Sbjct: 280 SLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P +++Y L+ Y + GD A ++L+ M+ GF+P TYN + + G+V++A
Sbjct: 340 GCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEA 399
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ +M +G PD +TY+ L+ +L K + A ++ ++MK +G + D + + I
Sbjct: 400 FAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDG 459
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
L + DEA F+DM G ++ L + G T L +L + +P
Sbjct: 460 LAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVESR 519
Query: 389 LLDSRCK 395
L + K
Sbjct: 520 LTSQKAK 526
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 141/313 (45%), Gaps = 25/313 (7%)
Query: 75 FEILLDSLCKQGR-------VKAASEYFHKRKELD--------QSWA--PTVRVYNILLN 117
E LL + +GR VK + Y K D +S+A PTV + L++
Sbjct: 14 LETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLID 73
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
S + AE + ++ ++ + Y L+ + R ++D A+ + +EM+ +G EP
Sbjct: 74 ILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP 133
Query: 178 NAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
+ Y +++ L +AGR +E M+ER L P + TY L+ + K G L+ A
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLT----PNIPTYNLLMDAFRKVGQLDMA 189
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ M RGF PS TYN G+V A L+ KM G +PD TY L+
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
L K +++ A +V +EM RG +DL L+ L + D ++M R+G P
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309
Query: 354 YLTFKRLNDEFKK 366
+F + D K
Sbjct: 310 AFSFNTIMDALGK 322
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+ + R DA + + +P V + L++ +RA + K++ ++G
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ + YN +I +G+ + M + P TY LV KAG ++ A
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
M+ RG P+ TYN F K G+++ A+ L+ +M G+ P +TY+ILL L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C ++ A ++ +M GC D T + L++ L + + +EA F +M+ RG+
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ + L K G KL MS
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMS 302
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 6/185 (3%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T L+ Y + A + S P+ + G+ E A +Y+K+
Sbjct: 32 TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
++ G DR Y++L++ + +LD A+++ +EMK +G + D T L++ L + +
Sbjct: 92 VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRV 151
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMEL 389
EA + F+ M+ RGL P+ T+ L D F+K G +A L M SV L
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211
Query: 390 LDSRC 394
LD+ C
Sbjct: 212 LDALC 216
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%)
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G L+ +LK M++ G P T + + K DA +L+ + +P +
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L+ IL + + A V K++ +GC +D +LI R + D A F +M
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G P T+ L + K G A+ + M
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 170/353 (48%), Gaps = 10/353 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S F L+ Y G V AI F ++ F+ + LL+ + K A
Sbjct: 161 SSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGC----KCLLERMIKMSSPMVA 216
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E++ + LD + P V +N+L+N + VKDA+ + E+RK + P V++ TL+
Sbjct: 217 LEFY--LEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLI 274
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
GYC+ ++ RL M + + P+ Y+ +IDGL + + E+ + + + +C+ G
Sbjct: 275 NGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKE--MCDRG 332
Query: 212 --PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P VT+T+L+ G CK G ++ A +I + M ++G YN K G +A
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+M + G PD+ TY LL CKE L+LA+++ KEM G +D T +I L
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
CR K +A +M+R GL P T+ + D F K+G + KL M S
Sbjct: 453 CRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQS 505
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 168/339 (49%), Gaps = 16/339 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +L+ R + G V+ A F+ + A F L++ CK G ++ E
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGL----QPTAVSFNTLINGYCKSGNLE---EG 286
Query: 95 FHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + +++ P V Y+ L++G + ++DA + EM + PN VT+ TL+ G
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCE 209
C+ RVD A+ + ++M +G++ + ++YNT+IDGL + G F E V M +R L+
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLI-- 404
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P TYT+L+ G CK GDLE A ++ K M+ G + + GK+ DA
Sbjct: 405 --PDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAE 462
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
R+M+ +G PD TY +++ CK+ + + ++ KEM+ G + T +L++ L
Sbjct: 463 RTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGL 522
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ + A M+ G+VP +T+ L K G
Sbjct: 523 CKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHG 561
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ CK GRV A E + ++ + + +YN L++G + ++A +F E
Sbjct: 340 FTTLINGQCKNGRVDLALEIY--QQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGE 397
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K + P+ TY TL++G C+ ++ A+ + KEM KEGI+ + + + +I GL G+
Sbjct: 398 MTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGK 457
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + L P TYT ++ G+CK GD++ K+LK M S G +P TYN
Sbjct: 458 IVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNV 517
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+V++A L M+ G PD +TY+ILL+ CK KL V EM G
Sbjct: 518 LMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---G 574
Query: 315 CDIDLDTSTMLIHLLCRMYK 334
D + L+H L + K
Sbjct: 575 LVSDYASYRSLLHELSKASK 594
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 70/225 (31%)
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR------------ 273
+ G +S ++ ++G L S ++ +++FG V DA+ +R
Sbjct: 139 RKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFN 198
Query: 274 -----------------------KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
++++SGY P+ T+++L+ LCKE K+ A + E+
Sbjct: 199 GCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258
Query: 311 K------------------CRGCDI-----------------DLDTSTMLIHLLCRMYKF 335
+ C+ ++ D+ T + LI LC+ +
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++A+ F++M RGLVP+ +TF L + K G LA ++ M
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQM 363
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 168/352 (47%), Gaps = 11/352 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PDF+ T+ +I + G V A F +MV K + + L+D CK+G
Sbjct: 291 PDFI---TYTAVICGLCQTGRVMEADKLFH-----EMVCKRLEPDEVTYTALIDGYCKEG 342
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++K A + + L P + Y L +G + V A EM ++ + N+ T
Sbjct: 343 KMKEA--FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +LV G C+ +D+A++L+K+M G P+A+ Y T++D ++ ++ + L
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E PT+VT+ L+ G+C +G LE K+LK M+ +G +P+ TTYN + + +
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+YR M G PD TY+IL+K CK + A + ++M +G ++ + + LI
Sbjct: 521 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ KF EA FE M R GLV + D G L +LC+
Sbjct: 581 KGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCD 632
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 17/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +L K + A +L + I PD V + LI + + G V +A F+
Sbjct: 229 VILLLCKTGKVAEAERVLREMISEGIAPDGV---IYTTLIDGFCKLGNVSSAYRLFDEMQ 285
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH----KRKELDQSWAPTVRVYNILL 116
+ +F + + ++ LC+ GRV A + FH KR E D+ Y L+
Sbjct: 286 KRKISPDFIT----YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV------TYTALI 335
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ + +K+A +M + +TPN+VTY L +G C+ VD A L+ EM ++G+E
Sbjct: 336 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 395
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
N YN++++GL +AG ++ +M+ V P VTYT+L+ YCK+ ++ A ++
Sbjct: 396 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 455
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L+ M+ R P+ T+N F G +ED L + M+E G P+ TY+ L+K C
Sbjct: 456 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 515
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ + ++ + M +G D +T +LI C+ EA DM+ +G +
Sbjct: 516 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 575
Query: 357 FKRLNDEFKKR 367
+ L F KR
Sbjct: 576 YNALIKGFYKR 586
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 131/270 (48%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P YN ++ ++ V +AER EM E + P+ V Y TL++G+C+L V A RL
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM+K I P+ I Y VI GL + GR E + + P VTYT+L+ GYCK
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G ++ A + M+ G P+ TY K G+V+ A L +M G + T
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LCK +D A+++ K+M+ G D T T L+ C+ + A M+
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
R L P +TF L + F GM +KL
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 128/247 (51%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM+ + + PN TY ++ C+ +V A R+++EM EGI P+ ++Y T+IDG + G
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG 272
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + P +TYT+++ G C+ G + A K+ M+ + P TY
Sbjct: 273 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ K GK+++A +L+ +M++ G TP+ +TY L LCK ++D A ++ EM +
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++++ T L++ LC+ D+A +DM G P +T+ L D + K A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452
Query: 374 QKLCNVM 380
+L M
Sbjct: 453 HELLRQM 459
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 50/329 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI Y + G ++ A F N + + + L D LCK G
Sbjct: 326 PDEV---TYTALIDGYCKEGKMKEA---FSLHNQM-LQMGLTPNIVTYTALADGLCKCGE 378
Query: 88 VKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
V A+E H+ RK L+ + + YN L+NG ++ N+ A + +M P+ V
Sbjct: 379 VDTANELLHEMCRKGLELN----IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL++ YC+ R + RA L+++M ++P + +N +++G +G E+ +++
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494
Query: 206 L---------------------------------VCEPG--PTMVTYTSLVKGYCKAGDL 230
L +C G P TY L+KG+CKA ++
Sbjct: 495 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM 554
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + + M+ +GF + ++YN + F K K +A L+ +M G DR Y+I
Sbjct: 555 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614
Query: 291 LKILCKEDKLDLAIQVSKEM--KCRGCDI 317
I E K++L +++ E KC DI
Sbjct: 615 ADINYDEGKMELTLELCDEAIEKCLVGDI 643
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 6/239 (2%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
++L++EM+ +G++PN YN VI L + G+ E ++ + P V YT+L+
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G+CK G++ A ++ M R P TY + G+V +A L+ +M+ P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +TY L+ CKE K+ A + +M G ++ T T L LC+ + D A+
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV---PRSM---ELLDSRCK 395
+M R+GL + T+ L + K G A KL M P ++ L+D+ CK
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 445
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%)
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+DG+ A + E V ++E + P TY ++ CK G + A ++L+ MIS G
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 254
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P Y F K G V A L+ +M + +PD +TY ++ LC+ ++ A +
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 314
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ EM C+ + D T T LI C+ K EA + M++ GL P+ +T+ L D
Sbjct: 315 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 374
Query: 366 KRGMTALAQKLCNVM 380
K G A +L + M
Sbjct: 375 KCGEVDTANELLHEM 389
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 9/342 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP V+ +T L+ Y + G +AAI ++ + K ++ + + +D+LC
Sbjct: 1016 VPTIVTYNT---LLNWYCKKGRYKAAIELIDYM----ICKGIEADVCTYNVFIDNLCTNH 1068
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R +A Y +K + +P YN L+NG+ + + A + + EM K +++PN VT
Sbjct: 1069 R--SAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 1126
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G+C + + A+RL+ M G+ N + Y T+++GL + +FE ++ER
Sbjct: 1127 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V + + YT L+ G CK G L+ A +++ M G P TY+ F + G ++
Sbjct: 1187 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 1246
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + +M SG +++ Y L+ C+ + A++V M C G D T +L+
Sbjct: 1247 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 1306
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LCR K EA M R GLVP+ +T+ + + + G
Sbjct: 1307 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 1348
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 188/447 (42%), Gaps = 60/447 (13%)
Query: 4 VLAKAKEFDSAWCLL--LDKIGGHEVPDFVS-----------KDTFVILIRRYARAGMVE 50
+L KA+ +DSA +L L ++G F + F +LIR Y + GM++
Sbjct: 872 ILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 931
Query: 51 AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR 110
A+ TFE + F ++L S+ K R + F R+ D+ P V
Sbjct: 932 YAVETFELVG----LVGFKPSVYTCNMILASMVKDKRTELVWSLF--REMSDKGICPNVG 985
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV--- 167
+NIL+NG N+K A +M + P +VTY TL+ YC+ R AI L+
Sbjct: 986 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045
Query: 168 --------------------------------KEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K+MRKE I PN + YNT+I+G V+ G+
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKI 1105
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + + P VTY +L+ G+C GD E A ++L M + G + TY
Sbjct: 1106 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTL 1165
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K K E A L +M + + Y +L+ LCK LD A+Q+ M G
Sbjct: 1166 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 1225
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ D+ T + LI+ CR+ A M R GLV + + + L F + G A K
Sbjct: 1226 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 1285
Query: 376 LCNVMSSVPRSME------LLDSRCKD 396
+ VM+ + L+ S C+D
Sbjct: 1286 VYAVMNCNGHGADHFTCNVLVSSLCRD 1312
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 2/307 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ L+D L K G KAA +F + + + P +N +++ R + A F+
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEM--MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFS 1534
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
MR V PN+ TY L+ G+ + + + R + L M +EGI P+ + ++++I GL ++G
Sbjct: 1535 TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 1594
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ ++ + ++ T+ L+ Y ++G + A ++ M + G P TYN
Sbjct: 1595 IPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYN 1654
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F +K ++ + +M+E+G P Y L+ +C+ + A ++ EM+
Sbjct: 1655 HIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEAL 1714
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + ++ L K ++A + M+R L+P TF L F + A A
Sbjct: 1715 GFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEA 1774
Query: 374 QKLCNVM 380
KL VM
Sbjct: 1775 LKLKGVM 1781
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 170/404 (42%), Gaps = 53/404 (13%)
Query: 13 SAWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
+A CL +G G P+ V + L+ ++AG +AA + FE +M+K
Sbjct: 1457 TAVCLFGTAMGRGTLFPNHV---MYTCLVDGLSKAGHPKAAFYFFE-----EMMKKGTCP 1508
Query: 72 ASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSW---APTVRVYNILLNGWFRSKNVKD 127
++ F ++DS ++G++ A+++F + W P + YNILL+G+ + + +
Sbjct: 1509 DTVAFNAIIDSCSRRGQMMKANDFFSTMR-----WWGVCPNLATYNILLHGFSKKQALLR 1563
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEG---------------------------------- 153
+ M +E + P+ +T+ +L+ G
Sbjct: 1564 YLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILIN 1623
Query: 154 -YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
Y ++ +A LV M G+ P+ YN + +GL + F E + ++ L P
Sbjct: 1624 KYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIP 1683
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
Y +L+ G C+ GD++GA K+ M + GF + R GK EDAM +
Sbjct: 1684 KHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVL 1743
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M+ P T+ L+ C++ K+ A+++ M+ G +D+ +LI +C
Sbjct: 1744 DHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCAN 1803
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A +E+M R L P+ T+ L D +KL
Sbjct: 1804 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1847
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 150/344 (43%), Gaps = 14/344 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI--LLDSLCK 84
VP+ ++ D +I Y G A F+ DM+K S F LL LCK
Sbjct: 1331 VPNSITYDC---IINGYGSIGDPLNAFSFFD-----DMIK-CGQHPSFFTYGSLLKGLCK 1381
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
G + A ++ ++ + A +YN LL +S N+ +A + +M + NV P+
Sbjct: 1382 GGNLVEAKKFLNRLHYI--PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439
Query: 145 VTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
TY +L+ G CR + A+ L M + + PN ++Y ++DGL +AG + E
Sbjct: 1440 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P V + +++ + G + A+ M G P+ TYN FSK
Sbjct: 1500 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ ++LY M+ G PD+LT+H L+ L K DL +++ +M G D T
Sbjct: 1560 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 1619
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+LI+ K +A M G+ P T+ + + K+
Sbjct: 1620 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 1663
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 150/393 (38%), Gaps = 53/393 (13%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL----C 83
PD + T+ LI + R G +++A + + + SG L +I+ +L C
Sbjct: 1227 PDVI---TYSSLINGFCRVGNIKSAKEI--------ICRMYRSGLVLNKIIYSTLIYNFC 1275
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G V A + + N+L++ R + +AE+F M + + PN
Sbjct: 1276 QHGNVTEAMKVYAVMN--CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPN 1333
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+TY ++ GY + A +M K G P+ Y +++ GL + G E +
Sbjct: 1334 SITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 1393
Query: 204 RFL-----------------VCEPG------------------PTMVTYTSLVKGYCKAG 228
R C+ G P TY+SL+ G C+ G
Sbjct: 1394 RLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 1453
Query: 229 DLEGASKILKMMISRGFL-PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
A + + RG L P+ Y SK G + A + +M++ G PD + +
Sbjct: 1454 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAF 1513
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ ++ + ++ A M+ G +L T +L+H + + + M+R
Sbjct: 1514 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 1573
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
G+ P LTF L K G+ L KL M
Sbjct: 1574 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 1606
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 2/240 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ + G+++ A + + L P YN + NG + +++ E
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTL--GVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 1675
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P Y TL+ G CR+ + A +L EM G + + + ++ GL+ G+
Sbjct: 1676 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 1735
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ +++ L PT+ T+T+L+ +C+ + A K+ +M G YN
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1795
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G A LY +M P+ TY +L+ + + L ++ +++ RG
Sbjct: 1796 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 14/322 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI +RAG+ + W NL + + F A F IL+D LCK+G+V A +
Sbjct: 1157 TYNSLIHGLSRAGLWKEVTWFL----NLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212
Query: 95 F----HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
HK KE P + YN L+NG ++DA + + + + NV +Y L
Sbjct: 1213 LELMRHKGKE------PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 1266
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ GYC+ +++D A R +EMR +G++P+ + YNT+I L ++GR + C
Sbjct: 1267 INGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 1326
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ TY L+ G CK G LE A + + + P+ ++ + GK+E+A
Sbjct: 1327 FLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 1386
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ ++ ++G PD + Y+IL+ LC + L A+++ +M+ +GC D T ++I L
Sbjct: 1387 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 1446
Query: 331 RMYKFDEASAEFEDMIRRGLVP 352
+ + EA E+M R P
Sbjct: 1447 KENEIHEAIQLLEEMRNRNFSP 1468
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 172/343 (50%), Gaps = 8/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I + GM A+ F ++ + ++ L+D LC+ GR+K A E+
Sbjct: 1087 TYGMIIDALCKDGMTTEALDMFSEMIGAGILPD----VVVYSSLMDGLCRFGRLKEALEF 1142
Query: 95 FHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F KE++ + + V YN L++G R+ K+ F M +P+ T+ L++G
Sbjct: 1143 F---KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 1199
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +V A ++++ MR +G EP+ + YNT+++GL G+ E+ + + E
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 1259
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ +Y L+ GYCK ++ A + + M +G PS TYN + G+V A L+
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G TY +LL LCK L+ A+ + + +K +++ ++L+ +CR
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG 1379
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K +EA +F+++ + GL P + + L + +GM + A KL
Sbjct: 1380 KLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 1422
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 3/297 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + IL++ LCK + A + K K + V Y ++++ + +A
Sbjct: 1051 AKTYGILINGLCKARKTGLAIKLHEKMK---GNCKGDVFTYGMIIDALCKDGMTTEALDM 1107
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM + P+VV Y +L++G CR R+ A+ KEM GI + YN++I GL
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 1167
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
AG ++EV+ + + P T+T L+ G CK G + A +IL++M +G P T
Sbjct: 1168 AGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILT 1227
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN G++EDA L+ + + G + +Y+IL+ CK+ K+D A + +EM+
Sbjct: 1228 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR 1287
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+G T LI LC+ + A F +M G T+ L D K G
Sbjct: 1288 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 1344
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + + P L+ G + + DA + + EM K+ + + TYG L+ G C+ R+
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
Query: 161 DRAIRLVKEMRKE----------------------------------GIEPNAIVYNTVI 186
AI+L ++M+ GI P+ +VY++++
Sbjct: 1068 GLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DGL GR +E + + TY SL+ G +AG + + L +M+ RGF
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P T+ K GKV +A + M G PD LTY+ L+ LC +L+ A ++
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ + RG +++ + +LI+ C+ K DEA FE+M +GL P +T+ L +
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307
Query: 367 RGMTALAQKLCNVMSSVPRSME------LLDSRCKD 396
G AQKL M + + ++ LLD CK+
Sbjct: 1308 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN 1343
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 137/323 (42%), Gaps = 11/323 (3%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S FE + C+ G +K + L P +N LL + +
Sbjct: 910 SPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMY 969
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL-VE 191
++ + P++ T L+ C LR V + K G EP+A+ T++ G+ +E
Sbjct: 970 RKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWME 1029
Query: 192 AGRFEEVS---GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
G + V M ++ L+ + TY L+ G CKA A K+ + M +G
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLGDAK----TYGILINGLCKARKTGLAIKLHEKM--KGNCKG 1083
Query: 249 PT-TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TY K G +A++++ +MI +G PD + Y L+ LC+ +L A++
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
KEM+ RG D+ T LIH L R + E + M+ RG P TF L D K
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203
Query: 368 GMTALAQKLCNVMSSVPRSMELL 390
G AQ++ +M + ++L
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDIL 1226
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 7/191 (3%)
Query: 213 TMVTYTSLVKGYCKAG--DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
++ + V+ C+ G L A K+ + +P T+N+ +K G
Sbjct: 908 SLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFP 967
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+YRK+ + G PD T +IL+ C + V RG + D T T L+ +
Sbjct: 968 MYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVW 1027
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL-----CNVMSSVPR 385
+A F++M ++GL+ T+ L + K T LA KL N V
Sbjct: 1028 MENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFT 1087
Query: 386 SMELLDSRCKD 396
++D+ CKD
Sbjct: 1088 YGMIIDALCKD 1098
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 168/352 (47%), Gaps = 11/352 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PDF+ T+ +I + G V A F +MV K + + L+D CK+G
Sbjct: 391 PDFI---TYTAVICGLCQTGRVMEADKLFH-----EMVCKRLEPDEVTYTALIDGYCKEG 442
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++K A + + L P + Y L +G + V A EM ++ + N+ T
Sbjct: 443 KMKEA--FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 500
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +LV G C+ +D+A++L+K+M G P+A+ Y T++D ++ ++ + L
Sbjct: 501 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 560
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E PT+VT+ L+ G+C +G LE K+LK M+ +G +P+ TTYN + + +
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 620
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+YR M G PD TY+IL+K CK + A + ++M +G ++ + + LI
Sbjct: 621 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 680
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ KF EA FE M R GLV + D G L +LC+
Sbjct: 681 KGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCD 732
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 17/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +L K + A +L + I PD V + LI + + G V +A F+
Sbjct: 329 VILLLCKTGKVAEAERVLREMISEGIAPDGV---IYTTLIDGFCKLGNVSSAYRLFDEMQ 385
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH----KRKELDQSWAPTVRVYNILL 116
+ +F + + ++ LC+ GRV A + FH KR E D+ Y L+
Sbjct: 386 KRKISPDFIT----YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV------TYTALI 435
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ + +K+A +M + +TPN+VTY L +G C+ VD A L+ EM ++G+E
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
N YN++++GL +AG ++ +M+ V P VTYT+L+ YCK+ ++ A ++
Sbjct: 496 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 555
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L+ M+ R P+ T+N F G +ED L + M+E G P+ TY+ L+K C
Sbjct: 556 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 615
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ + ++ + M +G D +T +LI C+ EA DM+ +G +
Sbjct: 616 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 675
Query: 357 FKRLNDEFKKR 367
+ L F KR
Sbjct: 676 YNALIKGFYKR 686
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ C+ G ++ + + + + P YN ++ ++ V +AER E
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQ--IKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E + P+ V Y TL++G+C+L V A RL EM+K I P+ I Y VI GL + GR
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P VTYT+L+ GYCK G ++ A + M+ G P+ TY
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+V+ A L +M G + TY+ L+ LCK +D A+++ K+M+ G
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T L+ C+ + A M+ R L P +TF L + F GM +
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Query: 375 KL 376
KL
Sbjct: 589 KL 590
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 157/306 (51%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+ SLC+ GRV A + + EL + P V Y+ ++NG+ + ++ + E
Sbjct: 256 YNIITHSLCQLGRVVEAHQLL-LQMEL-RGCIPDVISYSTVINGYCQVGELQRVLKLIEE 313
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + + PN TY ++ C+ +V A R+++EM EGI P+ ++Y T+IDG + G
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + P +TYT+++ G C+ G + A K+ M+ + P TY
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K GK+++A +L+ +M++ G TP+ +TY L LCK ++D A ++ EM +G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++++ T L++ LC+ D+A +DM G P +T+ L D + K A
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553
Query: 375 KLCNVM 380
+L M
Sbjct: 554 ELLRQM 559
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 12/333 (3%)
Query: 49 VEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT 108
VE I+T+ K++ S +F+I L + G + A + F K L+ +
Sbjct: 168 VEQLIYTY---------KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKM--LNYGLLIS 216
Query: 109 VRVYNILLNGWFRS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
V N+ ++ +K A + ++E + V N +Y + C+L RV A +L+
Sbjct: 217 VDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLL 276
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+M G P+ I Y+TVI+G + G + V ++E + P TY ++ CK
Sbjct: 277 LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKT 336
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G + A ++L+ MIS G P Y F K G V A L+ +M + +PD +TY
Sbjct: 337 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 396
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
++ LC+ ++ A ++ EM C+ + D T T LI C+ K EA + M++
Sbjct: 397 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 456
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
GL P+ +T+ L D K G A +L + M
Sbjct: 457 MGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 50/329 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI Y + G ++ A F N + + + L D LCK G
Sbjct: 426 PDEV---TYTALIDGYCKEGKMKEA---FSLHNQM-LQMGLTPNIVTYTALADGLCKCGE 478
Query: 88 VKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
V A+E H+ RK L+ + + YN L+NG ++ N+ A + +M P+ V
Sbjct: 479 VDTANELLHEMCRKGLELN----IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 534
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL++ YC+ R + RA L+++M ++P + +N +++G +G E+ +++
Sbjct: 535 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 594
Query: 206 L---------------------------------VCEPG--PTMVTYTSLVKGYCKAGDL 230
L +C G P TY L+KG+CKA ++
Sbjct: 595 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM 654
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + + M+ +GF + ++YN + F K K +A L+ +M G DR Y+I
Sbjct: 655 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714
Query: 291 LKILCKEDKLDLAIQVSKEM--KCRGCDI 317
I E K++L +++ E KC DI
Sbjct: 715 ADINYDEGKMELTLELCDEAIEKCLVGDI 743
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK-FGKVEDAMNLYRKMIESGYTPDR 284
+AG L+ A K+ M++ G L S + N F + S+ ++ A+ ++ + E G +
Sbjct: 194 EAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNT 253
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+Y+I+ LC+ ++ A Q+ +M+ RGC D+ + + +I+ C++ + E+
Sbjct: 254 ASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEE 313
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCK 395
M +GL P+ T+ + K G A A+++ M S P + L+D CK
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 370
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 188/413 (45%), Gaps = 48/413 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ L K K + +A L ++ G E PD T ILI + G + TF F
Sbjct: 16 IVGSLVKMKHYPTAISLFKQMQVKGIE-PDLF---TLNILINCFCHLGQM-----TFSFT 66
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
++K + L+ LC +G VK S +FH K + Q + Y LLNG
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKK-SLHFHD-KVVAQGFQMDQVSYATLLNG 124
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + A + + + PNVV Y T+++G C+ + V+ A L EM GI PN
Sbjct: 125 LCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPN 184
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFL-----------------VCEPG---------- 211
I Y+T+I G AG+ E G++ + +C+ G
Sbjct: 185 VITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLA 244
Query: 212 --------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +V+Y +L+ GYC G+++ A ++ M+ +G P+ +YN K
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSK 304
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+V++AMNL R+++ P+ +TY L+ CK ++ A+ + KEM RG D+ T T
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
L+ LC+ D+A+A F M RG+ P+ T+ L D K G AQKL
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 165/317 (52%), Gaps = 6/317 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + AG + A F N + ++KN + + IL+D+LCK+G+VK A
Sbjct: 187 TYSTLIYGFCLAGQLMEA---FGLLNEM-ILKNINPNVYTYTILMDALCKEGKVKEAKNL 242
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P V YN L++G+ V++A++ + M ++ V PNV +Y +++
Sbjct: 243 LAVMTK--EGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +RVD A+ L++E+ + + PN + Y+++IDG + GR +++ +
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYTSL+ CK +L+ A+ + M RG P+ TY K G+ ++A L++
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQH 420
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ G + TY++++ LCKE LD A+ + +M+ GC D T ++I L +
Sbjct: 421 LLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQ 480
Query: 335 FDEASAEFEDMIRRGLV 351
D+A +MI + L+
Sbjct: 481 NDKAEKLLHEMIAKDLL 497
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 152/306 (49%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C G++ A ++ + ++ P V Y IL++ + VK+A+
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEM--ILKNINPNVYTYTILMDALCKEGKVKEAKNLLAV 245
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M KE V PNVV+Y TL++GYC + V A ++ M ++G+ PN YN +ID L ++ R
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ L P VTY+SL+ G+CK G + A +LK M RG TY
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++ A L+ KM E G P++ TY L+ LCK + A ++ + + +G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C I++ T ++I LC+ DEA A M G +P +TF+ + ++ A+
Sbjct: 426 CRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAE 485
Query: 375 KLCNVM 380
KL + M
Sbjct: 486 KLLHEM 491
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 6/305 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ ++D LCK V A + + E+D + P V Y+ L+ G+ + + +A
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLY---SEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM +N+ PNV TY L++ C+ +V A L+ M KEG++PN + YNT++DG
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G + M + P + +Y ++ CK+ ++ A +L+ ++ + +P+ TY
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ F K G++ A++L ++M G D +TY LL LCK LD A + +MK
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM--T 370
RG + T T LI LC+ + A F+ ++ +G + T+ + K GM
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDE 448
Query: 371 ALAQK 375
ALA K
Sbjct: 449 ALAMK 453
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 131/275 (47%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + +N ++ + K+ A + +M+ + + P++ T L+ +C L ++ +
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G +PN I NT++ GL G ++ ++ + V+Y +L+ G C
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+ A K+L+M+ R P+ YN K V +A +LY +M G P+ +
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ C +L A + EM + + ++ T T+L+ LC+ K EA M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ G+ P+ +++ L D + G A+++ + M
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTM 281
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%)
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
TP ++ + +V +++ AI L K+M+ +GIEP+ N +I+ G+
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ + L P +T +L+KG C G+++ + ++++GF +Y
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G+ A+ L R + + P+ + Y+ ++ LCK+ ++ A + EM RG ++
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T + LI+ C + EA +MI + + P+ T+ L D K G A+ L VM
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 381 S 381
+
Sbjct: 247 T 247
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 24/251 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K+K D A LL + + + VP+ V T+ LI + + G + +A
Sbjct: 296 MIDRLCKSKRVDEAMNLLREVLHKNMVPNTV---TYSSLIDGFCKLGRITSA-------- 344
Query: 61 NLDMVKNF-----DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
LD++K + + LLD+LCK + A+ F K KE + P Y L
Sbjct: 345 -LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE--RGIQPNKYTYTAL 401
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++G + K+A++ + + + NV TY ++ G C+ +D A+ + +M + G
Sbjct: 402 IDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGC 461
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+A+ + +I L E + ++ ++ + ++ + G + + A K
Sbjct: 462 IPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI----AKDLLRFRDF-HGERSPNENDKAEK 516
Query: 236 ILKMMISRGFL 246
+L MI++G L
Sbjct: 517 LLHEMIAKGLL 527
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%)
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L+ P ++ + +V K A + K M +G P T N F G+
Sbjct: 1 MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+ + + K+++ GY P+ +T + L+K LC + ++ ++ ++ +G +D +
Sbjct: 61 MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120
Query: 325 LIHLLCRM 332
L++ LC++
Sbjct: 121 LLNGLCKI 128
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 189/408 (46%), Gaps = 25/408 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +FD A+ L+ + + VPD T+ +I A VE A F+ +
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPD---TSTYSKVITFLCHATKVEKAFLLFQ---EM 249
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MV + IL+DS CK G ++ A F + + + S PTV Y L++ + ++
Sbjct: 250 KMV-GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS--PTVVTYTALIHAYLKA 306
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M PN VTYG LV+G C+ + +A + ++
Sbjct: 307 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 366
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ + PN + Y ++DGL +A + + +++ L P + Y +L+ G+CK
Sbjct: 367 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 426
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG ++ A ++ M G+LPS TY K G+++ AM + +M++ TP+ +T
Sbjct: 427 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 486
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LC+ + + A+++ M+ +GC ++ T T LI L + K D + F M
Sbjct: 487 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 546
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
R+G P+Y+T++ L + G+ A+ L M L RC
Sbjct: 547 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 594
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 191/437 (43%), Gaps = 58/437 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + + A+ L + PD T+ ILI + +AG++E A W FE
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVY---TYTILIDSFCKAGLIEQAQWLFEEMR 285
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +L L K +V A++ FH+ +D P Y L++G
Sbjct: 286 SVGCSPTVVTYTALIHAYL----KAKQVPQANDIFHRM--VDAGCRPNDVTYGALVDGLC 339
Query: 121 RSKNVKDAERFWLEM----------------RKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
++ N+ A + ++ + + PNVVTYG LV+G C+ +VD A
Sbjct: 340 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 399
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ M G EPN IVY+ +IDG +AG+ + + + C P++ TYTSL+
Sbjct: 400 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 459
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
K G L+ A K+L M+ P+ TY + G+ E A+ L M E G +P+
Sbjct: 460 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 519
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA------ 338
+TY L+ L K K+DL++ + +M +GC + T +LI+ LC D+A
Sbjct: 520 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 579
Query: 339 --------------------SAEF-------EDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
S F E+M G VP + L D F K G
Sbjct: 580 MKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 639
Query: 372 LAQKLCNVMSSVPRSME 388
+A +L M VP S++
Sbjct: 640 IAMELHKEMMEVPSSVK 656
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 45/428 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A FD A L +P+ V+ T + + + G + I
Sbjct: 48 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII------- 100
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----SWAPTVRVYNILL 116
N+ M + + SLF L+ S C + +Y + K L++ P VYNI +
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNE------KDYAYAYKLLNRMTTCGCPPGYVVYNIFI 154
Query: 117 NGW-----FRSKNVKD-AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
S ++ D AE+ + EM N N V C + + D+A +L+KEM
Sbjct: 155 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 214
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
++G P+ Y+ VI L A + E+ + + + P + TYT L+ +CKAG +
Sbjct: 215 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 274
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A + + M S G P+ TY + K +V A +++ +M+++G P+ +TY L
Sbjct: 275 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 334
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLD----------------TSTMLIHLLCRMYK 334
+ LCK + A +V ++ D D T L+ LC+ +K
Sbjct: 335 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 394
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSME 388
D A + M+ G P+++ + L D F K G AQ++ C + SV
Sbjct: 395 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 454
Query: 389 LLDSRCKD 396
L+D KD
Sbjct: 455 LIDRMFKD 462
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 6/286 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK G++ +A E F + + + P+V Y L++ F+ + A +
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVFLQMTKC--GYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 473
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K++ TPNVVTY +++G CR+ ++A++L+ M ++G PN + Y +IDGL +AG
Sbjct: 474 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 533
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + + P VTY L+ C AG L+ A +L M + Y
Sbjct: 534 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 593
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
+ FSK ++ + +M G P Y +L+ K +L++A+++ KEM
Sbjct: 594 CAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 651
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D D LI LC + +EA + +M RRG VP F
Sbjct: 652 PSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 697
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 15/262 (5%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T G C+ R A+ +++ +E + + ++ +I GL+EA F+E + R
Sbjct: 12 TVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P +VTY +L+ G+ K L +I+ MM++ G P+P+ +N +
Sbjct: 69 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK------LDLAIQVSKEMKCRGCDIDL 319
A L +M G P + Y+I + +C ++K LDLA ++ EM C ++
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 188
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL------NDEFKKRGMTALA 373
LC + KFD+A ++M+R+G VP T+ ++ + +K +
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248
Query: 374 QKLCNVMSSVPRSMELLDSRCK 395
K+ V V L+DS CK
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCK 270
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ +E+ + V ++ G D A+ + MR PN + Y T++ G ++ +
Sbjct: 33 IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 92
Query: 195 FEEVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
++ + C P P++ + SLV YC D A K+L M + G P Y
Sbjct: 93 LGWCKRIINMMMTEGCNPNPSL--FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 150
Query: 253 NYFFRYFSKFGKVED------AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
N F K+ A +Y +M+ + +++ + LC K D A Q+
Sbjct: 151 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 210
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
KEM +G D T + +I LC K ++A F++M G+ P T+ L D F K
Sbjct: 211 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 270
Query: 367 RGMTALAQKLCNVMSSV 383
G+ AQ L M SV
Sbjct: 271 AGLIEQAQWLFEEMRSV 287
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 128/316 (40%), Gaps = 48/316 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA + DSA + L +P S T+ LI R + G ++ A+
Sbjct: 420 LIDGFCKAGKIDSAQEVFLQMTKCGYLP---SVHTYTSLIDRMFKDGRLDLAMKVLS--- 473
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M+K+ + ++D LC+ G + A + +E + +P V Y L++G
Sbjct: 474 --QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE--KGCSPNVVTYTALIDGL 529
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE------ 173
++ + + + +M ++ +PN VTY L+ C +D+A L+ EM++
Sbjct: 530 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 589
Query: 174 ---------------------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
G P A VY +ID +AGR E ++ + + +
Sbjct: 590 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE-IAMELHKEM 648
Query: 207 VCEPGPTMV---TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P Y SL++ C A +E A ++ M RGF+P + + + +
Sbjct: 649 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 708
Query: 264 KVEDAMNLYRKMIESG 279
K ++A+ L + G
Sbjct: 709 KWDEALQLCYGICHEG 724
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A ++ +L+D K GR++ A E + E+ S +Y L+ + V++A R
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ EM + P + + L++G +++ D A++L + EG+
Sbjct: 682 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 275 MIESGYTPDRLTYHILLKILCKE----DKLDLAIQVSKEMKCRGCDIDLDT--STMLIHL 328
M ESG+ DR T LCKE D LD+ + +E D LDT T +I
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDM---IERE------DFKLDTVLCTHMISG 51
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
L FDEA + M +P+ +T++ L F K+ +++ N+M
Sbjct: 52 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM 103
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 8/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
++ LI AG + A+ F DM + N + +L+ +L GR A
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFA-----DMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F++ KE + P V Y +L++G + + +A + EM ++ + P+VVTY L++G
Sbjct: 321 LFNEMKE--KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC+ +D A ++ M PN YN +I GL + + + ++ + L + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++TY SL+ G CK DLE A ++L +M G +P TY+ F K G+VE+A L+
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+ G + + Y L+ CK K+D+A + + M C + T +LI LC+
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
K EAS+ M+ G+ P +T+ L E K G A K+ N M S+
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + A E + S P R YN L+ G + + V A +
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLME--SNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++P+++TY +L+ G C++ ++ A RL+ M + G+ P+ Y+ ID L + GR
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE + + V YT+L+ GYCK G ++ A +L+ M++ LP+ TYN
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K K+++A +L KM+ G P +TY IL+ + K+ D A++V M G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D+ T T +H +E M G++P +T+ L D + + G+T A
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 196/470 (41%), Gaps = 101/470 (21%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A +L + +P V T+ LI Y + GM++ A FE
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVV---TYNALIDGYCKEGMIDDA---FEI-- 391
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD++++ G + + L+ LCK+ +V A +K L++ +P++ YN L++G
Sbjct: 392 -LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM--LERKLSPSLITYNSLIHG 448
Query: 119 WFRSKNVKDAERFWLEMRKENVTP-----------------------------------N 143
+ +++ A R M + + P N
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V Y L++GYC++ ++D A L++ M + PN+ YN +I+GL + + +E S ++
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L PT+VTYT L+ K G + A K+ M+S G+ P TY F + G
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628
Query: 264 KVEDAMNLYRKMIESGYTPDRLTY-----------------------------------H 288
+E+ ++ KM E G PD +TY
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688
Query: 289 ILLKILCKEDKL------------------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
IL+K L E+++ ++A+++ ++M GC ID+ LI C
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFC 748
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + +EA M RG+ P + L D K G+ A A +L + M
Sbjct: 749 QQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 798
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 131/294 (44%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ CK G V A Y K + P Y L+ G R+K V +A +L
Sbjct: 197 FNAMVNGYCKIGNVVEAELY--ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLI 254
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ N V+Y L+ G C R++ A++L +M ++ P Y +I L +GR
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + P + TYT L+ G CK ++ A K+L M +G +PS TYN
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K G ++DA + M + P+ TY+ L+ LCK+ K+ A+ + +M R
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
L T LIH C++ + A M GLVP T+ D K G
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 11/309 (3%)
Query: 78 LLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ S C V E F K + + + PT+R YN +L + + + + +LE+
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++PN+ T+ +V GYC++ V A ++ + G+ P+ Y ++I G R +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG---HCRNK 243
Query: 197 EVSGMMERFLV-----CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
V E FL+ C+ V+YT+L+ G C+AG + A K+ M P+ T
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNE--VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRT 301
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y S G+ +A+NL+ +M E G P+ TY +L+ LCKE+K+D A ++ EM
Sbjct: 302 YTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G + T LI C+ D+A + M P+ T+ L K+
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421
Query: 372 LAQKLCNVM 380
A L N M
Sbjct: 422 KAMALLNKM 430
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 135/305 (44%), Gaps = 23/305 (7%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-----------------RKENV--- 140
L + V Y+ +LN R++ + AE+ + M RK N
Sbjct: 93 LRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGE 152
Query: 141 ---TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P + Y T++ + +D + E+ I PN +N +++G + G E
Sbjct: 153 FKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVE 212
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + P TYTSL+ G+C+ ++ A ++ +M +G + +Y
Sbjct: 213 AELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIH 272
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ G++ +A+ L+ M E P TY +L+ L + A+ + EMK +GC+
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T T+LI LC+ K DEA +M +GL+P +T+ L D + K GM A ++
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392
Query: 378 NVMSS 382
++M S
Sbjct: 393 DLMES 397
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 133/304 (43%), Gaps = 20/304 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ + K G A + F+ L + P V Y L+ +F +++ + +
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSL--GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +E + P++VTY L++GY RL RA +K M G +P+ + + +I L R
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR 699
Query: 195 FEE---------VSGMMERFL-------VCEPGPTM--VTYTSLVKGYCKAGDLEGASKI 236
+E VS +E + + E G T+ Y +L+ G+C+ LE A +
Sbjct: 700 MKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGL 759
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M RG PS YN K G +A+ L M+E+G P +Y +L+ L
Sbjct: 760 VHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYI 819
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E + A V + G + D +LI L + DE S + M +G P+ LT
Sbjct: 820 EGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLT 879
Query: 357 FKRL 360
+ L
Sbjct: 880 YSLL 883
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 42/276 (15%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSL 82
+PD V T+ +LI YAR G+ A F+F + D+G + IL+ +L
Sbjct: 646 LPDLV---TYTVLIDGYARLGLTHRA---FDFLKCM-----VDTGCKPSLYIVSILIKNL 694
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
+ R+K R E+ Y I L + + +M + T
Sbjct: 695 SHENRMK------ETRSEIGIDSVSNTLEYEIAL-------------KLFEKMVEHGCTI 735
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----V 198
+V YG L+ G+C+ R++ A LV M++ G+ P+ +YN+++D + G + E V
Sbjct: 736 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 795
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
M+E L+ P + +Y LV G G E A + ++S G+ +
Sbjct: 796 DAMVENGLL----PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
K V++ L M E G P+ LTY +L++ L
Sbjct: 852 LLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 191/382 (50%), Gaps = 18/382 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L KA++F S L+ + G E + D F I I+ +A AG ++ A+ FE
Sbjct: 227 MVHILGKARQFQSMVALIQEM--GKE--GALCMDAFKIAIKSFAAAGEIKNAVGVFEMMR 282
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
FD G F LL +L ++G + A++ F + ++ +AP +R Y L+ W
Sbjct: 283 ----THGFDDGVESFNCLLVALAQEGLGREANQVFDRMRD---RYAPDLRSYTALMLAWC 335
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++N+ +A R W EM + + P+VV + T++EG R +R A+++ + M+ +G PN
Sbjct: 336 NARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVW 395
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I + G+ + E P + TYT L+ GY A ++ + +L+ M
Sbjct: 396 TYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEM 455
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK--ILCKED 298
+G P TYN + + +DA +Y+KMI+ G P TY++++K L +
Sbjct: 456 TQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRN 515
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ + V +EM +G D+++ T+ I+ R + +EA E+MI++G+ + +
Sbjct: 516 YM-MGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
Query: 359 RLNDEFKKRG----MTALAQKL 376
+ +F K G + LAQK+
Sbjct: 575 KFAADFSKAGKPDILYELAQKV 596
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 24/260 (9%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V +T + + R R A+ FE L K + +L+ CK+G+
Sbjct: 357 PDVVVHNTMIEGLLRGQRR---PEAVKMFE----LMKAKGPAPNVWTYTMLIRDHCKRGK 409
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A F + + D P V Y LL G+ +K + EM ++ P+ TY
Sbjct: 410 MDMAMRCFEEMQ--DVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTY 467
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--------FEEVS 199
L++ D A R+ K+M K+G+EP YN ++ GR +EE
Sbjct: 468 NALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEE-- 525
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
M R +C P + +YT + G+ + G E A K ++ MI +G YN F F
Sbjct: 526 --MHRKGIC---PDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADF 580
Query: 260 SKFGKVEDAMNLYRKMIESG 279
SK GK + L +K+ +G
Sbjct: 581 SKAGKPDILYELAQKVKFTG 600
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 184/384 (47%), Gaps = 14/384 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++ D W LL D V+ + IRR A A + A+ F+
Sbjct: 123 MIDLLGKMRQIDQMWDLLSDM----HCRGLVTVEAAATSIRRLAGARRWKDAVLLFDKLG 178
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +N ++ +LLD+LCK+ +V+ A + F L P +NI ++GW
Sbjct: 179 DMGLERNTET----MNVLLDALCKEKKVEVARKVF---LVLSPHIQPDAYTFNIFVHGWC 231
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A EM+ + P+V+TY T++E YC+ ++ M EG PN I
Sbjct: 232 SARRIDEAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVI 291
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ L + FEE + R P + Y SL+ KAG L AS++ ++
Sbjct: 292 TYTMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVE 351
Query: 241 ISRGFLP-SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +P S TYN F EDA+++ ++M PD TY LL++
Sbjct: 352 MPMNGVPRSLATYNTMISVFCYKDLDEDALSVLKEMETQSCKPDLQTYRPLLRLFLSRRG 411
Query: 300 LDLAIQ--VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D ++ +++ M +DLDT T+LIH LCR+ + D A F++M+ +VP Y T
Sbjct: 412 QDDTVRNLLNELMNKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRTC 471
Query: 358 KRLNDEFKKRGMTALAQKLCNVMS 381
+ L E +++ M +++ N M+
Sbjct: 472 ELLLSEAQRKKMEEWVERIQNYMT 495
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T N K KVE A ++ ++ PD T++I + C ++D A+ +EM
Sbjct: 188 TMNVLLDALCKEKKVEVARKVFL-VLSPHIQPDAYTFNIFVHGWCSARRIDEAMWTIEEM 246
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
K +G + T T ++ C+ + F + M G P+ +T+ + K M
Sbjct: 247 KAQGFPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIMTSLAKCHMF 306
Query: 371 ALAQKLCNVMSS 382
A + + M S
Sbjct: 307 EEALSVSHRMKS 318
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ CK G + + KR ++ P V Y++L+NG + + DA + +LE
Sbjct: 263 FNTLINGYCKSGNLDQG--FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLE 320
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VT+ TL+ G+C R D + + ++M ++G++P+ I YNT+I+GL + G
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ P TYT L+ G CK GDLE A +I K M+ G +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G+V +A R+M+E+G PD TY +++ CK+ + ++ KEM+C G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ T +L++ LC+ + A+ + M+ G+VP +T+ L + K G
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 186/392 (47%), Gaps = 23/392 (5%)
Query: 13 SAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGA 72
S + +L+ G H+ S F +L+ Y +G AI F ++ F S
Sbjct: 140 SVFTSVLEARGTHQ-----SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCG 194
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
LF D L K A ++ + LD + P V +N+L++ + + +A+ +
Sbjct: 195 YLF----DRLMKLNLTSPAWAFY--EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
E+ K + P VV++ TL+ GYC+ +D+ RL + M + + P+ Y+ +I+GL +
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308
Query: 193 GRFEEVSGMMERFL-VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ ++ + + FL +C+ G P VT+T+L+ G+C G + +I + M+ +G P
Sbjct: 309 GQLDDANKL---FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDV 365
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN K G + +A L +M + G PD+ TY +L+ CKE L+ A+++ KE
Sbjct: 366 ITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKE 425
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M G ++D T LI CR + EA +M+ G+ P T+ + F K+G
Sbjct: 426 MVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD 485
Query: 370 TALAQKLCNVM---SSVPRSME---LLDSRCK 395
KL M VP + LL+ CK
Sbjct: 486 VKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCK 517
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 15/300 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A L L+ VP+ V TF LI + G + + ++
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDV---TFTTLINGHCVTGRADLGMEIYQQM- 356
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + L++ LCK G ++ A + + + + P Y +L++G
Sbjct: 357 ---LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ--RGLKPDKFTYTMLIDGCC 411
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +++ A EM KE + + V + L+ G+CR +V A R ++EM + GI+P+
Sbjct: 412 KEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VI G + G + +++ P +VTY L+ G CK G ++ A+ +L M
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL---LKILCKE 297
++ G +P TYN K G ED L E G D +Y L L+ CKE
Sbjct: 532 LNLGVVPDDITYNILLEGHCKHGNREDFDKLQS---EKGLVQDYGSYTSLIGDLRKTCKE 588
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+ + L+ Y AI+ + +RK ++ + D L++ E
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L C P + + L+ CK + A + + RG P+ ++N + K G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
++ L R M+E+ PD TY +L+ LCKE +LD A ++ EM RG + T T
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
LI+ C + D ++ M+R+G+ P +T+ L + K G A+KL V+
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL--VIEMTQ 393
Query: 385 RSME--------LLDSRCKD 396
R ++ L+D CK+
Sbjct: 394 RGLKPDKFTYTMLIDGCCKE 413
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 8/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
++ LI AG + A+ F DM + N + +L+ +L GR A
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFA-----DMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F++ KE + P V Y +L++G + + +A + EM ++ + P+VVTY L++G
Sbjct: 321 LFNEMKE--KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC+ +D A ++ M PN YN +I GL + + + ++ + L + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++TY SL+ G CK DLE A ++L +M G +P TY+ F K G+VE+A L+
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+ G + + Y L+ CK K+D+A + + M C + T +LI LC+
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
K EAS+ M+ G+ P +T+ L E K G A K+ N M S+
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 2/296 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + A E + S P R YN L+ G + + V A +
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLME--SNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++P+++TY +L+ G C++ ++ A RL+ M + G+ P+ Y+ ID L + GR
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE + + V YT+L+ GYCK G ++ A +L+ M++ LP+ TYN
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K K+++A +L KM+ G P +TY IL+ + K+ D A++V M G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
D+ T T +H +E M G++P +T+ L D + + G+T
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 13/354 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A +L + +P V T+ LI Y + GM++ A FE
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVV---TYNALIDGYCKEGMIDDA---FEI-- 391
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD++++ G + + L+ LCK+ +V A +K L++ +P++ YN L++G
Sbjct: 392 -LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM--LERKLSPSLITYNSLIHG 448
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +++ A R M + + P+ TY ++ C+ RV+ A L ++ +G++ N
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++Y +IDG + G+ + ++ER L P TY L++G CK ++ AS ++
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M++ G P+ TY K G + A+ ++ M+ GY PD TY L +
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L+ V +M G DL T T+LI R+ A + M+ G P
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 131/294 (44%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ CK G V A Y K + P Y L+ G R+K V +A +L
Sbjct: 197 FNAMVNGYCKIGNVVEAELY--ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLI 254
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ N V+Y L+ G C R++ A++L +M ++ P Y +I L +GR
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + P + TYT L+ G CK ++ A K+L M +G +PS TYN
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K G ++DA + M + P+ TY+ L+ LCK+ K+ A+ + +M R
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
L T LIH C++ + A M GLVP T+ D K G
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 163/391 (41%), Gaps = 42/391 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + +SA+ LL VPD + T+ + I + G VE A F+
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPD---QWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K + ++ L+D CK G++ A Y + L+ + P YN+L+ G
Sbjct: 502 ----AKGVKANEVIYTALIDGYCKVGKIDVA--YSLLERMLNDACLPNSYTYNVLIEGLC 555
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K +K+A +M V P VVTY L+ + D A+++ M G +P+
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
Y + G EEV ++ + + E G P +VTYT L+ GY + G A LK
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAK--MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVED-----------------------------AM 269
M+ G PS + + S ++++ A+
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIAL 733
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ KM+E G T D Y L+ C++++L+ A + MK RG D L+
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 793
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C++ + EA + M+ GL+P ++K L
Sbjct: 794 CKLGVYAEAVRLVDAMVENGLLPLLESYKLL 824
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 10/281 (3%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ PT+R YN +L + + + + +LE+ ++PN+ T+ +V GYC++ V A
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV-----CEPGPTMVTYTS 219
++ + G+ P+ Y ++I G R + V E FL+ C+ V+YT+
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHC---RNKGVDNAYEVFLIMPQKGCQRNE--VSYTN 269
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G C+AG + A K+ M P+ TY S G+ +A+NL+ +M E G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ TY +L+ LCKE+K+D A ++ EM +G + T LI C+ D+A
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ M P+ T+ L K+ A L N M
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 23/298 (7%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEM-----------------RKENV------TPNV 144
V Y+ +LN R++ + AE+ + M RK N P +
Sbjct: 100 NVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTL 159
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
Y T++ + +D + E+ I PN +N +++G + G E +
Sbjct: 160 RCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASK 219
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P TYTSL+ G+C+ ++ A ++ +M +G + +Y + G+
Sbjct: 220 IVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGR 279
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+ +A+ L+ M E P TY +L+ L + A+ + EMK +GC+ ++ T T+
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI LC+ K DEA +M +GL+P +T+ L D + K GM A ++ ++M S
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 35/248 (14%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ + K G A + F+ L + P V Y L+ +F +++ + +
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSL--GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +E + P++VTY L++GY RL RA +K M G +P+ + + +I L R
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR 699
Query: 195 FEEVSG-----------------------------MMERFLVCEPGPTM--VTYTSLVKG 223
+E + E+ + E G T+ Y +L+ G
Sbjct: 700 MKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMV--EHGCTIDVSIYGALIAG 757
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+C+ LE A ++ M RG PS YN K G +A+ L M+E+G P
Sbjct: 758 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 817
Query: 284 RLTYHILL 291
+Y +L+
Sbjct: 818 LESYKLLV 825
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 136/339 (40%), Gaps = 61/339 (17%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSL 82
+PD V T+ +LI YAR G+ A F+F + D+G + IL+ +L
Sbjct: 646 LPDLV---TYTVLIDGYARLGLTHRA---FDFLKCM-----VDTGCKPSLYIVSILIKNL 694
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
+ R+K R E+ V +I + W ++ + A + + +M + T
Sbjct: 695 SHENRMK------ETRSEIGIDSVSNVNSVDIA-DVW-KTLEYEIALKLFEKMVEHGCTI 746
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V YG L+ G+C+ R++ A LV M++ G+ P+ +YN+++D
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD--------------- 791
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
C CK G A +++ M+ G LP +Y
Sbjct: 792 ----CC----------------CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIE 831
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G E A ++ ++ GY D + + +L+ L K D +D ++ M+ + D +
Sbjct: 832 GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIA 891
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
L R+ + ED RGL ++ +L+
Sbjct: 892 CA---ALMRLAAANSTKGALEDHELRGLSVNHGELTQLS 927
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 189/408 (46%), Gaps = 25/408 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +FD A+ L+ + + VPD T+ +I A VE A F+ +
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPD---TSTYSKVITFLCHATKVEKAFLLFQ---EM 314
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MV + IL+DS CK G ++ A F + + + S PTV Y L++ + ++
Sbjct: 315 KMV-GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS--PTVVTYTALIHAYLKA 371
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M PN VTYG LV+G C+ + +A + ++
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ + PN + Y ++DGL +A + + +++ L P + Y +L+ G+CK
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG ++ A ++ M G+LPS TY K G+++ AM + +M++ TP+ +T
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LC+ + + A+++ M+ +GC ++ T T LI L + K D + F M
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
R+G P+Y+T++ L + G+ A+ L M L RC
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 659
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 191/437 (43%), Gaps = 58/437 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + + A+ L + PD T+ ILI + +AG++E A W FE
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVY---TYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +L L K +V A++ FH+ +D P Y L++G
Sbjct: 351 SVGCSPTVVTYTALIHAYL----KAKQVPQANDIFHRM--VDAGCRPNDVTYGALVDGLC 404
Query: 121 RSKNVKDAERFWLEM----------------RKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
++ N+ A + ++ + + PNVVTYG LV+G C+ +VD A
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ M G EPN IVY+ +IDG +AG+ + + + C P++ TYTSL+
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
K G L+ A K+L M+ P+ TY + G+ E A+ L M E G +P+
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA------ 338
+TY L+ L K K+DL++ + +M +GC + T +LI+ LC D+A
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644
Query: 339 --------------------SAEF-------EDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
S F E+M G VP + L D F K G
Sbjct: 645 MKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704
Query: 372 LAQKLCNVMSSVPRSME 388
+A +L M VP S++
Sbjct: 705 IAMELHKEMMEVPSSVK 721
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 45/428 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A FD A L +P+ V+ T + + + G + I
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII------- 165
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----SWAPTVRVYNILL 116
N+ M + + SLF L+ S C + +Y + K L++ P VYNI +
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNE------KDYAYAYKLLNRMTTCGCPPGYVVYNIFI 219
Query: 117 NGW-----FRSKNVKD-AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
S ++ D AE+ + EM N N V C + + D+A +L+KEM
Sbjct: 220 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
++G P+ Y+ VI L A + E+ + + + P + TYT L+ +CKAG +
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A + + M S G P+ TY + K +V A +++ +M+++G P+ +TY L
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLD----------------TSTMLIHLLCRMYK 334
+ LCK + A +V ++ D D T L+ LC+ +K
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSME 388
D A + M+ G P+++ + L D F K G AQ++ C + SV
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519
Query: 389 LLDSRCKD 396
L+D KD
Sbjct: 520 LIDRMFKD 527
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 6/286 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK G++ +A E F + + + P+V Y L++ F+ + A +
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKC--GYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K++ TPNVVTY +++G CR+ ++A++L+ M ++G PN + Y +IDGL +AG
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + + P VTY L+ C AG L+ A +L M + Y
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
+ FSK ++ + +M G P Y +L+ K +L++A+++ KEM
Sbjct: 659 CAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 716
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D D LI LC + +EA + +M RRG VP F
Sbjct: 717 PSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 762
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 15/306 (4%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D + P+ YN L+ + V R EM + + T G C+ R
Sbjct: 33 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A+ +++ +E + + ++ +I GL+EA F+E + R P +VTY +L+
Sbjct: 93 DALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+ K L +I+ MM++ G P+P+ +N + A L +M G
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209
Query: 282 PDRLTYHILLKILCKEDK------LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
P + Y+I + +C ++K LDLA ++ EM C ++ LC + KF
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL------NDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
D+A ++M+R+G VP T+ ++ + +K + K+ V V L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329
Query: 390 LDSRCK 395
+DS CK
Sbjct: 330 IDSFCK 335
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 128/316 (40%), Gaps = 48/316 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA + DSA + L +P S T+ LI R + G ++ A+
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLP---SVHTYTSLIDRMFKDGRLDLAMKVLS--- 538
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M+K+ + ++D LC+ G + A + +E + +P V Y L++G
Sbjct: 539 --QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE--KGCSPNVVTYTALIDGL 594
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE------ 173
++ + + + +M ++ +PN VTY L+ C +D+A L+ EM++
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654
Query: 174 ---------------------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
G P A VY +ID +AGR E ++ + + +
Sbjct: 655 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE-IAMELHKEM 713
Query: 207 VCEPGPTMV---TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P Y SL++ C A +E A ++ M RGF+P + + + +
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 773
Query: 264 KVEDAMNLYRKMIESG 279
K ++A+ L + G
Sbjct: 774 KWDEALQLCYGICHEG 789
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A ++ +L+D K GR++ A E + E+ S +Y L+ + V++A R
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ EM + P + + L++G +++ D A++L + EG+
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 9/342 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP V+ +T L+ Y + G +AAI ++ + K ++ + + +D+LC
Sbjct: 265 VPTIVTYNT---LLNWYCKKGRYKAAIELIDYM----ICKGIEADVCTYNVFIDNLCTNH 317
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R +A Y +K + +P YN L+NG+ + + A + + EM K +++PN VT
Sbjct: 318 R--SAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 375
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G+C + + A+RL+ M G+ N + Y T+++GL + +FE ++ER
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V + + YT L+ G CK G L+ A +++ M G P TY+ F + G ++
Sbjct: 436 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + +M SG +++ Y L+ C+ + A++V M C G D T +L+
Sbjct: 496 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 555
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LCR K EA M R GLVP+ +T+ + + + G
Sbjct: 556 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 597
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 188/447 (42%), Gaps = 60/447 (13%)
Query: 4 VLAKAKEFDSAWCLL--LDKIGGHEVPDFVS-----------KDTFVILIRRYARAGMVE 50
+L KA+ +DSA +L L ++G F + F +LIR Y + GM++
Sbjct: 121 ILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 180
Query: 51 AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR 110
A+ TFE + F ++L S+ K R + F R+ D+ P V
Sbjct: 181 YAVETFELVG----LVGFKPSVYTCNMILASMVKDKRTELVWSLF--REMSDKGICPNVG 234
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV--- 167
+NIL+NG N+K A +M + P +VTY TL+ YC+ R AI L+
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294
Query: 168 --------------------------------KEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K+MRKE I PN + YNT+I+G V+ G+
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKI 354
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + + P VTY +L+ G+C GD E A ++L M + G + TY
Sbjct: 355 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTL 414
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K K E A L +M + + Y +L+ LCK LD A+Q+ M G
Sbjct: 415 LNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGV 474
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ D+ T + LI+ CR+ A M R GLV + + + L F + G A K
Sbjct: 475 NPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 534
Query: 376 LCNVMSSVPRSME------LLDSRCKD 396
+ VM+ + L+ S C+D
Sbjct: 535 VYAVMNCNGHGADHFTCNVLVSSLCRD 561
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 2/307 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ L+D L K G KAA +F + + + P +N +++ R + A F+
Sbjct: 726 MYTCLVDGLSKAGHPKAAFYFFEEM--MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFS 783
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
MR V PN+ TY L+ G+ + + + R + L M +EGI P+ + ++++I GL ++G
Sbjct: 784 TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 843
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ ++ + ++ T+ L+ Y ++G + A ++ M + G P TYN
Sbjct: 844 IPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYN 903
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F +K ++ + +M+E+G P Y L+ +C+ + A ++ EM+
Sbjct: 904 HIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEAL 963
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + ++ L K ++A + M+R L+P TF L F + A A
Sbjct: 964 GFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEA 1023
Query: 374 QKLCNVM 380
KL VM
Sbjct: 1024 LKLKGVM 1030
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 170/403 (42%), Gaps = 51/403 (12%)
Query: 13 SAWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
+A CL +G G P+ V + L+ ++AG +AA + FE +M+K
Sbjct: 706 TAVCLFGTAMGRGTLFPNHV---MYTCLVDGLSKAGHPKAAFYFFE-----EMMKKGTCP 757
Query: 72 ASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDA 128
++ F ++DS ++G++ A+++F + W P + YNILL+G+ + + +
Sbjct: 758 DTVAFNAIIDSCSRRGQMMKANDFFSTMRW----WGVCPNLATYNILLHGFSKKQALLRY 813
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEG----------------------------------- 153
+ M +E + P+ +T+ +L+ G
Sbjct: 814 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINK 873
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y ++ +A LV M G+ P+ YN + +GL + F E + ++ L P
Sbjct: 874 YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 933
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
Y +L+ G C+ GD++GA K+ M + GF + R GK EDAM +
Sbjct: 934 HAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 993
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M+ P T+ L+ C++ K+ A+++ M+ G +D+ +LI +C
Sbjct: 994 HMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANG 1053
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A +E+M R L P+ T+ L D +KL
Sbjct: 1054 DSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1096
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 150/344 (43%), Gaps = 14/344 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI--LLDSLCK 84
VP+ ++ D +I Y G A F+ DM+K S F LL LCK
Sbjct: 580 VPNSITYDC---IINGYGSIGDPLNAFSFFD-----DMIK-CGQHPSFFTYGSLLKGLCK 630
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
G + A ++ ++ + A +YN LL +S N+ +A + +M + NV P+
Sbjct: 631 GGNLVEAKKFLNRLHYIPG--AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688
Query: 145 VTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
TY +L+ G CR + A+ L M + + PN ++Y ++DGL +AG + E
Sbjct: 689 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 748
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P V + +++ + G + A+ M G P+ TYN FSK
Sbjct: 749 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ ++LY M+ G PD+LT+H L+ L K DL +++ +M G D T
Sbjct: 809 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 868
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+LI+ K +A M G+ P T+ + + K+
Sbjct: 869 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 912
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 153/399 (38%), Gaps = 52/399 (13%)
Query: 24 GHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
G+ D V+ D T+ LI + R G +++A + + + SG L +I+ +
Sbjct: 467 GNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEI--------ICRMYRSGLVLNKIIYST 518
Query: 82 L----CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L C+ G V A + + N+L++ R + +AE+F M +
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMN--CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 576
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ PN +TY ++ GY + A +M K G P+ Y +++ GL + G E
Sbjct: 577 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 636
Query: 198 VSGMMERFL-----------------VCEPG------------------PTMVTYTSLVK 222
+ R C+ G P TY+SL+
Sbjct: 637 AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 696
Query: 223 GYCKAGDLEGASKILKMMISRGFL-PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G C+ G A + + RG L P+ Y SK G + A + +M++ G
Sbjct: 697 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 756
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD + ++ ++ + ++ A M+ G +L T +L+H + +
Sbjct: 757 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 816
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ M+R G+ P LTF L K G+ L KL M
Sbjct: 817 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 855
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 2/240 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ + G+++ A + + L P YN + NG + +++ E
Sbjct: 867 FNILINKYSESGKMRKAFDLVNFMNTL--GVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 924
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P Y TL+ G CR+ + A +L EM G + + + ++ GL+ G+
Sbjct: 925 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ +++ L PT+ T+T+L+ +C+ + A K+ +M G YN
Sbjct: 985 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1044
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G A LY +M P+ TY +L+ + + L ++ +++ RG
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 189/408 (46%), Gaps = 25/408 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +FD A+ L+ + + VPD T+ +I A VE A F+ +
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPD---TSTYSKVITFLCHATKVEKAFLLFQ---EM 314
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MV + IL+DS CK G ++ A F + + + S PTV Y L++ + ++
Sbjct: 315 KMV-GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS--PTVVTYTALIHAYLKA 371
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M PN VTYG LV+G C+ + +A + ++
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ + PN + Y ++DGL +A + + +++ L P + Y +L+ G+CK
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG ++ A ++ M G+LPS TY K G+++ AM + +M++ TP+ +T
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LC+ + + A+++ M+ +GC ++ T T LI L + K D + F M
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
R+G P+Y+T++ L + G+ A+ L M L RC
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 659
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 191/437 (43%), Gaps = 58/437 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + + A+ L + PD T+ ILI + +AG++E A W FE
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVY---TYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +L L K +V A++ FH+ +D P Y L++G
Sbjct: 351 SVGCSPTVVTYTALIHAYL----KAKQVPQANDIFHRM--VDAGCRPNDVTYGALVDGLC 404
Query: 121 RSKNVKDAERFWLEM----------------RKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
++ N+ A + ++ + + PNVVTYG LV+G C+ +VD A
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ M G EPN IVY+ +IDG +AG+ + + + C P++ TYTSL+
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
K G L+ A K+L M+ P+ TY + G+ E A+ L M E G +P+
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA------ 338
+TY L+ L K K+DL++ + +M +GC + T +LI+ LC D+A
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE 644
Query: 339 --------------------SAEF-------EDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
S F E+M G VP + L D F K G
Sbjct: 645 MKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704
Query: 372 LAQKLCNVMSSVPRSME 388
+A +L M VP S++
Sbjct: 705 IAMELHKEMMEVPSSVK 721
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 45/428 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A FD A L +P+ V+ T + + + G + I
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII------- 165
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----SWAPTVRVYNILL 116
N+ M + + SLF L+ S C + +Y + K L++ P VYNI +
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNE------KDYAYAYKLLNRMTTCGCPPGYVVYNIFI 219
Query: 117 NGW-----FRSKNVKD-AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
S ++ D AE+ + EM N N V C + + D+A +L+KEM
Sbjct: 220 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
++G P+ Y+ VI L A + E+ + + + P + TYT L+ +CKAG +
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A + + M S G P+ TY + K +V A +++ +M+++G P+ +TY L
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLD----------------TSTMLIHLLCRMYK 334
+ LCK + A +V ++ D D T L+ LC+ +K
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSME 388
D A + M+ G P+++ + L D F K G AQ++ C + SV
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519
Query: 389 LLDSRCKD 396
L+D KD
Sbjct: 520 LIDRMFKD 527
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 6/286 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK G++ +A E F + + + P+V Y L++ F+ + A +
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKC--GYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K++ TPNVVTY +++G CR+ ++A++L+ M ++G PN + Y +IDGL +AG
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + + P VTY L+ C AG L+ A +L M + Y
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
+ FSK ++ + +M G P Y +L+ K +L++A+++ KEM
Sbjct: 659 CAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 716
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D D LI LC + +EA + +M RRG VP F
Sbjct: 717 PSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 762
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 15/306 (4%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D + P+ YN L+ + V R EM + + T G C+ R
Sbjct: 33 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A+ +++ +E + + ++ +I GL+EA F+E + R P +VTY +L+
Sbjct: 93 DALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+ K L +I+ MM++ G P+P+ +N + A L +M G
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209
Query: 282 PDRLTYHILLKILCKEDK------LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
P + Y+I + +C ++K LDLA ++ EM C ++ LC + KF
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL------NDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
D+A ++M+R+G VP T+ ++ + +K + K+ V V L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329
Query: 390 LDSRCK 395
+DS CK
Sbjct: 330 IDSFCK 335
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 126/308 (40%), Gaps = 48/308 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA + DSA + L +P S T+ LI R + G ++ A+
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLP---SVHTYTSLIDRMFKDGRLDLAMKVLS--- 538
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M+K+ + ++D LC+ G + A + +E + +P V Y L++G
Sbjct: 539 --QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE--KGCSPNVVTYTALIDGL 594
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE------ 173
++ + + + +M ++ +PN VTY L+ C +D+A L+ EM++
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYL 654
Query: 174 ---------------------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
G P A VY +ID +AGR E ++ + + +
Sbjct: 655 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE-IAMELHKEM 713
Query: 207 VCEPGPTMV---TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P Y SL++ C A +E A ++ M RGF+P + + + +
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 773
Query: 264 KVEDAMNL 271
K ++A+ L
Sbjct: 774 KWDEALQL 781
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 174/353 (49%), Gaps = 11/353 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ + G V+ T +I+IR+Y V AI TF
Sbjct: 95 MISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYK 154
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
FD G F+ LL +LC+ V+ A + + K + + + +NI+LNGW
Sbjct: 155 RF----KFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAV---FPLNTKSFNIVLNGWC 207
Query: 121 R-SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +++ER W EM K + +VV+Y +++ Y + + R +RL K+M+K GIEP+
Sbjct: 208 NLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDR 267
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VYN VI L + E +M+ P +VTY SL+K C+A +E A
Sbjct: 268 KVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDD 327
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ R P+ TY+ F R + G E+ L KM + G P TY +L++ C+ +
Sbjct: 328 MLKRCISPTIRTYHAFLRIL-RTG--EEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQ 384
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L+ ++ EM G D + +LIH L + D A + +M + L+P
Sbjct: 385 LENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLP 437
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 5/257 (1%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRRVD 161
+A +VR Y+ +++ + + A EMR ++VT TL + YC + V
Sbjct: 85 YAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVG 144
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
RAI ++ + + +++ L ++ +M P T ++ ++
Sbjct: 145 RAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTK-SFNIVL 203
Query: 222 KGYCK-AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
G+C G + ++ + M RG +Y +SK G + + LY++M + G
Sbjct: 204 NGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGI 263
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PDR Y+ ++ L K ++ A + K M+ +G ++ T LI LCR K +EA
Sbjct: 264 EPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKG 323
Query: 341 EFEDMIRRGLVPHYLTF 357
F+DM++R + P T+
Sbjct: 324 AFDDMLKRCISPTIRTY 340
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 32/175 (18%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA--- 163
P +VYN +++ + + V +A M ++ V PN+VTY +L++ CR R+V+ A
Sbjct: 265 PDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGA 324
Query: 164 ------------IR-----------------LVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
IR L+++MRK G +P Y +I +
Sbjct: 325 FDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQ 384
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
E V + + P +Y L+ G G+L+ A K M + LP P
Sbjct: 385 LENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEP 439
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 102/235 (43%), Gaps = 7/235 (2%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F R+ +V Y +++ ++R+ D A L+ EMR + + T++ +
Sbjct: 76 FLWAARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIR 135
Query: 191 EAGRFEEVSGMMERFLVCEP---GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
+ +V + F + + + SL+ C+ +++ A ++ M ++ P
Sbjct: 136 KYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQL--MYCNKAVFP 193
Query: 248 SPT-TYNYFFR-YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
T ++N + + G ++ ++R+M + G D ++Y ++ K L ++
Sbjct: 194 LNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLR 253
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ K+MK G + D +IH L + +EA + M +G+ P+ +T+ L
Sbjct: 254 LYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSL 308
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 153/300 (51%), Gaps = 3/300 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ LCK + A F K KEL PT++VYN+L++G+ NV+ A + EM+
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKEL--GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMK 817
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
P+ TY +L++ + + +++ L EM G +PN I YN VI LV++ R +
Sbjct: 818 SAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLD 877
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + + PT T+ L+ G K+G L+ A ++ M+ G P+ YN
Sbjct: 878 KAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ K G V+ A +++M++ G PD +Y IL+ ILC ++D A+ +++K G D
Sbjct: 938 NGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DL ++I+ L R + +EA + F +M RG+VP T+ L GM A K+
Sbjct: 998 PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 13/369 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA--IWTFEF 58
+I L A++ D A CL PD K T+V L+ +++ G ++ IWT
Sbjct: 305 LIDALCTARKLDDAMCLFTKMKSSSHKPD---KVTYVTLLDKFSDCGHLDKVEKIWTEME 361
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A+ + F IL+++LCK GR+ A + ++ Q P + YN L++G
Sbjct: 362 ADG------YAPDVVTFTILVNALCKAGRINEAFDLLDTMRK--QGVLPNLHTYNTLISG 413
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R+ + DA + M V P TY L++ + + +A+ ++M+ GI PN
Sbjct: 414 LLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ N + L E GR E M P VTY ++K Y K G ++ A K+L
Sbjct: 474 IVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLS 533
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M P N K G+VE+A ++ +M E P +TY+ILL L KE
Sbjct: 534 EMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEG 593
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ A+Q+ + M GC + T L+ LC+ + D A F M P LTF
Sbjct: 594 QIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFN 653
Query: 359 RLNDEFKKR 367
+ F K+
Sbjct: 654 TIIHGFIKQ 662
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 170/372 (45%), Gaps = 20/372 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCKQGRVKA 90
T+ I IR R G ++ A + +D D G + +L+D+LC ++
Sbjct: 266 TYTICIRVLGRDGKIDEA---YRIMKRMD-----DDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A F K K S P Y LL+ + ++ E+ W EM + P+VVT+ L
Sbjct: 318 AMCLFTKMKS--SSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL 375
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
V C+ R++ A L+ MRK+G+ PN YNT+I GL+ A R ++ +
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT TY L+ + K+G A + + M +RG P+ N ++ G++ +A
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKA 495
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ ++ SG PD +TY++++K K ++D AI++ EM C+ D+ LI L
Sbjct: 496 MFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLY 555
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM 387
+ + +EA F M L P +T+ L K G A +L M+ P ++
Sbjct: 556 KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTI 615
Query: 388 ---ELLDSRCKD 396
LLD CK+
Sbjct: 616 TFNTLLDCLCKN 627
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y I + R + +A R M + P+VVTY L++ C R++D A+ L
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCL 321
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M+ +P+ + Y T++D + G ++V + P +VT+T LV CK
Sbjct: 322 FTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCK 381
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG + A +L M +G LP+ TYN + +++DA++L+ M G P T
Sbjct: 382 AGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYT 441
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y +L+ K A++ ++MK RG ++ ++ L M + EA A F ++
Sbjct: 442 YILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELK 501
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
GL P +T+ + + K G A KL + MS V
Sbjct: 502 SSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV 538
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 2/221 (0%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+F F L+D L K GR+ A E F + P +YNIL+NG+ + +V
Sbjct: 890 DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGM--VHYGCRPNSAIYNILVNGYGKLGHVD 947
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A F+ M KE + P++ +Y LV+ C RVD A+ +++++ G++P+ + YN +I
Sbjct: 948 TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+GL + R EE + P + TY SL+ G +E A KI + + G
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLK 1067
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
P+ TYN R ++ G E A +Y+KM+ G P+ T+
Sbjct: 1068 PNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 9/325 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + AW L + PD T+ LI + ++G + F+ +
Sbjct: 796 LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF---TYNSLIDAHGKSGKINE---LFDLYD 849
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + + +++ +L K R+ A + ++ D ++PT + L++G
Sbjct: 850 EM-LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGD--FSPTPCTFGPLIDGLL 906
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S + DA + M PN Y LV GY +L VD A K M KEGI P+
Sbjct: 907 KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++D L AGR ++ E+ P +V Y ++ G ++ E A + M
Sbjct: 967 SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+RG +P TYN G +E+A +Y ++ G P+ TY+ L++
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTML 325
+LA + K+M GCD + T L
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 10/258 (3%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE-----GYCRLRRVDR 162
V Y I+ F ++ A +MR+ N +Y L+ G+C+
Sbjct: 158 NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCK-----E 212
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ + + M EG++P+ ++ ++ + + V G++E P + TYT ++
Sbjct: 213 ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
+ G ++ A +I+K M G P TY K++DAM L+ KM S + P
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D++TY LL LD ++ EM+ G D+ T T+L++ LC+ + +EA
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392
Query: 343 EDMIRRGLVPHYLTFKRL 360
+ M ++G++P+ T+ L
Sbjct: 393 DTMRKQGVLPNLHTYNTL 410
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 172/351 (49%), Gaps = 22/351 (6%)
Query: 52 AIWTFEFANNLD---MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT 108
I FE A N+ M K F S + ++ LC +V+ A + F + K AP
Sbjct: 199 GIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKR--NGIAPD 256
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V VY L++ + ++ ++ A ++ EM ++ PNVVTY L+ Y + R+V +A + +
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME--------------RFLVCEPG--- 211
M +G PN + Y +IDGL +AG+ E+ S + + F V +
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE 376
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + TY +LV G CKA ++ A +LK M G P+ Y+ K GK+++A +
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ M+E GY P+ TY L+ L K+ +LDLA++V +M C ++ T +I LC+
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ K DEA M +G P+ +T+ + D F K G +L MSS
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSS 547
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 193/405 (47%), Gaps = 30/405 (7%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +F+ A+ ++ + + +PD T+ +I A VE A F+
Sbjct: 195 RCLCGIGKFEKAYNVIREMMSKGFIPD---TSTYSKVIGYLCNASKVEKAFQLFQ----- 246
Query: 63 DMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+M +N ++ L+DS CK G ++ A +F + + AP V Y L++ + +
Sbjct: 247 EMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER--DGCAPNVVTYTALIHAYLK 304
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE----- 176
S+ V A + M + TPN+VTY L++G C+ ++++A ++ K M+KE +E
Sbjct: 305 SRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVD 364
Query: 177 ------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
PN Y ++DGL +A + +E +++ V P V Y +L+ G
Sbjct: 365 MHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGC 424
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CKAG L+ A ++ M+ G+ P+ TY+ K +++ A+ + KM+E+ P+
Sbjct: 425 CKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNV 484
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+ Y ++ LCK K D A ++ M+ +GC+ ++ T T +I + + ++ +
Sbjct: 485 VIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQ 544
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV--PRSM 387
M +G P+++T++ L + G+ A KL M PR +
Sbjct: 545 MSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHV 589
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 174/389 (44%), Gaps = 26/389 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + + A+ L + PD + LI + +AG +E A F+
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVY---VYTTLIDSFCKAGFIEQARNWFDEME 284
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + +L L K +V A+E + L + P + Y L++G
Sbjct: 285 RDGCAPNVVTYTALIHAYL----KSRKVSKANEVYEMM--LSKGCTPNIVTYTALIDGLC 338
Query: 121 RSKNVKDAERFWLEMRKENVT-----------------PNVVTYGTLVEGYCRLRRVDRA 163
++ ++ A + + M+KENV PNV TYG LV+G C+ +V A
Sbjct: 339 KAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEA 398
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
L+K M EG EPN +VY+ +IDG +AG+ +E + L C P + TY+SL+
Sbjct: 399 RDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDR 458
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
K L+ A K+L M+ P+ Y K GK ++A L M E G P+
Sbjct: 459 LFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPN 518
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+TY ++ K +++ +++ ++M +GC + T +LI+ C DEA E
Sbjct: 519 VVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLE 578
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+M + H ++++ + F + + +L
Sbjct: 579 EMKQTYWPRHVAGYRKVIEGFNREFIASL 607
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 16/326 (4%)
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
SLCK G+ + A K + + P +Y +++G + ++A F MR +
Sbjct: 19 SLCKSGKWREALSLLEK-----EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSC 73
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
PNV+TY L+ G ++ R R++ M EG P+ ++N+++ +G +
Sbjct: 74 LPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYK 133
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGD-----LEGASKILKMMISRGFLPSPTTYNYF 255
++++ + C P V Y L+ G C + + L+ A K M+ G + + + F
Sbjct: 134 LLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNF 193
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
R GK E A N+ R+M+ G+ PD TY ++ LC K++ A Q+ +EMK G
Sbjct: 194 SRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGI 253
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D+ T LI C+ ++A F++M R G P+ +T+ L + K + A +
Sbjct: 254 APDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANE 313
Query: 376 LCNVMSS------VPRSMELLDSRCK 395
+ +M S + L+D CK
Sbjct: 314 VYEMMLSKGCTPNIVTYTALIDGLCK 339
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 169/375 (45%), Gaps = 53/375 (14%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN-------NLDMVKNFDSGAS------ 73
P+ V T+ LI +AG +E A ++ ++DM GAS
Sbjct: 324 TPNIV---TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVF 380
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+D LCK +VK A + + P VY+ L++G ++ + +A+ +
Sbjct: 381 TYGALVDGLCKAYQVKEARDLLKSMSV--EGCEPNHVVYDALIDGCCKAGKLDEAQEVFT 438
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + PNV TY +L++ + +R+D A++++ +M + PN ++Y +IDGL + G
Sbjct: 439 TMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVG 498
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ +E +M P +VTYT+++ G+ K+G +E ++L+ M S+G P+ TY
Sbjct: 499 KTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558
Query: 254 YFFRYFSKFGKVEDAMNL---------------YRKMIE------------------SGY 280
+ G +++A L YRK+IE +
Sbjct: 559 VLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDS 618
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG--CDIDLDTSTMLIHLLCRMYKFDEA 338
P Y +L+ K +L++A+++++E+ + + LI L +K D+A
Sbjct: 619 VPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKA 678
Query: 339 SAEFEDMIRRGLVPH 353
+ DMI RG +P
Sbjct: 679 FELYADMISRGSIPE 693
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 24/329 (7%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS----KNVKD-A 128
+F L+ + C+ G A Y +K + P VYNIL+ G S K+V D A
Sbjct: 114 IFNSLVHAYCRSGDYAYA--YKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLA 171
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
E+ + EM + V N V C + + ++A +++EM +G P+ Y+ VI
Sbjct: 172 EKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGY 231
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L A + E+ + + P + YT+L+ +CKAG +E A M G P+
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TY + K KV A +Y M+ G TP+ +TY L+ LCK K++ A Q+ K
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351
Query: 309 EMKCRGCDI-DLD----------------TSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
MK +I D+D T L+ LC+ Y+ EA + M G
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE 411
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P+++ + L D K G AQ++ M
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTM 440
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T G C+ + A+ L + KE P+ ++Y +I GL EA FEE + R
Sbjct: 12 TLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRM 68
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P ++TY L+ G L +IL MMI+ G PSP +N + + G
Sbjct: 69 RASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDY 128
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCK-----EDKLDLAIQVSKEMKCRGCDIDLD 320
A L +KM++ G P + Y+IL+ +C +D LDLA + EM G ++
Sbjct: 129 AYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKV 188
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ LC + KF++A +M+ +G +P T+ ++
Sbjct: 189 NISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKV 228
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 48/316 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V D LI +AG ++ A F + +D + L+D L K R
Sbjct: 412 PNHVVYDA---LIDGCCKAGKLDEAQEVFTTM----LECGYDPNVYTYSSLIDRLFKDKR 464
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + K L+ S AP V +Y +++G + +A + + M ++ PNVVTY
Sbjct: 465 LDLALKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTY 522
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER--- 204
+++G+ + RV++ + L+++M +G PN + Y +I+ G +E ++E
Sbjct: 523 TAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582
Query: 205 ----------------------------FLVCEPG--PTMVTYTSLVKGYCKAGDLEGAS 234
F + E P Y L+ + KAG LE A
Sbjct: 583 TYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIAL 642
Query: 235 KILKMMISRGFLP-SPTTYNYFFRYFSKFG---KVEDAMNLYRKMIESGYTPDRLTYHIL 290
++ + + S F P S N K + A LY MI G P+ L
Sbjct: 643 ELNEELSS--FSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHL 700
Query: 291 LKILCKEDKLDLAIQV 306
+K L + ++ + A+Q+
Sbjct: 701 IKGLLRVNRWEEALQL 716
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 189/383 (49%), Gaps = 20/383 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L KA++F++ L+ + K G + D F I I+ +A AG ++ A+ FE
Sbjct: 244 MLHILGKARQFETMVALVQEMGKAGA------LCMDAFKIAIKSFAAAGEIKNAVGVFEM 297
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
V FD G F LL +L ++G K A+ F + ++ + P +R Y L+
Sbjct: 298 MR----VHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRD---QYTPDLRSYTALMLA 350
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W ++N+ +A R W +M ++ + P+VV + T+++G R +R A+++ + M+ +G PN
Sbjct: 351 WCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPN 410
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y +I + G+ + E V P + TYT L+ GY A ++ + +L+
Sbjct: 411 VWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLE 470
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-ILCKE 297
M +G P TYN + + +DA+ +Y+KMI G P TY++++K
Sbjct: 471 EMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGG 530
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ V +EM +G D+++ T+ I+ R + EA E+MI++G+ + +
Sbjct: 531 RNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDY 590
Query: 358 KRLNDEFKKRG----MTALAQKL 376
+ +F K G + LAQK+
Sbjct: 591 NKFAADFSKAGKPDILYELAQKV 613
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V +T + + R R A+ FE L K + +L+ CKQG+
Sbjct: 374 PDVVVHNTMIDGLLRGQRR---PEAVKMFE----LMKAKGPPPNVWTYTMLIRDHCKQGK 426
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A F + + P V Y LL G+ +K + EM ++ P+ TY
Sbjct: 427 LDMAMRCFEEMQV--AGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTY 484
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--------FEEVS 199
L++ D A+R+ K+M +G+EP YN ++ GR +EE
Sbjct: 485 NALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEE-- 542
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
M R +C P + +YT + G+ + G A K L+ MI +G YN F F
Sbjct: 543 --MHRKGIC---PDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADF 597
Query: 260 SKFGKVEDAMNLYRKMIESG 279
SK GK + L +K+ +G
Sbjct: 598 SKAGKPDILYELAQKVKFTG 617
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 35/259 (13%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKE----------------------------------M 170
VTY ++ + R+ + + LV+E M
Sbjct: 239 VTYCKMLHILGKARQFETMVALVQEMGKAGALCMDAFKIAIKSFAAAGEIKNAVGVFEMM 298
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
R G + +N ++ L + G +E + + +R + + P + +YT+L+ +C A +L
Sbjct: 299 RVHGFDDGVESFNCLLVALAQEGLGKEAARVFDR-MRDQYTPDLRSYTALMLAWCNARNL 357
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A ++ M+ +G P +N + + +A+ ++ M G P+ TY +L
Sbjct: 358 VEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTML 417
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
++ CK+ KLD+A++ +EM+ GC ++ T T L+ + D +A E+M ++G
Sbjct: 418 IRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGC 477
Query: 351 VPHYLTFKRLNDEFKKRGM 369
P T+ L R M
Sbjct: 478 PPDGRTYNALIKLLTNRNM 496
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 52/419 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKD--TFVILIRRYARAGMVEAAIWTFE 57
++ +AK +FD L H++ + +S D +F ILI + R A+
Sbjct: 621 VLTAIAKMNKFDIVIYLF------HKMENLGISHDLYSFTILIHCFCRCSRFSLALALLG 674
Query: 58 FANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
M+K F LL+ C+ R + A EL P V +YN ++
Sbjct: 675 -----KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL--GLEPNVVIYNTVI 727
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG +++++ +A + M K+ + + VTY TL+ G C R A RL+++M K I+
Sbjct: 728 NGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKID 787
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN I + +ID V+ G E + + + P ++TY SL+ G+C G L A +
Sbjct: 788 PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHM 847
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------------------- 271
+M+S+G P TYN F K +VED M L
Sbjct: 848 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907
Query: 272 ----------YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
+ +M++ G PD +TY+ILL LC K++ A+ + ++++ D+D+ T
Sbjct: 908 AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++I +CR K EA F + R+G+ + + + + G+ A KLC M
Sbjct: 968 YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRM 1026
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 172/359 (47%), Gaps = 9/359 (2%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+FD A+ L + + +P V F ++ A+ + I+ F NL + +
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVD---FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLY 651
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S F IL+ C+ R A K +L + P++ LLNG+ + ++A
Sbjct: 652 S----FTILIHCFCRCSRFSLALALLGKMMKL--GFQPSIVTLGSLLNGFCQGNRFQEAV 705
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
M + + PNVV Y T++ G C+ R ++ A+ + M K+GI +A+ YNT+I GL
Sbjct: 706 SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+GR+ + + ++ + + P ++ +T+L+ + K G+L A + K MI R P+
Sbjct: 766 CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNI 825
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN F G++ DA +++ M+ G PD +TY+ L+ CK +++ +++ E
Sbjct: 826 LTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 885
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M +G D T LIH C+ K + A F M+ G+ P +T+ L D G
Sbjct: 886 MTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNG 944
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 148/319 (46%), Gaps = 11/319 (3%)
Query: 31 VSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGR 87
+S D +F ILI + R + A+ M+K +D F LL C + R
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILG-----KMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN-VTPNVVT 146
+ A + + P V VYN L++ ++ +V A EM K+ + ++VT
Sbjct: 151 IHDAFSLVASM--VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVT 208
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G C +A R++++M K I P+ + +ID V+ G +E + ++ L
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML 268
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
GP VTY SL+ G C G L A K +M S+G P+ TYN F K +VE
Sbjct: 269 QSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVE 328
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D M L+++M G D TY+ L+ C+ KL +A + M G D+ T +L+
Sbjct: 329 DGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388
Query: 327 HLLCRMYKFDEASAEFEDM 345
H LC + A +F DM
Sbjct: 389 HGLCVNGEIGSAMVKFNDM 407
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 64 MVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MVK+ ++ ++ L+D LCK G V A E ++ ++ + A V YN LL G S
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLV-TYNTLLTGLCYS 219
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ A R +M K + P+V T+ L++ + + +D A L K+M + I PN + Y
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N++I+GL GR + L+ G P +VTY +L+ G+CK+ +E K+ + M
Sbjct: 280 NSLINGLCMHGRLYHAKKTFD--LMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G + TYN + + GK+ A +++ M+ G TPD +T+ ILL LC ++
Sbjct: 338 YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEI 397
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
A+ +M+ + + ++IH LC+ K +EA F + G+ P T+
Sbjct: 398 GSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 12/310 (3%)
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
YF ++ EL + + + IL++ + R + A +M K P++VT+G+L+ G
Sbjct: 86 YFSQQMEL-FGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHG 144
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEP 210
+C R+ A LV M K G EPN +VYNT+ID L + G E+ ME+
Sbjct: 145 FCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEK--KGRL 202
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+VTY +L+ G C +G+ A++IL+ M R P T+ F K G +++A
Sbjct: 203 AADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE 262
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
LY++M++S P+ +TY+ L+ LC +L A + M +GC ++ T LI+ C
Sbjct: 263 LYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFC 322
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVP 384
+ + ++ F+ M R GLV T+ L + + G +A+ + C V +
Sbjct: 323 KSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDII 382
Query: 385 RSMELLDSRC 394
LL C
Sbjct: 383 THCILLHGLC 392
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 16/316 (5%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + A + L+ LC GR A+ R + + P V + L++ + + N+
Sbjct: 749 KGIVADAVTYNTLISGLCNSGRWTDAARLL--RDMVKRKIDPNVIFFTALIDTFVKEGNL 806
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A+ + EM + +V PN++TY +L+ G+C R+ A + M +G P+ + YNT+
Sbjct: 807 LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL 866
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMV-----TYTSLVKGYCKAGDLEGASKILKMM 240
I G ++ R E+ GM L CE + TY +L+ GYC+AG L A K+ M
Sbjct: 867 ITGFCKSKRVED--GMK---LFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 921
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+E A+ + + ++ D +TY+I+++ +C+ DK+
Sbjct: 922 VDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKV 981
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + + + +G +D +I LCR EA M G +P +R+
Sbjct: 982 KEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPS----ERI 1037
Query: 361 NDEFKKRGMTALAQKL 376
DE + T+L+ +L
Sbjct: 1038 YDETLRDHYTSLSAEL 1053
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 2/237 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D+ KQG + A E + ++ L S P YN L+NG + A++ +
Sbjct: 244 FTALIDAFVKQGNLDEAQELY--KQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDL 301
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY TL+ G+C+ RRV+ ++L + M +EG+ + YNT+I G + G+
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + C P ++T+ L+ G C G++ A M S YN
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
K KVE+A L+ ++ G PD TY I++ LCK A ++ + MK
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK 478
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L G+ S +DA +LEM + P+VV + L+ LRR + I ++M G
Sbjct: 36 LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I + + +I R ++ + + P++VT+ SL+ G+C + A
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-YTPDRLTYHILLKI 293
++ M+ G+ P+ YN K G V A+ L +M + G D +TY+ LL
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LC + A ++ ++M R + D+ T T LI + DEA ++ M++ + P+
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+T+ L + G A+K ++M+S
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMAS 304
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P++V + ++ ++ + D I L +M GI + + +I
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
RF ++ + + P++VT SL+ G+C+ + A ++ M G
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ YN K + +A+ ++ M + G D +TY+ L+ LC + A ++
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++M R D ++ T LI + EA +++MIRR + P+ LT+ L + F
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 367 RGMTALAQKLCNVMSS 382
+G A+ + ++M S
Sbjct: 838 QGRLGDAKHMFDLMVS 853
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 49/251 (19%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + + G ++ A ++ + + + L++ LC GR+
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQM----LQSSIGPNTVTYNSLINGLCMHGRL------ 292
Query: 95 FHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+H +K D + P V YN L+NG+ +S+ V+D + + M +E + + TY TL
Sbjct: 293 YHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTL 352
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV----------------------------- 181
+ GYC++ ++ A + M G+ P+ I
Sbjct: 353 IHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEK 412
Query: 182 ------YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
YN +I GL +A + EE + R V P TYT ++ G CK G A +
Sbjct: 413 YLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 472
Query: 236 ILKMMISRGFL 246
+ + M G +
Sbjct: 473 LFRRMKEDGII 483
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 69/166 (41%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L G+ + E A + M+ LPS + + + E + ++M G
Sbjct: 36 LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ D ++ IL+ C+ +L LA+ + +M G D + T L+H C + +A
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
+ M++ G P+ + + L D K G +A +L N M R
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGR 201
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 184/356 (51%), Gaps = 20/356 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L+KA + + A LL+ G PD V+ F++ Y++ G M EAA + E
Sbjct: 226 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL---GYSKTGKMTEAAKYFDEML 282
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
++ M N L+ +L++ K G + A F L P V+ + ++G
Sbjct: 283 DHGLMPNN-----PLYTVLINGHFKAGNLMEALSIFRHLHAL--GVLPDVQTCSAFIHGL 335
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ V++A + + E++++ + P+V TY +L+ G+C+ V++A L EM +GI PN
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395
Query: 180 IVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+YN ++DGL ++G + GM E+ L P VTY++++ GYCK+ ++ A
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLE----PDSVTYSTMIDGYCKSENVAEAFS 451
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M S+G P YN K G +E AMNL+R+M++ G+ L+++ L+ C
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYC 510
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
K K+ A Q+ +EM + D T T +I C+ K +EA+ F++M R L+
Sbjct: 511 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 566
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 32/386 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD + F I + G V+ A+ F +V + + +SL + CKQG
Sbjct: 322 LPDVQTCSAF---IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL----ISGFCKQG 374
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V+ A E H L + AP + +YN L++G +S +++ A + + M ++ + P+ VT
Sbjct: 375 EVEKAFE-LHDEMCL-KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 432
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T+++GYC+ V A L EM +G++P++ VYN ++ G + G E+ + L
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492
Query: 207 VCEPG-PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ G T +++ +L+ GYCK+ ++ AS++ + MI++ +P TY + K GK+
Sbjct: 493 --QKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM 550
Query: 266 EDA-----------------MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
E+A L+ KM+ G PD +TY +++ CKED L A ++
Sbjct: 551 EEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 610
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E+ +G +LI LC+ EAS ++M GL P L F + G
Sbjct: 611 EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAG 670
Query: 369 MTALAQKLCNVMSS---VPRSMELLD 391
A ++ + S VP + L+D
Sbjct: 671 KMDEATRVFEGVKSLGLVPDTTTLID 696
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 15/320 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ LCK G+++ A+E + + P R + +L+ G+ R N+ A E
Sbjct: 83 YNVLIHGLCKFGKMEKAAEIL--KGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 140
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K N+ P+ V+YG ++ G C + + A +L+++M G++PN +VY+T+I G GR
Sbjct: 141 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE +++ P + Y +++ KAG +E AS L + RG P T+
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F +SK GK+ +A + +M++ G P+ Y +L+ K L A+ + + + G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + IH L + + EA F ++ +GLVP T+ L F K+G
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG------ 374
Query: 375 KLCNVMSSVPRSMELLDSRC 394
V ++ EL D C
Sbjct: 375 -------EVEKAFELHDEMC 387
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 166/341 (48%), Gaps = 11/341 (3%)
Query: 31 VSKDTFV--ILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
V+ D F +I ++AG M EA+ + E + A F + K G+
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-----RGLKPDAVTFGAFILGYSKTGK 270
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A++YF + LD P +Y +L+NG F++ N+ +A + + V P+V T
Sbjct: 271 MTEAAKYFDEM--LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+ G + RV A+++ E++++G+ P+ Y+++I G + G E+ + + +
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + Y +LV G CK+GD++ A K+ M +G P TY+ + K V +
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 448
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A +L+ +M G P Y+ L+ CKE ++ A+ + +EM +G L +T LI
Sbjct: 449 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNT-LID 507
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ K EAS F++MI + ++P ++T+ + D K G
Sbjct: 508 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 166/383 (43%), Gaps = 41/383 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G +E A + L N + F +L++ C++ + A E
Sbjct: 82 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN----SRTFCLLIEGYCREHNMGRALEL 137
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ ++ ++ P+ Y ++NG K++ A + +M + PNVV Y TL+ GY
Sbjct: 138 LDEMEK--RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 195
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R++ A RL+ M G+ P+ YN +I L +AG+ EE S + P
Sbjct: 196 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 255
Query: 215 VT-----------------------------------YTSLVKGYCKAGDLEGASKILKM 239
VT YT L+ G+ KAG+L A I +
Sbjct: 256 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 315
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ + G LP T + F K G+V++A+ ++ ++ E G PD TY L+ CK+ +
Sbjct: 316 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 375
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A ++ EM +G ++ L+ LC+ A F+ M +GL P +T+
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
+ D + K A A L + M S
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPS 458
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 10/291 (3%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAE 129
++ L+ +GR++ A R+ LD AP + YN +++ ++ +++A
Sbjct: 187 VYSTLIMGYASEGRIEEA------RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ LE++ + P+ VT+G + GY + ++ A + EM G+ PN +Y +I+G
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+AG E + P + T ++ + G K G ++ A K+ + +G +P
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ F K G+VE A L+ +M G P+ Y+ L+ LCK + A ++
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M +G + D T + +I C+ EA + F +M +G+ PH + L
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
++ P Y I+ G R+K + +A+ + EM+K + P+ L++G+ R +D
Sbjct: 3 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+R+ M GI N I YN +I GL + G+ E+ + +++ + P T+ L+
Sbjct: 63 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
+GYC+ ++ A ++L M R +PS +Y + A L KM SG
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ + Y L+ E +++ A ++ M C G D+ +I L + K +EAS
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ RGL P +TF + K G A K
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 276
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 131/296 (44%), Gaps = 33/296 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPD-FVSKDTFV--ILIRRYARAGMVEAAIWTFE 57
MI K++ A+ L HE+P V +FV L+ + G +E A+ F
Sbjct: 436 MIDGYCKSENVAEAFSLF------HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 489
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+M++ + F L+D CK +++ AS+ F + + + P Y +++
Sbjct: 490 -----EMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEM--IAKQIMPDHVTYTTVID 542
Query: 118 GWFRSKNVKDAERFWLEMRKEN-----------------VTPNVVTYGTLVEGYCRLRRV 160
++ +++A + EM++ N V P+ VTYG ++ +C+ +
Sbjct: 543 WHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 602
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A +L E+ +G+ +++ +I L + E S +++ P++ ++L
Sbjct: 603 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTL 662
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
V+ + +AG ++ A+++ + + S G +P TT EDA NL ++++
Sbjct: 663 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G +P+ TY + ++ +A + +M ++G PD L+ +E
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D +++ M G I+L T +LIH LC+ K ++A+ + MI G P+ TF
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
L + + + ++ R++ELLD
Sbjct: 121 LIEGYCRE-------------HNMGRALELLD 139
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 195/385 (50%), Gaps = 20/385 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L + K+F W L+ ++ + G +VS T ++RR ARAG + A+ F
Sbjct: 171 MVDILGRRKKFSFMWELVKEMENLEG-----YVSLVTMKKVMRRLARAGNFQDAVEAFRG 225
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L + K+ ++ +L+D+L K+G V+ A F E S + +NILL+G
Sbjct: 226 IEKLGVRKDIEA----LNVLMDALVKEGSVEHAYSAF---MEFKDSIHVDFQSFNILLHG 278
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +++ + DA + EM K+ PNVV+Y +E YC+L+ + EM+++ +PN
Sbjct: 279 YCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPN 338
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASK 235
I Y + L G+ ++V+ +E + + + P Y+SL+ ++G L+ A
Sbjct: 339 VITYTIFMHAL---GKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWD 395
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ + M +G P TYN + E+A+ L R+M E PD TY LLK+ C
Sbjct: 396 VFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCC 455
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
++ ++ + + M IDL T +L+ LC+ K + A + FE+M+ +GL+P
Sbjct: 456 RKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDR 515
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVM 380
T+K L +E ++ +T +K+ +M
Sbjct: 516 TYKMLVEELEQNNLTEAKEKIQKLM 540
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 36/249 (14%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE---------- 196
Y +V+ R ++ LVKEM + + V+ L AG F+
Sbjct: 168 YDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGIE 227
Query: 197 --------EVSGMMERFLVCEPGPTMVTYTS-----------------LVKGYCKAGDLE 231
E ++ LV E G Y++ L+ GYCKA L+
Sbjct: 228 KLGVRKDIEALNVLMDALVKE-GSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLD 286
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A KI+ M +GF P+ +Y F + K + ++ +M E P+ +TY I +
Sbjct: 287 DARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFM 346
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
L K +++ A++V + MK C D + LI +L + + +A FEDM ++G+
Sbjct: 347 HALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVS 406
Query: 352 PHYLTFKRL 360
P LT+ +
Sbjct: 407 PDLLTYNTM 415
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y+ ++D L +F + +++ E ++VT +++ +AG+ + A + + +
Sbjct: 167 LYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGI 226
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G N K G VE A + + + +S + D +++ILL CK KL
Sbjct: 227 EKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHV-DFQSFNILLHGYCKARKL 285
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D A ++ EM +G ++ + T I L C++ F A F +M + P+ +T+
Sbjct: 286 DDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITY 342
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 163/331 (49%), Gaps = 6/331 (1%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI +R G +E AI + +V N + L++ LC GR A +
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN----TVTYNALINELCVGGRFSTALK 436
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
FH E S A T + YN ++ G +++ A + +M K P VVTY TL+ G
Sbjct: 437 IFH-WMEGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y V+ A RL+ M++ G EP+ YN ++ G + G+ E S + + C P
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
V+YT+L+ G+ K G ++ A +L+ M G P+ +YN SK + +A +
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM E G P+ +TY L+ LC+ + A ++ +M+ R C +L T + LI+ LC+
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
K DEA ++M R+GL P +TF L D F
Sbjct: 675 KADEAEILLKEMERKGLAPDEVTFTSLIDGF 705
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 193/411 (46%), Gaps = 44/411 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I +L+K + A L+L +I +++ PD T+ LI + R ++ A F+
Sbjct: 246 LINILSKKGKVREAE-LILSQIFQYDLSPDVF---TYTSLILGHCRNRNLDLAFGVFD-- 299
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD---------------- 102
MVK D + + L++ LC +GRV A + + E
Sbjct: 300 ---RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356
Query: 103 -----------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ P V+ Y L++G R ++ A + +M KE + PN V
Sbjct: 357 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 416
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ C R A+++ M G N YN +I GL G E+ + E+
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L P PT+VTY +L+ GY G++ A+++L +M G P TYN FSK+GK+
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E A +++M+E G P+ ++Y L+ K+ K+D+A+ + + M+ GC+ ++++ +
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
I+ L + +F EA + M +GL+P+ +T+ L D + G T A K+
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 167/324 (51%), Gaps = 4/324 (1%)
Query: 59 ANNLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
A+ L+ + G SL+ LL L K V+ A + ++ L+ P++ +N L+
Sbjct: 190 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY--KQMLNSGIQPSLLTFNTLI 247
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
N + V++AE ++ + +++P+V TY +L+ G+CR R +D A + M KEG +
Sbjct: 248 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 307
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN++ Y+T+I+GL GR +E M+E + PT+ TYT + C E A ++
Sbjct: 308 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 367
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M RG P+ TY S+ GK+E A+ LY KM++ G P+ +TY+ L+ LC
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ A+++ M+ G + T +I LC ++A FE M++ G +P +T
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 487
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
+ L + + +G A +L ++M
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLM 511
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 30/372 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ LI +++ G V+ A+ E + N +S + +++ L K+ R A +
Sbjct: 557 SYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES----YNAVINGLSKENRFSEAEKI 612
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K E Q P V Y L++G R+ + A + + +M K PN+ TY +L+ G
Sbjct: 613 CDKMAE--QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + D A L+KEM ++G+ P+ + + ++IDG V GR + ++ R + P
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNY 730
Query: 215 VTYTSLVKG------------------------YCKAGDLEGASKILKMMISRGFLPSPT 250
TY+ L+KG + K + E S +L M G P+
Sbjct: 731 RTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLD 790
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ + G+ +A L + M E G+ PDR Y+ LL CK ++D A+++ +
Sbjct: 791 TYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSI 850
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ +G + L LI LC+ + +EA A F++M+ + + + L D K G
Sbjct: 851 EAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 910
Query: 371 ALAQKLCNVMSS 382
L KL ++M S
Sbjct: 911 DLCMKLLHIMES 922
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 147/337 (43%), Gaps = 37/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ L K+G+V+ A + + D S P V Y L+ G R++N+ A +
Sbjct: 243 FNTLINILSKKGKVREAELILSQIFQYDLS--PDVFTYTSLILGHCRNRNLDLAFGVFDR 300
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------------------ 170
M KE PN VTY TL+ G C RVD A+ +++EM
Sbjct: 301 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 360
Query: 171 -----------RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+K G PN Y +I GL G+ E G+ + L P VTY +
Sbjct: 361 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 420
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ C G A KI M G L + TYN + G +E AM L+ KM++ G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P +TY+ L+ + ++ A ++ MK GC+ D T L+ + K + AS
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M+ GL P+ +++ L D K G +A L
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 169/421 (40%), Gaps = 105/421 (24%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ V T+ LI G A+ F + + N + + ++ LC G
Sbjct: 412 VPNTV---TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT----YNEIIKGLCLGG 464
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN------- 139
++ A F K L PTV YN L+NG+ NV +A R L++ KEN
Sbjct: 465 DIEKAMVLFEKM--LKMGPLPTVVTYNTLINGYLTKGNVNNAARL-LDLMKENGCEPDEW 521
Query: 140 -----------------------------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+ PN V+Y TL++G+ + +VD A+ L++ M
Sbjct: 522 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM 581
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEV---------SGMMERFL--------VCEPG-- 211
+ G PN YN VI+GL + RF E G++ + +C G
Sbjct: 582 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRT 641
Query: 212 ----------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
P + TY+SL+ G C+ G + A +LK M +G P T+
Sbjct: 642 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL--------------- 300
F G+++ A L R+M++ G P+ TY +LLK L KE L
Sbjct: 702 IDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSF 761
Query: 301 -----DLAIQVSKEMKCR----GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D+ ++ + R GC+ LDT + L+ LCR +F EA +DM RG
Sbjct: 762 SPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 821
Query: 352 P 352
P
Sbjct: 822 P 822
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 179/401 (44%), Gaps = 36/401 (8%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K ++A L L K G E PD + T+ L+ +++ G +E+A + F+ +M
Sbjct: 496 LTKGNVNNAARLLDLMKENGCE-PD---EWTYNELVSGFSKWGKLESASFYFQ-----EM 546
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
V+ + + L+D K G+V A + +E+ P V YN ++NG +
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM--GCNPNVESYNAVINGLSKEN 604
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+AE+ +M ++ + PNV+TY TL++G CR R A ++ +M K PN Y+
Sbjct: 605 RFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 664
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL + G+ +E +++ P VT+TSL+ G+ G ++ A +L+ M+
Sbjct: 665 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDV 724
Query: 244 GFLPSPTTYN------------------------YFFRYFSKFGKVEDAMNLYRKMIESG 279
G P+ TY+ Y F K E NL +M E G
Sbjct: 725 GCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIG 784
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P TY L+ LC++ + A Q+ K+MK RG D + L+ C+ + D A
Sbjct: 785 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 844
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F + +G H ++ L K G AQ L + M
Sbjct: 845 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 139/275 (50%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D+ +AP + +++ + ++ F E+ ++ + TL+ + V+
Sbjct: 163 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 222
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A L K+M GI+P+ + +NT+I+ L + G+ E ++ + + P + TYTSL+
Sbjct: 223 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 282
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+C+ +L+ A + M+ G P+ TY+ G+V++A+++ +MIE G
Sbjct: 283 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P TY + + LC + + AI++ MK RGC ++ T T LI L R+ K + A
Sbjct: 343 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 402
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ M++ GLVP+ +T+ L +E G + A K+
Sbjct: 403 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 437
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PT+ Y+ L++G R +AE+ +M++ P+ Y +L+ +C+ VD A+++
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +G + + +Y +I L +AG+ EE + + L E + +T LV G K
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 906
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
G+L+ K+L +M S+ F P+ TY R S+ GK ++ L K+
Sbjct: 907 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 16/379 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + + F+ WC + ++ + +F I+I+ AG +E +F+
Sbjct: 135 LLTFVVGSSSFNQWWCFFNES----KIKVVLDVYSFGIVIKGCCEAGEIEK---SFDLLV 187
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD---QSWAPTVRVYNILLN 117
L F ++ L+D CK+G ++ A + F + + W Y +L++
Sbjct: 188 ELREF-GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT-----YTVLIH 241
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G F++ K + +M++ V PN+ TY ++ C+ R A ++ EMR+ G+
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + YNT+I GL + E + +M++ P ++TY +L+ G+C G L A +
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLC 361
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + SRG PS TYN F + G A + ++M E G P ++TY IL+ +
Sbjct: 362 RDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D ++ AIQ+ M+ G D+ T ++LIH C + +EAS F+ M+ + L P+ + +
Sbjct: 422 DNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIY 481
Query: 358 KRLNDEFKKRGMTALAQKL 376
+ + K G + A +L
Sbjct: 482 NTMILGYCKEGSSYRALRL 500
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 159/318 (50%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G+ + +E + N + + +++ LCK GR K A +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYT----YNCVMNQLCKDGRTKDAFKV 290
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + + + YN L+ G R +A + +M+ + PN++TY TL++G+
Sbjct: 291 FDEMRE--RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGF 348
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + ++ +A+ L ++++ G+ P+ + YN ++ G G + M++ P+
Sbjct: 349 CSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT L+ + ++ ++E A ++ M G +P TY+ F G++ +A L++
Sbjct: 409 VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E P+ + Y+ ++ CKE A+++ ++M+ + ++ + + LI +LC+ K
Sbjct: 469 MVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528
Query: 335 FDEASAEFEDMIRRGLVP 352
EA E MI G+ P
Sbjct: 529 LKEAEDLVEKMIDSGIDP 546
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
SK T+ ILI +AR+ +E AI L +V + + + +L+ C +G++ A
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHT----YSVLIHGFCIKGQMNEA 462
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
S F + +++ P +YN ++ G+ + + A R + +M ++ + PNV +Y L+
Sbjct: 463 SRLF--KSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLI 520
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
C+ R++ A LV++M GI+P+ + N +
Sbjct: 521 RVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 168/345 (48%), Gaps = 20/345 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
TF L+ + + A+ F+ +MVK ++ + +++ LCK G A +
Sbjct: 49 TFSTLLNGLSSKAKIIDAVKLFD-----EMVKMGYEPDVITYSTIINGLCKMGSTTMAIQ 103
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K +E + P V VY+ +++ + K + +A F EM ++PNVVTY +++ G
Sbjct: 104 LLKKMEE--KGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C L R + A L K+M + + P+ + +N ++DGL + G E + E + P
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TY +L+ GYC ++ A K+ +M+ +G PS +YN + K G++++A L
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLA 281
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M TPD +TY L+K C++ + A ++ +EM+ G DL T ++++ LC+
Sbjct: 282 EMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQG 341
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
DEA + M + P+ + T L Q +CN
Sbjct: 342 HLDEAFELLKAMQESKIEPNIFIY------------TILIQGMCN 374
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 6/295 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P ++ LLNG + DA + + EM K P+V+TY T++ G C++ AI+L
Sbjct: 45 PNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQL 104
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+K+M ++G +PN +VY+T+ID L + E + + P +VTY+S++ G+C
Sbjct: 105 LKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN 164
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A+ + K M+ R +P T+N SK G + +A ++ MIE G P+ T
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNT 224
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ C + ++D A ++ M +GC + + +LI C+ + DEA +M
Sbjct: 225 YNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMS 284
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
+ L P +T+ L F + G AQKL M S +P M +LD CK
Sbjct: 285 HKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCK 339
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L C GR A+ F ++ ++++ P +NIL++G + + +A+ +
Sbjct: 155 YSSILHGFCNLGRSNEATSLF--KQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFET 212
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V PNV TY L++GYC ++D A +L M ++G P+ YN +I G ++GR
Sbjct: 213 MIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR 272
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G++ P VTY++L+KG+C+ G + A K+L+ M S G LP TY+
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +++A L + M ES P+ Y IL++ +C KL+ A ++ + +G
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T T++I L + +EA F DM G +P+ T+ + F + G T+ A
Sbjct: 393 IQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAG 452
Query: 375 KL 376
+L
Sbjct: 453 RL 454
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 9/305 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V TF IL+ ++ GM+ A FE + K + + + L+D C Q
Sbjct: 184 MPDTV---TFNILVDGLSKEGMILEAQCVFETM----IEKGVEPNVNTYNALMDGYCSQS 236
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + F+ + + AP+VR YNIL+ G +S + +A+ EM + +TP+ VT
Sbjct: 237 QMDEAQKLFNIM--VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL++G+C+ R A +L++EMR G+ P+ + Y+ V+DGL + G +E +++
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + YT L++G C G LE A ++ + +G P TY K G
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L+R M G P+ TY+++++ + A ++ +EM RG D T ML
Sbjct: 415 EACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLS 474
Query: 327 HLLCR 331
L R
Sbjct: 475 DLESR 479
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 144/288 (50%), Gaps = 2/288 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+D L K+G + A F +++ P V YN L++G+ + +A++ +
Sbjct: 190 FNILVDGLSKEGMILEAQCVFETM--IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P+V +Y L++G+C+ R+D A L+ EM + + P+ + Y+T++ G + GR
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++E P ++TY+ ++ G CK G L+ A ++LK M P+ Y
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ FGK+E A L+ + G PD +TY +++ L K + A ++ ++M G
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
C + T ++I R A E+M+ RG TF+ L+D
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 2/248 (0%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRR--VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M N+ P+V T L+ +C A ++ M K G++PN + ++T+++GL
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ + + + + P ++TY++++ G CK G A ++LK M +G P+ Y
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K + +AM +M+ G +P+ +TY +L C + + A + K+M
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
R D T +L+ L + EA FE MI +G+ P+ T+ L D + +
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240
Query: 373 AQKLCNVM 380
AQKL N+M
Sbjct: 241 AQKLFNIM 248
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ ++ V I R + + E +N + + ++DSLC+ G
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKME-------ERNVKADVFTYSTIIDSLCRDGC 243
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ AA F KE++ + +V YN L+ G ++ D +M + PNV+T
Sbjct: 244 IDAAISLF---KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A L KEM GI PN I YNT++DG R E + M++ +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +VT+TSL+KGYC ++ K+ + + RG + + TY+ + F + GK++
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L+++M+ G PD +TY ILL LC KL+ A+++ ++++ D+ + T +I
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++A F + +G+ P+ +T+ + K+G + A L
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 178/391 (45%), Gaps = 15/391 (3%)
Query: 12 DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
D A L + I +P V F I R + +V +F L++
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLV------LDFCKQLEL-NGIAHN 122
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
I+++ C+ + A K +L + P +N L+NG V A
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKL--GYEPDTTTFNTLINGLCLEGKVSKAVVL 180
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + P++VTY ++V G CR A ++++M + ++ + Y+T+ID L
Sbjct: 181 VDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + + ++VTY SLV+G CKAG + +LK M+SR +P+ T
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N F K GK+++A LY++MI G +P+ +TY+ L+ C +++L A + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
C D+ T T LI C + + D+ F ++ +RGLV + +T+ L F + G
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 372 LAQKLCNVMSS---VPRSME---LLDSRCKD 396
LA++L M S +P M LLD C +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 14/352 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I R G ++AAI F+ K S + L+ LCK G+ +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEME----TKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P V +N+LL+ + + +++A + EM ++PN++TY TL++GY
Sbjct: 286 L--KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEP 210
C R+ A ++ M + P+ + + ++I G R ++ + +R LV
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV--- 400
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
VTY+ LV+G+C++G ++ A ++ + M+S G LP TY GK+E A+
Sbjct: 401 -ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ + +S + Y +++ +CK K++ A + + C+G ++ T T++I LC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ EA+ M G P+ T+ L + G + KL M S
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L KA +++ LL D + VP+ + TF +L+ + + G ++ A ++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVI---TFNVLLDVFVKEGKLQEANELYKEM- 324
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D C Q R+ A+ + +P + + L+ G+
Sbjct: 325 ---ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--VRNKCSPDIVTFTSLIKGYC 379
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V D + + + K + N VTY LV+G+C+ ++ A L +EM G+ P+ +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G+ E+ + E + +V YT++++G CK G +E A + +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY K G + +A L RKM E G P+ TY+ L++ ++ L
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +EMK G D + M+I +L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 151/305 (49%), Gaps = 13/305 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++DSLCK GR A F + +E + P + YN ++ G+ S DAE+
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVTY L+ + + + A L EM GI PN I YN++IDG +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 374
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P + T+T+L+ GYC A ++ ++L M RG + + TYN
Sbjct: 375 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 434
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
F G + A++L ++MI SG PD +T + LL LC KL A+++ K M+
Sbjct: 435 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 494
Query: 312 ---------CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G + D+ T +LI L KF EA +E+M RG+VP +T+ + D
Sbjct: 495 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 363 EFKKR 367
K+
Sbjct: 555 GLCKQ 559
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 165/364 (45%), Gaps = 44/364 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V + LL+G V +A F+ +
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
M + PNVVT+ TL+ G CR R+ A+ L+ M ++G++P I Y T++DG+ + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EEVS ++ ++ C+ G P + TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
S++ G+C +G A ++L+ M+ R P TYN F K GK +A LY +M+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR 354
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY+ ++ CK+D+LD A + M +GC D+ T T LI C + D+
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 414
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSMELLDS 392
+M RRGLV + +T+ L F G A L M S + LLD
Sbjct: 415 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 474
Query: 393 RCKD 396
C +
Sbjct: 475 LCDN 478
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A+E + + L + P YN +++G+ + + AE +
Sbjct: 328 YNALINAFVKEGKFFEAAELYDEM--LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 385
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +P+V T+ TL++GYC +R+D + L+ EM + G+ N + YNT+I G G
Sbjct: 386 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 445
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+ ++ + P +VT +L+ G C G L+ A ++ K M
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T LI+ C+ + D+ F +M RRG+V + + L
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Query: 364 FKKRG 368
F+K G
Sbjct: 626 FRKVG 630
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 13/297 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA + F+ + +P V + L++G+ +K + D E
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMAT--KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 420
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + N VTY TL+ G+C + ++ A+ L ++M G+ P+ + NT++DGL + G+
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 480
Query: 195 FEEVSGMMERFL-------VCEP----GPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++ M + P P ++TY L+ G G A ++ + M R
Sbjct: 481 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 540
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TY+ K ++++A ++ M ++P+ +T++ L+ CK ++D
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 600
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ EM RG D LI+ ++ + A F++MI G+ P +T + +
Sbjct: 601 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 13/282 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D C R+ E H+ + YN L++G+ ++ A +
Sbjct: 398 FTTLIDGYCGAKRIDDGMELLHEMPR--RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-----------GIEPNAIVYN 183
M V P++VT TL++G C ++ A+ + K M+K G+EP+ + YN
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 515
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL+ G+F E + E P +TY+S++ G CK L+ A+++ M S+
Sbjct: 516 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 575
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
F P+ T+N + K G+V+D + L+ +M G D + Y L+ K ++ A
Sbjct: 576 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 635
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+ + +EM G D T ++ + + A A ED+
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ + +V N + L+ C G + AA +
Sbjct: 397 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN----TVTYNTLIHGFCLVGDLNAALDL 452
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
++ + P + N LL+G + +KDA + M+K V P+
Sbjct: 453 --SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 510
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V+TY L+ G + A L +EM GI P+ I Y+++IDGL + R +E + M
Sbjct: 511 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 570
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+ +L+ GYCKAG ++ ++ M RG + Y F K G
Sbjct: 571 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 630
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L +++L+ A+ + ++++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 11/274 (4%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ + ++ ++ L++ +C ++ A+ ++ K G+ P+ + + T++ GL
Sbjct: 101 LYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R E + P +VT+T+L+ G C+ G + A +L M+ G P+
Sbjct: 161 VEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G A+NL RKM E S P+ + Y ++ LCK+ + A + E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ +G DL T +I C ++ +A ++M+ R + P +T+ L + F K G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 370 TALAQKLCNVMSSVPRSM--------ELLDSRCK 395
A +L + M +PR + ++D CK
Sbjct: 341 FFEAAELYDEM--LPRGIIPNTITYNSMIDGFCK 372
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ L +G+ A E + + + P Y+ +++G + + +A + ++
Sbjct: 514 YNILICGLINEGKFLEAEELYEEMPH--RGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 571
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ +PNVVT+ TL+ GYC+ RVD + L EM + GI +AI+Y T+I G + G
Sbjct: 572 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 631
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK-MMISRGF 245
+ + + P +T +++ G+ +LE A +L+ + +S G+
Sbjct: 632 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGY 683
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L G+ + LE A + M+ LPS + + + + ++LY+KM
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
D +++IL+K C KL A+ ++ G D+ T T L+H LC + EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F M P+ +TF L + + G A L + M
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 179/351 (50%), Gaps = 21/351 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ V KA+ + A + PD VS +T L+ + +AG V+ A+ F
Sbjct: 108 LLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNT---LMNGFFKAGDVKKALALFGEMK 164
Query: 61 NLDMVKNFDSGASLF---EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
DSG ++ I+L LC G++ A E F K++ ++P + Y I+++
Sbjct: 165 --------DSGIAVLRSHNIVLRGLCSGGKISMAWEVF---KDMSGIFSPNLISYTIMID 213
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G +S+ V A + +M + + P+VVTYG L++G + RRV A L +E R +G P
Sbjct: 214 GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 273
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASK 235
+ YNT+IDGL + GR E + + +V EP P M TY++L+ G + E A +
Sbjct: 274 TVVTYNTMIDGLCKCGRIENALTLYDD-MVREPHLKPDMFTYSALINGLNLSNRGEKAYE 332
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKIL 294
+ + M+ G P TYN K G + AM ++RKM + + P+ +TY +L+
Sbjct: 333 LYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRF 392
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
CK D+L A++++KEM+ R D T T +I LC+ + DEA FE +
Sbjct: 393 CKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI 443
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 190/392 (48%), Gaps = 25/392 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
KV+ + + ++AW + + G + ++ T L+ Y +A VE A F+
Sbjct: 74 KVIHRIPDPNTAWEVF--QWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQS---- 127
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
M F+ + L++ K G VK A F E+ S +R +NI+L G
Sbjct: 128 HMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF---GEMKDSGIAVLRSHNIVLRGLCSG 184
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ A + +M +PN+++Y +++G C+ R+VD+AI L K+M + I P+ + Y
Sbjct: 185 GKISMAWEVFKDMSG-IFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTY 243
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+IDGL + R +E + E PT+VTY +++ G CK G +E A + M+
Sbjct: 244 GALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVR 303
Query: 243 RGFL-PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
L P TY+ + + E A LY +M+++G +PD +TY+ LL LCK D
Sbjct: 304 EPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCED 363
Query: 302 LAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A+++ ++M CD ++ T T+LI C++ + +A ++M R L+P +TF
Sbjct: 364 KAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTF--- 420
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
T + QKLC S + + EL +S
Sbjct: 421 ---------TTVIQKLCK-ESRIDEAHELFES 442
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 163/351 (46%), Gaps = 43/351 (12%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
I++R G + A F+ DM F + I++D LCK +V A F
Sbjct: 176 IVLRGLCSGGKISMAWEVFK-----DMSGIFSPNLISYTIMIDGLCKSRKVDKAITLF-- 228
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
++ +D++ P V Y L++G + + VK+A + E R + P VVTY T+++G C+
Sbjct: 229 KQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKC 288
Query: 158 RRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
R++ A+ L +M R+ ++P+ Y+ +I+GL + R E+ + E L P +VT
Sbjct: 289 GRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVT 348
Query: 217 YTSLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
Y +L+ G CK+G + A +I KM + P+ TY F K ++ DA+ L ++M
Sbjct: 349 YNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLA------------------------------IQ 305
PD +T+ +++ LCKE ++D A I
Sbjct: 409 EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRID 468
Query: 306 VSKEMKCR----GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+K++ R GC L T T L+ CR ++ +A + +MI G P
Sbjct: 469 DAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 141/320 (44%), Gaps = 45/320 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K+++ D A L + PD V T+ LI + V+ A FE A
Sbjct: 211 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVV---TYGALIDGLGKQRRVKEAYDLFEEAR 267
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF-------HKRKE------------- 100
K + ++D LCK GR++ A + H + +
Sbjct: 268 ----AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNL 323
Query: 101 --------------LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT-PNVV 145
LD +P V YN LL+G +S A + +M NV PNV+
Sbjct: 324 SNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVI 383
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L++ +C++ R+ A++L KEM + P+A+ + TVI L + R +E + E
Sbjct: 384 TYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI 443
Query: 206 -LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
C+P V + +++ GYCK ++ A K+ M+ G P+ TY F + G+
Sbjct: 444 GKTCKPDS--VLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGR 501
Query: 265 VEDAMNLYRKMIESGYTPDR 284
DA+ +Y +MIE G+ P+R
Sbjct: 502 YSDALIMYHEMIEMGFPPER 521
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 175/348 (50%), Gaps = 6/348 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I I+ + R G AA+ N+ ++ F S A + ++ + G A E
Sbjct: 227 TYTIRIKSFCRTGRPYAAL---RLLRNMPVLGCF-SNAVAYCTVVTGFYEFGDNDRAREL 282
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + L+ P V +N L++ + V ++ER + ++ K V PN+ T+ ++G
Sbjct: 283 FDEM--LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +DRA+RL+ + +EG+ P+ + YNTVI GL R E + + + P
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY S++ GYCK G + A++ILK + +GF P TY F + G + AM +++
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G P + Y+ L+K LC++ + A+Q+ EM +GC D+ T ++I+ LC+M
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+A+ D I +G +P T+ L D + ++ A +L N M S
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWS 568
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 161/328 (49%), Gaps = 9/328 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ + + G + A+ F+ + K ++ L+ LC+QG + A +
Sbjct: 437 TYCSLVNGFCQDGDPDQAMAVFKDG----LGKGLRPSIIVYNTLIKGLCQQGLILPALQL 492
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++ E + P + YN+++NG + + DA + + P++ TY TLV+GY
Sbjct: 493 MNEMAE--KGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGY 550
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR ++D AI LV M +G+ P+ I YNT+++GL + + EEV + + P +
Sbjct: 551 CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 610
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY ++++ C + + A +L M S+G P ++ F K G ++ A L+R
Sbjct: 611 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 670
Query: 275 MIESGY--TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M E Y + TY+I++ ++ + +A+++ EMK GCD D T +LI C+
Sbjct: 671 M-EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKT 729
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ + I +G +P TF R+
Sbjct: 730 GNVNQGYKFLLENIEKGFIPSLTTFGRV 757
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 161/334 (48%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF I I+ + G ++ A+ + + + ++ LC++ RV A E
Sbjct: 332 TFNIFIQGLCKEGSLDRAVRLLGCVSR----EGLRPDVVTYNTVICGLCRKSRVVEAEEC 387
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
HK ++ + P YN +++G+ + V DA R + + P+ TY +LV G+
Sbjct: 388 LHKM--VNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ D+A+ + K+ +G+ P+ IVYNT+I GL + G +M P +
Sbjct: 446 CQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDI 505
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY ++ G CK G L A+ ++ I++G +P TYN + + K++ A+ L +
Sbjct: 506 WTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G TPD +TY+ LL LCK K + +++ K M +GC ++ T +I LC K
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA +M +GL P ++F L F K G
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVG 659
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+V +R Y R G ++ A+ TFE +D+ N D + +++ L + G A + +
Sbjct: 158 YVEAMRFYGRKGKIQEAVDTFE---RMDLF-NCDPSVYSYNAIMNILVEFGYFNQAHKVY 213
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ K D+ V Y I + + R+ A R M N V Y T+V G+
Sbjct: 214 MRMK--DKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFY 271
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
DRA L EM + + P+ +N ++ L + G E + ++ L P +
Sbjct: 272 EFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLF 331
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+ ++G CK G L+ A ++L + G P TYN + +V +A KM
Sbjct: 332 TFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM 391
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G+ P+ TY+ ++ CK+ + A ++ K+ +G D T L++ C+
Sbjct: 392 VNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDP 451
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
D+A A F+D + +GL P + + L ++G+ A +L N M+
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA 497
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 10/287 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K A L+ D I +PD + +T L+ Y R +++AI E N
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT---LVDGYCRQLKLDSAI---ELVN 564
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + LL+ LCK + + E F E + AP + YN ++
Sbjct: 565 RM-WSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE--KGCAPNIITYNTIIESLC 621
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNA 179
SK V +A EM+ + +TP+VV++GTL+ G+C++ +D A L + M K+ +
Sbjct: 622 NSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTT 681
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN +I E + + P TY L+ G+CK G++ K L
Sbjct: 682 ATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLE 741
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
I +GF+PS TT+ KV++A+ + M++ PD +
Sbjct: 742 NIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 10/220 (4%)
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV--TYTS 219
R ++L+K+ K+G + Y +++ L G+F E+ ++ + T++ Y
Sbjct: 103 RNLQLIKKT-KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSE-MRSNLDNTLLEGVYVE 160
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++ Y + G ++ A + M PS +YN +FG A +Y +M +
Sbjct: 161 AMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKK 220
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF---D 336
D TY I +K C+ + A+++ + M GC + ++ Y+F D
Sbjct: 221 VESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGC---FSNAVAYCTVVTGFYEFGDND 277
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A F++M+ L P TF +L K+G +++L
Sbjct: 278 RARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERL 317
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 162/331 (48%), Gaps = 7/331 (2%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F + T L+ +A +E + W FE M + LF +++ CK G+V+
Sbjct: 276 FPTVKTCTFLLSSLVKANELEKSYWVFE-----TMRQGVSPDVYLFSTAINAFCKGGKVE 330
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + F ++L S P V YN L++G + N+ +A RF +M K+ V ++TY
Sbjct: 331 DAIQLFFDMEKLGVS--PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 388
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ G +L + + A ++KE ++G PN +VYNT+IDG + G + + +
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 448
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P VT S+++G+CK G +E A IL+ M+SRGF +P + + + E A+
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 508
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
R+M+ P+ L+ LCKE K A+++ + +G +L T+ LIH L
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 568
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C+ EA + M+ RG V +T+ L
Sbjct: 569 CKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 186/415 (44%), Gaps = 53/415 (12%)
Query: 1 MIKVLAKAKEFD-SAWCLLLDKIGGHEVPDFVSKDT--FVILIRRYARAGMVEAAIWTFE 57
++ L KA E + S W + G VS D F I + + G VE AI F
Sbjct: 285 LLSSLVKANELEKSYWVFETMRQG-------VSPDVYLFSTAINAFCKGGKVEDAIQLF- 336
Query: 58 FANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
DM K + L+ LCK G + A + K K + T+ Y++L+
Sbjct: 337 ----FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRF--KEKMVKDGVNATLITYSVLI 390
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG + + +A E ++ TPN V Y TL++GYC++ + A+R+ +M +GI
Sbjct: 391 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 450
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLV----CEPG--------------------- 211
PN++ N++I G + G+ E+ ++E L PG
Sbjct: 451 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 510
Query: 212 ----------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
P T+LV G CK G A ++ ++ +GF + T N K
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G +++A+ L +KM+E G+ D++TY+ L+ CKE K++ ++ EM +G + D T
Sbjct: 571 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+LIH +CR+ K DEA + + R LVP+ T+ + D + K +KL
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%), Gaps = 8/272 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVK 89
+ K T+ LI + G VE F +MVK + + +L+ +C+ G++
Sbjct: 591 LDKITYNTLISGCCKEGKVEEG-----FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 645
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A +++ K D P V Y ++++G+ ++ +++ E+ + E+ +N+ N V Y T
Sbjct: 646 EAVNLWNECKSRD--LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 703
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ YCR A +L +MR +GI P Y+++I G+ GR E+ +++
Sbjct: 704 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 763
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +V YT+L+ GYCK G ++ +L+ M S P+ TY +SK G ++ A
Sbjct: 764 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 823
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
L +M+ G PD +TY++L CKE K++
Sbjct: 824 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 132/250 (52%), Gaps = 8/250 (3%)
Query: 21 KIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
K+ G V + DTF +LI R G ++ A+ + + D+V N + + ++
Sbjct: 614 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT----YGVM 669
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+D CK +++ + F + L Q+ VYN L+ + R+ N +A + +MR +
Sbjct: 670 IDGYCKADKIEEGEKLFTEL--LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK 727
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ P TY +L+ G C + R++ A L+ EMRKEG+ PN + Y +I G + G+ ++V
Sbjct: 728 GIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 787
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+++ + P +TYT ++ GY K+GD++ A+K+L M+ +G +P TYN
Sbjct: 788 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 847
Query: 259 FSKFGKVEDA 268
F K GK+E+
Sbjct: 848 FCKEGKIEEG 857
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 2/303 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K F + L+ LCK G ++ A +K L++ + YN L++G + V
Sbjct: 552 KGFGANLVTTNALIHGLCKTGNMQEAVRLL--KKMLERGFVLDKITYNTLISGCCKEGKV 609
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
++ + EM K+ + P+ TY L+ G CR+ ++D A+ L E + + PN Y +
Sbjct: 610 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 669
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG +A + EE + L V Y +L++ YC+ G+ A K+ M S+G
Sbjct: 670 IDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 729
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P+ TY+ G++EDA L +M + G P+ + Y L+ CK ++D +
Sbjct: 730 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 789
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
V +EM + T T++I + A+ +M+ +G+VP +T+ L + F
Sbjct: 790 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849
Query: 366 KRG 368
K G
Sbjct: 850 KEG 852
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 152/317 (47%), Gaps = 2/317 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+++N L L+ LCK+G+ A E + + L++ + + N L++G ++
Sbjct: 515 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL--LEKGFGANLVTTNALIHGLCKTG 572
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N+++A R +M + + +TY TL+ G C+ +V+ +L EM K+GIEP+ YN
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 632
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I G+ G+ +E + + P + TY ++ GYCKA +E K+ ++++
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+ YN R + + G +A L+ M G P TY L+ +C +++ A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ EM+ G ++ T LI C++ + D+ ++M + P+ +T+ + D
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 812
Query: 364 FKKRGMTALAQKLCNVM 380
+ K G A KL + M
Sbjct: 813 YSKSGDMKTAAKLLHEM 829
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 4/273 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+ CK+G+V+ E F R E+ Q P YN+L++G R + +A W
Sbjct: 596 YNTLISGCCKEGKVE---EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 652
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E + ++ PNV TYG +++GYC+ +++ +L E+ + +E N++VYNT+I G
Sbjct: 653 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 712
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E + + PT TY+SL+ G C G +E A ++ M G LP+ Y
Sbjct: 713 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 772
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ K G+++ +N+ ++M P+++TY +++ K + A ++ EM +
Sbjct: 773 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
G D T +L + C+ K +E ED +
Sbjct: 833 GIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGV 865
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 162/362 (44%), Gaps = 16/362 (4%)
Query: 29 DFVSKD------TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
D VSK T +I+ + + G +E A E + + F F ++ L
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM----LSRGFSINPGAFTTIIHWL 498
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C R ++A + R+ L ++ P + L+ G + DA W + ++
Sbjct: 499 CMNSRFESALRFL--REMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 556
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N+VT L+ G C+ + A+RL+K+M + G + I YNT+I G + G+ EE G
Sbjct: 557 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE--GFK 614
Query: 203 ERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
R + + G P TY L+ G C+ G L+ A + SR +P+ TY +
Sbjct: 615 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 674
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K K+E+ L+ +++ + + Y+ L++ C+ A ++ +M+ +G
Sbjct: 675 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 734
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T + LIH +C + + ++A ++M + GL+P+ + + L + K G + M
Sbjct: 735 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 794
Query: 381 SS 382
SS
Sbjct: 795 SS 796
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 4/242 (1%)
Query: 144 VVTYGTLVEGYC-RLRRVD--RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
V L+ YC + R V AI + + + +G+ P ++ LV+A E+
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ E + P + +++ + +CK G +E A ++ M G P+ TYN
Sbjct: 301 VFET-MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 359
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G +++A KM++ G +TY +L+ L K +K + A V KE +G +
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LI C+M +A DM+ +G+ P+ +T + F K G A+ + M
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479
Query: 381 SS 382
S
Sbjct: 480 LS 481
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 23/353 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAA--IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
PD ++ TFV GM + + ++ + + ++ ++D LCK
Sbjct: 215 PDQITYGTFV--------DGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR + F + + D+ P + YN ++ G+ S A+R EM + ++PNVV
Sbjct: 267 GRHSDSHNLFIEMQ--DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ + + + A L EM GI PN I YN++IDG + R + M
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P + T+T+L+ GYC A ++ ++L M RG + + TYN F G +
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-----------CRG 314
A++L ++MI SG PD +T + LL LC KL A+++ K M+ G
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ D+ T +LI L KF EA +E+M RG+VP +T+ + D K+
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 163/364 (44%), Gaps = 48/364 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V + LL+G V +A L+
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKL--GLHPDVVTFTTLLHGLCLDHRVSEA----LD 172
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
+ + P+V+T+ TL+ G CR RV A+ L+ M + G++P+ I Y T +DG+ + G
Sbjct: 173 LFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EE+S + ++ C+ G P +VTY
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ G+C +G A ++L+ M+ R P+ TYN F K GK +A LY +M+
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY+ ++ CK+D+LD A + M +GC D+ T T LI C + D+
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSMELLDS 392
+M RRGLV + +T+ L F G A L M S + LLD
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472
Query: 393 RCKD 396
C +
Sbjct: 473 LCDN 476
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A+E + + L + P YN +++G+ + + AE +
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEM--LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 383
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +P+V T+ TL++GYC +R+D + L+ EM + G+ N + YNT+I G G
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+ ++ + P +VT +L+ G C G L+ A ++ K M
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T LI+ C+ + D+ F +M RRG+V + + L
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 364 FKKRG 368
F+K G
Sbjct: 624 FRKVG 628
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 13/297 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA + F+ + +P V + L++G+ +K + D E
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMAT--KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + N VTY TL+ G+C + ++ A+ L ++M G+ P+ + NT++DGL + G+
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 195 FEEVSGMMERFL-------VCEP----GPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++ M + P P ++TY L+ G G A ++ + M R
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TY+ K ++++A ++ M ++P+ +T++ L+ CK ++D
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ EM RG D LI+ ++ + A F++MI G+ P +T + +
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 655
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 13/282 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D C R+ E H+ + YN L++G+ ++ A +
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPR--RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-----------GIEPNAIVYN 183
M V P++VT TL++G C ++ A+ + K M+K G+EP+ + YN
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL+ G+F E + E P +TY+S++ G CK L+ A+++ M S+
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
F P+ T+N + K G+V+D + L+ +M G D + Y L+ K ++ A
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+ + +EM G D T ++ + + A A ED+
Sbjct: 634 LDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ + +V N + L+ C G + AA +
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN----TVTYNTLIHGFCLVGDLNAALDL 450
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
++ + P + N LL+G + +KDA + M+K V P+
Sbjct: 451 --SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 508
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V+TY L+ G + A L +EM GI P+ I Y+++IDGL + R +E + M
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+ +L+ GYCKAG ++ ++ M RG + Y F K G
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L +++L+ A+ + ++++
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 50/325 (15%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE- 173
L +G + K ++DA + +M + P+V+ + L+ R+ R D I L ++M ++
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 174 ----------------------------------GIEPNAIVYNTVIDGLVEAGRFEEVS 199
G+ P+ + + T++ GL R E
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ + +C P ++T+T+L+ G C+ G + A +L M+ G P TY F
Sbjct: 172 DLFHQ--ICR--PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 260 SKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K G A+NL RKM E S P+ + Y ++ LCK+ + + + EM+ +G +
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ T +I C ++ A ++M+ R + P+ +T+ L + F K G A +L +
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 379 VMSSVPRSM--------ELLDSRCK 395
M +PR + ++D CK
Sbjct: 348 EM--LPRGIIPNTITYNSMIDGFCK 370
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ L +G+ A E + + + P Y+ +++G + + +A + ++
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPH--RGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ +PNVVT+ TL+ GYC+ RVD + L EM + GI +AI+Y T+I G + G
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK-MMISRGF 245
+ + + P +T +++ G+ +LE A +L+ + +S G+
Sbjct: 630 INGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGY 681
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 186/403 (46%), Gaps = 27/403 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA + D A +L + VPD V+ ++ V + + R I F+
Sbjct: 161 LINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSP 220
Query: 61 NLDM-----------VKNFDSGASLFEILLDSLCKQ------------GRVKAASEYFHK 97
N+ ++ +S L E ++ + CK R + SE
Sbjct: 221 NVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKL 280
Query: 98 RKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
L Q + P V YNIL++G + V +A + + K + P+ +TY ++G C+
Sbjct: 281 FGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 340
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
RV+ A+ ++K+M ++G P+ + +N VI+GL + R +E ++ P ++
Sbjct: 341 AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAIS 400
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF---GKVEDAMNLYR 273
+ +L+ G C+AG + A K M+ RG P+ TYN K G++++A+ L+
Sbjct: 401 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
MIE G PD +TY L+ L K KLD A ++ M+ +GC ++ T LI LC +
Sbjct: 461 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLD 520
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K DEA F M+ +G VP +T+ + K+ M A L
Sbjct: 521 KVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALAL 563
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 15/308 (4%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+V+ + A ILL SL K G+++ A + ++L + +NI ++G R+
Sbjct: 8 LVRIYSPDAYTVGILLRSLLKSGKIEKAHRFV---EQLLVKGLCDISTFNIYISGLCRAS 64
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ DA+ + MRK PN +TY L+ G C R+ A L + M K G P+ + YN
Sbjct: 65 RIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYN 124
Query: 184 TVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
T++ G + G+ +E G ++R V P +VTY +L+ G+CKA L+ A +IL+
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFV----PDVVTYNALINGFCKADKLDEAQRILQR 180
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE-D 298
M+S +P TYN K G+V++A L +++ G++P+ +TY L+ LC+E
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELR 237
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+L+ A Q+ ++M GC D+ + LIH L R EA F ++R+G P T+
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297
Query: 359 RLNDEFKK 366
L D K
Sbjct: 298 ILIDGLLK 305
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 170/350 (48%), Gaps = 17/350 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS + LI AR V A+ F + + ++ + IL+D L K+ R
Sbjct: 256 PDIVSYNA---LIHGLAREQGVSEALKLFGSV----LRQGYEPEVPTYNILIDGLLKEDR 308
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A E F + P Y + ++G ++ V+DA +M ++ P+VV++
Sbjct: 309 VNEAFELFSGL--VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ G C+ +RVD A L+ M +G PNAI +NT+I G AG++++ + L
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426
Query: 208 CEPGPTMVTYTSLVKGYCKA---GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
PT+VTY LV G CKA G ++ A + MI +G +P TY+ K GK
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
++DA L M G P+ TY+ L+ LC DK+D A+++ M +GC D T
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+I LC+ D+A A F+ + G+VP + L D G+ A+A+
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID-----GLCAVAR 591
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 152/287 (52%), Gaps = 6/287 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL CK G++ A + F + + + P V YN L+NG+ ++ + +A+R
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDG--AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV-EAG 193
M E++ P+VVTY +LV G C+ RVD A L+ + +G PN I Y+T+I GL E
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELR 237
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R E ++E+ ++ P +V+Y +L+ G + + A K+ ++ +G+ P TYN
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K +V +A L+ +++ G PD +TY + + LCK +++ A+ + K+M +
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
GC D+ + +I+ LC+ + DEA M +G P+ ++F L
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 169/335 (50%), Gaps = 11/335 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T IL+R ++G +E A F L +VK S F I + LC+ R+ A
Sbjct: 18 TVGILLRSLLKSGKIEKA---HRFVEQL-LVKGL-CDISTFNIYISGLCRASRIGDAQTV 72
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F ++ + P YN LL+G + DA+ + M K +P+VVTY TL+ G+
Sbjct: 73 FDGMRK--HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ ++D A+++ K G P+ + YN +I+G +A + +E +++R + P +
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK-FGKVEDAMNLYR 273
VTY SLV G CK G ++ A +++ +GF P+ TY+ + ++E A L
Sbjct: 191 VTYNSLVNGLCKNGRVDEARM---LIVDKGFSPNVITYSTLISGLCRELRRLESARQLLE 247
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+ +G PD ++Y+ L+ L +E + A+++ + +G + ++ T +LI L +
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ +EA F +++ GL P +T+ D K G
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 342
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 22/287 (7%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL-----LDSL 82
PD + T+ + I +AG VE A+ M+K+ D + +++ ++ L
Sbjct: 326 PDAI---TYTVFIDGLCKAGRVEDALL---------MLKDMDEKGCVPDVVSHNAVINGL 373
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK+ RV A + + +P +N L+ G R+ K A + EM K V P
Sbjct: 374 CKEKRVDEAEVLLSGMEA--KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431
Query: 143 NVVTYGTLVEGYCRLR---RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VVTY LV+G C+ R R+ AI L M ++G P+ + Y+ +IDGL +AG+ ++
Sbjct: 432 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 491
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
++ P + TY SL+ G C ++ A ++ M+ +G +P TY
Sbjct: 492 RLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
K V+ A+ L+ +E+G P Y L+ LC ++D A+++
Sbjct: 552 CKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLV---CEPGPTMVTYTSLVKGYCKAGDLEGA 233
P+A ++ L+++G+ E+ +E+ LV C+ + T+ + G C+A + A
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCD----ISTFNIYISGLCRASRIGDA 69
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ M GF P+ TYN G++ DA LY +MI++GY+PD +TY+ LL
Sbjct: 70 QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
CK KLD A+++ RG D+ T LI+ C+ K DEA + M+ LVP
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189
Query: 354 YLTFKRLNDEFKKRG 368
+T+ L + K G
Sbjct: 190 VVTYNSLVNGLCKNG 204
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 14/242 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K D A LL P+ +S +T LI RAG + A+ TF+
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT---LICGQCRAGKWKKAMTTFK--- 422
Query: 61 NLDMVK-NFDSGASLFEILLDSLCK---QGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+M+K + IL+D LCK +GR+K A F +++ P V Y+ L+
Sbjct: 423 --EMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM--IEKGRVPDVVTYSALI 478
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G ++ + DA R M + PNV TY +L+ G C L +VD A+ L M ++G
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ I Y T+I L + ++ + + L PT Y SL+ G C ++ A K+
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Query: 237 LK 238
L+
Sbjct: 599 LQ 600
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P T L++ K+G +E A + ++ ++ +G L +T+N + + ++ DA +
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTV 72
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ M + G+ P+R+TY+ LL LC ++ A + + M G D+ T L+H C+
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM- 387
+ K DEA F+ ++RG VP +T+ L + F K AQ++ M S VP +
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192
Query: 388 --ELLDSRCKD 396
L++ CK+
Sbjct: 193 YNSLVNGLCKN 203
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 184/376 (48%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L A +L D G P+ V+ +T L+ + RAG V+ A
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT---LVAAFFRAGEVDGAERLVGMMR 252
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N + F +++ +CK G+++ A + F + + + AP YN L+ G+
Sbjct: 253 EGGLKPNLVT----FNSMVNGMCKAGKMEDARKVFDEM--VREGLAPDGVSYNTLVGGYC 306
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +A + EM ++ + P+VVT+ +L+ C+ ++RA+ LV++MR+ G++ N +
Sbjct: 307 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +IDG + G ++ + C P++V Y +L+ GYC G ++ A ++L M
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++G P TY+ + K A L ++M+E G PD +TY L+++LC E +L
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + K M G D T T LI C+ + A + + M++ G++P +T+ L
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546
Query: 361 NDEFKKRGMTALAQKL 376
+ K AQ+L
Sbjct: 547 INGLSKSARAMEAQQL 562
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L AP V YNIL+ + K+A +MR PNVVTY TLV + R V
Sbjct: 182 LSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEV 241
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A RLV MR+ G++PN + +N++++G+ +AG+ E+ + + + P V+Y +L
Sbjct: 242 DGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTL 301
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
V GYCKAG A + M +G +P T+ K G +E A+ L R+M E G
Sbjct: 302 VGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGL 361
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMK-CRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ +T+ L+ CK+ LD A+ + MK CR + LI+ C + + DEA
Sbjct: 362 QMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR-IKPSVVCYNALINGYCMVGRMDEAR 420
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+M +GL P +T+ + + K
Sbjct: 421 ELLHEMEAKGLKPDVVTYSTIISAYCK 447
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 37/329 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ +LC +G K A R P V YN L+ +FR+ V AER
Sbjct: 193 YNILVRALCGRGHRKEALSIL--RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGM 250
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR+ + PN+VT+ ++V G C+ +++ A ++ EM +EG+ P+ + YNT++ G +AG
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310
Query: 195 FEEV----------------------------SGMMERFLVC-----EPGPTM--VTYTS 219
E +G +ER + E G M VT+T+
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G+CK G L+ A ++ M PS YN + G++++A L +M G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD +TY ++ CK A +++++M +G D T + LI +LC + +A
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
F++MI+ GL P T+ L D K G
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ P+V YN +L ++ A RF+ M + V PNV TY LV C A+
Sbjct: 152 YVPSVLAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF---EEVSGMMERFLVCEPG--PTMVTYTS 219
++++MR G PN + YNT++ AG E + GMM E G P +VT+ S
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMR-----EGGLKPNLVTFNS 265
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+V G CKAG +E A K+ M+ G P +YN + K G +A++++ +M + G
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD +T+ L+ ++CK L+ A+ + ++M+ RG ++ T T LI C+ D+A
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
M + + P + + L + + G A++L + M +
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA 428
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 24/365 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V TF LI +AG +E A+ + N F L+D CK+G
Sbjct: 327 MPDVV---TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMN----EVTFTALIDGFCKKG 379
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A K+ P+V YN L+NG+ + +A EM + + P+VVT
Sbjct: 380 FLDDALLAVRGMKQC--RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVT 437
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ YC+ A L ++M ++G+ P+AI Y+++I L R + + + +
Sbjct: 438 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMI 497
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYTSL+ G+CK G++E A + M+ G LP TY+ SK +
Sbjct: 498 KLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 557
Query: 267 DAMNLYRKMIESGYTPDRLTYH---------------ILLKILCKEDKLDLAIQVSKEMK 311
+A L K+ P Y LLK C + ++ A +V + M
Sbjct: 558 EAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSML 617
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
R ++D ++LIH CR +A + + M++ G P+ + L + GM
Sbjct: 618 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVV 677
Query: 372 LAQKL 376
A ++
Sbjct: 678 EADQV 682
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 132/293 (45%), Gaps = 17/293 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ + CK +A E ++ L++ P Y+ L+ K + DA +
Sbjct: 438 YSTIISAYCKNCDTHSAFEL--NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKN 495
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K + P+ TY +L++G+C+ V+ A+ L +M K G+ P+ + Y+ +I+GL ++ R
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSL---------------VKGYCKAGDLEGASKILKM 239
E ++ + +P P Y +L +KG+C G + A K+ +
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 615
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ R + + Y+ + G V A++ +++M++ G+ P+ + L++ L +
Sbjct: 616 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGM 675
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ A QV +++ D + S LI L D M + GL+P
Sbjct: 676 VVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 22/263 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+VL K A L + I PD + T+ LI + + G VE+A+ +
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPD---EFTYTSLIDGHCKEGNVESALSLHD--- 529
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT----------- 108
MVK + +L++ L K R A + K D A T
Sbjct: 530 --KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRK 587
Query: 109 --VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
++ LL G+ + +A++ + M N + Y L+ G+CR V +A+
Sbjct: 588 AELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSF 647
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
K+M + G PN+ ++I GL E G E ++++ L +L+
Sbjct: 648 HKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLN 707
Query: 227 AGDLEGASKILKMMISRGFLPSP 249
G+++ +L M G LPSP
Sbjct: 708 EGNVDAVLDVLHGMAKDGLLPSP 730
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 177/368 (48%), Gaps = 10/368 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDK-IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ + + A + DK I VPD TF L+ + G+ +A+ E
Sbjct: 352 LVNGFVRNGRLNEATAFVYDKMINNGYVPDVF---TFSTLVNGLCKKGLFGSAL---ELV 405
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N++D K + + IL+D CK+G+++ A R+ L + ++ YN L++
Sbjct: 406 NDMD-AKGCKPNLNTYTILIDGFCKKGQLEEAGLIL--REMLTKGFSLNTVGYNALISAL 462
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A + EM + P++ T+ +L+ G CR+ ++ A+ L ++M EG+ N+
Sbjct: 463 CKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANS 522
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +NT+I + G +E ++ L +TY L+K CK G +E + +
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G PS T N F GKV +A+ R MI G++PD +TY+ L+ LCK +
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ A+ + ++++ G D T LI LCR FD+A + G VP+ +T+
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNI 702
Query: 360 LNDEFKKR 367
L F K+
Sbjct: 703 LVYNFGKQ 710
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 162/308 (52%), Gaps = 7/308 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D+L K+ RV A + + P V +N ++ G+ R V + +
Sbjct: 247 IYQTLIDALSKRDRVDEALKLLEEM--FLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVD 304
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + TPN +TYG L+ G C+ R+D A L+ ++ PN + +NT+++G V G
Sbjct: 305 RMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNG 360
Query: 194 RFEEVSGMM-ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R E + + ++ + P + T+++LV G CK G A +++ M ++G P+ TY
Sbjct: 361 RLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTY 420
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
F K G++E+A + R+M+ G++ + + Y+ L+ LCK K+ A+ + EM
Sbjct: 421 TILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSS 480
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+GC D+ T LI LCR+ + ++A A + DM+ G++ + +TF L F +RG
Sbjct: 481 KGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQE 540
Query: 373 AQKLCNVM 380
A KL N M
Sbjct: 541 ALKLVNDM 548
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 168/371 (45%), Gaps = 18/371 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K D A LL + PD +TF +I + R V E A
Sbjct: 251 LIDALSKRDRVDEALKLLEEMFLMGCPPDV---NTFNTVIYGFCRLNRV------LEGAK 301
Query: 61 NLD--MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+D ++K F + L+ LCK R+ A K P V +N L+NG
Sbjct: 302 LVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP------GPNVVHFNTLVNG 355
Query: 119 WFRSKNVKDAERF-WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ R+ + +A F + +M P+V T+ TLV G C+ A+ LV +M +G +P
Sbjct: 356 FVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKP 415
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N Y +IDG + G+ EE ++ L V Y +L+ CK G + A +
Sbjct: 416 NLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMF 475
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M S+G P T+N + ++EDA+ LYR M+ G + +T++ L+ +
Sbjct: 476 GEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRR 535
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++ A+++ +M RGC +D T LI LC+ ++ FE+MIR+GL P +T
Sbjct: 536 GEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITC 595
Query: 358 KRLNDEFKKRG 368
L + F G
Sbjct: 596 NILINGFCTAG 606
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 144/294 (48%), Gaps = 1/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ + GR+ A+ + + K ++ + P V ++ L+NG + A +
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYD-KMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN+ TY L++G+C+ +++ A +++EM +G N + YN +I L + G+
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E M P + T+ SL+ G C+ ++E A + + M+ G + + T+N
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G++++A+ L M+ G D +TY+ L+K LCK ++ + + +EM +G
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ T +LI+ C K A DMI RG P +T+ L + KRG
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG 641
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 144/308 (46%), Gaps = 32/308 (10%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+ R YN++L+ A + +M + V+PN T+G +++ C + VD A L
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+++M K G PN+++Y T+ID L + R +E ++E + P + T+ +++ G+C+
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL--------------- 271
+ +K++ MI +GF P+ TY Y K ++++A L
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTL 352
Query: 272 -----------------YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
Y KMI +GY PD T+ L+ LCK+ A+++ +M +G
Sbjct: 353 VNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG 412
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C +L+T T+LI C+ + +EA +M+ +G + + + L K G A
Sbjct: 413 CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472
Query: 375 KLCNVMSS 382
+ MSS
Sbjct: 473 DMFGEMSS 480
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 13/320 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++DSLCK GR A F + +E + P + YN ++ G+ S DAE+
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVTY L+ + + + A L EM GI PN I Y+++IDG +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P ++T+ +L+ GYC A ++ ++L M G + TTYN
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
F G + A++L ++MI SG PD +T LL LC KL A+++ K M+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 312 ---------CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G + D+ T +LI L KF EA +E+M RG+VP +T+ + D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K+ A ++ + M S
Sbjct: 555 GLCKQSRLDEATQMFDSMGS 574
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 148/326 (45%), Gaps = 38/326 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V + LL+G V +A F+ +
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
M + PNVVT+ TL+ G CR R+ A+ L+ M ++G++P I Y T++DG+ + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EEVS ++ ++ C+ G P + TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
S++ G+C +G A ++L+ M+ R P TYN F K GK +A LY +M+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY ++ CK+++LD A + M +GC +L T LI C + D+
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEF 364
+M GLV T+ L F
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGF 440
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A E + + L + P Y+ +++G+ + + AE +
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +PN++T+ TL++GYC +R+D + L+ EM + G+ + YNT+I G G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+++ + P +VT +L+ G C G L+ A ++ K+M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T T LI+ C+ + D+ F +M RRG+V + +T+ L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 364 FKKRG 368
F+K G
Sbjct: 626 FRKVG 630
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC++GR+ A + E PT Y +++G + + A +
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMME--DGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 135 MRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + ++ PNVV Y +++ C+ R A L EM+++GI P+ YN++I G +G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R+ + +++ L + P +VTY +L+ + K G A ++ M+ RG +P+ TY+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K +++ A +++ M G +P+ +T++ L+ C ++D +++ EM
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D T LIH + + A ++MI GL P +T L D G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 374 QKLCNVMSSVPRSME 388
++ VM + ++
Sbjct: 485 LEMFKVMQKSKKDLD 499
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 137/272 (50%), Gaps = 1/272 (0%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+NIL+ + + A + ++ K + P+VVT+ TL+ G C RV A+ +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ PN + + T+++GL GR E +++R + PT +TY ++V G CK GD
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 232 GASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A +L KM +P+ Y+ K G+ DA NL+ +M E G PD TY+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C + A Q+ +EM R D+ T LI+ + KF EA +++M+ RG+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+P+ +T+ + D F K+ A+ + +M++
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 19/300 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA F+ + +P + +N L++G+ +K + D E
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + + TY TL+ G+ + ++ A+ L++EM G+ P+ + +T++DGL + G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 195 FEEVSGMMERFLVCEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ +E F V + P + TY L+ G G A ++ + M
Sbjct: 481 LKDA---LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG +P TY+ K ++++A ++ M ++P+ +T+ L+ CK ++
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D +++ EM RG + T LI ++ + A F++MI G+ P +T + +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ + +V + + + L+ G + AA +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD----TTTYNTLIHGFYLVGDLNAALDL 452
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
+ + P + + LL+G + +KDA + M+K V P+
Sbjct: 453 LQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V TY L+ G + A L +EM GI P+ I Y+++IDGL + R +E + M +
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+T+L+ GYCKAG ++ ++ M RG + + TY F K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L L +++L A+ + ++++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 129/274 (47%), Gaps = 11/274 (4%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ + ++ ++ L++ +C ++ A+ ++ K G+ P+ + + T++ GL
Sbjct: 101 LYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R E + P +VT+T+L+ G C+ G + A +L M+ G P+
Sbjct: 161 VEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G A+NL RKM E S P+ + Y ++ LCK+ + A + E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ +G DL T +I C ++ +A ++M+ R + P +T+ L + F K G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 370 TALAQKLCNVMSSVPRSM--------ELLDSRCK 395
A++L + M +PR + ++D CK
Sbjct: 341 FFEAEELYDEM--LPRGIIPNTITYSSMIDGFCK 372
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L G+ + LE A + M+ LPS + + + + ++LY+KM
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
D +++IL+K C KL A+ ++ G D+ T T L+H LC + EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F M P+ +TF L + + G A L + M
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ ++ V I R + + E +N + + ++DSLC+ G
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKME-------ERNVKADVFTYSTIIDSLCRDGC 243
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ AA F KE++ + +V YN L+ G ++ D +M + PNV+T
Sbjct: 244 IDAAISLF---KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A L KEM GI PN I YNT++DG R E + M++ +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +VT+TSL+KGYC ++ K+ + + RG + + TY+ + F + GK++
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L+++M+ G PD +TY ILL LC KL+ A+++ ++++ D+ + T +I
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++A F + +G+ P+ +T+ + K+G + A L
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 180/391 (46%), Gaps = 15/391 (3%)
Query: 12 DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
D A L + I +P V F I R + +V +F L++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV------LDFCKQLEL-NGIAHN 122
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
I+++ C+ + A K +L + P +N L+ G F V +A
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKL--GYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + P+VVTY ++V G CR A+ L+++M + ++ + Y+T+ID L
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + + ++VTY SLV+G CKAG + +LK M+SR +P+ T
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N F K GK+++A LY++MI G +P+ +TY+ L+ C +++L A + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
C D+ T T LI C + + D+ F ++ +RGLV + +T+ L F + G
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 372 LAQKLCNVMSS---VPRSME---LLDSRCKD 396
LA++L M S +P M LLD C +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 14/352 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I R G ++AAI F+ K S + L+ LCK G+ +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEME----TKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P V +N+LL+ + + +++A + EM ++PN++TY TL++GY
Sbjct: 286 L--KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEP 210
C R+ A ++ M + P+ + + ++I G R ++ + +R LV
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV--- 400
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
VTY+ LV+G+C++G ++ A ++ + M+S G LP TY GK+E A+
Sbjct: 401 -ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ + +S + Y +++ +CK K++ A + + C+G ++ T T++I LC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ EA+ M G P+ T+ L + G + KL M S
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L KA +++ LL D + VP+ + TF +L+ + + G ++ A ++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVI---TFNVLLDVFVKEGKLQEANELYKEM- 324
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D C Q R+ A+ + +P + + L+ G+
Sbjct: 325 ---ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--VRNKCSPDIVTFTSLIKGYC 379
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V D + + + K + N VTY LV+G+C+ ++ A L +EM G+ P+ +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G+ E+ + E + +V YT++++G CK G +E A + +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY K G + +A L RKM E G P+ TY+ L++ ++ L
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +EMK G D + M+I +L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 181/380 (47%), Gaps = 9/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L ++ + ++A ++ PD + T+ L+ Y +AG ++ A+ F
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVI---TYNSLLNGYCKAGSLKEALLLFGDLR 405
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + + IL+D C+ G ++ A K + ++Q P V Y IL+ G
Sbjct: 406 HAGLAPTVLT----YNILIDGYCRLGDLEEARRL--KEEMVEQGCLPDVCTYTILMKGSH 459
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ A F+ EM + + P+ Y T + L + +A RL + M EGI + +
Sbjct: 460 NACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTV 519
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +IDGL + G + + + + P +TYT L+ +C+ G L A K K M
Sbjct: 520 TYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDM 579
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
IS G PS TY F + + G + A +RKM+E G P+ +TY++L+ LC+ +
Sbjct: 580 ISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRT 639
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LA + EM RG + T T+LI C+ +++A + +M + G+ P YLT K L
Sbjct: 640 QLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKAL 699
Query: 361 NDEFKKRGMTALAQKLCNVM 380
F + M + L N +
Sbjct: 700 FKGFDEGHMNHAIEYLENAV 719
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 7/334 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T ++I AR G +E A E + + K S + L+ L +G VK A +
Sbjct: 276 THNVVITGLARKGDLEEAA---EMVEGMRLSKKASSFT--YNPLITGLLAKGFVKKADDL 330
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + ++ PTV YN +++G +S V+ A+ ++EMR + P+V+TY +L+ GY
Sbjct: 331 --QLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGY 388
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + A+ L ++R G+ P + YN +IDG G EE + E + P +
Sbjct: 389 CKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDV 448
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT L+KG A L A + M+S+G P YN R G + A L
Sbjct: 449 CTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREV 508
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G + D +TY+IL+ LCK L+ A + +M G D T T LIH C
Sbjct: 509 MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGL 568
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EA F+DMI GL P +T+ + +RG
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRG 602
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 134/341 (39%), Gaps = 71/341 (20%)
Query: 107 PTVRVYNILLNGWFR-SKNVKDAERF-WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P++ YN LL+ + + +N K A +E R PN VT+ ++ G R ++ A
Sbjct: 235 PSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAA 294
Query: 165 RLVK----------------------------------EMRKEGIEPNAIVYNTVIDGLV 190
+V+ EM EGI P + YN +I GL+
Sbjct: 295 EMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
++G+ E P ++TY SL+ GYCKAG L+ A + + G P+
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVL 414
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN + + G +E+A L +M+E G PD TY IL+K L +A + EM
Sbjct: 415 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM 474
Query: 311 KCRGCDIDL---------------------------------DTST--MLIHLLCRMYKF 335
+G D DT T +LI LC+
Sbjct: 475 LSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNL 534
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++A M+ GL P +T+ L +RG+ A+K
Sbjct: 535 NDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKF 575
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM V P+V ++ R D + EM + GIEP+ + YNT++D ++ G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251
Query: 194 RFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMM----------- 240
R ++V+ +++ G P VT+ ++ G + GDLE A+++++ M
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTY 311
Query: 241 -------ISRGF----------------LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+++GF +P+ TYN + G+VE A + +M
Sbjct: 312 NPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRA 371
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G PD +TY+ LL CK L A+ + +++ G + T +LI CR+ +E
Sbjct: 372 MGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEE 431
Query: 338 ASAEFEDMIRRGLVPHYLTFKRL 360
A E+M+ +G +P T+ L
Sbjct: 432 ARRLKEEMVEQGCLPDVCTYTIL 454
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
EM G+ P+ N V+ L +A R++++ + L P++VTY +L+ + K
Sbjct: 191 HEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKE 250
Query: 228 GDLEGASKILKMMISR--GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G + + +LK M +R G LP+ T+N ++ G +E+A + M S
Sbjct: 251 GRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA-SSF 309
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ L+ L + + A + EM+ G + T +IH L + + + A +F +M
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369
Query: 346 IRRGLVPHYLTFKRLNDEFKKRG 368
GL P +T+ L + + K G
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAG 392
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 169/368 (45%), Gaps = 23/368 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAA--IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
PD ++ TFV GM + + ++ + + ++ ++D LCK
Sbjct: 215 PDQITYGTFV--------DGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKD 266
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR + F + + D+ P + YN ++ G+ S A+R EM + ++PNVV
Sbjct: 267 GRHSDSHNLFIEMQ--DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ + + + A L EM GI PN I YN++IDG + R + M
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P + T+T+L+ GYC A ++ ++L M RG + + TYN F G +
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-----------CRG 314
A++L ++MI SG PD +T + LL LC KL A+++ K M+ G
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ D+ T +LI L KF EA +E+M RG+VP +T+ + D K+ A
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 375 KLCNVMSS 382
++ M S
Sbjct: 565 QMFVSMGS 572
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 163/364 (44%), Gaps = 48/364 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V + LL+G V +A L+
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKL--GLHPDVVTFTTLLHGLCLDHRVSEA----LD 172
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
+ + P+V+T+ TL+ G CR RV A+ L+ M + G++P+ I Y T +DG+ + G
Sbjct: 173 LFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EE+S + ++ C+ G P +VTY
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ G+C +G A ++L+ M+ R P+ TYN F K GK +A LY +M+
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY+ ++ CK+D+LD A + M +GC D+ T T LI C + D+
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSMELLDS 392
+M RRGLV + +T+ L F G A L M S + LLD
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472
Query: 393 RCKD 396
C +
Sbjct: 473 LCDN 476
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A+E + + L + P YN +++G+ + + AE +
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEM--LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 383
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +P+V T+ TL++GYC +R+D + L+ EM + G+ N + YNT+I G G
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+ ++ + P +VT +L+ G C G L+ A ++ K M
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T LI+ C+ + D+ F +M RRG+V + + L
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 364 FKKRG 368
F+K G
Sbjct: 624 FRKVG 628
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 13/297 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA + F+ + +P V + L++G+ +K + D E
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMAT--KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + N VTY TL+ G+C + ++ A+ L ++M G+ P+ + NT++DGL + G+
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 195 FEEVSGMMERFL-------VCEP----GPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++ M + P P ++TY L+ G G A ++ + M R
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TY+ K ++++A ++ M ++P+ +T++ L+ CK ++D
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ EM RG D LI+ ++ + A F++MI G+ P +T + +
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 655
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 13/287 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D C R+ E H+ + YN L++G+ ++ A +
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPR--RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-----------GIEPNAIVYN 183
M V P++VT TL++G C ++ A+ + K M+K G+EP+ + YN
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL+ G+F E + E P +TY+S++ G CK L+ A+++ M S+
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
F P+ T+N + K G+V+D + L+ +M G D + Y L+ K ++ A
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ + +EM G D T ++ + + A A ED+ R L
Sbjct: 634 LDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 50/325 (15%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE- 173
L +G + K ++DA + +M + P+V+ + L+ R+ R D I L ++M ++
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 174 ----------------------------------GIEPNAIVYNTVIDGLVEAGRFEEVS 199
G+ P+ + + T++ GL R E
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ + +C P ++T+T+L+ G C+ G + A +L M+ G P TY F
Sbjct: 172 DLFHQ--ICR--PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 260 SKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K G A+NL RKM E S P+ + Y ++ LCK+ + + + EM+ +G +
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ T +I C ++ A ++M+ R + P+ +T+ L + F K G A +L +
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 379 VMSSVPRSM--------ELLDSRCK 395
M +PR + ++D CK
Sbjct: 348 EM--LPRGIIPNTITYNSMIDGFCK 370
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K+F F L++ CK GRV E F + + +Y L+ G+ + N+
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR--RGIVADAIIYITLIYGFRKVGNI 630
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
A + EM V P+ +T ++ G+ ++RA+ +++++++ +E
Sbjct: 631 NGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 156/328 (47%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LCK G A E F + + P V Y ++NG + A +
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDM--VARGCQPDVYTYTTIINGLCKMGETAAAAGLIKK 221
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVTY TL++ C+ R V+ A+ + M+ +GI P + Y ++I GL R
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E S M+ P +VT++ L+ +CK G++ A +LK M G P+ TYN
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNS 341
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+S +V +A L+ MI G PD +Y IL+ C ++D A Q+ EM +G
Sbjct: 342 LMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG 401
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + T LIH C++ K EA F+DM G +P T+ L + F K+G A
Sbjct: 402 LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAF 461
Query: 375 KLCNVMSSV---PRSME---LLDSRCKD 396
+L M P + L+DS CK
Sbjct: 462 RLFRAMQGTYLKPNLVMYTILIDSMCKS 489
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 167/373 (44%), Gaps = 17/373 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
+I L KA EF A L D + PD T+ +I + G AA
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVY---TYTTIINGLCKMGETAAAAGLIKKMG 223
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E D+V + L+DSLCK V A + F K + +PTV Y L+
Sbjct: 224 EVGCQPDVVT--------YSTLIDSLCKDRLVNEALDIFSYMKA--KGISPTVVSYTSLI 273
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G K+A EM N+ P++VT+ L++ +C+ V A ++K M + G+E
Sbjct: 274 QGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE 333
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN I YN+++ G E + + + P + +Y+ L+ GYC ++ A ++
Sbjct: 334 PNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQL 393
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
MI +G P+ +Y F + GK+ +A L++ M +GY PD TY +LL+ CK
Sbjct: 394 FNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCK 453
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ L A ++ + M+ +L T+LI +C+ + A F ++ GL P
Sbjct: 454 QGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQI 513
Query: 357 FKRLNDEFKKRGM 369
+ + + K G+
Sbjct: 514 YTTIINGLCKEGL 526
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 162/343 (47%), Gaps = 8/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
TF LI +AG A+ F+ DMV + + +++ LCK G AA+
Sbjct: 163 TFTTLINGLCKAGEFAQALELFD-----DMVARGCQPDVYTYTTIINGLCKMGETAAAAG 217
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K E+ P V Y+ L++ + + V +A + M+ + ++P VV+Y +L++G
Sbjct: 218 LIKKMGEV--GCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C R A ++ EM I P+ + ++ +ID + G E G+++ P
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++TY SL+ GY ++ A K+ +MI+RG P +Y+ + ++++A L+
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+MI G TP+ ++Y L+ C+ KL A ++ K+M G DL T ++L+ C+
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+A F M L P+ + + L D K G A+KL
Sbjct: 456 YLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKL 498
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 163/360 (45%), Gaps = 13/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L K E +A L+ + ++G PD V T+ LI + +V A+ F +
Sbjct: 202 IINGLCKMGETAAAAGLIKKMGEVGCQ--PDVV---TYSTLIDSLCKDRLVNEALDIFSY 256
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
K + L+ LC R K AS ++ L+ P + +++L++
Sbjct: 257 MK----AKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN--IMPDIVTFSLLIDI 310
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + NV +A+ M + V PNV+TY +L+ GY V A +L M G +P+
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y+ +I+G R +E + + P V+YT+L+ +C+ G L A ++ K
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M + G+LP TY+ F K G + A L+R M + P+ + Y IL+ +CK
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L+ A ++ E+ G D+ T +I+ LC+ DEA F M G P+ ++
Sbjct: 491 NLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYN 550
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV-DRAIRLVKEMRKEGIEPNAIV 181
+N+ DA + M P ++ + L+ R+R+ D I L K+M G+ PN
Sbjct: 69 RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
N +I+ + ++ + + PT++T+T+L+ G CKAG+ A ++ M+
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+RG P TY K G+ A L +KM E G PD +TY L+ LCK+ ++
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + MK +G + + T LI LC ++ EASA +M ++P +TF L
Sbjct: 249 EALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLI 308
Query: 362 DEFKKRGMTALAQKLCNVMS 381
D F K G AQ + M+
Sbjct: 309 DIFCKEGNVLEAQGVLKTMT 328
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 36/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL ++ + + A K+ EL +P NIL+N + ++V +
Sbjct: 93 FNKLLSAIVRMRQYYDAVISLSKQMEL-AGLSPNTCTLNILINCFCLMQHVDLGFSVLAK 151
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K + P ++T+ TL+ G C+ +A+ L +M G +P+ Y T+I+GL + G
Sbjct: 152 VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGE 211
Query: 195 FEEVSGMMERF--LVCEP---------------------------------GPTMVTYTS 219
+G++++ + C+P PT+V+YTS
Sbjct: 212 TAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTS 271
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L++G C + AS +L M S +P T++ F K G V +A + + M E G
Sbjct: 272 LIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMG 331
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ +TY+ L+ + ++ A ++ M RGC D+ + ++LI+ C + + DEA
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAK 391
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F +MI +GL P+ +++ L F + G A++L
Sbjct: 392 QLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+D CK+G V A E+ P V YN L++G+ V +A + +
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEM--GVEPNVITYNSLMHGYSLQMEVVEARKLFDV 361
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+V +Y L+ GYC ++R+D A +L EM +G+ PN + Y T+I + G+
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421
Query: 195 FEEV-------------------SGMMERFLVCEPG------------------PTMVTY 217
E S ++E F C+ G P +V Y
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGF--CKQGYLGKAFRLFRAMQGTYLKPNLVMY 479
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T L+ CK+G+L A K+ + G P Y K G +++A+ +RKM E
Sbjct: 480 TILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEE 539
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G P+ +Y+++++ + A+Q+ EM+ +G D T+
Sbjct: 540 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTT 584
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 145/313 (46%), Gaps = 13/313 (4%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
D +S F + D+L A+ + RK L P + +N LL+ R + DA
Sbjct: 62 DDASSSFRNIDDAL-------ASFNHMLHRKPL-----PCIIQFNKLLSAIVRMRQYYDA 109
Query: 129 E-RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
+M ++PN T L+ +C ++ VD ++ ++ K G++P I + T+I+
Sbjct: 110 VISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLIN 169
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL +AG F + + + + P + TYT+++ G CK G+ A+ ++K M G P
Sbjct: 170 GLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQP 229
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TY+ K V +A++++ M G +P ++Y L++ LC + A +
Sbjct: 230 DVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAML 289
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EM D+ T ++LI + C+ EA + M G+ P+ +T+ L + +
Sbjct: 290 NEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQ 349
Query: 368 GMTALAQKLCNVM 380
A+KL +VM
Sbjct: 350 MEVVEARKLFDVM 362
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 2/304 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ LC +G++ A F K + + + P V Y L+NG + N A R
Sbjct: 183 TTFNTLIRGLCVEGKIGEALHLF--DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLL 240
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M ++N PNV+ Y T+++ C+ R+V A L EM +GI P+ YN++I L
Sbjct: 241 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 300
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
++ V+ ++ + + P +V ++++V CK G + A ++ MMI RG P TY
Sbjct: 301 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 360
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
++++A+ ++ M+ G P+ +Y+IL+ C+ ++D A+ + ++M
Sbjct: 361 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 420
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G D T LIH LC + + A A F +M+ G +P +T++ L D K A
Sbjct: 421 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 480
Query: 373 AQKL 376
A L
Sbjct: 481 AMVL 484
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LIR G + A+ F+ + + F + L++ LCK G AA
Sbjct: 184 TFNTLIRGLCVEGKIGEALHLFDKT----IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRL 239
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + ++ P V YN +++ + + V +A + EM + ++P++ TY +L+
Sbjct: 240 L--RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C L L+ EM I PN +V++TV+D L + G +++ + P +
Sbjct: 298 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 357
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT+L+ G+C +++ A K+ M+ +G +P+ +YN + + +++ AM L +
Sbjct: 358 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 417
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G D +TY+ L+ LC +L AI + EM G DL T +L+ LC+ +
Sbjct: 418 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 477
Query: 335 FDEA 338
EA
Sbjct: 478 LAEA 481
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 35/298 (11%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ L P+ + LL + K+ +M + P+V T L+ +C L
Sbjct: 101 NRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHL 160
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
RR+ A ++ ++ K G +P+ +NT+I GL G+ E + ++ + P +VTY
Sbjct: 161 RRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTY 220
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ G CK G+ A ++L+ M+ + P+ YN K +V +A NL+ +MI
Sbjct: 221 GTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMIT 280
Query: 278 SGYTPDRLTYHILLK-----------------------------------ILCKEDKLDL 302
G +PD TY+ L+ LCKE + +
Sbjct: 281 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 340
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A V M RG + D+ T T L+ C + DEA F+ M+ +G VP+ ++ L
Sbjct: 341 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 398
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 10/280 (3%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ DA + M + P+ V + L+ +++ + L +M GI P+
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I+ R ++ + L P T+ +L++G C G + A + I
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
GF P TY K G A+ L R M++ P+ + Y+ ++ LCK+ ++
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + EM +G D+ T LIH LC + ++ + +M+ ++P+ + F + D
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330
Query: 363 EFKKRGMTALAQKLCNVMSSVPRSME--------LLDSRC 394
K GM A+A + ++M + R +E L+D C
Sbjct: 331 ALCKEGMIAIAHDVVDMM--IKRGVEPDVVTYTALMDGHC 368
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 2/207 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F ++D+LCK+G + A + + + P V Y L++G + +A + +
Sbjct: 324 VFSTVVDALCKEGMIAIAHDVVDMM--IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + PNV +Y L+ GYC+++R+D+A+ L+++M +G+ + + YNT+I GL G
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + + + P +VTY L+ CK L A +LK + YN
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 501
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G++E A +L+ + G+
Sbjct: 502 IAIDGMCRAGELEAARDLFSNLSCQGF 528
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 41/177 (23%)
Query: 261 KFGKVEDAMNLYRKMIES-----------------------------------GYTPDRL 285
F ++DA++ + +M+ G PD
Sbjct: 89 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 148
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
T +IL+ C +L A V ++ GC D T LI LC K EA F+
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
I G P +T+ L + K G T+ A +L N +V ++DS CKD
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 265
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 9/343 (2%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F + TF L+ +AG V+ AI + + + +D + ++ LCK G VK
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVM----LQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E+ + + + +P YN L++ + V++A + + + P+V T+ +
Sbjct: 348 EAVEFLDQM--ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++G C R A+ L +EMR +G EP+ YN +ID L G+ +E M+++ +
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
+++TY +L+ G+CKA + A +I M G + TYN K +VEDA
Sbjct: 466 CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAS 525
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +MI G PD+ TY+ LL C+ + A + + M GC+ D+ T LI L
Sbjct: 526 QLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 330 CRMYKFDEASAEFEDMIRRG--LVPHYLTFKRLNDEFKKRGMT 370
C+ + + AS + +G L PH + F+KR T
Sbjct: 586 CKAGRVEVASKLLRSIQMKGIALTPHAYN-PVIQGLFRKRKTT 627
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 10/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK L +A + A +L D VPD + TF +++ Y G ++ A+ E
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPD---EKTFTTIMQGYIEEGDLDGALRIRE--- 248
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV+ S +++ +++ CK+GRV+ A + + D + P +N L+NG
Sbjct: 249 --QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD-GFFPDQYTFNTLVNGL 305
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ +VK A M +E P+V TY +++ G C+L V A+ + +M PN
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+I L + + EE + + P + T+ SL++G C + A ++ +
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S+G P TYN GK+++A+N+ ++M SG +TY+ L+ CK +K
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ A ++ EM+ G + T LI LC+ + ++AS + MI G P T+
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNS 545
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
L F + G A + M+S
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTS 568
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 157/314 (50%), Gaps = 6/314 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I + G V+ A+ EF + + + ++ + L+ +LCK+ +V+ A+E
Sbjct: 332 TYNSVISGLCKLGEVKEAV---EFLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P V +N L+ G ++N + A + EMR + P+ TY L++
Sbjct: 388 --ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C ++D A+ ++K+M G + I YNT+IDG +A + E + + V
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNS 505
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ G CK+ +E AS+++ MI G P TYN +F + G ++ A ++ +
Sbjct: 506 VTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M +G PD +TY L+ LCK ++++A ++ + ++ +G + +I L R K
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRK 625
Query: 335 FDEASAEFEDMIRR 348
EA F +M+ +
Sbjct: 626 TTEAINLFREMLEQ 639
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 161/330 (48%), Gaps = 9/330 (2%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S F +L+ +LC+ +++ A P + + ++ G+ ++ A R
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTIMQGYIEEGDLDGALRIR 247
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVE 191
+M + + + V+ +V G+C+ RV+ A+ ++EM ++G P+ +NT+++GL +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
AG + +M+ L P + TY S++ G CK G+++ A + L MI+R P+ T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN K +VE+A L R + G PD T++ L++ LC +A+++ +EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+GC+ D T MLI LC K DEA + M G +T+ L D F K
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487
Query: 372 LAQKLCNVMS--SVPRSM----ELLDSRCK 395
A+++ + M V R+ L+D CK
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 158/346 (45%), Gaps = 19/346 (5%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+++ + + G VE A+ + +N D F F L++ LCK G VK A E
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQD---GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
L + + P V YN +++G + VK+A F +M + +PN VTY TL+ C+
Sbjct: 321 M--LQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL-------VEAGRFEEVSGMMERFLVCEP 210
+V+ A L + + +GI P+ +N++I GL V FEE+ R CEP
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-----RSKGCEP 433
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
TY L+ C G L+ A +LK M G S TYN F K K+ +A
Sbjct: 434 DE--FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEE 491
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ +M G + + +TY+ L+ LCK +++ A Q+ +M G D T L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFC 551
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
R +A+ + M G P +T+ L K G +A KL
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 1/260 (0%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D P YN +LN N+K E +M + P+V T+ L++ CR ++
Sbjct: 147 DFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
AI ++++M G+ P+ + T++ G +E G + + E+ + + V+ +V
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 222 KGYCKAGDLEGASKILKMMISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
G+CK G +E A ++ M ++ GF P T+N K G V+ A+ + M++ GY
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD TY+ ++ LCK ++ A++ +M R C + T LI LC+ + +EA+
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 341 EFEDMIRRGLVPHYLTFKRL 360
+ +G++P TF L
Sbjct: 387 LARVLTSKGILPDVCTFNSL 406
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 38/342 (11%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LLDSL Q AA F+ + +++P +Y +L RS + D + +M+
Sbjct: 53 LLDSLRSQADDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN 111
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFE 196
+ L+E Y + D + +V M + G++P+ YN +++ LV+ +
Sbjct: 112 SGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLK 171
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKA----------------------------- 227
V + V P + T+ L+K C+A
Sbjct: 172 LVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIM 231
Query: 228 ------GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGY 280
GDL+GA +I + M+ G S + N F K G+VEDA+N ++M + G+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD+ T++ L+ LCK + AI++ M G D D+ T +I LC++ + EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ MI R P+ +T+ L K A +L V++S
Sbjct: 352 FLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K++ + A L+ I + PD K T+ L+ + R G ++ A
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPD---KFTYNSLLTHFCRGGDIKKAA------- 560
Query: 61 NLDMVKNFDSGASLFEI-----LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
D+V+ S +I L+ LCK GRV+ AS+ R + A T YN +
Sbjct: 561 --DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL--RSIQMKGIALTPHAYNPV 616
Query: 116 LNGWFRSKNVKDAERFWLEMRKEN-VTPNVVTYGTLVEGYCR-LRRVDRAIRLVKEMRKE 173
+ G FR + +A + EM ++N P+ V+Y + G C + A+ + E+ ++
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK 676
Query: 174 GIEPNAIVYNTVIDGLV 190
G P + +GL+
Sbjct: 677 GFVPEFSSLYMLAEGLL 693
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 164/339 (48%), Gaps = 7/339 (2%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F + T L+ +A +E + W FE M + LF +++ CK G+V+
Sbjct: 209 FPTVKTCTFLLSSLVKANELEKSYWVFE-----TMRQGVSPDVYLFSTAINAFCKGGKVE 263
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + F ++L S P V YN L++G + N+ +A RF +M K+ V ++TY
Sbjct: 264 DAIQLFFDMEKLGVS--PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 321
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ G +L + + A ++KE ++G PN +VYNT+IDG + G + + +
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P VT S+++G+CK G +E A IL+ M+SRGF +P + + + E A+
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
R+M+ P+ L+ LCKE K A+++ + +G +L T+ LIH L
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ EA + M+ RG V +T+ L K G
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEG 540
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 186/415 (44%), Gaps = 53/415 (12%)
Query: 1 MIKVLAKAKEFD-SAWCLLLDKIGGHEVPDFVSKDT--FVILIRRYARAGMVEAAIWTFE 57
++ L KA E + S W + G VS D F I + + G VE AI F
Sbjct: 218 LLSSLVKANELEKSYWVFETMRQG-------VSPDVYLFSTAINAFCKGGKVEDAIQLF- 269
Query: 58 FANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
DM K + L+ LCK G + A + K K + T+ Y++L+
Sbjct: 270 ----FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRF--KEKMVKDGVNATLITYSVLI 323
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG + + +A E ++ TPN V Y TL++GYC++ + A+R+ +M +GI
Sbjct: 324 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 383
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLV----CEPG--------------------- 211
PN++ N++I G + G+ E+ ++E L PG
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 443
Query: 212 ----------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
P T+LV G CK G A ++ ++ +GF + T N K
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G +++A+ L +KM+E G+ D++TY+ L+ CKE K++ ++ EM +G + D T
Sbjct: 504 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+LIH +CR+ K DEA + + R LVP+ T+ + D + K +KL
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 148/298 (49%), Gaps = 8/298 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVK 89
+ K T+ LI + G VE F +MVK + + +L+ +C+ G++
Sbjct: 524 LDKITYNTLISGCCKEGKVEEG-----FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 578
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A +++ K D P V Y ++++G+ ++ +++ E+ + E+ +N+ N V Y T
Sbjct: 579 EAVNLWNECKSRD--LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 636
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ YCR A +L +MR +GI P Y+++I G+ GR E+ +++
Sbjct: 637 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 696
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +V YT+L+ GYCK G ++ +L+ M S P+ TY +SK G ++ A
Sbjct: 697 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 756
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L +M+ G PD +TY++L CKE K++ ++ M G +D T T L+H
Sbjct: 757 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVH 814
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 142/273 (52%), Gaps = 8/273 (2%)
Query: 21 KIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
K+ G V + DTF +LI R G ++ A+ + + D+V N + + ++
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT----YGVM 602
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+D CK +++ + F + L Q+ VYN L+ + R+ N +A + +MR +
Sbjct: 603 IDGYCKADKIEEGEKLFTEL--LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK 660
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ P TY +L+ G C + R++ A L+ EMRKEG+ PN + Y +I G + G+ ++V
Sbjct: 661 GIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 720
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+++ + P +TYT ++ GY K+GD++ A+K+L M+ +G +P TYN
Sbjct: 721 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 780
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
F K GK+E+ + M + G D +TY L+
Sbjct: 781 FCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 2/316 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K F + L+ LCK G ++ A +K L++ + YN L++G + V
Sbjct: 485 KGFGANLVTTNALIHGLCKTGNMQEAVRLL--KKMLERGFVLDKITYNTLISGCCKEGKV 542
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
++ + EM K+ + P+ TY L+ G CR+ ++D A+ L E + + PN Y +
Sbjct: 543 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 602
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG +A + EE + L V Y +L++ YC+ G+ A K+ M S+G
Sbjct: 603 IDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 662
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P+ TY+ G++EDA L +M + G P+ + Y L+ CK ++D +
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 722
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
V +EM + T T++I + A+ +M+ +G+VP +T+ L + F
Sbjct: 723 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782
Query: 366 KRGMTALAQKLCNVMS 381
K G K+C+ MS
Sbjct: 783 KEGKIEEGFKICDYMS 798
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 140/287 (48%), Gaps = 4/287 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+ CK+G+V+ E F R E+ Q P YN+L++G R + +A W
Sbjct: 529 YNTLISGCCKEGKVE---EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 585
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E + ++ PNV TYG +++GYC+ +++ +L E+ + +E N++VYNT+I G
Sbjct: 586 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 645
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E + + PT TY+SL+ G C G +E A ++ M G LP+ Y
Sbjct: 646 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 705
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ K G+++ +N+ ++M P+++TY +++ K + A ++ EM +
Sbjct: 706 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T +L + C+ K +E + M + GL +T+ L
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTL 812
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 152/317 (47%), Gaps = 2/317 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+++N L L+ LCK+G+ A E + + L++ + + N L++G ++
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL--LEKGFGANLVTTNALIHGLCKTG 505
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N+++A R +M + + +TY TL+ G C+ +V+ +L EM K+GIEP+ YN
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 565
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I G+ G+ +E + + P + TY ++ GYCKA +E K+ ++++
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+ YN R + + G +A L+ M G P TY L+ +C +++ A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ EM+ G ++ T LI C++ + D+ ++M + P+ +T+ + D
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745
Query: 364 FKKRGMTALAQKLCNVM 380
+ K G A KL + M
Sbjct: 746 YSKSGDMKTAAKLLHEM 762
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 162/362 (44%), Gaps = 16/362 (4%)
Query: 29 DFVSKD------TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
D VSK T +I+ + + G +E A E + + F F ++ L
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM----LSRGFSINPGAFTTIIHWL 431
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C R ++A + R+ L ++ P + L+ G + DA W + ++
Sbjct: 432 CMNSRFESALRFL--REMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 489
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N+VT L+ G C+ + A+RL+K+M + G + I YNT+I G + G+ EE G
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE--GFK 547
Query: 203 ERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
R + + G P TY L+ G C+ G L+ A + SR +P+ TY +
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K K+E+ L+ +++ + + Y+ L++ C+ A ++ +M+ +G
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T + LIH +C + + ++A ++M + GL+P+ + + L + K G + M
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727
Query: 381 SS 382
SS
Sbjct: 728 SS 729
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 150 LVEGYC-RLRRVD--RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
L+ YC + R V AI + + + +G+ P ++ LV+A E+ + E +
Sbjct: 180 LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFET-M 238
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + +++ + +CK G +E A ++ M G P+ TYN K G ++
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A KM++ G +TY +L+ L K +K + A V KE +G + LI
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C+M +A DM+ +G+ P+ +T + F K G A+
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 406
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ CK G++ + D P Y ++++G+ +S ++K A + E
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYD--IHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + + P+ VTY L G+C+ +++ ++ M +EG+ + I Y T++ G
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + A CL+ + +P+ V + LI Y + G ++ + + +
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC---YTALIGGYCKLGQMDKVVNVLQEMS 728
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ D+ N + +++D K G +K A++ H+ + + P YN+L NG+
Sbjct: 729 SYDIHPN----KITYTVMIDGYSKSGDMKTAAKLLHEM--VGKGIVPDTVTYNVLTNGFC 782
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ +++ + M +E + + +TY TLV G+
Sbjct: 783 KEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 188/404 (46%), Gaps = 40/404 (9%)
Query: 31 VSKDTFVILIRRYARAGMVEAAI----------------WTFEF-------ANNLDMVKN 67
+ + TF+ILI YA+ + + A+ +T+ F N L +V+
Sbjct: 138 IRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEI 197
Query: 68 FDS---------GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+S + F IL+ +LC+ +++ A + +P + + L+ G
Sbjct: 198 VNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSY--GLSPDEKTFTTLMQG 255
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ N+ A R +M + VT LV GYC+ R++ + + EM EG P+
Sbjct: 256 FIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPD 315
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+N++++GL G + +++ L P + TY SL+ G CK G++E A +IL
Sbjct: 316 RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI R F P+ TYN K +VE+A L R + G PD T++ L++ LC +
Sbjct: 376 QMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN 435
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
LA+++ +EMK +GC D T MLI LC + +EA + ++M G + +T+
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYN 495
Query: 359 RLNDEFKKRGMTALAQKLCNVM--SSVPRSM----ELLDSRCKD 396
L D F K A+++ + M + R++ L+D CK+
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKN 539
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 163/324 (50%), Gaps = 6/324 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G VE A+ E N + ++++F + L+ +LCK+ +V+ A+E
Sbjct: 353 TYNSLIFGLCKLGEVEEAV---EILNQM-ILRDFSPNTVTYNTLISTLCKENQVEEATEL 408
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P V +N L+ G + N + A + EM+ + P+ TY L++
Sbjct: 409 --ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C R++ A+ L+KEM G N + YNT+IDG + R EE + + + +
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNV 526
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ G CK +E A++++ M+ G P TYN YF + G ++ A ++ +
Sbjct: 527 VTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M +G PD +TY L+ L K +++LA ++ + ++ +G + T +I L R +
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK 358
EA F +M+ +G P +T+K
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYK 670
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 187/384 (48%), Gaps = 13/384 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+IK L +A + A L+++++G + + PD + TF L++ + G + A+ E
Sbjct: 217 LIKALCRAHQIRPA-ILMMEEMGSYGLSPD---EKTFTTLMQGFIEEGNMNGALRIRE-- 270
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
MV S +L+ CK+GR++ + + ++ + P +N L+NG
Sbjct: 271 ---QMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMS--NEGFRPDRFTFNSLVNG 325
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R +VK A M +E P++ TY +L+ G C+L V+ A+ ++ +M PN
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT+I L + + EE + + P + T+ SL++G C + A ++ +
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M ++G P TYN G++E+A++L ++M SG + + +TY+ L+ CK
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNK 505
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+++ A ++ EM+ +G ++ T LI LC+ + +EA+ + M+ GL P T+
Sbjct: 506 RIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYN 565
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
L F + G A + M+S
Sbjct: 566 SLLTYFCRAGDIKKAADIVQTMTS 589
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 44/304 (14%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWL 133
+ +L+DSLC +GR++ A KE++ S V YN L++G+ ++K +++AE +
Sbjct: 459 YNMLIDSLCSRGRLEEALSLL---KEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++ NVVTY TL++G C+ RRV+ A +L+ +M EG++P+ YN+++ AG
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ + +++ P VTY +L+ G KAG +E AS++L+ + +G + +P TYN
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIES----------------------------------- 278
+ + + +A+ L+R+M+E
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTD 695
Query: 279 -GYTPDRLTYHILLKILCKEDKLDLAIQ-VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G+ PD ++ +L + LC D I+ V++ MK D+ +I ++ KF
Sbjct: 696 KGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFS---DSEVSMIMGFLKIRKFQ 752
Query: 337 EASA 340
+A A
Sbjct: 753 DALA 756
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 36/315 (11%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
++ P+ +Y +L + + R EM+ T+ L+E Y + D A
Sbjct: 100 NFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEA 159
Query: 164 IRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+ +V M +E G++ +A YN +++ LV+ + + V + R + P + T+ L+K
Sbjct: 160 VAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIK 219
Query: 223 GYCKA-----------------------------------GDLEGASKILKMMISRGFLP 247
C+A G++ GA +I + M++ G
Sbjct: 220 ALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPS 279
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
S T N + K G++E+ ++ +M G+ PDR T++ L+ LC+ + A+++
Sbjct: 280 SNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL 339
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M G D D+ T LI LC++ + +EA MI R P+ +T+ L K
Sbjct: 340 DVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKE 399
Query: 368 GMTALAQKLCNVMSS 382
A +L V++S
Sbjct: 400 NQVEEATELARVLTS 414
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 13/320 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++DSLCK GR A F + +E + P + YN ++ G+ S DAE+
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVTY L+ + + + A L EM GI PN I Y+++IDG +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P ++T+ +L+ GYC A ++ ++L M G + TTYN
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
F G + A++L ++MI SG PD +T LL LC KL A+++ K M+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 312 ---------CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G + D+ T +LI L KF EA +E+M RG+VP +T+ + D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K+ A ++ + M S
Sbjct: 555 GLCKQSRLDEATQMFDSMGS 574
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 148/326 (45%), Gaps = 38/326 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V +N LL+G V +A + +
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
M + PNVVT+ TL+ G CR R+ A+ L+ M ++G++P I Y T++DG+ + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGD 234
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EE+S ++ ++ C+ G P + TY
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
S++ G+C +G A ++L+ M+ R P TYN F K GK +A LY +M+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY ++ CK+++LD A + M +GC +L T LI C + D+
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEF 364
+M GLV T+ L F
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGF 440
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A E + + L + P Y+ +++G+ + + AE +
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +PN++T+ TL++GYC +R+D + L+ EM + G+ + YNT+I G G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+++ + P +VT +L+ G C G L+ A ++ K+M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T T LI+ C+ + D+ F +M RRG+V + +T+ L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 364 FKKRG 368
F+K G
Sbjct: 626 FRKVG 630
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 139/273 (50%), Gaps = 3/273 (1%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+ IL+ + + A + ++ K + P+VVT+ TL+ G C RV A+ L +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ PN + + T+++GL GR E +++R + PT +TY ++V G CK GD
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236
Query: 232 GASKILKMM--ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A +L+ M IS +P+ Y+ K G+ DA NL+ +M E G PD TY+
Sbjct: 237 SALDLLRKMEEISH-IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ C + A Q+ +EM R D+ T LI+ + KF EA +++M+ RG
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++P+ +T+ + D F K+ A+ + +M++
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC++GR+ A + E PT Y +++G + + A +
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMME--DGLQPTQITYGTIVDGMCKIGDTVSALDLLRK 244
Query: 135 MRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + ++ PNVV Y +++ C+ R A L EM+++GI P+ YN++I G +G
Sbjct: 245 MEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R+ + +++ L + P +VTY +L+ + K G A ++ M+ RG +P+ TY+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K +++ A +++ M G +P+ +T++ L+ C ++D +++ EM
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D T LIH + + A ++MI GL P +T L D G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 374 QKLCNVMSSVPRSME 388
++ VM + ++
Sbjct: 485 LEMFKVMQKSKKDLD 499
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 19/300 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA F+ + +P + +N L++G+ +K + D E
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + + TY TL+ G+ + ++ A+ L++EM G+ P+ + +T++DGL + G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 195 FEEVSGMMERFLVCEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ +E F V + P + TY L+ G G A ++ + M
Sbjct: 481 LKDA---LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG +P TY+ K ++++A ++ M ++P+ +T+ L+ CK ++
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D +++ EM RG + T LI ++ + A F++MI G+ P +T + +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ + +V + + + L+ G + AA +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD----TTTYNTLIHGFYLVGDLNAALDL 452
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
+ + P + + LL+G + +KDA + M+K V P+
Sbjct: 453 LQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V TY L+ G + A L +EM GI P+ I Y+++IDGL + R +E + M +
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+T+L+ GYCKAG ++ ++ M RG + + TY F K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L L +++L A+ + ++++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ + ++ ++ L++ +C ++ A+ ++ K G+ P+ + +NT++ GL
Sbjct: 101 LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R E + + P +VT+T+L+ G C+ G + A +L M+ G P+
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G A++L RKM E S P+ + Y ++ LCK+ + A + E
Sbjct: 221 TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ +G DL T +I C ++ +A ++M+ R + P +T+ L + F K G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 370 TALAQKLCNVMSSVPRSM--------ELLDSRCK 395
A++L + M +PR + ++D CK
Sbjct: 341 FFEAEELYDEM--LPRGIIPNTITYSSMIDGFCK 372
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L G+ + LE A + M+ LPS + + + + ++LY+KM
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
D ++ IL+K C KL A+ ++ G D+ T L+H LC + EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F M P+ +TF L + + G A L + M
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 155/314 (49%), Gaps = 6/314 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G ++ A+ N + N + F IL+D LCK+G VK A+
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLL----NEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ Q P V Y L++G+F K V A+ + + VTPNV +Y ++ G
Sbjct: 287 LSVM--IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGL 344
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + VD A++L KEM + + PN + Y+++IDGL ++GR +V +++ +
Sbjct: 345 CKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANI 404
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY SL+ G CK ++ A +L M G P +TY K G+++DA +Y+
Sbjct: 405 ITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQD 464
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ GY + Y +++ LCKE D A+ + +M+ GC D T LI L + K
Sbjct: 465 LLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNK 524
Query: 335 FDEASAEFEDMIRR 348
+A +MI R
Sbjct: 525 NGKAVKLLREMIAR 538
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 174/349 (49%), Gaps = 8/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T L+R G V+ A+ F +++ + K F + L++ LCK G
Sbjct: 121 PDTVTVNT---LLRGLCLNGKVKEAL---NFHDHV-IRKRFHLDQVSYGTLINGLCKSGE 173
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+AA + K + L P V +Y +++ + + K V DA + EM + + PNVVT+
Sbjct: 174 TRAALQLLRKIEGL-LLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ G+C + ++ A+ L+ EM + PN +N +IDGL + G ++ + ++ +
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK 292
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTYTSL+ GY ++ A + + RG P+ +Y+ K V++
Sbjct: 293 QGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDE 352
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ L+++M TP+ +TY L+ LCK ++ + E+ RG ++ T L++
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ ++ D+A A M G+ P T+ L D K G AQ++
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRI 461
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 2/313 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+VK F L+ C G++K A ++ + P V +NIL++G +
Sbjct: 221 IVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSL--NNVNPNVYTFNILIDGLCKEG 278
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
VK A M K+ V PNVVTY +L++GY ++ V++A + + G+ PN Y+
Sbjct: 279 EVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYS 338
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I+GL + +E + + + P VTY+SL+ G CK+G + ++ + +R
Sbjct: 339 VMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNR 398
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G + TYN K +V+ A+ L KM + G PD TY L+ LCK +L A
Sbjct: 399 GQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDA 458
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ +++ C+G +++ T++I+ LC+ FDEA + M G +P +T++ L
Sbjct: 459 QRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISA 518
Query: 364 FKKRGMTALAQKL 376
K A KL
Sbjct: 519 LFKNNKNGKAVKL 531
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 173/381 (45%), Gaps = 22/381 (5%)
Query: 30 FVSKDTFVILIRRYARAGM------VEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
+ + ++F++L RR + ++ A+ +F N++ + N F +L SL
Sbjct: 8 YATPNSFLLLNRRLHIQPLPSFIDNLDDAVSSF---NHILHMNNHTPPIFEFNKILSSLV 64
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K K A F ++ EL + P + +NIL+N + + A ++ K P+
Sbjct: 65 KMNHFKIAIS-FSQQMEL-KGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPD 122
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM- 202
VT TL+ G C +V A+ + ++ + + Y T+I+GL ++G ++
Sbjct: 123 TVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLR 182
Query: 203 --ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
E L+ P M YT+++ +CK + A + MI + P+ T+N F
Sbjct: 183 KIEGLLLVRPDVIM--YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFC 240
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
G++++A+ L +M + P+ T++IL+ LCKE ++ A V M +G + ++
Sbjct: 241 IVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVV 300
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T T L+ + + ++A F + RG+ P+ ++ + + K M A KL M
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360
Query: 381 ---SSVPRSM---ELLDSRCK 395
+ P ++ L+D CK
Sbjct: 361 HLKNMTPNTVTYSSLIDGLCK 381
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I YA+ GM++ A+ F N A + L+D+LCK GRV A F
Sbjct: 33 FNIFFSAYAKCGMIDKAMDIF----NKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKF 88
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ P + V++ L+ G + E + EM + PN+V + T++ C
Sbjct: 89 NQM--INEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLC 146
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV RLV + G+ P+ I YNT+IDG AG +E S ++E + P
Sbjct: 147 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSF 206
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+Y +L+ GYCKAG ++ A + + M+S G P TYN + + +A LY M
Sbjct: 207 SYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 266
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG TY+ +L LCK + +D A ++ + + +G +++ T T++I L + +
Sbjct: 267 INSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 326
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLVP +T++ + + + G
Sbjct: 327 EDAMDLFAAIPANGLVPDVVTYRVVAENLIEEG 359
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 155/308 (50%), Gaps = 2/308 (0%)
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NL + +F I + K G + A + F+K ++ +P Y L++
Sbjct: 19 NLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ--HGLSPDAVSYGALIDALC 76
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ V DAE + +M E VTPN+V + +LV G C + + ++ L EM GI PN +
Sbjct: 77 KLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIV 136
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT++ L + GR E +++ P +++Y +L+ G+C AG ++ ASK+L+ M
Sbjct: 137 FFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGM 196
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+S G P+ +YN + K G+++ A +L+RKM+ +G TP +TY+ +L L + +
Sbjct: 197 VSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRF 256
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A ++ M G + T +++ LC+ DEA F+ + +GL + +TF +
Sbjct: 257 SEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 316
Query: 361 NDEFKKRG 368
K G
Sbjct: 317 IGALLKGG 324
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+L+G+ + + M ++PN + Y + +D+A+ + +MR+ G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ P+A+ Y +ID L + GR ++ + + P +V ++SLV G C E
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++ M++ G P+ +N K G+V + L + G PD ++Y+ L+
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C +D A ++ + M G + + L+H C+ + D A + F M+ G+ P
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240
Query: 355 LTFKRL 360
+T+ +
Sbjct: 241 VTYNTI 246
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 37/291 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F +L +LCK+GRV + + P V YN L++G + + +A +
Sbjct: 137 FFNTILCNLCKEGRVMEGQRLVDSIECM--GVRPDVISYNTLIDGHCLAGTIDEASKLLE 194
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + PN +Y TL+ GYC+ R+D A L ++M GI P + YNT++ GL +
Sbjct: 195 GMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTK 254
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF-------- 245
RF E + + + TY +++ G CK+ ++ A K+ + + S+G
Sbjct: 255 RFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFT 314
Query: 246 ---------------------------LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+P TY + G +E+ +L+ M ++
Sbjct: 315 IMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKN 374
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
G P+ + L++ L + A ++ R ++ T++MLI +
Sbjct: 375 GTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 425
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++ GY G L +L +M++ G P+ +N FF ++K G ++ AM+++ KM + G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+PD ++Y L+ LCK ++D A +M G ++ + L++ LC + K+++
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN------VMSSVPRSMELLDSR 393
F +M+ G+ P+ + F + K G Q+L + V V L+D
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 394 C 394
C
Sbjct: 181 C 181
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ GY + L+ M GI PN ++N + G ++ + +
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P V+Y +L+ CK G ++ A MI+ G P+ ++ K E
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ G P+ + ++ +L LCKE ++ ++ ++C G D+ + LI
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C DEAS E M+ GL P+ ++ L + K G
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAG 219
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 11/255 (4%)
Query: 8 AKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
A D A LL + P+ S +T L+ Y +AG +++A F M+ N
Sbjct: 183 AGTIDEASKLLEGMVSVGLKPNSFSYNT---LLHGYCKAGRIDSAYSLFR-----KMLSN 234
Query: 68 -FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
G + +L L + R A E + W + YN +LNG +S V
Sbjct: 235 GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWG--IYTYNTILNGLCKSNCVD 292
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A + + + + + N++T+ ++ + R + A+ L + G+ P+ + Y V
Sbjct: 293 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVA 352
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ L+E G EE + P +LV+ GD+ A L + R F
Sbjct: 353 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 412
Query: 247 PSPTTYNYFFRYFSK 261
+T + FS
Sbjct: 413 VEASTTSMLISIFSS 427
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 167/335 (49%), Gaps = 8/335 (2%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
++ F L++ LC +GRV A E + E+ P + N L+NG S +
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK--PDLITINTLVNGLCLSGKEAE 309
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A +M + PN VTYG ++ C+ + A+ L+++M + I+ +A+ Y+ +ID
Sbjct: 310 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 369
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL + G + + + ++TY L+ G+C AG + +K+L+ MI R P
Sbjct: 370 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ T++ F K GK+ +A L+++MI G PD +TY L+ CKE+ LD A Q+
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M +GCD ++ T +LI+ C+ + D+ F M RG+V +T+ L F +
Sbjct: 490 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 549
Query: 368 GMTALAQKLCNVMSS--VPRSME----LLDSRCKD 396
G +A++L M S VP ++ LLD C +
Sbjct: 550 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 157/311 (50%), Gaps = 2/311 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N A + I++D LCK G + A F++ + + + YNIL+ G+ +
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM--KGITTNIITYNILIGGFCNAGRW 412
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
D + +M K + PNVVT+ L++ + + ++ A L KEM GI P+ I Y ++
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG + ++ + M++ + P + T+ L+ GYCKA ++ ++ + M RG
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 532
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ TYN + F + GK+ A L+++M+ P+ +TY ILL LC + + A++
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 592
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ ++++ ++D+ ++IH +C K D+A F + +G+ P T+ +
Sbjct: 593 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 652
Query: 366 KRGMTALAQKL 376
K+G + A+ L
Sbjct: 653 KKGPLSEAELL 663
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 149/272 (54%), Gaps = 2/272 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + +L+ +CK G+ A E K +E ++ Y+I+++G + ++ +A
Sbjct: 326 AVTYGPVLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIIDGLCKHGSLDNAFNL 383
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM + +T N++TY L+ G+C R D +L+++M K I PN + ++ +ID V+
Sbjct: 384 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 443
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E + + + P +TYTSL+ G+CK L+ A++++ +M+S+G P+ T
Sbjct: 444 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 503
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + K +++D + L+RKM G D +TY+ L++ C+ KL++A ++ +EM
Sbjct: 504 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 563
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
R ++ T +L+ LC + ++A FE
Sbjct: 564 SRKVPPNIVTYKILLDGLCDNGESEKALEIFE 595
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 2/291 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC G K A K ++ P Y +LN +S A +M +
Sbjct: 297 LVNGLCLSG--KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 354
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
N+ + V Y +++G C+ +D A L EM +GI N I YN +I G AGR+++
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ ++ + + P +VT++ L+ + K G L A ++ K MI RG P TY
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K ++ A + M+ G P+ T++IL+ CK +++D +++ ++M RG
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T LI C + K + A F++M+ R + P+ +T+K L D G
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV ++ L + ++K +M + + N+ T ++ +CR R++ A
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EPN I ++T+I+GL GR E +++R + P ++T +LV G C
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G A ++ M+ G P+ TY K G+ AM L RKM E D +
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK LD A + EM+ +G ++ T +LI C ++D+ + DMI
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRSM---ELLDSRCKD 396
+R + P+ +TF L D F K G A++L M P ++ L+D CK+
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 479
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 6/325 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++M K + + IL+ C GR ++
Sbjct: 364 YSIIIDGLCKHGSLDNA---FNLFNEMEM-KGITTNIITYNILIGGFCNAGRWDDGAKLL 419
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + P V +++L++ + + +++AE EM + P+ +TY +L++G+C
Sbjct: 420 --RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ +D+A ++V M +G +PN +N +I+G +A R ++ + + + V
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L++G+C+ G L A ++ + M+SR P+ TY G+ E A+ ++ K+
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y+I++ +C K+D A + + +G + T ++I LC+
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
EA F M G P T+ L
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNIL 682
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I A +D LL D I P+ V TF +LI + + G + A E +
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVV---TFSVLIDSFVKEGKLREA----EELH 454
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D CK+ + A++ + + P +R +NIL+NG+
Sbjct: 455 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM--VSKGCDPNIRTFNILINGYC 512
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + D + +M V + VTY TL++G+C L +++ A L +EM + PN +
Sbjct: 513 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 572
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G E+ + E+ + + Y ++ G C A ++ A + +
Sbjct: 573 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 632
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P TYN K G + +A L+RKM E G+ PD TY+IL++ +
Sbjct: 633 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 692
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
++++ +E+K G +D T M+I +L
Sbjct: 693 TKSVKLIEELKRCGFSVDASTIKMVIDML 721
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT++ ++ L K + + K M +G + T + F + K+ A
Sbjct: 182 PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 241
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+I+ GY P+ +T+ L+ LC E ++ A+++ M G DL T L++ L
Sbjct: 242 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 301
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C K EA + M+ G P+ +T+ + + K G TALA +L M
Sbjct: 302 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+ D AI L ++M P I ++ + + + +++ V + ++ + + T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ +C+ L A + +I G+ P+ T++ G+V +A+ L +M+E
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 279 GYTPD-----------------------------------RLTYHILLKILCKEDKLDLA 303
G+ PD +TY +L ++CK + LA
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+++ ++M+ R +D +++I LC+ D A F +M +G+ + +T+ L
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405
Query: 364 FKKRG 368
F G
Sbjct: 406 FCNAG 410
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 13/320 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++DSLCK GR A F + +E + P + YN ++ G+ S DAE+
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVTY L+ + + + A L EM GI PN I Y+++IDG +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P ++T+ +L+ GYC A ++ ++L M G + TTYN
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
F G + A++L ++MI SG PD +T LL LC KL A+++ K M+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 312 ---------CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G + D+ T +LI L KF EA +E+M RG+VP +T+ + D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K+ A ++ + M S
Sbjct: 555 GLCKQSRLDEATQMFDSMGS 574
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 148/326 (45%), Gaps = 38/326 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V +N LL+G V +A + +
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKL--GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
M + PNVVT+ TL+ G CR R+ A+ L+ M ++G++P I Y T++DG+ + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EEVS ++ ++ C+ G P + TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
S++ G+C +G A ++L+ M+ R P TYN F K GK +A LY +M+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY ++ CK+++LD A + M +GC +L T LI C + D+
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEF 364
+M GLV T+ L F
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGF 440
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A E + + L + P Y+ +++G+ + + AE +
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +PN++T+ TL++GYC +R+D + L+ EM + G+ + YNT+I G G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+++ + P +VT +L+ G C G L+ A ++ K+M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T T LI+ C+ + D+ F +M RRG+V + +T+ L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 364 FKKRG 368
F+K G
Sbjct: 626 FRKVG 630
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC++GR+ A + E PT Y +++G + + A +
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMME--DGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 135 MRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + ++ PNVV Y +++ C+ R A L EM+++GI P+ YN++I G +G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R+ + +++ L + P +VTY +L+ + K G A ++ M+ RG +P+ TY+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K +++ A +++ M G +P+ +T++ L+ C ++D +++ EM
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D T LIH + + A ++MI GL P +T L D G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 374 QKLCNVMSSVPRSME 388
++ VM + ++
Sbjct: 485 LEMFKVMQKSKKDLD 499
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 137/272 (50%), Gaps = 1/272 (0%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+ IL+ + + A + ++ K + P+VVT+ TL+ G C RV A+ L +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ PN + + T+++GL GR E +++R + PT +TY ++V G CK GD
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 232 GASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A +L KM +P+ Y+ K G+ DA NL+ +M E G PD TY+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C + A Q+ +EM R D+ T LI+ + KF EA +++M+ RG+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+P+ +T+ + D F K+ A+ + +M++
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 19/300 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA F+ + +P + +N L++G+ +K + D E
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + + TY TL+ G+ + ++ A+ L++EM G+ P+ + +T++DGL + G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 195 FEEVSGMMERFLVCEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ +E F V + P + TY L+ G G A ++ + M
Sbjct: 481 LKDA---LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG +P TY+ K ++++A ++ M ++P+ +T+ L+ CK ++
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D +++ EM RG + T LI ++ + A F++MI G+ P +T + +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ + +V + + + L+ G + AA +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD----TTTYNTLIHGFYLVGDLNAALDL 452
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
+ + P + + LL+G + +KDA + M+K V P+
Sbjct: 453 LQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V TY L+ G + A L +EM GI P+ I Y+++IDGL + R +E + M +
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+T+L+ GYCKAG ++ ++ M RG + + TY F K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L L +++L A+ + ++++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ + ++ ++ L++ +C ++ A+ ++ K G+ P+ + +NT++ GL
Sbjct: 101 LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R E + + P +VT+T+L+ G C+ G + A +L M+ G P+
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G A+NL RKM E S P+ + Y ++ LCK+ + A + E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ +G DL T +I C ++ +A ++M+ R + P +T+ L + F K G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 370 TALAQKLCNVMSSVPRSM--------ELLDSRCK 395
A++L + M +PR + ++D CK
Sbjct: 341 FFEAEELYDEM--LPRGIIPNTITYSSMIDGFCK 372
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L G+ + LE A + M+ LPS + + + + ++LY+KM
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
D ++ IL+K C KL A+ ++ G D+ T L+H LC + EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F M P+ +TF L + + G A L + M
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 13/320 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++DSLCK GR A F + +E + P + YN ++ G+ S DAE+
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVTY L+ + + + A L EM GI PN I Y+++IDG +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P ++T+ +L+ GYC A ++ ++L M G + TTYN
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
F G + A++L ++MI SG PD +T LL LC KL A+++ K M+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 312 ---------CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G + D+ T +LI L KF EA +E+M RG+VP +T+ + D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K+ A ++ + M S
Sbjct: 555 GLCKQSRLDEATQMFDSMGS 574
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 148/326 (45%), Gaps = 38/326 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V +N LL+G V +A + +
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
M + PNVVT+ TL+ G CR R+ A+ L+ M ++G++P I Y T++DG+ + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EEVS ++ ++ C+ G P + TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
S++ G+C +G A ++L+ M+ R P TYN F K GK +A LY +M+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY ++ CK+++LD A + M +GC +L T LI C + D+
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEF 364
+M GLV T+ L F
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGF 440
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A E + + L + P Y+ +++G+ + + AE +
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +PN++T+ TL++GYC +R+D + L+ EM + G+ + YNT+I G G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+++ + P +VT +L+ G C G L+ A ++ K+M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T T LI+ C+ + D+ F +M RRG+V + +T+ L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 364 FKKRG 368
F+K G
Sbjct: 626 FRKVG 630
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC++GR+ A + E PT Y +++G + + A +
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMME--DGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 135 MRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + ++ PNVV Y +++ C+ R A L EM+++GI P+ YN++I G +G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R+ + +++ L + P +VTY +L+ + K G A ++ M+ RG +P+ TY+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K +++ A +++ M G +P+ +T++ L+ C ++D +++ EM
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D T LIH + + A ++MI GL P +T L D G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 374 QKLCNVMSSVPRSME 388
++ VM + ++
Sbjct: 485 LEMFKVMQKSKKDLD 499
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 137/272 (50%), Gaps = 1/272 (0%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+ IL+ + + A + ++ K + P+VVT+ TL+ G C RV A+ L +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ PN + + T+++GL GR E +++R + PT +TY ++V G CK GD
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 232 GASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A +L KM +P+ Y+ K G+ DA NL+ +M E G PD TY+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C + A Q+ +EM R D+ T LI+ + KF EA +++M+ RG+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+P+ +T+ + D F K+ A+ + +M++
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 19/300 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA F+ + +P + +N L++G+ +K + D E
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + + TY TL+ G+ + ++ A+ L++EM G+ P+ + +T++DGL + G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 195 FEEVSGMMERFLVCEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ +E F V + P + TY L+ G G A ++ + M
Sbjct: 481 LKDA---LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG +P TY+ K ++++A ++ M ++P+ +T+ L+ CK ++
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D +++ EM RG + T LI ++ + A F++MI G+ P +T + +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ + +V + + + L+ G + AA +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD----TTTYNTLIHGFYLVGDLNAALDL 452
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
+ + P + + LL+G + +KDA + M+K V P+
Sbjct: 453 LQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V TY L+ G + A L +EM GI P+ I Y+++IDGL + R +E + M +
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+T+L+ GYCKAG ++ ++ M RG + + TY F K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L L +++L A+ + ++++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ + ++ ++ L++ +C ++ A+ ++ K G+ P+ + +NT++ GL
Sbjct: 101 LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R E + + P +VT+T+L+ G C+ G + A +L M+ G P+
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G A+NL RKM E S P+ + Y ++ LCK+ + A + E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ +G DL T +I C ++ +A ++M+ R + P +T+ L + F K G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 370 TALAQKLCNVMSSVPRSM--------ELLDSRCK 395
A++L + M +PR + ++D CK
Sbjct: 341 FFEAEELYDEM--LPRGIIPNTITYSSMIDGFCK 372
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L G+ + LE A + M+ LPS + + + + ++LY+KM
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
D ++ IL+K C KL A+ ++ G D+ T L+H LC + EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F M P+ +TF L + + G A L + M
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 155/320 (48%), Gaps = 13/320 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++DSLCK GR A F + +E + P + YN ++ G+ S DAE+
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVTY L+ + + + A L EM GI PN I Y+++IDG +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P ++T+ +L+ GYC A ++ ++L M G + TTYN
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
F G + A++L ++MI SG PD +T LL LC KL A+++ K M+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 312 ---------CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G + D+ T +LI L KF EA +E+M RG+VP +T+ + D
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K+ A ++ + M S
Sbjct: 555 GLCKQSRLDEATQMFDSMGS 574
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 147/326 (45%), Gaps = 38/326 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L P V + LL+G V +A + +
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFTTLLHGLCVEDRVSEALNLFHQ 174
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
M + PNVVT+ TL+ G CR R+ A+ L+ M ++G++P I Y T++DG+ + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 194 ---------RFEEVSGMMERFLV--------CEPG------------------PTMVTYT 218
+ EEVS ++ ++ C+ G P + TY
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
S++ G+C +G A ++L+ M+ R P TYN F K GK +A LY +M+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY ++ CK+++LD A + M +GC +L T LI C + D+
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEF 364
+M GLV T+ L F
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGF 440
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A E + + L + P Y+ +++G+ + + AE +
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +PN++T+ TL++GYC +R+D + L+ EM + G+ + YNT+I G G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+++ + P +VT +L+ G C G L+ A ++ K+M
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY ++ LCK+ +LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T T LI+ C+ + D+ F +M RRG+V + +T+ L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 364 FKKRG 368
F+K G
Sbjct: 626 FRKVG 630
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 138/272 (50%), Gaps = 1/272 (0%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+NIL+ + + A + ++ K + P+VVT+ TL+ G C RV A+ L +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ PN + + T+++GL GR E +++R + PT +TY ++V G CK GD
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 232 GASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A +L KM +P+ Y+ K G+ DA NL+ +M E G PD TY+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C + A Q+ +EM R D+ T LI+ + KF EA +++M+ RG+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+P+ +T+ + D F K+ A+ + +M++
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC++GR+ A + E PT Y +++G + + A +
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMME--DGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 135 MRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + ++ PNVV Y +++ C+ R A L EM+++GI P+ YN++I G +G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R+ + +++ L + P +VTY +L+ + K G A ++ M+ RG +P+ TY+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K +++ A +++ M G +P+ +T++ L+ C ++D +++ EM
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D T LIH + + A ++MI GL P +T L D G A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Query: 374 QKLCNVMSSVPRSME 388
++ VM + ++
Sbjct: 485 LEMFKVMQKSKKDLD 499
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 19/300 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA F+ + +P + +N L++G+ +K + D E
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + + TY TL+ G+ + ++ A+ L++EM G+ P+ + +T++DGL + G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 195 FEEVSGMMERFLVCEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ +E F V + P + TY L+ G G A ++ + M
Sbjct: 481 LKDA---LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG +P TY+ K ++++A ++ M ++P+ +T+ L+ CK ++
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D +++ EM RG + T LI ++ + A F++MI G+ P +T + +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ + +V + + + L+ G + AA +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD----TTTYNTLIHGFYLVGDLNAALDL 452
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
+ + P + + LL+G + +KDA + M+K V P+
Sbjct: 453 LQEM--ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V TY L+ G + A L +EM GI P+ I Y+++IDGL + R +E + M +
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+T+L+ GYCKAG ++ ++ M RG + + TY F K G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L L +++L A+ + ++++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ + ++ ++ L++ +C ++ A+ ++ K G+ P+ + + T++ GL
Sbjct: 101 LYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R E + + P +VT+T+L+ G C+ G + A +L M+ G P+
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G A+NL RKM E S P+ + Y ++ LCK+ + A + E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ +G DL T +I C ++ +A ++M+ R + P +T+ L + F K G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 370 TALAQKLCNVMSSVPRSM--------ELLDSRCK 395
A++L + M +PR + ++D CK
Sbjct: 341 FFEAEELYDEM--LPRGIIPNTITYSSMIDGFCK 372
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L G+ + LE A + M+ LPS + + + + ++LY+KM
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
D +++IL+K C KL A+ ++ G D+ T T L+H LC + EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F M P+ +TF L + + G A L + M
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ ++ V I R + + E +N + + ++DSLC+ G
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKME-------ERNVKADVFTYSTIIDSLCRDGC 243
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ AA F KE++ + +V YN L+ G ++ D +M + PNV+T
Sbjct: 244 IDAAISLF---KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A L KEM GI PN I YNT++DG R E + M++ +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +VT+TSL+KGYC ++ K+ + + RG + + TY+ + F + GK++
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L+++M+ G PD +TY ILL LC KL+ A+++ ++++ D+ + T +I
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++A F + +G+ P+ +T+ + K+G + A L
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 180/391 (46%), Gaps = 15/391 (3%)
Query: 12 DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
D A L + I +P V F I R + +V +F L++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV------LDFCKQLEL-NGIAHN 122
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
I+++ C+ + A K +L + P +N L+ G F V +A
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKL--GYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + P+VVTY ++V G CR A+ L+++M + ++ + Y+T+ID L
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + + ++VTY SLV+G CKAG + +LK M+SR +P+ T
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N F K GK+++A LY++MI G +P+ +TY+ L+ C +++L A + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
C D+ T T LI C + + D+ F ++ +RGLV + +T+ L F + G
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 372 LAQKLCNVMSS---VPRSME---LLDSRCKD 396
LA++L M S +P M LLD C +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L KA +++ LL D + VP+ + TF +L+ + + G ++ A ++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVI---TFNVLLDVFVKEGKLQEANELYKEM- 324
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D C Q R+ A+ + +P + + L+ G+
Sbjct: 325 ---ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--VRNKCSPDIVTFTSLIKGYC 379
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V D + + + K + N VTY LV+G+C+ ++ A L +EM G+ P+ +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G+ E+ + E + +V YT++++G CK G +E A + +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY K G + +A L RKM E G P+ TY+ L++ ++ L
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +EMK G D + M+I +L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 14/352 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I R G ++AAI F+ K S + L+ LCK G+ +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEME----TKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P V +N+LL+ + + +++A + EM ++PN++TY TL++GY
Sbjct: 286 L--KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEP 210
C R+ A ++ M + P+ + + ++I G R ++ + +R LV
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
VTY+ LV+G+C++G ++ A ++ + M+S G LP TY GK+E A+
Sbjct: 404 ----VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ + +S + Y +++ +CK K++ A + + C+G ++ T T++I LC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ EA+ M G P+ T+ L + G + KL M S
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ CK G + + KR ++ P V Y++L+NG + + DA + +LE
Sbjct: 263 FNTLINGYCKSGNLDQG--FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLE 320
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VT+ TL+ G+C R D + + ++M ++G++P+ I YNT+I+GL + G
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ P TYT L+ G CK GDLE A +I K M+ G +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G+V +A R+M+E+G PD TY +++ CK+ + ++ KEM+C G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T +L++ LC+ + A+ + M+ G+VP +T+ L
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 186/393 (47%), Gaps = 23/393 (5%)
Query: 13 SAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGA 72
S + +L+ G H+ S F +L+ Y +G AI F ++ F S
Sbjct: 140 SVFTSVLEARGTHQ-----SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCG 194
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
LF D L K A ++ + LD + P V +N+L++ + + +A+ +
Sbjct: 195 YLF----DRLMKLNLTSPAWAFY--EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
E+ K + P VV++ TL+ GYC+ +D+ RL + M + + P+ Y+ +I+GL +
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKE 308
Query: 193 GRFEEVSGMMERFL-VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ ++ + + FL +C+ G P VT+T+L+ G+C G + +I + M+ +G P
Sbjct: 309 GQLDDANKL---FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDV 365
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN K G + +A L +M + G PD+ TY +L+ CKE L+ A+++ KE
Sbjct: 366 ITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKE 425
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M G ++D T LI CR + EA +M+ G+ P T+ + F K+G
Sbjct: 426 MVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD 485
Query: 370 TALAQKLCNVM---SSVPRSME---LLDSRCKD 396
KL M VP + LL+ CK
Sbjct: 486 VKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 129/258 (50%), Gaps = 6/258 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G ++ A F + +V N F L++ C GR E
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN----DVTFTTLINGHCVTGRADLGMEI 352
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ ++ L + P V YN L+NG + ++++A++ +EM + + P+ TY L++G
Sbjct: 353 Y--QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++ A+ + KEM KEGIE + + + +I G G+ E + L P
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT ++ G+CK GD++ K+LK M G +P TYN K G++++A L
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530
Query: 275 MIESGYTPDRLTYHILLK 292
M+ G PD +TY+ILL+
Sbjct: 531 MLNLGVVPDDITYNILLE 548
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I YA+ GM++ A+ F + N + + L+D+LCK GRV A F
Sbjct: 312 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN----YGALIDALCKLGRVDDAEVKF 367
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ P + V+N L+ G + AE EM + + PN V + TL+ C
Sbjct: 368 NQM--INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 425
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV RL+ M G+ P+A Y +I G AGR +E + + + PT V
Sbjct: 426 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC A ++ A + + M+ +G P TYN + + +A LY M
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG D TY+I+L LCK + +D A ++ + + +G +++ T T++I L + +
Sbjct: 546 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 605
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLVP+ +T++ + + + G
Sbjct: 606 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 638
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 175/405 (43%), Gaps = 51/405 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ FD A + I P+ DT+ LI Y G + + E +
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPN---NDTYNCLIHGYLSIGKWKEVVQMLEKMS 269
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL--DQSWAPTVRVYNILLNG 118
+ + LL+ LC A SE H +L + +P ++NI +
Sbjct: 270 ----ARGLKPDCYTYGSLLNYLC------ALSE-MHSFLDLMVENGLSPDHHIFNIFFSA 318
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD----------------- 161
+ + + A + +MR+ ++PNVV YG L++ C+L RVD
Sbjct: 319 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 378
Query: 162 ------------------RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
RA LV EM +GI PNA+ +NT+I L GR E +++
Sbjct: 379 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID 438
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +YT L+ GYC AG + A K+ M+S G P+ TYN +
Sbjct: 439 LMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 498
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+++DA L+R+M+ G TP +TY+ +L L + + A ++ M G D+ T
Sbjct: 499 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 558
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++++ LC+ DEA F+ + +GL + +TF + K G
Sbjct: 559 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 603
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 165/352 (46%), Gaps = 11/352 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI R G ++ + TF L + + + LL LC RV A +
Sbjct: 100 TYSILIGCLCRMGRLKHSFATF----GLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN---VTPNVVTYGTLV 151
+R + P Y+ILL G+ ++A M ++ PNVVTY T++
Sbjct: 156 LLQRMP-ELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVI 214
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C+ + DRA + ++M G++PN YN +I G + G+++EV M+E+
Sbjct: 215 DGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK 274
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P TY SL+ C ++ L +M+ G P +N FF ++K G ++ AM++
Sbjct: 275 PDCYTYGSLLNYLCALSEMH---SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDI 331
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ KM + G +P+ + Y L+ LCK ++D A +M G ++ L++ LC
Sbjct: 332 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 391
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ K++ A +M+ +G+ P+ + F L G ++L ++M V
Sbjct: 392 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 156/393 (39%), Gaps = 39/393 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++K L K A +LL ++ PD VS + IL++ + E A+
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVS---YSILLKGFCNENRAEEALELLRMM 195
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N D ++ + ++D LCK A F + +D P YN L++G+
Sbjct: 196 AN-DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQM--IDNGVKPNNDTYNCLIHGY 252
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR-------------------- 159
K+ + +M + P+ TYG+L+ C L
Sbjct: 253 LSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIF 312
Query: 160 ------------VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+D+A+ + +MR+ G+ PN + Y +ID L + GR ++ + +
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 372
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +V + SLV G C E A +++ M+ +G P+ +N G+V +
Sbjct: 373 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 432
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L M G PD +Y L+ C + D A +V M G T L+H
Sbjct: 433 GRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 492
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C + D+A F +M+R+G+ P +T+ +
Sbjct: 493 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ C GR A + F + S PT YN LL+G+ + + DA + EM +
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLS--PTEVTYNTLLHGYCSASRIDDAYCLFREMLR 512
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ VTP VVTY T++ G + +R A L M G + + YN +++GL ++ +E
Sbjct: 513 KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDE 572
Query: 198 VSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
M + +C G + +T+T ++ K G E A + + + G +P+ TY
Sbjct: 573 AFKMFQS--LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLV 630
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ G +E+ +L+ M ++G P+ + L++ L + A ++ R
Sbjct: 631 AENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 690
Query: 316 DIDLDTSTMLIHLL 329
++ T+++LI +
Sbjct: 691 SVEASTTSLLISIF 704
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 13/266 (4%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF-EEV 198
V PN TY L+ CR+ R+ + + K G N IV N ++ GL + R E +
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS---RGFLPSPTTYNYF 255
+++R P V+Y+ L+KG+C E A ++L+MM + R P+ TY
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K + A ++++MI++G P+ TY+ L+ K +Q+ ++M RG
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D T L++ LC + E + + M+ GL P + F + K GM A
Sbjct: 274 KPDCYTYGSLLNYLCAL---SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330
Query: 376 LCNVM------SSVPRSMELLDSRCK 395
+ N M +V L+D+ CK
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCK 356
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 8/228 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ L+ Y A ++ A F +M+ K G + +L L + R A E
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFR-----EMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 540
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ ++ + YNI+LNG +S V +A + + + + + N++T+ ++
Sbjct: 541 LY--LNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 598
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+ R + A+ L + G+ PN + Y V + L+E G EE + P
Sbjct: 599 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 658
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+LV+ GD+ A L + R F +T + F+
Sbjct: 659 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTS 706
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 9/355 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V TF L++ RA V A+ E ++ + + + F L+ ++G
Sbjct: 183 PDVV---TFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPD----ETTFTTLMQGFVEEGS 235
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+KAA K + L+ +PT N+L+NG+ + V+DA + + P+ +TY
Sbjct: 236 IKAALRV--KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T V G C+ V A++++ M +EG +P+ YN V++ L + G+ EE G++ + +
Sbjct: 294 NTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVE 353
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + T+ +L+ C LE A + + + +G P T+N K G +
Sbjct: 354 RGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQL 413
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ L+ +M SG TPD +TY+ L+ LC KL A+ + KEM+ GC T +I
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID 473
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LC+ + +EA F+ M +G+ + +TF L D K A +L + M S
Sbjct: 474 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS 528
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 136/272 (50%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
VYN LLN +K E + EM + + P+VVT+ TL++ CR +V A+ +++EM
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ P+ + T++ G VE G + + R L PT VT L+ GYCK G +
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++ I+ GF P TYN F + G V A+ + M++ G+ PD TY+I+
Sbjct: 272 EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK +L+ A + +M RGC D+ T LI LC + +EA + +GL
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGL 391
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
P TF L + K G LA +L M S
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKS 423
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 147/286 (51%), Gaps = 2/286 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ +LC R++ A + R+ + +P V +NIL+N + + + A R +
Sbjct: 361 TTFNTLIVALCSGNRLEEALDL--ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLF 418
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM+ TP+ VTY TL++ C L ++ +A+ L+KEM G + + YNT+IDGL +
Sbjct: 419 EEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKK 478
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R EE + ++ + +T+ +L+ G CK ++ A++++ MIS G P+ TY
Sbjct: 479 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITY 538
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++ K G ++ A ++ + M +G+ D +TY L+ LCK + +A+++ + M+
Sbjct: 539 NSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRI 598
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+G +I L R +A F +M G P T+K
Sbjct: 599 KGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYK 644
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 181/382 (47%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A + +A +L + PD + TF L++ + G ++AA+ A
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPD---ETTFTTLMQGFVEEGSIKAALRVK--AR 245
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L+M +L++ CK GRV+ A Y ++E+ + P YN +NG
Sbjct: 246 MLEM--GCSPTKVTVNVLINGYCKLGRVEDALGYI--QQEIANGFEPDQITYNTFVNGLC 301
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +V A + M +E P+V TY +V C+ +++ A ++ +M + G P+
Sbjct: 302 QNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDIT 361
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I L R EE + + + P + T+ L+ CK GD + A ++ + M
Sbjct: 362 TFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM 421
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G P TYN GK+ A++L ++M +G +TY+ ++ LCK+ ++
Sbjct: 422 KSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRI 481
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A +V +M +G + T LI LC+ + D+A+ MI GL P+ +T+ +
Sbjct: 482 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSI 541
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ K+G A + M++
Sbjct: 542 LTHYCKQGDIKKAADILQTMTA 563
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + + A +L + +PD TF LI +E A+ + A
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDIT---TFNTLIVALCSGNRLEEAL---DLAR 384
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + K F IL+++LCK G + A F + K P YN L++
Sbjct: 385 QVTL-KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS--SGCTPDEVTYNTLIDNLC 441
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ A EM + VTY T+++G C+ R++ A + +M +GI NAI
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL + R ++ + ++ + + P +TY S++ YCK GD++ A+ IL+ M
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K G+ + A+ L R M G Y+ +++ L + +
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNT 621
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M+ +G +P + +F+
Sbjct: 622 RDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRM 681
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 682 LAEGLLNLGM 691
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 146/305 (47%), Gaps = 11/305 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQG 86
PD ++ +TFV + G V A+ + MV+ D + I+++ LCK G
Sbjct: 288 PDQITYNTFV---NGLCQNGHVGHALKVMDV-----MVQEGHDPDVFTYNIVVNCLCKNG 339
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+++ A ++ E + P + +N L+ +++A ++ + ++P+V T
Sbjct: 340 QLEEAKGILNQMVE--RGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYT 397
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ C++ A+RL +EM+ G P+ + YNT+ID L G+ + +++
Sbjct: 398 FNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEME 457
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ VTY +++ G CK +E A ++ M +G + T+N K +++
Sbjct: 458 SAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRID 517
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
DA L +MI G P+ +TY+ +L CK+ + A + + M G ++D+ T LI
Sbjct: 518 DANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLI 577
Query: 327 HLLCR 331
+ LC+
Sbjct: 578 NGLCK 582
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 113/281 (40%), Gaps = 38/281 (13%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWL-EMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ +AP VY ++ + D + + EMR+E V + +E Y R +
Sbjct: 71 EDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFV 130
Query: 162 RAIRLVKEMRKE--GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A+ LV GI+ + +VYN +++ LVE + + ++E
Sbjct: 131 DAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMK----LLETV-------------- 172
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
Y + G+ RG P T+N + + +V A+ + +M SG
Sbjct: 173 ----YSEMGE-------------RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD T+ L++ +E + A++V M GC T +LI+ C++ + ++A
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ I G P +T+ + + G A K+ +VM
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 170/349 (48%), Gaps = 19/349 (5%)
Query: 35 TFVILIRRYARAGMVE------AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
+F L+ R G VE AA+W + F + D+ +++ SLC++GR
Sbjct: 183 SFRALVVVCCREGKVEEVDALLAAMWRYGF--------SLDNATC--TVVVRSLCEKGRF 232
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
K SE+F R+ L+ P V Y ++G + + VK A EM + PNV T+
Sbjct: 233 KDVSEFF--RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 290
Query: 149 TLVEGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++G C++ +RA RL +K ++ +PN Y +I G G+ ++ R +
Sbjct: 291 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 350
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P TYT+L+ G+CK G + A +++ M GFLP+ TYN F K GK+++
Sbjct: 351 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 410
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A + R G D++TY IL+ CK+ + A+ + M GC D++ T LI
Sbjct: 411 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 470
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ + +E+ F+ + GL+P T+ + + K G + LA ++
Sbjct: 471 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 519
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 162/374 (43%), Gaps = 47/374 (12%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I L K + A+ +L + +G P+ + T LI + G E A F
Sbjct: 258 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT---LIDGLCKIGWTERAFRLF----- 309
Query: 62 LDMVKN--FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L ++K+ + + +++ C++G++ A +E R ++Q P Y L+ G
Sbjct: 310 LKLIKSSSYKPNVHTYTVMIGGYCREGKL-ARAEMLLVRM-VEQGLKPNTNTYTTLIGGH 367
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + A +M++E PN+ TY +++G+C+ ++ A ++++ +G++ +
Sbjct: 368 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 427
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y +I + G + +R + P + YTSL+ YC+ +E + K
Sbjct: 428 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 487
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ G LP+ TY + K G+ A+ ++ +M+++G D +TY L+ LCKE +
Sbjct: 488 CLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESR 547
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L +EA A +E M+ + LVP +T
Sbjct: 548 L-----------------------------------EEAKALYEGMLDKRLVPCEVTRVT 572
Query: 360 LNDEFKKRGMTALA 373
L E+ +R T++A
Sbjct: 573 LTFEYCRREKTSIA 586
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V N +L + + A + + M + V P+ ++ LV CR +V+ L+
Sbjct: 146 VETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLA 205
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
M + G + V+ L E GRF++VS R L P +V YT+ + G CK
Sbjct: 206 AMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRR 265
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTY 287
++ A +L+ M+ RG P+ T+ K G E A L+ K+I+ S Y P+ TY
Sbjct: 266 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTY 325
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+++ C+E KL A + M +G + +T T LI C+ FD A M +
Sbjct: 326 TVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQ 385
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G +P+ T+ + D F K+G A K+ + +S
Sbjct: 386 EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 14/276 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG----ASLFEILLDSLCKQGRVKA 90
T+ ++I Y R G + A + +V+ + G + + L+ CK G
Sbjct: 324 TYTVMIGGYCREGKLARA--------EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 375
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E +K K+ + + P + YN +++G+ + +++A + + + + +TY L
Sbjct: 376 AFELMNKMKQ--EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 433
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ +C+ + A+ L M + G P+ Y ++I + + EE ++ L+
Sbjct: 434 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 493
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT TYTS++ GYCK G A ++ + M+ G TY K ++E+A
Sbjct: 494 LPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKA 553
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
LY M++ P +T L C+ +K +A+ V
Sbjct: 554 LYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSV 589
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 46/311 (14%)
Query: 75 FEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
F L+ C++G+V+ + + LD + TV V ++ G F KD
Sbjct: 184 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC-TVVVRSLCEKGRF-----KDVSE 237
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ M + PNVV Y ++G C+ R V +A +++EM G++PN VY
Sbjct: 238 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN--VY-------- 287
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-LKMMISRGFLPSP 249
T+T+L+ G CK G E A ++ LK++ S + P+
Sbjct: 288 -------------------------THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNV 322
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY + + GK+ A L +M+E G P+ TY L+ CK D A ++ +
Sbjct: 323 HTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 382
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
MK G ++ T +I C+ K EA +GL +T+ L E K+G
Sbjct: 383 MKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH 442
Query: 370 TALAQKLCNVM 380
A L + M
Sbjct: 443 ITYALDLFDRM 453
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 86/230 (37%), Gaps = 41/230 (17%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF---EEVSGMMERFL 206
+V + R+ A +V EMR G+ N V+ +E G F +V M R
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
VC P ++ +LV C+ G +E +L M GF T R + G+ +
Sbjct: 177 VC---PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFK 233
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D +R+M+E+G P+ + Y + LCK + A V
Sbjct: 234 DVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHV-------------------- 273
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
E+M+ RGL P+ T L D K G T A +L
Sbjct: 274 ---------------LEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 308
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+V + +AG L A+ ++ M S G T N+ R + G A ++ M +
Sbjct: 116 GMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRA 175
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD ++ L+ + C+E K++ + M G +D T T+++ LC +F +
Sbjct: 176 GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 235
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
S F M+ G P+ + + D KR
Sbjct: 236 SEFFRRMLETGTPPNVVNYTAWIDGLCKR 264
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 171/385 (44%), Gaps = 46/385 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD S F LI+ G + A+ F+ M+ + F ++ L++ LCK G
Sbjct: 142 PDTAS---FTTLIKGLCLEGQIGEALHLFD-----KMIWEGFQPDVVIYATLINGLCKTG 193
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
AA ++ + P V VY L++ + + A + EM + ++PN+VT
Sbjct: 194 HTSAAIRLLRSMEK--GNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+LV C L L+ EM I PNAI TV+D L + G + +++
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG---------------------- 244
P +VTYT+L+ G+C +++ A K+ MM+ +G
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371
Query: 245 -------------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
+P+ TYN G+++DA+ L+R+M+ G PD +TY ILL
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LCK LD A+ + K ++ D D+ T++I +CR + ++A F ++ +GL
Sbjct: 432 DYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK 491
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKL 376
P+ T+ + KRG+ A KL
Sbjct: 492 PNVWTYNIMTHGLCKRGLLDEATKL 516
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 158/351 (45%), Gaps = 13/351 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF--EF 58
+I L K ++ A+ L + I P+ V+ ++ V YA + E W
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV-----YALCNLGE---WKHVNTL 271
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
N + K + SL ++ D+LCK+G V A + P V Y L++G
Sbjct: 272 LNEMVDSKIMPNAISLTTVV-DALCKEGMVAQAHDVVDMM--FQSGVEPDVVTYTALIDG 328
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +A + + M + PNV +Y TL+ GYC++ R+D+A+ L +EM ++ + PN
Sbjct: 329 HCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPN 388
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT+I GL GR ++ + + C P +VTY L+ CK L+ A +LK
Sbjct: 389 TVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLK 448
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ P Y + G++EDA +L+ + G P+ TY+I+ LCK
Sbjct: 449 AIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRG 508
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
LD A ++ EM C D T + R + A E+M+ RG
Sbjct: 509 LLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 168/357 (47%), Gaps = 22/357 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L E+ LL + + +P+ +S T V + GMV A +
Sbjct: 255 LVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV---DALCKEGMVAQA------HD 305
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+DM+ F SG + L+D C + + A + F + + AP V YN L+
Sbjct: 306 VVDMM--FQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM--VHKGCAPNVFSYNTLI 361
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+ + + + A + EM ++ + PN VTY TL+ G C + R+ AI L +EM G
Sbjct: 362 NGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI 421
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ + Y ++D L + ++ +++ P + YT ++ G C+AG+LE A +
Sbjct: 422 PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDL 481
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ S+G P+ TYN K G +++A L+ +M E+ + D TY+ + + +
Sbjct: 482 FSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLR 541
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
++ AIQ+ +EM RG D+ T+T+L+ +L + + EDM PH
Sbjct: 542 NNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMF-----PH 593
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 12/335 (3%)
Query: 26 EVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
+ DF T + ++RY+ + + +F +N+ +L++S C
Sbjct: 73 SIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNV----------YTLNVLINSFCHL 122
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
RV A K +L P + L+ G + +A + +M E P+VV
Sbjct: 123 NRVNFAFSVLAKILKL--GCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVV 180
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y TL+ G C+ AIRL++ M K +P+ +VY T+I L + + + +
Sbjct: 181 IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEM 240
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +VT SLV C G+ + + +L M+ +P+ + K G V
Sbjct: 241 ITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMV 300
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A ++ M +SG PD +TY L+ C ++D A++V M +GC ++ + L
Sbjct: 301 AQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTL 360
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
I+ C++ + D+A FE+M R+ L+P+ +T+ L
Sbjct: 361 INGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL 395
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 2/299 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ +LC G K + ++ +D P +++ + V A M +
Sbjct: 255 LVYALCNLGEWKHVNTLLNEM--VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQ 312
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
V P+VVTY L++G+C +D A+++ M +G PN YNT+I+G + R ++
Sbjct: 313 SGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDK 372
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E + P VTY +L+ G C G L+ A + + M++ G +P TY
Sbjct: 373 AMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLD 432
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
Y K ++ AM L + + S PD Y I++ +C+ +L+ A + + +G
Sbjct: 433 YLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKP 492
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ T ++ H LC+ DEA+ F +M T+ + F + T+ A +L
Sbjct: 493 NVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQL 551
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 11/291 (3%)
Query: 115 LLNGWFRSK-----NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
LL+ FRSK + DA + M + P++V + ++ +++R + L ++
Sbjct: 40 LLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRK 99
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M GI N N +I+ R ++ + L P ++T+L+KG C G
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A + MI GF P Y K G A+ L R M + PD + Y
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ LCK+ + A + EM +G ++ T L++ LC + ++ + +M+
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRC 394
++P+ ++ + D K GM A A + ++M V L+D C
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHC 330
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 88/235 (37%), Gaps = 41/235 (17%)
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
R L P P++V + ++ K + + M S G + T N F
Sbjct: 63 NRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHL 122
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL---------------------- 300
+V A ++ K+++ G PD ++ L+K LC E ++
Sbjct: 123 NRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIY 182
Query: 301 -------------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
AI++ + M+ C D+ LIH LC+ + +A F +MI
Sbjct: 183 ATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMIT 242
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSMEL---LDSRCKD 396
+G+ P+ +T L G L N M +P ++ L +D+ CK+
Sbjct: 243 KGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKE 297
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 15/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K ++F++ LL+++ E+ ++ +TF + + +A A + A+ E
Sbjct: 215 MMTILGKTRQFETM-VSLLEEMAEKEL---LTMETFTVCFKAFAAAKERKKAVGVLELMK 270
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ G LLDSL GR K E ++L + P ++ Y +LLNGW
Sbjct: 271 KY----KYKVGVETINCLLDSL---GRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWC 323
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R +N+ +A + W +M E+ P++V + T++EG R ++ AI+L + M+ +G P+
Sbjct: 324 RVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVK 383
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ + + +E E P YT L+ G+ ++ +LK M
Sbjct: 384 SYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM 443
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN + + +DA+ +Y+KMIE+G P TY +++K +
Sbjct: 444 KANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNY 503
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ + EMK +GC D ++ T+ I L + + EA E+MI +G+ L + +
Sbjct: 504 EMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKF 563
Query: 361 NDEFKKRG----MTALAQKL 376
+F + G + LAQK+
Sbjct: 564 AADFSRAGRPDILEELAQKM 583
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 35/216 (16%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+K G ++ YNT++ L + +FE + ++E E TM T+T K + A +
Sbjct: 201 QKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKEL-LTMETFTVCFKAFAAAKER 259
Query: 231 EGASKILKMM------------------ISRG----------------FLPSPTTYNYFF 256
+ A +L++M + R F P+ TY
Sbjct: 260 KKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLL 319
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ + + +A ++ +MI+ + PD + ++ +L+ L + K AI++ + MK +G
Sbjct: 320 NGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPS 379
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D+ + T+L+ C+ K EA FE+M G P
Sbjct: 380 PDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRP 415
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 204/442 (46%), Gaps = 62/442 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KAK D A L++ + P+ + F+ +G +EA+ EFA+
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI--------SGYIEAS----EFAS 540
Query: 61 NLDMVKNFDS-----GASLFEILLDSLCKQGRV-KAASEYFHKRKELDQSWAPTVRVYNI 114
VK L L++ CK+ +V +A S Y R +DQ + Y +
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAY---RSMVDQGILGDAKTYTV 597
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+NG F++ V DAE + EMR + + P+V +YG L+ G+ +L + +A + EM +EG
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ PN I+YN ++ G +G E+ +++ V P VTY +++ GYCK+GDL A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 235 KILKMMISRGFLP----------------------------------SPTTYNYFFRYFS 260
++ M +G +P S +N +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 261 KFGKVEDAMNLYRKMIESGY----TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
KFGK E + ++++ + P+ +TY+I++ LCKE L+ A ++ +M+
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T T L++ +M + E F++ I G+ P ++ + + + F K GMT A L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 377 CNVM---SSVPRSMELLDSRCK 395
+ M ++V +L S C+
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCR 919
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 156/310 (50%), Gaps = 2/310 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L++ C++ V+ E + K+ + +P Y ++ G S ++ A
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNI 439
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM PNVV Y TL++ + + R A+R++KEM+++GI P+ YN++I GL +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A R +E + + P TY + + GY +A + A K +K M G LP+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K KV +A + YR M++ G D TY +L+ L K DK+D A ++ +EM+
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ + +LI+ ++ +AS+ F++M+ GL P+ + + L F + G
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 372 LAQKLCNVMS 381
A++L + MS
Sbjct: 680 KAKELLDEMS 689
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 10/328 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++ +C G + A ++ KE+ S P V +Y L+ + ++ DA R
Sbjct: 420 YGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM+++ + P++ Y +L+ G + +R+D A + EM + G++PNA Y I G +EA
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F ++ C P V T L+ YCK + A + M+ +G L TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K KV+DA ++R+M G PD +Y +L+ K + A + EM
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ ML+ CR + ++A ++M +GL P+ +T+ + D + K G A A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 374 QKLCNVM---SSVPRSM---ELLDSRCK 395
+L + M VP S L+D C+
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 53/336 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ K G ++ AS F + E + P V +YN+LL G+ RS ++ A+ E
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PN VTY T+++GYC+ + A RL EM+ +G+ P++ VY T++DG
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 195 FEE------------------------------------------VSGMMERFLVCEPGP 212
E + G +RF P
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF----GKP 803
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VTY ++ CK G+LE A ++ M + +P+ TY + K G+ + ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-----GCDIDLDTSTMLIH 327
+ I +G PD + Y +++ KE A+ + +M + GC + + T L+
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ + + A E+M+R +P T L +E
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 6/299 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ P Y++L++G + K ++DA+ +EM V+ + TY L++G + R D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A LV EM GI +Y+ I + + G E+ + + + P Y SL++
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
GYC+ ++ ++L M R + SP TY + G ++ A N+ ++MI SG P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ + Y L+K + + A++V KEMK +G D+ LI L + + DEA +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCK 395
+M+ GL P+ T+ + + A A K C V+ + L++ CK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 140/370 (37%), Gaps = 89/370 (24%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A + + G PD S + +LI +++ G ++ A F+ +M
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFS---YGVLINGFSKLGNMQKASSIFD-----EM 653
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
V+ ++ +LL C+ G ++ A E + + P Y +++G+ +S
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV--KGLHPNAVTYCTIIDGYCKSG 711
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV---------------- 167
++ +A R + EM+ + + P+ Y TLV+G CRL V+RAI +
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 168 ----------KEMRKEGI------------EPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
E++ E + +PN + YN +ID L + G E + +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY----NYFFRY--- 258
PT++TYTSL+ GY K G + I+ G P Y N F +
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 259 ---------------------------------FSKFGKVEDAMNLYRKMIESGYTPDRL 285
F+K G++E A + M+ Y PD
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Query: 286 TYHILLKILC 295
T L+ C
Sbjct: 952 TVIELINESC 961
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 29/241 (12%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVSG 200
V +G L +GY ++ A+ + + P ++D L+ R ++ G
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLE---------------------GASKILKM 239
M+ER +V + + TY L+ +C+AG+++ GA K+ +
Sbjct: 212 MVERNVVFD----VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G +P TY+ K ++EDA +L +M G + D TY +L+ L K
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A + EM G +I I ++ + ++A A F+ MI GL+P +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 360 L 360
L
Sbjct: 388 L 388
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 177/365 (48%), Gaps = 15/365 (4%)
Query: 1 MIKVLA---KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++ VLA K K +SA+ + + G E PD V TF +I RA A+ E
Sbjct: 167 LLTVLAEGSKIKLLESAYTEMSSQ--GIE-PDVV---TFNTVIDALCRARQARTAVLMLE 220
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
++ D+ + + F L++ ++G ++AA + E+ +PT N+L+N
Sbjct: 221 EMSSCDVAPD----ETTFTTLMEGFVEEGSIEAALRLKARMSEM--GCSPTSVTVNVLIN 274
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ + V DA + + + P+ VT+ T V G C+ VD A++++ M +EG EP
Sbjct: 275 GYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEP 334
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+TVI+ L G EE G++ + + P T+ +L+ C LE A +
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLA 394
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +G P+ T+N K G A+ L+ +M SG TPD +TY+IL+ LC
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
KL A+ + KEM+ GC T +I LC+ + +EA F+ M G+ + +TF
Sbjct: 455 GKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITF 514
Query: 358 KRLND 362
L D
Sbjct: 515 NTLID 519
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 194/403 (48%), Gaps = 18/403 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF- 58
+I+ L A FD L+ + + GHEV + + I YAR + + A F+
Sbjct: 96 IIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQS----FIGSYARLQLFDDA---FDLV 148
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+N LDM + ++ LL L + ++K + + Q P V +N +++
Sbjct: 149 SNQLDMF-GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSS--QGIEPDVVTFNTVIDA 205
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R++ + A EM +V P+ T+ TL+EG+ ++ A+RL M + G P
Sbjct: 206 LCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPT 265
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++ N +I+G + GR + G +++ + P VT+++ V G C+ G ++ A K+L
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+M+ G P TY+ G++E+A + +M++SG PD T++ L+ LC E+
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+L+ A+ +++E+ +G ++ T +LI+ LC++ A FE+M G P +T+
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYN 445
Query: 359 RLNDEFKKRGMTALAQKLCNVM--SSVPRSM----ELLDSRCK 395
L D G A A L M S P+S ++D CK
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCK 488
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 6/295 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++D+LC+ + + A + D AP + L+ G+ +++ A R
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSSCD--VAPDETTFTTLMEGFVEEGSIEAALRLKAR 256
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +P VT L+ GYC+L RV A+ +++ +G EP+ + ++T ++GL + G
Sbjct: 257 MSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGH 316
Query: 195 FEEVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ ++ L CE P + TY++++ C G+LE A I+ M+ G LP TT+
Sbjct: 317 VDHALKVLGLMLQEGCE--PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTF 374
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++E+A++L R++ G +P+ T++IL+ LCK LA+++ +EMK
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS 434
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
GC D T +LI LC K +A ++M G +T+ + D KR
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR 489
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 148/294 (50%), Gaps = 6/294 (2%)
Query: 69 DSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
DSG + F L+ +LC + +++ A + R+ + +P V +NIL+N + +
Sbjct: 364 DSGCLPDTTTFNTLIVALCTENQLEEALDL--ARELTVKGLSPNVYTFNILINALCKVGD 421
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
A R + EM+ TP+ VTY L++ C ++ +A+ L+KEM G + + YNT
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+IDGL + R EE + ++ V G +T+ +L+ G C A ++ A++++ MIS G
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ TYN ++ K G + A ++ + M +G+ D +TY L+ LCK + A+
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ + M+ +G +I L R +A + F +M G P T+K
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYK 655
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 172/382 (45%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L +A++ +A +L + PD + TF L+ + G +EAA+ +
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPD---ETTFTTLMEGFVEEGSIEAALRLKARMS 258
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + +L++ CK GRV A Y + E+ + P ++ +NG
Sbjct: 259 EMGCSPT----SVTVNVLINGYCKLGRVGDALGYIQQ--EIADGFEPDRVTFSTFVNGLC 312
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +V A + M +E P+V TY T++ C ++ A +V +M G P+
Sbjct: 313 QNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTT 372
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I L + EE + V P + T+ L+ CK GD A ++ + M
Sbjct: 373 TFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM 432
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G P TYN GK+ A++L ++M SG +TY+ ++ LCK ++
Sbjct: 433 KSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRI 492
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A +V +M G + T LI LC + D+A+ + MI GL P+ +T+ +
Sbjct: 493 EEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSI 552
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ K+G + A + M++
Sbjct: 553 LTHYCKQGNISKAADILQTMTA 574
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 164/370 (44%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L E + A ++ + +PD TF LI +E A+ + A
Sbjct: 342 VINCLCNNGELEEAKGIVNQMVDSGCLPD---TTTFNTLIVALCTENQLEEAL---DLAR 395
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L VK F IL+++LCK G A F + K P YNIL++
Sbjct: 396 EL-TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS--SGCTPDEVTYNILIDNLC 452
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S + A EM + VTY T+++G C+ RR++ A + +M GI NAI
Sbjct: 453 SSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAI 512
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL A R ++ + ++++ + P VTY S++ YCK G++ A+ IL+ M
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K + + A+ L R M G P Y+ +++ L + +
Sbjct: 573 TANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG 632
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M G +P + +F+
Sbjct: 633 RDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRM 692
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 693 LAEGLLNLGM 702
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 147/330 (44%), Gaps = 8/330 (2%)
Query: 25 HEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
E+ D D TF + + G V+ A+ L + + + + +++ L
Sbjct: 291 QEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL----GLMLQEGCEPDVYTYSTVINCL 346
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C G ++ A ++ +D P +N L+ +++A E+ + ++P
Sbjct: 347 CNNGELEEAKGIVNQM--VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSP 404
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
NV T+ L+ C++ A+RL +EM+ G P+ + YN +ID L +G+ + ++
Sbjct: 405 NVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLL 464
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ V + VTY +++ G CK +E A ++ M G + T+N
Sbjct: 465 KEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNA 524
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+++DA L +MI G P+ +TY+ +L CK+ + A + + M G ++D+ T
Sbjct: 525 ERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTY 584
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LI+ LC+ + A M +G+ P
Sbjct: 585 ATLINGLCKARRTQAALKLLRGMRMKGMKP 614
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 147/342 (42%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T +LI Y + G V A+ + ++ F+ F ++ LC+ G V A +
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQ----QEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
L + P V Y+ ++N + +++A+ +M P+ T+ TL+
Sbjct: 324 LGLM--LQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C +++ A+ L +E+ +G+ PN +N +I+ L + G + E P
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ C +G L A +LK M G S TYN K ++E+A ++ +
Sbjct: 442 VTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ 501
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M +G + +T++ L+ LC +++D A ++ +M G + T ++ C+
Sbjct: 502 MDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+A+ + M G +T+ L + K T A KL
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKL 603
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 99/258 (38%), Gaps = 38/258 (14%)
Query: 161 DRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFE--------------EVS-GMME 203
+ A+R++ R +G+ P+ VY +I L AG F+ EV G+++
Sbjct: 70 EAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQ 129
Query: 204 RFL-------VCEPGPTMVT--------------YTSLVKGYCKAGDLEGASKILKMMIS 242
F+ + + +V+ Y L+ + ++ M S
Sbjct: 130 SFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSS 189
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+G P T+N + + A+ + +M PD T+ L++ +E ++
Sbjct: 190 QGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEA 249
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A+++ M GC T +LI+ C++ + +A + I G P +TF +
Sbjct: 250 ALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVN 309
Query: 363 EFKKRGMTALAQKLCNVM 380
+ G A K+ +M
Sbjct: 310 GLCQNGHVDHALKVLGLM 327
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 170/348 (48%), Gaps = 19/348 (5%)
Query: 36 FVILIRRYARAGMVE------AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F L+ R G VE AA+W + F+ LD + +++ SLC++GR K
Sbjct: 76 FGALVVVCCREGKVEEVDALLAAMWRYGFS--LD--------NATCTVVVRSLCEKGRFK 125
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
SE+F R+ L+ P V Y ++G + + VK A EM + PNV T+ T
Sbjct: 126 DVSEFF--RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 183
Query: 150 LVEGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L++G C++ +RA RL +K ++ +PN Y +I G G+ ++ R +
Sbjct: 184 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 243
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P TYT+L+ G+CK G + A +++ M GFLP+ TYN F K GK+++A
Sbjct: 244 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 303
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ R G D++TY IL+ CK+ + A+ + M GC D++ T LI
Sbjct: 304 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 363
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ + +E+ F+ + GL+P T+ + + K G + LA ++
Sbjct: 364 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 411
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 162/374 (43%), Gaps = 47/374 (12%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I L K + A+ +L + +G P+ + T LI + G E A F
Sbjct: 150 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT---LIDGLCKIGWTERAFRLF----- 201
Query: 62 LDMVKN--FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L ++K+ + + +++ C++G++ A +E R ++Q P Y L+ G
Sbjct: 202 LKLIKSSSYKPNVHTYTVMIGGYCREGKL-ARAEMLLVRM-VEQGLKPNTNTYTTLIGGH 259
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + A +M++E PN+ TY +++G+C+ ++ A ++++ +G++ +
Sbjct: 260 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 319
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y +I + G + +R + P + YTSL+ YC+ +E + K
Sbjct: 320 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 379
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ G LP+ TY + K G+ A+ ++ +M+++G D +TY L+ LCKE +
Sbjct: 380 CLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESR 439
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L +EA A +E M+ + LVP +T
Sbjct: 440 L-----------------------------------EEAKALYEGMLDKRLVPCEVTRVT 464
Query: 360 LNDEFKKRGMTALA 373
L E+ +R T++A
Sbjct: 465 LTFEYCRREKTSIA 478
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + + M + V+P +G LV CR +V+ L+ M + G + V+
Sbjct: 57 ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
L E GRF++VS R L P +V YT+ + G CK ++ A +L+ M+ RG P
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQV 306
+ T+ K G E A L+ K+I+ S Y P+ TY +++ C+E KL A +
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
M +G + +T T LI C+ FD A M + G +P+ T+ + D F K
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296
Query: 367 RGMTALAQKLCNVMSS 382
+G A K+ + +S
Sbjct: 297 KGKIQEAYKVLRMATS 312
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 14/276 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG----ASLFEILLDSLCKQGRVKA 90
T+ ++I Y R G + A + +V+ + G + + L+ CK G
Sbjct: 216 TYTVMIGGYCREGKLARA--------EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 267
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E +K K+ + + P + YN +++G+ + +++A + + + + +TY L
Sbjct: 268 AFELMNKMKQ--EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 325
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ +C+ + A+ L M + G P+ Y ++I + + EE ++ L+
Sbjct: 326 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 385
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT TYTS++ GYCK G A ++ + M+ G TY K ++E+A
Sbjct: 386 LPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKA 445
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
LY M++ P +T L C+ +K +A+ V
Sbjct: 446 LYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSV 481
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 46/311 (14%)
Query: 75 FEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
F L+ C++G+V+ + + LD + TV V ++ G F KD
Sbjct: 76 FGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC-TVVVRSLCEKGRF-----KDVSE 129
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ M + PNVV Y ++G C+ R V +A +++EM G++PN VY
Sbjct: 130 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN--VY-------- 179
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-LKMMISRGFLPSP 249
T+T+L+ G CK G E A ++ LK++ S + P+
Sbjct: 180 -------------------------THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNV 214
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY + + GK+ A L +M+E G P+ TY L+ CK D A ++ +
Sbjct: 215 HTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 274
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
MK G ++ T +I C+ K EA +GL +T+ L E K+G
Sbjct: 275 MKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH 334
Query: 370 TALAQKLCNVM 380
A L + M
Sbjct: 335 ITYALDLFDRM 345
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 81/227 (35%), Gaps = 35/227 (15%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+V + R+ A +V EMR G+ N V+ +E G F + +
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + +LV C+ G +E +L M GF T R + G+ +D
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+R+M+E+G P+ + Y + LCK + A V
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHV----------------------- 165
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
E+M+ RGL P+ T L D K G T A +L
Sbjct: 166 ------------LEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 200
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%)
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+V + +AG L A+ ++ M S G T N+ R + G A ++ M +
Sbjct: 8 GMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRA 67
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G +P + L+ + C+E K++ + M G +D T T+++ LC +F +
Sbjct: 68 GVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 127
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
S F M+ G P+ + + D KR
Sbjct: 128 SEFFRRMLETGTPPNVVNYTAWIDGLCKR 156
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 173/386 (44%), Gaps = 35/386 (9%)
Query: 25 HEVPDFVSKD--TFVILIRRYARAGMVEAAI-WTFEFANNLDMVKNFDSGASLFEILLDS 81
H++ F+S D T LI R G VE AI EF + + N L E +L
Sbjct: 679 HQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTE 738
Query: 82 -------------------------------LCKQGRVKAASEYFHKRKELDQSWAPTVR 110
LCK+ + A F K + + PT+
Sbjct: 739 AEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTK-NLGIHPTLE 797
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
YN L++G S + A + +M+ PN TY L++ + + +R+++ L EM
Sbjct: 798 SYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEM 857
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
R G EPNAI +N +I LV++ + + + + PT TY L+ G KAG
Sbjct: 858 RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A KI + M+ G P+ YN F K G+++ A L++KM++ G PD +Y IL
Sbjct: 918 EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
++ LC ++D A+Q +E+K G D D + +I+ L + + DEA + F +M RG+
Sbjct: 978 VECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGI 1037
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
P T+ L G +A K+
Sbjct: 1038 SPDLYTYNALILHLGIAGKVDVAVKM 1063
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 6/347 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I IR RA ++ A F+ ++ + + +L+D+LC G++ A E
Sbjct: 272 TYTICIRALGRARRIDDAWGIFKEMDD----EGCGPDVITYTVLIDALCAAGKLDKAKEL 327
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K + S +P Y L++ + + +++ +RFW EM + P+VVTY L+E
Sbjct: 328 YVKMRA--SSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEAL 385
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ VDRA ++ M +GI PN YNT+I GL++A R +E ++E PT
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+Y + Y K+GD A + M RG +PS N ++ G++ +A +++
Sbjct: 446 FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ + G +PD +TY++L+K K ++D A Q+ EM +GC+ D+ LI+ L + +
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGR 565
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
D A F + L P +T+ L K G A +L M+
Sbjct: 566 VDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMT 612
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 167/395 (42%), Gaps = 45/395 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + D A L + PD V T++ L+ ++ + G +E F N
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRV---TYITLMDKFGKVGDLETVK---RFWN 364
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ V + + IL+++LCK G V A + + P + YN ++ G
Sbjct: 365 EME-VDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTT--KGIFPNLHTYNTMICGLL 421
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ + +A M V P +Y ++ Y + +AI + M+K GI P+
Sbjct: 422 KARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIA 481
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N + L E GR E + C P VTY L+K Y KAG ++ A+++L M
Sbjct: 482 ACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEM 541
Query: 241 ISRG-----------------------------------FLPSPTTYNYFFRYFSKFGKV 265
IS+G P+ TYN K GK+
Sbjct: 542 ISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKI 601
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A+ L+ M ESG P+ +T++ LL L K D +DLA+++ M C+ D+ T +
Sbjct: 602 LKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTI 661
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
I+ L R + D A F M ++ L P Y+T L
Sbjct: 662 IYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTL 695
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 153/295 (51%), Gaps = 2/295 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +LLD+ K R+ + + + + + P +NI+++ +S N+ A + E
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRS--RGCEPNAITHNIIISALVKSNNLNKALDLYYE 891
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + +P TYG L++G + R ++A+++ +EM G PN+++YN +I+G ++G
Sbjct: 892 LMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + ++ + P + +YT LV+ C G ++ A + + + G P +YN+
Sbjct: 952 IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++++A++L+ +M G +PD TY+ L+ L K+D+A+++ +E++ G
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
+ + T LI D+A + F+ M+ G P+ TF +L +++ + G+
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGL 1126
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ +L ++G + + K + P + Y I + R++ + DA + E
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSI--GLRPNIYTYTICIRALGRARRIDDAWGIFKE 295
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E P+V+TY L++ C ++D+A L +MR P+ + Y T++D + G
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E V V P +VTYT L++ CK+GD++ A +L +M ++G P+ TYN
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++++A+ L M G P +Y + + K AI + MK RG
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ ++ L + EA F D+ + GL P +T+ L + K G A
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535
Query: 375 KLCNVMSS 382
+L + M S
Sbjct: 536 QLLSEMIS 543
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 7/318 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T++ + + + G + A + + + N S L +LL C + A Y
Sbjct: 168 TYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNE----ALKVY 223
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++ + + P+++ Y+ L+ R + + EM+ + PN+ TY +
Sbjct: 224 ---KRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRAL 280
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R RR+D A + KEM EG P+ I Y +ID L AG+ ++ + + P
Sbjct: 281 GRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDR 340
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ + K GDLE + M G+ P TY K G V+ A ++
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G P+ TY+ ++ L K +LD A+++ + M+ G + + I +
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 335 FDEASAEFEDMIRRGLVP 352
+A FE M +RG++P
Sbjct: 461 PAKAIDTFETMKKRGIMP 478
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 170/416 (40%), Gaps = 53/416 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K +KA + D A LL + I PD + ++ LI +AG V+AA F
Sbjct: 521 LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS---LINTLYKAGRVDAAWKMFGRLK 577
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NL + + + ILL L K+G++ A E F E P +N LL+
Sbjct: 578 NLKLAPTVVT----YNILLTGLGKEGKILKALELFGSMTE--SGCPPNTITFNSLLDCLS 631
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V A + + M N P+V+TY T++ G R R+D A +M+K + P+ +
Sbjct: 632 KNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYV 690
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL---------------------------------- 206
T+I G+V GR E+ ++ F+
Sbjct: 691 TLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEI 750
Query: 207 -----VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFS 260
VC+ M+ L+K CK A + K + G P+ +YN
Sbjct: 751 LVCNSVCQDDHVML---PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLL 807
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
E A+ L+ M +G P+ TY++LL K +++ + EM+ RGC+ +
Sbjct: 808 GSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAI 867
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T ++I L + ++A + +++ P T+ L D K G + A K+
Sbjct: 868 THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKI 923
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 9/267 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+ + A L + + G P + T+ LI +AG E A+ FE
Sbjct: 872 IISALVKSNNLNKALDLYYELMSGDFSP---TPCTYGPLIDGLLKAGRSEQAMKIFEEML 928
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N + ++ IL++ K G + A E F +K + + P ++ Y IL+
Sbjct: 929 DYGCGPN----SVIYNILINGFGKSGEIDFACELF--KKMVKEGIRPDLKSYTILVECLC 982
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A +++ E++ + P+ V+Y ++ G + RR+D A+ L EM+ GI P+
Sbjct: 983 ITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I L AG+ + M E + P++ TY +L++G+ +G+ + A + K M
Sbjct: 1043 TYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVED 267
+ G P+ T+ + + G V +
Sbjct: 1103 MVVGCSPNTETFAQLPNKYPRAGLVHN 1129
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 5/211 (2%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ G+C + A+++ K M EG++P+ Y+ ++ L G ++ ++E
Sbjct: 211 LLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIG 265
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + TYT ++ +A ++ A I K M G P TY GK++ A
Sbjct: 266 LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAK 325
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
LY KM S ++PDR+TY L+ K L+ + EM+ G D+ T T+LI L
Sbjct: 326 ELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEAL 385
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C+ D A + M +G+ P+ T+ +
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNLHTYNTM 416
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 2/294 (0%)
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
+A YF +L ++ T N +L + ++D + M+K+ + N+ TY
Sbjct: 112 NSAFSYFKIVSQL-TNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYM 170
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T+ + + RA +++M + G NA YN +I L+ G E + +R +
Sbjct: 171 TIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIH-LLLPGFCNEALKVYKRMISE 229
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P+M TY++L+ + GD +L+ M S G P+ TY R + +++DA
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
++++M + G PD +TY +L+ LC KLD A ++ +M+ D T L+
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDK 349
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++ + + +M G P +T+ L + K G A + +VM++
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTT 403
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 183/371 (49%), Gaps = 20/371 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F +L+R Y +A + F + + + ++ SL L L K G V A E
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSL----LGGLVKVGWVDLAWEI 84
Query: 95 FHKRKELDQSWAPTVRVY--NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+ +E+ +S V VY NI++N +++ +++ + F +M ++ V P+VVTY TL+
Sbjct: 85 Y---QEVVRS-GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 140
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
YCR ++ A L+ M +G++P YN +I+GL + G++ G+++ L P
Sbjct: 141 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 200
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
TY L+ C+ ++ A +I M S+G +P +++ SK G ++ A+ +
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 260
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R M +G PD + Y IL+ C+ + A++V EM +GC +D+ T +++ LC+
Sbjct: 261 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 320
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME---- 388
EA F +M RG+ P + TF L + + K G A L +M + R+++
Sbjct: 321 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM--IQRNLKPDVV 378
Query: 389 ----LLDSRCK 395
L+D CK
Sbjct: 379 TYNTLIDGFCK 389
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 167/356 (46%), Gaps = 17/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWT----F 56
+I +L+K D A D PD V + ILI + R G++ A+
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNV---IYTILIGGFCRNGVMSEALKVRDEML 299
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E LD+V + +L+ LCK+ + A E F + E + P + L+
Sbjct: 300 EQGCVLDVVT--------YNTILNGLCKEKMLSEADELFTEMTE--RGVFPDFYTFTTLI 349
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+ + N+ A + M + N+ P+VVTY TL++G+C+ +++ L +M I
Sbjct: 350 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 409
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN I Y +I+G G E + + + T++T ++VKGYC+AG+ A +
Sbjct: 410 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 469
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M+ +G +P TYN F K ++ A L KM SG PD +TY+++L +
Sbjct: 470 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 529
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ ++ A + +M RG + D T T LI+ EA ++M++RG VP
Sbjct: 530 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 11/335 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD VS F LI ++ G ++ A+ F N + + ++ IL+ C+ G
Sbjct: 234 VPDLVS---FSALIGLLSKNGCLDQALKYFRDMKNAGLAPD----NVIYTILIGGFCRNG 286
Query: 87 RVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
SE R E L+Q V YN +LNG + K + +A+ + EM + V P+
Sbjct: 287 ---VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 343
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ TL+ GY + +++A+ L + M + ++P+ + YNT+IDG + E+V+ +
Sbjct: 344 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 403
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++Y L+ GYC G + A ++ M+ +GF + T N + + + G
Sbjct: 404 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 463
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A M+ G PD +TY+ L+ KE+ +D A + +M+ G D+ T ++
Sbjct: 464 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 523
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ R + EA MI RG+ P T+ L
Sbjct: 524 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 558
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 179/421 (42%), Gaps = 52/421 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K ++ ++ L D PD V+ +T LI Y R G++E A FE +
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT---LINAYCRQGLLEEA---FELMD 156
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----SWAPTVRVYNILL 116
++ K + +++ LCK G+ Y + LD+ +P YNILL
Sbjct: 157 SMSG-KGLKPCVFTYNAIINGLCKTGK------YLRAKGVLDEMLKIGMSPDTATYNILL 209
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVT------------------------------ 146
R+ N+ DAER + EM + V P++V+
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269
Query: 147 -----YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
Y L+ G+CR + A+++ EM ++G + + YNT+++GL + E +
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
P T+T+L+ GY K G++ A + +MMI R P TYN F K
Sbjct: 330 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
++E L+ MI P+ ++Y IL+ C + A ++ EM +G + + T
Sbjct: 390 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ CR +A +M+ +G+VP +T+ L + F K A L N M
Sbjct: 450 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 509
Query: 382 S 382
+
Sbjct: 510 N 510
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ L K G + A +YF K + AP +Y IL+ G+ R+ + +A + E
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDMK--NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 297
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ +VVTY T++ G C+ + + A L EM + G+ P+ + T+I+G + G
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 357
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + E + P +VTY +L+ G+CK ++E +++ MISR P+ +Y
Sbjct: 358 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 417
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G V +A L+ +M+E G+ +T + ++K C+ A + M +G
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T LI+ + D A A M GL+P +T+ + + F ++G
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 531
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 9/256 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PDF TF LI Y++ G + A+ FE + +N + L+D CK
Sbjct: 340 PDFY---TFTTLINGYSKDGNMNKAVTLFEMM----IQRNLKPDVVTYNTLIDGFCKGSE 392
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ +E ++ + + P Y IL+NG+ V +A R W EM ++ ++T
Sbjct: 393 MEKVNELWNDM--ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 450
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T+V+GYCR +A + M +GI P+ I YNT+I+G ++ + ++ +
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 510
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY ++ G+ + G ++ A I+ MI RG P +TY +++
Sbjct: 511 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 570
Query: 268 AMNLYRKMIESGYTPD 283
A ++ +M++ G+ PD
Sbjct: 571 AFRVHDEMLQRGFVPD 586
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R E V ++ + C P + + LV+ Y +A L + +++ S+G S N
Sbjct: 9 RVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G V+ A +Y++++ SG + T +I++ LCK K++ +M+ +
Sbjct: 67 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
G D+ T LI+ CR +EA + M +GL P T+ + + K G
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG 181
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 152/300 (50%), Gaps = 6/300 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ + P V Y ++NG + A + +M + P+VVTY T+++ C+ RRV+
Sbjct: 4 RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 63
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ + M+ +GI PN YN++I GL R+ E S M+ + P +VT++ L+
Sbjct: 64 ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 123
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
+CK G++ A +LK M G P+ TY+ +S +V +A L+ MI G P
Sbjct: 124 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +Y+IL+ CK ++ A Q+ EM +G D+ + LI LC++ + EA F
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV---PRSME---LLDSRCKD 396
++M+ G +P T+ L D F K+G A A +L M S P + L+D+ CK
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 5/308 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++DSLCK RV A + F K + +P + YN L+ G ++A E
Sbjct: 48 YSTIIDSLCKDRRVNEALDIFSYMKA--KGISPNIFTYNSLIQGLCNFSRWREASAMLNE 105
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N+ PN+VT+ L+ +C+ V A ++K M + G+EPN + Y+++++G
Sbjct: 106 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 165
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P + +Y L+ GYCKA + A ++ MI +G P +YN
Sbjct: 166 VFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 225
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G++ +A +L++ M+ +G PD TY ILL CK+ L A ++ + M+
Sbjct: 226 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 285
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ +LI +C+ EA F ++ +GL P+ +K E KR M AL
Sbjct: 286 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF--EIWKR-MAALRM 342
Query: 375 KLCNVMSS 382
++SS
Sbjct: 343 NFLIMLSS 350
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 2/313 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ + + + +++ LCK G AA+ F K E P V Y+ +++ + +
Sbjct: 2 VARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGE--AGCQPDVVTYSTIIDSLCKDR 59
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V +A + M+ + ++PN+ TY +L++G C R A ++ EM I PN + ++
Sbjct: 60 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I+ + G E G+++ P +VTY+SL+ GY ++ A K+ +MI++
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P +YN + K ++ +A L+ +MI G TPD ++Y+ L+ LC+ +L A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ K M G DL T ++L+ C+ +A F M L P+ + + L D
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299
Query: 364 FKKRGMTALAQKL 376
K A+KL
Sbjct: 300 MCKSRNLKEARKL 312
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 9/287 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +I + V A+ F + K + L+ LC R
Sbjct: 43 PDVV---TYSTIIDSLCKDRRVNEALDIFSYMK----AKGISPNIFTYNSLIQGLCNFSR 95
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ AS ++ L+ P + +++L+N + + NV +A M + V PNVVTY
Sbjct: 96 WREASAMLNEMMSLN--IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTY 153
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ GY V A +L M +G +P+ YN +I+G +A R E + +
Sbjct: 154 SSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIH 213
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +V+Y +L+ G C+ G L A + K M++ G LP TY+ F K G +
Sbjct: 214 QGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAK 273
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
A L+R M + P+ + Y+IL+ +CK L A ++ E+ +G
Sbjct: 274 AFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 320
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 35/234 (14%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M G +P+ Y T+I+GL + G +G+ ++ P +VTY++++ CK
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A I M ++G P+ TYN + F + +A + +M+ P+ +T+ +
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 290 LLKILCKEDKLDLAIQVSKEMK-----------------------------------CRG 314
L+ I CKE + A V K M +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C D+ + +LI+ C+ + EA F +MI +GL P +++ L D + G
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 234
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++RG+ P TY K G+ A L++KM E+G PD +TY ++ LCK+ +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A+ + MK +G ++ T LI LC ++ EASA +M+ ++P+ +TF
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 360 LNDEFKKRGMTALAQKLCNVMSSV 383
L + F K G A+ + M+ +
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEM 144
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 170/354 (48%), Gaps = 9/354 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD + T+ LI Y +AG ++ A+W F + + + + ILLD C+ G
Sbjct: 369 LPDLI---TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLT----YNILLDGYCRLG 421
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + K++ ++Q P V Y IL+NG + +N+ F+ EM + + P+
Sbjct: 422 DLEEARRF--KQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T + L A +L + M GI + + YN +DGL ++G ++ + + +
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +TYT L+ +C+ G L A I M+ G PS TY F + + G +
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A ++KM+E G P+ +TY++L+ LC+ + +LA Q EM RG + T T+LI
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C+ ++EA + +M + G+ P + T L F + Q + NV+
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQYMENVV 713
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 9/342 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP V+ +T +I R+G VEAA F + ++ + + + L++ CK G
Sbjct: 334 VPTVVTYNT---IIHGMFRSGNVEAARMKFVEMRAMGLLPDLIT----YNSLINGYCKAG 386
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+K A F K AP+V YNILL+G+ R ++++A RF EM ++ P+V T
Sbjct: 387 NLKEALWLFGDLKR--AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVST 444
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G ++R + EM +G++P+ YNT I + G E + E +
Sbjct: 445 YTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMI 504
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
VTY + G CK+G+L+ A + M+S G P TY + G++
Sbjct: 505 SRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLR 564
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A +++ M+ SG P +TY + + C+ L A ++M G + T +LI
Sbjct: 565 EARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLI 624
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
H LCRM + + A F +M+ RGL P+ T+ L D K G
Sbjct: 625 HALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEG 666
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 171/427 (40%), Gaps = 78/427 (18%)
Query: 13 SAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDS 70
S CL ++ H VP F+ + V+ R + A W + +M++ +
Sbjct: 177 STLCLAAFREMAHHGVPPFIKECNLVLRALR-------DEARWDDMRSVYAEMLQLGIEP 229
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN------------- 117
+ LLDS ++GRV A++ + + P+ YN+++N
Sbjct: 230 SIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQ 289
Query: 118 ---------------------GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
G+F +V+ A LEM E + P VVTY T++ G R
Sbjct: 290 LVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFR 349
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
V+ A EMR G+ P+ I YN++I+G +AG +E + P+++T
Sbjct: 350 SGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLT 409
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN-----------------YFFRYF 259
Y L+ GYC+ GDLE A + + M+ +G P +TY +F
Sbjct: 410 YNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEML 469
Query: 260 SK------------------FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
SK G +A L MI G + D +TY+I L LCK L
Sbjct: 470 SKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLK 529
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + +M G D T T LIH C + EA F+ M+ GL P +T+
Sbjct: 530 DAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFI 589
Query: 362 DEFKKRG 368
+ +RG
Sbjct: 590 HAYCRRG 596
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 3/287 (1%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
R+ P ++ N++L D + EM + + P++VTY TL++ + R
Sbjct: 185 REMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFRE 244
Query: 158 RRVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RVD+A +L++EM R G P+ + YN VI+GL G E+ + +++R + + +
Sbjct: 245 GRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA-SAF 303
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+ L+ GY G +E A + M + G +P+ TYN + G VE A + +M
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD +TY+ L+ CK L A+ + ++K G + T +L+ CR+
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+EA ++M+ +G P T+ L + +K A+ ++ + M S
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLS 470
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 183/370 (49%), Gaps = 20/370 (5%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +L+R Y +A + F + + + ++ SL L L K G V A E +
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSL----LGGLVKVGWVDLAWEIY 346
Query: 96 HKRKELDQSWAPTVRVY--NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+E+ +S V VY NI++N +++ +++ + F +M ++ V P+VVTY TL+
Sbjct: 347 ---QEVVRSGV-QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YCR ++ A L+ M +G++P YN +I+GL + G++ G+++ L P
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
TY L+ C+ ++ A +I M S+G +P +++ SK G ++ A+ +R
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M +G PD + Y IL+ C+ + A++V EM +GC +D+ T +++ LC+
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME----- 388
EA F +M RG+ P + TF L + + K G A L +M + R+++
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM--IQRNLKPDVVT 640
Query: 389 ---LLDSRCK 395
L+D CK
Sbjct: 641 YNTLIDGFCK 650
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 167/356 (46%), Gaps = 17/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWT----F 56
+I +L+K D A D PD V + ILI + R G++ A+
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNV---IYTILIGGFCRNGVMSEALKVRDEML 560
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E LD+V + +L+ LCK+ + A E F + E + P + L+
Sbjct: 561 EQGCXLDVVT--------YNTILNGLCKEKMLSEADELFTEMTE--RGVFPDFYTFTTLI 610
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+ + N+ A + M + N+ P+VVTY TL++G+C+ +++ L +M I
Sbjct: 611 NGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 670
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN I Y +I+G G E + + + T++T ++VKGYC+AG+ A +
Sbjct: 671 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 730
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M+ +G +P TYN F K ++ A L KM SG PD +TY+++L +
Sbjct: 731 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 790
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ ++ A + +M RG + D T T LI+ EA ++M++RG VP
Sbjct: 791 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 11/335 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD VS F LI ++ G ++ A+ F N + + ++ IL+ C+ G
Sbjct: 495 VPDLVS---FSALIGLLSKNGCLDQALKYFRDMKNAGLAPD----NVIYTILIGGFCRNG 547
Query: 87 RVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
SE R E L+Q V YN +LNG + K + +A+ + EM + V P+
Sbjct: 548 ---VMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ TL+ GY + +++A+ L + M + ++P+ + YNT+IDG + E+V+ +
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 664
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++Y L+ GYC G + A ++ M+ +GF + T N + + + G
Sbjct: 665 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 724
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A M+ G PD +TY+ L+ KE+ +D A + +M+ G D+ T ++
Sbjct: 725 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 784
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ R + EA MI RG+ P T+ L
Sbjct: 785 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 819
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 179/421 (42%), Gaps = 52/421 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K ++ ++ L D PD V+ +T LI Y R G++E A FE +
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT---LINAYCRQGLLEEA---FELMD 417
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----SWAPTVRVYNILL 116
++ K + +++ LCK G+ Y + LD+ +P YNILL
Sbjct: 418 SMSG-KGLKPCVFTYNAIINGLCKTGK------YLRAKGVLDEMLKIGMSPDTATYNILL 470
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVT------------------------------ 146
R+ N+ DAER + EM + V P++V+
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530
Query: 147 -----YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
Y L+ G+CR + A+++ EM ++G + + YNT+++GL + E +
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
P T+T+L+ GY K G++ A + +MMI R P TYN F K
Sbjct: 591 FTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
++E L+ MI P+ ++Y IL+ C + A ++ EM +G + + T
Sbjct: 651 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 710
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ CR +A +M+ +G+VP +T+ L + F K A L N M
Sbjct: 711 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 770
Query: 382 S 382
+
Sbjct: 771 N 771
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ L K G + A +YF K + AP +Y IL+ G+ R+ + +A + E
Sbjct: 501 FSALIGLLSKNGCLDQALKYFRDMK--NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 558
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ +VVTY T++ G C+ + + A L EM + G+ P+ + T+I+G + G
Sbjct: 559 MLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGN 618
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + E + P +VTY +L+ G+CK ++E +++ MISR P+ +Y
Sbjct: 619 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 678
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G V +A L+ +M+E G+ +T + ++K C+ A + M +G
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T LI+ + D A A M GL+P +T+ + + F ++G
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 792
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 9/256 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PDF TF LI Y + G + A+ FE + +N + L+D CK
Sbjct: 601 PDFY---TFTTLINGYXKDGNMNKAVTLFEMM----IQRNLKPDVVTYNTLIDGFCKGSE 653
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ +E ++ + + P Y IL+NG+ V +A R W EM ++ ++T
Sbjct: 654 MEKVNELWNDM--ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 711
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T+V+GYCR +A + M +GI P+ I YNT+I+G ++ + ++ +
Sbjct: 712 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 771
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY ++ G+ + G ++ A I+ MI RG P +TY +++
Sbjct: 772 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 831
Query: 268 AMNLYRKMIESGYTPD 283
A ++ +M++ G+ PD
Sbjct: 832 AFRVHDEMLQRGFVPD 847
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 22/249 (8%)
Query: 123 KNVKDAERFWLEMRKE--NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNA 179
+N++ +RF + N ++ ++ ++ R RR+ A ++ M RK G+
Sbjct: 213 ENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS--- 269
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
R E V ++ + C P + + LV+ Y +A L + ++
Sbjct: 270 --------------RVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRV 313
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ S+G S N K G V+ A +Y++++ SG + T +I++ LCK K
Sbjct: 314 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 373
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ +M+ +G D+ T LI+ CR +EA + M +GL P T+
Sbjct: 374 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 433
Query: 360 LNDEFKKRG 368
+ + K G
Sbjct: 434 IINGLCKTG 442
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 165/338 (48%), Gaps = 11/338 (3%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
++F A+++ L+ LCK + + A E H + +V Y L++G +S ++
Sbjct: 4 RHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAA--NGYDASVVTYTTLIDGLCKSGDL 61
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A+ +M PNVVTY L++G C+ RR AI+ VK M + G EP+ + YN++
Sbjct: 62 DAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSL 121
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
I GL A R ++ +G++ + L+ E G P +VTY + + G CKAG L+ ++L+ M
Sbjct: 122 IHGLCMANRMDD-AGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P T+ K +++DA +++ M+E G PD LTY I+L L + ++LD
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+V + M G T LIH L R + AS +E + G V T
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300
Query: 364 FKKRGMTALAQKLCNVM---SSVPRSME---LLDSRCK 395
+ G LA+ + M S+P + ++D CK
Sbjct: 301 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 338
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 18/389 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+ + D+A LL P+ V T+ LI +A AI T +
Sbjct: 51 LIDGLCKSGDLDAAQALLQKMADAGCAPNVV---TYTALIDGLCKARRPHDAIQTVK--- 104
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ SG + L+ LC R+ A + ++ P V YN +
Sbjct: 105 -----RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELM-IESGRIPDVVTYNTFI 158
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G ++ + EM + ++P+VVT+ +++ G C+ R+D A ++ K M + G
Sbjct: 159 SGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV 218
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+++ Y+ ++D L A R + V ++E + TY L+ +AGD+E AS
Sbjct: 219 PDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWA 278
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ + G + T+N F + GK A N+ MIESG P+ L+Y+ ++ LCK
Sbjct: 279 YEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 338
Query: 297 EDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL-VPHY 354
+D A ++S++M G C D+ LI C+ + +A ++M + + VP
Sbjct: 339 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDV 398
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+T+ + D K G A+ L M +V
Sbjct: 399 VTYNTMIDGQSKFGSLKQAKLLLEEMQAV 427
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 40/208 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKI-GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
M+ L++A D+ +L + GH + T+ LI RAG +E+A W +E A
Sbjct: 227 MLDNLSRANRLDTVEEVLEHMVKSGH----YALSATYAPLIHALIRAGDIESASWAYEQA 282
Query: 60 ----------------------NNLDMVKNFDSG----ASL-----FEILLDSLCKQGRV 88
+ KN G SL + ++D LCK G V
Sbjct: 283 MEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNV 342
Query: 89 KAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV-TPNVVT 146
A + RK LD P V +N L++G+ ++ + A++ EM+ +N+ P+VVT
Sbjct: 343 DDAWKL--SRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVT 400
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
Y T+++G + + +A L++EM+ G
Sbjct: 401 YNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M SR F YN K K A+ L M +GY +TY L+ LCK
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD A + ++M GC ++ T T LI LC+ + +A + M+R G P +T+
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 360 L 360
L
Sbjct: 121 L 121
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 171/334 (51%), Gaps = 8/334 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ ILI ++ + G + A F N + F L++ LCK + E F
Sbjct: 226 YNILINKFCKEGSIRDAKLIF----NEIRKRGLRPTTVSFNTLINGLCKS---RNLDEGF 278
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+K ++++ P V Y++L++G + + AE+ + EM++ + PN +T+ L++G
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R RR+D A+ +M G++P+ ++YNT+++GL + G + +++ + P
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDK 398
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYT+L+ GYCK GDLE A +I K M G + + F + G+V DA R+
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E+G PD TY +++ CK+ + + ++ KEM+ G + T +L++ LC+ +
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
A+ E M+ G+ P +T+ L + K G
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 175/383 (45%), Gaps = 14/383 (3%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+ L K DSA + +LD G +FV F L+ Y +G V AI F
Sbjct: 123 IIRFLVSRKGKDSAASVFAAILD-TAGTRCSNFV----FDALMIAYWDSGFVSDAIQCFR 177
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
N + F L + +++S V + Y + L+ + P V+ YNIL+N
Sbjct: 178 LVRNSNFQIPFHGCGYLLDKMINS---NSPVTIWTFY---SEILEYGFPPKVQYYNILIN 231
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + +++DA+ + E+RK + P V++ TL+ G C+ R +D RL K M + I P
Sbjct: 232 KFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYP 291
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I GL + GR + + + P +T+T+L+ G ++ ++ A
Sbjct: 292 DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTY 351
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M++ G P YN K G V A L +M G PD++TY L+ CKE
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 411
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A+++ K M G +D T LI CR + +A +M+ G+ P T+
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ D + K+G + KL M
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEM 494
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 152/326 (46%), Gaps = 12/326 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K++ D + L PD T+ +LI + G ++ A F+
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIYPDVF---TYSVLIHGLCKEGRLDVAEQLFDEMQ 320
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N F L+D + R+ +A +H+ L P + +YN LLNG
Sbjct: 321 QRGLRPN----GITFTALIDGQYRSRRMDSAMNTYHQM--LTMGVKPDLVMYNTLLNGLC 374
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +V A + EM+ + P+ +TY TL++GYC+ ++ A+ + K M +EG+ + +
Sbjct: 375 KVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +I G GR + + + P TYT ++ GYCK G+++ K+LK M
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P TYN K G++++A L M+ G TPD +TY+ILL+ CK K
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKA 554
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ +++ E +G +D T L+
Sbjct: 555 EDLLKLRNE---KGLIVDYAYYTSLV 577
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 2/304 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ LC +G++ A F K + + + P V Y L+NG + N A R
Sbjct: 221 TTFNTLIRGLCVEGKIGEALHLF--DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLL 278
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M ++N PNV+ Y T+++ C+ R+V A L EM +GI P+ YN++I L
Sbjct: 279 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 338
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
++ V+ ++ + + P +V ++++V CK G + A ++ MMI RG P TY
Sbjct: 339 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 398
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
++++A+ ++ M+ G P+ +Y+IL+ C+ ++D A+ + ++M
Sbjct: 399 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 458
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G D T LIH LC + + A A F +M+ G +P +T++ L D K A
Sbjct: 459 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 518
Query: 373 AQKL 376
A L
Sbjct: 519 AMVL 522
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 165/377 (43%), Gaps = 41/377 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LIR G + A+ F+ + + F + L++ LCK G AA
Sbjct: 222 TFNTLIRGLCVEGKIGEALHLFDKT----IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRL 277
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + ++ P V YN +++ + + V +A + EM + ++P++ TY +L+
Sbjct: 278 L--RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C L L+ EM I PN +V++TV+D L + G +++ + P +
Sbjct: 336 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 395
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS-------------------------- 248
VTYT+L+ G+C +++ A K+ M+ +G +P+
Sbjct: 396 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 455
Query: 249 ---------PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
TYN G+++ A+ L+ +M+ SG PD +TY ILL LCK
Sbjct: 456 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 515
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A+ + K ++ D D+ + I +CR + + A F ++ +GL P T+
Sbjct: 516 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNI 575
Query: 360 LNDEFKKRGMTALAQKL 376
+ KRG+ A KL
Sbjct: 576 MIHGLCKRGLLDEANKL 592
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 168/377 (44%), Gaps = 24/377 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L E+ LL + + +P+ V F ++ + GM+ A +
Sbjct: 331 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVV---VFSTVVDALCKEGMIAIA------HD 381
Query: 61 NLDMV--KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+DM+ + + + L+D C + + A + F + + P VR YNIL+NG
Sbjct: 382 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM--VHKGCVPNVRSYNILING 439
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + + + A +M + + + VTY TL+ G C + R+ AI L EM G P+
Sbjct: 440 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 499
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y ++D L + E +++ ++ Y + G C+AG+LE A +
Sbjct: 500 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 559
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ S+G P TYN K G +++A L+RKM E+G + D Y+ +++ + +
Sbjct: 560 NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSN 619
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A Q+ +EM G D+ T+T+++ +L D FE + RG+
Sbjct: 620 ETFGATQLLQEMLAEGFSADVSTTTLIVEMLSD----DGLDQSFERLRLRGV-------G 668
Query: 359 RLNDEFKKRGMTALAQK 375
+ E RG+ L +K
Sbjct: 669 EEDRELHLRGVAVLGKK 685
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+ + LL + K+ +M + P+V T L+ +C LRR+ A +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G +P+ +NT+I GL G+ E + ++ + P +VTY +L+ G CK
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ A ++L+ M+ + P+ YN K +V +A NL+ +MI G +PD T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327
Query: 287 YHILLK-----------------------------------ILCKEDKLDLAIQVSKEMK 311
Y+ L+ LCKE + +A V M
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
RG + D+ T T L+ C + DEA F+ M+ +G VP+ ++ L
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 436
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 10/280 (3%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ DA + M + P+ V + L+ +++ + L +M GI P+
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I+ R ++ + L P T+ +L++G C G + A + I
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
GF P TY K G A+ L R M++ P+ + Y+ ++ LCK+ ++
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + EM +G D+ T LIH LC + ++ + +M+ ++P+ + F + D
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368
Query: 363 EFKKRGMTALAQKLCNVMSSVPRSME--------LLDSRC 394
K GM A+A + ++M + R +E L+D C
Sbjct: 369 ALCKEGMIAIAHDVVDMM--IKRGVEPDVVTYTALMDGHC 406
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 41/177 (23%)
Query: 261 KFGKVEDAMNLYRKMIES-----------------------------------GYTPDRL 285
F ++DA++ + +M+ G PD
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 186
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
T +IL+ C +L A V ++ GC D T LI LC K EA F+
Sbjct: 187 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 246
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
I G P +T+ L + K G T+ A +L N +V ++DS CKD
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 303
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
AS F L++ LC +G++K A E F++ + + P V YN ++NG ++ N A
Sbjct: 158 ASTFNALINGLCNEGKIKEAVELFNEM--VRRGHEPNVISYNTIINGLCKTGNTSMAVDV 215
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ +M + P+VVTY T+++ C+ R V+ A+ + EM GI PN YN ++ G
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E + + + + + P VT T LV G CK G + A + + M +G P+ +T
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + + +A ++ MI G P +Y+IL+ CK ++D A + EM
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ + D T + L+ LC+ + EA F++M GL+P+ +T+ L D F K G
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455
Query: 372 LAQKLCNVM 380
A KL M
Sbjct: 456 EALKLLKSM 464
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 159/319 (49%), Gaps = 9/319 (2%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ + A L + +G +PD V T IL+ + GMV A FE K +
Sbjct: 278 QLNEATRLFKEMVGRDVMPDTV---TLTILVDGLCKEGMVSEARLVFETMTE----KGVE 330
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S + L+D C Q + A + F + Q AP V YNIL+NG+ +S+ + +A+
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIM--IRQGCAPGVHSYNILINGFCKSRRMDEAK 388
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + + P+ VTY TL++G C+ R A+ + KEM G+ PN + Y+ ++DG
Sbjct: 389 SLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGF 448
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G +E +++ + P +V +T L++G AG LE A ++ + + G P+
Sbjct: 449 CKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTI 508
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY + K G ++A +L+RKM + G+ P+ +Y+++++ + AI++ E
Sbjct: 509 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 568
Query: 310 MKCRGCDIDLDTSTMLIHL 328
M + +L T ML+ L
Sbjct: 569 MVGKRFSANLSTFQMLLDL 587
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 15/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L + D A +L + K+G H + TF LI G ++ A+ F
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHP-----TASTFNALINGLCNEGKIKEAVELFN- 182
Query: 59 ANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+MV+ + + +++ LCK G A + F K ++ P V YN +++
Sbjct: 183 ----EMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ--NGCKPDVVTYNTIID 236
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + V DA F EM + PNV TY +V G+C L +++ A RL KEM + P
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + ++DGL + G E + E P + TY +L+ GYC + A K+
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
++MI +G P +YN F K ++++A +L +M PD +TY L++ LC+
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+ A+ + KEM G +L T ++L+ C+ DEA + M + L P+
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 169/354 (47%), Gaps = 12/354 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSL 82
GHE P+ +S +T +I + G A+ F+ M +N + ++DSL
Sbjct: 188 GHE-PNVISYNT---IINGLCKTGNTSMAVDVFK-----KMEQNGCKPDVVTYNTIIDSL 238
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK V A E+ + LD+ P V YN +++G+ + +A R + EM +V P
Sbjct: 239 CKDRLVNDAMEFLSEM--LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ VT LV+G C+ V A + + M ++G+EPN YN ++DG E +
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E + P + +Y L+ G+CK+ ++ A +L M + P TY+ + +F
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+ ++A+N++++M G P+ +TY ILL CK LD A+++ K M+ + + ++
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH 476
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T+LI + K + A F + G+ P T+ + K G++ A L
Sbjct: 477 TILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDL 530
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 128/274 (46%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+V + L + + K +M VT NV + L+ CRL VD A+ +
Sbjct: 86 PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K GI P A +N +I+GL G+ +E + + P +++Y +++ G CK
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ A + K M G P TYN K V DAM +M++ G P+ T
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ C +L+ A ++ KEM R D T T+L+ LC+ EA FE M
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G+ P+ T+ L D + + + A+K+ +M
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 131/270 (48%), Gaps = 5/270 (1%)
Query: 117 NGWFRSKN-----VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
NG F S N + DA + M + N P+V +G + + + ++ + L +M
Sbjct: 56 NGGFVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMD 115
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
G+ N N +I+ L + ++ + PT T+ +L+ G C G ++
Sbjct: 116 LFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIK 175
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A ++ M+ RG P+ +YN K G A+++++KM ++G PD +TY+ ++
Sbjct: 176 EAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII 235
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LCK+ ++ A++ EM RG ++ T ++H C + + +EA+ F++M+ R ++
Sbjct: 236 DSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM 295
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
P +T L D K GM + A+ + M+
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMT 325
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 177/350 (50%), Gaps = 15/350 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +LAK F A LL D++ +P +S + LIRRY RAGM A F
Sbjct: 140 MMDLLAKHHHFPLARHLL-DEMRKRSIP--ISSQVILALIRRYVRAGMSSEASDLFR--- 193
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ ++ LL +L K+ A F K + + P V +Y L++ W
Sbjct: 194 SMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSV---FTPDVVLYTTLVHAWC 250
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS + AE+ + EM++ + PNV TY +++ R +V RA L+ +M G PN
Sbjct: 251 RSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTA 310
Query: 181 VYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAG--DLEGASKI 236
+N ++ V+AGR E+V + R L C+P ++TY L++ +C G +L+ A K+
Sbjct: 311 TFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPD--IITYNFLMETHCGKGQSNLDAAMKL 368
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI++G P T+N + G V+ A LY +M E P+ +TY++L+K+ K
Sbjct: 369 LLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGK 428
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ +D+ +++ K+M +G + +++T LI C + A A +M+
Sbjct: 429 DKSMDMVLRIKKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREML 478
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 4/253 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+Y +++ + + A EMRK ++ + L+ Y R A L + M
Sbjct: 136 LYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSM 195
Query: 171 RKEGIE-PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
+ G P+ V +++ L + E + + + P +V YT+LV +C++G
Sbjct: 196 EEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVF-TPDVVLYTTLVHAWCRSGC 254
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
L+ A ++ M G +P+ TY + G+V A L +MI+SG P+ T++
Sbjct: 255 LDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNA 314
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC--RMYKFDEASAEFEDMIR 347
+++ K + + +QV +M+ GCD D+ T L+ C D A MI
Sbjct: 315 IMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIA 374
Query: 348 RGLVPHYLTFKRL 360
+G P TF +
Sbjct: 375 KGCTPDCHTFNPM 387
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + +A + A LL I P+ TF ++R + +AG E +
Sbjct: 280 VIDAMYRAGQVPRAQELLCQMIDSGCPPNTA---TFNAIMRAHVKAGRSEQVLQVHNQMR 336
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L D + L+++ C +G+ + K + + P +N +L
Sbjct: 337 QL----GCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVV 392
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
NV A + + M++ PNV+TY L++ + + + +D +R+ K+M +G+EPN
Sbjct: 393 VLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVN 452
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +I+ G ++ + L V P Y ++ KAG L +++++
Sbjct: 453 TYGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLRKAGQLRKHEELVEL 512
Query: 240 MISRGFLPSPT 250
M RGF+ P+
Sbjct: 513 MADRGFIKRPS 523
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 189/384 (49%), Gaps = 14/384 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K ++ D W D + V+ DT IRR A A AI F+
Sbjct: 125 MVDLLGKTRQIDRMW----DLLSEMHCRGLVTVDTVAKSIRRLAAARKWRDAILLFDQLE 180
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L + +N ++ +LLD+LCK+ +V+ A E F L AP +NI ++GW
Sbjct: 181 DLGLERNTET----MNVLLDALCKEKKVELAREVFVM---LSPHIAPDAYTFNIFVHGWC 233
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A EM+ P V+TY ++E YC+ R R ++ M +G PN I
Sbjct: 234 SVRRIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVI 293
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ L + RFEE + +R P + Y +L+ +AG L A+++ ++
Sbjct: 294 TYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVE 353
Query: 241 ISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ R G L + TYN ++G+ +DA+ + ++M PD TY LL++L
Sbjct: 354 MPRNGVLRNVATYNTMISILCQYGRDDDALGVLKEMEAQSCKPDLQTYQPLLRLLLGRRG 413
Query: 300 LDLAIQ-VSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
A+ + E++ R G +DLDT T+LIH LC++ + D A +++M+ +VP T
Sbjct: 414 QAAAVHRLLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWAYLLYDEMVGSEIVPRPRTC 473
Query: 358 KRLNDEFKKRGMTALAQKLCNVMS 381
+ L E +++ M A +++ N +S
Sbjct: 474 ELLLSEMQRQNMEAYVERIRNDVS 497
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 157/324 (48%), Gaps = 8/324 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C R+ A + E+ + P +N L++G F +A M
Sbjct: 157 LLNGYCHGKRISEAVALVDQMVEM--GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVA 214
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P++ TYGT+V G C+ +D A+ L+K+M K IE N ++YNT+IDGL + ++
Sbjct: 215 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDD 274
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + P + TY SL+ C G AS++L MI R P+ T+N
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F+K GK+ +A L+ +MI+ P+ +TY+ L+ C D+LD A Q+ M + C
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 394
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ T LI C+ + +E F +M +RGLV + +T+ L + G +AQK+
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 378 NVMSS--VPRSM----ELLDSRCK 395
M S VP + LLD CK
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCK 478
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 154/294 (52%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ LCK+G + A K ++ V +YN +++G + K++ DA + +
Sbjct: 224 YGTVVNGLCKRGDIDLALSLLKKMEK--GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+V TY +L+ C R A RL+ +M + I PN + +N++ID + G+
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P +VTY SL+ G+C L+ A +I +M+S+ LP TYN
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +VE+ M L+R+M + G + +TY+ L++ L + D+A ++ K+M G
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T ++L+ LC+ K ++A FE + + + P+ T+ + + K G
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 159/309 (51%), Gaps = 2/309 (0%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
++ ++ ++D LCK + A + F+K + + P V YN L++ D
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMET--KGIKPDVFTYNSLISCLCNYGRWSD 309
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A R +M + + PNVVT+ +L++ + + ++ A +L EM + I+PN + YN++I+
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 369
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G R +E + + + P +VTY +L+KG+CKA +E ++ + M RG +
Sbjct: 370 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 429
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN + + G + A +++KM+ G PD +TY ILL LCK KL+ A+ V
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ ++ + ++ T ++I +C+ K ++ F + +G+ P+ + + + F ++
Sbjct: 490 EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549
Query: 368 GMTALAQKL 376
G+ A L
Sbjct: 550 GLKEEADAL 558
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 10/312 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR AS +++ P V +N L++ + + + +AE+ + E
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDM--IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++ PN+VTY +L+ G+C R+D A ++ M + P+ + YNT+I G +A R
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411
Query: 195 FEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
EE M +R LV G T VTY +L++G +AGD + A KI K M+S G P
Sbjct: 412 VEEGMELFREMSQRGLV---GNT-VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ K+GK+E A+ ++ + +S P+ TY+I+++ +CK K++ + +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G ++ T +I CR +EA A F +M G +P + L + G
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 587
Query: 371 ALAQKLCNVMSS 382
A + +L M S
Sbjct: 588 AASAELIKEMRS 599
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 168/342 (49%), Gaps = 15/342 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K K D A+ L +K+ + PD + ++ + + Y R W+
Sbjct: 262 IIDGLCKYKHMDDAFDLF-NKMETKGIKPDVFTYNSLISCLCNYGR--------WSDASR 312
Query: 60 NNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
DM+ + + F L+D+ K+G++ A + F + + +S P + YN L+NG
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM--IQRSIDPNIVTYNSLING 370
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +A++ + M ++ P+VVTY TL++G+C+ +RV+ + L +EM + G+ N
Sbjct: 371 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 430
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT+I GL +AG + + ++ + P ++TY+ L+ G CK G LE A + +
Sbjct: 431 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 490
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ P+ TYN K GKVED +L+ + G P+ + Y ++ C++
Sbjct: 491 YLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 550
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+ A + +EMK G D LI R+ D+A++
Sbjct: 551 LKEEADALFREMKEDGTLPDSGCYNTLIR--ARLRDGDKAAS 590
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 131/262 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ++NG + ++ A +M K + NVV Y T+++G C+ + +D A L
Sbjct: 219 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDL 278
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M +GI+P+ YN++I L GR+ + S ++ + + P +VT+ SL+ + K
Sbjct: 279 FNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK 338
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ MI R P+ TYN F ++++A ++ M+ PD +T
Sbjct: 339 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 398
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ +++ +EM RG + T LI L + D A F+ M+
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D K G
Sbjct: 459 SDGVPPDIITYSILLDGLCKYG 480
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
Y+ILLN + R + A +M K P++VT +L+ GYC +R+ A+ LV +M
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ G +P+ + +NT+I GL + E +++R + P + TY ++V G CK GD+
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 237
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A +LK M + YN K+ ++DA +L+ KM G PD TY+ L
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC + A ++ +M R + ++ T LI + K EA F++MI+R +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
P+ +T+ L + F AQ++ +M S
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 389
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 159/330 (48%), Gaps = 11/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + A LL D I P+ V TF LI +A+ G + A F+
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVV---TFNSLIDAFAKEGKLIEAEKLFD--- 350
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+ ++ D + L++ C R+ A + F + + P V YN L+ G+
Sbjct: 351 --EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM--VSKDCLPDVVTYNTLIKGF 406
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V++ + EM + + N VTY TL++G + D A ++ K+M +G+ P+
Sbjct: 407 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 466
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y+ ++DGL + G+ E+ + E + P + TY +++G CKAG +E +
Sbjct: 467 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ Y F + G E+A L+R+M E G PD Y+ L++ ++
Sbjct: 527 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 586
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ KEM+ G D T +M+I++L
Sbjct: 587 KAASAELIKEMRSCGFVGDASTISMVINML 616
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 175/356 (49%), Gaps = 8/356 (2%)
Query: 29 DFVSKDT--FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
D ++ D+ F +LI+ YA+ GM++ A F N + + + ++ +LC+ G
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIF----NEMREQGVEPDVVTYSTVIAALCRIG 440
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A E F++ +DQ AP++ Y+ L+ G+ ++ A+ L+M + + P++
Sbjct: 441 KMDDAVEKFNQM--IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGC 498
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ ++ C+L RV A + G+ PN +VYNT++DG G+ E + + +
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV 558
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +V Y +LV GYCK G ++ + + ++ +G PS T YN + G+
Sbjct: 559 SAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTV 618
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + +M ESG DR TY I+L L K D AI + KE+ ID+ T ++I
Sbjct: 619 PAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ ++ + +EA F + R GLVP +T+ + K G+ A + + M +
Sbjct: 679 AGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMEN 734
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 176/374 (47%), Gaps = 9/374 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA+ D A +L + +PD T+ LI Y+ G + A+ +
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPD---NWTYNSLIYGYSSTGQWKEAVRVSKKMT 313
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ + + SL + SLCK G++K A + F Q + Y I+LNG+
Sbjct: 314 SQGILPDVVTLNSL----MASLCKHGKIKDARDVFDSMAMKGQKT--DIFSYKIMLNGYA 367
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ D + M + + P+ + L++ Y + +DRA + EMR++G+EP+ +
Sbjct: 368 TKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+TVI L G+ ++ + + P++ TY L++G+C GDL A ++ M
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQM 487
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++G P +N+ K G+V DA N++ I G P+ + Y+ L+ C K+
Sbjct: 488 MNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKM 547
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A++V M G ++ L++ C++ + DE + F +++ +G+ P + +
Sbjct: 548 ENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNII 607
Query: 361 NDEFKKRGMTALAQ 374
+ G T A+
Sbjct: 608 LHGLFQAGRTVPAK 621
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I+L SLC + A E E P YN +++G+F+ +V A + EM
Sbjct: 184 IVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMV 243
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ ++P++ TY +V C+ R +D+A ++++M +G+ P+ YN++I G G+++
Sbjct: 244 QRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWK 303
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + ++ P +VT SL+ CK G ++ A + M +G +Y
Sbjct: 304 EAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIML 363
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
++ G + D L+ M+ G PD +++L+K K LD A + EM+ +G +
Sbjct: 364 NGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVE 423
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T + +I LCR+ K D+A +F MI +G+ P T+ L F G
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 154/329 (46%), Gaps = 8/329 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + ++D K+G V A + F++ + + +P + YN ++N +++ + AE
Sbjct: 216 AVAYNTVIDGFFKEGDVNKACDLFNEM--VQRGISPDLSTYNCVVNALCKARAMDKAEAI 273
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+M + V P+ TY +L+ GY + A+R+ K+M +GI P+ + N+++ L +
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ ++ + + + + +Y ++ GY G L +++ +M+S G P
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + ++K G ++ A ++ +M E G PD +TY ++ LC+ K+D A++ +M
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G + T LI C +A M+ +G+ P F + + K G
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513
Query: 372 LAQKLCNVMSSV---PRSM---ELLDSRC 394
AQ + + S+ P M L+D C
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYC 542
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 12/288 (4%)
Query: 32 SKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
S T+ LI+ + G +++A + N K F ++++LCK GRV
Sbjct: 460 SISTYHFLIQGFCTHGDLLKAKDLVLQMMN-----KGMRPDIGCFNFIINNLCKLGRVMD 514
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A F + P V VYN L++G+ +++A R + M + PNVV YGTL
Sbjct: 515 AQNIFDFTISI--GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTL 572
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
V GYC++ R+D + L +E+ +GI+P+ +YN ++ GL +AGR V ++ + E
Sbjct: 573 VNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR--TVPAKVKFHEMTES 630
Query: 211 GPTM--VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
G M TY+ ++ G K + A + K + + TT N + +VE+A
Sbjct: 631 GIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEA 690
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+L+ + SG P +TY I++ L KE ++ A + M+ GC+
Sbjct: 691 KDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S + ++++LCK + A R+ +D+ P YN L+ G+ + K+A R
Sbjct: 252 STYNCVVNALCKARAMDKAEAIL--RQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVS 309
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M + + P+VVT +L+ C+ ++ A + M +G + + Y +++G
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G +++ + L P + L+K Y K G L+ A+ I M +G P TY
Sbjct: 370 GCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTY 429
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ + GK++DA+ + +MI+ G P TYH L++ C L A + +M
Sbjct: 430 STVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMN 489
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G D+ +I+ LC++ + +A F+ I GL P+ + + L D + G
Sbjct: 490 KGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMEN 549
Query: 373 AQKLCNVMSS 382
A ++ +VM S
Sbjct: 550 ALRVFDVMVS 559
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 8/306 (2%)
Query: 83 CKQGRVKAASEYFH-KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
C+ G A + + R + +PT+ Y IL++ R+ K F+ ++ K +
Sbjct: 81 CRDGPALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLG 140
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIR-LVKEMRKEGIEPNAIVYNTVIDGLV---EAGRFEE 197
+ + L+ G C +R A+ L+ M G P+ Y V+ L ++G+ +E
Sbjct: 141 IDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADE 200
Query: 198 VSGMM-ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ MM E VC P V Y +++ G+ K GD+ A + M+ RG P +TYN
Sbjct: 201 LLRMMAEGGAVCL--PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVV 258
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K ++ A + R+M++ G PD TY+ L+ + A++VSK+M +G
Sbjct: 259 NALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGIL 318
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+ T L+ LC+ K +A F+ M +G ++K + + + +G +L
Sbjct: 319 PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTEL 378
Query: 377 CNVMSS 382
N+M S
Sbjct: 379 FNLMLS 384
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 177/351 (50%), Gaps = 9/351 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K D A+ L + +G PD V T+ IL+ + G + AI + N
Sbjct: 204 IIDRLCKDTLVDEAYDLYTEMVGKGISPDVV---TYSILVSGFCIVGQLNRAI---DLLN 257
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +++N + + IL+D+LCK+G+VK A + V VY+ L++G+
Sbjct: 258 EM-VLENINPDIYTYTILVDALCKEGKVKEAENVLAVM--VKACVNLDVVVYSTLMDGYC 314
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V +A+R + M + VTP+V Y ++ G C+++RVD A+ L +E+ ++ + P+ +
Sbjct: 315 LVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTV 374
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ID L ++GR V + + L P ++TY +L+ CK G L+ A + M
Sbjct: 375 TYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM 434
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P+ T+ K G++++A+ ++ ++ GY + TY +++ LCKE L
Sbjct: 435 KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLL 494
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D A+ + M+ GC D T ++I + D+A +MI RGL+
Sbjct: 495 DEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 150/302 (49%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ C G++ A + ++ + ++ P + Y IL++ + VK+AE
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEM--VLENINPDIYTYTILVDALCKEGKVKEAENVLAV 293
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V +VV Y TL++GYC + V+ A R+ M + G+ P+ Y+ +I+GL + R
Sbjct: 294 MVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKR 353
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E P VTYTSL+ CK+G + + M+ RG P TYN
Sbjct: 354 VDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNN 413
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G ++ A+ L+ KM + P+ T+ ILL LCK +L A++ +++ +G
Sbjct: 414 LIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG 473
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+++ T T++I+ LC+ DEA A M G + +TF+ + F + A+
Sbjct: 474 YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAE 533
Query: 375 KL 376
KL
Sbjct: 534 KL 535
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 166/375 (44%), Gaps = 17/375 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQG 86
PD+ T I+I + G V A F+ ++K + L+ LC +G
Sbjct: 91 PDYF---TLNIIINCFCHFGQVVLA-----FSGVSKILKLGYQPNTITLNTLMKGLCLEG 142
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+VK A FH K L Q + + Y IL+NG + + A R + + ++ PNVV
Sbjct: 143 KVKEALR-FHD-KVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVI 200
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +++ C+ VD A L EM +GI P+ + Y+ ++ G G+ ++ +
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + TYT LV CK G ++ A +L +M+ Y+ + +V
Sbjct: 261 LENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVN 320
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A ++ M + G TPD Y I++ LCK ++D A+ + +E+ + D T T LI
Sbjct: 321 NAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLI 380
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------ 380
LC+ + F++M+ RG P +T+ L D K G A L N M
Sbjct: 381 DCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIR 440
Query: 381 SSVPRSMELLDSRCK 395
+V LLD CK
Sbjct: 441 PNVYTFTILLDGLCK 455
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P +N +L K A + +M V P+ T ++ +C +V A
Sbjct: 55 TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
V ++ K G +PN I NT++ GL G+ +E ++ L + ++Y L+ G C
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVC 174
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+ A ++L+ + P+ Y+ K V++A +LY +M+ G +PD +
Sbjct: 175 KIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY IL+ C +L+ AI + EM + D+ T T+L+ LC+ K EA M
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM 294
Query: 346 IRRGLVPHYLTFKRLNDEF 364
++ + + + L D +
Sbjct: 295 VKACVNLDVVVYSTLMDGY 313
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%)
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ N DA + M + TP+ + ++ ++R AI L K+M +EP+
Sbjct: 36 THNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFT 95
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
N +I+ G+ + + L P +T +L+KG C G ++ A + ++
Sbjct: 96 LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVL 155
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
++GF S +Y K G+ A+ L R++ P+ + Y +++ LCK+ +D
Sbjct: 156 AQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + EM +G D+ T ++L+ C + + + A +M+ + P T+ L
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275
Query: 362 DEFKKRGMTALAQKLCNVM 380
D K G A+ + VM
Sbjct: 276 DALCKEGKVKEAENVLAVM 294
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 9/342 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ +LI Y ++G +E A+ + A+ ++ +L SLC +G++K A +
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRMG-------VSPNAATYDAVLCSLCDRGKLKQAMQV 203
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ +L P V +L++ + V A + + EMR + P+VVTY L++G+
Sbjct: 204 LGR--QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGF 261
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R+D AIR +K++ G +P+ I +N ++ L GR+ + ++ L P++
Sbjct: 262 CKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSV 321
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+ L+ C+ G L A +L+MM G P+ ++N + F ++ A+
Sbjct: 322 VTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEI 381
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G PD +TY+ILL LCK+ K+D A+ + ++ +GC L + +I L ++ K
Sbjct: 382 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 441
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ A E+M +GL P +T + + G A K
Sbjct: 442 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 159/349 (45%), Gaps = 12/349 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ LIR + + G + A V + S + +L+ CK G
Sbjct: 112 PDVIA---CTALIREFCKIGRTKNASQIMGILEESGAVIDVTS----YNVLISGYCKSGE 164
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + +P Y+ +L +K A + + P+VVT
Sbjct: 165 IEEALRVLDR-----MGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTC 219
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++ C+ V +A++L EMR +G +P+ + YN +I G + GR +E +++
Sbjct: 220 TVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS 279
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++++ +++ C G A K+L M+ +G LPS T+N + + G +
Sbjct: 280 YGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGK 339
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+N+ M + G+TP+ +++ L++ C +D AI+ + M RGC D+ T +L+
Sbjct: 340 ALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLT 399
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ K D+A + +G P +++ + D K G LA +L
Sbjct: 400 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 448
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 153/335 (45%), Gaps = 17/335 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFE----FANNLDMVKNFDSGASLFEILLDSLC 83
PD V T+ +LI+ + + G ++ AI + + D++ + ++L SLC
Sbjct: 249 PDVV---TYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISH--------NMILRSLC 297
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
GR A + L + P+V +NIL+N + + A M K TPN
Sbjct: 298 SGGRWMDAMKLLATM--LRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 355
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
++ L++G+C + +DRAI ++ M G P+ + YN ++ L + G+ ++ ++
Sbjct: 356 SRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 415
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P++++Y +++ G K G E A ++L+ M +G P T S+ G
Sbjct: 416 QLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREG 475
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
KV +AM + + P+ Y+ ++ LCK + LAI +M +GC T T
Sbjct: 476 KVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYT 535
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
LI + ++AS ++ RGLV L K
Sbjct: 536 TLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEK 570
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 12/262 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ILI + G++ A+ E N S F L+ C + A EY
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS----FNPLIQGFCNGKGIDRAIEY 378
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P + YNILL + V DA ++ + +P++++Y T+++G
Sbjct: 379 LEIM--VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 436
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPG 211
++ + + A+ L++EM +G++P+ I +V+ GL G+ E ++RF +
Sbjct: 437 LKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAI---R 493
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P Y S++ G CK+ A L M+++G P+ TY + + G EDA L
Sbjct: 494 PNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553
Query: 272 YRKMIESGYTPDRLTYHILLKI 293
++ G L + L++
Sbjct: 554 SNELYSRGLVKRSLVEKVSLEV 575
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 178/353 (50%), Gaps = 11/353 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ + GG V+ T I+IRRY V AI TF
Sbjct: 153 MISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVGKAINTFYAHK 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F G F+ LL +LC+ V+ A + + + + + +NI+LNGW
Sbjct: 213 QF----KFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNV---FPFDTKSFNIILNGWC 265
Query: 121 RS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++++AERFW EM + +VV+Y +++ Y ++ +++ ++L +M++ I P+
Sbjct: 266 NVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDR 325
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VYN V+ L +A +E +M+ P VTY SL+K +A + A ++
Sbjct: 326 KVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDE 385
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ RG P+ TY+ FFR K G E+ L KM E+G PD+ TY +L++ C+ +
Sbjct: 386 MLQRGLSPTIRTYHAFFRIL-KSG--EEVFMLLEKMKETGCHPDKDTYIMLIRRFCRWRQ 442
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LD ++ EM G D + +LIH L K +EA + +M + +P
Sbjct: 443 LDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMKEKQFLP 495
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 13/261 (4%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRRVD 161
+A ++R Y+ +++ + + A EMR ++VT TL + YC + V
Sbjct: 143 YAHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVG 202
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE----PGPTMVTY 217
+AI ++ + ++ L R++ V E+ L C P T ++
Sbjct: 203 KAINTFYAHKQFKFGVGIEEFQNLLSALC---RYKNVQDA-EQLLFCNRNVFPFDTK-SF 257
Query: 218 TSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
++ G+C G + A + + M +RG +Y+ +SK + + L+ +M
Sbjct: 258 NIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMK 317
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
E PDR Y+ ++ L K + A+ + K M+ +G D T LI L R K +
Sbjct: 318 EMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKIN 377
Query: 337 EASAEFEDMIRRGLVPHYLTF 357
EA F++M++RGL P T+
Sbjct: 378 EAKEVFDEMLQRGLSPTIRTY 398
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 183/370 (49%), Gaps = 20/370 (5%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +L+R Y +A + F + + + ++ SL L L K G V A E +
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSL----LGGLVKVGWVDLAWEIY 242
Query: 96 HKRKELDQSWAPTVRVY--NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+E+ +S V VY NI++N +++ +++ + F +M ++ V P+VVTY TL+
Sbjct: 243 ---QEVVRSGV-QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YCR ++ A L+ M +G++P YN +I+GL + G++ G+++ L P
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
TY L+ C+ ++ A +I M S+G +P +++ SK G ++ A+ +R
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M +G PD + Y IL+ C+ + A++V EM +GC +D+ T +++ LC+
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME----- 388
EA F +M RG+ P + TF L + + K G A L +M + R+++
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM--IQRNLKPDVVT 536
Query: 389 ---LLDSRCK 395
L+D CK
Sbjct: 537 YNTLIDGFCK 546
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 167/356 (46%), Gaps = 17/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWT----F 56
+I +L+K D A D PD V + ILI + R G++ A+
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNV---IYTILIGGFCRNGVMSEALKVRDEML 456
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E LD+V + +L+ LCK+ + A E F + E + P + L+
Sbjct: 457 EQGCVLDVVT--------YNTILNGLCKEKMLSEADELFTEMTE--RGVFPDFYTFTTLI 506
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+ + N+ A + M + N+ P+VVTY TL++G+C+ +++ L +M I
Sbjct: 507 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 566
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN I Y +I+G G E + + + T++T ++VKGYC+AG+ A +
Sbjct: 567 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 626
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M+ +G +P TYN F K ++ A L KM SG PD +TY+++L +
Sbjct: 627 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 686
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ ++ A + +M RG + D T T LI+ EA ++M++RG VP
Sbjct: 687 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 11/335 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD VS F LI ++ G ++ A+ F N + + ++ IL+ C+ G
Sbjct: 391 VPDLVS---FSALIGLLSKNGCLDQALKYFRDMKNAGLAPD----NVIYTILIGGFCRNG 443
Query: 87 RVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
SE R E L+Q V YN +LNG + K + +A+ + EM + V P+
Sbjct: 444 ---VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ TL+ GY + +++A+ L + M + ++P+ + YNT+IDG + E+V+ +
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 560
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++Y L+ GYC G + A ++ M+ +GF + T N + + + G
Sbjct: 561 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 620
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A M+ G PD +TY+ L+ KE+ +D A + +M+ G D+ T ++
Sbjct: 621 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 680
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ R + EA MI RG+ P T+ L
Sbjct: 681 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 715
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 179/421 (42%), Gaps = 52/421 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K ++ ++ L D PD V+ +T LI Y R G++E A FE +
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT---LINAYCRQGLLEEA---FELMD 313
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----SWAPTVRVYNILL 116
++ K + +++ LCK G+ Y + LD+ +P YNILL
Sbjct: 314 SMSG-KGLKPCVFTYNAIINGLCKTGK------YLRAKGVLDEMLKIGMSPDTATYNILL 366
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVT------------------------------ 146
R+ N+ DAER + EM + V P++V+
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426
Query: 147 -----YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
Y L+ G+CR + A+++ EM ++G + + YNT+++GL + E +
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 486
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
P T+T+L+ GY K G++ A + +MMI R P TYN F K
Sbjct: 487 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
++E L+ MI P+ ++Y IL+ C + A ++ EM +G + + T
Sbjct: 547 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 606
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ CR +A +M+ +G+VP +T+ L + F K A L N M
Sbjct: 607 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 666
Query: 382 S 382
+
Sbjct: 667 N 667
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ L K G + A +YF K + AP +Y IL+ G+ R+ + +A + E
Sbjct: 397 FSALIGLLSKNGCLDQALKYFRDMK--NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 454
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ +VVTY T++ G C+ + + A L EM + G+ P+ + T+I+G + G
Sbjct: 455 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 514
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + E + P +VTY +L+ G+CK ++E +++ MISR P+ +Y
Sbjct: 515 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 574
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G V +A L+ +M+E G+ +T + ++K C+ A + M +G
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T LI+ + D A A M GL+P +T+ + + F ++G
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 688
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 9/256 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PDF TF LI Y++ G + A+ FE + +N + L+D CK
Sbjct: 497 PDFY---TFTTLINGYSKDGNMNKAVTLFEMM----IQRNLKPDVVTYNTLIDGFCKGSE 549
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ +E ++ + + P Y IL+NG+ V +A R W EM ++ ++T
Sbjct: 550 MEKVNELWNDM--ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 607
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T+V+GYCR +A + M +GI P+ I YNT+I+G ++ + ++ +
Sbjct: 608 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 667
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY ++ G+ + G ++ A I+ MI RG P +TY +++
Sbjct: 668 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 727
Query: 268 AMNLYRKMIESGYTPD 283
A ++ +M++ G+ PD
Sbjct: 728 AFRVHDEMLQRGFVPD 743
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 22/249 (8%)
Query: 123 KNVKDAERFWLEMRKE--NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNA 179
+N++ +RF + N ++ ++ ++ R RR+ A ++ M RK G+
Sbjct: 109 ENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS--- 165
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
R E V ++ + C P + + LV+ Y +A L + ++
Sbjct: 166 --------------RVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRV 209
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ S+G S N K G V+ A +Y++++ SG + T +I++ LCK K
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 269
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ +M+ +G D+ T LI+ CR +EA + M +GL P T+
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 329
Query: 360 LNDEFKKRG 368
+ + K G
Sbjct: 330 IINGLCKTG 338
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 179/377 (47%), Gaps = 38/377 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF--- 56
+I +LAK FD+ W +L + K ++P TF +LI YA++GM E A+ +F
Sbjct: 102 VIDMLAKDDGFDTYWKILEELKNSNIQIP----PPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 57 -EFANNLD----------MVK-----------------NFDSGASLFEILLDSLCKQGRV 88
+F D MV+ N++ + F ILL+ LCK G+
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A + F + + + P +Y I+L+G ++K D R M+ P+ +T
Sbjct: 218 DDALKMFDEMTQ--KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCN 275
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L++G+C+L ++D A L++ KEG Y+++IDGL A R++EV +
Sbjct: 276 ALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA 335
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P +V YT L++G+C+ G ++ A +L M RG P YN + F G ++ A
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA 395
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+L ++ ++ P TY IL+ +C+ LD A Q+ +M+ GC + T LI
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 329 LCRMYKFDEASAEFEDM 345
LC+ + +EA F M
Sbjct: 456 LCKAGELEEARHLFYKM 472
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 145/345 (42%), Gaps = 37/345 (10%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N F +L+ + K G + A E F K K D P V YN +L+ + +
Sbjct: 126 NIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK--DFGCKPDVFTYNSILHVMVQKEVFL 183
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + +M K N PN T+ L+ G C+ + D A+++ EM ++GI PN ++Y ++
Sbjct: 184 LALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM------- 239
GL +A R ++V ++ V P +T +L+ G+CK G ++ A +L++
Sbjct: 244 SGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303
Query: 240 ----------------------------MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
M G P Y R F + G V+ A+N+
Sbjct: 304 LGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNM 363
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M + G +PD Y+ L+K C LD A + E+ C T T+LI +CR
Sbjct: 364 LNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCR 423
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DEA F M G P +TF L D K G A+ L
Sbjct: 424 NGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHL 468
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 154/347 (44%), Gaps = 50/347 (14%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LLD CK G++ A ++ + + ++ Y+ L++G FR+K + + + +M K
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEK--EGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFK 334
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ P+VV Y L+ G+C + VD A+ ++ +M + G+ P+ YN +I G + G ++
Sbjct: 335 AGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + PT TYT L+ G C+ G L+ A +I M + G PS T+N
Sbjct: 395 ARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALID 454
Query: 258 YFSKFGKVEDAMNLYRKM------------------------------------------ 275
K G++E+A +L+ KM
Sbjct: 455 GLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAY 514
Query: 276 ------IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+SG PD +TY++L+ CK ++ A ++ +E++ +G D T LI
Sbjct: 515 KLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGF 574
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
R+ + ++A + M++ G P +K L ++G ++A L
Sbjct: 575 HRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSL 621
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 15/306 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ IL+ C+ G V A + + + +P YN L+ G+ + A L
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQ--RGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ K + P TY L+ G CR +D A ++ +M G P+ + +N +IDGL +AG
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460
Query: 194 RFEEVSGMMER---------FLVCEPGPTMVTYT----SLVKGYCKAGDLEGASKILKMM 240
EE + + FL G V T ++V+ C++G + A K+L +
Sbjct: 461 ELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQL 520
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G +P TYN F K + A L+R++ G++PD +TY L+ + D+
Sbjct: 521 ADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDRE 580
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A +V +M GC L+ CR K A + + +R T K
Sbjct: 581 EDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLA 640
Query: 361 NDEFKK 366
+ F+K
Sbjct: 641 EEHFEK 646
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 138/327 (42%), Gaps = 45/327 (13%)
Query: 35 TFVILIRRYARAGMVEAA---IWTFEFANNLDMVKNFDSGA------SLFEILLDSLCKQ 85
TF LI +AG +E A + E N + GA + + +++ LC+
Sbjct: 448 TFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCES 507
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G + A + + D P + YN+L+NG+ ++KN+ A + + E++ + +P+ V
Sbjct: 508 GLILKAYKLLMQLA--DSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSV 565
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TYGTL++G+ R+ R + A R++ +M K G P++ VY ++ G+ + ++
Sbjct: 566 TYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKY 625
Query: 206 LVCEPGP----------------------------------TMVTYTSLVKGYCKAGDLE 231
L P + YT + G C+A E
Sbjct: 626 LRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSE 685
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A KI ++ +P + K G +E A++++ +E G+ + LL
Sbjct: 686 EALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLL 745
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDID 318
+ L +DK+ A+ + M G D+D
Sbjct: 746 RSLILQDKMKHALDLLNRMNSAGYDLD 772
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 130/309 (42%), Gaps = 6/309 (1%)
Query: 76 EILLDSLCKQGRVKAASEYF--HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
EI+ D + +Q R + +F R+ +SW +N++++ + +
Sbjct: 65 EIVNDVMREQRRPELGFRFFIWTTRRRSFRSWV----THNLVIDMLAKDDGFDTYWKILE 120
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E++ N+ T+ L+ Y + ++A+ +M+ G +P+ YN+++ +V+
Sbjct: 121 ELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKE 180
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F + + L P T+ L+ G CK G + A K+ M +G P+ Y
Sbjct: 181 VFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYT 240
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + +D L M SG PD +T + LL CK ++D A + + +
Sbjct: 241 IILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKE 300
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + + + LI L R ++DE M + G+ P + + L F + GM A
Sbjct: 301 GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYA 360
Query: 374 QKLCNVMSS 382
+ N M+
Sbjct: 361 LNMLNDMTQ 369
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 158/340 (46%), Gaps = 30/340 (8%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F + T+ ILI R G+++ A F NL + + F L+D LCK G ++
Sbjct: 408 FPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMT----FNALIDGLCKAGELE 463
Query: 90 AASEYFHKRKELDQSWAPTVRV------------YNILLNGWFRSKNVKDAERFWLEMRK 137
A F+K E+ ++ + +R+ ++ S + A + +++
Sbjct: 464 EARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLAD 522
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
V P+++TY L+ G+C+ + ++ A +L +E++ +G P+++ Y T+IDG R E+
Sbjct: 523 SGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREED 582
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-LKMMISRGFLPSPT--TYNY 254
++++ + P+ Y L+ C+ G L A + LK + S LPS T
Sbjct: 583 AFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS---LPSQEDETLKL 639
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRL---TYHILLKILCKEDKLDLAIQVSKEMK 311
+F K G++E A+ R ++E + + Y I L LC+ + + A+++ +K
Sbjct: 640 AEEHFEK-GELEKAV---RCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLK 695
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D++ + MLI+ LC+ + A F + +G +
Sbjct: 696 ECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFM 735
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 44/252 (17%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ +L++ CK + A + F +EL + +P Y L++G+ R +DA R
Sbjct: 532 YNVLINGFCKAKNINGAFKLF---RELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLD 588
Query: 134 EMRKENVTPNVVTYGTLVEGYCR--------------LRRV----DRAIRLVKEMRKEGI 175
+M K TP+ Y L+ CR LR + D ++L +E ++G
Sbjct: 589 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGE 648
Query: 176 EPNAI----------------VYNTVIDGLVEAGRFEEVSGMMERFLV---CEPGPTMVT 216
A+ Y + GL +A R EE ++ FLV C+ +
Sbjct: 649 LEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEA---LKIFLVLKECQMDVNPPS 705
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
L+ G CK G+LE A I + +GF+ P N R K++ A++L +M
Sbjct: 706 CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMN 765
Query: 277 ESGYTPDRLTYH 288
+GY D +H
Sbjct: 766 SAGYDLDEYLHH 777
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 165/328 (50%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC +GRV A E + E+ P + N L+NG S +A +
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHK--PDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VTYG ++ C+ + A+ L+++M + I+ +A+ Y+ +IDGL + G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + ++TY L+ G+C AG + +K+L+ MI R P+ T++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+ +A L+++MI G PD +TY L+ CKE+ LD A Q+ M +G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
CD ++ T +LI+ C+ + D+ F M RG+V +T+ L F + G +A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 375 KLCNVMSS--VPRSME----LLDSRCKD 396
+L M S VP ++ LLD C +
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 157/311 (50%), Gaps = 2/311 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N A + I++D LCK G + A F++ + + + YNIL+ G+ +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM--KGITTNIITYNILIGGFCNAGRW 314
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
D + +M K + PNVVT+ L++ + + ++ A L KEM GI P+ I Y ++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG + ++ + M++ + P + T+ L+ GYCKA ++ ++ + M RG
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ TYN + F + GK+ A L+++M+ P+ +TY ILL LC + + A++
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ ++++ ++D+ ++IH +C K D+A F + +G+ P T+ +
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 366 KRGMTALAQKL 376
K+G + A+ L
Sbjct: 555 KKGPLSEAELL 565
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 147/266 (55%), Gaps = 2/266 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
+L+ +CK G+ A E K +E ++ Y+I+++G + ++ +A + EM
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ +T N++TY L+ G+C R D +L+++M K I PN + ++ +ID V+ G+ E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P +TYTSL+ G+CK L+ A++++ +M+S+G P+ T+N
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K +++D + L+RKM G D +TY+ L++ C+ KL++A ++ +EM R
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFE 343
++ T +L+ LC + ++A FE
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFE 497
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 2/291 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC G K A K ++ P Y +LN +S A +M +
Sbjct: 199 LVNGLCLSG--KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
N+ + V Y +++G C+ +D A L EM +GI N I YN +I G AGR+++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ ++ + + P +VT++ L+ + K G L A ++ K MI RG P TY
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K ++ A + M+ G P+ T++IL+ CK +++D +++ ++M RG
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T LI C + K + A F++M+ R + P+ +T+K L D G
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV ++ L + ++K +M + + N+ T ++ +CR R++ A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EPN I ++T+I+GL GR E +++R + P ++T +LV G C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G A ++ M+ G P+ TY K G+ AM L RKM E D +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK LD A + EM+ +G ++ T +LI C ++D+ + DMI
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRSM---ELLDSRCKD 396
+R + P+ +TF L D F K G A++L M P ++ L+D CK+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 6/325 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++M K + + IL+ C GR ++
Sbjct: 266 YSIIIDGLCKHGSLDNA---FNLFNEMEM-KGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + P V +++L++ + + +++AE EM + P+ +TY +L++G+C
Sbjct: 322 --RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ +D+A ++V M +G +PN +N +I+G +A R ++ + + + V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L++G+C+ G L A ++ + M+SR P+ TY G+ E A+ ++ K+
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y+I++ +C K+D A + + +G + T ++I LC+
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
EA F M G P T+ L
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I A +D LL D I P+ V TF +LI + + G + A E +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVV---TFSVLIDSFVKEGKLREA----EELH 356
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D CK+ + A++ + + P +R +NIL+NG+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM--VSKGCDPNIRTFNILINGYC 414
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + D + +M V + VTY TL++G+C L +++ A L +EM + PN +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G E+ + E+ + + Y ++ G C A ++ A + +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P TYN K G + +A L+RKM E G+ PD TY+IL++ +
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
++++ +E+K G +D T M+I +L
Sbjct: 595 TKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT++ ++ L K + + K M +G + T + F + K+ A
Sbjct: 84 PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+I+ GY P+ +T+ L+ LC E ++ A+++ M G DL T L++ L
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C K EA + M+ G P+ +T+ + + K G TALA +L
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+ D AI L ++M P I ++ + + + +++ V + ++ + + T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ +C+ L A + +I G+ P+ T++ G+V +A+ L +M+E
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 279 GYTPD-----------------------------------RLTYHILLKILCKEDKLDLA 303
G+ PD +TY +L ++CK + LA
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+++ ++M+ R +D +++I LC+ D A F +M +G+ + +T+ L
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 364 FKKRG 368
F G
Sbjct: 308 FCNAG 312
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 177/350 (50%), Gaps = 34/350 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K+L+K ++F + W L+ + E P + + FV+L++R+A A MV+ AI +
Sbjct: 146 MVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIEVLD--- 200
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K F+ +F LLD+LCK G VK A++ F +
Sbjct: 201 --EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-------------------- 238
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++M + P++V Y L+ GY ++ A L+++MR+ G EPNA
Sbjct: 239 MRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 298
Query: 180 IVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
Y +I L + R EE + MER+ E +VTYT+LV G+CK G ++ +
Sbjct: 299 NCYTVLIQALCKVDRMEEAMKVFVEMERY---ECEADVVTYTALVSGFCKWGKIDKCYIV 355
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI +G +PS TY + K E+ + L KM + Y PD Y++++++ CK
Sbjct: 356 LDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACK 415
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
++ A+++ EM+ G +DT ++I+ L EAS F++M+
Sbjct: 416 LGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEML 465
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 23/227 (10%)
Query: 134 EMRKENVTPNVVT---YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
EMRKEN P ++ + LV+ + V +AI ++ EM K G EP+ V+ ++D L
Sbjct: 165 EMRKEN--PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALC 222
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G ++ + + E + + G + A +L M GF P
Sbjct: 223 KHGSVKDAAKLFEDMRM------------------RVGKMMEAKYVLVQMNEAGFEPDIV 264
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
Y ++ GK+ DA +L R M G+ P+ Y +L++ LCK D+++ A++V EM
Sbjct: 265 DYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 324
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ C+ D+ T T L+ C+ K D+ +DMI++GL+P LT+
Sbjct: 325 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTY 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 130/324 (40%), Gaps = 66/324 (20%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-----FDSGASLFEILLDSL 82
PD V + L+ YA AG + A+ D++++ F+ A+ + +L+ +L
Sbjct: 261 PDIVD---YTNLLSGYANAG---------KMADAYDLLRDMRRRGFEPNANCYTVLIQAL 308
Query: 83 CKQGRVKAASEYF--HKRKELDQS-------------WA------------------PTV 109
CK R++ A + F +R E + W P+
Sbjct: 309 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE 368
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
Y ++ + ++ ++ +MR+ P++ Y ++ C+L V A+RL E
Sbjct: 369 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNE 428
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M + G+ P + +I+GL G E S + L L+ K
Sbjct: 429 MEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEML-------------LLNTVLKDKK 475
Query: 230 LEGASKILKMMISRGF--LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
LE A + + S+G L + + FSK G ++A + +MIE + P T+
Sbjct: 476 LEMAKDVWSCITSKGACELNVLSWTIWIHALFSK-GYEKEACSYCIEMIEMDFMPQPDTF 534
Query: 288 HILLKILCKEDKLDLAIQVSKEMK 311
L+K L K + A +++++++
Sbjct: 535 AKLMKGLKKLYNREFAGEITEKVR 558
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 57/382 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F ILI+ + + A+ TF L F F LL LC + RV A +
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKL----GFHPTLVTFNTLLHGLCVEDRVSEALDL 72
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
FH Q P V + L+NG R V +A M ++ + PN +TYGT+V+G
Sbjct: 73 FH------QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 155 CRLRRVDRAIRLVK------------------------------------EMRKEGIEPN 178
C++ A+ L++ EM+ +GI P+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ +I+G +G++ E +++ LV + P +VT++ L+ K GDL A +L+
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-----------GYTPDRLTY 287
MIS G P+ T N GK++DA+ +++ M +S G PD TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+IL+ L E K A ++ +EM RG D T + +I+ LC+ + DEA+ F+ M
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366
Query: 348 RGLVPHYLTFKRLNDEFKKRGM 369
+ P+ +TF L + K GM
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGM 388
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 18/346 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
TF L+ R G V A+ + MV++ + ++D +CK G +A
Sbjct: 83 TFTTLMNGLCREGRVVEAVALLD-----RMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K +EL P V +Y+ +++G ++ DA+ ++EM+ + + P++VTY ++ G
Sbjct: 138 LLRKMEELSH-IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C + A RL++EM I P+ + ++ +I+ LV+ G +++ + P
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMIS-----------RGFLPSPTTYNYFFRYFSKF 262
+VT +L+ G C +G L+ A ++ K M G P TYN
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GK +A LY +M G PD +TY ++ LCK+ +LD A Q+ M + ++ T
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI C+ D+ F +M RRG+V + +T+ L F+K G
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 13/259 (5%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+V+ F L+++L K+G + +A + + + P V N LL+G S
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM--ISSGVCPNVVTCNTLLDGLCDSG 271
Query: 124 NVKDAERFWLEMRK-----------ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+KDA + M+K V P+V TY L+ G + A L +EM
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GI P+ + Y+++I+GL + R +E + M + P +VT+ +L+ GYCKAG ++
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
++ M RG + + TY R F K G + +++++++MI SG PD +T +L
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451
Query: 293 ILCKEDKLDLAIQVSKEMK 311
L +++L A+ + +E++
Sbjct: 452 GLWSKEELKRALAMLEELQ 470
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 13/251 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ C G+ A + L + +P V ++ L+N + ++ A+ E
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEM--LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK-----------EGIEPNAIVYN 183
M V PNVVT TL++G C ++ A+ + K M+K G+EP+ YN
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL+ G+F E + E P VTY+S++ G CK L+ A+++ M S+
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
F P+ T+N + K G V+D + L+ +M G + +TY L++ K ++ +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 304 IQVSKEMKCRG 314
+ + +EM G
Sbjct: 428 LDIFQEMISSG 438
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ ++ L++ +C ++ A+ ++ K G P + +NT++ GL R E +
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ +C+P +VT+T+L+ G C+ G + A +L M+ G P+ TY K
Sbjct: 74 HQ--MCKP--NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 263 GKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G A+NL RKM E S PD + Y ++ L K+ + A + EM+ +G D+ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ +I+ C K+ EA ++M+ R + P +TF L + K G AQ L M
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 382 S------VPRSMELLDSRC 394
S V LLD C
Sbjct: 250 SSGVCPNVVTCNTLLDGLC 268
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 42/352 (11%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
V T +++R + G V A+W F + + N + F +++ LCK+G VK
Sbjct: 235 VDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLIN----FTCMIEGLCKRGSVKQ 290
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGT 149
A E + + + W P V + L++G + + A R +L++ R EN PNV+TY
Sbjct: 291 AFEMLEEM--VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTA 348
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ GYCR +++RA L+ M+++G+ PN
Sbjct: 349 MISGYCRDEKMNRAEMLLSRMKEQGLAPNT------------------------------ 378
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
TYT+L+ G+CKAG+ E A +++ +M GF P+ TYN K G+V++A
Sbjct: 379 -----NTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAY 433
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ + +G D++TY IL+ CK+ ++ A+ + +M G D+ + T LI +
Sbjct: 434 KVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVF 493
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
CR + E+ FE+ +R GLVP T+ + + + G LA K + MS
Sbjct: 494 CREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMS 545
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 7/321 (2%)
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A +L KNF+ + + ++ S + GRVK A E + +Q AP+ + N ++
Sbjct: 119 AASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMH--NQGLAPSTKTLNWVVKI 176
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
V+ AE + EM V PN V+Y +V GYC+L V + R + M + G +
Sbjct: 177 VTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVD 236
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKI 236
+ ++ E G RF CE G P ++ +T +++G CK G ++ A ++
Sbjct: 237 NATLSLIVREFCEKGFVTRALWYFRRF--CEMGLRPNLINFTCMIEGLCKRGSVKQAFEM 294
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILC 295
L+ M+ RG+ P+ T+ K G E A L+ K++ S + P+ LTY ++ C
Sbjct: 295 LEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYC 354
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+++K++ A + MK +G + +T T LI C+ F+ A M G P+
Sbjct: 355 RDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVC 414
Query: 356 TFKRLNDEFKKRGMTALAQKL 376
T+ + D K+G A K+
Sbjct: 415 TYNAIVDGLCKKGRVQEAYKV 435
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 160/380 (42%), Gaps = 27/380 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ L K A+ +L + +G P+ T LI + G E A F
Sbjct: 278 MIEGLCKRGSVKQAFEMLEEMVGRGWKPNVY---THTALIDGLCKKGWTEKAFRLF---- 330
Query: 61 NLDMVK--NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L +V+ N + ++ C+ ++ A + KE Q AP Y L++G
Sbjct: 331 -LKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKE--QGLAPNTNTYTTLIDG 387
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++ N + A M +E +PNV TY +V+G C+ RV A +++K + G++ +
Sbjct: 388 HCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDAD 447
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y +I + ++ + + + P + +YT+L+ +C+ ++ + +
Sbjct: 448 KVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFE 507
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ G +P+ TY + + G + A+ + +M + G D +TY L+ LCK+
Sbjct: 508 EAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQS 567
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
KLD A + M +G T L + C K D+ + + +
Sbjct: 568 KLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC---KIDDGCSAM------------VVLE 612
Query: 359 RLNDEFKKRGMTALAQKLCN 378
RL + R + L +KLC+
Sbjct: 613 RLEKKLWVRTVNTLVRKLCS 632
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 7/253 (2%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+V+ + + RV AI +V EM +G+ P+ N V+ + E G E + +
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P V+Y +V GYCK G++ + + L MI RGF+ T + R F + G V A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+R+ E G P+ + + +++ LCK + A ++ +EM RG ++ T T LI L
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317
Query: 330 CRMYKFDEASAEFEDMIR-RGLVPHYLTFKRL-----NDEFKKRGMTALAQ-KLCNVMSS 382
C+ ++A F ++R P+ LT+ + DE R L++ K + +
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377
Query: 383 VPRSMELLDSRCK 395
L+D CK
Sbjct: 378 TNTYTTLIDGHCK 390
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 57/382 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F ILI+ + + A+ TF L F F LL LC + RV A +
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKL----GFHPTLVTFNTLLHGLCVEDRVSEALDL 72
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
FH Q P V + L+NG R V +A M ++ + PN +TYGT+V+G
Sbjct: 73 FH------QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 155 CRLRRVDRAIRLVK------------------------------------EMRKEGIEPN 178
C++ A+ L++ EM+ +GI P+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ +I+G +G++ E +++ LV + P +VT++ L+ K GDL A +L+
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-----------GYTPDRLTY 287
MIS G P+ T N GK++DA+ +++ M +S G PD TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+IL+ L E K A ++ +EM RG D T + +I+ LC+ + DEA+ F+ M
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366
Query: 348 RGLVPHYLTFKRLNDEFKKRGM 369
+ P+ +TF L + K GM
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGM 388
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 18/346 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
TF L+ R G V A+ + MV++ + ++D +CK G +A
Sbjct: 83 TFTTLMNGLCREGRVVEAVALLD-----RMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K +EL P V +Y+ +++G ++ DA+ ++EM+ + + P++VTY ++ G
Sbjct: 138 LLRKMEELSH-IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C + A RL++EM I P+ + ++ +I+ LV+ G +++ + P
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMIS-----------RGFLPSPTTYNYFFRYFSKF 262
+VT +L+ G C +G L+ A ++ K M G P TYN
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GK +A LY +M G PD +TY ++ LCK+ +LD A Q+ M + ++ T
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI C+ D+ F +M RRG+V + +T+ L F+K G
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 13/259 (5%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+V+ F L+++L K+G + +A + + + P V N LL+G S
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM--ISSGVCPNVVTCNTLLDGLCDSG 271
Query: 124 NVKDAERFWLEMRKE-----------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+KDA + M+K V P+V TY L+ G + A L +EM
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GI P+ + Y+++I+GL + R +E + M + P +VT+ +L+ GYCKAG ++
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
++ M RG + + TY R F K G + +++++++MI SG PD +T +L
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451
Query: 293 ILCKEDKLDLAIQVSKEMK 311
L +++L A+ + +E++
Sbjct: 452 GLWSKEELKKALAMLEELQ 470
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 13/251 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ C G+ A + L + +P V ++ L+N + ++ A+ E
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEM--LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-----------GIEPNAIVYN 183
M V PNVVT TL++G C ++ A+ + K M+K G+EP+ YN
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL+ G+F E + E P VTY+S++ G CK L+ A+++ M S+
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
F P+ T+N + K G V+D + L+ +M G + +TY L++ K ++ +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 304 IQVSKEMKCRG 314
+ + +EM G
Sbjct: 428 LDIFQEMISSG 438
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ ++ L++ +C ++ A+ ++ K G P + +NT++ GL R E +
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ +C+P +VT+T+L+ G C+ G + A +L M+ G P+ TY K
Sbjct: 74 HQ--MCKP--NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 263 GKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G A+NL RKM E S PD + Y ++ L K+ + A + EM+ +G D+ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ +I+ C K+ EA ++M+ R + P +TF L + K G AQ L M
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 382 S------VPRSMELLDSRC 394
S V LLD C
Sbjct: 250 SSGVCPNVVTCNTLLDGLC 268
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 12/368 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I IR RAG ++ A + + + + +L+D+LC G++ A E
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMED----EGCGPDVVTYTVLIDALCAAGKLDKAKEL 319
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K + S P + Y L++ + +++ +RFW EM + P+VVTY LVE
Sbjct: 320 YTKMRA--SSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEAL 377
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +VD+A ++ MR GI PN YNT+I GL+ R +E + PT
Sbjct: 378 CKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTA 437
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+Y + Y K GD E A + M RG +PS N ++ G++ +A +++
Sbjct: 438 YSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFND 497
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G +PD +TY++++K K ++D A ++ EM GC+ D+ LI L + +
Sbjct: 498 IHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGR 557
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM--SSVPRSM----E 388
DEA F + L P +T+ L K G A L M S P +
Sbjct: 558 VDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNA 617
Query: 389 LLDSRCKD 396
LLD CK+
Sbjct: 618 LLDCLCKN 625
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 3/300 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ LCKQ + A + F K K L PT YN L++G + A + ++EM+
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTH--PTPESYNCLMDGLLGCNITEAALKLFVEMK 815
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
PN+ TY L++ + + +R+D L EM G +PN I +N +I LV++
Sbjct: 816 NAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSIN 875
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + + PT TY L+ G KAG E A KI + M P+ YN
Sbjct: 876 KALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILI 935
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
F K G V A +L+++MI+ G PD +Y IL++ L ++D A+ +E+K G D
Sbjct: 936 NGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLD 995
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D + ++I+ L + + +EA + F +M RG+ P T+ L F GM A K+
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 162/375 (43%), Gaps = 13/375 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA--IWTFEF 58
+I L A + D A L PD V T++ L+ ++ G +E W+
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLV---TYITLMSKFGNYGDLETVKRFWSEME 359
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A+ + + IL+++LCK G+V A + + + P + YN L++G
Sbjct: 360 ADG------YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV--RGIVPNLHTYNTLISG 411
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +A + M V P +Y ++ Y +L ++A+ ++M+K GI P+
Sbjct: 412 LLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS 471
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
N + L E GR E + C P VTY ++K Y KAG ++ A+K+L
Sbjct: 472 IAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLT 531
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+S G P N K G+V++A ++ ++ + P +TY+IL+ L KE
Sbjct: 532 EMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEG 591
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
KL A+ + MK GC + T L+ LC+ D A F M P LT+
Sbjct: 592 KLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYN 651
Query: 359 RLNDEFKKRGMTALA 373
+ K G A
Sbjct: 652 TIIYGLIKEGRAGYA 666
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D L +AA + F + K + P + YN+LL+ +SK + + + E
Sbjct: 791 YNCLMDGLLGCNITEAALKLFVEMK--NAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PN++T+ ++ + +++A+ L E+ P Y +I GL++AGR
Sbjct: 849 MLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGR 908
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE + E + P Y L+ G+ KAG++ A + K MI G P +Y
Sbjct: 909 SEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+V+DA++ + ++ +G PD ++Y++++ L K +L+ A+ + EMK RG
Sbjct: 969 LVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG 1028
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+L T LI D+A FE++ GL P+ T+ L K G
Sbjct: 1029 ISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSG 1082
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 154/344 (44%), Gaps = 7/344 (2%)
Query: 26 EVPDFVSKDTFVILIRRYARA-GMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCK 84
++P+ V + + R G VE + F+ + +N ++ ++F+ +L
Sbjct: 114 QLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFK----ALSI 169
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
+G ++ A K ++ + YN L+ + K+A + + M E + P++
Sbjct: 170 KGGIRQAPFALGKMRQ--AGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSM 227
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
TY L+ R R + L++EM G+ PN Y I L AGR ++ G+++
Sbjct: 228 KTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKT 287
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
GP +VTYT L+ C AG L+ A ++ M + P TY F +G
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD 347
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+E + +M GY PD +TY IL++ LCK K+D A + M+ RG +L T
Sbjct: 348 LETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNT 407
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI L + + DEA F +M G+ P ++ D + K G
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLG 451
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y I + R+ + DA M E P+VVTY L++ C ++D+A L
Sbjct: 260 PNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKEL 319
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+MR +P+ + Y T++ G E V P +VTYT LV+ CK
Sbjct: 320 YTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCK 379
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G ++ A +L +M RG +P+ TYN ++++A+ L+ M G P +
Sbjct: 380 SGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y + + K + A+ ++MK RG + ++ L M + EA F D+
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
GL P +T+ + + K G A KL M S
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS 535
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 17/315 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFV---ILIRRYARAGMVEAAIWTF 56
+++ L K+ + D A+ +L + ++ G VP+ + +T + + +RR A
Sbjct: 373 LVEALCKSGKVDQAFDMLDVMRVRGI-VPNLHTYNTLISGLLNLRRLDEA---------L 422
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E NN++ + + S + + +D K G + A + F K K+ + P++ N L
Sbjct: 423 ELFNNMESLGVAPTAYS-YVLFIDYYGKLGDPEKALDTFEKMKK--RGIMPSIAACNASL 479
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+++A+ + ++ ++P+ VTY +++ Y + ++D+A +L+ EM EG E
Sbjct: 480 YSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCE 539
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ IV N++ID L +AGR +E M R + PT+VTY L+ G K G L A +
Sbjct: 540 PDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDL 599
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M G P+ T+N K V+ A+ ++ +M +PD LTY+ ++ L K
Sbjct: 600 FGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIK 659
Query: 297 EDKLDLAIQVSKEMK 311
E + A +MK
Sbjct: 660 EGRAGYAFWFYHQMK 674
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 2/221 (0%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+F + L+ L K GR + A + F + D P +YNIL+NG+ ++ NV
Sbjct: 888 DFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP--DYQCKPNCAIYNILINGFGKAGNVN 945
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + M KE + P++ +Y LVE RVD A+ +E++ G++P+ + YN +I
Sbjct: 946 IACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMI 1005
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+GL ++ R EE + P + TY +L+ + AG ++ A K+ + + G
Sbjct: 1006 NGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLE 1065
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
P+ TYN R SK G + A ++++KM+ G +P+ T+
Sbjct: 1066 PNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 170/367 (46%), Gaps = 16/367 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDK----IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF 56
+I+VL K K+ A L DK +G H P+ ++ L+ + EAA+ F
Sbjct: 758 LIRVLCKQKKALDAK-KLFDKFTKSLGTHPTPE-----SYNCLMDGLLGCNITEAALKLF 811
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
N N + + +LLD+ K R+ E +++ L + P + +NI++
Sbjct: 812 VEMKNAGCCPNIFT----YNLLLDAHGKSKRIDELFELYNEM--LCRGCKPNIITHNIII 865
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ +S ++ A + E+ + +P TYG L+ G + R + A+++ +EM +
Sbjct: 866 SALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCK 925
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN +YN +I+G +AG + +R + P + +YT LV+ G ++ A
Sbjct: 926 PNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHY 985
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ + G P +YN K ++E+A++L+ +M G +P+ TY+ L+
Sbjct: 986 FEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGN 1045
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+D A ++ +E++ G + ++ T LI + D A + F+ M+ G P+ T
Sbjct: 1046 AGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGT 1105
Query: 357 FKRLNDE 363
F +L ++
Sbjct: 1106 FAQLPNK 1112
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 6/321 (1%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+ +T++ + + + G + A + V N S L LL + G K A
Sbjct: 156 NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLL----QPGFCKEA 211
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ + ++ + + P+++ Y+ L+ R ++ EM + PN+ TY +
Sbjct: 212 LKVY--KRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICI 269
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
R R+D A ++K M EG P+ + Y +ID L AG+ ++ + +
Sbjct: 270 RVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHK 329
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VTY +L+ + GDLE + M + G+ P TY K GKV+ A ++
Sbjct: 330 PDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDM 389
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M G P+ TY+ L+ L +LD A+++ M+ G + + I +
Sbjct: 390 LDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGK 449
Query: 332 MYKFDEASAEFEDMIRRGLVP 352
+ ++A FE M +RG++P
Sbjct: 450 LGDPEKALDTFEKMKKRGIMP 470
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 174/413 (42%), Gaps = 47/413 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K +KA + D A LL + + PD + ++ LI +AG V+ A F
Sbjct: 513 MMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNS---LIDTLYKAGRVDEAWQMFGRLK 569
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L + + + IL+ L K+G++ A + F KE P +N LL+
Sbjct: 570 DLKLAPTVVT----YNILITGLGKEGKLLKALDLFGSMKE--SGCPPNTVTFNALLDCLC 623
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V A + + M N +P+V+TY T++ G + R A +M+K + P+ +
Sbjct: 624 KNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHV 682
Query: 181 VYNTVIDGLVEAGRFEEV----------SG----------MMERFLVCEPGPTMVTYT-- 218
T++ G+V+ GR E+ SG +ME L+ +++
Sbjct: 683 TLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEG 742
Query: 219 --------------SLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFG 263
L++ CK A K+ K S G P+P +YN
Sbjct: 743 LVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCN 802
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
E A+ L+ +M +G P+ TY++LL K ++D ++ EM CRGC ++ T
Sbjct: 803 ITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHN 862
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++I L + ++A + ++I P T+ L K G + A K+
Sbjct: 863 IIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKI 915
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY ++ K G + A L M GF+ + +YN + + G ++A+ +Y++M
Sbjct: 159 TYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRM 218
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I G P TY L+ L + + + +EM+ G ++ T T+ I +L R +
Sbjct: 219 ISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRI 278
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
D+A + M G P +T+ L D G A++L M + +L+
Sbjct: 279 DDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 188/384 (48%), Gaps = 22/384 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L K ++F+S LL + K G +S D F + I+ +A AG ++ A+ FE
Sbjct: 232 MLLILGKTRQFESMVALLQEMGKAG------TLSMDAFKVAIKSFAAAGEIKNAVGVFEL 285
Query: 59 ANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
M KN FD G F LL +L +G + A + F K + ++P +R Y L+
Sbjct: 286 -----MRKNGFDDGVESFNCLLVALANEGLGREARQVFDK---MLGQYSPDLRSYTALML 337
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
W ++N+ +A R W EM ++ + P+VV + T++EG R +R A+++ + M+ +G P
Sbjct: 338 AWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPP 397
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N Y +I + G+ + E P + TYT L+ GY A ++ + +L
Sbjct: 398 NVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVL 457
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M +G P TYN + + +DA +Y+KMI+ G P TY++++K
Sbjct: 458 EEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLG 517
Query: 298 DK-LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
D+ + V +EM RG D+++ T+ I R + +EA E+MI +G+ +
Sbjct: 518 DRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQID 577
Query: 357 FKRLNDEFKKRG----MTALAQKL 376
+ + K G + LAQK+
Sbjct: 578 CNKFAADLSKAGKLDMLYELAQKV 601
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 178/391 (45%), Gaps = 51/391 (13%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF LIR G + A+ F+ MV + F + L+ L
Sbjct: 139 GHQ-PD---TATFTTLIRGLCVEGKIGEALHLFD-----KMVGEGFQPNGVTYGTLIHGL 189
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G +AA R + ++ P V YN +++ F+ + V +A + EM + ++P
Sbjct: 190 CKVGNSRAAIRLL--RSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISP 247
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG----RFEEV 198
NV TY +++ G C+ L+ EM I PN +++ T++D L + G + V
Sbjct: 248 NVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVV 307
Query: 199 SGMMERFLVCEP---------------------------------GPTMVTYTSLVKGYC 225
M++R + EP P +++Y++L+ GYC
Sbjct: 308 DVMIQRGV--EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYC 365
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K ++ A + + M R +P+ TYN G++ DA+ L+ +M+ SG PD +
Sbjct: 366 KIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLV 425
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY ILL LCK LD A+ + K ++ D+ + ++I +CR+ + + A F +
Sbjct: 426 TYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSL 485
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+GL P T+ + + +G+ A A KL
Sbjct: 486 SSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 2/276 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F L+D+LCK+G V A + + + P V Y L++G + +A++ +
Sbjct: 286 IFTTLVDALCKEGMVTIAHDVVDVM--IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M ++ PNV++Y TL+ GYC+++R+D+A+ L +EM + + PN + YNT+I GL G
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + + + P +VTY L+ CK L+ A +LK + P +YN
Sbjct: 404 RLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYN 463
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ G++E A +L+ + G PD TY I++ LC + L A ++ +EM
Sbjct: 464 IVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTD 523
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
GC D T ++ R + A ++M+ RG
Sbjct: 524 GCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I+++S C RV K +L P + L+ G + +A + +
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQ--PDTATFTTLIRGLCVEGKIGEALHLFDK 169
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E PN VTYGTL+ G C++ AIRL++ M ++ EPN I YNT+ID L + +
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ 229
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY S++ G CK + + + ++ M+ +P+ +
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G V A ++ MI+ G PD +TY L+ C ++D A +V M +G
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C ++ + + LI+ C++ + D+A FE+M +R LVP+ +T+ L
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 152/329 (46%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E+ L+ + + +P+ V F L+ + GMV A +
Sbjct: 255 IIHGLCKFSEWKHVATLMNEMVDSKIMPNVV---IFTTLVDALCKEGMVTIAHDVVDVM- 310
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + + L+D C + + A + F + + AP V Y+ L+NG+
Sbjct: 311 ---IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM--VRKGCAPNVISYSTLINGYC 365
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + + A + EM + + PN+VTY TL+ G C + R+ AI L EM G P+ +
Sbjct: 366 KIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLV 425
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++D L + ++ M++ P + +Y ++ G C+ G+LE A + +
Sbjct: 426 TYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSL 485
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S+G P TY G + +A L+R+M G +PD TY+++ + + ++
Sbjct: 486 SSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNET 545
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
AIQ+ +EM RG D T T+++ +L
Sbjct: 546 LSAIQLLQEMLGRGFSADASTITLIVEML 574
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K S + ++ LCK K + ++ +D P V ++ L++ +
Sbjct: 241 IAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM--VDSKIMPNVVIFTTLVDALCKEG 298
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V A M + V P+VVTY L++G+C +D A ++ M ++G PN I Y+
Sbjct: 299 MVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYS 358
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T+I+G + R ++ + E E P +VTY +L+ G C G L A + M++
Sbjct: 359 TLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVAS 418
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TY Y K ++ AM + + + S PD +Y+I++ +C+ +L+ A
Sbjct: 419 GQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAA 478
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ + +G D+ T T++I+ LC EA+ F +M G P T+ +
Sbjct: 479 GDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRG 538
Query: 364 FKKRGMTALAQKLCNVM 380
F + T A +L M
Sbjct: 539 FLRNNETLSAIQLLQEM 555
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
L +K S K++D P+ V I++N + V ++ K
Sbjct: 81 LTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGH 140
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P+ T+ TL+ G C ++ A+ L +M EG +PN + Y T+I GL + G
Sbjct: 141 QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIR 200
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ + P ++TY +++ K + A I MI++G P+ +TYN
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
KF + + L +M++S P+ + + L+ LCKE + +A V M RG + D+
Sbjct: 261 KFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVV 320
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
T T L+ C + DEA F+ M+R+G P+ +++ L + + K
Sbjct: 321 TYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCK 366
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+VV + ++ ++ + L K+M GI + VI+ R + +
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + P T+T+L++G C G + A + M+ GF P+ TY K
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G A+ L R M++ P+ +TY+ ++ L K+ +++ A+ + EM +G ++ T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+IH LC+ ++ + +M+ ++P+ + F L D K GM +A + +VM
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM- 310
Query: 382 SVPRSME--------LLDSRC 394
+ R +E L+D C
Sbjct: 311 -IQRGVEPDVVTYTALMDGHC 330
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 111/250 (44%), Gaps = 9/250 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ +S T LI Y + ++ A++ FE ++V N + + L+ LC GR
Sbjct: 352 PNVISYST---LINGYCKIQRIDKAMYLFEEMCQRELVPNIVT----YNTLIHGLCHVGR 404
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A FH+ Q P + Y ILL+ +++++ A + N+ P++ +Y
Sbjct: 405 LRDAIALFHEMVASGQ--IPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+++G CR+ ++ A L + +G+ P+ Y +I+GL G E + +
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P TY + +G+ + + A ++L+ M+ RGF +T S G +
Sbjct: 523 DGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQS 582
Query: 268 AMNLYRKMIE 277
+ + ++
Sbjct: 583 VKQILHEFVQ 592
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 1/174 (0%)
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E R L +P P++V + ++ + K M S G T
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F +V+ ++ K+ + G+ PD T+ L++ LC E K+ A+ + +M G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND-EFKKR 367
+ T LIH LC++ A M+++ P+ +T+ + D FK R
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDR 228
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 177/350 (50%), Gaps = 9/350 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ V+ +T +I Y + + A F F ++ + K + F ++++ LC+ G
Sbjct: 15 LPNVVTYNT---MIDGYCKLKRTDEA---FGFLRSMGL-KGLEPNLITFNMIINGLCRDG 67
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R+K SE + + + P YN L+NG+ + N A EM + ++PNVVT
Sbjct: 68 RLKETSEVLVEMSR--KGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +L+ C+ ++RA+ +M G+ PN Y T+I+G + G +E ++
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P++VTY +L+ G+C G +E A +L+ M+ +G LP +Y+ F++ +++
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + +MI PD +TY L++ LC++ +L A + +EM D T T LI
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ C+ ++A ++MI++G +P +T+ L + K+ + A++L
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 64/417 (15%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQ 85
VPD V+ +T L+ Y + G A+ + +MV+N + L++S+CK
Sbjct: 85 VPDEVTYNT---LVNGYCKEGNFHQALVL-----HAEMVRNGLSPNVVTYTSLINSMCKA 136
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G + A E+F + + P R Y ++NG+ + + +A R EM + P++V
Sbjct: 137 GNLNRAMEFFDQMHV--RGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN--------------------------- 178
TY L+ G+C L R++ AI L+++M +G+ P+
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254
Query: 179 --------AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
A+ Y+++I GL E R E M + L + P TYT+L+ YCK GDL
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A + MI +GFLP TYN +K + ++A L K+ P +TY+ L
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL 374
Query: 291 L---------------KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ K C + +D A QV + M + + ++IH CR+
Sbjct: 375 IENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNV 434
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+A +++M+ VPH +T L GM +L V+ + RS +L D+
Sbjct: 435 LKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDG---ELNEVIGDILRSCKLTDA 488
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 122/238 (51%)
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
RF+ EM + PNVVTY T+++GYC+L+R D A ++ M +G+EPN I +N +I+GL
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
GR +E S ++ P VTY +LV GYCK G+ A + M+ G P+
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY K G + AM + +M G P+ TY ++ ++ LD A +V E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M G + T LI+ C + + +EA +DM+ +G++P +++ + F +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 36/306 (11%)
Query: 99 KELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
KE++++ P V YN +++G+ + K +A F M + + PN++T+ ++ G CR
Sbjct: 7 KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
R+ ++ EM ++G P+ + YNT+++G + G F + + + P +VTY
Sbjct: 67 GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTY 126
Query: 218 TSLVKGYCKAGD-----------------------------------LEGASKILKMMIS 242
TSL+ CKAG+ L+ A ++L M
Sbjct: 127 TSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTR 186
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
GF+PS TYN G++E+A+ L + M+ G PD ++Y ++ + +LD
Sbjct: 187 SGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDR 246
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A Q+ EM + D T + LI LC + EA F++M+ L P T+ L +
Sbjct: 247 AFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLIN 306
Query: 363 EFKKRG 368
+ K G
Sbjct: 307 AYCKEG 312
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+R KEM + G PN + YNT+IDG + R +E G + + P ++T+ ++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G C+ G L+ S++L M +G++P TYN + K G A+ L+ +M+ +G +P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY L+ +CK L+ A++ +M RG + T T +I+ + DEA
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 343 EDMIRRGLVPHYLTFKRL 360
+M R G +P +T+ L
Sbjct: 182 NEMTRSGFIPSIVTYNAL 199
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VTY +++ GYCK + A L+ M +G P+ T+N + G++++ +
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+M GY PD +TY+ L+ CKE A+ + EM G ++ T T LI+ +C+
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ A F+ M RGL P+ T+ + + F ++G+ A ++ N M+
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ K M G LP+ TYN + K + ++A R M G P+ +T+++++ L
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C++ +L +V EM +G D T L++ C+ F +A +M+R GL P+
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+T+ T+L +C ++ R+ME D
Sbjct: 124 VTY------------TSLINSMCKA-GNLNRAMEFFDQ 148
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
+ +++M +G P+ +TY+ ++ CK + D A + M +G + +L T M+I+
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG-----MTALAQKLCNVMS- 381
LCR + E S +M R+G VP +T+ L + + K G + A+ + N +S
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 382 SVPRSMELLDSRCK 395
+V L++S CK
Sbjct: 122 NVVTYTSLINSMCK 135
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 178/372 (47%), Gaps = 20/372 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCKQGRVKA 90
TF I IR RAG ++ A +E +D D G + +L+D+LC G+++
Sbjct: 264 TFTICIRVLGRAGKIDEA---YEIFRRMD-----DEGCGPDLVTYTVLIDALCNAGQLEN 315
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E F K K P +Y LL+ + ++ + FW +M + P+VVT+ L
Sbjct: 316 AKELFVKMKA--NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTIL 373
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
V+ C+ R D A MRK+GI PN YNT+I GL+ AGR E+ +++
Sbjct: 374 VDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGV 433
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT TY + + + K+G+ A + + M ++G +P+ N ++ G++ +A
Sbjct: 434 QPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ + E+G PD +TY++++K K ++D A+ + EM GC+ D+ LI L
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRSM 387
+ + DEA F+ M L P +T+ L K G A +L M P ++
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTI 613
Query: 388 E---LLDSRCKD 396
LLD CK+
Sbjct: 614 SFNTLLDCFCKN 625
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 155/311 (49%), Gaps = 9/311 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ VL KA++FD A+ +P+ T+ LI RAG +E A+ +
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNL---HTYNTLICGLLRAGRIEDALKLLDTME 429
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + A + +D K G A E F K K + P + N L
Sbjct: 430 SVGV----QPTAYTYITFIDYFGKSGETGKAVETFEKMKA--KGIVPNIVACNASLYSLA 483
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++A+ + +R+ + P+ VTY +++ Y ++ +VD A+ L+ EM + G EP+ I
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
V N++ID L +AGR +E M +R + PT+VTY +L+ G K G ++ A ++ + M
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I + P+ ++N F K +VE A+ ++ KM PD LTY+ ++ L KE+K+
Sbjct: 604 IXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663
Query: 301 DLAIQVSKEMK 311
+ A ++K
Sbjct: 664 NHAFWFFHQLK 674
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 3/300 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ LCK R A + F K K+L S PT+ YN L+ + A + +M+
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGIS--PTLASYNCLIGELLEVHYTEKAWDLFKDMK 815
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
P+ T+ L+ + + ++ L KEM +P+AI YN VI L ++ +
Sbjct: 816 NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLD 875
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + PT TY L+ G K G LE A ++ + M G P+ +N
Sbjct: 876 KALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILI 935
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ K G E A L+++M+ G PD +Y IL+ LC ++D A+ E+K G D
Sbjct: 936 NGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLD 995
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D +I+ L + + +EA A + +M RG+VP T+ L GM A+++
Sbjct: 996 PDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRM 1055
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 172/423 (40%), Gaps = 76/423 (17%)
Query: 2 IKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA------- 52
I+VL +A + D A+ + +D G PD V T+ +LI AG +E A
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCG--PDLV---TYTVLIDALCNAGQLENAKELFVKM 323
Query: 53 ---------------IWTFEFANNLDMVKNFDS---------GASLFEILLDSLCKQGRV 88
+ F +LD K F S F IL+D LCK
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A F ++ Q P + YN L+ G R+ ++DA + M V P TY
Sbjct: 384 DEAFATFDVMRK--QGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYI 441
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T ++ + + +A+ ++M+ +GI PN + N + L E GR E M
Sbjct: 442 TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP--------------------- 247
P VTY ++K Y K G ++ A +L MI G P
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Query: 248 ------------SPT--TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
SPT TYN K G+V+ A+ L+ MI +P+ ++++ LL
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDC 621
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
CK D+++LA+++ +M C D+ T +I+ L + K + A F + ++ + P
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPD 680
Query: 354 YLT 356
++T
Sbjct: 681 HVT 683
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAER 130
A F +LL K G++ +E F KE+ + P YNI+++ +S N+ A
Sbjct: 823 AFTFNMLLAVHGKSGKI---TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ ++ + P TYG L++G ++ R++ A+RL +EM G +PN ++N +I+G
Sbjct: 880 FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G E + +R + P + +YT LV C AG ++ A + S G P
Sbjct: 940 KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
YN K ++E+A+ LY +M G PD TY+ L+ L ++ A ++ +E+
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ G + D+ T LI + A +++M+ G P+ T+ +L ++
Sbjct: 1060 QLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQ 1112
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP +N+LL +S + + + EM P+ +TY ++ + +D+A+
Sbjct: 820 APDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ P Y +IDGL + GR EE + E P + L+ GY
Sbjct: 880 FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K GD E A ++ K M++ G P +Y G+V++A+ + ++ +G PD +
Sbjct: 940 KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
Y+ ++ L K +++ A+ + EM+ RG DL T L+ L ++A +E++
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059
Query: 346 IRRGLVPHYLTFKRL 360
GL P T+ L
Sbjct: 1060 QLAGLEPDVFTYNAL 1074
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 142/340 (41%), Gaps = 41/340 (12%)
Query: 49 VEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT 108
VE FEF + ++ D+ ++F+ +L +G ++ + +K ++ +
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFK----ALSIRGGLRQMTTVLNKMRK--AGFVLN 191
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
YN L++ +S +A + M E + P++ TY L+ + R + + L+K
Sbjct: 192 AYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLK 251
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
EM G+ PN + I L AG+ +E + R GP +VTYT L+ C AG
Sbjct: 252 EMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAG 311
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
LE A ++ M + G P Y F+ FG ++ + +M GY PD +T+
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA---------- 338
IL+ +LCK D A M+ +G +L T LI L R + ++A
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431
Query: 339 ------------------SAE-------FEDMIRRGLVPH 353
S E FE M +G+VP+
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 117/245 (47%)
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+K ++P + +Y L+ + ++A L K+M+ G P+A +N ++ ++G+
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
E+ + + + P +TY ++ K+ +L+ A ++S F P+P TY
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+K G++E+AM L+ +M + G P+ ++IL+ K + A Q+ K M G
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
DL + T+L+ LC + DEA F ++ GL P ++ + R+ + K A
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 376 LCNVM 380
L N M
Sbjct: 1020 LYNEM 1024
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 36/328 (10%)
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A YF+ E + T N +L V+D + M+K+ + ++ TY T+
Sbjct: 105 ALSYFYSISEF-PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTI 163
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ + + ++ +MRK G NA YN +I L+++G E + R +
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P++ TY++L+ K D E +LK M G P+ T+ R + GK+++A
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID------------ 318
++R+M + G PD +TY +L+ LC +L+ A ++ +MK G D
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343
Query: 319 ----LDTS-------------------TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
LDT T+L+ +LC+ FDEA A F+ M ++G++P+
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
T+ L + G A KL + M SV
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLDTMESV 431
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 173/421 (41%), Gaps = 53/421 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K +K + D A LL + I PD + ++ LI +AG V+ A F+
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS---LIDSLYKAGRVDEAWQMFDRMK 569
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + + + LL L K+GRV+ A E F + + +P +N LL+ +
Sbjct: 570 DMKLSPTVVT----YNTLLSGLGKEGRVQKAIELFESM--IXKKCSPNTISFNTLLDCFC 623
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V+ A + + +M + P+V+TY T++ G + +V+ A +++K + P+ +
Sbjct: 624 KNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHV 682
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL---------------------------------- 206
T++ GLV+ G+ + + F+
Sbjct: 683 TICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEE 742
Query: 207 -----VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR-GFLPSPTTYNYFFRYFS 260
+C ++ LV+ CK A +I + G P+ +YN
Sbjct: 743 LVLNGICREDSFLI---PLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELL 799
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ E A +L++ M G PD T+++LL + K K+ ++ KEM R C D
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI 859
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T ++I L + D+A F D++ P T+ L D K G A +L M
Sbjct: 860 TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919
Query: 381 S 381
S
Sbjct: 920 S 920
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 179/377 (47%), Gaps = 38/377 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF--- 56
+I +LAK FD+ W +L + K ++P TF +LI YA++GM E A+ +F
Sbjct: 102 VIDMLAKDDGFDTYWKILEELKNSNIQIP----PPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 57 -EFANNLD----------MVK-----------------NFDSGASLFEILLDSLCKQGRV 88
+F D MV+ N++ + F ILL+ LCK G+
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A + F + + + P +Y I+L+G ++K D R M+ P+ +T
Sbjct: 218 DDALKMFDEMTQ--KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCN 275
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L++G+C+L ++D A L++ KEG Y+++IDGL A R++EV +
Sbjct: 276 ALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA 335
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P +V YT L++G+C+ G ++ A +L M RG P YN + F G ++ A
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA 395
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+L ++ ++ P TY IL+ +C+ LD A Q+ +M+ GC + T LI
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 329 LCRMYKFDEASAEFEDM 345
LC+ + +EA F M
Sbjct: 456 LCKAGELEEARHLFYKM 472
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 145/345 (42%), Gaps = 37/345 (10%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N F +L+ + K G + A E F K K D P V YN +L+ + +
Sbjct: 126 NIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK--DFGCKPDVFTYNSILHVMVQKEVFL 183
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + +M K N PN T+ L+ G C+ + D A+++ EM ++GI PN ++Y ++
Sbjct: 184 LALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM------- 239
GL +A R ++V ++ V P +T +L+ G+CK G ++ A +L++
Sbjct: 244 SGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303
Query: 240 ----------------------------MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
M G P Y R F + G V+ A+N+
Sbjct: 304 LGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNM 363
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M + G +PD Y+ L+K C LD A + E+ C T T+LI +CR
Sbjct: 364 LNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCR 423
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DEA F M G P +TF L D K G A+ L
Sbjct: 424 NGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHL 468
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 130/309 (42%), Gaps = 6/309 (1%)
Query: 76 EILLDSLCKQGRVKAASEYF--HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
EI+ D + +Q R + +F R+ +SW +N++++ + +
Sbjct: 65 EIVNDVMREQRRPELGFRFFIWTTRRRSFRSWV----THNLVIDMLAKDDGFDTYWKILE 120
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E++ N+ T+ L+ Y + ++A+ +M+ G +P+ YN+++ +V+
Sbjct: 121 ELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKE 180
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F + + L P T+ L+ G CK G + A K+ M +G P+ Y
Sbjct: 181 VFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYT 240
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + +D L M SG PD +T + LL CK ++D A + + +
Sbjct: 241 IILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKE 300
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + + + LI L R ++DE M + G+ P + + L F + GM A
Sbjct: 301 GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYA 360
Query: 374 QKLCNVMSS 382
+ N M+
Sbjct: 361 LNMLNDMTQ 369
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 128/321 (39%), Gaps = 47/321 (14%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ IL+ C+ G V A + + + +P YN L+ G+ + A L
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQ--RGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ K + P TY L+ G CR +D A ++ +M G P+ + +N +IDGL +AG
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460
Query: 194 RFEEVSGMMER---------FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
EE + + FL G V T+ G+ + E A ++L M+ G
Sbjct: 461 ELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTA--NGFHRVDREEDAFRVLDQMVKNG 518
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT------------------ 286
PS Y + + GK+ A +L+ K + S + + T
Sbjct: 519 CTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVR 578
Query: 287 ----------------YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
Y I L LC+ + + A+++ +K D++ + MLI+ LC
Sbjct: 579 CLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLC 638
Query: 331 RMYKFDEASAEFEDMIRRGLV 351
+ + A F + +G +
Sbjct: 639 KDGNLEMAVDIFLYTLEKGFM 659
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F + T+ ILI R G+++ A F NL + + F L+D LCK G ++
Sbjct: 408 FPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMT----FNALIDGLCKAGELE 463
Query: 90 AASEYFHKRKELDQSWAPTVRVYN------ILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
A F+K E+ ++ + +R+ NG+ R +DA R +M K TP+
Sbjct: 464 EARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPS 522
Query: 144 VVTYGTLVEGYCR--------------LRRV----DRAIRLVKEMRKEGIEPNAI----- 180
Y L+ CR LR + D ++L +E ++G A+
Sbjct: 523 SAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLE 582
Query: 181 -----------VYNTVIDGLVEAGRFEEVSGMMERFLV---CEPGPTMVTYTSLVKGYCK 226
Y + GL +A R EE ++ FLV C+ + L+ G CK
Sbjct: 583 MNFKLNNFEIAPYTIWLIGLCQARRSEEA---LKIFLVLKECQMDVNPPSCVMLINGLCK 639
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+LE A I + +GF+ P N R K++ A++L +M +GY D
Sbjct: 640 DGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYL 699
Query: 287 YH 288
+H
Sbjct: 700 HH 701
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 143/398 (35%), Gaps = 93/398 (23%)
Query: 1 MIKVLAKAKEFDSA--WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L +AK +D WC + K G PD V + ILIR + GMV+ A+
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIE--PDVV---LYTILIRGFCEVGMVDYALNMLN- 365
Query: 59 ANNLDMV-KNFDSGASLFEILLDSLCKQGRV-KAASEYFHKRKELDQSWAPTVRVYNILL 116
DM + + L+ C G + KA S K PT Y IL+
Sbjct: 366 ----DMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK---NDCFPTSCTYTILI 418
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR-------------------- 156
G R+ + +A + + +M +P+++T+ L++G C+
Sbjct: 419 CGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNP 478
Query: 157 -------------------LRRVDR---AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
RVDR A R++ +M K G P++ VY ++ G+
Sbjct: 479 SLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGK 538
Query: 195 FEEVSGMMERFLVCEPGPT----------------------------------MVTYTSL 220
+ ++L P + YT
Sbjct: 539 LSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIW 598
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G C+A E A KI ++ +P + K G +E A++++ +E G+
Sbjct: 599 LIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGF 658
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ LL+ L +DK+ A+ + M G D+D
Sbjct: 659 MLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLD 696
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 187/381 (49%), Gaps = 14/381 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K ++ D W D + V+ DT IRR A A AI F+
Sbjct: 128 MVDLLGKMRQIDRMW----DLLSEMHCRGLVTVDTIAKSIRRLAAARRWRDAILLFDQLE 183
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L + +N ++ +LLD+LCK+ +V+ A E F L AP +NI ++GW
Sbjct: 184 DLGLERNTET----MNVLLDALCKERKVELAREVFVM---LSPHIAPDAYTFNIFVHGWC 236
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A EM+ P V+TY ++E YC+ R R ++ M +G PN I
Sbjct: 237 SVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVI 296
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++ L + RFEE + +R P + Y +L+ +AG L A+++ ++
Sbjct: 297 TYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVE 356
Query: 241 ISRGFLP-SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ R +P + TYN ++G+ +DA+++ ++M PD TY LL++L
Sbjct: 357 MPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRG 416
Query: 300 LDLAI-QVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
AI + E++ R G +DLDT T+LIH LCR+ + D A +++M+ +VP T
Sbjct: 417 QTGAIHHLLSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKTC 476
Query: 358 KRLNDEFKKRGMTALAQKLCN 378
+ L E +++ M +++ N
Sbjct: 477 ELLLSETQRQNMEVYVERIQN 497
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 97/258 (37%), Gaps = 39/258 (15%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE----------------- 173
W + R + +V+ ++R++DR L+ EM
Sbjct: 109 LWAQSRGGGYSHTPCACNRMVDLLGKMRQIDRMWDLLSEMHCRGLVTVDTIAKSIRRLAA 168
Query: 174 -----------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP--GPTM 214
G+E N N ++D L + + E E F++ P P
Sbjct: 169 ARRWRDAILLFDQLEDLGLERNTETMNVLLDALCKERKVELAR---EVFVMLSPHIAPDA 225
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T+ V G+C ++ A ++ M +RGF P TY + K +
Sbjct: 226 YTFNIFVHGWCSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDS 285
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G P+ +TY +++ L K ++ + A+ VS MK GC D LI+LL R
Sbjct: 286 MSSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGH 345
Query: 335 FDEASAEFEDMIRRGLVP 352
EA+ F + R +VP
Sbjct: 346 LFEANQVFRVEMPRNVVP 363
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L+ ++ + G + T ++LL LCKE K++LA +V M D T + +H C
Sbjct: 178 LFDQLEDLGLERNTETMNVLLDALCKERKVELAREVFV-MLSPHIAPDAYTFNIFVHGWC 236
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + DEA E+M RG P +T+ + + + K+ ++ + MSS
Sbjct: 237 SVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSS 288
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 171/345 (49%), Gaps = 12/345 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F I+I+ AG +E + F+ L F ++ L+D CK+G ++ A +
Sbjct: 165 SFGIVIKGCCEAGEIEKS---FDLLVELREF-GFSPNVVIYTTLIDGCCKRGEIEKAKDL 220
Query: 95 FHKRKELD---QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
F + + W Y +L++G F++ K + +M+++ V PN+ TY ++
Sbjct: 221 FFEMGKFGLVANEWT-----YTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+C+ R A +L EMR+ G+ N + YNT+I GL + E + +M++
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P ++TY +L+ G+C G L A + + + SRG PS TYN F K G A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++M E G P ++TY IL+ + D ++ AIQ+ M+ G D+ T ++LIH C
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ +EAS F+ M+ + L P+ + + + + K G + A +L
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRL 500
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 160/322 (49%), Gaps = 14/322 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G+ + +E + N + + +++ CK GR K A +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYT----YNCVMNQHCKDGRTKDAFKL 290
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + + + YN L+ G R +A + +M+ + + PN++TY TL++G+
Sbjct: 291 FDEMRE--RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF 348
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGRFEEVSGMMERFLVCEP 210
C + ++ +A+ L ++++ G+ P+ + YN ++ G + +G + V M ER +
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI---- 404
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P+ +TYT L+ + + ++E A ++ M G P TY+ F G++ +A
Sbjct: 405 KPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L++ M+ P+++ Y+ ++ CKE A+++ +EM+ + ++ + +I +LC
Sbjct: 465 LFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524
Query: 331 RMYKFDEASAEFEDMIRRGLVP 352
+ K EA E MI G+ P
Sbjct: 525 KERKSKEAEGLVEKMIDTGIDP 546
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 2/298 (0%)
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
Q + +S H E + S + R+Y +++N + +S+++ + ++ EM + P
Sbjct: 71 QSQFFTSSSLLHYVTESETSETKS-RLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGS 129
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+ L+ ++ R E K ++ + + VI G EAG E+ ++
Sbjct: 130 NCFNNLLTFVVGSSSFNQWWRFFNE-SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVE 188
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
P +V YT+L+ G CK G++E A + M G + + TY K G
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+ +Y KM E G P+ TY+ ++ CK+ + A ++ EM+ RG ++ T
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNT 308
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI LCR K +EA+ + M G+ P+ +T+ L D F G A LC + S
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
SK T+ ILI +AR +E AI L + + + + +L+ C +G++ A
Sbjct: 407 SKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHT----YSVLIHGFCIKGQMNEA 462
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
S F + + + P +YN ++ G+ + + A R + EM ++ + PNV +Y ++
Sbjct: 463 SRLF--KLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
E C+ R+ A LV++M GI+P+ + N +
Sbjct: 521 EVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ ++ V I R + + E +N + + ++DSLC+ G
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKME-------ERNVKADVFTYSTIIDSLCRDGC 233
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ AA F KE++ + +V YN L+ G ++ D +M + PNV+T
Sbjct: 234 IDAAISLF---KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A L KEM GI PN I YNT++DG R E + M++ +
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +VT+TSL+KGYC ++ K+ + + RG + + TY+ + F + GK++
Sbjct: 351 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 410
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L+++M+ G PD +TY ILL LC KL+ A+++ ++++ D+ + T +I
Sbjct: 411 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 470
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++A F + +G+ P+ +T+ + K+G + A L
Sbjct: 471 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 520
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 180/391 (46%), Gaps = 15/391 (3%)
Query: 12 DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
D A L + I +P V F I R + +V +F L++
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV------LDFCKQLEL-NGIAHN 112
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
I+++ C+ + A K +L + P +N L+ G F V +A
Sbjct: 113 IYTLNIMINCFCRCCKTCFAYSVLGKVMKL--GYEPDTTTFNTLIKGLFLEGKVSEAVVL 170
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + P+VVTY ++V G CR A+ L+++M + ++ + Y+T+ID L
Sbjct: 171 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 230
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + + ++VTY SLV+G CKAG + +LK M+SR +P+ T
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N F K GK+++A LY++MI G +P+ +TY+ L+ C +++L A + M
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
C D+ T T LI C + + D+ F ++ +RGLV + +T+ L F + G
Sbjct: 351 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 410
Query: 372 LAQKLCNVMSS---VPRSME---LLDSRCKD 396
LA++L M S +P M LLD C +
Sbjct: 411 LAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 14/352 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I R G ++AAI F+ K S + L+ LCK G+ +
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEME----TKGIKSSVVTYNSLVRGLCKAGKWNDGALL 275
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P V +N+LL+ + + +++A + EM ++PN++TY TL++GY
Sbjct: 276 L--KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 333
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEP 210
C R+ A ++ M + P+ + + ++I G R ++ + +R LV
Sbjct: 334 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV--- 390
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
VTY+ LV+G+C++G ++ A ++ + M+S G LP TY GK+E A+
Sbjct: 391 -ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 449
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ + +S + Y +++ +CK K++ A + + C+G ++ T T++I LC
Sbjct: 450 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 509
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ EA+ M G P+ T+ L + G + KL M S
Sbjct: 510 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L KA +++ LL D + VP+ + TF +L+ + + G ++ A ++
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVI---TFNVLLDVFVKEGKLQEANELYKEM- 314
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D C Q R+ A+ + +P + + L+ G+
Sbjct: 315 ---ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--VRNKCSPDIVTFTSLIKGYC 369
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V D + + + K + N VTY LV+G+C+ ++ A L +EM G+ P+ +
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G+ E+ + E + +V YT++++G CK G +E A + +
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY K G + +A L RKM E G P+ TY+ L++ ++ L
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +EMK G D + M+I +L
Sbjct: 550 TASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
R V AE EM + + PN +TY +L++G+C+ R+D A +++ M +G
Sbjct: 711 RKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 156 RLRRVDRAIRLV------KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
R+RR R + +V KEM + GI PN I Y+++IDG + R +E + M++ L+
Sbjct: 705 RMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLD--LMVT 762
Query: 210 PGPTMVTY--TSLVKGYCKAGDLEG 232
G + + Y L++ K + EG
Sbjct: 763 KGDSDIRYLLAGLMRKKRKGSETEG 787
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V A L+++MI+ G P+ +TY L+ CKE++LD A Q+ M +G D D +
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG---DSDIRYL 771
Query: 325 LIHLLCRMYKFDEA 338
L L+ + K E
Sbjct: 772 LAGLMRKKRKGSET 785
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 171/349 (48%), Gaps = 19/349 (5%)
Query: 35 TFVILIRRYARAGMVE------AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
+F L+ R G VE AA+W + F+ LD + +++ SLC++GR
Sbjct: 175 SFRALVVVCCREGKVEEVDALLAAMWRYGFS--LD--------NATCTVVVRSLCEKGRF 224
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
K SE+F R+ L+ P V Y ++G + + VK A EM + PNV T+
Sbjct: 225 KDVSEFF--RRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 282
Query: 149 TLVEGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++G C++ +RA RL +K ++ +PN Y +I G G+ ++ R +
Sbjct: 283 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 342
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P TYT+L+ G+CK G + A +++ M GFLP+ TYN F K GK+++
Sbjct: 343 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 402
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A + R G D++TY IL+ CK+ + A+ + M GC D++ T LI
Sbjct: 403 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 462
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ + +E+ F+ + GL+P T+ + + K G + +A ++
Sbjct: 463 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRV 511
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+D LCK G + A F K + S+ P V Y +++ G+ R + AE + M +
Sbjct: 284 LIDGLCKIGWTERAFRLFLKLIK-SSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 342
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + PN TY TL+ G+C+ DRA L+ +M++EG PN YN VIDG + G+ +E
Sbjct: 343 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 402
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++ +TYT L+ +CK G + A + M+ G P Y
Sbjct: 403 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 462
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ + ++E++ + K + G P + TY ++ CK + +A++V + M GC
Sbjct: 463 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFA 522
Query: 318 D 318
D
Sbjct: 523 D 523
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V N +L + + A + + M + V P+ ++ LV CR +V+ L+
Sbjct: 138 VETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLA 197
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
M + G + V+ L E GRF++VS R L P +V YT+ + G CK
Sbjct: 198 AMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRR 257
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTY 287
++ A +L+ M+ RG P+ T+ K G E A L+ K+I+ S Y P+ TY
Sbjct: 258 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTY 317
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+++ C+E KL A + M +G + +T T LI C+ FD A M +
Sbjct: 318 TVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQ 377
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G +P+ T+ + D F K+G A K+ + +S
Sbjct: 378 EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 412
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 127/286 (44%), Gaps = 12/286 (4%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I L K + A+ +L + +G P+ + T LI + G E A F
Sbjct: 250 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT---LIDGLCKIGWTERAFRLF----- 301
Query: 62 LDMVKN--FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L ++K+ + + +++ C++G++ A + ++Q P Y L+ G
Sbjct: 302 LKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLL--VRMVEQGLKPNTNTYTTLIGGH 359
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + A +M++E PN+ TY +++G+C+ ++ A ++++ +G++ +
Sbjct: 360 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 419
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y +I + G + +R + P + YTSL+ YC+ +E + K
Sbjct: 420 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 479
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ G LP+ TY + K G+ A+ ++ +M+++G D +
Sbjct: 480 CLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSI 525
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 46/311 (14%)
Query: 75 FEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
F L+ C++G+V+ + + LD + TV V ++ G F KD
Sbjct: 176 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC-TVVVRSLCEKGRF-----KDVSE 229
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ M + PNVV Y ++G C+ R V +A +++EM G++PN VY
Sbjct: 230 FFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN--VY-------- 279
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-LKMMISRGFLPSP 249
T+T+L+ G CK G E A ++ LK++ S + P+
Sbjct: 280 -------------------------THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNV 314
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY + + GK+ A L +M+E G P+ TY L+ CK D A ++ +
Sbjct: 315 HTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 374
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
MK G ++ T +I C+ K EA +GL +T+ L E K+G
Sbjct: 375 MKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH 434
Query: 370 TALAQKLCNVM 380
A L + M
Sbjct: 435 ITYALDLFDRM 445
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 85/230 (36%), Gaps = 41/230 (17%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF---EEVSGMMERFL 206
+V + R+ A +V EMR G+ N V+ +E G F +V M R
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
VC P ++ +LV C+ G +E +L M GF T R + G+ +
Sbjct: 169 VC---PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFK 225
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D +R+M+E G P+ + Y + LCK + A V
Sbjct: 226 DVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHV-------------------- 265
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
E+M+ RGL P+ T L D K G T A +L
Sbjct: 266 ---------------LEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 300
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+V + +AG L A+ ++ M S G T N+ R + G A ++ M +
Sbjct: 108 GMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRA 167
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD ++ L+ + C+E K++ + M G +D T T+++ LC +F +
Sbjct: 168 GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 227
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
S F M+ G P+ + + D KR
Sbjct: 228 SEFFRRMLEMGTPPNVVNYTAWIDGLCKR 256
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I + + G ++ A A + + FD + IL+ CKQG + A +
Sbjct: 386 TYNAVIDGFCKKGKIQEAYKVLRMATSQGL--KFDK--ITYTILITEHCKQGHITYALDL 441
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + ++ P + Y L++ + + + ++++++F+ + + P TY +++ GY
Sbjct: 442 FDRM--VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGY 499
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIV 181
C++ R A+R+ + M + G ++I+
Sbjct: 500 CKVGRSTMALRVFERMVQNGCFADSIL 526
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 186/384 (48%), Gaps = 12/384 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ V A+ K A LL +++ +PD +T+ +LI Y A E A FA
Sbjct: 65 LLDVFARTKRHREAGNLLKNELATTFLPDV---ETWNVLITGYCLAREPEEA-----FAV 116
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+M +++ SL ++L LCK G+V AA ++F + Y +++
Sbjct: 117 IREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT--NGCTIDIHTYTAIVDW 174
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++K ++DA ++ TP + TY L+ G C++ R++ AI L++++ G P+
Sbjct: 175 LAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 234
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y ++IDGL + R E + + + V YT+L++G +AG + AS + K
Sbjct: 235 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYK 294
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M S+G +P T + K G++ A+ +++ M G P+ + Y L+ LCK
Sbjct: 295 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 354
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K+D A+++ +MK C D T +LI LC+ + A A F++M+ G P T+
Sbjct: 355 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 414
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
L F K G T A + + MSS
Sbjct: 415 ILVSGFCKAGNTDAACGVFDDMSS 438
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 139/296 (46%), Gaps = 2/296 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ + LL+ LCK GR++ A + RK +D P V Y L++G + K +A + +
Sbjct: 201 ATYNALLNGLCKMGRLEEAIDLL--RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 258
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + + V Y L+ G + ++ +A + K M +G P+ + +T+IDGL +A
Sbjct: 259 KEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR + + P V Y++L+ G CKA ++ A ++L M P TY
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N K G VE A + +M+E+G PD TY+IL+ CK D A V +M
Sbjct: 379 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSS 438
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C ++ T LI LC+ + +AS F+ M RG P + L D K G
Sbjct: 439 SHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 164/352 (46%), Gaps = 19/352 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
LAK K+ A L++KI + ++ T+ L+ + G +E AI D+
Sbjct: 175 LAKNKKIQDAV-ALMEKITANGCTPTIA--TYNALLNGLCKMGRLEEAI---------DL 222
Query: 65 VKNF-DSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
++ D+G + + L+D L K+ R A + F K L TV Y L+ G
Sbjct: 223 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF-KEMALRGLVLDTV-CYTALIRGL 280
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ + A + M + P+VVT T+++G C+ R+ A+R+ K M G+ PN
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 340
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+VY+ +I GL +A + + M+ + P +TY L+ G CK+GD+E A
Sbjct: 341 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G P TYN F K G + A ++ M S +P+ +TY L+ LCK +
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQ 460
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
L A + MK RGC D + L+ LC+ K + F++M R G+
Sbjct: 461 LTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 512
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 4/286 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ L + G++ AS + + Q P V + +++G ++ + A R +
Sbjct: 273 YTALIRGLLQAGKIPQASSVY--KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS 330
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN V Y L+ G C+ R++D A+ ++ +M+K P+ I YN +IDGL ++G
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + L P + TY LV G+CKAG+ + A + M S P+ TY
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGT 450
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++ A ++ M E G PD Y L+ LCK KL+ + EM+ R
Sbjct: 451 LISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME-RS 509
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T T LI LC+ + DEA + F + IR+ +PH + +
Sbjct: 510 GVANSQTRTRLIFHLCKANRVDEAVSLF-NAIRKEGMPHPYAYNSI 554
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 148/304 (48%), Gaps = 20/304 (6%)
Query: 90 AASEYFHKRKELDQSW-------AP------TVRVYNILLNGWFRSKNVKDAERFWLEMR 136
A + F K+ D +W +P +V N LL+ + R+K ++A
Sbjct: 27 AVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNEL 86
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRF 195
P+V T+ L+ GYC R + A +++EM ++ G+ P+ +N V+ GL ++G+
Sbjct: 87 ATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK- 145
Query: 196 EEVSGMMERFLVCEPGPTMV---TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
V M+ F + TYT++V K ++ A +++ + + G P+ TY
Sbjct: 146 --VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATY 203
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N K G++E+A++L RK++++G TPD +TY L+ L KE + A ++ KEM
Sbjct: 204 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 263
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
RG +D T LI L + K +AS+ ++ M +G VP +T + D K G
Sbjct: 264 RGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGA 323
Query: 373 AQKL 376
A ++
Sbjct: 324 AVRI 327
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 191/422 (45%), Gaps = 51/422 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVP-DFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I KA + D A+ LLD++ V D + T LI+ R G ++ A+ F+
Sbjct: 117 VINGFCKAGQVDQAF-ELLDEMKERGVKMDVLLHST---LIQGLCRKGRIDEALEQFK-- 170
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF---HKRKELDQSWAPTVRVYNILL 116
M + + +++ LCK R+ A E F KR E P V Y+ ++
Sbjct: 171 ---SMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR----- 171
+ +++ V A ++ MR PNVVTY +L++G C++ R + L+ M+
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287
Query: 172 ------------------------------KEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
K G +PN + YN + GL +AGR +E +
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + + P ++TY+S++ G+CKAG ++ A + M+ +P P T+ FS+
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
K +A ++ M+ +G+ P TY++L+ +C D ++ A+++ +MK + D +T
Sbjct: 408 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNT 467
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
LI LCR + DEA + M +VP+ L + K+G + C+V+
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV---DEACSVLD 524
Query: 382 SV 383
+V
Sbjct: 525 NV 526
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 171/369 (46%), Gaps = 14/369 (3%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KA D A+ +LL+ + PD + T+ +I + +AG ++ A F M
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVI---TYSSIIDGFCKAGRMDKADDVFTRM----M 387
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSK 123
V F LL + K + E F +++ + + P ++ YN+L++ +
Sbjct: 388 VHECIPHPVTFMTLLHGFSEH---KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGAD 444
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+V+ A + +M+++ P+ TY L++ CR RRVD A + M + + PN + +
Sbjct: 445 SVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICH 504
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+++ L + G +E +++ + P T+ LV+ E ASK+L+ S
Sbjct: 505 ALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLR---SP 561
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
GF+ TY+ K GK ++A+ + +M+ G PD TY +L+ LC D+++ A
Sbjct: 562 GFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESA 621
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
I ++M RGC L T T+LI C DEA FE M+ G P T + L+
Sbjct: 622 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSC 681
Query: 364 FKKRGMTAL 372
+ G L
Sbjct: 682 LRDAGYQDL 690
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 16/323 (4%)
Query: 54 WTF-EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVY 112
WTF ++A N F A +LL++ K R + A ++EL+ P +Y
Sbjct: 60 WTFFQWAGNK---PGFQHNAYTCAVLLNAFVKAKRHEEAHRLL--KEELEPLCFPNEIMY 114
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
++NG+ ++ V A EM++ V +V+ + TL++G CR R+D A+ K M +
Sbjct: 115 TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 174
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLV---CEPGPTMVTYTSLVKGYC 225
E PN I YNTV++GL +A R +E M +R+ CE P +++Y++++ C
Sbjct: 175 E-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCE--PDVISYSTVIDALC 231
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
KA ++ A + K M + G P+ TY+ K + + + L M E G+ + +
Sbjct: 232 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINII 291
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
++ +L L K D+ + A Q + + G ++ T + +H LC+ + DEA +M
Sbjct: 292 DFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM 351
Query: 346 IRRGLVPHYLTFKRLNDEFKKRG 368
+ + P +T+ + D F K G
Sbjct: 352 VESKVTPDVITYSSIIDGFCKAG 374
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 147/356 (41%), Gaps = 69/356 (19%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L +L K + A ++F + L P V YN+ ++G ++ V +A R LE
Sbjct: 293 FNAMLHALWKNDEQEKACQFFERL--LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLE 350
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRA------------------------------- 163
M + VTP+V+TY ++++G+C+ R+D+A
Sbjct: 351 MVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKK 410
Query: 164 ----IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
R+ ++M G P YN ++D + A E + + + P TY
Sbjct: 411 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAP 470
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L++ C+A ++ A + L +M + +P+ + K G+V++A ++ ++E G
Sbjct: 471 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVG 530
Query: 280 YTP--------------------------------DRLTYHILLKILCKEDKLDLAIQVS 307
P D TY + + +CK K D A++V
Sbjct: 531 CQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVI 590
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++M +G D T ++ LC + + + A AEFE M RG P +T+ L E
Sbjct: 591 EQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGE 646
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 2/296 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A+ F L+ LC +G++ A F K + + + P V Y L+NG + N A R
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKM--IGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + N PNVV + TL++ C+ R+V A + EM +GI PN + YN++I GL +
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
++ V+ +M + + P + T ++V CK G + A ++ MMI RG P+ T
Sbjct: 258 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN +V+ A+ ++ M+ + ++Y+ L+ CK +D A+ + +EM
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 377
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ + T LIH LC + + +A + F +M+ RG +P +T++ L+D K
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 47/389 (12%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF LIR G + A+ F+ M+ + F + L++ L
Sbjct: 135 GHQ-PD---ATTFTTLIRGLCVEGKIGEALHLFD-----KMIGEGFQPNVVTYGTLINGL 185
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G AA ++ + P V V++ L++ + + V +A + EM + ++P
Sbjct: 186 CKVGNTSAAIRLLRSMEQ--GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N+VTY +L+ G C+L L+ EM I P+ NTV+D L + G E ++
Sbjct: 244 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG------------------ 244
+ + P +VTY +L+ G+C +++ A K+ M+ +
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 363
Query: 245 -----------------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
P+ TYN G+++DA++L+ +M+ G PD +TY
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L LCK LD A+ + K ++ D D+ T ++ +CR + ++A F ++
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+GL P+ T+ + K+G+ A A KL
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKL 512
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I+++SLC RV A K +L P + L+ G + +A + +
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCVEGKIGEALHLFDK 165
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E PNVVTYGTL+ G C++ AIRL++ M + +PN +V++T+ID L + +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P +VTY SL+ G CK + + + ++ M+ +P T N
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G V +A ++ MI G P+ +TY+ L+ C +++D+A++V M +
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C ++ + LI+ C++ D+A FE+M R+ L P+ +T+ L
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 13/331 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E+ L+ + + +PD + +T V + GMV A +
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV---DALCKEGMVAEA------HD 301
Query: 61 NLDMV--KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+DM+ + + + L+D C + V A + F D V YN L+NG
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD--CVANVISYNTLING 359
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + ++V A + EM ++ +TPN VTY TL+ G C + R+ AI L EM G P+
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y T+ D L + ++ +++ P + YT+++ G C+AG+LE A +
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ S+G P+ TYN K G + +A L+ +M ++G +P+ TY+++ + + +
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ I++ +EM RG +D+ T+T+L+ +L
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGML 570
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 161/383 (42%), Gaps = 45/383 (11%)
Query: 18 LLDK-IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
L DK IG P+ V T+ LI + G AAI N +F
Sbjct: 162 LFDKMIGEGFQPNVV---TYGTLINGLCKVGNTSAAIRLLRSMEQ----GNCQPNVVVFS 214
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG------W----------- 119
L+DSLCK +V A F + + + +P + YN L++G W
Sbjct: 215 TLIDSLCKDRQVTEAFNIF--SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 120 --------FRSKNVKDA---ERFWLE-------MRKENVTPNVVTYGTLVEGYCRLRRVD 161
F V DA E E M V PNVVTY L++G+C VD
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A+++ M + N I YNT+I+G + ++ + E E P VTY +L+
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G C G L+ A + M++RG +P TY Y K ++ AM L + + S +
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD Y +L +C+ +L+ A + + +G ++ T ++IH LC+ EAS
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512
Query: 342 FEDMIRRGLVPHYLTFKRLNDEF 364
F +M + G P+ T+ + F
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGF 535
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + P+ +N LL ++K+ +M + P+V T ++ C L RV
Sbjct: 62 LHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRV 121
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A + ++ K G +P+A + T+I GL G+ E + ++ + P +VTY +L
Sbjct: 122 DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 181
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK G+ A ++L+ M P+ ++ K +V +A N++ +MI G
Sbjct: 182 INGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGI 241
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+P+ +TY+ L+ LCK + + EM D+ T ++ LC+ EA
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ MI RG+ P+ +T+ L D R +A K+ + M
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 10/268 (3%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ V + L+ + + + L ++M GI P+ VI+ L R
Sbjct: 61 MLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNR 120
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + L P T+T+L++G C G + A + MI GF P+ TY
Sbjct: 121 VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 180
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G A+ L R M + P+ + + L+ LCK+ ++ A + EM +G
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LIH LC++ ++ + +M+ ++P T + D K GM A A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 375 KLCNVMSSVPRSME--------LLDSRC 394
+ ++M + R +E L+D C
Sbjct: 301 DVVDMM--IHRGVEPNVVTYNALMDGHC 326
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
V + +S +T LI Y + V+ A++ FE + ++ N + L+ LC G
Sbjct: 347 VANVISYNT---LINGYCKIQSVDKAMYLFEEMSRQELTPN----TVTYNTLIHGLCHVG 399
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R++ A FH+ Q P + Y L + +++++ A + N P++
Sbjct: 400 RLQDAISLFHEMVARGQ--IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T+++G CR ++ A L + +G++PN YN +I GL + G E S +
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P TY + +G+ + + ++L+ M++RGF +T S G
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
L+ A M+ + PS +N +K ++L R+M G PD T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ LC +++D A ++ G D T T LI LC K EA F+ MI G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
P+ +T+ L + K G T+ A +L N +V L+DS CKD
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%)
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+NT + +E R L +P P+ V + L+ K + + M
Sbjct: 38 HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S G P T +V+ A + K+++ G+ PD T+ L++ LC E K+
Sbjct: 98 SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + +M G ++ T LI+ LC++ A M + P+ + F L
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217
Query: 362 DEFKK 366
D K
Sbjct: 218 DSLCK 222
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 143/287 (49%), Gaps = 1/287 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ LL C + R + A E H + +S P V Y I++NG+F V A +L
Sbjct: 168 YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFL 227
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + PNVVTY T+++G C+ + VDRA + ++M +G++P+ YN +I G + G
Sbjct: 228 EMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+++EV M+E P TY SL+ C G A + MI +G P+ Y
Sbjct: 288 KWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYG 347
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
++ G + + +L M+E+G +PD ++I+ K+ +D A+ + +MK +
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D+ LI LC++ + D+A +F M+ G+ P+ F L
Sbjct: 408 GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 159/333 (47%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I+ YA+ M++ A+ F N + + L+D+LCK GRV A F
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIF----NKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ AP + V+N L+ G + A+ F+ EM + + P+VV + T++ C
Sbjct: 437 NQM--MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLC 494
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+V +A RL+ M + G P I Y T+I G GR +E + ++ L P
Sbjct: 495 TKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEW 554
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC+AG ++ A + + M+ G P TY+ + +A LY M
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM 614
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG + Y+I+L L K + +D A ++ + + + +++ T ++I L + +
Sbjct: 615 ITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRN 674
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLVP T+ + + + G
Sbjct: 675 EDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 6/347 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ ILI YA G A+ NL + +F I+ + K+ + A F
Sbjct: 346 YGILIHGYATKG----ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+K K+ Q +P V Y L++ + V DA + +M E V PN+ + +LV G C
Sbjct: 402 NKMKQ--QGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + ++A EM +GI P+ + +NT++ L G+ + +++ P ++
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI 519
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+YT+L+ G+C G ++ A+K L +M+S G P TYN + + G+++DA ++R+M
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ +G TP +TY +L L + A ++ M G ++ ++++ L +
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCV 639
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+ + + TF + K G A L +SS
Sbjct: 640 DEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 46/378 (12%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV- 65
+A+E ++ D G P+ VS + I+I + G V+ A F L+M+
Sbjct: 180 RAEEALELLHMMADSQGRSCPPNVVS---YAIVINGFFTEGQVDKAYNLF-----LEMMD 231
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ + ++D LCK V A F ++ +D+ P YN L++G+
Sbjct: 232 RGIQPNVVTYTTVIDGLCKAQVVDRAEGVF--QQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K+ R EM + P+ TYG+L+ C R A L M ++GI+PN +Y +
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I GY G L +L +M+ G
Sbjct: 350 I-----------------------------------HGYATKGALSEMHDLLNLMVENGL 374
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P +N F ++K +++AM+++ KM + G +PD + Y L+ LCK ++D A+
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVL 434
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+M G ++ L++ LC + K+++A + +M+ +G+ P + F +
Sbjct: 435 KFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLC 494
Query: 366 KRGMTALAQKLCNVMSSV 383
+G AQ+L ++M V
Sbjct: 495 TKGQVMKAQRLIDLMERV 512
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 4/225 (1%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF-EEV 198
VTP+ TY L+ +CR+ R++ + K G N IV N ++ GL +A R E +
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYF 255
+++R P +V+Y +L+KG+C E A ++L MM R P+ +Y
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F G+V+ A NL+ +M++ G P+ +TY ++ LCK +D A V ++M +G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D DT LIH + K+ E E+M GL P T+ L
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 151/351 (43%), Gaps = 10/351 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ + LI + G V+ A+ F N + N +F L+ LC +
Sbjct: 411 PDVVN---YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI----FVFNSLVYGLCTVDK 463
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E++ + L+Q P V +N +L V A+R M + P V++Y
Sbjct: 464 WEKAKEFYFEM--LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISY 521
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C + R+D A + + M G++P+ YNT++ G AGR ++ G+ L
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY++++ G A ++ MI+ G + YN SK V++
Sbjct: 582 NGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDE 641
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L++ + + + T++I++ L K + + A+ + + G D+ T ++
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAE 701
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG-MTALAQKLC 377
L +E F M + G P+ L RG +T LC
Sbjct: 702 NLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLC 752
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 37/293 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F +L +LC +G+V A + + P V Y L+ G + +A +
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTR--PGVISYTTLIGGHCLVGRIDEAAKSLD 542
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + P+ TY TL+ GYCR R+D A + +EM + GI P + Y+T++ GL
Sbjct: 543 VMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTR 602
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
RF E + + + Y ++ G K ++ A K+ + + S+ F TT+N
Sbjct: 603 RFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFN 662
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE------DKLDLAIQVS 307
K G+ EDAM+L+ + G PD TY ++ + L +E D L A++ S
Sbjct: 663 IMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKS 722
Query: 308 -------------KEMKCRG---------CDID-------LDTSTMLIHLLCR 331
+ + RG C +D T+ MLI LL R
Sbjct: 723 GTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSR 775
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 9/219 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ L+ Y RAG ++ A F +M++N G + +L L R A E
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFR-----EMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + W + +YNI+LNG ++ V +A + + + ++ + T+ ++
Sbjct: 610 LYLNMITSGKQW--NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+ R + A+ L + G+ P+ Y + + L+E G EE + P
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGF-LPSPTT 251
+LV+ GD+ A L + + F L + TT
Sbjct: 728 SRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTT 766
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 148/291 (50%), Gaps = 2/291 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A+ F L+ LC +G++ A F K + + + P V Y L+NG + N A R
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKM--IGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + N PNVV + TL++ C+ R+V A + EM +GI PN + YN++I GL +
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
++ V+ +M + + P + T ++V CK G + A ++ MMI RG P+ T
Sbjct: 258 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN +V+ A+ ++ M+ + ++Y+ L+ CK +D A+ + +EM
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 377
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ + T LIH LC + + +A + F +M+ RG +P +T++ L+D
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 428
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 176/394 (44%), Gaps = 47/394 (11%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF LIR G + A+ F+ M+ + F + L++ L
Sbjct: 135 GHQ-PD---ATTFTTLIRGLCVEGKIGEALHLFD-----KMIGEGFQPNVVTYGTLINGL 185
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G AA ++ + P V V++ L++ + + V +A + EM + ++P
Sbjct: 186 CKVGNTSAAIRLLRSMEQ--GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N+VTY +L+ G C+L L+ EM I P+ NTV+D L + G E ++
Sbjct: 244 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 303
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG------------------ 244
+ + P +VTY +L+ G+C +++ A K+ M+ +
Sbjct: 304 DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 363
Query: 245 -----------------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
P+ TYN G+++DA++L+ +M+ G PD +TY
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L LCK LD A+ + K ++ D D+ T ++ +CR + ++A F ++
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+GL P+ T+ + K+G+ A A KL + M+
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I+++SLC RV A K +L P + L+ G + +A + +
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCVEGKIGEALHLFDK 165
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E PNVVTYGTL+ G C++ AIRL++ M + +PN +V++T+ID L + +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P +VTY SL+ G CK + + + ++ M+ +P T N
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G V +A ++ MI G P+ +TY+ L+ C +++D+A++V M +
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C ++ + LI+ C++ D+A FE+M R+ L P+ +T+ L
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 13/331 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E+ L+ + + +PD + +T V + GMV A +
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV---DALCKEGMVAEA------HD 301
Query: 61 NLDMV--KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+DM+ + + + L+D C + V A + F D V YN L+NG
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD--CVANVISYNTLING 359
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + ++V A + EM ++ +TPN VTY TL+ G C + R+ AI L EM G P+
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y T+ D L + ++ +++ P + YT+++ G C+AG+LE A +
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ S+G P+ TYN K G + +A L+ +M ++G +P+ TY+++ + + +
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ I++ +EM RG +D+ T+T+L+ +L
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGML 570
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 161/383 (42%), Gaps = 45/383 (11%)
Query: 18 LLDK-IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
L DK IG P+ V T+ LI + G AAI N +F
Sbjct: 162 LFDKMIGEGFQPNVV---TYGTLINGLCKVGNTSAAIRLLRSMEQ----GNCQPNVVVFS 214
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG------W----------- 119
L+DSLCK +V A F + + + +P + YN L++G W
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEM--ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 120 --------FRSKNVKDA---ERFWLE-------MRKENVTPNVVTYGTLVEGYCRLRRVD 161
F V DA E E M V PNVVTY L++G+C VD
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A+++ M + N I YNT+I+G + ++ + E E P VTY +L+
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G C G L+ A + M++RG +P TY Y K ++ AM L + + S +
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD Y +L +C+ +L+ A + + +G ++ T ++IH LC+ EAS
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512
Query: 342 FEDMIRRGLVPHYLTFKRLNDEF 364
F +M + G P+ T+ + F
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGF 535
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + P+ +N LL ++K+ +M + P+V T ++ C L RV
Sbjct: 62 LHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRV 121
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A + ++ K G +P+A + T+I GL G+ E + ++ + P +VTY +L
Sbjct: 122 DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 181
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK G+ A ++L+ M P+ ++ K +V +A N++ +MI G
Sbjct: 182 INGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGI 241
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+P+ +TY+ L+ LCK + + EM D+ T ++ LC+ EA
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ MI RG+ P+ +T+ L D R +A K+ + M
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 10/268 (3%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ V + L+ + + + L ++M GI P+ VI+ L R
Sbjct: 61 MLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNR 120
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + L P T+T+L++G C G + A + MI GF P+ TY
Sbjct: 121 VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 180
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G A+ L R M + P+ + + L+ LCK+ ++ A + EM +G
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LIH LC++ ++ + +M+ ++P T + D K GM A A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 375 KLCNVMSSVPRSME--------LLDSRC 394
+ ++M + R +E L+D C
Sbjct: 301 DVVDMM--IHRGVEPNVVTYNALMDGHC 326
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
V + +S +T LI Y + V+ A++ FE + ++ N + L+ LC G
Sbjct: 347 VANVISYNT---LINGYCKIQSVDKAMYLFEEMSRQELTPN----TVTYNTLIHGLCHVG 399
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R++ A FH+ Q P + Y L + +++++ A + N P++
Sbjct: 400 RLQDAISLFHEMVARGQ--IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T+++G CR ++ A L + +G++PN YN +I GL + G E S +
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P TY + +G+ + + ++L+ M++RGF +T S G
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A L + + ++PD V+ T + + A + E +N
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+D ++ +LD +C+ G ++ A + F + P V YNI+++G
Sbjct: 451 -------WDPDIQIYTTILDGMCRAGELEDARDLFSNLSS--KGLQPNVWTYNIMIHGLC 501
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A + + EM K +PN TY + G+ R R I L++EM G +
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ L + G + V ++ + ++
Sbjct: 562 TTTLLVGMLSDDGLDQSVKQILCKIVI 588
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
L+ A M+ + PS +N +K ++L R+M G PD T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ LC +++D A ++ G D T T LI LC K EA F+ MI G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
P+ +T+ L + K G T+ A +L N +V L+DS CKD
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%)
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+NT + +E R L +P P+ V + L+ K + + M
Sbjct: 38 HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S G P T +V+ A + K+++ G+ PD T+ L++ LC E K+
Sbjct: 98 SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + +M G ++ T LI+ LC++ A M + P+ + F L
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217
Query: 362 DEFKK 366
D K
Sbjct: 218 DSLCK 222
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 175/337 (51%), Gaps = 10/337 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKA 90
+K T+ ILIR ++ AG ++ AI E +M N F+ A + L+ LC GRV
Sbjct: 8 NKFTYGILIRGFSSAGDLDIAIQLLE-----EMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E+F + + + AP V Y L++ ++ +A+ EM P+ VT+ TL
Sbjct: 63 ALEHF---RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++G C+ ++A R+++++ + G+ + + T+I L E++ + ++ +
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179
Query: 211 -GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT++ + ++ G+CKA DL+ A K+L++MI +G +P+ T+ K +V +A
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L KM+ G +P+ +TY ++ LCK+ ++D A ++ + M+ R C ++ T +LI L
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 299
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
C+ + +EA + M G P +T+ L D K
Sbjct: 300 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 336
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 191/455 (41%), Gaps = 82/455 (18%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA +FD A +L + I PD V TF LI + G E A E
Sbjct: 84 LVHALCKAGKFDEAQGMLREMIARGCAPDTV---TFSTLIDGLCKFGSEEQAFRVLE--- 137
Query: 61 NLDMV-KNFDSGASLFEILLDSLC-KQGRVKAASEY----------------------FH 96
D++ + + + FE ++ LC K V+ AS+ F
Sbjct: 138 --DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 195
Query: 97 KRKELDQSW-----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
K K+LD ++ P V + IL+ G ++ V +A++ +M +PNVV
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVV 255
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY T++ G C+ +VD A L + M + PN + +N +IDGL +A R EE + R
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 315
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF-LPSPTTYNYFFRYFSKFGK 264
P ++TY SL+ G CK+ ++ A ++ + + G + TY+ F ++ G+
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK------------------------- 299
+ DA ++ +++ G++PD TY L+ CK +
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435
Query: 300 ----------LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI--- 346
+ AIQ+ M RGC D +++ + R K ++A A E +I
Sbjct: 436 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKR 495
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
R P L + + G T A++L + MS
Sbjct: 496 DRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMS 530
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 8/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P Y IL+ G+ + ++ A + EM+ N V + TL++G C RV A+
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M K+ P+ + Y ++ L +AG+F+E GM+ + P VT+++L+ G CK
Sbjct: 67 FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFF-RYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G E A ++L+ +I RG S + R +K+ VE A + +I G+TP L
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+++++ CK LD A ++ + M +GC ++ T T+LI LC+ + EA E M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSRCK 395
+ G P+ +T+ + + K+G A +L +M +V L+D CK
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 175/434 (40%), Gaps = 83/434 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA A LL + G P+ V T+ +I + G V+ A F+
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVV---TYSTVINGLCKQGQVDDAYELFQLME 281
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+N IL+D LCK R++ A + +H+ +E AP + YN L++G
Sbjct: 282 R----RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE--TGCAPDIITYNSLIDGLC 335
Query: 121 RSKNV------------------------------------KDAERFWLEMRKENVTPNV 144
+S V DA R + + + +P++
Sbjct: 336 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 395
Query: 145 VTYGTLVEGYCRLRRV-----------------------------------DRAIRLVKE 169
TY +L+ YC+ R +RAI+L
Sbjct: 396 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 455
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP---GPTMVTYTSLVKGYCK 226
M G +A++YN V++G+ A + + ++E+ + P+ +LV+ C+
Sbjct: 456 MAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++L M RGF + ++YN S+ + ++A ++ M+ +G P+ T
Sbjct: 516 VGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 575
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
++++ LC K+D A ++ + M GC D++T LI C+ + D A E+M
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 635
Query: 347 RRGLVPHYLTFKRL 360
GL P+ T L
Sbjct: 636 EAGLEPNDTTHDLL 649
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++R +P+ TY R FS G ++ A+ L +M +G+ + + + L+K LC ++
Sbjct: 1 MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A++ + M + C D+ T T L+H LC+ KFDEA +MI RG P +TF L
Sbjct: 61 VEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119
Query: 361 NDEFKK----------------RGMT-------ALAQKLCNVMSSVPRSMELL 390
D K RGM + Q+LCN +SV + ++L
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVL 172
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+++L K+G+ A E +++ L + P YN +++G+ + + AER +
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEM--LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL 378
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +P+V+T+ L++GYC +RVD ++L+ EM + G+ N I Y T+I G + G
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM--------ISRGF- 245
+++ + P +VT +L+ G C G L+ A ++ K+M S F
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 246 --LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
P TYN GK +A LY +M G PD +TY+ ++ LCK+ +LD A
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M +G D+ T T LI+ C++ + + F +M RRG+V + +T++ L
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618
Query: 364 FKKRG 368
F + G
Sbjct: 619 FCQVG 623
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 168/382 (43%), Gaps = 46/382 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F ILI+ + + A+ TF L F F LL LC + RV A +
Sbjct: 113 SFTILIKCFCSCSKLPFALSTFGKITKL----GFHPSLVTFSTLLHGLCVEDRVSEALHF 168
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
FH Q P V + L+NG R V +A M ++ + PN +TYGT+V+G
Sbjct: 169 FH------QICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222
Query: 155 CR----------LRRVDRAIR--------------------------LVKEMRKEGIEPN 178
C+ LR+++ R L EM+++GI PN
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN +I+G +GR+ E ++ + P +VT++ L+ K G A ++
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYN 342
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ RG +P+ TYN FSK +++ A ++ M G +PD +T+ IL+ C
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK 402
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D +++ EM RG + T T LIH C++ + A ++MI G+ P+ +T
Sbjct: 403 RVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCN 462
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
L D G A ++ VM
Sbjct: 463 TLLDGLCNNGKLKDALEMFKVM 484
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 156/320 (48%), Gaps = 13/320 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D L K GR A F + +E + +P + YN ++NG+ S +A+R
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQE--KGISPNLFTYNCMINGFCSSGRWSEAQRLLR 307
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVT+ L+ + + A L EM GI PN I YN++IDG +
Sbjct: 308 EMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQN 367
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P ++T++ L+ GYC A ++ K+L M RG + + TY
Sbjct: 368 RLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYT 427
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F + G + A++L ++MI SG P+ +T + LL LC KL A+++ K M+
Sbjct: 428 TLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKS 487
Query: 314 GCDI-----------DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
D+ D+ T +LI L KF EA +E+M RGLVP +T+ + D
Sbjct: 488 KMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVID 547
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K+ A ++ + M S
Sbjct: 548 GLCKQSRLDEATQMFDSMGS 567
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 26/347 (7%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V TF +LI + E + E N + + + ++D KQ R
Sbjct: 316 PDVV---TFSVLINALVK----EGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ AA F+ + +P V ++IL++G+ +K V D + EM + + N +TY
Sbjct: 369 LDAAERMFYLMAT--KGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITY 426
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C+L ++ A+ L++EM G+ PN + NT++DGL G+ ++ +E F V
Sbjct: 427 TTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA---LEMFKV 483
Query: 208 CEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ P + TY L+ G G A ++ + M RG +P TYN
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K ++++A ++ M G++PD +T+ L+ CK ++ ++V EM R
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G + T LIH C++ + A F++MI G+ P +T + +
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNM 650
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 163/364 (44%), Gaps = 48/364 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L + P++ ++ LL+G V +A F+ +
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKL--GFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
+ K PNV+ + TL+ G CR RV A+ L+ M ++G++PN I Y T++DG+ + G
Sbjct: 172 ICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227
Query: 194 ---------RFEEVSGMMERFLVCEP--------------------------GPTMVTYT 218
+ EEVS + ++ P + TY
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ G+C +G A ++L+ M R P T++ K GK +A LY +M+
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY+ ++ K+++LD A ++ M +GC D+ T ++LI C + D+
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSMELLDS 392
+M RRGLV + +T+ L F + G A L M S V LLD
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467
Query: 393 RCKD 396
C +
Sbjct: 468 LCNN 471
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 142/316 (44%), Gaps = 20/316 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +K D+A + PD + TF ILI Y A V+ + +
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVI---TFSILIDGYCGAKRVDDGMKLLHEMS 415
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+V N + L+ C+ G + AA + + + P V N LL+G
Sbjct: 416 RRGLVAN----TITYTTLIHGFCQLGNLNAALDLLQEM--ISSGVCPNVVTCNTLLDGLC 469
Query: 121 RSKNVKDAERFWLEMRKE-----------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
+ +KDA + M+K +V P+V TY L+ G + A L +E
Sbjct: 470 NNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEE 529
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M G+ P+ I YN+VIDGL + R +E + M + P +VT+T+L+ GYCK G
Sbjct: 530 MPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR 589
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ ++ M RG + + TY F + G + A++++++MI SG PD +T
Sbjct: 590 VGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRN 649
Query: 290 LLKILCKEDKLDLAIQ 305
+L L +++L A+Q
Sbjct: 650 MLTGLWSKEELKRAVQ 665
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 108/244 (44%), Gaps = 12/244 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + ++A LL + I P+ V+ +T L+ G ++ A+ F+
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNT---LLDGLCNNGKLKDALEMFKVMQ 485
Query: 61 ----NLDMVKNFDS---GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYN 113
+LD F+ + IL+ L +G+ A E + + + P YN
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH--RGLVPDTITYN 543
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+++G + + +A + + M + +P+VVT+ TL+ GYC++ RV + + EM +
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GI NAI Y T+I G + G + + + P +T +++ G +L+ A
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
Query: 234 SKIL 237
+ L
Sbjct: 664 VQCL 667
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 115/305 (37%), Gaps = 69/305 (22%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L G+ ++ +D AI L M + P I + ++ +V R + V + + +
Sbjct: 47 LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN---------------- 253
+ ++T L+K +C L A + GF PS T++
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166
Query: 254 YFFRYFSKF---------------GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+FF K G+V +A+ L +M+E G P+++TY ++ +CK
Sbjct: 167 HFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226
Query: 299 KLDLAI-------QVSK-----------------------------EMKCRGCDIDLDTS 322
A+ +VS+ EM+ +G +L T
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTY 286
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I+ C ++ EA +M R + P +TF L + K G A++L N M
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEM-- 344
Query: 383 VPRSM 387
+PR +
Sbjct: 345 LPRGI 349
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQG+V A
Sbjct: 341 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA R++ +M E ++P + Y +L+
Sbjct: 395 LVFSKMRQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
C + D+A L+ EM GI + I +N++ID + GR E + + + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY++L+ GYC AG ++ A+K+L M+S G P TYN + K ++EDA+ L+
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M SG +PD +TY+I+L+ L + + A ++ + G ++L T +++H LC+
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+++ L TF + K G A+ L +S+
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL LC + R + A E + P V Y ++NG+F+ ++ A + E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY +++ C+ + +D+A+ ++ M K G+ PN YN+++ G +G+
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G +++ P +VTY SL+ CK G A K+ M RG P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ G + + L M+ +G P+ + IL+ K+ K+D A+ V +M+ +G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ D T +I +LC+ + ++A FE MI L P + + L
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ G V+ A+ F + + + ++ LCK GRV+ A YF
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQ----QGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++ A+ LEM + + + + ++++ +C
Sbjct: 433 EQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++PN I Y+T+IDG AG+ +E + ++ + P V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYCK +E A + + M S G P TYN + + + A LY +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK + D A+++ + + ++ T ++I L ++ +
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F + GLVP T+ + + ++G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 167/361 (46%), Gaps = 9/361 (2%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
GG PD VS + +I + + G ++ A T+ + ++ N + + ++ +L
Sbjct: 192 GGDCPPDVVS---YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT----YNSIIAAL 244
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK + A E + P R YN +++G+ S K+A F +M + V P
Sbjct: 245 CKAQAMDKAMEVLTSM--VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVTY +L++ C+ R A ++ M K G++P Y T++ G G E+ G++
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P ++ L+ Y K G ++ A + M +G P TY K
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+VEDAM + +MI+ +P + Y+ L+ LC DK D A ++ EM RG +D
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I C+ + E+ F+ M+R G+ P+ +T+ L D + G A KL M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 383 V 383
V
Sbjct: 543 V 543
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 138 ENVTPNVVTYGTLV-----------------------------------EGYCRLRRVDR 162
+ VTPN+ TYG L+ +G C +R
Sbjct: 85 DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144
Query: 163 AIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTY 217
A+ +V + M + G PN YN ++ GL + R +E +++ ++ + G P +V+Y
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ--MMPDDGGDCPPDVVSY 202
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T+++ G+ K GDL+ A M+ RG LP+ TYN K ++ AM + M++
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G P+ TY+ ++ C + AI K+M G + D+ T L+ LC+ + E
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F+ M +RGL P T+ L + +G L ++M
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P YN L+NG+ + ++DA + E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSV--GMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G + A + + + G +P TY+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G T + R+ I+ K+L + D
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 156/320 (48%), Gaps = 13/320 (4%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D L K GR A + + +E + P + YN +++G+ S +A+R
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQE--KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQ 308
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + PNVVTY L+ Y + R+ A L EM GI PN I YN++IDG +
Sbjct: 309 EMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQN 368
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + M P + T+ +L+ GYC A ++ +++L M G + TTYN
Sbjct: 369 RLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYN 428
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK-- 311
F G + A++L ++MI SG PD +T + LL LC KL A+++ K M+
Sbjct: 429 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 488
Query: 312 ---------CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
G + D+ T +LI L KF EA +++M RG+VP+ +T+ + +
Sbjct: 489 KMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMIN 548
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K+ A ++ + M S
Sbjct: 549 GLCKQSRLDEATQMFDSMGS 568
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 168/369 (45%), Gaps = 17/369 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F ILI+ + + A+ TF L F F LL LC + RV A +
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKL----GFQPDVVTFSTLLHGLCVEDRVSEALDL 169
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
FH Q P V + L+NG R V +A M ++ + PN +TYGT+V+G
Sbjct: 170 FH------QMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223
Query: 155 CRLRRVDRAIRLVKEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C++ A+ L+++M + I+PN ++Y+ +IDGL + GR + + P
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TY ++ G+C +G A ++L+ M+ R P+ TY+ + K K +A LY
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYD 343
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M+ G P+ +TY+ ++ CK+++LD A + M +GC D+ T LI C
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAK 403
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSM 387
+ D+ + +M GLV T+ L F G A L M S +
Sbjct: 404 RIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 463
Query: 388 ELLDSRCKD 396
LLD C +
Sbjct: 464 TLLDGLCDN 472
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 145/340 (42%), Gaps = 48/340 (14%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D C GR A + L++ P V Y+ L+N + + + +AE + E
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEM--LERKINPNVVTYSALINAYVKERKFFEAEELYDE 344
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN +TY ++++G+C+ R+D A + M +G P+ +NT+IDG A R
Sbjct: 345 MLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKR 404
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + ++ TY +L+ G+C GDL A + + MIS G P T N
Sbjct: 405 IDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 464
Query: 255 FFRYFSKFGKVEDAMN-------------------------------------------- 270
GK++DA+
Sbjct: 465 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEA 524
Query: 271 --LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
LY++M G P+ +TY ++ LCK+ +LD A Q+ M + D+ T L+
Sbjct: 525 EELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSG 584
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ + D+ F +M RRG+V +T+ L F+K G
Sbjct: 585 YCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 144/300 (48%), Gaps = 19/300 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA F+ + +P V +N L++G+ +K + D E
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMAT--KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHE 414
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + + TY TL+ G+C + ++ A+ L ++M G+ P+ + NT++DGL + G+
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474
Query: 195 FEEVSGMMERFLVCEPG--------------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ +E F + P + TY L+ G G A ++ K M
Sbjct: 475 LKDA---LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEM 531
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG +P+ TY+ K ++++A ++ M ++PD +T++ L+ CK ++
Sbjct: 532 PHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRV 591
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D +++ EM RG D T LIH ++ + A F++MI G+ P +T + +
Sbjct: 592 DDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSM 651
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 13/282 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D C R+ +E H+ E YN L++G+ ++ A +
Sbjct: 392 FNTLIDGYCGAKRIDDGTELLHEMTE--TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-----------GIEPNAIVYN 183
M V P++VT TL++G C ++ A+ + K M+K G+EP+ YN
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL+ G+F E + + P +TY+S++ G CK L+ A+++ M S+
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
F P T+N + K G+V+D + L+ +M G D +TY L+ K ++ A
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+ + +EM G D T ++ +L + A A ED+
Sbjct: 630 LDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y A ++ +V + + + L+ C G + AA +
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD----TTTYNTLIHGFCLVGDLNAALDL 446
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-----------NVTPN 143
++ + P + N LL+G + +KDA + M+K V P+
Sbjct: 447 --SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPD 504
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V TY L+ G + A L KEM GI PN I Y+++I+GL + R +E + M +
Sbjct: 505 VQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFD 564
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VT+ +LV GYCKAG ++ ++ M RG + TY F K G
Sbjct: 565 SMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ A++++++MI SG PD +T +L +L +++L A+ + ++++
Sbjct: 625 NINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 142/335 (42%), Gaps = 67/335 (20%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE- 173
L +G+ K ++DA + +M + P+V+ + L+ R+ R D I L ++M ++
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 174 ----------------------------------GIEPNAIVYNTVIDGLV------EA- 192
G +P+ + ++T++ GL EA
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167
Query: 193 ------------------------GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
GR E +++R + P +TY ++V G CK G
Sbjct: 168 DLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227
Query: 229 DLEGASKILKMMISRGFL-PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
D A +L+ M + P+ Y+ K G+ DA NLY +M E G PD TY
Sbjct: 228 DTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY 287
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ ++ C + A ++ +EM R + ++ T + LI+ + KF EA +++M+
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
RG++P+ +T+ + D F K+ A+ + VM++
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 188/379 (49%), Gaps = 14/379 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + KA + + A ++ + + PD T+ +LI + R + A FE
Sbjct: 352 LLNGVCKAGKMEKALEIMQEMMEKGVEPD---SQTYSLLIEGHCRGQNMARA---FEL-- 403
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD +K ++ + ++++ LC+ G ++ + R+ + P VY L+
Sbjct: 404 -LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAIL--REMVMNGLKPNAVVYTTLMTA 460
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ V+++ MR++ + P+V Y +L+ G+C+ +R++ A + EM + + PN
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A Y IDG +AG E L C P + YT+L++G+CK G++ A + +
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
++SR L TY+ S+ GK+ +A ++ ++ E G P+ TY+ L+ CK+
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+D A Q+ +EM +G + D+ T +LI LC+ + + A F+D+ RGL P+ +T+
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700
Query: 359 RLNDEF-KKRGMTALAQKL 376
+ D + K + TA Q L
Sbjct: 701 AMVDGYCKSKNPTAAFQLL 719
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 171/343 (49%), Gaps = 8/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI + R G +E A F +MV ++ ++ LL+ +CK G+++ A E
Sbjct: 313 TYNALIDGFMRQGDIEQA-----FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 367
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ +++ P + Y++L+ G R +N+ A EM+K + P V+TY ++ G
Sbjct: 368 IMQEM--MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
CR + +++EM G++PNA+VY T++ + GR EE ++ER P
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ Y SL+ G+CKA +E A L M+ R P+ TY F +SK G++E A +
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 545
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M+ G P+ Y L++ CKE + A V + + R D+ T ++LIH L R
Sbjct: 546 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 605
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K EA F ++ +GL+P+ T+ L K+G A +L
Sbjct: 606 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 648
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 191/410 (46%), Gaps = 43/410 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KAK + A L++ + P+ T+ I Y++AG +E A F
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPN---AHTYGAFIDGYSKAGEMEIADRYFNEML 548
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ N ++ L++ CK+G V A F R L + V+ Y++L++G
Sbjct: 549 SCGVLPN----VGIYTALIEGHCKEGNVTEAFSVF--RFILSRRVLQDVQTYSVLIHGLS 602
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + +A + E++++ + PN TY +L+ G C+ VD+A +L++EM +GI P+ +
Sbjct: 603 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV 662
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +IDGL +AG E + + P VTY ++V GYCK+ + A ++L+ M
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 241 ISRGFLPSPTTYNYFFRY----------------------------------FSKFGKVE 266
+ RG P YN + + K GK++
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQ 782
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A +L +MIE + P+ +TY L+ CK + A ++ EM+ R T T L+
Sbjct: 783 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
H + E SA FE+M+ +G+ P +T+ + D + + G A KL
Sbjct: 843 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 10/350 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +I + R M EA + E + + A + +D K G
Sbjct: 483 LPDVFCYNSLIIGFCKAKR--MEEARTYLMEM-----LERRLRPNAHTYGAFIDGYSKAG 535
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A YF++ L P V +Y L+ G + NV +A + + V +V T
Sbjct: 536 EMEIADRYFNEM--LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G R ++ A + E++++G+ PNA YN++I G + G ++ S ++E
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +VTY L+ G CKAG++E A + + RG P+ TY + K
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L +M+ G PD Y+++L CKE+K + A+ + +EM +G + +T LI
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNT-LI 772
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ K EA+ E+MI + +P+++T+ L D K GM A++L
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 165/340 (48%), Gaps = 21/340 (6%)
Query: 78 LLDSLCKQGRVKAASEYFH---------------KRKELDQSWAPTVRVYNILLNGWFRS 122
++ + CK G VK A KR +D+ P + Y+IL+NG+
Sbjct: 230 MISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 289
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
K ++A+ LEM + P +TY L++G+ R +++A R+ EM GIE N I++
Sbjct: 290 KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW 349
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
NT+++G+ +AG+ E+ +M+ + P TY+ L++G+C+ ++ A ++L M
Sbjct: 350 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 409
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
R P+ TY+ + G ++ + R+M+ +G P+ + Y L+ KE +++
Sbjct: 410 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 469
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ + + M+ +G D+ LI C+ + +EA +M+ R L P+ T+ D
Sbjct: 470 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFID 529
Query: 363 EFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCKD 396
+ K G +A + C V+ +V L++ CK+
Sbjct: 530 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 569
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 46/368 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI +R G + A F ++ N A + L+ CKQG V AS+
Sbjct: 593 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN----AFTYNSLISGSCKQGNVDKASQL 648
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P + YNIL++G ++ ++ A+ + ++ +TPN VTY +V+GY
Sbjct: 649 LEEM--CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 706
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYN------------------------------- 183
C+ + A +L++EM G+ P+A +YN
Sbjct: 707 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV 766
Query: 184 ---TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
T+I+G ++G+ +E + ++E + + P VTYTSL+ CKAG + A ++ M
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
R +P+ TY + G + + L+ +M+ G PD++TY++++ C+E +
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 886
Query: 301 DLAIQVSKEMKCRGCD------IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
A ++ E+ +G + L T +++ DEA+ M++ G V +
Sbjct: 887 MEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNT 946
Query: 355 LTFKRLND 362
+ L D
Sbjct: 947 TSLGDLVD 954
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 179/403 (44%), Gaps = 50/403 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ ++I R G ++ +MV N A ++ L+ + K+GRV+ +
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILR-----EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 472
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ +E Q P V YN L+ G+ ++K +++A + +EM + + PN TYG ++G
Sbjct: 473 ILERMRE--QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 530
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV--------------- 198
Y + ++ A R EM G+ PN +Y +I+G + G E
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590
Query: 199 --------------SGMMERFLV----CEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
M E F + E G P TY SL+ G CK G+++ AS++L+
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M +G P TYN K G++E A NL+ + G TP+ +TY ++ CK
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
A Q+ +EM RG D ++++ C+ KF++A F++M+ +G ++F
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFN 769
Query: 359 RLNDEFKKRGMTALAQKLCNVM---SSVPRSM---ELLDSRCK 395
L + + K G A L M +P + L+D CK
Sbjct: 770 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 812
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 25/322 (7%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N + +F++L+DS K G + A F K + + P++ N LL + V
Sbjct: 149 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE--FRPSLLSCNSLLGDLLKGNKV- 205
Query: 127 DAERFWL---EMRKENVTPNVVTYGTLVEGYCRL-----------------RRVDRAIRL 166
E FW M V P+V TY ++ +C++ R +D AI L
Sbjct: 206 --ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIEL 263
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M +G+ P+ Y+ +I+G R E M+ + P +TY +L+ G+ +
Sbjct: 264 KRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR 323
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD+E A +I M++ G + +N K GK+E A+ + ++M+E G PD T
Sbjct: 324 QGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 383
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y +L++ C+ + A ++ EMK R + T +++I+ LCR +A +M+
Sbjct: 384 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 443
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
GL P+ + + L K G
Sbjct: 444 MNGLKPNAVVYTTLMTAHAKEG 465
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 82/211 (38%), Gaps = 23/211 (10%)
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
C P V + L+ Y K G L A + + F PS + N K KVE
Sbjct: 148 CNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 207
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDK-----------------LDLAIQVSKEM 310
++ M PD TY ++ CK LD AI++ + M
Sbjct: 208 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSM 267
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G DL T +LI+ C + EA +MI GL P +T+ L D F ++G
Sbjct: 268 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDI 327
Query: 371 ALAQKL------CNVMSSVPRSMELLDSRCK 395
A ++ C + +++ LL+ CK
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCK 358
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 157/303 (51%), Gaps = 3/303 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LC+ G ++ + R+ + P VY L+ + V+++
Sbjct: 428 YSVIINGLCRCGNLQGTNAIL--REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR++ + P+V Y +L+ G+C+ +R++ A + EM + + PNA Y IDG +AG
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E L C P + YT+L++G+CK G++ A + + ++SR L TY+
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
S+ GK+ +A ++ ++ E G P+ TY+ L+ CK+ +D A Q+ +EM +G
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF-KKRGMTALA 373
+ D+ T +LI LC+ + + A F+D+ RGL P+ +T+ + D + K + TA
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725
Query: 374 QKL 376
Q L
Sbjct: 726 QLL 728
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 171/343 (49%), Gaps = 8/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI + R G +E A F +MV ++ ++ LL+ +CK G+++ A E
Sbjct: 322 TYNALIDGFMRQGDIEQA-----FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ +++ P + Y++L+ G R +N+ A EM+K + P V+TY ++ G
Sbjct: 377 IMQEM--MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 434
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
CR + +++EM G++PNA+VY T++ + GR EE ++ER P
Sbjct: 435 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 494
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ Y SL+ G+CKA +E A L M+ R P+ TY F +SK G++E A +
Sbjct: 495 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 554
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M+ G P+ Y L++ CKE + A V + + R D+ T ++LIH L R
Sbjct: 555 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 614
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K EA F ++ +GL+P+ T+ L K+G A +L
Sbjct: 615 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 657
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 200/428 (46%), Gaps = 45/428 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KAK + A L++ + P+ T+ I Y++AG +E A F
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPN---AHTYGAFIDGYSKAGEMEIADRYFNEML 557
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ N ++ L++ CK+G V A F R L + V+ Y++L++G
Sbjct: 558 SCGVLPN----VGIYTALIEGHCKEGNVTEAFSVF--RFILSRRVLQDVQTYSVLIHGLS 611
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + +A + E++++ + PN TY +L+ G C+ VD+A +L++EM +GI P+ +
Sbjct: 612 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV 671
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +IDGL +AG E + + P VTY ++V GYCK+ + A ++L+ M
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Query: 241 ISRGFLPSPTTYNYFFRY----------------------------------FSKFGKVE 266
+ RG P YN + + K GK++
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQ 791
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A +L +MIE + P+ +TY L+ CK + A ++ EM+ R T T L+
Sbjct: 792 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 851
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN--VMSSVP 384
H + E SA FE+M+ +G+ P +T+ + D + + G A KL + ++ +P
Sbjct: 852 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMP 911
Query: 385 RSMELLDS 392
S+ D+
Sbjct: 912 MSVAAYDA 919
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 10/350 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +I + R M EA + E + + A + +D K G
Sbjct: 492 LPDVFCYNSLIIGFCKAKR--MEEARTYLMEM-----LERRLRPNAHTYGAFIDGYSKAG 544
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A YF++ L P V +Y L+ G + NV +A + + V +V T
Sbjct: 545 EMEIADRYFNEM--LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G R ++ A + E++++G+ PNA YN++I G + G ++ S ++E
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +VTY L+ G CKAG++E A + + RG P+ TY + K
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L +M+ G PD Y+++L CKE+K + A+ + +EM +G + +T LI
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNT-LI 781
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ K EA+ E+MI + +P+++T+ L D K GM A++L
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 831
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 193/400 (48%), Gaps = 19/400 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
L K + + W + D + H+V PD T+ +I + + G V+ A L+
Sbjct: 190 LLKGNKVELFW-KVFDGMCAHKVLPDVY---TYTNMISAHCKVGNVKDAKRVL-----LE 240
Query: 64 M-VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
M K + +++ LC+ + A E KR +D+ P + Y+IL+NG+
Sbjct: 241 MGEKGCSPNLVTYNVIIGGLCRARLLDEAIEL--KRSMVDKGLVPDLYTYDILINGFCME 298
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
K ++A+ LEM + P +TY L++G+ R +++A R+ EM GIE N I++
Sbjct: 299 KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW 358
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
NT+++G+ +AG+ E+ +M+ + P TY+ L++G+C+ ++ A ++L M
Sbjct: 359 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 418
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
R P+ TY+ + G ++ + R+M+ +G P+ + Y L+ KE +++
Sbjct: 419 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 478
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ + + M+ +G D+ LI C+ + +EA +M+ R L P+ T+ D
Sbjct: 479 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFID 538
Query: 363 EFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCKD 396
+ K G +A + C V+ +V L++ CK+
Sbjct: 539 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 578
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 157/337 (46%), Gaps = 40/337 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI +R G + A F ++ N A + L+ CKQG V AS+
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN----AFTYNSLISGSCKQGNVDKASQL 657
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P + YNIL++G ++ ++ A+ + ++ +TPN VTY +V+GY
Sbjct: 658 LEEM--CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 715
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYN------------------------------- 183
C+ + A +L++EM G+ P+A +YN
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV 775
Query: 184 ---TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
T+I+G ++G+ +E + ++E + + P VTYTSL+ CKAG + A ++ M
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
R +P+ TY + G + + L+ +M+ G PD++TY++++ C+E +
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
A ++ E+ +G + + LI LC+ +F E
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFE 932
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 179/403 (44%), Gaps = 50/403 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ ++I R G ++ +MV N A ++ L+ + K+GRV+ +
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILR-----EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ +E Q P V YN L+ G+ ++K +++A + +EM + + PN TYG ++G
Sbjct: 482 ILERMRE--QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV--------------- 198
Y + ++ A R EM G+ PN +Y +I+G + G E
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599
Query: 199 --------------SGMMERFLVC----EPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
M E F + E G P TY SL+ G CK G+++ AS++L+
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M +G P TYN K G++E A NL+ + G TP+ +TY ++ CK
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
A Q+ +EM RG D ++++ C+ KF++A F++M+ +G ++F
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFN 778
Query: 359 RLNDEFKKRGMTALAQKLCNVM---SSVPRSM---ELLDSRCK 395
L + + K G A L M +P + L+D CK
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 16/298 (5%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N + +F++L+DS K G + A F K + + P++ N LL + V
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE--FRPSLLSCNSLLGDLLKGNKV- 196
Query: 127 DAERFWL---EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
E FW M V P+V TY ++ +C++ V A R++ EM ++G PN + YN
Sbjct: 197 --ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYN 254
Query: 184 TVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+I GL A +E M+++ LV P + TY L+ G+C A +L
Sbjct: 255 VIIGGLCRARLLDEAIELKRSMVDKGLV----PDLYTYDILINGFCMEKRSREAKLMLLE 310
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI G P P TYN F + G +E A + +M+ G + + ++ LL +CK K
Sbjct: 311 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 370
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++ A+++ +EM +G + D T ++LI CR A ++M +R L P LT+
Sbjct: 371 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 10/310 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA E + A L D G P+ V T+ ++ Y ++ AA E
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCV---TYAAMVDGYCKSKNPTAAFQLLEEM- 731
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ A ++ ++L+ CK+ + + A + F + L++ +A TV +N L+ G+
Sbjct: 732 ---LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM--LEKGFASTVS-FNTLIEGYC 785
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S +++A EM ++ PN VTY +L++ C+ + A RL EM++ + P A
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +++ G G EVS + E + P +TY ++ YC+ G++ A K+ +
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G S Y+ + K + + + L ++ ESG+ T ++ + +
Sbjct: 906 LVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNM 965
Query: 301 DLAIQVSKEM 310
D A +V + M
Sbjct: 966 DEAAEVLRSM 975
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K F S S F L++ CK G+++ A+ + +++ + P Y L++ ++ +
Sbjct: 769 KGFASTVS-FNTLIEGYCKSGKLQEANHLLEEM--IEKQFIPNHVTYTSLIDHNCKAGMM 825
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A+R WLEM++ NV P TY +L+ GY + + L +EM +GIEP+ + Y +
Sbjct: 826 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 885
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
ID G E + + LV ++ Y +L++ CK + K+L + GF
Sbjct: 886 IDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGF 945
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
T + R F G +++A + R M++ G+ +
Sbjct: 946 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 10/251 (3%)
Query: 155 CRLRRVDRAI----RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
C +R D + +VK R PN+++++ ++D + G E + E
Sbjct: 117 CIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEF 176
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P++++ SL+ K +E K+ M + LP TY K G V+DA
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ +M E G +P+ +TY++++ LC+ LD AI++ + M +G DL T +LI+ C
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVP 384
+ EA +MI GL P +T+ L D F ++G A ++ C + +++
Sbjct: 297 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 356
Query: 385 RSMELLDSRCK 395
LL+ CK
Sbjct: 357 IWNTLLNGVCK 367
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 9/369 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
VS F +LI + GM+ A F+ N + ++ L+ C +G V
Sbjct: 253 VSVYVFTVLIDGLCKNGMLVEAREMFDEMVN----RGYEPNIVTCTALMGGYCLKGNVDM 308
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E F E + V YN+ ++G+ + V+DA R + EM +E V PN+VTY +L
Sbjct: 309 ARELFDAIGE--WGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++ C+ V A +VK M + G+ P+ + ++DGL ++ R ++ + + +
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + +YT L+ G C + + A +L+ M + +P TY+ + G++ +A
Sbjct: 427 TPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWR 486
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M G PD +TY ILL L K+ LD A+ + +M RG + D+ T++I C
Sbjct: 487 LLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYC 546
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV---PRSM 387
+ + DEA F +M + LVP +T+ L + K G + K NV+ + PR +
Sbjct: 547 KSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVL 606
Query: 388 ELLDSRCKD 396
+ L + CK
Sbjct: 607 KYLAALCKS 615
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 11/323 (3%)
Query: 44 ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH-----KR 98
G+++A + E NN F + IL++ LC+ GRV A K
Sbjct: 119 VNGGVLKALEFHDEIVNN-----GFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKE 173
Query: 99 KELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
KE D + V +Y+I+++ R+ V + F+ EM V PN TYG+L+ G C +
Sbjct: 174 KEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGV 233
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+ LV EM + G++ + V+ +IDGL + G E M + + P +VT
Sbjct: 234 GKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTC 293
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T+L+ GYC G+++ A ++ + GF TYN F + K G+V DA+ ++ +M
Sbjct: 294 TALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCR 353
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G P+ +TY+ L+ LCK ++ A ++ K M G D+ T +L+ LC+ + D+
Sbjct: 354 EGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQ 413
Query: 338 ASAEFEDMIRRGLVPHYLTFKRL 360
A F ++ GL P ++ L
Sbjct: 414 AILLFNQLVESGLTPDVWSYTIL 436
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 14/312 (4%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K L + + N +L G + V A F E+ + N V+YG L+ G C
Sbjct: 97 KILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENG 156
Query: 159 RVDRAIRLVKEMRKEG--------IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
RV+ A+ L++ + KE ++ N ++Y+ VID L G +E +
Sbjct: 157 RVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGV 216
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TY SL++G C G ++ MI RG S + K G + +A
Sbjct: 217 CPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEARE 276
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ +M+ GY P+ +T L+ C + +D+A ++ + G D+ T + IH C
Sbjct: 277 MFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYC 336
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVP 384
++ + +A F++M R G+VP+ +T+ L D K G + A ++ M +
Sbjct: 337 KVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIV 396
Query: 385 RSMELLDSRCKD 396
LLD CK
Sbjct: 397 TCCILLDGLCKS 408
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 193/430 (44%), Gaps = 58/430 (13%)
Query: 1 MIKVLAKAKEFDSAW------CLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIW 54
++ L KA E ++ CL G +PD F +I + + + AI
Sbjct: 227 LLSSLVKANELKKSYEVYDFICL------GGIIPDV---HLFSTMINAFCKGHREDDAIG 277
Query: 55 TFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNI 114
F L + N + + ++ LCK GR+ A Y K K + + +P++ Y++
Sbjct: 278 LFSKMEKLGVAPNVVT----YNNIIHGLCKSGRLDEA--YRFKEKMVKEKVSPSLITYSV 331
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+NG + + + +A EM + PN V Y TL++GYC++ + A+++ +M +G
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMME----RFLVCEPG------------------- 211
I PN++ N++I G ++ + + ++E R L G
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTAL 451
Query: 212 ------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
P T+LV G CKAG A ++ ++ +GF+P+ T N
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGL 511
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K G +++ + L R M+E G DR+TY+ L+ CKE K+ ++ +EM +G D+
Sbjct: 512 CKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI 571
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
T +L+H LC K DEAS + + + G VP+ T+ + D + K + L N
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631
Query: 380 MSSVPRSMEL 389
+ V + +EL
Sbjct: 632 L--VSKKLEL 639
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 53/359 (14%)
Query: 6 AKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV 65
K E WC LL G VP+ V+ + LI +AG ++ + DM+
Sbjct: 480 GKQGEAVELWCRLL---GKGFVPNIVTSNA---LIHGLCKAGNMQETLKLLR-----DML 528
Query: 66 KN---FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+ FD + L+ CK+G+VK E K + + + P + +N+LL+G +
Sbjct: 529 ERGLVFDRIT--YNTLISGCCKEGKVKEGFEL--KEEMVKKGIQPDIYTFNLLLHGLCNA 584
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ +A R W E +K PNV TYG +++GYC+ +V+ L+ E+ + +E N++VY
Sbjct: 585 DKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVY 644
Query: 183 NTVI-----------------------------------DGLVEAGRFEEVSGMMERFLV 207
N++I GL G ++ +++
Sbjct: 645 NSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK 704
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +V YT+++ GY K G + + +L+ M S P+ TY F K GK ++
Sbjct: 705 EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKE 764
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L +M E G PD +TY+ LCKE K++ A +V EM +D T T LI
Sbjct: 765 AAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 132/247 (53%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+++ LL+ ++ +K + + + + P+V + T++ +C+ R D AI L
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M K G+ PN + YN +I GL ++GR +E E+ + + P+++TY+ + G K
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
++ A+ +LK M GF+P+ YN + K G + +A+ + M+ G +P+ +T
Sbjct: 339 LEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L++ CK D++ A V +EM RG I+ + +M+I+ LC ++F A +M+
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458
Query: 347 RRGLVPH 353
R L P+
Sbjct: 459 LRNLRPN 465
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 2/305 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ LCK G ++ + R L++ YN L++G + VK+ EM K
Sbjct: 507 LIHGLCKAGNMQETLKLL--RDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + P++ T+ L+ G C ++D A RL E +K G PN Y +IDG +A + EE
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEE 624
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++ + + V Y SL++ YC G++ A ++ M SRG L S TY+
Sbjct: 625 GENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMH 684
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
G V+DA +L +M + G P+ + Y ++ K +++ V +EM
Sbjct: 685 GLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHP 744
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T T++I C++ K EA+ +M +G++P +T+ + K G A K+C
Sbjct: 745 NKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVC 804
Query: 378 NVMSS 382
+ MSS
Sbjct: 805 DEMSS 809
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 148/308 (48%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++++ LC + R A + R+ L ++ P + L++G ++ +A W
Sbjct: 434 FSMVINWLCLKFRFVTALHFI--REMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCR 491
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + PN+VT L+ G C+ + ++L+++M + G+ + I YNT+I G + G+
Sbjct: 492 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P + T+ L+ G C A ++ AS++ G++P+ TY
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K KVE+ NL +++ + + Y+ L++ C ++ A ++ +MK RG
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T + L+H LC + D+A ++M + GL+P+ + + + + K G
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731
Query: 375 KLCNVMSS 382
+ MSS
Sbjct: 732 IVLQEMSS 739
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 111/223 (49%), Gaps = 1/223 (0%)
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A+ F L + K+ + P++ T L+ + + ++ + + GI P+ +++T+I+
Sbjct: 206 ADVFSL-LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
+ R ++ G+ + P +VTY +++ G CK+G L+ A + + M+ P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
S TY+ F K K+++A + ++M E G+ P+ + Y+ L+ CK + A+++
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+M +G + T LI C+ + +A E+MI RGL
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL 427
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 14/235 (5%)
Query: 137 KENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEA- 192
K NV P + + V C+ R R+ ++ + + + P ++ +IDG V A
Sbjct: 95 KSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAF 154
Query: 193 ------GRFEEVSGMMERF-LVCEPGPTMVTYTSLVKGYCKAGDLEG---ASKILKMMIS 242
R E++ +M F LV EP + LV Y G A+ + ++
Sbjct: 155 YARNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAK 214
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+G PS T + K +++ + +Y + G PD + ++ CK + D
Sbjct: 215 KGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDD 274
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
AI + +M+ G ++ T +IH LC+ + DEA E M++ + P +T+
Sbjct: 275 AIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITY 329
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 41/185 (22%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LIR Y G + AA F +++ S A+ + L+ LC G V A +
Sbjct: 647 LIRAYCINGNMNAA---FRLRDDMKSRGVLLSCAT-YSSLMHGLCNIGLVDDAKHLLDEM 702
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
++ + P V Y ++ G+ + + EM N+ PN TY +++G+C+L
Sbjct: 703 RK--EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYN----------------------------------- 183
+ A +L+ EM ++GI P+A+ YN
Sbjct: 761 KTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYT 820
Query: 184 TVIDG 188
T+IDG
Sbjct: 821 TLIDG 825
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 174/336 (51%), Gaps = 8/336 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+K T+ ILIR ++ AG ++ AI E + F+ A + L+ LC GRV A
Sbjct: 56 NKFTYGILIRGFSSAGDLDIAIQLLEEMKS----SGFEGNAVVHTTLMKGLCDAGRVVEA 111
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E+F + + + AP V Y L++ ++ +A+ EM + P+ VT+ TL+
Sbjct: 112 LEHF---RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLI 168
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP- 210
+G C+ ++A R+++++ + G+ + + T+I L E++ + ++ +
Sbjct: 169 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 228
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT++ + ++ G+CKA DL+ A K+L++MI +G +P+ T+ K +V +A
Sbjct: 229 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 288
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L KM+ G +P+ +TY ++ LCK+ ++D A ++ + M+ R C ++ T +LI LC
Sbjct: 289 LLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 348
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ + +EA + M G P +T+ L D K
Sbjct: 349 KAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 191/455 (41%), Gaps = 82/455 (18%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA +FD A +L + + PD V TF LI + G E A E
Sbjct: 132 LVHALCKAGKFDEAQGMLREMVAQGCAPDTV---TFSTLIDGLCKFGSEEQAFRVLE--- 185
Query: 61 NLDMV-KNFDSGASLFEILLDSLC-KQGRVKAASEY----------------------FH 96
D++ + + + FE ++ LC K V+ AS+ F
Sbjct: 186 --DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 97 KRKELDQSW-----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
K K+LD ++ P V + IL+ G ++ V +A++ +M +PNVV
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY T++ G C+ +VD A L + M + PN + +N +IDGL +A R EE + R
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF-LPSPTTYNYFFRYFSKFGK 264
P ++TY SL+ G CK+ ++ A ++ + + G + TY+ F ++ G+
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK------------------------- 299
+ DA ++ +++ G++PD TY L+ CK +
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483
Query: 300 ----------LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI--- 346
+ AIQ+ M RGC D +++ + R K D+A A E +I
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKR 543
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
R P L + + G T A++L + MS
Sbjct: 544 DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMS 578
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 157/324 (48%), Gaps = 10/324 (3%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
LD LC+ R + A F R + + P Y IL+ G+ + ++ A + EM+
Sbjct: 29 LDMLCRLNRRQEALALF--RNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSS 86
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
N V + TL++G C RV A+ + M K+ P+ + Y ++ L +AG+F+E
Sbjct: 87 GFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEA 145
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF-R 257
GM+ + P VT+++L+ G CK G E A ++L+ +I RG S + R
Sbjct: 146 QGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQR 205
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+K+ VE A + +I G+TP L +++++ CK LD A ++ + M +GC
Sbjct: 206 LCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVP 265
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T T+LI LC+ + EA E M+ G P+ +T+ + + K+G A +L
Sbjct: 266 NVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELF 325
Query: 378 NVMS------SVPRSMELLDSRCK 395
+M +V L+D CK
Sbjct: 326 QLMERRNCPPNVVTHNILIDGLCK 349
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 176/434 (40%), Gaps = 83/434 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA A LL + G P+ V T+ +I + G V+ A F+
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVV---TYSTVINGLCKQGQVDDAYELFQLME 329
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+N IL+D LCK R++ A + +H+ +E AP + YN L++G
Sbjct: 330 R----RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE--TGCAPDIITYNSLIDGLC 383
Query: 121 RSKNV------------------------------------KDAERFWLEMRKENVTPNV 144
+S V DA R + + + +P++
Sbjct: 384 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 443
Query: 145 VTYGTLVEGYCRLRRV-----------------------------------DRAIRLVKE 169
TY +L+ YC+ R +RAI+L
Sbjct: 444 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 503
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP---GPTMVTYTSLVKGYCK 226
M G +A++YN V++G+ A + ++ ++E+ + P+ +LV+ C+
Sbjct: 504 MAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 563
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++L M RGF + ++YN S+ + ++A ++ M+ +G P+ T
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
++++ LC K+D A ++ + M GC D++T LI C+ + D A E+M
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 683
Query: 347 RRGLVPHYLTFKRL 360
GL P+ T L
Sbjct: 684 EAGLEPNDTTHDLL 697
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N N +D L R +E + + P TY L++G+ AGDL+ A ++L
Sbjct: 21 NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M S GF + + + G+V +A+ +R M + PD +TY L+ LCK
Sbjct: 81 EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKA 139
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K D A + +EM +GC D T + LI LC+ ++A ED+I+RG+ F
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
+ + Q+LCN +SV + ++L
Sbjct: 200 E------------TIIQRLCNKYNSVELASKVL 220
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 170/356 (47%), Gaps = 17/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I V ++ D A D VPD V + ILI Y R GM+ A+ +
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNV---IYTILINGYCRNGMMSEALEIRD--- 384
Query: 61 NLDMVKNFDSGASL----FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
K + G +L + +L+ LCK+ + A+ F + E + P + L+
Sbjct: 385 -----KMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE--RGVVPDFCTFTTLI 437
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G + N+ A + M ++N+ P++VTY L++G+C+ +++A L EM I
Sbjct: 438 HGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIF 497
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN I Y +++G G E + + + PT+VT +++KGYC++GDL A +
Sbjct: 498 PNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEF 557
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MIS G P TYN F K ++ A L KM G PD +TY+++L C+
Sbjct: 558 LGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCR 617
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ ++ A + ++M RG D D T T LI+ EA ++M++RG VP
Sbjct: 618 QGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 8/348 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +LIR Y +A + TF+ K F + LL L K G V A E +
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRR----KGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 96 HKRKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ E+ +S V NI++N + + D + F ++M ++ + ++VTY TL+ Y
Sbjct: 174 N---EIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAY 230
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR + A ++ M +G++P YN VI+GL + GR+ G+ L P
Sbjct: 231 CREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDT 290
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY +L+ C+ + A I M+ RG P +++ S+ G ++ A+ +R
Sbjct: 291 TTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRD 350
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M SG PD + Y IL+ C+ + A+++ +M +GC +D+ +++ LC+
Sbjct: 351 MKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKL 410
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+A+A F++M+ RG+VP + TF L K G A L +M+
Sbjct: 411 LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQ 458
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 162/333 (48%), Gaps = 9/333 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD +S F LI +R G ++ A+ F +V + ++ IL++ C+ G
Sbjct: 323 PDLIS---FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD----NVIYTILINGYCRNGM 375
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E + K L+Q A V YN +LNG + K + DA + EM + V P+ T+
Sbjct: 376 MSEALEI--RDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF 433
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C+ + +A+ L M ++ I+P+ + YN +IDG + E+ + + +
Sbjct: 434 TTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMIS 493
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+ P ++Y LV GYC G + A ++ MI +G P+ T N + + + G +
Sbjct: 494 RKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSK 553
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A KMI G PD +TY+ L+ K + +D A + +M+ +G D+ T ++++
Sbjct: 554 ADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILN 613
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
CR + EA MI RG+ P T+ L
Sbjct: 614 GFCRQGRMQEAELILRKMIERGIDPDRSTYTTL 646
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 9/279 (3%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K K A L + + VPDF TF LI + + G + A+ F
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFC---TFTTLIHGHCKEGNMGKALSLFGIMTQ--- 458
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
KN + IL+D CK ++ A+E +++ + + P Y IL+NG+
Sbjct: 459 -KNIKPDIVTYNILIDGFCKTTEMEKANELWNEM--ISRKIFPNHISYAILVNGYCNLGF 515
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V +A R W EM ++ + P +VT T+++GYCR + +A + +M EG+ P++I YNT
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+G V+ ++ ++ + P +VTY ++ G+C+ G ++ A IL+ MI RG
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
P +TY + +++A + +M++ G+ PD
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 169/356 (47%), Gaps = 9/356 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K + D L+D D V+ +T LI Y R G++ A FE N
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNT---LINAYCREGLLGEA---FEVMN 244
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ K + +++ LCK+GR A F++ L +P YN LL
Sbjct: 245 SMSG-KGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM--LSIGLSPDTTTYNTLLVESC 301
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ N +A+ + +M V+P+++++ +L+ R +D+A+ ++M+ G+ P+ +
Sbjct: 302 RNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV 361
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y +I+G G E + ++ L +V Y +++ G CK L A+ + M
Sbjct: 362 IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM 421
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG +P T+ K G + A++L+ M + PD +TY+IL+ CK ++
Sbjct: 422 VERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEM 481
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ A ++ EM R + + +L++ C + EA +++MIR+G+ P +T
Sbjct: 482 EKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVT 537
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I++++LCK ++ + ++ + + YN L+N + R + +A
Sbjct: 188 LNIMVNALCKDHKIDDVKPFLIDMEQ--KGIFADIVTYNTLINAYCREGLLGEAFEVMNS 245
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P + TY ++ G C+ R RA + EM G+ P+ YNT++
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F E + L P +++++SL+ + G L+ A + M + G +P Y
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + G + +A+ + KM+E G D + Y+ +L LCK+ L A + EM RG
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T LIH C+ +A + F M ++ + P +T+ L D F K A
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKAN 485
Query: 375 KLCNVMSS 382
+L N M S
Sbjct: 486 ELWNEMIS 493
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 2/193 (1%)
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R E V ++ C G + + L++ Y +A L + K++ +GFL S N
Sbjct: 97 RVEIVESLISMSSTC--GVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACN 154
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G V+ A +Y ++ SG + T +I++ LCK+ K+D +M+ +
Sbjct: 155 SLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQK 214
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D+ T LI+ CR EA M +GL P T+ + + K+G A
Sbjct: 215 GIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRA 274
Query: 374 QKLCNVMSSVPRS 386
+ + N M S+ S
Sbjct: 275 KGVFNEMLSIGLS 287
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 182/382 (47%), Gaps = 29/382 (7%)
Query: 5 LAKAKEFDSA--WCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+AK K++ SA C +D G H V + +LI R V+ A+
Sbjct: 106 IAKKKQYSSAVSLCNQMDLFGVTHNVY------SLNVLINCLCRLSHVDFAVSV------ 153
Query: 62 LDMVKNFDSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA---PTVRVYNI 114
M K F G A F L++ LC +G++K A F+ + W+ P V YN
Sbjct: 154 --MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFN-----EMVWSGHEPNVISYNT 206
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
++NG ++ N A R + +M + PNVVTY T+++ C+ R V+ A+ + EM G
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I P+ + YNT++ G G+ E + + + + P VT+ LV G CK G + A
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ + M +G P+ TYN + ++++A+ + MI G P+ +Y+IL+
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CK +++ A ++ EM + D T + L+ LC++ + EA F++M GL+P
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
+ + L D F K G A KL
Sbjct: 447 MAYSILLDGFCKHGHLDEALKL 468
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 161/334 (48%), Gaps = 11/334 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD + TF LI G ++ A+ F +MV + + +++ LCK G
Sbjct: 164 PDAI---TFNTLINGLCNEGKIKEAVGLFN-----EMVWSGHEPNVISYNTVINGLCKNG 215
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
A F K ++ P V YN +++ + + V +A F EM + P+VVT
Sbjct: 216 NTIMAVRVFRKMEQ--NRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ G+C L +++ A RL KEM + P+ + +N ++DGL + G E + E
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TY +L+ GYC ++ A K+L +MI +G P+ ++YN + K ++
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L +M E TPD +TY L++ LC+ + A+ + KEM G DL ++L+
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C+ DEA ++M R + P+ + + L
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTIL 487
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 160/319 (50%), Gaps = 9/319 (2%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ + A L + +G + +PD V TF IL+ + GMV A E K +
Sbjct: 286 QLNEATRLFKEMVGRNVMPDTV---TFNILVDGLCKEGMVSEARCVSETMTE----KGAE 338
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A + L+D C ++ A + + + AP + YNIL+NG+ +SK + +A+
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIM--IGKGCAPNLSSYNILINGYCKSKRMNEAK 396
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
R EM ++N+TP+ VTY TL++G C++ R A+ L KEM G+ P+ + Y+ ++DG
Sbjct: 397 RLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGF 456
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G +E +++ P ++ YT L++G AG LE A ++ + + G P
Sbjct: 457 CKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDI 516
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN + K G ++A +RKM + G+ PD +Y+++++ + AIQ+ E
Sbjct: 517 WTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDE 576
Query: 310 MKCRGCDIDLDTSTMLIHL 328
M + D T ML+ L
Sbjct: 577 MVGKRFSADSSTFQMLLDL 595
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 129/274 (47%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+V + L + K A +M VT NV + L+ CRL VD A+ +
Sbjct: 94 PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K GI+P+AI +NT+I+GL G+ +E G+ + P +++Y +++ G CK
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ A ++ + M P+ TYN K V +A+ +M++ G PD +T
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ +L C +L+ A ++ KEM R D T +L+ LC+ EA E M
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G P+ T+ L D + A K+ +M
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM 367
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 148/306 (48%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L C G++ A+ F ++ + ++ P +NIL++G + V +A
Sbjct: 274 YNTILHGFCSLGQLNEATRLF--KEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSET 331
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ PN TY L++GYC ++D AI+++ M +G PN YN +I+G ++ R
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ P VTY++L++G C+ G A + K M S G LP Y+
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G +++A+ L ++M E P+ + Y IL++ + KL++A ++ ++ G
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T ++I L + DEA F M G +P ++ + F + ++ A
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAI 571
Query: 375 KLCNVM 380
+L + M
Sbjct: 572 QLIDEM 577
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ DA + M + N P+VV +G + + ++ A+ L +M G+ N N
Sbjct: 76 SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I+ L + +M + P +T+ +L+ G C G ++ A + M+
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P+ +YN K G A+ ++RKM ++ P+ +TY+ ++ LCK+ ++ A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ EM RG D+ T ++H C + + +EA+ F++M+ R ++P +TF L D
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 364 FKKRGMTALAQKLCNVMS 381
K GM + A+ + M+
Sbjct: 316 LCKEGMVSEARCVSETMT 333
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 184/368 (50%), Gaps = 14/368 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L KA++F S L+ + G E + D F I I+ +A AG ++ A+ FE
Sbjct: 227 MVHILGKARQFQSMVALIQEM--GKE--GALCMDAFKIAIKSFAAAGEIKNAVGVFEMMR 282
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
FD G F LL +L ++G + A++ F + ++ +AP +R Y L+ W
Sbjct: 283 ----THGFDDGVESFNCLLVALAQEGLGREANQVFDRMRD---RYAPDLRSYTALMLAWC 335
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++N+ +A R W EM + + P+VV + T++EG R +R A+++ + M+ +G PN
Sbjct: 336 NARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVW 395
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I + G+ + E P + TYT L+ GY A ++ + +L+ M
Sbjct: 396 TYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEM 455
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK--ILCKED 298
+G P TYN + + +DA +Y+KMI+ G P TY++++K L +
Sbjct: 456 TQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRN 515
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ + V +EM +G D+++ T+ I+ R + +EA E+MI++G+ + +
Sbjct: 516 YM-MGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
Query: 359 RLNDEFKK 366
+ +F K
Sbjct: 575 KFAADFSK 582
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++ + + A+ + + MR G + +N ++ L + G E + + +R +
Sbjct: 262 IKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDR-MRDRY 320
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + +YT+L+ +C A +L A ++ M+ G P +N + + +A+
Sbjct: 321 APDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVK 380
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ M G P+ TY +L++ CK K+D+A++ +EM+ GC D+ T T L+
Sbjct: 381 MFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYG 440
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ D +A E+M ++G P T+ L R M A ++
Sbjct: 441 NAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARI 486
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 191/393 (48%), Gaps = 22/393 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA- 59
++K+LA+++ F S ++L+ + E+ +++ I+I+ Y+ +G+VE A+ + F
Sbjct: 100 LLKLLARSRVF-SEMEVVLENMRVEEMSP--TREAMSIVIQAYSDSGLVEKALELYYFVL 156
Query: 60 ----------------NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ 103
N L + + I++ LCK+G+++ + R Q
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDR--WGQ 214
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
P + YN L++G+ + +++ A ++E++ + P V TYG ++ G+C+
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 274
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
RL+ EM G+ N VYNT+ID + G + +E + C P +VTY +L+ G
Sbjct: 275 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 334
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
C+ G + A ++L+ + +G +P+ +Y + K G + A N +M E G+ PD
Sbjct: 335 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 394
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+TY L+ L ++D+A+ + ++M RG D +L+ LC+ +K A
Sbjct: 395 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 454
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+M+ + ++P + L D F + G A+KL
Sbjct: 455 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 487
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 145/307 (47%), Gaps = 2/307 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+D CK+G ++ A+ F + K + + PTV Y ++NG+ + + K +R +
Sbjct: 222 FYNTLIDGYCKKGDMEMANGLFIELKL--KGFLPTVETYGAIINGFCKKGDFKAIDRLLM 279
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM +T NV Y T+++ + + +A+ ++ M + G +P+ + YNT+I G G
Sbjct: 280 EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDG 339
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E ++E+ L P +YT L+ YCK G + AS L M RG P TY
Sbjct: 340 KVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYG 399
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
G+V+ A+ + KM+E G PD Y+IL+ LCK+ KL A + EM +
Sbjct: 400 ALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 459
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D L+ R DEA FE I +G+ P + + + + K GM A
Sbjct: 460 SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDA 519
Query: 374 QKLCNVM 380
N M
Sbjct: 520 MACINRM 526
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 159/391 (40%), Gaps = 46/391 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K L K + + L+ D+ G +P+ + +T LI Y + G E AN
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNT---LIDGYCKKG-------DMEMAN 240
Query: 61 NLDM---VKNFDSGASLFEILLDSLCKQGRVKAAS------------------------- 92
L + +K F + +++ CK+G KA
Sbjct: 241 GLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDAR 300
Query: 93 -EYFHKRKELDQ-------SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
++ H K ++ P + YN L++G R V +A++ + + + PN
Sbjct: 301 YKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNK 360
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+Y L+ YC+ DRA + EM + G +P+ + Y ++ GLV AG + + E+
Sbjct: 361 FSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREK 420
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L P Y L+ G CK L A +L M+ + LP Y F + G
Sbjct: 421 MLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGN 480
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+++A L+ IE G P + Y+ ++K CK + A+ MK R D T +
Sbjct: 481 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 540
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+I + + D A F +M++ P+ +
Sbjct: 541 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N Y++++ L + F E+ ++E V E PT + +++ Y +G +E A ++
Sbjct: 93 NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152
Query: 238 KMMI-SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
++ + + P N K G++E A R I++K LCK
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA---------------RKFTCIMVKGLCK 197
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E KL+ ++ ++ +GC ++ LI C+ + A+ F ++ +G +P T
Sbjct: 198 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 257
Query: 357 FKRLNDEFKKRG 368
+ + + F K+G
Sbjct: 258 YGAIINGFCKKG 269
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 162/349 (46%), Gaps = 10/349 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ LI + G V+ A+ F DM + L+ LC R +
Sbjct: 201 SYAALIEGFCETGRVDEALELFRELEQPDMYTH--------AALVKGLCDARRGEEGLYM 252
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K KEL W P R Y L++ W R + ++AE+ EM + P VT +V Y
Sbjct: 253 LQKMKEL--GWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAY 310
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR R+ A+R+ + M+ +G EPN YN ++ G G+ + ++++ C P +
Sbjct: 311 CREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L++G C G +E A ++L++M G TYN K GKV++A +L+
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G P+ +T++ ++ LCK K D+A ++M GC D T + I LC+
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
E + ++M+++ + P + + + D K LA ++ M S+
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 171/369 (46%), Gaps = 44/369 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+ ++R + + F A+ +GA+ + L+ +LC++ ++ A Y
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLF--AHMYHHGPPAPTGAT-YNALIRALCRRADLRHAQRY 151
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ W P +N L+ G+ R++ + A+ + +M + + V+Y L+EG+
Sbjct: 152 LSLM--VRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGF 209
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF--LVCEPG- 211
C RVD A+ L +E+ +P+ + ++ GL +A R EE M+++ L P
Sbjct: 210 CETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPAT 265
Query: 212 --------------------------------PTMVTYTSLVKGYCKAGDLEGASKILKM 239
P VT T++V YC+ G + GA ++ +
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G P+ TYN + F GKV AM L +M E G PD +TY++L++ C +
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A ++ + M+ G D T +LI LC+ K DEA + F+ + RG+ P+ +TF
Sbjct: 386 IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT 445
Query: 360 LNDEFKKRG 368
+ + K G
Sbjct: 446 VINGLCKGG 454
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 143/320 (44%), Gaps = 6/320 (1%)
Query: 68 FDSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
FD+G A ++++ C++GR+ A F K + P V YN ++ G+
Sbjct: 292 FDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKL--KGCEPNVWTYNAMVQGFCNVG 349
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V A +MR+ V P+VVTY L+ G C ++ A RL++ M G+ + YN
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYN 409
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+ID L + G+ +E + + P VT+ +++ G CK G + A L+ M+S
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TY+ F K + ++ +M++ P + Y I++ L KE LA
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ +M GC D+ T T + C + EA +M + G++ + + L D
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589
Query: 364 FKKRGMTALAQKLCNVMSSV 383
G T A + M+ V
Sbjct: 590 HTSIGKTDHAVTILKHMTGV 609
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 151/400 (37%), Gaps = 60/400 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LIR G +E+A + + +L+D+LCK G+
Sbjct: 368 PDVV---TYNLLIRGQCIDGHIESAFRLLRLMEG----NGLAADQYTYNVLIDALCKTGK 420
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A F + + P +N ++NG + A F +M P+ TY
Sbjct: 421 VDEACSLFDGLEY--RGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTY 478
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+E C+ + + + EM ++ ++P+ + Y VID L + + + + + +
Sbjct: 479 SPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVS 538
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTYT+ V+ YC G L A ++ M G + YN + GK +
Sbjct: 539 LGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDH 598
Query: 268 AMNLYRKMIESGYTPDRLTYHI-------------------------------------- 289
A+ + + M P+ T+ I
Sbjct: 599 AVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMK 658
Query: 290 -------------LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+L+ +E +LD + MK ++ D T L++ C++ +
Sbjct: 659 KNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYP 718
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+A A MI G +P+ ++++ L F G A+++
Sbjct: 719 DAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEI 758
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 145/372 (38%), Gaps = 67/372 (18%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTFEF 58
+I L K +FD A L + PD + F+ + + +R G+ F
Sbjct: 446 VINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL--------SF 497
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + + K+ + I++D L K+ A+ + + L S P V Y +
Sbjct: 498 IDEM-LQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS--PDVVTYTTSVRA 554
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-------- 170
+ + +AE +EM+K + + + Y TL++G+ + + D A+ ++K M
Sbjct: 555 YCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN 614
Query: 171 -------------------------------------------RKEGIEPNAIVYNTVID 187
+K + +A Y +++
Sbjct: 615 HFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILE 674
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G E R +EV+ ++ + YTSLV +CK A +L MI GFLP
Sbjct: 675 GFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLP 734
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA---I 304
+ +Y Y F+ G+ + A ++R + Y D + + I++ L ++ D+ I
Sbjct: 735 NLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMI 794
Query: 305 QVSKEMKCRGCD 316
+ ++MKC+ D
Sbjct: 795 SILEQMKCKPSD 806
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT TY +L++ C+ DL A + L +M+ G+ P T+N + + +++ A
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQ 184
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ KM G++ D ++Y L++ C+ ++D A+++ +E++ D+ T L+ L
Sbjct: 185 DLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGL 240
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C + +E + M G P + L D + + A+K+ N M
Sbjct: 241 CDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEM 291
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 59/145 (40%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ R Y +L G+ + + + M+++++ N Y +LV +C+LR A L+
Sbjct: 665 SARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALL 724
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
M G PN I Y ++ G G+ + + E + + ++ G +
Sbjct: 725 CSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQ 784
Query: 228 GDLEGASKILKMMISRGFLPSPTTY 252
G + ++ ++ PS TY
Sbjct: 785 GHPDMCHDMISILEQMKCKPSDETY 809
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 172/344 (50%), Gaps = 7/344 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ + + G + A+ + + K + LL+ L +G+VKAAS
Sbjct: 636 TYTILLDGFCKRGKIVPALILLQMM----LEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 691
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + +A + YN ++NG+ + + + ER M + V P+ +Y L+ GY
Sbjct: 692 FQEIICKEGLYADCI-AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 750
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
+ ++ R + L ++M KEGI+P+ + Y +I GL E G E +E+ ++ E G P
Sbjct: 751 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQP 810
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
Y +L+ C+ GD++GA ++ + M + G +PS + R K GKVE+A+ ++
Sbjct: 811 KHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVF 870
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++ +G P T+ L+ LCKE K+D A + + M+ G +D+ T +LI LC
Sbjct: 871 SSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNK 930
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+A +E+M +GL+P+ T+ L G +KL
Sbjct: 931 KCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKL 974
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 185/419 (44%), Gaps = 66/419 (15%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFE 76
+L K+ +P+ V+ +T ++ Y + G ++A+ + DM KN ++ +
Sbjct: 252 MLQKMKNCRLPNAVTYNT---ILNWYVKKGRCKSALRILD-----DMEKNGIEADLYTYN 303
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I++D LCK R +A Y ++ + + P YN L++G+F + A + +M
Sbjct: 304 IMIDKLCKLKR--SARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR--------------------KEGIE 176
++++ P+V TY L++GYCR R D A R++ EM+ +GI+
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGID 421
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ I Y+ +I+G+ + G E ++ R P V YT+LV +CKAG + A K
Sbjct: 422 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 481
Query: 237 LKMMISRGFLPSPTTYN----------------YFFRYFSKF------------------ 262
+ G + + +N F +Y S+
Sbjct: 482 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 541
Query: 263 -GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G V +A ++Y M+ G+ PD TY LL+ LC+ L A + + + C ID T
Sbjct: 542 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 601
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
L+ +C+ DEA E M+ R ++P T+ L D F KRG A L +M
Sbjct: 602 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMM 660
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 151/342 (44%), Gaps = 21/342 (6%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVY 112
+W F +LD + F + I+L+SLC QG++ A K K P Y
Sbjct: 214 VWLF-LKESLD--RKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK---NCRLPNAVTY 267
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N +LN + + K A R +M K + ++ TY +++ C+L+R RA L+K MR+
Sbjct: 268 NTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMRE 327
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+ P+ YNT+I G G+ + + L P++ TYT+L+ GYC+ G +
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE 387
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A ++L M G P +V A + + M+ G PD +TY L+
Sbjct: 388 ARRVLYEMQITGVRPR---------------EVSKAKQILKCMLADGIDPDVITYSALIN 432
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+CK + ++ M+ G + T L+ C+ EA F D+ R GLV
Sbjct: 433 GMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVA 492
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
+ + L F + GM A A++ MS + S ++ C
Sbjct: 493 NSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNC 534
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 181/430 (42%), Gaps = 61/430 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K K A+ LL + PD S +T LI + G + AI+ F
Sbjct: 305 MIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNT---LIHGFFGEGKINLAIYIF---- 357
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH-------------KRKE-----LD 102
N + ++ + + L+D C+ GR A + K K+ L
Sbjct: 358 NQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLA 417
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
P V Y+ L+NG + + + + M+K V PN V Y TLV +C+
Sbjct: 418 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 477
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVI-----DGLV-EAGRFEE-VSGMMERFLV-------- 207
A++ ++ + G+ N++++N ++ +G++ EA +F++ +S M F V
Sbjct: 478 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 537
Query: 208 --CEPG------------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
C+ G P + TY SL++G C+ G L A + + ++ +
Sbjct: 538 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 597
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
T N K G +++A++L KM+ PD TY ILL CK K+ A+ +
Sbjct: 598 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILL 657
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTFKRLNDEFKK 366
+ M +G D T L++ L + AS F+++I + GL + + + + + K
Sbjct: 658 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 717
Query: 367 RGMTALAQKL 376
G ++L
Sbjct: 718 GGQINEIERL 727
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 164/349 (46%), Gaps = 12/349 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ LI + AG ++ A+ F DM + L+ LC GR +
Sbjct: 201 SYAALIEGFCEAGRIDEALELFREMTQPDMYTH--------AALVKGLCDAGRGEEGLCM 252
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K KEL W PT R Y L++ W R + ++AE+ EM + P VVT +V Y
Sbjct: 253 LQKMKEL--GWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAY 310
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR R+ A+R+ + MR +G EPN YN ++ G AG+ + ++++ C P +
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L++G C G + A ++L++M G TYN K GKV++A +L+
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G P+ +T++ ++ LCK K D+A + M G D T + I LC+
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK-RLNDEFKKRGMTALAQKLCNVMSS 382
E ++M+++ + P + + +N F +R LA ++ M S
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNY-GLATRIWGQMVS 538
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 42/346 (12%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA+ +GA+ + L+ +LC++ ++ A Y + W P +N L+
Sbjct: 116 FAHMYRHAPPAPTGAT-YNALIRALCRRADLRHAQRYLSLM--VRSGWRPDAFTFNSLIL 172
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ R++ ++ A + +M + + V+Y L+EG+C R+D A+ L +EM +P
Sbjct: 173 GYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQP 228
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERF-----------------LVCEPG--------- 211
+ + ++ GL +AGR EE M+++ L C
Sbjct: 229 DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKIL 288
Query: 212 ---------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P +VT T +V YC+ G + GA ++ + M +G P+ TYN + F
Sbjct: 289 NEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNA 348
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GKV AM L +M E G PD +TY++L++ C + + A ++ + M+ G D T
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTY 408
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+LI LC+ K DEA + F+ + RG+ P+ +TF + + K G
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 6/320 (1%)
Query: 68 FDSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
FDSG I++++ C++GR+ A F + + P V YN ++ G+ +
Sbjct: 292 FDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRF--KGCEPNVWTYNAIVQGFCNAG 349
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V A +MR+ V P+VVTY L+ G C + A RL++ M G+ + YN
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYN 409
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+ID L + G+ +E + + P VT+ +++ G CKAG + A L+ MIS
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISA 469
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G+ P TY+ F K ++ + +M++ P + Y I++ L E LA
Sbjct: 470 GYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLA 529
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ +M +GC D+ T T + C + DEA +M + + + + L D
Sbjct: 530 TRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDG 589
Query: 364 FKKRGMTALAQKLCNVMSSV 383
G T A + M+ V
Sbjct: 590 HTSIGQTDRAVTILKHMTGV 609
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 52/287 (18%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
APT YN L+ R +++ A+R+ M + P+ T+ +L+ GYCR ++++ A
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L +M G +A+ Y +I+G EAGR +E + P M T+ +LVKG C
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLC 241
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
AG RG E+ + + +KM E G+ P
Sbjct: 242 DAG--------------RG---------------------EEGLCMLQKMKELGWRPTTR 266
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
Y L+ + C+E K + A ++ EM G + T T++++ CR + A FE M
Sbjct: 267 AYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+G P+ T+ A+ Q CN V ++M LLD
Sbjct: 327 RFKGCEPNVWTYN------------AIVQGFCNA-GKVYKAMALLDQ 360
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 143/358 (39%), Gaps = 22/358 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G V+ A F+ + + F +++ LCK G+ A +
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLE----YRGIRPNSVTFNTVINGLCKAGKFDVACTF 462
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ +AP Y+ + ++K ++ F EM +++V P+ V Y ++
Sbjct: 463 LENM--ISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRL 520
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R A R+ +M +G P+ + Y T + GR +E ++ C
Sbjct: 521 FNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDA 580
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY--------------NYFFRYFS 260
+ Y +L+ G+ G + A ILK M +P+ T+ + + S
Sbjct: 581 MAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATS 640
Query: 261 KFGKVE--DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ +E D L+ M ++ TY +L+ +E +LD + MK ++
Sbjct: 641 VWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLN 700
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D L++ C++ + +A A MI G +P+ + ++ L G A+++
Sbjct: 701 EDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEI 758
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT TY +L++ C+ DL A + L +M+ G+ P T+N + + ++E A
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAH 184
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ KM G++ D ++Y L++ C+ ++D A+++ +EM D+ T L+ L
Sbjct: 185 DLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGL 240
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C + +E + M G P + L D + + A+K+ N M
Sbjct: 241 CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM 291
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 148/407 (36%), Gaps = 102/407 (25%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K + D A C L D + + P+ V TF +I +AG + A F
Sbjct: 411 LIDALCKTGKVDEA-CSLFDGLEYRGIRPNSV---TFNTVINGLCKAGKFDVAC---TFL 463
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE-YFHKRKELDQSWAPTVRVYNILLNG 118
N+ + + + +++LCK K + E F + L + P+ Y I++N
Sbjct: 464 ENM-ISAGYAPDTYTYSPFIENLCK---TKGSQEGLFFIDEMLQKDVKPSTVNYTIVINR 519
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTY------------------------------- 147
F +N A R W +M + +P+VVTY
Sbjct: 520 LFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVD 579
Query: 148 ----GTLVEGYCRLRRVDRAIRLVKEM--------------------------------- 170
TL++G+ + + DRA+ ++K M
Sbjct: 580 AMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKAT 639
Query: 171 ------------------RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
+K + +A Y ++++G E R +EV+ ++
Sbjct: 640 SVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPL 699
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
Y +LV +CK A +L MI GFLP+ Y Y + G+ + A ++
Sbjct: 700 NEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIF 759
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLA---IQVSKEMKCRGCD 316
R Y D + + +++ ++ D+ I + ++MKC+ D
Sbjct: 760 RSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSD 806
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ R Y +L G+ + + + M++EN+ N Y LV +C+LR A L+
Sbjct: 665 SARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALL 724
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
M G PN I Y ++ GL G+ + + E + + ++ G+ +
Sbjct: 725 CSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRK 784
Query: 228 GDLEGASKILKMMISRGFLPSPTTY 252
G + ++ M+ PS TY
Sbjct: 785 GHADMCHDMISMLEQMKCKPSDETY 809
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 8/177 (4%)
Query: 52 AIW-TFEFANNLDMVK-----NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW 105
++W T E A+ ++ + + S A + +L+ ++ R+ + KE ++
Sbjct: 640 SVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKE--ENL 697
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+YN L+N + + + DA M PN++ Y L+ G + DRA
Sbjct: 698 PLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKE 757
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+ + R + + IV+ +IDG + G + M+ + P+ TY L +
Sbjct: 758 IFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 164/342 (47%), Gaps = 20/342 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVI--LIRRYARAGMVEAAIWTFEF 58
+IK K D A LL E S D I + R + +A V+ A
Sbjct: 112 IIKCYCKMDRLDQARQLL-------EESSCCSSDVIAITSVARGFCKAQRVDEAYQLL-- 162
Query: 59 ANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
LDMV+ + + + +++ CK GRV+ A E + P Y L+
Sbjct: 163 ---LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETL--VSMGCVPNAVTYTTLI 217
Query: 117 NGWFRSKNVKDAERFW--LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+G+ +S N+ +A + + L R + PNVVT+ L+ G C+ R++ A LVK+M+
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ + Y T++DGL + GR EVS + E L P++VTYT+LV +CKAG L+ A
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ 337
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++++ M+++G P TTY + GKV A + K++ P + Y L++
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
CK +D A++ EM R D T +L+ +LC+ + D
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 170/346 (49%), Gaps = 15/346 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI +AG + A+ + V N +LL SLC+ G + A
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRD----INLLLASLCQAGTMDQAMAI 60
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEG 153
F + +P+V NIL+NG+ + + A + EM K + P TY +++
Sbjct: 61 FRGIQ-----CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-P 212
YC++ R+D+A +L++E + I +V G +A R +E ++ + + P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+V + ++ G+CKAG + A ++L+ ++S G +P+ TY F K G + +A+ L+
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233
Query: 273 RKMIESGY--TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ + + P+ +T++ L+ LCK D+L+ A ++ K+MK R D T T L+ LC
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ + E S FE+M+R G P +T+ L K G AQ++
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQV 339
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 9/293 (3%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK RV A + E +S P + +N++++G+ ++ V++A + P
Sbjct: 150 CKAQRVDEAYQLLLDMVE-KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVP 208
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
N VTY TL++G+C+ + A++L K + R EPN + +N +I GL +A R E
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++++ + TYT+L+ G CK G S++ + M+ G PS TY
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM---KCRGCDI 317
K G ++DA + R M+ G PD TY +LL+ L + K+ A + +++ +C C +
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAV 388
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ L+ C+ DEA + +M+ R L P T K L + KRG T
Sbjct: 389 ---VYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 7/243 (2%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
PN T+ L+ G C+ R+ A+ +M + PN N ++ L +AG ++ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR-GFLPSPTTYNYFFRYFS 260
R + C P+++T L+ G+C+ L+ A ++ M +P TTY + +
Sbjct: 61 F-RGIQC--SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRGCDIDL 319
K +++ A L + S + D + + + CK ++D A Q+ +M + + D+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
++IH C+ + EA E ++ G VP+ +T+ L D F K G + A +L V
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 380 MSS 382
+SS
Sbjct: 236 LSS 238
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 177/347 (51%), Gaps = 18/347 (5%)
Query: 25 HEVPDF---VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
H++ DF S+ +V ++ + A F+F N+ + + ASL +L+ +
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLA---FKFYKNMREIGLPPTVASL-NVLIKA 165
Query: 82 LCKQ-GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
LC+ G V A + FH+ + + P Y L++G R + +A++ + EM +++
Sbjct: 166 LCRNDGTVDAGLKIFHEMPK--RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P VVTY +L+ G C + VD A+R V+EM+ +GIEPN Y++++DGL + GR +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ E + P MVTYT+L+ G CK ++ A ++L M +G P Y F
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-------LCKEDKLDLAIQVSKEMKCR 313
K +A N +MI G TP+RLT++I +K LC + A + M+ R
Sbjct: 344 AVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCT-NYPSRAFTLYLSMRSR 402
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G ++++T L+ LC+ +F +A ++++ G +P+ T+K L
Sbjct: 403 GISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLL 449
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A+ Y H DQS + +++ + K AE M+ EN + ++
Sbjct: 44 ANGYLH-----DQSS------FGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSI 92
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
GY R+ R ++R+ +M+ +P+ Y TV+ LVE + +
Sbjct: 93 CRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGL 152
Query: 211 GPTMVTYTSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT+ + L+K C+ G ++ KI M RG P TY +FG++++A
Sbjct: 153 PPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+E P +TY L+ LC +D A++ +EMK +G + ++ T + L+ L
Sbjct: 213 KLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGL 272
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
C+ + +A FE M+ RG P+ +T+ T L LC + ++EL
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTY------------TTLITGLCK-EQKIQEAVEL 319
Query: 390 LD 391
LD
Sbjct: 320 LD 321
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 188/361 (52%), Gaps = 22/361 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDLWVLMIDSYGKAGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A YF+K L + PT +N+++ G+F
Sbjct: 108 ELGVERTIKSYDALFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNVMMWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ + P+VVTY T+V GYCR+++++ A + EM+ IEP +
Sbjct: 162 LSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V R ++ ++E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S K G ++ A N+ + MI + Y +L++ CK
Sbjct: 282 VEKYI--APTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKA 339
Query: 298 DKLDLAIQ-----VSKEMKCR-GCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRG 349
+ D AI+ + K++ R + +++S LI LC + +A A +++ G
Sbjct: 340 GEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLG 399
Query: 350 L 350
+
Sbjct: 400 V 400
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR +P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAP 288
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKNSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ C+ K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S M L+ +CK
Sbjct: 250 GMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCK 303
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 139/304 (45%), Gaps = 21/304 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MVNGYCRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDRVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
M N A + LL LC ++ A ++ +++ APT ++ L++G
Sbjct: 248 GFGMKPN----AITYSTLLPGLCNAEKMSEARSIL--KEMVEKYIAPTDNSIFMRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI--EP 177
++ ++ A M + +V YG L+E YC+ D+AI+L+ ++ ++ I P
Sbjct: 302 CKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRP 361
Query: 178 NAIV------YNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDL 230
+ + YN +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALN--TLIRGHSQEGSP 419
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++LK+M+ R ++Y+ + + K + DA MIE+G+ PD + +
Sbjct: 420 DSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSV 479
Query: 291 LKIL 294
++ L
Sbjct: 480 MESL 483
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 164/342 (47%), Gaps = 20/342 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVI--LIRRYARAGMVEAAIWTFEF 58
+IK K D A LL E S D I + R + +A V+ A
Sbjct: 112 IIKCYCKMDRLDQARQLL-------EESSCCSSDVIAITSVARGFCKAQRVDEAYQLL-- 162
Query: 59 ANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
LDMV+ + + + +++ CK GRV+ A E + P Y L+
Sbjct: 163 ---LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETL--VSMGCVPNAVTYTTLI 217
Query: 117 NGWFRSKNVKDAERFW--LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+G+ +S N+ +A + + L R + PNVVT+ L+ G C+ R++ A LVK+M+
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ + Y T++DGL + GR EVS + E L P++VTYT+LV +CKAG L+ A
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ 337
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++++ M+++G P TTY + GKV A + K++ P + Y L++
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
CK +D A++ EM R D T +L+ +LC+ + D
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 171/346 (49%), Gaps = 15/346 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI +AG + A+ + V N +LL SLC+ G++ A
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRD----INLLLASLCQAGKMDQAMAI 60
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEG 153
F + +P+V NIL+NG+ + + A + EM K + P TY +++
Sbjct: 61 FRGIQ-----CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-P 212
YC++ R+D+A +L++E + I +V G +A R +E ++ + + P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+V + ++ G+CKAG + A ++L+ ++S G +P+ TY F K G + +A+ L+
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233
Query: 273 RKMIESGY--TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ + + P+ +T++ L+ LCK D+L+ A ++ K+MK R D T T L+ LC
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ + E S FE+M+R G P +T+ L K G AQ++
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQV 339
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 9/293 (3%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK RV A + E +S P + +N++++G+ ++ V++A + P
Sbjct: 150 CKAQRVDEAYQLLLDMVE-KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVP 208
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
N VTY TL++G+C+ + A++L K + R EPN + +N +I GL +A R E
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++++ + TYT+L+ G CK G S++ + M+ G PS TY
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM---KCRGCDI 317
K G ++DA + R M+ G PD TY +LL+ L + K+ A + +++ +C C +
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAV 388
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ L+ C+ DEA + +M+ R L P T K L + KRG T
Sbjct: 389 ---VYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 115/243 (47%), Gaps = 7/243 (2%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
PN T+ L+ G C+ R+ A+ +M + PN N ++ L +AG+ ++ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR-GFLPSPTTYNYFFRYFS 260
R + C P+++T L+ G+C+ L+ A ++ M +P TTY + +
Sbjct: 61 F-RGIQC--SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRGCDIDL 319
K +++ A L + S + D + + + CK ++D A Q+ +M + + D+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
++IH C+ + EA E ++ G VP+ +T+ L D F K G + A +L V
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 380 MSS 382
+SS
Sbjct: 236 LSS 238
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 167/334 (50%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T +++ + G AAI + LD S + I++DSLCK V A +
Sbjct: 211 THTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVS----YSIIIDSLCKNRLVNEAVDL 266
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F+ + + S PTV YN L+ G S K A + EM + N+ P+VVT+ LV+
Sbjct: 267 FYHMRSIGIS--PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ V A+ + +M + +EP+ + Y+++I G+ ++ ++E S ++ L P +
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT++ V +CK G + A I+ +MI RG P+ TYN + ++++A ++
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G PD L+Y+IL+K CK +++D A Q+ EM +G + T T LI LC+ +
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
A F+ M G P +T+ L F K G
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 173/348 (49%), Gaps = 6/348 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI G + A+ ++ M + + ++++ LCK G+ AA +
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYI----MSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K ELD P V Y+I+++ +++ V +A + MR ++P VVTY +L+ G
Sbjct: 232 MKKMVELD--CEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + +A L KEM + ++P+ + ++ ++D L + G E + + + P +
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY+SL+ G CK+ + +S +L M+SR P T++ + F K G V +A ++
Sbjct: 350 VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MIE G P+ +TY+ L+ C ++D A +V M +GC D+ + +LI C+ +
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F++M +GL P+ +T L + G A++L M S
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS 517
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 146/336 (43%), Gaps = 40/336 (11%)
Query: 83 CKQGRVKA---ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
CK G A YF++ ++ P + +N LL R K+ + +M
Sbjct: 77 CKGGSFSNFDDALAYFNQMVHMNP--FPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFG 134
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
V+ +V T L+ C L V ++ ++ K G +P+ I +NT+I+GL GR E
Sbjct: 135 VSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAM 194
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI------------------ 241
++ + PT+ T+T +V G CK G A +K M+
Sbjct: 195 EQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSL 254
Query: 242 -----------------SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
S G P+ TYN G+ + A L+++M+E PD
Sbjct: 255 CKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDV 314
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+T+ IL+ LCKE + A+ V +M + D+ T + LIH +C+ + E+S +
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNE 374
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
M+ R + P +TF D F K+GM + AQ + N+M
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLM 410
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 13/258 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD--MVKNFDSGASLFEILLDSLCKQ 85
PD V+ + + G+ ++++W E + L+ + +N F I +D CK+
Sbjct: 347 PDIVTYSSLI--------HGVCKSSLWK-ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKK 397
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G V A + +++ P V YN L++G+ + +A + + M + P+V+
Sbjct: 398 GMVSEAQSIINLM--IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+Y L++GYC+ R+D A +L EM +G+ PN+I + T+I GL +AGR + ++
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P ++TY++L+ G+CK G L+ A + + + P+ K GK+
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575
Query: 266 EDAMNLYRKMIESGYTPD 283
EDA L+ + PD
Sbjct: 576 EDAKELFSSLSIEELQPD 593
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 13/382 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ KA EFD ++ + PD V+ + +++ RAG EAA+ +
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHN---VMVDARFRAGDAEAAMALVD--- 154
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNG 118
MV K G + +L LC+ G A E F KE+D AP VR + IL+ G
Sbjct: 155 --SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF---KEMDDFGVAPDVRSFTILIGG 209
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ R +++A + + EMR + P++V++ L+ + R ++D A+ ++EMR G+ P+
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 269
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++Y VI G AG + + + + C P +VTY +L+ G CK L A +L
Sbjct: 270 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 329
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M RG P T+ + GK++ A+ L+ M+ PD +TY+ L+ +C++
Sbjct: 330 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 389
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
LD A + +M R + T ++LI C + ++A ++MI +G++P+ +T+
Sbjct: 390 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 449
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
+ + + G + QK M
Sbjct: 450 SIIKGYCRSGNVSKGQKFLQKM 471
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 173/354 (48%), Gaps = 11/354 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS F LI +AR G ++ A+ +V + ++ +++ C+ G
Sbjct: 233 PDLVS---FSCLIGLFARRGKMDHAMAYLREMRCFGLVPD----GVIYTMVIGGFCRAGL 285
Query: 88 VKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ S+ R E+ P V YN LLNG + + + DAE EMR+ V P++ T
Sbjct: 286 M---SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 342
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ TL+ GYC ++D+A++L M + + P+ + YNT+IDG+ G ++ + + +
Sbjct: 343 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 402
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E P VTY+ L+ +C+ G +E A L MI++G LP+ TYN + + + G V
Sbjct: 403 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 462
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+KM+ + +PD +TY+ L+ KEDK+ A ++ M+ D+ T MLI
Sbjct: 463 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 522
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ EA FE M +G+ P T+ + + G + A +L + M
Sbjct: 523 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 181/384 (47%), Gaps = 19/384 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKD--TFVILIRRYARAGMVEAAIWTFE 57
++K L ++ +D AW + E+ DF V+ D +F ILI + R G +E A+ ++
Sbjct: 171 VLKGLCRSGMWDKAWEVF------KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYK 224
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ + + S F L+ ++G++ A Y + + P +Y +++
Sbjct: 225 EMRHRGIKPDLVS----FSCLIGLFARRGKMDHAMAYLREMRCF--GLVPDGVIYTMVIG 278
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ R+ + DA R EM P+VVTY TL+ G C+ RR+ A L+ EMR+ G+ P
Sbjct: 279 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 338
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + T+I G G+ ++ + + L P +VTY +L+ G C+ GDL+ A+ +
Sbjct: 339 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 398
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M SR P+ TY+ + G+VEDA +MI G P+ +TY+ ++K C+
Sbjct: 399 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 458
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ + ++M DL T LIH + K +A M + + P +T+
Sbjct: 459 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 518
Query: 358 KRLNDEFKKRGMTALA----QKLC 377
L + F G A +K+C
Sbjct: 519 NMLINGFSVHGNVQEAGWIFEKMC 542
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 183/400 (45%), Gaps = 28/400 (7%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K +E A+ L+LD H VP + L+ +RAG W A+ +V
Sbjct: 40 KPREAFEAFRLILD----HRVP--IPAAASNALLAALSRAG------WPHLAADAYRLVF 87
Query: 67 NFDSGASLF--EILLDSLCKQ---GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ +S + + I++ + CK +V A KR P V +N++++ FR
Sbjct: 88 SSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVF-----PDVVTHNVMVDARFR 142
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ + + A M + + P +VTY ++++G CR D+A + KEM G+ P+
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+ +I G G EE + + P +V+++ L+ + + G ++ A L+ M
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G +P Y F + G + DA+ + +M+ G PD +TY+ LL LCKE +L
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + EM+ RG DL T T LIH C K D+A F+ M+ + L P +T+ L
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382
Query: 362 DEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
D ++G A L + M S P + L+DS C+
Sbjct: 383 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 422
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 18/251 (7%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y G ++ A+ F+ N + + + + L+D +C+QG + A++
Sbjct: 342 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT----YNTLIDGMCRQGDLDKANDL 397
Query: 95 F---HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ H R+ P Y+IL++ V+DA F EM + + PN++TY +++
Sbjct: 398 WDDMHSREIF-----PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVC 208
+GYCR V + + +++M + P+ I YNT+I G ++ + + + MME+ V
Sbjct: 453 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV- 511
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P +VTY L+ G+ G+++ A I + M ++G P TY G ++A
Sbjct: 512 --QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 569
Query: 269 MNLYRKMIESG 279
L+ +M++ G
Sbjct: 570 FQLHDEMLQRG 580
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ + A+ L + I +P+ + T+ +I+ Y R+G V +F + MV
Sbjct: 425 QVEDAFGFLDEMINKGILPNIM---TYNSIIKGYCRSGNVSKGQ---KFLQKM-MVNKVS 477
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
+ L+ K+ ++ A + + ++ + P V YN+L+NG+ NV++A
Sbjct: 478 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEK--EKVQPDVVTYNMLINGFSVHGNVQEAG 535
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ +M + + P+ TY +++ G+ A +L EM + G E
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 178/344 (51%), Gaps = 11/344 (3%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
++ +T ++RR+ A + A+ F+ L + KN +S +LLD+LCK+ V+
Sbjct: 151 LITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTES----MNVLLDTLCKEKFVE 206
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E + EL AP +NIL++GW + V++A EM+ P V++Y T
Sbjct: 207 QAREIY---LELKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYST 263
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+++ YC+ + DR L+ EM+ + PN + Y T++ L +A +FEE ++ER
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL-PSPTTYNYFFRYFSKFGKVEDA 268
P + + SL+ +AG ++ A+ + K+ + + + P+ +TYN F + + E A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 269 MNLYRKMIESGY-TPDRLTYHILLKILCKEDKLDLAIQ--VSKEMKCRGCDIDLDTSTML 325
+ ++M +SG PD TYH L+K K ++D + ++ + +DL T T+L
Sbjct: 384 FGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLL 443
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
IH L R + A FE+M + +VP Y T + L DE K++ M
Sbjct: 444 IHGLYRADRCKWAFDLFEEMADQDIVPRYKTCRLLLDEVKQKNM 487
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT---VIDGLVEAGRFEEVSGMM 202
+Y +V+ R++ +D+ +++EMR+E + I NT V+ V A ++++ +
Sbjct: 122 SYDMMVDILGRMKAMDKMREILEEMRQESL----ITLNTIAKVMRRFVGARQWKDAVRIF 177
Query: 203 E--RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ +FL E + L+ CK +E A +I + + P+ T+N +
Sbjct: 178 DDLQFLGLEKNTE--SMNVLLDTLCKEKFVEQAREIY-LELKHYIAPNAHTFNILIHGWC 234
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+VE+A ++M G P ++Y +++ C+E D + EM+ + C ++
Sbjct: 235 NIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVV 294
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T T ++ L + KF+EA E M G P L F L
Sbjct: 295 TYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSL 334
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQG+V A
Sbjct: 341 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA R++ +M E ++P + Y +L+
Sbjct: 395 LVFSKMRQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
C + D+A L+ EM GI + I +N++ID + GR E + + + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY++L+ GYC AG ++ A+K+L M+S G P TYN + K ++EDA+ L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M SG +PD +TY+I+L+ L + + A ++ + G ++L T +++H LC+
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+++ L TF + K G A+ L +S+
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL LC R + A E + P V Y ++NG+F+ ++ A + E
Sbjct: 165 YNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY +++ C+ + +D+A+ ++ M K G+ PN YN+++ G +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G +++ P +VTY SL+ CK G A K+ M RG P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ G + + L M+ +G P+ + IL+ K+ K+D A+ V +M+ +G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ D T +I +LC+ + ++A FE MI L P + + L
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 162/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ G V+ A+ F + + + ++ LCK GRV+ A YF
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQ----QGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++ A+ LEM + + + + ++++ +C
Sbjct: 433 EQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++P+ I Y+T+IDG AG+ +E + ++ + P V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYCK +E A + + M S G P TYN + + + A LY +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK + D A+++ + + ++ T ++I L ++ +
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F + GLVP T+ + + ++G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 9/361 (2%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
GG PD VS + +I + + G ++ A T+ + ++ N + +S+ + +L
Sbjct: 192 GGDCPPDVVS---YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI----IAAL 244
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK + A E + P R YN +++G+ S K+A F +M + V P
Sbjct: 245 CKAQAMDKAMEVLTSM--VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVTY +L++ C+ R A ++ M K G++P Y T++ G G E+ G++
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P ++ L+ Y K G ++ A + M +G P TY K
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+VEDAM + +MI+ +P + Y+ L+ LC DK D A ++ EM RG +D
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I C+ + E+ F+ M+R G+ P +T+ L D + G A KL M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 383 V 383
V
Sbjct: 543 V 543
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 138 ENVTPNVVTYGTL-----------------------------------VEGYCRLRRVDR 162
+ VTPN+ TYG L ++G C +R
Sbjct: 85 DEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSD 144
Query: 163 AIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTY 217
A+ +V + M + G PN YN ++ GL + R +E +++ ++ + G P +V+Y
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQ--MMPDDGGDCPPDVVSY 202
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T+++ G+ K GDL+ A M+ RG LP+ TY+ K ++ AM + M++
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G P+ TY+ ++ C + AI K+M G + D+ T L+ LC+ + E
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F+ M +RGL P T+ L + +G L ++M
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P YN L+NG+ + ++DA + E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSV--GMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G + A + + + G +P TY+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G T + R+ I+ K+L + D
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 161/347 (46%), Gaps = 10/347 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
P+ ++ F LI + G ++ A E +MV+N + L+D LCK+G
Sbjct: 308 PNLIN---FTSLIDGLCKKGSIKQAFEMLE-----EMVRNGWKPNVYTHTALIDGLCKRG 359
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F K D + P V Y ++ G+ + + AE + M+++ + PNV T
Sbjct: 360 WTEKAFRLFLKLVRSD-IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 418
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G+C+ DRA L+ M EG PN YN VID L + R E ++ +
Sbjct: 419 YTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAF 478
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
C VTYT L++ CK D++ A M GF N F + K++
Sbjct: 479 SCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 538
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
++ L++ ++ G P + TY ++ CKE DLA++ MK GC D T LI
Sbjct: 539 ESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLI 598
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
LC+ DEA +E MI RGL P +T L E+ KR +A A
Sbjct: 599 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASA 645
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 155/326 (47%), Gaps = 9/326 (2%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++L +LC+ G V A YF RK +D + P + + L++G + ++K A EM
Sbjct: 280 LILSALCENGLVNRAIWYF--RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 337
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ PNV T+ L++G C+ ++A RL +K +R + +PN Y ++I G + +
Sbjct: 338 RNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKL 397
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ R P + TYT+L+ G+CKAG+ + A +++ +M GF P+ TYN
Sbjct: 398 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAV 457
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K + +A L K G D +TY IL++ CK+ + A+ M G
Sbjct: 458 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGF 517
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ D+ + +LI CR K E+ F+ ++ GLVP T+ + + K G LA K
Sbjct: 518 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALK 577
Query: 376 LCNVM---SSVPRSM---ELLDSRCK 395
+ M VP S L+ CK
Sbjct: 578 YFHNMKRHGCVPDSFTYGSLISGLCK 603
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + +++ G FR +++A+R+ M + P+ T ++ C V+RAI
Sbjct: 238 PDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWY 297
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++M G +PN I + ++IDGL + G ++ M+E + P + T+T+L+ G CK
Sbjct: 298 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 357
Query: 227 AGDLEGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G E A ++ LK++ S + P+ TY + K K+ A L+ +M E G P+
Sbjct: 358 RGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 417
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ CK D A ++ M G ++ T +I LC+ + EA
Sbjct: 418 TYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKA 477
Query: 346 IRRGLVPHYLTFKRLNDE 363
GL +T+ L E
Sbjct: 478 FSCGLEADGVTYTILIQE 495
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ + + R++ A+ +V +M+ +G+ P++I N V++ +E+G + + + V
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P ++ +V G + G ++ A + L MI RGF+P T + G V A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+RKMI+ G+ P+ + + L+ LCK+ + A ++ +EM G ++ T T LI L
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355
Query: 330 CRMYKFDEASAEFEDMIRRGLV-PHYLTFKRL------NDEFKKRGMTALAQKLCNVMSS 382
C+ ++A F ++R + P+ T+ + D+ + M K + +
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415
Query: 383 VPRSMELLDSRCK 395
V L++ CK
Sbjct: 416 VNTYTTLINGHCK 428
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ CKQ +K A +F + + + +R+ NIL+ + R K +K++ER +
Sbjct: 489 YTILIQEQCKQSDIKQALAFFCRMNK--TGFEADMRLNNILIAAFCRQKKMKESERLFQL 546
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + P TY +++ GYC+ D A++ M++ G P++ Y ++I GL +
Sbjct: 547 VVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 606
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P VT +L YCK D A +L+ + + ++ + T
Sbjct: 607 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRT--- 663
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
R KV A ++K++E + DR+T
Sbjct: 664 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 695
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK ++AA E F + + P V N L++G + + A F+ E
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNK--DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNE 476
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + + N VTY L+ +C + +++A+ L EM + G P+AIVY T+I GL +AG+
Sbjct: 477 MQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGK 536
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ S ++ + P +V++ L+ G+C+ L+ A ++LK M + G P TYN
Sbjct: 537 LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT 596
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+FSK G A L +KM++ G P +TY L+ C LD A+++ ++M
Sbjct: 597 LISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS 656
Query: 315 CDIDLDTS--TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+ +T +LI+ LCR + D A + +DM +G+ P+ TF + +++ +
Sbjct: 657 -KVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSK 715
Query: 373 AQKLCNVMS 381
A +L + M+
Sbjct: 716 AFELMDRMT 724
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 190/397 (47%), Gaps = 27/397 (6%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILI---RRYARAGMVEAAIWT 55
+I L ++ D AW +L L K+GG V + S + + + R + R + A +
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGG--VMEAASCNALLTALGRAREFKRMNTLLAEMKE 333
Query: 56 FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW---APTVRVY 112
+ N+ F IL++ LCK RV A E F K + + P V Y
Sbjct: 334 MDIQPNV----------VTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY 383
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
N L++G + ++ MR + PN VTY L++GYC+ ++ A L +M
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP---TMVTYTSLVKGYCKAG 228
K+G+ PN + NT++DG+ + GR ++G +E F + VTYT+L++ +C
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGR---INGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVN 500
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
++E A ++ M+ G P Y S+ GK++ A + KM E+G++PD ++++
Sbjct: 501 NIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFN 560
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
+L+ C+++KLD A ++ KEM+ G D T LI + F A + M++
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE 620
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
GLVP +T+ L + G A K+ MSS +
Sbjct: 621 GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 173/365 (47%), Gaps = 14/365 (3%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
L+ K HEV F + LI R R+G + A W + + L + AS
Sbjct: 257 LVSKFAEHEV--FPNSIWLTQLISRLCRSGRTDRA-W--DVLHGLMKLGGVMEAASC-NA 310
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL +L + K + + KE+D P V + IL+N + + V +A + +M
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMD--IQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 138 EN-----VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYNTVIDGLVE 191
V P+V+TY TL++G C++ R + + LV+ MR + PN + YN +IDG +
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A E + ++ P +VT +LV G CK G + GA + M +G + T
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y R F +E AM L+ +M+E+G +PD + Y+ L+ L + KLD A V +MK
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
G D+ + +LI+ CR K DEA ++M G+ P +T+ L F K G +
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608
Query: 372 LAQKL 376
A +L
Sbjct: 609 TAHRL 613
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 164/338 (48%), Gaps = 7/338 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y +A M+EAA F+ N + N + L+D +CK GR+ A E+
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVT----LNTLVDGMCKHGRINGAVEF 473
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F++ + + Y L+ + N++ A + EM + +P+ + Y TL+ G
Sbjct: 474 FNEMQ--GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGL 531
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ ++DRA ++ +M++ G P+ + +N +I+G + +E M++ P
Sbjct: 532 SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ + K GD A +++K M+ G +P+ TY + G +++AM ++R
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651
Query: 275 MIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M S P+ + Y+IL+ LC+++++DLA+ + +MK +G + +T + L
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+A + M P Y+T + L + G TA
Sbjct: 712 WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETA 749
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 61/394 (15%)
Query: 25 HEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE---FANNLDMVKNFDSGASLFEILLDS 81
H++P +S + +LIR + RA MV+ + + + L ++N IL+D
Sbjct: 153 HKIP--LSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRN---------ILIDV 201
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR----SKNVKDAERFWL--EM 135
L ++GRV A + + + P +I+ + + + V + E L +
Sbjct: 202 LFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKF 261
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRA-------------------------------- 163
+ V PN + L+ CR R DRA
Sbjct: 262 AEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREF 321
Query: 164 ---IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-----PTMV 215
L+ EM++ I+PN + + +I+ L + R +E + E+ E P ++
Sbjct: 322 KRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVI 381
Query: 216 TYTSLVKGYCKAG-DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY +L+ G CK G EG + +M +P+ TYN + K +E A L+ +
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G P+ +T + L+ +CK +++ A++ EM+ +G + T T LI C +
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F++M+ G P + + L + G
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAG 535
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIE--PNAIVYNTVIDGLVE---AGRF---EEVSGM 201
L++ R RVD A+ L+ EM + E PN+ + V L + GR EE+ G+
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ +F E P + T L+ C++G + A +L ++ G + + N +
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM---KCRG--CD 316
+ + L +M E P+ +T+ IL+ LCK ++D A++V ++M + G +
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRLNDEFKKRGMTALAQK 375
D+ T LI LC++ + +E E M + +P+ +T+ L D + K M A++
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437
Query: 376 LCNVMS--SVPRSM----ELLDSRCK 395
L + M+ VP ++ L+D CK
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCK 463
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 14/210 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D A+ +L + PD V+ +T LI +++ G F A+
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT---LISHFSKTG-------DFSTAH 611
Query: 61 NL--DMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L MVK + L+ + C G + A + F + P +YNIL+N
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV-PPNTVIYNILIN 670
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
R V A +M+ + V PN T+ + +G + +A L+ M + P
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNP 730
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+ I + + L G ++ ++ + V
Sbjct: 731 DYITMEILTEWLSAVGETAKLKSFVQGYEV 760
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 193/392 (49%), Gaps = 20/392 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++++L + + + A C+L + G V++D FV LI Y RAG+V+ ++ F+
Sbjct: 125 IVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAFVSLIDSYGRAGIVQESVKLFKKMK 184
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A Y++ L + PT +NILL G F
Sbjct: 185 ELGLDRTVKSYDALFKVIL----RRGRYMMAKRYYNAM--LLEGVDPTRHTFNILLWGMF 238
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S + A RF+ +M+ + P+VVTY TL+ GY R ++VD A +L EM+ I PN I
Sbjct: 239 LSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVI 298
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ T++ G V AGR ++ + E C P +VT+++L+ G C A + A +L M
Sbjct: 299 SFTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEM 358
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ R P F + S K G ++ A ++ + M+ + Y +L++ CK
Sbjct: 359 VERYIAPKDNA--LFMKMMSCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKA 416
Query: 298 DKLDLAIQ-----VSKEMKCR-GCDIDLDTS--TMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ D A + + KE+ R D +++ S ++I LC + +A F ++++G
Sbjct: 417 NVYDKAEKLLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKG 476
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
V + F L K G A ++ +M
Sbjct: 477 -VQDSVAFNNLIRGHSKEGNPDSAFEIMKIMG 507
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 162/360 (45%), Gaps = 29/360 (8%)
Query: 9 KEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNF 68
K+ D A L ++ G VP+ +S F +++ Y AG ++ A+ FE + N
Sbjct: 276 KKVDEAEKLFVEMKGRDIVPNVIS---FTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNV 332
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR-VYNILLNGWFRSKNVKD 127
+ F LL LC ++ A + + E + AP ++ +++ ++ ++
Sbjct: 333 VT----FSTLLPGLCDAEKMAEARDVLGEMVE--RYIAPKDNALFMKMMSCQCKAGDLDA 386
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI----------EP 177
A M + ++ YG L+E +C+ D+A +L+ ++ ++ I EP
Sbjct: 387 AADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSEMEP 446
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERF---LVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+A YN +I L E GR +G E F L+ + V + +L++G+ K G+ + A
Sbjct: 447 SA--YNLMIGYLCEHGR----TGKAETFFRQLLKKGVQDSVAFNNLIRGHSKEGNPDSAF 500
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+I+K+M RG +Y + + G+ DA M+ESG+ P+ Y +++ L
Sbjct: 501 EIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESL 560
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+ ++ A +V K M +G ++D ++ L +EA + ++ G P +
Sbjct: 561 FDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEALGRIDLLMHNGCEPDF 620
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 14/255 (5%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHK--------RKELDQSWAPTVRVYNILLNGWFRSK 123
A + +L++S CK A + K R + D P+ YN+++
Sbjct: 403 AGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSEMEPSA--YNLMIGYLCEHG 460
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
AE F+ ++ K+ V + V + L+ G+ + D A ++K M + G+ + Y
Sbjct: 461 RTGKAETFFRQLLKKGVQ-DSVAFNNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYR 519
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I+ + G + ++ L P Y S+++ G ++ AS+++K M+ +
Sbjct: 520 LLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEK 579
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G + G VE+A+ ++ +G PD + LL +LC+++K A
Sbjct: 580 GAKENMDLVLKILEALLLRGHVEEALGRIDLLMHNGCEPD---FDHLLSVLCEKEKTIAA 636
Query: 304 IQVSKEMKCRGCDID 318
+++ + R C ID
Sbjct: 637 LKLLDFVLERDCIID 651
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 45/276 (16%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S + +++ LC+ GR A +F R+ L + +V +N L+ G + N A
Sbjct: 447 SAYNLMIGYLCEHGRTGKAETFF--RQLLKKGVQDSV-AFNNLIRGHSKEGNPDSAFEIM 503
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLR---------------------------------- 158
M + V +V +Y L+E Y R
Sbjct: 504 KIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDD 563
Query: 159 -RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPGPTMV 215
RV A R++K M ++G + N + +++ L+ G EE G ++ + CEP
Sbjct: 564 GRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEALGRIDLLMHNGCEP----- 618
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ L+ C+ A K+L ++ R + + Y+ GK +A ++ K+
Sbjct: 619 DFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAYSILCKI 678
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+E G + D + L+K L +E A +S+ +K
Sbjct: 679 LEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMIK 714
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQG+V A
Sbjct: 341 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA R++ +M E ++P + Y +L+
Sbjct: 395 LVFSKMRQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
C + D+A L+ EM GI + I +N++ID + GR E + + + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY++L+ GYC AG ++ A+K+L M+S G P TYN + K ++EDA+ L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M SG +PD +TY+I+L+ L + + A ++ + G ++L T +++H LC+
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+++ L TF + K G A+ L +S+
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL LC + R + A E + P V Y ++NG+F+ ++ A + E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY +++ C+ + +D+A+ ++ M K G+ PN YN+++ G +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G +++ P +VTY SL+ CK G A K+ M RG P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ G + + L M+ +G P+ + IL+ K+ K+D A+ V +M+ +G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ D T +I +LC+ + ++A FE MI L P + + L
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 162/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ G V+ A+ F + + + ++ LCK GRV+ A YF
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQ----QGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++ A+ LEM + + + + ++++ +C
Sbjct: 433 EQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++P+ I Y+T+IDG AG+ +E + ++ + P V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYCK +E A + + M S G P TYN + + + A LY +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK + D A+++ + + ++ T ++I L ++ +
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F + GLVP T+ + + ++G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 9/361 (2%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
GG PD VS + +I + + G ++ A T+ + ++ N + +S+ + +L
Sbjct: 192 GGDCPPDVVS---YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI----IAAL 244
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK + A E + P R YN +++G+ S K+A F +M + V P
Sbjct: 245 CKAQAMDKAMEVLTSM--VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVTY +L++ C+ R A ++ M K G++P Y T++ G G E+ G++
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P ++ L+ Y K G ++ A + M +G P TY K
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+VEDAM + +MI+ +P + Y+ L+ LC DK D A ++ EM RG +D
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I C+ + E+ F+ M+R G+ P +T+ L D + G A KL M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 383 V 383
V
Sbjct: 543 V 543
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 138 ENVTPNVVTYGTLV-----------------------------------EGYCRLRRVDR 162
+ VTPN+ TYG L+ +G C +R
Sbjct: 85 DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144
Query: 163 AIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTY 217
A+ +V + M + G PN YN ++ GL + R +E +++ ++ + G P +V+Y
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ--MMPDDGGDCPPDVVSY 202
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T+++ G+ K GDL+ A M+ RG LP+ TY+ K ++ AM + M++
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G P+ TY+ ++ C + AI K+M G + D+ T L+ LC+ + E
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F+ M +RGL P T+ L + +G L ++M
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P YN L+NG+ + ++DA + E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSV--GMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G + A + + + G +P TY+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G T + R+ I+ K+L + D
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 171/353 (48%), Gaps = 11/353 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ + GG V+ T +I+IR+Y V AI TF
Sbjct: 198 MISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIMIRKYCAVHDVARAINTFYAYK 257
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NF G F LL +LC+ V+ A K++ + + +NI+LNGW
Sbjct: 258 RF----NFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDV---FPLDTKSFNIILNGWC 310
Query: 121 R-SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ AER W EM K + +VV+YG+++ Y + ++ + +R+ EM+K I P+
Sbjct: 311 NLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDR 370
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VYN VI L + +E ++ + P +VTY SL+K CKA ++ A ++
Sbjct: 371 KVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDE 430
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ R P+ T++ FFR E+ L KM E P TY +L++ C+ +
Sbjct: 431 MLKRHLSPTIQTFHAFFRILR---TKEEVFELLDKMKELRCYPTIETYIMLIRKFCRWCQ 487
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LD ++ M+ D + +LIH L K +EA + +M +G +P
Sbjct: 488 LDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQEKGFLP 540
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 204/441 (46%), Gaps = 60/441 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KAK+ D A LL+ + PD + F+ +G +EA EFA+
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFI--------SGYIEAG----EFAS 543
Query: 61 NLDMVKN-FDSGA----SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
VK + G L L++ CK+G+V A F R ++Q + Y +L
Sbjct: 544 ADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAF--RSMVEQGILGDAKTYTVL 601
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+NG ++ V DAE + EMR + + P+V +YGTL++G+ +L + +A + EM + G+
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
N I+YN ++ G +G E+ +++ P VTY +++ GYCK+GDL A +
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721
Query: 236 ILKMMISRGFLP----------------------------------SPTTYNYFFRYFSK 261
+ M +G +P S +N + K
Sbjct: 722 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFK 781
Query: 262 FGKVEDAMNLYRKMIESGY----TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
FGK E ++ ++++ + P+ +TY+I++ LCKE L+ A ++ M+
Sbjct: 782 FGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T T L++ +M + E + F+++I G+ P + + + + F K GMT A L
Sbjct: 842 TVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLL 901
Query: 378 NVM---SSVPRSMELLDSRCK 395
+ M ++V +L S C+
Sbjct: 902 DQMFAKNAVDDGCKLSISTCR 922
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 197/439 (44%), Gaps = 56/439 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K + A LL++ + V F + ILI + +AA N
Sbjct: 286 LIDGLCKQKRLEDAKSLLVEM---NSVGLFADNVAYSILIDGLLKGRNADAA-------N 335
Query: 61 NL--DMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L +MV + F +++ + + K+G ++ A F + P R Y L+
Sbjct: 336 GLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGM--ITFGVTPGARAYASLIE 393
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC---------------------- 155
G+FR KNV+ +E++K N+ + TYGT V+G C
Sbjct: 394 GFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRP 453
Query: 156 -------------RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ R A+R++KEMR++GI P+ YN++I GL +A + +E +
Sbjct: 454 NVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P TY + + GY +AG+ A K +K M+ G +P+ + K
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GKV +A + +R M+E G D TY +L+ L K K++ A ++ EM+ +G D+ +
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI ++ +AS+ F++M++ GL + + + L F + G A++L + MS
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG 693
Query: 383 ---VPRSM---ELLDSRCK 395
P ++ ++D CK
Sbjct: 694 KGFPPNAVTYCTIIDGYCK 712
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 145/322 (45%), Gaps = 10/322 (3%)
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
+C G + A ++ KE+ S P V +Y L+ + + DA R EMR++
Sbjct: 429 GMCSSGDLDGA---YNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG 485
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
+ P+ Y +L+ G + +++D A + EM + G +P+A Y I G +EAG F
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASAD 545
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
++ L C P V T L+ YCK G + A + M+ +G L TY
Sbjct: 546 KYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGL 605
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K GKV DA ++ +M G PD +Y L+ K + A + EM G ++
Sbjct: 606 VKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNV 665
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
ML+ CR + ++A ++M +G P+ +T+ + D + K G A A +L +
Sbjct: 666 IIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDE 725
Query: 380 M---SSVPRSM---ELLDSRCK 395
M VP S L+D C+
Sbjct: 726 MKLKGLVPDSFVYTTLVDGCCR 747
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 165/346 (47%), Gaps = 21/346 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQG 86
PD S T LI +++ G ++ A F+ +MV+ S ++ +LL C+ G
Sbjct: 628 PDVFSYGT---LIDGFSKLGNMQKASSIFD-----EMVQAGLTSNVIIYNMLLGGFCRSG 679
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A E + + + P Y +++G+ +S ++ +A + + EM+ + + P+
Sbjct: 680 EIEKAKELLDEMS--GKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFV 737
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TLV+G CRL V+RAI + E ++G ++ +N +I+ + + G+ E + M+ R +
Sbjct: 738 YTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLM 796
Query: 207 VCE----PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P VTY ++ CK G+LE A ++ M +P+ TY + K
Sbjct: 797 DGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKM 856
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-----GCDI 317
G+ + +++ ++I +G PD + Y +++ KE A+ + +M + GC +
Sbjct: 857 GRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKL 916
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ T L+ ++ + + A E+M+R +P T L +E
Sbjct: 917 SISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINE 962
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 156/346 (45%), Gaps = 25/346 (7%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKE--------LDQSW-----------APTVRVYNIL 115
+E+L+ + C+ G V+ A + K +E +D++ P+ + YN+L
Sbjct: 227 YEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLL 286
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++G + K ++DA+ +EM + + V Y L++G + R D A LV EM G
Sbjct: 287 IDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGF 346
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+ ++Y+ I + + G E+ + + + P Y SL++G+ + ++ +
Sbjct: 347 SIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYE 406
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L + R + SP TY + G ++ A N+ ++M SG P+ + Y L+K
Sbjct: 407 LLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFL 466
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
++ + A++V KEM+ +G D LI L + K DEA + +M+ G P
Sbjct: 467 QKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAF 526
Query: 356 TFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCK 395
T+ + + G A A K C V+ + L++ CK
Sbjct: 527 TYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCK 572
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 150/379 (39%), Gaps = 57/379 (15%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
++IR R V A +W+ + V D LF IL+D ++G + A F
Sbjct: 119 VVIRMIERKWPV-AEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSS 177
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR- 156
K+LD P++ N LL+ + + + M + NV +V +Y L+ +CR
Sbjct: 178 TKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRD 237
Query: 157 --------------------LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
VD A+ L K M +G+ P+ YN +IDGL + R E
Sbjct: 238 GNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLE 297
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ ++ V Y+ L+ G K + + A+ ++ M+S GF P Y+YF
Sbjct: 298 DAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFI 357
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPD-----------------RLTYHILLKI------ 293
SK G +E A L+ MI G TP R Y +L++I
Sbjct: 358 CVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIV 417
Query: 294 ------------LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
+C LD A + KEM GC ++ T LI + +F +A
Sbjct: 418 ISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRV 477
Query: 342 FEDMIRRGLVPHYLTFKRL 360
++M +G+ P + L
Sbjct: 478 LKEMREQGIAPDTFCYNSL 496
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 170/349 (48%), Gaps = 6/349 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +L+R R G + +A F+ + + + S F ++ +C+ G + A E
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS----FNTMISGMCRAGDLDGA-ETL 173
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
H+R + P V Y L+ G R ++DA + +M + PN V + L++ +C
Sbjct: 174 HRRMS-EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + + L +EMR+ G+ P+A+ YN +++GL A + SG++ P V
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TYT+L+ GYCK +L+ A +I + M++ G TY SK G+ DA + +M
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+E+G PD TY +++ C++ + +++ KEM+ +G + T ++++ C++ +
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 412
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
A MI G+ P +T+ L D K G ++L + +VP
Sbjct: 413 KNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVP 461
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 4/287 (1%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
LD P +++N+L+ R + A+ + EM+ V VV++ T++ G CR +
Sbjct: 108 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDL 167
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYT 218
D A L + M + G+ P+ Y +I GL GR E+ G+ E+ C G P V +T
Sbjct: 168 DGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM--CGRGMKPNAVVFT 225
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L+ +CK GD E ++ + M RG P TYN + ++ A + +M +
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY L+ CKE++LD+A+++ + M G +D T T LI L + + +A
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
+M+ GL P T+ + D F ++G +L M + R
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 392
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R +A F+L++ + P + L+ RL + A + EM+ G+ +
Sbjct: 93 RFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVV 152
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I G+ AG + + R P + TY +L++G C+ G +E A + + M
Sbjct: 153 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG P+ + K G E + L+R+M E G PD +TY+ ++ LC+ L
Sbjct: 213 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + EM+ G D T T LI C+ + D A ++M+ G+ +T+ L
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 332
Query: 361 NDEFKKRGMTALAQKLCNVM 380
K G +A A+++ M
Sbjct: 333 ISGLSKAGRSADAERVLGEM 352
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 38/180 (21%)
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
Y + G L A ++ + + RG PT+ S+F +A Y +++++G P+
Sbjct: 59 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLM---SRFPTAPEACAFYLQLLDAGLPPE 115
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMK------------------CRGCDI-------- 317
+++L++ L + +L A V EM+ CR D+
Sbjct: 116 AKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHR 175
Query: 318 ---------DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T LI LCR+ + ++A FE M RG+ P+ + F L D K+G
Sbjct: 176 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 235
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 9/350 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K K + A+ L + + PD V T+ LI + G ++ AI F
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVV---TYSALISGFCILGKLKDAIDLF---- 283
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +++N F IL+++ CK G++K F + Q P YN L++G+
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM--MKQGIKPNFVTYNSLMDGYC 341
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V A+ + M + V P++ +Y ++ G+C++++ D A+ L KEM ++ I P+ +
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++IDGL ++GR ++++ P + TY S++ CK ++ A +L
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+GF P +TY+ + + GK+EDA ++ ++ GY D Y I+++ C E
Sbjct: 462 KDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLF 521
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ A+ + +M+ GC D T ++I L + + D A +MI RGL
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 187/377 (49%), Gaps = 11/377 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E +A LL G P+ V +T +I + +V A F
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT---IIDSMCKVKLVNEAFDLFS--- 249
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+MV K + L+ C G++K A + F+K + ++ P V +NIL+N +
Sbjct: 250 --EMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM--ILENIKPDVYTFNILVNAF 305
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +K+ + + M K+ + PN VTY +L++GYC ++ V++A + M + G+ P+
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y+ +I+G + +F+E + + P +VTY+SL+ G K+G + A +++
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M RG P+ TYN K +V+ A+ L K + G+ PD TY IL+K LC+ K
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A +V +++ +G ++D+ T++I C F+EA A M G +P T++
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 360 LNDEFKKRGMTALAQKL 376
+ K+ +A+KL
Sbjct: 546 IILSLFKKDENDMAEKL 562
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 161/335 (48%), Gaps = 11/335 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + TF L + G ++ A F F + + + F + L+ LCK G
Sbjct: 152 VPDTI---TFTTLSKGLCLKGQIQQA---FLFHDKV-VALGFHFDQISYGTLIHGLCKVG 204
Query: 87 RVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+AA + + +D + P V +YN +++ + K V +A + EM + ++P+VV
Sbjct: 205 ETRAALDLLQR---VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVV 261
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ G+C L ++ AI L +M E I+P+ +N +++ + G+ +E + +
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTY SL+ GYC ++ A I M G P +Y+ F K K
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++AMNL+++M PD +TY L+ L K ++ A+Q+ +M RG ++ T +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ LC+ ++ D+A A +G P T+ L
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 159/326 (48%), Gaps = 8/326 (2%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
IL++ C+ G + A F K L + P + L G ++ A F ++
Sbjct: 124 NILINCFCQLGLIPFAFSVF--AKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKV 181
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ ++YGTL+ G C++ A+ L++ + ++PN ++YNT+ID + +
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
E + + P +VTY++L+ G+C G L+ A + MI P T+N
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K GK+++ ++ M++ G P+ +TY+ L+ C +++ A + M G
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ D+ + +++I+ C++ KFDEA F++M R+ ++P +T+ L D K G + A +
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421
Query: 376 LCNVMS--SVPRSM----ELLDSRCK 395
L + M VP ++ +LD+ CK
Sbjct: 422 LVDQMHDRGVPPNICTYNSILDALCK 447
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 36/298 (12%)
Query: 120 FRSKN-VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
F S N V DA + + + N TP + ++ + + + L ++M GI+PN
Sbjct: 60 FHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 119
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ N +I+ + G + + L P +T+T+L KG C G ++ A
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHD 179
Query: 239 MMISRGF-----------------------------------LPSPTTYNYFFRYFSKFG 263
+++ GF P+ YN K
Sbjct: 180 KVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVK 239
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
V +A +L+ +M+ G +PD +TY L+ C KL AI + +M D+ T
Sbjct: 240 LVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFN 299
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+L++ C+ K E F+ M+++G+ P+++T+ L D + A+ + N M+
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 115/260 (44%), Gaps = 6/260 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N ++Y + + VD A+ L + + P A +N ++ LV++ + V +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++ P +V L+ +C+ G + A + ++ G++P T+ +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+++ A + K++ G+ D+++Y L+ LCK + A+ + + + ++
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF----KKRGMTALAQKLC- 377
+I +C++ +EA F +M+ +G+ P +T+ L F K + L K+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 378 -NVMSSVPRSMELLDSRCKD 396
N+ V L+++ CKD
Sbjct: 289 ENIKPDVYTFNILVNAFCKD 308
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQG+V A
Sbjct: 341 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA R++ +M E ++P + Y +L+
Sbjct: 395 LVFSKMRQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
C + D+A L+ EM GI + I +N++ID + GR E + + + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY++L+ GYC AG ++ A+K+L M+S G P TYN + K ++EDA+ L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M SG +PD +TY+I+L+ L + + A ++ + G ++L T +++H LC+
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+++ L TF + K G A+ L +S+
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL LC + R + A E + P V Y ++NG+F+ ++ A + E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY +++ C+ + +D+A+ ++ M K G+ PN YN+++ G +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G +++ P +VTY SL+ CK G A K+ M RG P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ G + + L M+ +G P+ + IL+ K+ K+D A+ V +M+ +G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ D T +I +LC+ + ++A FE MI L P + + L
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 162/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ G V+ A+ F + + + ++ LCK GRV+ A YF
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQ----QGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++ A+ LEM + + + + ++++ +C
Sbjct: 433 EQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++P+ I Y+T+IDG AG+ +E + ++ + P V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYCK +E A + + M S G P TYN + + + A LY +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK + D A+++ + + ++ T ++I L ++ +
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F + GLVP T+ + + ++G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 9/361 (2%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
GG PD VS + +I + + G ++ A T+ + ++ N + +S+ + +L
Sbjct: 192 GGDCPPDVVS---YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI----IAAL 244
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK + A E + P R YN +++G+ S K+A F +M + V P
Sbjct: 245 CKAQAMDKAMEVLTSM--VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVTY +L++ C+ R A ++ M K G++P Y T++ G G E+ G++
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P ++ L+ Y K G ++ A + M +G P TY K
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+VEDAM + +MI+ +P + Y+ L+ LC DK D A ++ EM RG +D
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I C+ + E+ F+ M+R G+ P +T+ L D + G A KL M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 383 V 383
V
Sbjct: 543 V 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 138 ENVTPNVVTYGTLV-----------------------------------EGYCRLRRVDR 162
+ VTPN+ TYG L+ +G C +R
Sbjct: 85 DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144
Query: 163 AIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTY 217
A+ +V + M + G PN YN ++ GL + R +E +++ ++ + G P +V+Y
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ--MMPDDGGDCPPDVVSY 202
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T+++ G+ K GDL+ A M+ RG LP+ TY+ K ++ AM + M++
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G P+ TY+ ++ C + AI K+M G + D+ T L+ LC+ + E
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F+ M +RGL P T+ L + +G L ++M
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P YN L+NG+ + ++DA + E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSV--GMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G + A + + + G +P TY+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G T + R+ I+ K+L + D
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 172/350 (49%), Gaps = 15/350 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +LAK F A LLD++ VP +S LIRRY RA M E A+
Sbjct: 141 MIDLLAKHHHFSLAR-HLLDEMRERAVP--ISSRLIFALIRRYVRAEMPS------EAAD 191
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + SGA L L + + ASE + P V +Y +++ W
Sbjct: 192 LFRRMEEYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWC 251
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + +AER + EM++ + PNV TY +++ R +V RA L+ +M G PN
Sbjct: 252 RAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTA 311
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYCK--AGDLEGASKI 236
+N ++ V+AGR E+V + + L CEP ++TY L++ +C G+L+ A K+
Sbjct: 312 TFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPD--IITYNFLIETHCGKGQGNLDAALKV 369
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI++ +P T+N FR G + A LY KM E P+ +TY+ LLK+ K
Sbjct: 370 LDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNK 429
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
E +D+ +++ K M G + ++ T LI C + A A ++MI
Sbjct: 430 EKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMI 479
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + +A + A LL I P+ TF ++R + +AG E + +
Sbjct: 281 VIDAMYRAGQVPRAQELLCQMIDSGCPPNTA---TFNAIMRAHVKAGRSEQVLQVHNQMH 337
Query: 61 NLDMVKNFDSGASLFEILLDSLCK--QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L + + + L+++ C QG + AA + K + + P +N +
Sbjct: 338 QLRCEPDIIT----YNFLIETHCGKGQGNLDAALKVLDKM--IAKKCVPDCHTFNPMFRL 391
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
N+ A + + +MR+ PNVVTY L++ + + + +D +R+ K M EGIEPN
Sbjct: 392 LVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKEKSMDMVLRMKKNMDVEGIEPN 451
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASKIL 237
Y +I+ G ++ ++ + + P+ ++ KAG L+ +++
Sbjct: 452 MHTYAALIEAFCGRGNWKRAHATLKEMIEEKSFKPSKQVRDMVLVLLRKAGQLKKHEELV 511
Query: 238 KMMISRGFLPSPTT 251
++M+ RGF+ P
Sbjct: 512 ELMVDRGFISHPAN 525
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE---DAMNLYR 273
Y S++ K A +L M R P + F ++ + E +A +L+R
Sbjct: 138 YASMIDLLAKHHHFSLARHLLDEMRERAV---PISSRLIFALIRRYVRAEMPSEAADLFR 194
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC-DIDLDTSTMLIHLLCRM 332
+M E G L + +L Q + CR D+ T ++H CR
Sbjct: 195 RMEEYGSGAPEPATLASLLAALSKKRLASEAQALFD-SCRTVFTPDVVLYTAVVHAWCRA 253
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK-LCNVMSS 382
+ DEA F +M + G++P+ T+ + D + G AQ+ LC ++ S
Sbjct: 254 GQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDS 304
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 12/209 (5%)
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS-----LVKGYCKAGDLEGASK 235
+Y ++ID L + F + R L+ E V +S L++ Y +A A+
Sbjct: 137 LYASMIDLLAKHHHFS-----LARHLLDEMRERAVPISSRLIFALIRRYVRAEMPSEAAD 191
Query: 236 ILKMMISRGF-LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ + M G P P T SK +A L+ + +TPD + Y ++
Sbjct: 192 LFRRMEEYGSGAPEPATLASLLAALSKKRLASEAQALFDS-CRTVFTPDVVLYTAVVHAW 250
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C+ +LD A +V EM+ G ++ T T +I + R + A MI G P+
Sbjct: 251 CRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNT 310
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
TF + K G + ++ N M +
Sbjct: 311 ATFNAIMRAHVKAGRSEQVLQVHNQMHQL 339
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L A +L D G P+ V+ +T L+ + RAG V+ A
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT---LVAAFFRAGEVDGAERLVGMML 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + N + F +++ +CK G+++ A + F + + + AP YN L+ G+
Sbjct: 213 DGGLKPNLVT----FNSMVNGMCKAGKMEDARKVFDEM--MREGLAPDGVSYNTLVGGYC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +A + EM ++ + P+VVT+ +L+ C+ ++ A+ LV++MR+ G++ N +
Sbjct: 267 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEV 326
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +IDG + G ++ + C P++V Y +L+ GYC G ++ A ++L M
Sbjct: 327 TFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 386
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++G P TY+ + K A L ++M+E G PD +TY L+++LC+E +L
Sbjct: 387 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRL 446
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + K M G D T T LI C+ + A + + M++ G++P +T+ L
Sbjct: 447 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVL 506
Query: 361 NDEFKKRGMTALAQKL 376
+ K AQ+L
Sbjct: 507 INGLSKSARAMEAQQL 522
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 130/268 (48%), Gaps = 4/268 (1%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L AP V YNIL+ + K+A +MR PNVVTY TLV + R V
Sbjct: 142 LSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEV 201
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A RLV M G++PN + +N++++G+ +AG+ E+ + + + P V+Y +L
Sbjct: 202 DGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTL 261
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
V GYCKAG A + M +G +P T+ K G +E A+ L R+M E G
Sbjct: 262 VGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGL 321
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS--TMLIHLLCRMYKFDEA 338
+ +T+ L+ CK+ LD A+ + M R C I LI+ C + + DEA
Sbjct: 322 QMNEVTFTALIDGFCKKGFLDDALLAVRGM--RQCRIKPSVVCYNALINGYCMVGRMDEA 379
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+M +GL P +T+ + + K
Sbjct: 380 RELLHEMEAKGLKPDVVTYSTIISAYCK 407
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 1/278 (0%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ P+V YN +L ++ A RF+ M + V PNV TY L+ C A+
Sbjct: 112 YVPSVLAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
++++MR G PN + YNT++ AG + ++ L P +VT+ S+V G
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CKAG +E A K+ M+ G P +YN + K G +A++++ +M + G PD
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+T+ L+ ++CK L+ A+ + ++M+ RG ++ T T LI C+ D+A
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
M + + P + + L + + G A++L + M +
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA 388
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 161/374 (43%), Gaps = 28/374 (7%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V TF LI +AG +E W + + F L+D CK+G
Sbjct: 287 MPDVV---TFTSLIHVMCKAGNLE---WAVTLVRQMRE-RGLQMNEVTFTALIDGFCKKG 339
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A R P+V YN L+NG+ + +A EM + + P+VVT
Sbjct: 340 FLDDA--LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVT 397
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ YC+ A L ++M ++G+ P+AI Y+++I L E R + + + +
Sbjct: 398 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMI 457
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYTSL+ G+CK G++E A + M+ G LP TY+ SK +
Sbjct: 458 KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 517
Query: 267 DAMNLYRKMIESGYTPDRLTYH---------------ILLKILCKEDKLDLAIQVSKEMK 311
+A L K+ P Y LLK C + ++ A +V + M
Sbjct: 518 EAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSML 577
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
R ++D ++LIH CR +A + + M++RG P+ + L + GM
Sbjct: 578 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVV 637
Query: 372 LA----QKLCNVMS 381
A Q+L N S
Sbjct: 638 EADQVIQQLLNCCS 651
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 114/286 (39%), Gaps = 52/286 (18%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ + CK +A E ++ L++ P Y+ L+ K + DA +
Sbjct: 398 YSTIISAYCKNCDTHSAFEL--NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKN 455
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K + P+ TY +L++G+C+ V+RA+ L +M K G+ P+ + Y+ +I+GL ++ R
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Query: 195 FEEVSGMMERFLVCEPGPTMV--------------------------------------- 215
E ++ + EP P
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 575
Query: 216 -----------TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
Y+ L+ G+C+AG++ A K M+ RGF P+ T+ R + G
Sbjct: 576 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGM 635
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
V +A + ++++ D L+ + E +D + V M
Sbjct: 636 VVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGM 681
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQG+V A
Sbjct: 341 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA R++ +M E ++P + Y +L+
Sbjct: 395 LVFSKMRQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
C + D+A L+ EM GI + I +N++ID + GR E + + + P
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY++L+ GYC AG ++ A+K+L M+S G P TYN + K ++EDA+ L+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M SG +PD +TY+I+L+ L + + A ++ + G ++L T +++H LC+
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+++ L TF + K G A+ L +S+
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL LC + R + A E + P V Y ++NG+F+ ++ A + E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY +++ C+ + +D+A+ ++ M K G+ PN YN+++ G +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G +++ P +VTY SL+ CK G A K+ M RG P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ G + + L M+ +G P+ + IL+ K+ K+D A+ V +M+ +G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ D T +I +LC+ + ++A FE MI L P + + L
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 162/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ G V+ A+ F + + + ++ LCK GRV+ A YF
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQ----QGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++ A+ LEM + + + + ++++ +C
Sbjct: 433 EQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++P+ I Y+T+IDG AG+ +E + ++ + P V
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYCK +E A + + M S G P TYN + + + A LY +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK + D A+++ + + ++ T ++I L ++ +
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F + GLVP T+ + + ++G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 9/361 (2%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
GG PD VS + +I + + G ++ A T+ + ++ N + + ++ +L
Sbjct: 192 GGDCPPDVVS---YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT----YSSIIAAL 244
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK + A E + P R YN +++G+ S K+A F +M + V P
Sbjct: 245 CKAQAMDKAMEVLTSM--VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVTY +L++ C+ R A ++ M K G++P Y T++ G G E+ G++
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P ++ L+ Y K G ++ A + M +G P TY K
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+VEDAM + +MI+ +P + Y+ L+ LC DK D A ++ EM RG +D
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I C+ + E+ F+ M+R G+ P +T+ L D + G A KL M S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 383 V 383
V
Sbjct: 543 V 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 138 ENVTPNVVTYGTLV-----------------------------------EGYCRLRRVDR 162
+ VTPN+ TYG L+ +G C +R
Sbjct: 85 DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144
Query: 163 AIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTY 217
A+ +V + M + G PN YN ++ GL + R +E +++ ++ + G P +V+Y
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ--MMPDDGGDCPPDVVSY 202
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T+++ G+ K GDL+ A M+ RG LP+ TY+ K ++ AM + M++
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G P+ TY+ ++ C + AI K+M G + D+ T L+ LC+ + E
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F+ M +RGL P T+ L + +G L ++M
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P YN L+NG+ + ++DA + E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSV--GMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G + A + + + G +P TY+
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G T + R+ I+ K+L + D
Sbjct: 695 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 179/379 (47%), Gaps = 14/379 (3%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
+L ++ FD AW + +++ V D S F I+I+ G EA + F L
Sbjct: 133 LLIRSNYFDKAW-WIFNELKSKVVLDAYS---FGIMIK-----GCCEAGYFVKGF-RLLA 182
Query: 64 MVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
M++ F ++ L+D CK G V A F K L P Y++L+NG+F+
Sbjct: 183 MLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRL--GLVPNPHTYSVLMNGFFK 240
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
++ + + M++ + PN Y L+ YC VD+A ++ EMR++GI +
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMT 300
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I GL +F E ++ + P +VTY L+ G+C G ++ A ++ +
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S G P+ TYN +SK + A++L ++M E P ++TY IL+ + + +
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTE 420
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ M+ G D+ T ++LIH LC EAS F+ + L P+ + + +
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI 480
Query: 362 DEFKKRGMTALAQKLCNVM 380
+ K G + A +L N M
Sbjct: 481 HGYCKEGSSYRALRLLNEM 499
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 19/347 (5%)
Query: 19 LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
+D++G VP+ T+ +L+ + + G+ +E +V N A + L
Sbjct: 219 MDRLG--LVPN---PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN----AYAYNCL 269
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ C G V A + F + +E + A V YNIL+ G R K +A + ++ K
Sbjct: 270 ISEYCNGGMVDKAFKVFAEMRE--KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV 327
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGR 194
++PN+VTY L+ G+C + ++D A+RL +++ G+ P + YNT+I G + AG
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ V M ER + P+ VTYT L+ + + E A ++ +M G +P TY+
Sbjct: 388 LDLVKEMEERCI----APSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSV 443
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +++A L++ + E P+ + Y+ ++ CKE A+++ EM G
Sbjct: 444 LIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
++ + I LLCR K+ EA MI GL P +K ++
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVH 550
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LI Y GMV+ A F K G + IL+ LC+ + A + HK
Sbjct: 269 LISEYCNGGMVDKAFKVFAEMRE----KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
++ S P + YNIL+NG+ + A R + +++ ++P +VTY TL+ GY ++
Sbjct: 325 NKVGLS--PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382
Query: 159 RVDRAIRLVKEMR-----------------------------------KEGIEPNAIVYN 183
+ A+ LVKEM K G+ P+ Y+
Sbjct: 383 NLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYS 442
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL G +E S + + P V Y +++ GYCK G A ++L M+
Sbjct: 443 VLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
G +P+ ++ + K ++A L +MI SG P Y ++ K+
Sbjct: 503 GMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 7/283 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+Y+ ++N + S + A F M E P T+ L+ R D+A + E+
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+ + + +A + +I G EAG F + + M+E F + P +V YT+L+ G CK
Sbjct: 151 KSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGL---SPNVVIYTTLIDGCCKY 206
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G++ A + M G +P+P TY+ F K G + +Y M SG P+ Y
Sbjct: 207 GNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAY 266
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ L+ C +D A +V EM+ +G + T +LI LCR KF EA + +
Sbjct: 267 NCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
GL P+ +T+ L + F G A +L N + S S L+
Sbjct: 327 VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 176/351 (50%), Gaps = 13/351 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD V+ + +++ RAG VEAA+ + MV K G + +L L + G
Sbjct: 192 PDVVTHN---VMVDARFRAGDVEAAMALID-----SMVSKGIKPGLVTYNSVLKGLLRNG 243
Query: 87 RVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
R A E F + +D AP VR +N+L+ G+ R+ +++A RF+ EMR VTP+VV
Sbjct: 244 RWDKAREVF---RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVV 300
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
++ L+ + R +D A ++EMR+ G+ P+ ++Y VI G AG E + +
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +VTY +L+ G CK L A ++L M RG P T+ + + G +
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E A+ + + + PD +TY+ L+ +C++ L A ++ +M R + T ++L
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
I C + D A A ++M+ +G+VP+ +T+ + + + G + Q+
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 161/358 (44%), Gaps = 11/358 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +A E + A + G PD VS F LI + R G ++ A
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVS---FSCLIGLFTRRGEMDHAAEYLREMR 326
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGW 119
++ + ++ +++ C+ G + E R E+ P V YN LLNG
Sbjct: 327 EFGLMPD----GVIYTMVIGGFCRAGLML---EALRVRDEMVAFGCLPDVVTYNTLLNGL 379
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + + DAE EM++ V P++ T+ TL+ GYCR +++A++ + + + P+
Sbjct: 380 CKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDI 439
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+IDG+ G + + + + E P VTY+ L+ +C+ G ++ A L
Sbjct: 440 VTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+++G +P+ TYN + + + G V KM PD +TY+ L+ KE K
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ A + K M+ D T M+I EA ++ M RG+ P T+
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTY 617
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 170/356 (47%), Gaps = 17/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWT----F 56
+I + + E D A L + +PD V + ++I + RAG++ A+
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGV---IYTMVIGGFCRAGLMLEALRVRDEMV 361
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
F D+V + LL+ LCK+ R+ A E ++ KE + P + + L+
Sbjct: 362 AFGCLPDVVT--------YNTLLNGLCKERRLSDAEELLNEMKE--RGVPPDLCTFTTLI 411
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ R N++ A +F+ + + + P++VTY TL++G CR + +A L +M I
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIF 471
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + Y+ +ID E G+ + ++ + P ++TY S++KGYC++G++ +
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M +P TYN + K GK+ +A NL + M PD +TY++++
Sbjct: 532 LPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSV 591
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ A V K+M RG + D T +I+ ++ ++M+++GL P
Sbjct: 592 HGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 156/334 (46%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F +LI + RAG +E A+ ++ + + S F L+ ++G + A+EY
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVS----FSCLIGLFTRRGEMDHAAEY 321
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ +E P +Y +++ G+ R+ + +A R EM P+VVTY TL+ G
Sbjct: 322 LREMREF--GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ RR+ A L+ EM++ G+ P+ + T+I G G E+ + P +
Sbjct: 380 CKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDI 439
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ G C+ GDL A+++ M SR P+ TY+ + G+V++A +
Sbjct: 440 VTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G P+ +TY+ ++K C+ + Q +M+ DL T LIH + K
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EA + M + P +T+ + F G
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHG 593
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 153/324 (47%), Gaps = 41/324 (12%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
NI+++ + ++ + + EM K V P+VVT+ +V+ R V+ A+ L+ M
Sbjct: 163 NIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVS 222
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+GI+P + YN+V+ GL+ GR+++ + C P + ++ L+ G+C+AG+LE
Sbjct: 223 KGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEE 282
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-------YT---- 281
A + K M R P +++ F++ G+++ A R+M E G YT
Sbjct: 283 ALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIG 342
Query: 282 ------------------------PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
PD +TY+ LL LCKE +L A ++ EMK RG
Sbjct: 343 GFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP 402
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
DL T T LIH CR ++A F+ + + L P +T+ L D ++G A +L
Sbjct: 403 DLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELW 462
Query: 378 NVMSS---VPRSME---LLDSRCK 395
+ M S P + L+DS C+
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCE 486
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y R G +E A+ F+ ++ + + + + L+D +C+QG + A+E
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT----YNTLIDGMCRQGDLGKANEL 461
Query: 95 F---HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ H R+ P Y+IL++ V +A F EM + + PN++TY +++
Sbjct: 462 WDDMHSREIF-----PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GYCR V + + + +MR + + P+ I YNT+I G V+ G+ E +++
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ 576
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VTY ++ G+ G+++ A + K M +RG P TY G + + L
Sbjct: 577 PDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636
Query: 272 YRKMIESGYTPD 283
+ +M++ G PD
Sbjct: 637 HDEMLQKGLAPD 648
>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 738
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 193/397 (48%), Gaps = 25/397 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++++L + + + A C+L D G V++D FV LI Y RAG+V+ ++ F+
Sbjct: 125 IVQILGRYSKLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAGIVQESVKLFKKMK 184
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A Y++ L++S PT YNILL G F
Sbjct: 185 ELGVDRTVKSYDALFKVIL----RRGRYMMAKRYYNAM--LNESVEPTRHTYNILLWGMF 238
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S + A RF+ +M+ + P+VVTY TL+ GY R ++V+ A +L EM+ I PN I
Sbjct: 239 LSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVI 298
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ T++ G V AG+ ++ + E C P VT+++L+ G C A + A +L M
Sbjct: 299 SFTTMLKGYVAAGQIDDALKVFEEMKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEM 358
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ R P F + S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 359 VERYIAPKDNA--VFMKLMSCQCKAGDLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKA 416
Query: 298 DKLDLAIQ-----VSKEMKCRG--------CDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+ D A + + KE+ R +++ ++I LC + +A F
Sbjct: 417 NLYDKAEKLLDKMIEKEIVLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQ 476
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++++G V ++F L K G A ++ +M
Sbjct: 477 LMKKG-VQDSVSFNNLICGHSKEGNPDSAFEIIKIMG 512
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 34/365 (9%)
Query: 9 KEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNF 68
K+ + A L ++ G VP+ +S F +++ Y AG ++ A+ FE + N
Sbjct: 276 KKVEEAEKLFVEMKGRDIVPNVIS---FTTMLKGYVAAGQIDDALKVFEEMKGCGVKPN- 331
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR-VYNILLNGWFRSKNVKD 127
A F LL LC ++ A + + E + AP V+ L++ ++ ++
Sbjct: 332 ---AVTFSTLLPGLCDAEKMAEARDVLGEMVE--RYIAPKDNAVFMKLMSCQCKAGDLDA 386
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI------------ 175
A M + ++ YG L+E +C+ D+A +L+ +M ++ I
Sbjct: 387 AGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDKMIEKEIVLRQKNAYETEL 446
Query: 176 ---EPNAIVYNTVIDGLVEAGRFEEVSGMMERF---LVCEPGPTMVTYTSLVKGYCKAGD 229
EP+A YN +I L E GR +G E F L+ + V++ +L+ G+ K G+
Sbjct: 447 FEMEPSA--YNLMIGYLCEHGR----TGKAETFFRQLMKKGVQDSVSFNNLICGHSKEGN 500
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A +I+K+M RG +Y + + G+ DA M+ESG+ P+ Y
Sbjct: 501 PDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRS 560
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+++ L + ++ A +V K M +G ++D + ++ L +EA ++ G
Sbjct: 561 VMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEALGRIHLLMLNG 620
Query: 350 LVPHY 354
P +
Sbjct: 621 CEPDF 625
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 15/259 (5%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKE----LDQSWAPTVRV-------YNILLNGWF 120
A + +L+++ CK A + K E L Q A + YN+++
Sbjct: 403 AGHYGVLIENFCKANLYDKAEKLLDKMIEKEIVLRQKNAYETELFEMEPSAYNLMIGYLC 462
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
AE F+ ++ K+ V + V++ L+ G+ + D A ++K M + G+ +A
Sbjct: 463 EHGRTGKAETFFRQLMKKGVQ-DSVSFNNLICGHSKEGNPDSAFEIIKIMGRRGVARDAD 521
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I+ + G + ++ L P Y S+++ G ++ AS+++K M
Sbjct: 522 SYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSM 581
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G + + G VE+A+ ++ +G PD + LL +LC+++K
Sbjct: 582 VEKGVKENMDLVSKVLEALLMRGHVEEALGRIHLLMLNGCEPD---FDHLLSVLCEKEKT 638
Query: 301 DLAIQVSKEMKCRGCDIDL 319
A+++ + R C ID
Sbjct: 639 IAALKLLDFVLERDCIIDF 657
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 112/278 (40%), Gaps = 39/278 (14%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYF--------------------HKRKELDQSWAP 107
F+ S + +++ LC+ GR A +F H ++ S
Sbjct: 447 FEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKGVQDSVSFNNLICGHSKEGNPDSAFE 506
Query: 108 TVRV------------YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+++ Y +L+ + R DA+ M + P Y +++E
Sbjct: 507 IIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLF 566
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPGPT 213
RV A R++K M ++G++ N + + V++ L+ G EE G + ++ CEP
Sbjct: 567 DDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEALGRIHLLMLNGCEP--- 623
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ L+ C+ A K+L ++ R + + Y+ GK +A ++
Sbjct: 624 --DFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAYSILC 681
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
K++E G + D + L+K L +E A +S+ +K
Sbjct: 682 KILEKGGSTDWSSRDELIKSLNQEGNTKQADVLSRMIK 719
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 150/295 (50%), Gaps = 6/295 (2%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+V +NI++N + +K A+ F M + PNVVTY T++ GYC RV+ A +
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIF 249
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
M+ G++P++ Y + I G+ + G+ EE SGM+E+ PT VTY +L+ GYC
Sbjct: 250 DLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNK 309
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G+LE A M+ G +P+ +TYN K+++A + ++M E G PD +TY
Sbjct: 310 GNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTY 369
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+IL+ C+ + A + EM +G T T LI++L + + +A FE ++R
Sbjct: 370 NILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVR 429
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALA---QKLCNVMSSVPRSM---ELLDSRCKD 396
+G+ P + F L D G A K + M VP + L+ RC++
Sbjct: 430 KGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCRE 484
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 37/334 (11%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S F I+++ LCK+G++K A E+ + L P V YN +++G+ V+ A
Sbjct: 189 SSVVTFNIMINVLCKEGKLKKAKEFIGLMEAL--GIKPNVVTYNTIIHGYCSRGRVEGAR 246
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ M+ V P+ TYG+ + G C+ +++ A ++++M++ G+ P A+ YNT+IDG
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306
Query: 190 VEAGRFEEV---------SGMMER-----------FLVC-------------EPG--PTM 214
G E G+M FL C E G P
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ GYC+ G+++ A + MIS+G P+ TY SK G+++ A +L+ K
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ G PD + ++ L+ C +D A + KEM D T L+ CR K
Sbjct: 427 IVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGK 486
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ A E+M RG+ P ++++ L + KRG
Sbjct: 487 VEAARELIEEMKSRGIKPDHISYNTLISGYSKRG 520
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L+D C +G ++ A +Y + K + + PTV YN+L++ F + +A+
Sbjct: 296 AVTYNTLIDGYCNKGNLEMAFDY--RDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGI 353
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM ++ + P+ VTY L+ GYCR V +A L EM +GI+P + Y ++I L +
Sbjct: 354 IKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSK 413
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR ++ + E+ + P ++ + +L+ G+C G+++ A +LK M +P T
Sbjct: 414 RGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVT 473
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + + GKVE A L +M G PD ++Y+ L+ K + A +V EM
Sbjct: 474 FNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEML 533
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G + L T LI LC+ + D A ++MI +G+ P+ T+ L
Sbjct: 534 SIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSL 582
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 171/356 (48%), Gaps = 15/356 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KAKEF L++ +G P+ V+ +T +I Y G VE A F+
Sbjct: 207 LKKAKEFIG----LMEALGIK--PNVVTYNT---IIHGYCSRGRVEGARMIFDLMK---- 253
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ + + + +CK+G+++ AS K KE+ PT YN L++G+ N
Sbjct: 254 CRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEI--GLRPTAVTYNTLIDGYCNKGN 311
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
++ A + +M +E + P V TY L+ ++D A ++KEM ++G+ P+++ YN
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+G G ++ + + + PT VTYTSL+ K G ++ A + + ++ +G
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P +N G ++ A + ++M + PD +T++ L++ C+E K++ A
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ +EMK RG D + LI + +A ++M+ G P LT+ L
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNAL 547
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 151/292 (51%), Gaps = 6/292 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y G +E A F++ + + + + S + +L+ +L ++ A
Sbjct: 298 TYNTLIDGYCNKGNLEMA---FDYRDKM-VREGLMPTVSTYNMLIHALFLDCKMDEADGI 353
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ E + P YNIL+NG+ R NVK A EM + + P VTY +L+
Sbjct: 354 IKEMSE--KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVL 411
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ R+ +A L +++ ++GI P+ I++N +IDG G + M++ + P
Sbjct: 412 SKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDE 471
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+ +L++G C+ G +E A ++++ M SRG P +YN +SK G ++DA + +
Sbjct: 472 VTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 531
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
M+ G+ P LTY+ L++ LCK ++ D A Q+ KEM +G + +T LI
Sbjct: 532 MLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 114/218 (52%), Gaps = 2/218 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL++ C+ G VK A + + + + PT Y L+ + +K A+ + +
Sbjct: 369 YNILINGYCRCGNVKKA--FTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ ++ + P+++ + L++G+C +DRA ++KEM + + P+ + +NT++ G G+
Sbjct: 427 IVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGK 486
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++E P ++Y +L+ GY K GD++ A ++ M+S GF P+ TYN
Sbjct: 487 VEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNA 546
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
+ K + + A L ++MI G TP+ TY L++
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + F LI + G ++ A F +D +K + F L+ C++G+
Sbjct: 434 PDLI---MFNALIDGHCANGNMDRA---FAMLKEMDQMKVVPDEVT-FNTLMQGRCREGK 486
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+AA E + K + P YN L++G+ + ++KDA R EM P ++TY
Sbjct: 487 VEAARELIEEMKS--RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTY 544
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
L++G C+ D A +L+KEM +GI PN Y ++I+G+
Sbjct: 545 NALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 42/231 (18%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQ 85
VPD V T+ ILI Y R G V+ A F + +M+ K + L+ L K+
Sbjct: 363 VPDSV---TYNILINGYCRCGNVKKA-----FTLHDEMISKGIQPTRVTYTSLIYVLSKR 414
Query: 86 GRVKAASEYFHK--------------------------------RKELDQ-SWAPTVRVY 112
GR+K A + F K KE+DQ P +
Sbjct: 415 GRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTF 474
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N L+ G R V+ A EM+ + P+ ++Y TL+ GY + + A R+ EM
Sbjct: 475 NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
G P + YN +I GL + + +++ + P TY SL++G
Sbjct: 535 IGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 35/196 (17%)
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
T V Y L++ C+ + A + MM +G +P N F K + E A LY
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ--------------------------- 305
+M +T++I++ +LCKE KL A +
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239
Query: 306 --------VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ MKCRG D T I +C+ K +EAS E M GL P +T+
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299
Query: 358 KRLNDEFKKRGMTALA 373
L D + +G +A
Sbjct: 300 NTLIDGYCNKGNLEMA 315
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 13/382 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ KA EFD ++ + PD V+ + +++ RAG EAA+ +
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHN---VMVDARFRAGDAEAAMALVD--- 215
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNG 118
MV K G + +L LC+ G A E F KE+D AP VR + IL+ G
Sbjct: 216 --SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF---KEMDDFGVAPDVRSFTILIGG 270
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ R +++A + + EMR + P++V++ L+ + R ++D A+ ++EMR G+ P+
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 330
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++Y VI G AG + + + + C P +VTY +L+ G CK L A +L
Sbjct: 331 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 390
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M RG P T+ + GK++ A+ L+ M+ PD +TY+ L+ +C++
Sbjct: 391 EMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 450
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
LD A + +M R + T ++LI C + ++A ++MI +G++P+ +T+
Sbjct: 451 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 510
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
+ + + G + QK M
Sbjct: 511 SIIKGYCRSGNVSKGQKFLQKM 532
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 164/331 (49%), Gaps = 11/331 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS F LI +AR G ++ A+ +V + ++ +++ C+ G
Sbjct: 294 PDLVS---FSCLIGLFARRGKMDHAMAYLREMRCFGLVPD----GVIYTMVIGGFCRAGL 346
Query: 88 VKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ S+ R E+ P V YN LLNG + + + DAE EMR+ V P++ T
Sbjct: 347 M---SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 403
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ TL+ GYC ++D+A++L M + + P+ + YNT+IDG+ G ++ + + +
Sbjct: 404 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 463
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E P VTY+ L+ +C+ G +E A L MI++G LP+ TYN + + + G V
Sbjct: 464 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 523
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+KM+ + +PD +TY+ L+ KEDK+ A ++ M+ D+ T MLI
Sbjct: 524 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 583
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ EA FE M +G+ P T+
Sbjct: 584 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 614
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 181/384 (47%), Gaps = 19/384 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKD--TFVILIRRYARAGMVEAAIWTFE 57
++K L ++ +D AW + E+ DF V+ D +F ILI + R G +E A+ ++
Sbjct: 232 VLKGLCRSGMWDKAWEVF------KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYK 285
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ + + S F L+ ++G++ A Y + + P +Y +++
Sbjct: 286 EMRHRGIKPDLVS----FSCLIGLFARRGKMDHAMAYLREMRCF--GLVPDGVIYTMVIG 339
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ R+ + DA R EM P+VVTY TL+ G C+ RR+ A L+ EMR+ G+ P
Sbjct: 340 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 399
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + T+I G G+ ++ + + L P +VTY +L+ G C+ GDL+ A+ +
Sbjct: 400 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M SR P+ TY+ + G+VEDA +MI G P+ +TY+ ++K C+
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ + ++M DL T LIH + K +A M + + P +T+
Sbjct: 520 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 579
Query: 358 KRLNDEFKKRGMTALA----QKLC 377
L + F G A +K+C
Sbjct: 580 NMLINGFSVHGNVQEAGWIFEKMC 603
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 183/400 (45%), Gaps = 28/400 (7%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K +E A+ L+LD H VP + L+ +RAG W A+ +V
Sbjct: 101 KPREAFEAFRLILD----HRVP--IPAAASNALLAALSRAG------WPHLAADAYRLVF 148
Query: 67 NFDSGASLF--EILLDSLCKQ---GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ +S + + I++ + CK +V A KR P V +N++++ FR
Sbjct: 149 SSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKR-----CVFPDVVTHNVMVDARFR 203
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ + + A M + + P +VTY ++++G CR D+A + KEM G+ P+
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 263
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+ +I G G EE + + P +V+++ L+ + + G ++ A L+ M
Sbjct: 264 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G +P Y F + G + DA+ + +M+ G PD +TY+ LL LCKE +L
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + EM+ RG DL T T LIH C K D+A F+ M+ + L P +T+ L
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443
Query: 362 DEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
D ++G A L + M S P + L+DS C+
Sbjct: 444 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 483
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y G ++ A+ F+ N + + + + L+D +C+QG + A++
Sbjct: 403 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT----YNTLIDGMCRQGDLDKANDL 458
Query: 95 F---HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ H R+ P Y+IL++ V+DA F EM + + PN++TY +++
Sbjct: 459 WDDMHSREIF-----PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GYCR V + + +++M + P+ I YNT+I G ++ + + ++ +
Sbjct: 514 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 573
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VTY L+ G+ G+++ A I + M ++G P TY G ++A L
Sbjct: 574 PDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 633
Query: 272 YRKMIESGYTPD 283
+ +M++ G+ PD
Sbjct: 634 HDEMLQRGFAPD 645
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 187/361 (51%), Gaps = 22/361 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDLWVLMIDSYGKAGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A YF+K L + PT +N+++ G+F
Sbjct: 108 ELGVERTIKSYDALFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNVMMWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ + P+VVTY T+V GYCR+++++ A + EM+ IEP +
Sbjct: 162 LSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V R ++ +E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S K G ++ A N+ + MI + Y +L++ CK
Sbjct: 282 VDKYI--APTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKA 339
Query: 298 DKLDLAIQ-----VSKEMKCR-GCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRG 349
+ D AI+ + K++ R + +++S LI LC + +A A +++ G
Sbjct: 340 GEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLG 399
Query: 350 L 350
+
Sbjct: 400 V 400
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKNSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ C+ K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S M L+ +CK
Sbjct: 250 GMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCK 303
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 138/304 (45%), Gaps = 21/304 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MVNGYCRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDRVDDALRFVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
M N A + LL LC ++ A ++ +D+ APT ++ L++G
Sbjct: 248 GFGMKPN----AITYSTLLPGLCNAEKMSEARSIL--KEMVDKYIAPTDNSIFMRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI--EP 177
++ ++ A M + +V YG L+E YC+ D+AI+L+ ++ ++ I P
Sbjct: 302 CKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRP 361
Query: 178 NAIV------YNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDL 230
+ + YN +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALN--TLIRGHSQEGSP 419
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++LK+M+ R + Y+ + + K + DA MIE+G+ PD + +
Sbjct: 420 DSAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSV 479
Query: 291 LKIL 294
++ L
Sbjct: 480 MESL 483
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 162/310 (52%), Gaps = 5/310 (1%)
Query: 43 YARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD 102
YA+ M+E + F + M+ + + + +L D + + A E ++ E
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRD---RDSSIDVAREVYNVMVEC- 184
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
PTV YN +L+ + + V++A + L+M+K PN VTY LV G +++
Sbjct: 185 -GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQ 243
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A L++EM + G+E +A Y+ +I G E G+ +E S + E L PT+VTY +++
Sbjct: 244 AKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMY 303
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CK G + A K+L +M+++ +P +YN +++ G + +A L+ ++ G P
Sbjct: 304 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVP 363
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+TY+ L+ LC+ LD+A+++ EM G D D+ T T+L+ C++ A F
Sbjct: 364 SVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELF 423
Query: 343 EDMIRRGLVP 352
++M+ RGL P
Sbjct: 424 DEMLNRGLQP 433
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 180/376 (47%), Gaps = 15/376 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ K + A LLL +P+ V T+ +L+ + +G +E A +
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDV---TYNVLVNGLSHSGELEQAKELIQ--- 249
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M++ + A ++ L+ C++G++ AS + L + PT+ YN ++ G
Sbjct: 250 --EMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRL--GEEMLSRGAVPTLVTYNTIMYGL 305
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V DA + M +N+ P++V+Y TL+ GY RL + A L E+R G+ P+
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSV 365
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+IDGL G + + + + P P + T+T LV+G+CK G+L A ++
Sbjct: 366 VTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDE 425
Query: 240 MISRGFLPSPTTYNYFFRYFS--KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M++RG P + Y R K G A + +M+ G+ PD +TY++ + L K
Sbjct: 426 MLNRGL--QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKL 483
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A ++ K+M G D T T +IH +A A F +M+ +G+ P +T+
Sbjct: 484 GNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTY 543
Query: 358 KRLNDEFKKRGMTALA 373
L + RG LA
Sbjct: 544 TVLIHSYAVRGRLKLA 559
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 17/360 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS +T LI Y R G + A F +V + + + L+D LC+ G
Sbjct: 327 MPDLVSYNT---LIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT----YNTLIDGLCRMG 379
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A K + + P V + IL+ G+ + N+ A+ + EM + P+
Sbjct: 380 DLDVAMRL--KDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFA 437
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T + G +L +A + +EM G P+ I YN IDGL + G +E S ++++ L
Sbjct: 438 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 497
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P VTYTS++ + AG L A + M+S+G PS TY ++ G+++
Sbjct: 498 YNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 557
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ + +M E G P+ +TY+ L+ LCK K+D A + EM+ +G + T T+LI
Sbjct: 558 LAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVP----HYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ C + + EA ++DM+ R + P H K LN ++K + + + L NV+++
Sbjct: 618 NENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK----SHVVRHLENVIAA 673
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 14/334 (4%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
VS T+ LIR Y G ++ A E + V + + ++ LCK GRV
Sbjct: 258 VSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVT----YNTIMYGLCKWGRVSD 313
Query: 91 ASEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
A RK LD ++ P + YN L+ G+ R N+ +A + E+R + P+VVT
Sbjct: 314 A------RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL++G CR+ +D A+RL EM K G +P+ + ++ G + G + + L
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P Y + + G K GD A + + M++RGF P TYN F K G ++
Sbjct: 428 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 487
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L +KM+ +G PD +TY ++ L A V EM +G + T T+LI
Sbjct: 488 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLI 547
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
H + A F +M +G+ P+ +T+ L
Sbjct: 548 HSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 581
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 136/260 (52%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R ++ A + M + + P VVTY T+++ +C+ +V A++L+ +M+K G PN +
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +++GL +G E+ +++ L + TY L++GYC+ G L+ AS++ + M
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+SRG +P+ TYN K+G+V DA L M+ PD ++Y+ L+ + +
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + E++ RG + T LI LCRM D A ++MI+ G P TF L
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406
Query: 361 NDEFKKRGMTALAQKLCNVM 380
F K G +A++L + M
Sbjct: 407 VRGFCKLGNLPMAKELFDEM 426
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 39/249 (15%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC--EPGPTMVTYTSLVKG-YCKA 227
R+ G + + + Y ++D L G +ME+ + E G V L+ Y K
Sbjct: 73 RQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKK 132
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYF-SKFGKVEDAMNLYRKMIESGYTPDRLT 286
LE + M+S+G LP N R + ++ A +Y M+E G P +T
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVT 192
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGC------------------------------- 315
Y+ +L CK+ K+ A+Q+ +M+ GC
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 316 ----DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
++ T LI C + DEAS E+M+ RG VP +T+ + K G +
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312
Query: 372 LAQKLCNVM 380
A+KL +VM
Sbjct: 313 DARKLLDVM 321
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 10/360 (2%)
Query: 18 LLDK-IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
L DK IG P+ V T+ LI + G AAI N ++
Sbjct: 159 LFDKMIGEGFQPNVV---TYGTLINGLCKVGNTNAAIRLLRSMEQ----GNCQPDVVVYT 211
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++DSLCK +V A F K + Q +P + Y L++ K +M
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKM--VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ P+VV + T+V+ C+ ++ A +V M G+EPN + YN ++DG +
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + + + P +++Y +L+ GYCK ++ A+ + + M + +P+ TYN
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
G+++DA+ L+ +M+ G PD TY ILL LCK+ LD A+ + K ++ D
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 449
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+ T++I +CR + + A F ++ +GL P+ T+ + + +RG+ A KL
Sbjct: 450 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 155/330 (46%), Gaps = 9/330 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L E+ LL I +PD V F ++ + G + A +
Sbjct: 248 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVV---IFSTVVDALCKEGKITEAHDVVDMM- 303
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + + L+D C Q + A + F + +AP V YN L+NG+
Sbjct: 304 ---IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM--VHNGYAPNVISYNTLINGYC 358
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + + A + EM ++ + PN VTY TL+ G C + R+ AI L EM G P+
Sbjct: 359 KIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLA 418
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++D L + +E +++ P + YT ++ G C+AG+LE A I +
Sbjct: 419 TYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 478
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S+G P+ TY + G +++A L+ +M +G +PD TY+ + + L + +
Sbjct: 479 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 538
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
AIQ+ +EM RG D+ T+T+L+ +LC
Sbjct: 539 LRAIQLLQEMLARGFSADVSTTTLLVEMLC 568
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 147/305 (48%), Gaps = 3/305 (0%)
Query: 56 FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
F +N +D IL++S C R A K +L P + L
Sbjct: 87 FSLSNQMDSF-GIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKL--GLQPDTATFTTL 143
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ G + DA + +M E PNVVTYGTL+ G C++ + AIRL++ M +
Sbjct: 144 IRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNC 203
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+P+ +VY ++ID L + + E + + + P + TYTSL+ C + + +
Sbjct: 204 QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTT 263
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L MI+ +P ++ K GK+ +A ++ MI G P+ +TY+ L+ C
Sbjct: 264 LLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC 323
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ ++D A++V M G ++ + LI+ C++ + D+A+ FE+M ++ L+P+ +
Sbjct: 324 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTV 383
Query: 356 TFKRL 360
T+ L
Sbjct: 384 TYNTL 388
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L P+ +N LL ++K +M + P+V T L+ +C L R
Sbjct: 59 LHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRP 118
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A ++ ++ K G++P+ + T+I GL G+ + + ++ + P +VTY +L
Sbjct: 119 GFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTL 178
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK G+ A ++L+ M P Y K +V +A NL+ KM+ G
Sbjct: 179 INGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGI 238
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+PD TY L+ LC + + +M D+ + ++ LC+ K EA
Sbjct: 239 SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHD 298
Query: 341 EFEDMIRRGLVPHYLTFKRLND 362
+ MI RG+ P+ +T+ L D
Sbjct: 299 VVDMMIIRGVEPNVVTYNALMD 320
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 15/296 (5%)
Query: 112 YNILLNGWFRSKNVK-----DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
++ L + F SK++ DA + M + P+ V + L+ + ++ L
Sbjct: 30 FSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 89
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M GI P+ N +I+ R ++ + L P T+T+L++G C
Sbjct: 90 SNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCV 149
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A + MI GF P+ TY K G A+ L R M + PD +
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LCK+ ++ A + +M +G D+ T T LIH LC + ++ + MI
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME--------LLDSRC 394
++P + F + D K G A + ++M + R +E L+D C
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM--IIRGVEPNVVTYNALMDGHC 323
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L A L + + ++PD T+ IL+ + ++ A+ +
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLA---TYRILLDYLCKKSHLDEAMALLKTIEG--- 445
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
N D ++ I++D +C+ G ++AA + F + P VR Y I++NG R
Sbjct: 446 -SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS--KGLRPNVRTYTIMINGLCRRGL 502
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +A + ++EM +P+ TY T+ +G + + RAI+L++EM G +
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 562
Query: 185 VIDGLVEAGRFEEVSGMMERFL 206
+++ L + + V ++ F+
Sbjct: 563 LVEMLCDDKLDQSVKQILSEFV 584
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 160/310 (51%), Gaps = 7/310 (2%)
Query: 93 EYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E +H E L Q P + +N L++ + NV+++E+ + ++ K V PN+ T+ +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G CR +D A RL++ + EG+ P+ I YNT+I G + + E + + +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P TY +++ G+CKAG ++ A KIL+ + +GF+P TY+ G + AM +
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ + +E G+ + Y+ L+K L K+ + A+Q+ K+M GC D+ T ++++ LC+
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF-KKRGMTALAQKLCNVMS-----SVPR 385
M +A+ D I +G +P TF L D + K+R M + L ++S V
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498
Query: 386 SMELLDSRCK 395
LL+ CK
Sbjct: 499 YNTLLNGLCK 508
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 200/402 (49%), Gaps = 18/402 (4%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I+ L + D A LL + PD +S +T + ++++ +VEA + + N+
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSK--LVEAECYLHKMVNS 315
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ + +++ CK G ++ A + R + + + P Y+ L+NG
Sbjct: 316 -----GVEPNEFTYNTIINGFCKAGMMQNADKIL--RDAMFKGFIPDEFTYSSLINGLCN 368
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
++ A + E ++ +++ Y TLV+G + V +A++L+K+M + G P+
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN V++GL + G + +G++ + P + T+ +L+ GYCK +++ A +IL M+
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S G P TYN K K+++ ++ ++ M+E G TP+ +TY+IL++ CK+ K+
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT--FKR 359
A+++ KEMK RG D+ T LI LC + D+A F I + Y T F
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV-TIEKEYKFSYSTAIFNI 607
Query: 360 LNDEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
+ + F ++ ++A+KL + M P + ++DS CK
Sbjct: 608 MINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 165/388 (42%), Gaps = 45/388 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA +A +L D + +PD + T+ LI G + A+ F A
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPD---EFTYSSLINGLCNDGDMNRAMAVFYEA- 382
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
M K F L+ L+ L KQG V A + + ++ +P + YN+++NG
Sbjct: 383 ---MEKGFKHSIILYNTLVKGLSKQGLVLQALQLM--KDMMEHGCSPDIWTYNLVVNGLC 437
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + DA + + P++ T+ TL++GYC+ R +D+AI ++ M GI P+ I
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+++GL +A + + V + L P ++TY L++ +CK + A ++ K M
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557
Query: 241 ISRGFLP------------------------------------SPTTYNYFFRYFSKFGK 264
+RG P S +N F +
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLN 617
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V A L+ KM S PD TY +++ CK +DLA E +G T
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGK 677
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+++ LC ++ EA M++ G+VP
Sbjct: 678 VLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 154/342 (45%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ ++R Y R G V+ A+ FE + D + S ++ IL++ G A +
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE----YGYFSQAHKV 133
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + K D P V + I + + + A R M + N V+Y ++ G+
Sbjct: 134 YMRMK--DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ A L EM K+GI P+ + +N +I L + G +E + + + P +
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T+ ++G C+ G ++ A+++L+ ++S G P +YN F K K+ +A K
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ SG P+ TY+ ++ CK + A ++ ++ +G D T + LI+ LC
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ A A F + + +G + + L K+G+ A +L
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 9/321 (2%)
Query: 63 DMVKNFDSG--ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M KN DS ++ ++ ++G+V+ A F + D P+V+ YN ++N
Sbjct: 65 EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYD--CEPSVQSYNAIMNILV 122
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
A + ++ M+ + P+V T+ ++ +C R A+RL+ M +G E NA+
Sbjct: 123 EYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VI G + E + + L P ++T+ L+ CK G+++ + K+ +
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG P+ T+N F + + G +++A L ++ G TPD ++Y+ L+ CK KL
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A +M G + + T +I+ C+ A D + +G +P T+ L
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 361 -----NDEFKKRGMTALAQKL 376
ND R M + +
Sbjct: 363 INGLCNDGDMNRAMAVFYEAM 383
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 38/248 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D CKQ + A E L P V YN LLNG +++ + + +
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ TPN++TY L+E +C+ R+V A+ L KEM+ G+ P+ + T+I GL G
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 195 FEE------------------------VSGMMERFLVC------------EPGPTMVTYT 218
++ ++ E+ V + P TY
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ YCK G+++ A L IS+G +PS TT ++ +A+ + M+++
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Query: 279 GYTPDRLT 286
G P+ +
Sbjct: 702 GIVPEEVN 709
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 198/398 (49%), Gaps = 25/398 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIK+L + ++ + A C+LLD + VP +D FV+LI Y +AG+V+ ++ F+
Sbjct: 155 MIKMLGEVQKLNHARCILLD-MPEKGVP--WDEDMFVVLIESYGKAGIVQESVKIFQKMK 211
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L + + S +LF+++L ++GR A YF+K + + PT YN++L G+F
Sbjct: 212 DLGVERTIKSYNTLFKVIL----RRGRYMMAKRYFNKM--VSEGVEPTRHTYNLMLWGFF 265
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S ++ A RF+ +M+ ++P+ VTY T++ GYCR +++D A +L EM+ EP+ +
Sbjct: 266 LSLRLETALRFFDDMKTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVV 325
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G + R ++ + E P TY++L+ G C G + A ILK M
Sbjct: 326 TYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNM 385
Query: 241 ISRGFLPSPTTYNYFFRYF---SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ P + F + SK G + A + + M + Y +L++ CK
Sbjct: 386 MAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 443
Query: 298 DKLDLAIQ-----VSKEMKCRGCD-IDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRG 349
+ AI+ + KE+ R D ++++ S +I LC + +A F +++RG
Sbjct: 444 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 503
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPR 385
V L K G + ++ +MS VPR
Sbjct: 504 -VQDQDALNNLIRGHAKEGNPESSYEILKIMSRRGVPR 540
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 161/383 (42%), Gaps = 28/383 (7%)
Query: 9 KEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNF 68
K+ D A L ++ G + P V T+ +I+ Y V+ + FE + + N
Sbjct: 303 KKMDEAEKLFVEMKGNNSEPSVV---TYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPN- 358
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKD 127
A+ + LL LC G++ A + + + AP ++ LL ++ ++
Sbjct: 359 ---ATTYSTLLPGLCDVGKMVEAKNIL--KNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA 413
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI----------EP 177
A M NV YG L+E C+ +RAI+L+ + ++ I EP
Sbjct: 414 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 473
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+A YN +I+ L G+ + ++ R L+ +L++G+ K G+ E + +IL
Sbjct: 474 SA--YNPIIEYLCNNGQTAKAE-VLFRQLMKRGVQDQDALNNLIRGHAKEGNPESSYEIL 530
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K+M RG Y + + G+ DA M+E G+ PD + +++ L ++
Sbjct: 531 KIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFED 590
Query: 298 DKLDLAIQVSKEM--KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
++ A +V M K G + ++D ++ L +EA + + + G H
Sbjct: 591 GRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNG---HTA 647
Query: 356 TFKRLNDEFKKRGMTALAQKLCN 378
L ++G T A KL +
Sbjct: 648 DLDSLLSVLSEKGKTIAALKLLD 670
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
Y +L+ + DA+ M ++ P+ + +++E RV A R++ M
Sbjct: 544 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFEDGRVQTASRVMMIM 603
Query: 171 --RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+ GIE N + +++ L+ G EE G ++ L+ + G T SL+ + G
Sbjct: 604 IDKNVGIEDNMDLIAKILEALLMRGHVEEALGRID--LLNQNGHT-ADLDSLLSVLSEKG 660
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A K+L + R ++Y+ GK +A ++ K++E G + D +
Sbjct: 661 KTIAALKLLDFGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSD 720
Query: 289 ILLKILCKEDKLDLAIQVSKEMK 311
L+K L +E A +S+ +K
Sbjct: 721 ELIKSLNQEGNTKQADVLSRMIK 743
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 160/310 (51%), Gaps = 7/310 (2%)
Query: 93 EYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E +H E L Q P + +N L++ + NV+++E+ + ++ K V PN+ T+ +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G CR +D A RL++ + EG+ P+ I YNT+I G + + E + + +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P TY +++ G+CKAG ++ A KIL+ + +GF+P TY+ G + AM +
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ + +E G+ + Y+ L+K L K+ + A+Q+ K+M GC D+ T ++++ LC+
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF-KKRGMTALAQKLCNVMS-----SVPR 385
M +A+ D I +G +P TF L D + K+R M + L ++S V
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498
Query: 386 SMELLDSRCK 395
LL+ CK
Sbjct: 499 YNTLLNGLCK 508
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 174/341 (51%), Gaps = 9/341 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I+ L + D A LL + PD +S +T + ++++ +VEA + + N+
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSK--LVEAECYLHKMVNS 315
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ + +++ CK G ++ A + R + + + P Y+ L+NG
Sbjct: 316 -----GVEPNEFTYNTIINGFCKAGMMQNADKIL--RDAMFKGFIPDEFTYSSLINGLCN 368
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
++ A + E ++ +++ Y TLV+G + V +A++L+K+M + G P+
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN V++GL + G + +G++ + P + T+ +L+ GYCK +++ A +IL M+
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S G P TYN K K+++ ++ ++ M+E G TP+ +TY+IL++ CK+ K+
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
A+++ KEMK RG D+ T LI LC + D+A F
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 164/388 (42%), Gaps = 45/388 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I KA +A +L D + +PD + T+ LI G + A+ F A
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPD---EFTYSSLINGLCNDGDMNRAMAVFYEA- 382
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
M K F L+ L+ L KQG V A + + ++ +P + YN+++NG
Sbjct: 383 ---MEKGFKHSIILYNTLVKGLSKQGLVLQALQLM--KDMMEHGCSPDIWTYNLVVNGLC 437
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + DA + + P++ T+ TL++GYC+ R +D+AI ++ M GI P+ I
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+++GL +A + + V + L P ++TY L++ +CK + A ++ K M
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557
Query: 241 ISRGFLP------------------------------------SPTTYNYFFRYFSKFGK 264
+RG P S +N F
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLN 617
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V A L+ KM S PD TY +++ CK +DLA E +G T
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGK 677
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+++ LC ++ EA M++ G+VP
Sbjct: 678 VLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 154/342 (45%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ ++R Y R G V+ A+ FE + D + S ++ IL++ G A +
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE----YGYFSQAHKV 133
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + K D P V + I + + + A R M + N V+Y ++ G+
Sbjct: 134 YMRMK--DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ A L EM K+GI P+ + +N +I L + G +E + + + P +
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T+ ++G C+ G ++ A+++L+ ++S G P +YN F K K+ +A K
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ SG P+ TY+ ++ CK + A ++ ++ +G D T + LI+ LC
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ A A F + + +G + + L K+G+ A +L
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 9/321 (2%)
Query: 63 DMVKNFDSG--ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M KN DS ++ ++ ++G+V+ A F + D P+V+ YN ++N
Sbjct: 65 EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYD--CEPSVQSYNAIMNILV 122
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
A + ++ M+ + P+V T+ ++ +C R A+RL+ M +G E NA+
Sbjct: 123 EYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VI G + E + + L P ++T+ L+ CK G+++ + K+ +
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG P+ T+N F + + G +++A L ++ G TPD ++Y+ L+ CK KL
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A +M G + + T +I+ C+ A D + +G +P T+ L
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 361 -----NDEFKKRGMTALAQKL 376
ND R M + +
Sbjct: 363 INGLCNDGDMNRAMAVFYEAM 383
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 38/248 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D CKQ + A E L P V YN LLNG +++ + + +
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ TPN++TY L+E +C+ R+V A+ L KEM+ G+ P+ + T+I GL G
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 195 FEEV--------------------------------SGMMERFLVCEPG----PTMVTYT 218
++ M E+ G P TY
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ YCK G+++ A L IS+G +PS TT ++ +A+ + M+++
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Query: 279 GYTPDRLT 286
G P+ +
Sbjct: 702 GIVPEEVN 709
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 171/343 (49%), Gaps = 12/343 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFE-FANNL---DMVKNFDSGASLFEILLDSLCKQG 86
+++ F+++ + +A + A+ F AN+L VK+F+S +L+ + ++G
Sbjct: 98 LTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNS-------VLNVIIQEG 150
Query: 87 RVKAASE-YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
A + Y H + + P + YN+++ + + A + EM +N P+V
Sbjct: 151 DFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVF 210
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL+ G C+ RRVD A+ L+ EM+ EG PN + +N +ID L + G + +++
Sbjct: 211 TYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM 270
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTY +L+ G C G L+ A +L+ M+S +P+ TY K +
Sbjct: 271 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA 330
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
ED +++ M E G + Y L+ L KE K + A+++ KEM +GC ++
Sbjct: 331 EDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAF 390
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
I LCR K DEA ++M+ +G +P+ T+ L F K+G
Sbjct: 391 IDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 433
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 190/401 (47%), Gaps = 28/401 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE---VPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++ V+ + +F A+ L G + P+ + T+ ++I+ + G ++ A+ TF
Sbjct: 142 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLL---TYNLIIKALCKLGQIDRAVDTFR 198
Query: 58 FANNLDM-VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+M +KN + + L++ LCK+ RV A + + + P +N+L+
Sbjct: 199 -----EMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA--EGCLPNPVTFNVLI 251
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ ++ ++ A + M + PN VTY TL+ G C ++D+A+ L+++M
Sbjct: 252 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 311
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + Y T+I+GLV+ R E+ ++ Y+SL+ G K G E A ++
Sbjct: 312 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 371
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M +G P+ Y F + K ++A ++ ++M+ G+ P+ TY L+K K
Sbjct: 372 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 431
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ AI V KEM + ++ ++L++ LC + EA + M+ GL P +
Sbjct: 432 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVA 491
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL-DSRCKD 396
+ +++ + LC+V SV + ++L + +C++
Sbjct: 492 Y------------SSMIKGLCDV-GSVDKGLKLFYEMQCQE 519
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 151/331 (45%), Gaps = 11/331 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K + A L+ + VP+ V+ +T LI G ++ A+ E
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT---LIHGLCLKGKLDKALSLLEKMV 306
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V N + +++ L KQ R + +E Q +Y+ L++G F
Sbjct: 307 SSKCVPN----QVTYGTIINGLVKQRRAEDGVHILMSMEERGQK--ANEYIYSSLISGLF 360
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++A R W EM ++ PNVV YG ++G CR + D A +++EM +G PNA
Sbjct: 361 KEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAF 420
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y++++ G + G ++ + + + + +V + L+ G C++G L A + M
Sbjct: 421 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHM 480
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM--IESGYTPDRLTYHILLKILCKED 298
+ G P Y+ + G V+ + L+ +M E PD +TY+IL LC++D
Sbjct: 481 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 540
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L AI + M GCD D T + + L
Sbjct: 541 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 8/222 (3%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
T+ L+E Y R +++ M++EG ++ + +A E R
Sbjct: 66 ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 125
Query: 205 F---LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYFFRY 258
L C+ T+ ++ S++ + GD A K + S+GF P+ TYN +
Sbjct: 126 MANDLHCKQ--TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKA 183
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K G+++ A++ +R+M PD TY L+ LCKE ++D A+ + EM+ GC +
Sbjct: 184 LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 243
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T +LI L + A+ ++M +G VP+ +T+ L
Sbjct: 244 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 285
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA-SE 93
T+ L++ + + G + AI ++ + DM N +LL+ LC+ GR++ A +
Sbjct: 421 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN----VVCCSVLLNGLCESGRLREALTV 476
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR--KENVTPNVVTYGTLV 151
+ H L + P V Y+ ++ G +V + + EM+ + P+VVTY L
Sbjct: 477 WTHM---LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 533
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
CR + RAI L+ M EG +P+++ N ++ L E + P
Sbjct: 534 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER--------------INPPQ 579
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ LV K A +I++ M+ R P P+T++ + K ++ + ++
Sbjct: 580 DGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 179/382 (46%), Gaps = 46/382 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I Y R +++A FE N +D + + A+ + L++ LC GRV A ++
Sbjct: 265 TYTSMILGYCRNRDLDSA---FEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEALDF 320
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ PTV + + ++DA + +++M+K+ PNV TY +L+ G
Sbjct: 321 ISEMTR--HGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG- 377
Query: 155 CRLRRVDR-AIRLVKEMRKEGIEPNAIVYNTVIDGLVEA--------------------- 192
+RV R AI L M ++G+ PN + YN +++ L+E
Sbjct: 378 ---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPN 434
Query: 193 --------------GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
G E+ M+ L P PT+VTY ++KGYC +GD + A ++L+
Sbjct: 435 TSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLE 494
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+M + G P +Y F K K+E A ++ +M++ G P+ +TY L+ CK++
Sbjct: 495 LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDE 554
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
KLD A ++ + MK GC ++ T +LIH L + F A + M+ + P +T+
Sbjct: 555 KLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYS 614
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
+ + G LA ++ N M
Sbjct: 615 TVINGLCNNGAIPLALEMFNKM 636
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 129/254 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P YN L+ G+ + + A M K TP +VTY +++GYC D AIR+
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++ M+ G +P+ Y +I G + + E SGM + P VTYT+L+ GYCK
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
L+ A+++L+ M G P+ TYN +K A L + M+E +PD +T
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LC + LA+++ +M GC +L T + LI L + + +EA F ++
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Query: 347 RRGLVPHYLTFKRL 360
++GL+P +T+ ++
Sbjct: 673 KQGLIPDEVTYVKM 686
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 163/389 (41%), Gaps = 74/389 (19%)
Query: 44 ARAGMVEAAIWTFEFANNLDMVKNFDS-----GASLFEILLDSLCKQGRVKAASEYFHKR 98
AR M+++ E L+ + F G + LL L K + +H+
Sbjct: 160 ARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQI 219
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
L + P + +YN ++N + NV+DAE ++ K + P+ TY +++ GYCR R
Sbjct: 220 --LREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNR 277
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+D A + M +EG EPNA Y+T+I+GL +GR E + PT+ T+T
Sbjct: 278 DLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFT 337
Query: 219 SLVKGYCKAGDLEGASKILKMM--------------------ISR------------GFL 246
+ + C G +E A KI M +SR G +
Sbjct: 338 APIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVV 397
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG--------------------------- 279
P+ TYN + +++ A+ ++ M + G
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSM 457
Query: 280 --------YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
TP +TY+I++K C D+AI+V + MK GC D + T LI C+
Sbjct: 458 LTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCK 517
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ K + AS F +M+ RGL P+ +T+ L
Sbjct: 518 ISKMELASGMFNEMMDRGLCPNEVTYTAL 546
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 153/327 (46%), Gaps = 11/327 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ VL + E DSA ++ + +G H + ++ LIR Y G E A+
Sbjct: 406 LMNVLMENMEIDSAL-IVFNMMGKHGC--LPNTSSYNELIRGYCTIGDTEKAMSMLT--- 459
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + + + I++ C G A K P Y L++G+
Sbjct: 460 --NMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA--NGCQPDEWSYTELISGF 515
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++ A + EM + PN VTY L+ GYC+ ++D A R+++ M++ G PN
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNV 575
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN +I GL + F + + L + P +VTY++++ G C G + A ++
Sbjct: 576 QTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNK 635
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G LP+ TY+ + + G+VE+A ++ ++ + G PD +TY ++++ K
Sbjct: 636 MVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGK 695
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+D A EM GC L T +LI
Sbjct: 696 VDRAFDFLGEMINAGCQPTLQTYDVLI 722
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
PT+ YNI++ G+ S + A R M+ P+ +Y L+ G+C++ +++ A
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASG 526
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+ EM G+ PN + Y +I G + + + + M+ER P + TY L+ G
Sbjct: 527 MFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K + GA ++ K+M+ P TY+ G + A+ ++ KM++ G P+
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L++ L +E +++ A ++ E+K +G D T +I + K D A +M
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706
Query: 346 IRRGLVPHYLTF----KRLNDEFKKRGMTALAQ 374
I G P T+ K L +E + AL
Sbjct: 707 INAGCQPTLQTYDVLIKGLQNEMVYHKLVALPN 739
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 151/338 (44%), Gaps = 28/338 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y + ++ A E N + + +L+ L KQ A E
Sbjct: 542 TYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQT----YNVLIHGLTKQNNFSGAEEL 597
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ L++ +P V Y+ ++NG + + A + +M K PN+ TY +L++
Sbjct: 598 C--KVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ RV+ A + E++K+G+ P+ + Y +I+ V +G+ + + + PT+
Sbjct: 656 GQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTL 715
Query: 215 VTYTSLVKG------YCKAGDLEGASK------------ILKMMISR----GFLPSPTTY 252
TY L+KG Y K L A+ ++ ++ S+ F S Y
Sbjct: 716 QTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLY 775
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ S+ G+ +A NLYR M+ P++ TY L L + K+DLA+ V K M
Sbjct: 776 DALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSD 835
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C++ L LI LC++++ EA FE M+ R L
Sbjct: 836 QRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRAL 873
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
++Y+ LL+ RS +A + M ++ PN TY + R +VD A+ + K
Sbjct: 773 QLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKH 832
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
M + E + Y +I L + R +E + E+ L + +T L+ G AG
Sbjct: 833 MSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 170/349 (48%), Gaps = 6/349 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +L+R R G + +A F+ + + + S F ++ +C+ G + A E
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS----FNTMISGMCRAGDLDGA-ETL 297
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
H+R + P V Y L+ G R ++DA + +M + PN V + L++ +C
Sbjct: 298 HRRMS-EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + + L +EMR+ G+ P+A+ YN +++GL A + SG++ P V
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TYT+L+ GYCK +L+ A +I + M++ G TY SK G+ DA + +M
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+E+G PD TY +++ C++ + +++ KEM+ +G + T ++++ C++ +
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 536
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
A MI G+ P +T+ L D K G ++L + +VP
Sbjct: 537 KNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVP 585
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 133/270 (49%), Gaps = 4/270 (1%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
LD P +++N+L+ R + A+ + EM+ V VV++ T++ G CR +
Sbjct: 232 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDL 291
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYT 218
D A L + M + G+ P+ Y +I GL GR E+ G+ E+ C G P V +T
Sbjct: 292 DGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM--CGRGMKPNAVVFT 349
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L+ +CK GD E ++ + M RG P TYN + ++ A + +M +
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY L+ CKE++LD+A+++ + M G +D T T LI L + + +A
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+M+ GL P T+ + D F ++G
Sbjct: 470 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R +A F+L++ + P + L+ RL + A + EM+ G+ +
Sbjct: 217 RFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVV 276
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I G+ AG + + R P + TY +L++G C+ G +E A + + M
Sbjct: 277 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG P+ + K G E + L+R+M E G PD +TY+ ++ LC+ L
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + EM+ G D T T LI C+ + D A ++M+ G+ +T+ L
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 456
Query: 361 NDEFKKRGMTALAQKLCNVM 380
K G +A A+++ M
Sbjct: 457 ISGLSKAGRSADAERVLGEM 476
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 38/180 (21%)
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
Y + G L A ++ + + RG PT+ S+F +A Y +++++G P+
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLM---SRFPTAPEACAFYLQLLDAGLPPE 239
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMK------------------CRGCDI-------- 317
+++L++ L + +L A V EM+ CR D+
Sbjct: 240 AKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHR 299
Query: 318 ---------DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T LI LCR+ + ++A FE M RG+ P+ + F L D K+G
Sbjct: 300 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 359
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 171/343 (49%), Gaps = 12/343 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFE-FANNL---DMVKNFDSGASLFEILLDSLCKQG 86
+++ F+++ + +A + A+ F AN+L VK+F+S +L+ + ++G
Sbjct: 122 LTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNS-------VLNVIIQEG 174
Query: 87 RVKAASE-YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
A + Y H + + P + YN+++ + + A + EM +N P+V
Sbjct: 175 DFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVF 234
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL+ G C+ RRVD A+ L+ EM+ EG PN + +N +ID L + G + +++
Sbjct: 235 TYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM 294
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTY +L+ G C G L+ A +L+ M+S +P+ TY K +
Sbjct: 295 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA 354
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
ED +++ M E G + Y L+ L KE K + A+++ KEM +GC ++
Sbjct: 355 EDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAF 414
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
I LCR K DEA ++M+ +G +P+ T+ L F K+G
Sbjct: 415 IDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 457
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 190/401 (47%), Gaps = 28/401 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE---VPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++ V+ + +F A+ L G + P+ + T+ ++I+ + G ++ A+ TF
Sbjct: 166 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLL---TYNLIIKALCKLGQIDRAVDTFR 222
Query: 58 FANNLDM-VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+M +KN + + L++ LCK+ RV A + + + P +N+L+
Sbjct: 223 -----EMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA--EGCLPNPVTFNVLI 275
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ ++ ++ A + M + PN VTY TL+ G C ++D+A+ L+++M
Sbjct: 276 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 335
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + Y T+I+GLV+ R E+ ++ Y+SL+ G K G E A ++
Sbjct: 336 PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRL 395
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M +G P+ Y F + K ++A ++ ++M+ G+ P+ TY L+K K
Sbjct: 396 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 455
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ AI V KEM + ++ ++L++ LC + EA + M+ GL P +
Sbjct: 456 KGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVA 515
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL-DSRCKD 396
+ +++ + LC+V SV + ++L + +C++
Sbjct: 516 Y------------SSMIKGLCDV-GSVDKGLKLFYEMQCQE 543
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 151/331 (45%), Gaps = 11/331 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K + A L+ + VP+ V+ +T LI G ++ A+ E
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT---LIHGLCLKGKLDKALSLLEKMV 330
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V N + +++ L KQ R + +E Q +Y+ L++G F
Sbjct: 331 SSKCVPN----QVTYGTIINGLVKQRRAEDGVHILMSMEERGQK--ANEYIYSSLISGLF 384
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++A R W EM ++ PNVV YG ++G CR + D A +++EM +G PNA
Sbjct: 385 KEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAF 444
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y++++ G + G ++ + + + + +V + L+ G C++G L A + M
Sbjct: 445 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHM 504
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM--IESGYTPDRLTYHILLKILCKED 298
+ G P Y+ + G V+ + L+ +M E PD +TY+IL LC++D
Sbjct: 505 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 564
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L AI + M GCD D T + + L
Sbjct: 565 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 8/222 (3%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
T+ L+E Y R +++ M++EG ++ + +A E R
Sbjct: 90 ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 149
Query: 205 F---LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYFFRY 258
L C+ T+ ++ S++ + GD A K + S+GF P+ TYN +
Sbjct: 150 MANDLHCKQ--TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKA 207
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K G+++ A++ +R+M PD TY L+ LCKE ++D A+ + EM+ GC +
Sbjct: 208 LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 267
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T +LI L + A+ ++M +G VP+ +T+ L
Sbjct: 268 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 309
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA-SE 93
T+ L++ + + G + AI ++ + DM N +LL+ LC+ GR++ A +
Sbjct: 445 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN----VVCCSVLLNGLCESGRLREALTV 500
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR--KENVTPNVVTYGTLV 151
+ H L + P V Y+ ++ G +V + + EM+ + P+VVTY L
Sbjct: 501 WTHM---LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 557
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
CR + RAI L+ M EG +P+++ N ++ L E + P
Sbjct: 558 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER--------------INPPQ 603
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ LV K A +I++ M+ R P P+T++ + K ++ + ++
Sbjct: 604 DGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G A +K ++ P V +YN +++G + K++ DA + E
Sbjct: 19 YGVVVNGLCKRGDTDLAFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 76
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I P+ ++ +ID V+ G+
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P++VTY+SL+ G+C L+ A ++ + M+S+ P TYN
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 196
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K+ +VE+ M ++R+M + G + +TY+IL++ L + D+A ++ KEM G
Sbjct: 197 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T L+ LC+ K ++A FE + R + P T+ + + K G
Sbjct: 257 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 137/266 (51%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ P + Y +++NG + + A +M + + P V+ Y T+++G C+ + +D
Sbjct: 10 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 69
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ L KEM +GI PN + Y+++I L GR+ + S ++ + + P + T+++L+
Sbjct: 70 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 129
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
+ K G L A K+ M+ R PS TY+ F ++++A ++ M+ P
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +TY+ L+K CK +++ ++V +EM RG + T +LI L + D A F
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRG 368
++M+ G+ P+ +T+ L D K G
Sbjct: 250 KEMVSDGVPPNIMTYNTLLDGLCKNG 275
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 171/350 (48%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +++ + G + A F N ++ K + G ++ ++D LCK
Sbjct: 14 PDLV---TYGVVVNGLCKRGDTDLA---FNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKH 66
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F KE++ + P V Y+ L++ DA R +M + + P+V T
Sbjct: 67 MDDALNLF---KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A +L EM K I+P+ + Y+++I+G R +E M E +
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +L+KG+CK +E ++ + M RG + + TYN + + G +
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A ++++M+ G P+ +TY+ LL LCK KL+ A+ V + ++ + + T ++I
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++ F ++ +G+ P + + + F ++G A L
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 353
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 135/268 (50%), Gaps = 6/268 (2%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P++VTYG +V G C+ D A L+ +M + +EP ++YNT+IDGL +
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P +VTY+SL+ C G AS++L MI R P T++
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+ +A LY +M++ P +TY L+ C D+LD A Q+ + M +
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ T LI C+ + +E F +M +RGLV + +T+ L + G +AQ
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246
Query: 375 KLCNVMSS--VPRSM----ELLDSRCKD 396
++ M S VP ++ LLD CK+
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKN 274
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 176/376 (46%), Gaps = 24/376 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K D A L + P+ V+ + + + Y R W+
Sbjct: 57 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR--------WSDASRL 108
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ + + F L+D+ K+G++ A + + + + +S P++ Y+ L+NG+
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGF 166
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +A++ + M ++ P+VVTY TL++G+C+ +RV+ + + +EM + G+ N
Sbjct: 167 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN +I GL +AG + + + + P ++TY +L+ G CK G LE A + +
Sbjct: 227 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 286
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ P+ TYN K GKVED +L+ + G PD + Y+ ++ C++
Sbjct: 287 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 346
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD-EASAEFEDMIRR---------- 348
+ A + KEMK G + LI R+ D EASAE +R
Sbjct: 347 KEEADALFKEMKEDGTLPNSGCYNTLIR--ARLRDGDREASAELIKEMRSCGFAGDASTI 404
Query: 349 GLVPHYLTFKRLNDEF 364
GLV + L RL+ F
Sbjct: 405 GLVTNMLHDGRLDKSF 420
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
++ M+++G P TY K G + A NL KM + P L Y+ ++ LC
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K +D A+ + KEM+ +G ++ T + LI LC ++ +AS DMI R + P
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
TF L D F K G A+KL + M V RS++
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEM--VKRSID 153
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 171/333 (51%), Gaps = 8/333 (2%)
Query: 27 VPDFVSKDTFV--ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCK 84
V + +S + ++ I++ YA+ M++ A+ F + + IL+D+LCK
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ----HGLSPDVVTYGILIDALCK 491
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
GRV A F++ ++ P V+N L+ G + AE + EM + V PNV
Sbjct: 492 LGRVDDAVLKFNQM--INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNV 549
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
V + T++ C +V A RL+ M + G+ PN I YNT+I G AGR +E + +++
Sbjct: 550 VFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV 609
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P +++Y +L++GYCK G ++ A + + M+ +G P TY+ + +
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+A LY MI+SG D TY+I+L LCK + +D A ++ + + + ++ T T+
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+I +L + + +A F + GLVP+ +T+
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 174/367 (47%), Gaps = 20/367 (5%)
Query: 1 MIKVLAKAKEFDSAWCLL---LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++K L K + A LL + GG+ P+ V+ +T +I +A V+ A +
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT---IIDGLCKAQAVDRAEGVLQ 223
Query: 58 FANNLDMVKNFDSGASL----FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYN 113
D G L + ++D LCK V A +D+ P V YN
Sbjct: 224 HM--------IDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHM--IDKGVKPDVVTYN 273
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+++G +++ V AE M + V P+VVTY T+++G C+ + VDRA +++ M +
Sbjct: 274 TIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK 333
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
++P+ YN +I G + G ++EV +E P +VTY+ L+ CK G A
Sbjct: 334 DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEA 393
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
KI MI +G P+ T Y ++ G + D +L M+ +G +P+ ++I+L
Sbjct: 394 RKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCA 453
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
K+ +D A+ + M G D+ T +LI LC++ + D+A +F MI G+ P+
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513
Query: 354 YLTFKRL 360
+ F L
Sbjct: 514 SVVFNSL 520
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 148/306 (48%), Gaps = 6/306 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL C+ GR++ F L W V N LLNG +K V +A L
Sbjct: 93 YSILTGCFCRLGRIEHGFAAFGLI--LKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150
Query: 135 MRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG---IEPNAIVYNTVIDGLV 190
E PNVV+ TL++G C +RV+ A+ L+ M ++G PN + YNT+IDGL
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+A + G+++ + +VTY++++ G CKA ++ A +L+ MI +G P
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K V+ A + + MI+ G PD +TY+ ++ LCK +D A V + M
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ D+ T LIH ++ E E+M RGL P +T+ L D K G
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390
Query: 371 ALAQKL 376
A+K+
Sbjct: 391 TEARKI 396
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 195/454 (42%), Gaps = 82/454 (18%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L I PD T+ LI Y G + + E
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDI---QTYNCLIHGYLSTGEWKEVVRRLEEM- 365
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ D + +LLD LCK G+ A + F+ + + P V +Y ILL+G+
Sbjct: 366 ---YARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCM--IRKGIKPNVTIYGILLHGYA 420
Query: 121 RSKNVKD-----------------------------------AERFWLEMRKENVTPNVV 145
+ D A + M + ++P+VV
Sbjct: 421 ARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVV 480
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV------- 198
TYG L++ C+L RVD A+ +M +G+ PN++V+N+++ GL R+E+
Sbjct: 481 TYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540
Query: 199 --SGMMERFL--------VCEPG------------------PTMVTYTSLVKGYCKAGDL 230
G+ + +C G P +++Y +L+ G+C AG
Sbjct: 541 WDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRT 600
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A+++L +M+S G P +Y+ R + K G++++A L+R+M+ G TP +TY +
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L+ L + A ++ M G D+ T ++++ LC+ DEA F+ + + L
Sbjct: 661 LQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
P+ +TF + D K G A L +S+P
Sbjct: 721 RPNIITFTIMIDVLFKGGRKKDAMDL---FASIP 751
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 172/390 (44%), Gaps = 9/390 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L I PD V+ +T +I +A V+ A +
Sbjct: 240 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT---IIDGLCKAQAVDRAEGVLQHMI 296
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + ++D LCK V A +D+ P ++ YN L++G+
Sbjct: 297 D----KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM--IDKDVKPDIQTYNCLIHGYL 350
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K+ R EM + P+VVTY L++ C+ + A ++ M ++GI+PN
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y ++ G G +++ +++ + P + ++ Y K ++ A I M
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P TY K G+V+DA+ + +MI G TP+ + ++ L+ LC D+
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A ++ EM +G ++ ++ LC + A + M R G+ P+ +++ L
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTL 590
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
G T A +L +VM SV +L+
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 44/326 (13%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ ILI + G V+ A+ F N + N + +F L+ LC R
Sbjct: 477 PDVV---TYGILIDALCKLGRVDDAVLKFNQMINDGVTPN----SVVFNSLVYGLCTVDR 529
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E F + DQ P V +N ++ V A+R M + V PNV++Y
Sbjct: 530 WEKAEELFFEM--WDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISY 587
Query: 148 GTLV-----------------------------------EGYCRLRRVDRAIRLVKEMRK 172
TL+ GYC+ R+D A L +EM +
Sbjct: 588 NTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLR 647
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+G+ P A+ Y+T++ GL RF E + + + TY ++ G CK ++
Sbjct: 648 KGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDE 707
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A KI + + S+ P+ T+ K G+ +DAM+L+ + G P+ +TY I++K
Sbjct: 708 AFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMK 767
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDID 318
+ +E LD + M+ GC D
Sbjct: 768 NIIQEGLLDEFDNLFLAMEKSGCTPD 793
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAE---RFWLEMRK---ENVTPNVVTYGTLVEGY 154
L + +VR +N LLN R++ +E + M + V P++ TY L +
Sbjct: 41 LPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCF 100
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
CRL R++ + K G N +V N +++GL +A R +E ++ R + E G P
Sbjct: 101 CRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMP-EFGCMP 159
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRG---FLPSPTTYNYFFRYFSKFGKVEDAM 269
+V+ +L+KG C +E A ++L M G P+ TYN K V+ A
Sbjct: 160 NVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAE 219
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ + MI+ G D +TY ++ LCK +D A V + M +G D+ T +I L
Sbjct: 220 GVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 279
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
C+ D A + MI +G+ P +T+ + D K
Sbjct: 280 CKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 316
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 159/372 (42%), Gaps = 17/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L I PD V+ +T +I +A V+ A +
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT---IIDGLCKAQAVDRADGVLQHMI 331
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA----PTVRVYNILL 116
+ D+ + + L L + E+ + L++ +A P V Y++LL
Sbjct: 332 DKDVKPDIQTYNCLIHGYL----------STGEWKEVVRRLEEMYARGLDPDVVTYSLLL 381
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ ++ +A + + M ++ + PNV YG L+ GY + L+ M GI
Sbjct: 382 DYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGIS 441
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN ++N V+ + +E + R P +VTY L+ CK G ++ A
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK 501
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
MI+ G P+ +N + E A L+ +M + G P+ + ++ ++ LC
Sbjct: 502 FNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN 561
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E ++ +A ++ M+ G ++ + LI C + DEA+ + M+ GL P ++
Sbjct: 562 EGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLIS 621
Query: 357 FKRLNDEFKKRG 368
+ L + K G
Sbjct: 622 YDTLLRGYCKTG 633
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C GR A++ + P + Y+ LL G+ ++ + +A + E
Sbjct: 587 YNTLIGGHCLAGRTDEAAQLLDVMVSV--GLKPDLISYDTLLRGYCKTGRIDNAYCLFRE 644
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ VTP VTY T+++G RR A L M K G + + YN +++GL +
Sbjct: 645 MLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNC 704
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + P ++T+T ++ K G + A + + S G +P+ TY
Sbjct: 705 VDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCI 764
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + G +++ NL+ M +SG TPD + + +++ L ++ A ++
Sbjct: 765 MMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824
Query: 315 CDIDLDTSTMLIHLLCR 331
++ T+++LI L R
Sbjct: 825 FSLEASTTSLLISLFSR 841
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 2/309 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A F L++ LC +G++K A E F++ + + P V Y ++NG ++ N A
Sbjct: 163 AITFNALINGLCNEGKIKEAVELFNEM--VKRGHEPNVISYTTVINGLCKTGNTSMAVDV 220
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ +M + PNVVTY T+++ C+ R V+ A+ + EM + GI PN YN+++ G
Sbjct: 221 FKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCN 280
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E + + + + + P VT+T LV G CK G + A + + M +G P +T
Sbjct: 281 LGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIST 340
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + + +A ++ MI G P +Y+IL+ CK ++D A + EM
Sbjct: 341 YNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMY 400
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ + D T + L+ LC++ + EA F++M G P+ +T+ L D F K G
Sbjct: 401 HKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD 460
Query: 372 LAQKLCNVM 380
A KL M
Sbjct: 461 EALKLLKSM 469
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 179/379 (47%), Gaps = 15/379 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L + D + +L + K+G H PD + TF LI G ++ A+ F
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIH--PDAI---TFNALINGLCNEGKIKEAVELFN- 187
Query: 59 ANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+MVK + + +++ LCK G A + F K ++ P V Y+ +++
Sbjct: 188 ----EMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQ--NGCKPNVVTYSTIID 241
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + V DA F EM + + PNV TY ++V G+C L +++ A RL KEM + P
Sbjct: 242 SLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + + ++DGL + G E + E P + TY +L+ GYC + A K+
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
++MI +G P +YN + K ++++A +L +M PD +TY L++ LC+
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQL 421
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ A+ + KEM G +L T +L+ C+ DEA + M + L P+ + +
Sbjct: 422 GRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHY 481
Query: 358 KRLNDEFKKRGMTALAQKL 376
L + G +A++L
Sbjct: 482 TILIEGMFIAGKLEVAKEL 500
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 157/319 (49%), Gaps = 9/319 (2%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ + A L + +G +P+ V TF IL+ + GMV A FE K +
Sbjct: 283 QLNEATRLFKEMVGRDVMPNTV---TFTILVDGLCKEGMVSEARLVFETMTE----KGVE 335
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S + L+D C Q + A + F + + AP YNIL+NG+ +S+ + +A+
Sbjct: 336 PDISTYNALMDGYCLQRLMNEAKKVFEIM--IRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + + P+ VTY TL++G C+L R A+ L KEM G PN + Y ++DG
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G +E +++ + P +V YT L++G AG LE A ++ + G P
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDI 513
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY + K G ++A +L+RKM + G+ P+ +Y+++++ + AI++ E
Sbjct: 514 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 573
Query: 310 MKCRGCDIDLDTSTMLIHL 328
M + ++L T ML+ L
Sbjct: 574 MVGKRFSVNLSTFQMLLDL 592
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 23/342 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFA------------NNLDMVKNFDSGASLFEILLDSL 82
+F ++R R +VE + FA N +D+ + + SL IL++ L
Sbjct: 80 SFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSL-NILINCL 138
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C+ V + K +L P +N L+NG +K+A + EM K P
Sbjct: 139 CRLNHVDFSVSVLGKMFKL--GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEP 196
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGRFEEV 198
NV++Y T++ G C+ A+ + K+M + G +PN + Y+T+ID L + E +
Sbjct: 197 NVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFL 256
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
S M+ER + P + TY S+V G+C G L A+++ K M+ R +P+ T+
Sbjct: 257 SEMVERGI----PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K G V +A ++ M E G PD TY+ L+ C + ++ A +V + M +GC
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +LI+ C+ + DEA + +M + L P +T+ L
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+V + L + + K +M VT NV + L+ CRL VD ++ +
Sbjct: 91 PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K GI P+AI +N +I+GL G+ +E + + P +++YT+++ G CK
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ A + K M G P+ TY+ K V DAM +M+E G P+ T
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ C +L+ A ++ KEM R + T T+L+ LC+ EA FE M
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G+ P T+ L D + + + A+K+ +M
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIM 364
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 152/306 (49%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ C G++ A+ F ++ + + P + IL++G + V +A +
Sbjct: 271 YNSIVHGFCNLGQLNEATRLF--KEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V P++ TY L++GYC R ++ A ++ + M ++G P A YN +I+G ++ R
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ P VTY++L++G C+ G + A + K M S G P+ TY
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G +++A+ L + M E P+ + Y IL++ + KL++A ++ ++ G
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG 508
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T T++I L + DEA F M G +P+ ++ + F + ++ A
Sbjct: 509 TRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 568
Query: 375 KLCNVM 380
+L + M
Sbjct: 569 RLIDEM 574
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 5/270 (1%)
Query: 117 NGWFRSKN-----VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
N F S N V DA + M + N P+VV +G + + + ++ + L +M
Sbjct: 61 NDGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMD 120
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ N N +I+ L + ++ + P +T+ +L+ G C G ++
Sbjct: 121 LFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIK 180
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A ++ M+ RG P+ +Y K G A+++++KM ++G P+ +TY ++
Sbjct: 181 EAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTII 240
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LCK+ ++ A++ EM RG ++ T ++H C + + +EA+ F++M+ R ++
Sbjct: 241 DSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM 300
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
P+ +TF L D K GM + A+ + M+
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETMT 330
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G A +K ++ P V +YN +++G + K++ DA + E
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I P+ ++ +ID V+ G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P++VTY+SL+ G+C L+ A ++ + M+S+ P TYN
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K+ +VE+ M ++R+M + G + +TY+IL++ L + D+A ++ KEM G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T L+ LC+ K ++A FE + R + P T+ + + K G
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 184/402 (45%), Gaps = 15/402 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +AK +FD L +++ +P + T+ ILI + R + A+
Sbjct: 87 LLSAIAKMNKFDVVISLG-EQMQNLGIPH--NHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L N + +SL L+ C R+ A + + P +N L++G F
Sbjct: 144 KLGYEPNIVTLSSL----LNGYCHSKRISEAVALVDQM--FVTGYQPNTVTFNTLIHGLF 197
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+A M + P++VTYG +V G C+ D A L+ +M + +EP +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+YNT+IDGL + ++ + + P +VTY+SL+ C G AS++L M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I R P T++ F K GK+ +A LY +M++ P +TY L+ C D+L
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A Q+ + M + C D+ T LI C+ + +E F +M +RGLV + +T+ L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 361 NDEFKKRGMTALAQKLCNVMSS--VPRSM----ELLDSRCKD 396
+ G +AQ++ M S VP ++ LLD CK+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 136/262 (51%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y +++NG + + A +M + + P V+ Y T+++G C+ + +D A+ L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
KEM +GI PN + Y+++I L GR+ + S ++ + + P + T+++L+ + K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ M+ R PS TY+ F ++++A ++ M+ PD +T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ ++V +EM RG + T +LI L + D A F++M+
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P+ +T+ L D K G
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNG 480
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 171/350 (48%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +++ + G + A F N ++ K + G ++ ++D LCK
Sbjct: 219 PDLV---TYGVVVNGLCKRGDTDLA---FNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKH 271
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F KE++ + P V Y+ L++ DA R +M + + P+V T
Sbjct: 272 MDDALNLF---KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A +L EM K I+P+ + Y+++I+G R +E M E +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +L+KG+CK +E ++ + M RG + + TYN + + G +
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A ++++M+ G P+ +TY+ LL LCK KL+ A+ V + ++ + + T ++I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++ F ++ +G+ P + + + F ++G A L
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 176/376 (46%), Gaps = 24/376 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K D A L + P+ V+ + + + Y R W+
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR--------WSDASRL 313
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ + + F L+D+ K+G++ A + + + + +S P++ Y+ L+NG+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGF 371
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +A++ + M ++ P+VVTY TL++G+C+ +RV+ + + +EM + G+ N
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN +I GL +AG + + + + P ++TY +L+ G CK G LE A + +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ P+ TYN K GKVED +L+ + G PD + Y+ ++ C++
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD-EASAEFEDMIRR---------- 348
+ A + KEMK G + LI R+ D EASAE +R
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIR--ARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 349 GLVPHYLTFKRLNDEF 364
GLV + L RL+ F
Sbjct: 610 GLVTNMLHDGRLDKSF 625
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+GL E + ++ + + P P+++ ++ L+ K + + + M + G
Sbjct: 55 NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
+ TY+ F + ++ A+ + KM++ GY P+ +T LL C ++ A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+M G + T LIH L K EA A + M+ +G P +T+ + + K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 367 RGMTALAQKLCNVM 380
RG T LA L N M
Sbjct: 234 RGDTDLAFNLLNKM 247
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 163/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I YA+ GM++ A+ F + N + + L+D+LCK GRV A F
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN----YGALIDALCKLGRVDDAEVKF 432
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ P + V+N L+ G + AE EM + + PN V + TL+ C
Sbjct: 433 NQM--INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 490
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV RL+ M G+ P+A Y +I G GR +E + + + PT V
Sbjct: 491 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEV 550
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC A ++ A + + M+ +G P TYN + + +A LY M
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 610
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG D TY+I+L LCK + +D A ++ + + +G +++ T T++I L + +
Sbjct: 611 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 670
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLVP+ +T++ + + + G
Sbjct: 671 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 703
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 1/287 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ILL LC + R + A E H + + P V Y+I++NG+F V +L
Sbjct: 164 YTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFL 223
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + P+VVTY T+++G C+ + DRA + ++M G +PN YN +I G + G
Sbjct: 224 EMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIG 283
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+++EV M+E P TY SL+ CK G A MI +G P +TY
Sbjct: 284 KWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYG 343
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
++ G + + + M+E+G +PD ++I K +D A+ + +M+
Sbjct: 344 ILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH 403
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G ++ LI LC++ + D+A +F MI G+ P+ + F L
Sbjct: 404 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 450
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 177/436 (40%), Gaps = 75/436 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ FD A + I P+ T+ LI Y G + + E +
Sbjct: 240 VIDGLCKAQLFDRAEGVFQQMIDNGFKPN---NYTYNCLIHGYLSIGKWKEVVQMLEEMS 296
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKEL----------------- 101
+ + LL+ LCK GR + A +F RK +
Sbjct: 297 ----ARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATK 352
Query: 102 --------------DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P ++NI + + + + A + +MR+ ++PNVV Y
Sbjct: 353 GALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 412
Query: 148 GTLVEGYCRLRRVD-----------------------------------RAIRLVKEMRK 172
G L++ C+L RVD RA LV EM
Sbjct: 413 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 472
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+GI PNA+ +NT+I L GR E +++ P +YT L+ GYC G +
Sbjct: 473 QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDE 532
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A K+ M+S G P+ TYN + +++DA L+R+M+ G TP +TY+ +L
Sbjct: 533 AEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILH 592
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L + + A ++ M G D+ T ++++ LC+ DEA F+ + +GL
Sbjct: 593 GLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 652
Query: 353 HYLTFKRLNDEFKKRG 368
+ +TF + K G
Sbjct: 653 NIITFTIMIGALLKGG 668
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 139/358 (38%), Gaps = 45/358 (12%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNI---------------------------- 114
C A S + +E AP + Y+I
Sbjct: 64 CSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRM 123
Query: 115 -------LLNGWFRSKNVKDAERFWLE-MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
LL G K V +A L+ M + P+ V+Y L++G C +R + A+ L
Sbjct: 124 DHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALEL 183
Query: 167 VKEMRKEG---IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ M + PN + Y+ VI+G G+ ++ + + P +VTYT+++ G
Sbjct: 184 LHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDG 243
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
CKA + A + + MI GF P+ TYN + GK ++ + + +M G PD
Sbjct: 244 LCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPD 303
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
TY LL LCK + A M +G + T +LIH E + +
Sbjct: 304 CYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLD 363
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRCK 395
M+ GL P + F + K GM A + N M +V L+D+ CK
Sbjct: 364 LMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 421
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 10/278 (3%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAE----RFWLEMRK--ENVTPNVVTYGTLVEGY 154
L + +VR +N LL R++ +E F +R+ + V PN+ TY L+ +
Sbjct: 41 LHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRF 100
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF-EEVSGMMERFLVCEPGPT 213
CR+ ++ + K G + I N ++ GL R E + +++R P
Sbjct: 101 CRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPD 160
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
V+YT L+KG C E A ++L MM R P+ +Y+ F G+V+ N
Sbjct: 161 TVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYN 220
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L+ +MI+ G PD +TY ++ LCK D A V ++M G + T LIH
Sbjct: 221 LFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYL 280
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ K+ E E+M RGL P T+ L + K G
Sbjct: 281 SIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNG 318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ C GR A + F + S PT YN LL+G+ + + DA + EM +
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLS--PTEVTYNTLLHGYCSASRIDDAYCLFREMLR 577
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ VTP VVTY T++ G + +R A L M G + + YN +++GL ++ +E
Sbjct: 578 KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDE 637
Query: 198 VSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
M + +C G + +T+T ++ K G E A + + + G +P+ TY
Sbjct: 638 AFKMFQS--LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLV 695
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ G +E+ +L+ M ++G P+ + L++ L + A ++ R
Sbjct: 696 AENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 755
Query: 316 DIDLDTSTMLIHLL 329
++ T+++L+ +
Sbjct: 756 SVEASTTSLLMSIF 769
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 8/228 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ L+ Y A ++ A F +M+ K G + +L L + R A E
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFR-----EMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ ++ + YNI+LNG +S V +A + + + + + N++T+ ++
Sbjct: 606 LY--LNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 663
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+ R + A+ L + G+ PN + Y V + L+E G EE + P
Sbjct: 664 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 723
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+LV+ GD+ A L + R F +T + F+
Sbjct: 724 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTS 771
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 177/359 (49%), Gaps = 25/359 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K K + A+ L + + PD V T+ LI + G ++ A+ F
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVV---TYSSLISGFCVVGKLKYAVDLF---- 256
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF----HKRKELDQSWAPTVRVYNILL 116
N + N + F IL+D CK+G+V+ A K +LD V YN L+
Sbjct: 257 NRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLD------VVTYNSLM 310
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ K V A+ + M + VTP+V +Y ++ G+C+++ VD A++L +EM + I
Sbjct: 311 DGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIF 370
Query: 177 PNAIVYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
PN + YN+++DGL ++GR E V M +R +P ++TY S++ CK ++
Sbjct: 371 PNVVTYNSLVDGLCKSGRTSCALELVDEMHDR---GQPS-NIITYNSILDAICKNNHVDK 426
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A +L + +G P TY K G+++DA ++ ++ GY+P+ TY L+
Sbjct: 427 AIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLIN 486
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
C + D + + +MK GC + T +LIH L + D+A +MI RGL+
Sbjct: 487 GFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C G++K A + F++ + + P V ++IL++G+ + V++A+
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRM--ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+NV +VVTY +L++GYC +++V++A L M + G+ P+ Y+ +I+G +
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P +VTY SLV G CK+G A +++ M RG + TYN
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K V+ A+ L K+ E G PD TY +L+ LCK +LD A +V +++ +G
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T T LI+ C FDE A M G +P+ +T++ L ++ A+
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAE 533
Query: 375 KL 376
KL
Sbjct: 534 KL 535
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 170/363 (46%), Gaps = 9/363 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KAK++ +A L PDF++ + +L+ +++ G ++ + F +
Sbjct: 68 LLKAKQYQTALSLSQQMEFNGIKPDFITCN---LLMNCFSQLGHIKFSFSVFAKI----L 120
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
K + A F IL+ LC +G V A YFH K + Q + Y L+NG R
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKAL-YFHD-KVVAQGFQLDQVSYGTLINGLCRVGE 178
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
K A + + + V PNVV Y T+++ C+ + V+ A L EM + I P+ + Y++
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G G+ + + R + P + T++ L+ G+CK G + A +L +M+ +
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
TYN + +V A +L+ M + G TPD +Y I++ CK +D A+
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAM 358
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ +EM C+ ++ T L+ LC+ + A ++M RG + +T+ + D
Sbjct: 359 KLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAI 418
Query: 365 KKR 367
K
Sbjct: 419 CKN 421
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 161/327 (49%), Gaps = 8/327 (2%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
+L++ + G +K + F K L + + P + IL+ G V A F ++
Sbjct: 97 NLLMNCFSQLGHIKFSFSVF--AKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKV 154
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ + V+YGTL+ G CR+ A++L++ + + + PN ++Y+T+ID + +
Sbjct: 155 VAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLV 214
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + + P +VTY+SL+ G+C G L+ A + MIS P+ T++
Sbjct: 215 NDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSIL 274
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K GKV +A N+ M++ D +TY+ L+ C +++ A + M RG
Sbjct: 275 IDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGV 334
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D+ + +++I+ C++ DEA FE+M + + P+ +T+ L D K G T+ A +
Sbjct: 335 TPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALE 394
Query: 376 LCNVM------SSVPRSMELLDSRCKD 396
L + M S++ +LD+ CK+
Sbjct: 395 LVDEMHDRGQPSNIITYNSILDAICKN 421
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K N P + +G ++ + ++ A+ L ++M GI+P+ I N +++ + G
Sbjct: 49 LHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + L P VT+T L+KG C G++ A ++++GF +Y
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G+ + A+ L R++ P+ + Y ++ +CK+ ++ A + EM +
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + LI C + K A F MI + P+ TF L D F K G A+
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288
Query: 375 KLCNVM 380
+ VM
Sbjct: 289 NVLAVM 294
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 162/334 (48%), Gaps = 14/334 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAI-WTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD ++ + ++ Y AG V+AA W E A D A + L+ LC +G
Sbjct: 126 PDVMA---YNAMMAGYCGAGQVDAARRWCAERAVERD--------AYTCDTLIRGLCGRG 174
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A + L + P V Y ILL + K A + EMR + TP++VT
Sbjct: 175 RTANALAVLDEM--LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 232
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +V G C+ RVD AI +K + G EPN + YN V+ GL A R+E+ +M
Sbjct: 233 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 292
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VT+ L+ C+ G +E A ++L+ + G P+ +YN F K K++
Sbjct: 293 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMD 352
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM M+ G PD ++Y+ LL LC+ ++D+A+++ ++K +GC L + +I
Sbjct: 353 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 412
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
L + K EA +M+ +GL P +T+ +
Sbjct: 413 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 446
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 176/365 (48%), Gaps = 13/365 (3%)
Query: 27 VPDFVSKDTFVILIRRYA-RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
VPD V T+ IL+ R+G +A E + K + ++++ +C++
Sbjct: 192 VPDVV---TYTILLEATCKRSGYKQAMKLLDEMRD-----KGCTPDIVTYNVVVNGICQE 243
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GRV A E+ P YNI+L G ++ +DAE EM ++ PNVV
Sbjct: 244 GRVDDAIEFLKNLPS--YGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ L+ CR V+ A+ +++++ K G PN++ YN ++ + + ++ ++
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +V+Y +L+ C++G+++ A ++L + +G P +YN +K GK
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++A+ L +M+ G PD +TY + LC+ED+++ AI+ +++ G + +
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
I LC+ + A F MI G +P+ T+ L + G+ A+ L + + S R
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS--R 539
Query: 386 SMELL 390
E+L
Sbjct: 540 GEEIL 544
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 7/255 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+ LC++G V+ A E + + S P YN LL+ + + K + A F
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCS--PNSLSYNPLLHAFCKQKKMDKAMAFLDL 360
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P++V+Y TL+ CR VD A+ L+ +++ +G P I YNTVIDGL +AG+
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ + P ++TY+++ G C+ +E A + + G P+ YN
Sbjct: 421 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 480
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + A++L+ MI +G P+ TY IL++ L E + A + E+ RG
Sbjct: 481 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Query: 315 CDIDLDTSTMLIHLL 329
+I LD +HL+
Sbjct: 541 EEILLD-----VHLI 550
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 140/290 (48%), Gaps = 4/290 (1%)
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A+ R+ L + P V YN ++ G+ + V DA R W R V + T
Sbjct: 107 KLSASGRTAEARRVL-AACGPDVMAYNAMMAGYCGAGQV-DAARRWCAERA--VERDAYT 162
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
TL+ G C R A+ ++ EM + P+ + Y +++ + +++ +++
Sbjct: 163 CDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 222
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +V G C+ G ++ A + LK + S G P+ +YN + + E
Sbjct: 223 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 282
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
DA L +M + G P+ +T+++L+ LC++ ++ A++V +++ GC + + L+
Sbjct: 283 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLL 342
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
H C+ K D+A A + M+ RG P +++ L + G +A +L
Sbjct: 343 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 44/262 (16%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R +D A+RLV R+ P+A +I L +GR E R ++ GP ++
Sbjct: 79 RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEA-----RRVLAACGPDVM 129
Query: 216 TYTSLVKGYCKAGDLEGASK--------------------------------ILKMMISR 243
Y +++ GYC AG ++ A + +L M+ R
Sbjct: 130 AYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRR 189
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+P TY K + AM L +M + G TPD +TY++++ +C+E ++D A
Sbjct: 190 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 249
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
I+ K + GC+ + + +++ LC ++++A +M ++G P+ +TF L
Sbjct: 250 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 309
Query: 364 FKKRGMTALAQKLCNVMSSVPR 385
++G+ A + V+ +P+
Sbjct: 310 LCRKGLVEPALE---VLEQIPK 328
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 155/326 (47%), Gaps = 8/326 (2%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F + TF L+ +AG V+ AI + + + +D + ++ LCK G VK
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVM----LQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E + + + +P YN L++ + V++A + + + P+V T+ +
Sbjct: 348 EAVEVLDQM--ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++G C R A+ L +EMR +G EP+ YN +ID L G+ +E M+++ +
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
+++TY +L+ G+CKA A +I M G + TYN K +VEDA
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +MI G PD+ TY+ LL C+ + A + + M GC+ D+ T LI L
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 330 CRMYKFDEASAEFEDMIRRG--LVPH 353
C+ + + AS + +G L PH
Sbjct: 586 CKAGRVEVASKLLRSIQMKGINLTPH 611
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 10/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK L +A + A +L D VPD + TF +++ Y G ++ A+ E
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPD---EKTFTTVMQGYIEEGDLDGALRIRE--- 248
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV+ S +++ +++ CK+GRV+ A + + D + P +N L+NG
Sbjct: 249 --QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD-GFFPDQYTFNTLVNGL 305
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ +VK A M +E P+V TY +++ G C+L V A+ ++ +M PN
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+I L + + EE + + P + T+ SL++G C + A ++ +
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S+G P TYN GK+++A+N+ ++M SG +TY+ L+ CK +K
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A ++ EM+ G + T LI LC+ + ++A+ + MI G P T+
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
L F + G A + M+S
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTS 568
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 163/330 (49%), Gaps = 9/330 (2%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S F +L+ +LC+ +++ A P + + ++ G+ ++ A R
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVE 191
+M + + + V+ +V G+C+ RV+ A+ ++EM ++G P+ +NT+++GL +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
AG + +M+ L P + TY S++ G CK G+++ A ++L MI+R P+ T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN K +VE+A L R + G PD T++ L++ LC +A+++ +EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+GC+ D T MLI LC K DEA + M G +T+ L D F K T
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 372 LAQKLCNVMS--SVPRSM----ELLDSRCK 395
A+++ + M V R+ L+D CK
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ +LCK+ +V+ A+E R + P V +N L+ G ++N + A + E
Sbjct: 368 YNTLISTLCKENQVEEATEL--ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P+ TY L++ C ++D A+ ++K+M G + I YNT+IDG +A +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + V VTY +L+ G CK+ +E A++++ MI G P TYN
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+F + G ++ A ++ + M +G PD +TY L+ LCK ++++A ++ + ++ +G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
++ +I L R K EA F +M+ + P
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 156/346 (45%), Gaps = 19/346 (5%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+++ + + G VE A+ + +N D F F L++ LCK G VK A E
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQD---GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
L + + P V YN +++G + VK+A +M + +PN VTY TL+ C+
Sbjct: 321 M--LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL-------VEAGRFEEVSGMMERFLVCEP 210
+V+ A L + + +GI P+ +N++I GL V FEE+ R CEP
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-----RSKGCEP 433
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
TY L+ C G L+ A +LK M G S TYN F K K +A
Sbjct: 434 DE--FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ +M G + + +TY+ L+ LCK +++ A Q+ +M G D T L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
R +A+ + M G P +T+ L K G +A KL
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 148/342 (43%), Gaps = 38/342 (11%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LLDSL Q AA F+ + +++P +Y +L RS + D ++ +M+
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFE 196
T+ L+E Y + D + +V M E G++P+ YN +++ LV+ +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKA----------------------------- 227
V + V P + T+ L+K C+A
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 228 ------GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGY 280
GDL+GA +I + M+ G S + N F K G+VEDA+N ++M + G+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD+ T++ L+ LCK + AI++ M G D D+ T +I LC++ + EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ MI R P+ +T+ L K A +L V++S
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 182/366 (49%), Gaps = 15/366 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPD-FVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L+KA + A + +D +G PD FV + LI+ ++G E A ++ A
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV----YTALIKGLCKSGKPEEAYALYKEA 173
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + L+D LCK GR+ A + F + +++ + P Y +++G
Sbjct: 174 NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDD-EAVERGFIPDAVTYTSIIDGL 232
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V++ + EMR P+ VTY L++G+ + + + +A R+ ++M + G +
Sbjct: 233 CKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 292
Query: 180 IVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+ YN ++DGL +AGR E M ER V T+VTY++L+ G+C G++ A +
Sbjct: 293 VTYNIILDGLCKAGRVAEAYATFLAMEERGCV----ATVVTYSALMDGFCSEGNVSAAVE 348
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ + M+ RG P+ +YN R + GK+ A + K+++ PD T++ L LC
Sbjct: 349 LFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC 408
Query: 296 KE-DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+ D + +++ + M +G +L + ++L+ +CR + A F +M+ RG+ P
Sbjct: 409 QRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDV 468
Query: 355 LTFKRL 360
+ F L
Sbjct: 469 VVFNTL 474
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 171/373 (45%), Gaps = 23/373 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ F ++I R ++ A E A ++ + + + +D LCK R
Sbjct: 5 PDMVA---FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVT----YNVFIDGLCKAER 57
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + K E + PT Y L++G ++ + +A +M ++ +P + TY
Sbjct: 58 VDDAFQLLKKMDE--KKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTY 115
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME---- 203
+++G + RV+ A R+ +M G P+A VY +I GL ++G+ EE + +
Sbjct: 116 TVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANA 175
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKF 262
R P +VTYTSL+ G CKAG + A ++ + RGF+P TY K
Sbjct: 176 RKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKL 235
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+VE+ + +M GY PD +TY L+ K + A +V ++M G + T
Sbjct: 236 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 295
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+++ LC+ + EA A F M RG V +T+ L D F G NV ++
Sbjct: 296 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG---------NVSAA 346
Query: 383 VPRSMELLDSRCK 395
V +LD C+
Sbjct: 347 VELFRRMLDRGCE 359
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 150/302 (49%), Gaps = 13/302 (4%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+P + + +++NG R K + +A + P+ VTY ++G C+ RVD A +
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+K+M ++ P + Y ++DGL++AGR +E ++E+ + PT+ TYT ++ G
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR----KMIESGYT 281
KAG +E A +I M+ G P Y + K GK E+A LY+ + +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 282 PDRLTYHILLKILCKEDKLDLAIQV-SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD +TY L+ LCK ++ A QV E RG D T T +I LC++ + +E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL-------CNVMSSVPRSMELLDSR 393
F +M RG P +T+ L D F K M A ++ V+S+V ++ +LD
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI-ILDGL 302
Query: 394 CK 395
CK
Sbjct: 303 CK 304
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 13/387 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA D A +L + P T+ ++I ++AG VE A F
Sbjct: 83 LVDGLLKAGRLDEAMAVLEQMVEKGNSPTL---KTYTVVIDGLSKAGRVEEARRIF---- 135
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKR--KELDQSWAPTVRVYNILLN 117
+DM+ N A ++ L+ LCK G+ + A + + ++ + P V Y L++
Sbjct: 136 -VDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194
Query: 118 GWFRSKNVKDAER-FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G ++ + +A + F E + P+ VTY ++++G C+L RV+ EMR G E
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+A+ Y +IDG ++A + + + L + VTY ++ G CKAG + A
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M RG + + TY+ F G V A+ L+R+M++ G P+ ++Y+I+++ LC+
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC-RMYKFDEASAEFEDMIRRGLVPHYL 355
KL A +++ R D+ T +H LC R+ + FE M+ +G P+
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLH 434
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSS 382
++ L D + G +A ++ M S
Sbjct: 435 SYSILMDGICRAGGLEVALEIFREMVS 461
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 168/388 (43%), Gaps = 80/388 (20%)
Query: 1 MIKVLAKAKEFDSAWCLLLD----KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF 56
+IK L K+ + + A+ L + K VPD V T+ LI +AG + A F
Sbjct: 153 LIKGLCKSGKPEEAYALYKEANARKHHATAVPDVV---TYTSLIDGLCKAGRILEARQVF 209
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK------------------- 97
++ + + F A + ++D LCK GRV+ E FH+
Sbjct: 210 ---DDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 266
Query: 98 --------------RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
R+ L + YNI+L+G ++ V +A +L M +
Sbjct: 267 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 326
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------FE 196
VVTY L++G+C V A+ L + M G EPN + YN +I GL AG+ FE
Sbjct: 327 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 386
Query: 197 EV----------------SGMMERFLVCEPG-------------PTMVTYTSLVKGYCKA 227
++ G+ +R G P + +Y+ L+ G C+A
Sbjct: 387 KLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRA 446
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G LE A +I + M+SRG P +N R+ G+V++A+ ++R++ E PD +Y
Sbjct: 447 GGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSY 505
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGC 315
LL L + ++++ A +S MK +GC
Sbjct: 506 WSLLDGLSRCERMEEARLLSFHMKLQGC 533
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 10/226 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ + G V AA+ F + N S + I++ LC+ G K A Y
Sbjct: 329 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS----YNIIIRGLCRAG--KLAKAY 382
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWF-RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F+ K L + P V +N L+G R V D + M + +PN+ +Y L++G
Sbjct: 383 FYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDG 442
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
CR ++ A+ + +EM G+ P+ +V+NT+I L AGR +E + R L P
Sbjct: 443 ICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF-RELERRSAPD 501
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+Y SL+ G + +E A + M +G +P Y+ R+
Sbjct: 502 AWSYWSLLDGLSRCERMEEARLLSFHMKLQGC--APRHYDLTVRFL 545
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 169/349 (48%), Gaps = 11/349 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ LI + G ++ A+ F + DM ++ L+ LCK GR +
Sbjct: 83 SYAALIEGFCETGRIDEAVELFGEMDQPDM--------HMYAALVKGLCKAGRGEEGLLM 134
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ KEL W P+ R Y +++ + K+AE EM ++ + P VVT ++ Y
Sbjct: 135 LRRMKEL--GWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 192
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R+ A+R+++ M+ G +PN YN ++ G G+ + ++ + VC P
Sbjct: 193 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDA 252
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L++G C G +E A ++L++M G + TYN K G+ + A +L+
Sbjct: 253 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 312
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G P+ +T++ L+ LCK K+D+A + ++M GC D T + I LC+M
Sbjct: 313 LETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 372
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK-RLNDEFKKRGMTALAQKLCNVMSS 382
E + +M+++ + P + + ++ K+R +A+ ++SS
Sbjct: 373 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 421
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 41/344 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ SLC++ + +A Y + W P +N L+ G+ R+ V A + +
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLM--VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDK 71
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +VV+Y L+EG+C R+D A+ L EM +P+ +Y ++ GL +AGR
Sbjct: 72 MPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGR 127
Query: 195 FEEVSGMMERF--LVCEP---------------------------------GPTMVTYTS 219
EE M+ R L P P +VT T+
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++ YCK G + A ++L++M RG P+ TYN + F GKV AM L KM G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD +TY++L++ C + ++ A ++ + M+ G D T LI+ LC+ + D+A
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ F+ + RG+ P+ +TF L + K G +A K M S
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSA 351
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 2/306 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++++ CK+GR+ A K + P V YN L+ G+ V A +MR
Sbjct: 188 VINAYCKEGRMSDALRVLELMKL--RGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
V P+ VTY L+ G C ++ A RL++ M +G+ + YN +I+ L + GR ++
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 305
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + P VT+ SL+ G CK+G ++ A K L+ M+S G P TY+ F
Sbjct: 306 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K ++ ++ +M++ P + Y I++ L KE L + EM GC+
Sbjct: 366 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 425
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ T T + C + +EA +M + G+ + + L D G T A +
Sbjct: 426 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485
Query: 378 NVMSSV 383
M+SV
Sbjct: 486 KQMTSV 491
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 159/401 (39%), Gaps = 61/401 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LIR G +E+A ++ + + L+++LCK GR
Sbjct: 250 PDAV---TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD----QYTYNALINALCKDGR 302
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A F + + P +N L+NG +S V A +F +M TP+ TY
Sbjct: 303 TDQACSLFDSLET--RGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTY 360
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+ +E C+++ + + EM ++ ++P+ + Y VI L++ + V+ +
Sbjct: 361 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 420
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTYT+ ++ YC G L A +L M G YN + G+ +
Sbjct: 421 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 480
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCK----EDKLDL--------------------- 302
A+++ ++M P++ TY ILL+ L + ED L L
Sbjct: 481 AVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 540
Query: 303 ---------------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
A + MK ++ D T L+ C+ ++
Sbjct: 541 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 600
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+A MI+ G +PH ++++ L G T A+++
Sbjct: 601 LDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
YN ++ R ++ A R+ M + P+ T+ +L+ GYCR +VD A L +M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVS---GMMERFLVCEPGPTMVTYTSLVKGYCKA 227
G + + Y +I+G E GR +E G M++ P M Y +LVKG CKA
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ-------PDMHMYAALVKGLCKA 125
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G E +L+ M G+ PS Y + K ++A + ++M E G P +T
Sbjct: 126 GRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTC 185
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
++ CKE ++ A++V + MK RGC ++ T L+ C K +A A M
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245
Query: 348 RGLVPHYLTFKRL 360
G+ P +T+ L
Sbjct: 246 CGVNPDAVTYNLL 258
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/368 (19%), Positives = 139/368 (37%), Gaps = 64/368 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+ + D AW L + PD + +F+ + + G E + E
Sbjct: 328 LINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK--GSQEGLSFIGEM-- 383
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K+ + I++ L K+ + + + + P V Y + +
Sbjct: 384 ---LQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM--VSSGCNPDVVTYTTSMRAYC 438
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM---------- 170
+ +AE +EM K VT + + Y TL++G+ + + D A+ ++K+M
Sbjct: 439 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 498
Query: 171 ------------------------------------------RKEGIEPNAIVYNTVIDG 188
+K PN+ Y+++++G
Sbjct: 499 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 558
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
E GR EE + ++ YT+LV +CK+ A ++ MI GF+P
Sbjct: 559 FSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPH 618
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA---IQ 305
+Y + G+ + A ++ Y+PD + + +++ L K+ D++ I
Sbjct: 619 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 678
Query: 306 VSKEMKCR 313
+ + M CR
Sbjct: 679 MLERMNCR 686
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY ++++ C+ DL A + L +M+ G+ P T+N + + +V+ A +L+ KM
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G+ D ++Y L++ C+ ++D A+++ EM D+ L+ LC+ +
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLND 362
+E M G P + + D
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVD 155
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 66/146 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P Y+ +L G+ ++A M++++++ N Y LV +C+ +R A L
Sbjct: 547 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 606
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
V M + G P+ + Y ++ GL+ G+ ++ + + P + + ++ G K
Sbjct: 607 VCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 666
Query: 227 AGDLEGASKILKMMISRGFLPSPTTY 252
G + + +++ M+ PS TY
Sbjct: 667 KGHSDISREMIIMLERMNCRPSHQTY 692
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 155/302 (51%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL LC + + + A+E H E + P V Y +++G+F+ +V A + +
Sbjct: 218 YTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCK 277
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVT ++++G C+++ +D+A ++++M E I PN YN++I G + +G+
Sbjct: 278 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 337
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ E +++ P +VTY+ L+ CK+G A +I MI G P+ +TY
Sbjct: 338 WTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGS 397
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + D N+ M+++G P R ++I + CK +LD A +M+ +G
Sbjct: 398 LLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQG 457
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T +I LC++ + D+A + F MI GL P +TF L F G A+
Sbjct: 458 FMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAE 517
Query: 375 KL 376
+L
Sbjct: 518 EL 519
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++D LCK + A + +D+ P YN L++G+ S +A R EM +
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQM--IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSR 350
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ PNVVTY L++ C+ A + M + G +PNA Y +++ G G +
Sbjct: 351 DGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVD 410
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++ + + + P + + YCK G L+ AS M +GF+P Y
Sbjct: 411 MNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVID 470
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G+++DAM+ + +MI+ G +PD +T++ L+ K + A ++ EM RG
Sbjct: 471 GLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPP 530
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++T +I L + K EA F+ M R G P+ +++ +
Sbjct: 531 NVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTM 573
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 38/296 (12%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLE-MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
+ LL K DA L M + TP+V +Y TL++G C ++ + A L+
Sbjct: 181 TFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHM 240
Query: 170 MRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
M ++G PN + Y TVI G + G + + + L P +VT S++ G CK
Sbjct: 241 MAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 300
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
++ A +L+ MI +P+ TTYN + G+ +A+ + ++M G P+ +TY
Sbjct: 301 QAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTY 360
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH-------------------- 327
+L+ LCK A ++ M G + T L+H
Sbjct: 361 SMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQ 420
Query: 328 ---------------LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ + DEAS F M ++G +P + + + D K G
Sbjct: 421 NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIG 476
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 171/426 (40%), Gaps = 68/426 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A +L I H +P+ T+ LI Y +G A+ + +
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCT---TYNSLIHGYLSSGQWTEAVRILKEMS 349
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + +L+D LCK G A E F+ + Q P Y LL+G+
Sbjct: 350 RDGQRPNVVT----YSMLIDCLCKSGLHAEAREIFNSMIQSGQK--PNASTYGSLLHGYA 403
Query: 121 RS------KNVKD-----------------------------AERFWLEMRKENVTPNVV 145
NVKD A + +M+++ P++V
Sbjct: 404 TEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIV 463
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y T+++G C++ R+D A+ +M +G+ P+ I +NT+I G G++E+ +
Sbjct: 464 AYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM 523
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P + T+ S++ K G + A K+ +M G P+ +YN + G+V
Sbjct: 524 MDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 583
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ M L M+ G P +T++ LL M G D+ T L
Sbjct: 584 GEVMKLLDDMLLIGLKPTAVTFNTLL----------------DGMVSMGLKPDVVTCKTL 627
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
I C + ++ F +M+ + +T + K RG+T A C SSV
Sbjct: 628 IDSCCEDGRIEDILTLFREMLGKADKTDTIT-----ENIKLRGVTVKASYHC---SSVVI 679
Query: 386 SMELLD 391
S++ L+
Sbjct: 680 SLKALE 685
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 16/296 (5%)
Query: 100 ELDQSWAP-TVRVYNILLNGWFR---SKNVKDAERFWLEM-------RKENVTPNVVTYG 148
EL Q P ++ N LL R S +V+D + M + V P++ T+G
Sbjct: 89 ELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFG 148
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ C ++ + ++ K G+ A+ + ++ L R + ++ R +
Sbjct: 149 ILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMP- 207
Query: 209 EPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYNYFFRYFSKFGK 264
E G P + +YT+L+KG C E A++++ MM G P+ +Y F K G
Sbjct: 208 ELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGD 267
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V A L+ KM++ G P+ +T + ++ LCK +D A V ++M + T
Sbjct: 268 VGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNS 327
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LIH ++ EA ++M R G P+ +T+ L D K G+ A A+++ N M
Sbjct: 328 LIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSM 383
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 5/333 (1%)
Query: 51 AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR 110
IW F + LD F +F IL++ CK+G + A + F + + +S PTV
Sbjct: 222 GTIWGF-YMEILD--AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK--RSLQPTVV 276
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + N+ + R +M K P+V TY L+ C+ ++D A L EM
Sbjct: 277 SFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
K G+ PN +++ T+I G G + + ++ L P +V Y +LV G+CK GDL
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A I+ MI RG P TY F + G VE A+ + ++M ++G DR+ + L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ +CKE ++ A + +EM G D T TM++ C+ ++M G
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
VP +T+ L + K G A L + M ++
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F L+ + G + E + +K L + P + +YN L+NG+ ++ ++ A
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESY--QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + + P+ +TY TL++G+CR V+ A+ + KEM + GIE + + ++ ++ G+ + G
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + + L P VTYT ++ +CK GD + K+LK M S G +PS TYN
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K G++++A L M+ G PD +TY+ LL+
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWL 133
+ L+D C+ G V+ A E RKE+DQ+ RV ++ L+ G + V DAER
Sbjct: 418 YTTLIDGFCRGGDVETALEI---RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + P+ VTY +++ +C+ +L+KEM+ +G P+ + YN +++GL + G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
+ + +++ L P +TY +L++G+ + +
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ DA + + RK + G L++ +L E+ G N V+N
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+++ + G + + + PT+V++ +L+ GYCK G+L+ ++ M
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TY+ K K++ A L+ +M + G P+ + + L+ + ++DL
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ ++M +G D+ L++ C+ A + MIRRGL P +T+ L D F
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 365 KKRG 368
+ G
Sbjct: 426 CRGG 429
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ +++D+ CK+G + F KE+ P+V YN+LLNG + +K+A+
Sbjct: 488 YTMMMDAFCKKGDAQTG---FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M V P+ +TY TL+EG+ R + + R +++ + GI + Y ++++ L A
Sbjct: 545 AMLNIGVVPDDITYNTLLEGH--HRHANSSKRYIQK-PEIGIVADLASYKSIVNELDRAS 601
Query: 194 R 194
+
Sbjct: 602 K 602
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 163/324 (50%), Gaps = 6/324 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G ++ A+ + D N + L+ +LCK+ V+AA+E
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPN----TVTYNTLIGTLCKENHVEAATEL 394
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P V +N L+ G + N + A + EM+++ P+ TY L+E
Sbjct: 395 --ARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C RR+ A+ L+KEM G N +VYNT+IDGL + R + + ++ + +
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ G CK+ +E A++++ MI G P TY +YF + G ++ A ++ +
Sbjct: 513 VTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQN 572
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M +G PD +TY L+ LCK ++D+A ++ + ++ +G + +I LC+ +
Sbjct: 573 MTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK 358
EA F +M+ +G P +T+K
Sbjct: 633 TKEAMRLFREMMEKGDPPDVITYK 656
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 172/365 (47%), Gaps = 10/365 (2%)
Query: 18 LLDKIGGHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF 75
L++ + V D V D TF ILIR +A + AI E N + + + F
Sbjct: 182 LVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKT----F 237
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
L+ ++ V+ A K ++ T N+L+NG + +++A RF E
Sbjct: 238 TTLMQGFIEEADVEGALRI--KELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE- 294
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+E P+ VT+ LV G CR + + + ++ M ++G E + YN++I GL + G
Sbjct: 295 -EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E ++ + + P VTY +L+ CK +E A+++ +++ S+G LP T+N
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ E AM L+ +M E G PD TY IL++ LC E +L A+ + KEM+ GC
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ LI LC+ + +A F+ M G+ +T+ L + K A +
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533
Query: 376 LCNVM 380
L + M
Sbjct: 534 LMDQM 538
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 186/386 (48%), Gaps = 36/386 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K ++A L +PD TF LI+ E A+ FE
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVC---TFNSLIQGLCLTSNREIAMELFEEMK 434
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGW 119
K D + IL++SLC + R+K A KE++ S A V VYN L++G
Sbjct: 435 E----KGCDPDEFTYSILIESLCSERRLKEALMLL---KEMELSGCARNVVVYNTLIDGL 487
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ V DAE + +M V+ + VTY TL+ G C+ +RV+ A +L+ +M EG++P+
Sbjct: 488 CKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDK 547
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y T++ + G + + +++ + P +VTY +L+ G CKAG ++ ASK+L+
Sbjct: 548 FTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRS 607
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK-ED 298
+ +G + +P YN + K + ++AM L+R+M+E G PD +TY I+ + LC
Sbjct: 608 VQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGG 667
Query: 299 KLDLAIQVSKEMKCRG---------------CDIDL-DTSTMLIHLLCRMYKFDEASAEF 342
+ A+ + EM +G C + + DT LI+++ +F ++
Sbjct: 668 PIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQS---- 723
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRG 368
E I RG +L ++ ND G
Sbjct: 724 ETSIIRG----FLKIQKFNDALANLG 745
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 177/450 (39%), Gaps = 89/450 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L KA + A +L D PD + TF L++ + VE A+ E
Sbjct: 205 LIRALCKAHQLRPAILMLEDMPNYGLRPD---EKTFTTLMQGFIEEADVEGALRIKEL-- 259
Query: 61 NLDMVKNFDSGASL----FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
MV +SG L +L++ LCK+GR++ A + ++ ++ + P +N L+
Sbjct: 260 ---MV---ESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE----EEGFCPDQVTFNALV 309
Query: 117 NGWFRSKNVKDAER---FWLE--------------------------------MRKENVT 141
NG R+ ++K F LE M +
Sbjct: 310 NGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCE 369
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVK--------------------------------- 168
PN VTY TL+ C+ V+ A L +
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429
Query: 169 --EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM+++G +P+ Y+ +I+ L R +E +++ + +V Y +L+ G CK
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A I M G S TYN K +VE+A L +MI G PD+ T
Sbjct: 490 NNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y +LK C++ + A + + M GC+ D+ T LI LC+ + D AS +
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+G+V + + KR T A +L
Sbjct: 610 MKGMVLTPQAYNPVIQALCKRKRTKEAMRL 639
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 158/361 (43%), Gaps = 52/361 (14%)
Query: 28 PDFVSKDT-FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG-----ASLFEILLDS 81
P++ + + F L+R+ ARAG F + L +++ S S F I L++
Sbjct: 86 PNYSAHPSVFHELLRQLARAG---------SFDSMLTLLRQMHSSKIPVDESTFLIFLET 136
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
+ A E D + P R YN+ L+ ++ +K E +M + V
Sbjct: 137 YATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVP 196
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+V T+ L+ C+ ++ AI ++++M G+ P+
Sbjct: 197 PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDE---------------------- 234
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
T+T+L++G+ + D+EGA +I ++M+ G + + N K
Sbjct: 235 -------------KTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G++E+A+ + E G+ PD++T++ L+ LC+ + +++ M +G ++D+ T
Sbjct: 282 EGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYT 339
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
LI LC++ + DEA M+ R P+ +T+ L K A +L V++
Sbjct: 340 YNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLT 399
Query: 382 S 382
S
Sbjct: 400 S 400
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 184/362 (50%), Gaps = 14/362 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
I VL +A+ F W L+ H + PD V+ T ++++ R A+ V + +F
Sbjct: 114 IYVLGRARRFTHMWDLVHSY---HRLCPDAVTARTAMVVLGRVAKICSVRETVASFRRLL 170
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + A LF LL +LC++ + A FH K + + +NILL+GW
Sbjct: 171 RLFRGREGTESADLFNALLRTLCQEKSMSDARNVFHAHK---YEFQVNRQTFNILLSGW- 226
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K +DAE F+ EMR+ + P++VTY +L++ C+ R V++A +L+ EMR++ I P+ I
Sbjct: 227 --KTSEDAEAFFAEMRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVI 284
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
Y ++I GL G+ ++ +++ +CE G P + Y + ++ + A L A ++
Sbjct: 285 TYTSLIGGLGLIGQPDKARHLLKE--MCELGCHPDVPAYNATIRNFVIAKRLGDAFALMD 342
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M S+G +P+ TTYN FFR++ + A LY +M P+ + ++++ +
Sbjct: 343 EMASKGLMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFIVRLCHRHG 402
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K+ A+++ +M G S +L LLC K +EA F M+ G P + F+
Sbjct: 403 KVMQALELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVELGQKPSSVAFR 462
Query: 359 RL 360
R+
Sbjct: 463 RI 464
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 171/336 (50%), Gaps = 7/336 (2%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
+T+ +L+R + G+ ++A F+ + ++ + +S+ E+L+ S + G++ +A
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPD----SSILELLVSSYARMGKLDSAKN 165
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ ++ +P V YN LLN + V +A + E + P+V ++ L+ G
Sbjct: 166 FLNEVHCYGIKVSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM-ERFLVCEPGP 212
CR+ +D+A + M G P+ + YNT+I+G + ++ E L+ P
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSP 283
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TYTS++ GYCK GD++ AS++ M+S G P+ T+N F K G + AM +Y
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
KM+ G PD +T+ L+ C+E +++ +++ +EMK R ++ T +LI+ LC+
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ EA + +VP + + D F K G
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAG 439
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 171/378 (45%), Gaps = 12/378 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ A+ + DSA L + G +V FV + +L+++ +V+ A+ F
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQ----NLVDEAVLLFR-- 203
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ F F IL+ LC+ G + A E+F P + YN L+NG+
Sbjct: 204 --EHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNF--GCFPDIVSYNTLINGF 259
Query: 120 FRSKNVKDAERFWLE-MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R + E M + V+P+V+TY +++ GYC+L + A L EM GI+PN
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+N +IDG + G M E+ L+ P +VT+TSL+ GYC+ G++ K+ +
Sbjct: 320 DFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWE 379
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M R P+ TY K ++ +A N R + S P Y+ ++ CK
Sbjct: 380 EMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAG 439
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K+D A + EM+ + C D T T+LI C + EA + F MI VP +T
Sbjct: 440 KVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITIN 499
Query: 359 RLNDEFKKRGMTALAQKL 376
L K GM A ++
Sbjct: 500 SLISCLLKAGMPNEASQI 517
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 43/343 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L K D A L + + + VPD S F ILIR R G ++ A FEF
Sbjct: 185 LLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS---FNILIRGLCRIGEIDKA---FEFFQ 238
Query: 61 NLD-----------------------------------MVKNFDSGASLFEILLDSLCKQ 85
N+ ++K + ++ CK
Sbjct: 239 NMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKL 298
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G +KAASE F + + P +N+L++G+ + N++ A + +M P+VV
Sbjct: 299 GDMKAASELFDEM--VSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ +L++GYCR V++ ++L +EM+ + PN Y +I+ L + R E +
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E P Y ++ G+CKAG ++ A+ I+ M + P T+ G++
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
+A++ + KMIE PD +T + L+ L K + A Q+ +
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQ 519
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 11/251 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
PD + T+ +I Y + G ++AA F+ +MV + F +L+D K G
Sbjct: 283 PDVI---TYTSIISGYCKLGDMKAASELFD-----EMVSSGIKPNDFTFNVLIDGFGKVG 334
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+++A + K L P V + L++G+ R V + W EM+ N++PNV T
Sbjct: 335 NMRSAMVMYEKMLLL--GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ C+ R+ A ++ ++ + P +YN VIDG +AG+ +E + ++
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +T+T L+ G C G + A MI +P T N K G
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512
Query: 267 DAMNLYRKMIE 277
+A + + ++
Sbjct: 513 EASQIKQAALQ 523
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 133/296 (44%), Gaps = 7/296 (2%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
T Y++L+ + A+ + MR + + P+ LV Y R+ ++D A +
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL 167
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
E+ GI+ + VYN +++ LV+ +E + L P + ++ L++G C+
Sbjct: 168 NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRI 227
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK-MIESGYTPDRLT 286
G+++ A + + M + G P +YN F + ++ +L ++ M+ G +PD +T
Sbjct: 228 GEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ CK + A ++ EM G + T +LI ++ A +E M+
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
G +P +TF L D + + G KL N+ +V L+++ CK+
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 13 SAWCLLLDKIGGHEVPD-FVSKD------TFVILIRRYARAGMVEAAIWTFEFANNLDMV 65
S +C L D E+ D VS TF +LI + + G + +A+ +E L +
Sbjct: 293 SGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCL 352
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ + F L+D C++G V + + + K ++ +P V Y +L+N + +
Sbjct: 353 PDVVT----FTSLIDGYCREGEVNQGLKLWEEMKV--RNLSPNVYTYAVLINALCKENRI 406
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
++A F ++ V P Y +++G+C+ +VD A +V EM+++ P+ I + +
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTIL 466
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-----LKMM 240
I G GR E + + P +T SL+ KAG AS+I K+
Sbjct: 467 IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLN 526
Query: 241 ISRGFLPSPTT 251
+ L SP T
Sbjct: 527 LGLSSLGSPLT 537
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 181/360 (50%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +K +D L + + + +P+ V TF +LIR + R GMVE AI +
Sbjct: 253 LLKGLCASKRWDDVEELFAEMMEKNCMPNEV---TFDMLIRFFCRGGMVERAIQVLQQMT 309
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N +L I+++S+CKQGRV A ++ + P Y +L G
Sbjct: 310 EHECATN----TTLCNIVINSICKQGRVDDAFKFLNNMGSY--GCNPDTISYTTVLKGLC 363
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R++ DA+ EM + N PN VT+ T + C+ +++AI L+++M++ G +
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV 423
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +++G G + +E F P +TYT+L+ G C A L+ A++++ M
Sbjct: 424 TYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEM 480
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ R P+ T+N +F + G +++A+ L +M+E G TP+ +TY+ L + K+
Sbjct: 481 LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSS 540
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+++ + +G D+ T + +I +L + + +EA F G+ P L + ++
Sbjct: 541 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKI 600
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 173/368 (47%), Gaps = 12/368 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+VL A LL D + P+ V T+ +L+ + E A+ +
Sbjct: 148 LIRVLCDRGRVADALSLLDDMLRRGCQPNVV---TYTVLLEAMCKNSGFEQAMAVLDEMR 204
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + ++++ +C++GRV A + ++ P Y LL G
Sbjct: 205 AKGCTPNIVT----YNVIINGMCREGRVDDARDLLNRL--FSYGCQPDTVSYTTLLKGLC 258
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
SK D E + EM ++N PN VT+ L+ +CR V+RAI+++++M + N
Sbjct: 259 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTT 318
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ N VI+ + + GR ++ + P ++YT+++KG C+A A ++LK M
Sbjct: 319 LCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEM 378
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P+ T+N F + G +E A+ L +M E G T +TY+ L+ C + +
Sbjct: 379 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHI 438
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A+++ + M C+ I T T L+ LC + D A+ +M+ R P+ +TF L
Sbjct: 439 DSALELFRSMPCKPNTI---TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVL 495
Query: 361 NDEFKKRG 368
+ F ++G
Sbjct: 496 VNFFCQKG 503
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 140/284 (49%), Gaps = 5/284 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C+ G + AA +R AP Y L+ V DA +
Sbjct: 113 YNTLVAGYCRYGHLDAA-----RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDD 167
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY L+E C+ ++A+ ++ EMR +G PN + YN +I+G+ GR
Sbjct: 168 MLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 227
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ R P V+YT+L+KG C + + ++ M+ + +P+ T++
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 287
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R+F + G VE A+ + ++M E + +I++ +CK+ ++D A + M G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
C+ D + T ++ LCR ++++A ++M+R P+ +TF
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFN 391
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 169/384 (44%), Gaps = 19/384 (4%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA---IWTFEFANNLD 63
+ + D+A L + G V F + L+ Y R G ++AA I + A +
Sbjct: 88 RGRTSDAARVLRAAEGSGSPVDVF----AYNTLVAGYCRYGHLDAARRLIGSMPVAPD-- 141
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
A + L+ LC +GRV A L + P V Y +LL ++
Sbjct: 142 --------AYTYTPLIRVLCDRGRVADALSLLDDM--LRRGCQPNVVTYTVLLEAMCKNS 191
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ A EMR + TPN+VTY ++ G CR RVD A L+ + G +P+ + Y
Sbjct: 192 GFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYT 251
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T++ GL + R+++V + + P VT+ L++ +C+ G +E A ++L+ M
Sbjct: 252 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEH 311
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+ T N K G+V+DA M G PD ++Y +LK LC+ ++ + A
Sbjct: 312 ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDA 371
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ KEM C + T I +LC+ ++A E M G +T+ L +
Sbjct: 372 KELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNG 431
Query: 364 FKKRGMTALAQKLCNVMSSVPRSM 387
F +G A +L M P ++
Sbjct: 432 FCVQGHIDSALELFRSMPCKPNTI 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 155/357 (43%), Gaps = 16/357 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I + K D A+ L+ +G + PD +S T + G+ A W
Sbjct: 323 VINSICKQGRVDDAF-KFLNNMGSYGCNPDTISYTTVL--------KGLCRAERWNDAKE 373
Query: 60 NNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+MV+N F + LC++G ++ A + +E V YN L+NG
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQE--HGCTVGVVTYNALVNG 431
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++ A + R PN +TY TL+ G C R+D A LV EM PN
Sbjct: 432 FCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ +N +++ + G +E ++E+ + P ++TY +L G K E A ++L
Sbjct: 489 VVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
++S+G P T++ SK +VE+A+ ++ + G P L Y+ +L LCK
Sbjct: 549 GLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRH 608
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
++D AI M GC + T +LI L R EA + RG+V L
Sbjct: 609 EIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNL 665
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 119/277 (42%), Gaps = 3/277 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V + L+ R DA R +V Y TLV GYCR +D A R
Sbjct: 72 APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 131
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ M + P+A Y +I L + GR + +++ L P +VTYT L++ C
Sbjct: 132 LIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 188
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K E A +L M ++G P+ TYN + G+V+DA +L ++ G PD +
Sbjct: 189 KNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTV 248
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y LLK LC + D ++ EM + C + T MLI CR + A + M
Sbjct: 249 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM 308
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + + K+G A K N M S
Sbjct: 309 TEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
L ++ P+V L+ CR R A R+++ G + YNT++ G
Sbjct: 64 LSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRY 123
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G + ++ V P TYT L++ C G + A +L M+ RG P+ TY
Sbjct: 124 GHLDAARRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTY 180
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
K E AM + +M G TP+ +TY++++ +C+E ++D A + +
Sbjct: 181 TVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFS 240
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
GC D + T L+ LC ++D+ F +M+ + +P+ +TF L F + GM
Sbjct: 241 YGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 300
Query: 373 AQKLCNVMS 381
A ++ M+
Sbjct: 301 AIQVLQQMT 309
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 182/394 (46%), Gaps = 16/394 (4%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I + A+ ++F + W L+ P S TF I+ RYA G A+ F +
Sbjct: 99 IDICARLRDFRTLWFLVSRMRSCRLGP---SPRTFAIIAERYAAMGKPHRAVTVFMSMHE 155
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
++ S F +LD LCK RV+ A F K L + YNI++NGW
Sbjct: 156 YGCFQDLSS----FNTILDVLCKSKRVEMAYNLF---KALKGKFKADCVSYNIIVNGWCL 208
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
K A EM + +TPN+ TY ++ GY R + + A EM+K + + +
Sbjct: 209 IKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVT 268
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y +VI GL G + + + + P++ T+ +L++ CK +E A I + M+
Sbjct: 269 YTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMV 328
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
RG++P+ TYN R G+++ AM L +M + P+ TY+IL++ C +++
Sbjct: 329 KRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIE 388
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGLVPHYLTFK 358
+ + ++M C +LDT +LI+ + D A +M+ RG +P LTF
Sbjct: 389 KGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFN 448
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS---VPRSMEL 389
R+ D G A+++ ++ +PR +L
Sbjct: 449 RVLDGLLLTGNQDFAKEILSLQGGCGRLPRKFKL 482
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 84/216 (38%), Gaps = 34/216 (15%)
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A ++ ID F + ++ R C GP+ T+ + + Y G A +
Sbjct: 92 ASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFM 151
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY-------------------------- 272
M G +++N K +VE A NL+
Sbjct: 152 SMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKR 211
Query: 273 --------RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
++M+E G TP+ TY+I+L + + + A EMK R CDID+ T T
Sbjct: 212 TPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTS 271
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+IH L + + A F M++ G++P TF L
Sbjct: 272 VIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNAL 307
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 171/336 (50%), Gaps = 7/336 (2%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
+T+ +L+R + G+ ++A F+ + ++ + +S+ E+L+ S + G++ +A
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPD----SSILELLVSSYARMGKLDSAKN 165
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ ++ +P V YN LLN + V +A + E + P+V ++ L+ G
Sbjct: 166 FLNEVHCYGIKVSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM-ERFLVCEPGP 212
CR+ +D+A + M G P+ + YNT+I+G + ++ E L+ P
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSP 283
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TYTS++ GYCK GD++ AS++ M+S G P+ T+N F K G + AM +Y
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
KM+ G PD +T+ L+ C+E +++ +++ +EMK R ++ T +LI+ LC+
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ EA + +VP + + D F K G
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAG 439
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 171/378 (45%), Gaps = 12/378 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ A+ + DSA L + G +V FV + +L+++ +V+ A+ F
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQ----NLVDEAVLLFR-- 203
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ F F IL+ LC+ G + A E+F P + YN L+NG+
Sbjct: 204 --EHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNF--GCFPDIVSYNTLINGF 259
Query: 120 FRSKNVKDAERFWLE-MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R + E M + V+P+V+TY +++ GYC+L + A L EM GI+PN
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+N +IDG + G M E+ L+ P +VT+TSL+ GYC+ G++ K+ +
Sbjct: 320 DFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWE 379
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M R P+ TY K ++ +A N R + S P Y+ ++ CK
Sbjct: 380 EMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAG 439
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K+D A + EM+ + C D T T+LI C + EA + F MI VP +T
Sbjct: 440 KVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITIN 499
Query: 359 RLNDEFKKRGMTALAQKL 376
L K GM A ++
Sbjct: 500 SLISCLLKAGMPNEASQI 517
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 43/343 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L K D A L + + + VPD S F ILIR R G ++ A FEF
Sbjct: 185 LLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS---FNILIRGLCRIGEIDKA---FEFFQ 238
Query: 61 NLD-----------------------------------MVKNFDSGASLFEILLDSLCKQ 85
N+ ++K + ++ CK
Sbjct: 239 NMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKL 298
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G +KAASE F + + P +N+L++G+ + N++ A + +M P+VV
Sbjct: 299 GDMKAASELFDEM--VSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ +L++GYCR V++ ++L +EM+ + PN Y +I+ L + R E +
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E P Y ++ G+CKAG ++ A+ I+ M + P T+ G++
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
+A++ + KMIE PD +T + L+ L K + A Q+ +
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQ 519
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 11/251 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
PD + T+ +I Y + G ++AA F+ +MV + F +L+D K G
Sbjct: 283 PDVI---TYTSIISGYCKLGDMKAASELFD-----EMVSSGIKPNDFTFNVLIDGFGKVG 334
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+++A + K L P V + L++G+ R V + W EM+ N++PNV T
Sbjct: 335 NMRSAMVMYEKMLLL--GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ C+ R+ A ++ ++ + P +YN VIDG +AG+ +E + ++
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +T+T L+ G C G + A MI +P T N K G
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512
Query: 267 DAMNLYRKMIE 277
+A + + ++
Sbjct: 513 EASQIKQAALQ 523
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 133/296 (44%), Gaps = 7/296 (2%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
T Y++L+ + A+ + MR + + P+ LV Y R+ ++D A +
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL 167
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
E+ GI+ + VYN +++ LV+ +E + L P + ++ L++G C+
Sbjct: 168 NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRI 227
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK-MIESGYTPDRLT 286
G+++ A + + M + G P +YN F + ++ +L ++ M+ G +PD +T
Sbjct: 228 GEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ CK + A ++ EM G + T +LI ++ A +E M+
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
G +P +TF L D + + G KL N+ +V L+++ CK+
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 13 SAWCLLLDKIGGHEVPD-FVSKD------TFVILIRRYARAGMVEAAIWTFEFANNLDMV 65
S +C L D E+ D VS TF +LI + + G + +A+ +E L +
Sbjct: 293 SGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCL 352
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ + F L+D C++G V + + + K ++ +P V Y +L+N + +
Sbjct: 353 PDVVT----FTSLIDGYCREGEVNQGLKLWEEMKV--RNLSPNVYTYAVLINALCKENRI 406
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
++A F ++ V P Y +++G+C+ +VD A +V EM+++ P+ I + +
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTIL 466
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-----LKMM 240
I G GR E + + P +T SL+ KAG AS+I K+
Sbjct: 467 IIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLN 526
Query: 241 ISRGFLPSPTT 251
+ L SP T
Sbjct: 527 LGLSSLGSPLT 537
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 179/383 (46%), Gaps = 14/383 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K K+ D LL + H V+ +T +RR++ AG E A+ F+
Sbjct: 80 MVDILGKMKQMDQMRELLEEMNRNH----LVTLNTVGKAMRRFSGAGKWEDAVRMFDELG 135
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ KN +S +LLD+LCK+G+V+ A F EL P +NI ++GW
Sbjct: 136 TFGLEKNAES----MNLLLDTLCKEGKVEQARAIF---LELKSHILPNAHTFNIFIHGWC 188
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V +A EM+ P V++Y T++ YCR + L+ EM +G PN +
Sbjct: 189 KANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVV 248
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL-KM 239
Y T+I L ++ EE + +R P + SL+ +AG + A + K
Sbjct: 249 TYTTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKE 308
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-YTPDRLTYHILLKILCKED 298
M + G +TYN G V A++L R+M S + D T++ LLK +
Sbjct: 309 MPNAGVSRDTSTYNSMIAMLCHHGHVSKALSLLREMETSAPFKLDGQTFYPLLKSCLRTG 368
Query: 299 KLDLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++L Q+ +M K +D +LIH LCR K A FE+MI + +VP Y T
Sbjct: 369 DMNLLSQLLDDMVKKHQLSLDRSAYALLIHGLCRANKCQWAYHLFEEMISKDIVPKYQTC 428
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
L +E K + M A+K+ + M
Sbjct: 429 HMLLEEVKLKSMYDTAEKIEDFM 451
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 171/362 (47%), Gaps = 10/362 (2%)
Query: 8 AKEF-DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
A++F + A LLL+ VP V+ +T LI + G EAA F+ ++
Sbjct: 312 ARDFVEKAGALLLEMENEGIVPTVVTYNT---LIDGLFKTGNAEAAQVKFDEMRAKGLLP 368
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+ + + L++ CK G +K A F K PTV YNIL++G+ R +++
Sbjct: 369 DLIT----YNSLINGYCKAGNLKQALCLFGDLKR--AGLGPTVLTYNILIDGYCRLGDLE 422
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A R EM +E+ P+V TY L+ G C +R + EM +G+EP+ YNT I
Sbjct: 423 GARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRI 482
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ G + E ++ VTY L+ G CK G L+ A + M++ G
Sbjct: 483 SAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLR 542
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
TY + G++ +A N++ M+ SG +P +TY I + C+ L LA
Sbjct: 543 LDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGW 602
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++M G + + T +L+H LCRM + + A F +M+ RGLVP+ T+ L D K
Sbjct: 603 FRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCK 662
Query: 367 RG 368
G
Sbjct: 663 EG 664
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 178/376 (47%), Gaps = 14/376 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
++ KA D A LL ++ +P+ V T+ ++I AR G +E A
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDV---TYNVVINGLARKGELEKA------ 285
Query: 59 ANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
A +D+++ + + A + L+ L + V+ A + + ++ PTV YN L++
Sbjct: 286 AQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEME--NEGIVPTVVTYNTLID 343
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G F++ N + A+ + EMR + + P+++TY +L+ GYC+ + +A+ L ++++ G+ P
Sbjct: 344 GLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGP 403
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ YN +IDG G E + E + P + TYT L+ G C +L
Sbjct: 404 TVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFF 463
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+S+G P YN G + +A L +M+ G + D +TY++L+ LCK
Sbjct: 464 DEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKT 523
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + +M G +D T T LIH C + EA F+ M+ GL P +T+
Sbjct: 524 GSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTY 583
Query: 358 KRLNDEFKKRGMTALA 373
+ +RG LA
Sbjct: 584 TIFIHTYCRRGNLYLA 599
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 37/306 (12%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V+ N +L + D + +M + V P++ TY TL++ +C+ R+D+A+
Sbjct: 191 APFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVA 250
Query: 166 LVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFEE----------------------VSGM 201
L+K+M R G PN + YN VI+GL G E+ ++G+
Sbjct: 251 LLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGL 310
Query: 202 MERFLVCEPG------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ R V + G PT+VTY +L+ G K G+ E A M ++G LP
Sbjct: 311 LARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDL 370
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN + K G ++ A+ L+ + +G P LTY+IL+ C+ L+ A ++ +E
Sbjct: 371 ITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEE 430
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK-RLNDEFKKRG 368
M C D+ T T+L++ C + F++M+ +GL P + R++ E
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490
Query: 369 MTALAQ 374
+T Q
Sbjct: 491 ITNAFQ 496
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 142/336 (42%), Gaps = 48/336 (14%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCK 84
+PD + T+ LI Y +AG ++ A+ F +K G ++ + IL+D C+
Sbjct: 367 LPDLI---TYNSLINGYCKAGNLKQALCLF------GDLKRAGLGPTVLTYNILIDGYCR 417
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN- 143
G ++ A K + ++ P V Y IL+NG +N+ F+ EM + + P+
Sbjct: 418 LGDLEGARRL--KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDC 475
Query: 144 ----------------------------------VVTYGTLVEGYCRLRRVDRAIRLVKE 169
VTY L++G C+ + A L +
Sbjct: 476 FAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMK 535
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M +G+ + + Y +I E GR E + + + P++VTYT + YC+ G+
Sbjct: 536 MVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGN 595
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
L A + M+ G P+ TYN + G+ E A + +M+E G P++ TY +
Sbjct: 596 LYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTL 655
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
L+ CKE AI++ EM +G D T L
Sbjct: 656 LIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNAL 691
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 17/252 (6%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR------LVKEMRKEGIEPNAIVYNTVID 187
EM + V P V E C LR + A R + +M + G+EP+ YNT++D
Sbjct: 184 EMARHGVAPFVK------ECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLD 237
Query: 188 GLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMM-ISRG 244
+AGR ++ +++ G P VTY ++ G + G+LE A++++ +M +S+
Sbjct: 238 SFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKK 297
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
S TYN VE A L +M G P +TY+ L+ L K + A
Sbjct: 298 --ASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
EM+ +G DL T LI+ C+ +A F D+ R GL P LT+ L D +
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415
Query: 365 KKRGMTALAQKL 376
+ G A++L
Sbjct: 416 CRLGDLEGARRL 427
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+EM + G+ P N V+ L +A R++++ + L P++ TY +L+ +CKA
Sbjct: 183 QEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKA 242
Query: 228 GDLEGASKILKMMISR--GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G ++ A +LK M +R G LP+ TYN ++ G++E A L M S
Sbjct: 243 GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA-SAF 301
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ L+ L D ++ A + EM+ G + T LI L + + A +F++M
Sbjct: 302 TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+GL+P +T+ L + + K G L Q LC
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAG--NLKQALC 391
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 167/351 (47%), Gaps = 9/351 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K K + A+ L +K+ PD T+ LI + G ++ AI F
Sbjct: 339 IIDGMCKDKHVNDAFDLYSEKVSKRIFPDVF---TYNALISGFCIVGKLKDAIDLF---- 391
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N KN F IL+D CK G +K A + QS P V Y+ L++G+
Sbjct: 392 NKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM--MKQSIKPDVVTYSSLMDGYC 449
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V AE + M VT NV +Y ++ G+C+++ VD A++L KEM + I P+ I
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++IDGL ++GR +++ P ++TY S++ CK ++ A +L +
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P TY + + GK+EDA ++ ++ GY D Y ++++ C +
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D A+ + +M+ GC D T ++I L + D A +MI RGL+
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 171/354 (48%), Gaps = 10/354 (2%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
G+E PD ++ TF I+ + G + A+ F + + + F + L++ L
Sbjct: 257 NGYE-PDTITLTTF---IKGFCLKGQIHQAL---HFHDKV-IAMGFHLDQVSYGTLINGL 308
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G KAA E R+ + P V +YN +++G + K+V DA + E + + P
Sbjct: 309 CKVGETKAALELL--RRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFP 366
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V TY L+ G+C + ++ AI L +M + I P+ ++ ++DG + G +E ++
Sbjct: 367 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 426
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P +VTY+SL+ GYC ++ A I M RG + +YN F K
Sbjct: 427 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI 486
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
V++AM L+++M PD +TY L+ LCK ++ A+++ EM RG D+ T
Sbjct: 487 KMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITY 546
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ LC+ + D+A + +G+ P T+ L + G A+K+
Sbjct: 547 NSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKV 600
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C G++K A + F+K ++ P V ++IL++G+ + N+K+A+
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKMTS--KNIIPDVYTFSILVDGFCKDGNIKEAKNVLAM 428
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+++ P+VVTY +L++GYC + V++A + M G+ N YN +I+G +
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + P ++TY+SL+ G CK+G + A +++ M RG P TYN
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K V+ A+ L K+ G PD TY IL+K LC+ KL+ A +V +++ +G
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++D+ T++I C FDEA A M G +P T++ + ++ +A+
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668
Query: 375 KL 376
KL
Sbjct: 669 KL 670
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 140/303 (46%), Gaps = 6/303 (1%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K L + P + G+ + A F ++ + V+YGTL+ G C++
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
A+ L++ + ++P+ ++YNT+IDG+ + + + + P + TY
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ G+C G L+ A + M S+ +P T++ F K G +++A N+ M++
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
PD +TY L+ C ++++ A + M RG ++ + ++I+ C++ DEA
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVPRSMELLDS 392
F++M + + P +T+ L D K G + A +L + M + +LD+
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552
Query: 393 RCK 395
CK
Sbjct: 553 LCK 555
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 26/382 (6%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-------------- 47
++VL + E D A L+D + G P + LI++ +G
Sbjct: 74 LRVLVRRGELDDAL-RLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAASGP 132
Query: 48 ---MVEAAIWTFEFANNLDMVKNF------DSGASLFEILLDSLCKQGRVKAASEYFHKR 98
+ A + + A LD + + A + L+ LC +GR A
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
+ P V Y ILL + K A + EM + P++VTY ++ G C+
Sbjct: 193 --FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEG 250
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
RV+ A+ +K + G EPN + YN V+ GL A R+E+ +ME P +VT+
Sbjct: 251 RVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L+ C+ G +E A ++L+ M G P+ +YN F K K+ AM M+
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD ++Y+ LL LC+ ++D+AI++ ++K +GC L + +I L + K EA
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEA 430
Query: 339 SAEFEDMIRRGLVPHYLTFKRL 360
++M +GL P +T+ +
Sbjct: 431 LELLDEMTSKGLQPDIITYSTI 452
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 162/353 (45%), Gaps = 14/353 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ A + D+A L+ D +P T+ LIR G A+ E
Sbjct: 140 MVAGYCGAGQLDAARRLVAD------MPVEPDAYTYNTLIRGLCGRGRTSNALAVLE--- 190
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM + + ILL++ CK+ K A + + D+ AP + YN++LNG
Sbjct: 191 --DMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH--DKGCAPDIVTYNVVLNGI 246
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V+DA F + PN V+Y +++G R + A +L++EM +G PN
Sbjct: 247 CQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNV 306
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +N +I L G E ++E+ P ++Y L+ +CK + A + +++
Sbjct: 307 VTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+SRG P +YN + G+V+ A+ L ++ + G +P ++Y+ ++ L K K
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
A+++ EM +G D+ T + + LCR + +EA F + G+ P
Sbjct: 427 TKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRP 479
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 2/240 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+ LC++G V+ A E + + P YN LL+ + + K + A F
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQY--GCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P++V+Y TL+ CR VD AI L+ +++ +G P I YNTVIDGL +AG+
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E +++ P ++TY+++ G C+ +E A + + G P+ YN
Sbjct: 427 TKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNA 486
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + +A++L+ MI SG P+ TY IL++ L E + A ++ ++ RG
Sbjct: 487 ILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 138/313 (44%), Gaps = 39/313 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++L+ +C++GRV+ A E+ K L P YNI+L G F ++ +DAE+
Sbjct: 239 YNVVLNGICQEGRVEDAMEFL---KNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLME 295
Query: 134 EMRKENVTPNVVT-----------------------------------YGTLVEGYCRLR 158
EM + PNVVT Y L+ +C+ +
Sbjct: 296 EMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQK 355
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
++ +A+ V+ M G P+ + YNT++ L G + ++ + P +++Y
Sbjct: 356 KIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYN 415
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G KAG + A ++L M S+G P TY+ + ++E+A+ + K+ +
Sbjct: 416 TVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P Y+ +L LCK + AI + M GC + T T+L+ L EA
Sbjct: 476 GIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA 535
Query: 339 SAEFEDMIRRGLV 351
F + RG+V
Sbjct: 536 RELFAQLCSRGVV 548
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 6/260 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI R G+VE A+ E N S + LL + CKQ ++ A E+
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS----YNPLLHAFCKQKKIHKAMEF 363
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P + YN LL R+ V A +++ + +P +++Y T+++G
Sbjct: 364 VELM--VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGL 421
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ + A+ L+ EM +G++P+ I Y+T+ GL R EE + PT
Sbjct: 422 TKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTA 481
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
Y +++ G CK + A + MIS G +P+ +TY + G V++A L+ +
Sbjct: 482 ALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ 541
Query: 275 MIESGYTPDRLTYHILLKIL 294
+ G +L +K+L
Sbjct: 542 LCSRGVVNKKLMKKGSIKML 561
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 187/377 (49%), Gaps = 11/377 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E +A LL G P+ V +T +I + +V A F
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT---IIDSMCKVKLVNEAFDLFS--- 249
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+ K + L+ C G++ A + F+K + ++ P V +NIL+N +
Sbjct: 250 --EMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM--ILENIKPDVYTFNILVNAF 305
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +K+ + + M K+ + PN VTY +L++GYC ++ V++A + M + G+ P+
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y+ +I+G + +F+E + + P +VTY+SL+ G K+G + A +++
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M RG P+ TYN K +V+ A+ L K+ + G P+ TY IL+K LC+ K
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A +V + + +G ++++DT T++I C F+EA A M G +P T++
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 360 LNDEFKKRGMTALAQKL 376
+ K+ +A+KL
Sbjct: 546 IILSLFKKDENDMAEKL 562
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 175/352 (49%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K K + A+ L + I PD V T+ LI + G + AI F
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVV---TYSALISGFCILGKLNDAIDLF---- 283
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +++N F IL+++ CK G++K F + Q P YN L++G+
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM--MKQGIKPNFVTYNSLMDGYC 341
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V A+ + M + V P++ +Y ++ G+C++++ D A+ L KEM ++ I P+ +
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++IDGL ++GR ++++ PT+ TY S++ CK ++ A +L +
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY+ + + GK+EDA ++ ++ G+ + TY I+++ C E
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ A+ + +M+ GC D T ++I L + + D A +MI RG+ P
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 166/335 (49%), Gaps = 11/335 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + TF LI+ G ++ A F F + + + F + L+ LCK G
Sbjct: 152 VPDTI---TFTTLIKGLCLKGQIQQA---FLFHDKV-VALGFHFDQISYGTLIHGLCKVG 204
Query: 87 RVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+AA + + +D + P V +YN +++ + K V +A + EM + ++P+VV
Sbjct: 205 ETRAALDLLQR---VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ G+C L +++ AI L +M E I+P+ +N +++ + G+ +E + +
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTY SL+ GYC ++ A I M G P +Y+ F K K
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++AMNL+++M PD +TY L+ L K ++ A+Q+ +M RG + T +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ LC++++ D+A A + +G+ P+ T+ L
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 159/326 (48%), Gaps = 8/326 (2%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
IL++ C+ G + A F K L + P + L+ G ++ A F ++
Sbjct: 124 NILINCFCQLGLIPFAFSVF--AKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKV 181
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ ++YGTL+ G C++ A+ L++ + ++PN ++YNT+ID + +
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
E + + P +VTY++L+ G+C G L A + MI P T+N
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNIL 301
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K GK+++ ++ M++ G P+ +TY+ L+ C +++ A + M G
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ D+ + +++I+ C++ KFDEA F++M R+ ++P +T+ L D K G + A +
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421
Query: 376 LCNVMS--SVPRSM----ELLDSRCK 395
L + M VP ++ +LD+ CK
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCK 447
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 36/299 (12%)
Query: 120 FRSKN-VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
F S N V DA + + + N TP + ++ + + + L ++M GI+PN
Sbjct: 60 FHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 119
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ N +I+ + G + + L P +T+T+L+KG C G ++ A
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHD 179
Query: 239 MMISRGF-----------------------------------LPSPTTYNYFFRYFSKFG 263
+++ GF P+ YN K
Sbjct: 180 KVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVK 239
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
V +A +L+ +MI G +PD +TY L+ C KL+ AI + +M D+ T
Sbjct: 240 LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+L++ C+ K E F+ M+++G+ P+++T+ L D + A+ + N M+
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 105/238 (44%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N ++Y + + VD A+ L + + P A +N ++ LV++ + V +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++ P +V L+ +C+ G + A + ++ G++P T+ +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+++ A + K++ G+ D+++Y L+ LCK + A+ + + + ++
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+I +C++ +EA F +MI +G+ P +T+ L F G A L N M
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 158/310 (50%), Gaps = 6/310 (1%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
ILL LC + R + A E H + AP V Y ++NG+F+ + A + EM
Sbjct: 163 ILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEM 222
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
++P+VVTY +++ C+ + +D+A+ ++ M K G+ PN Y +++ G +G+
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQP 282
Query: 196 EEVSGMMERFLV--CEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+E G +++ EP P + TY +L++GY G L G +L +M+ G P
Sbjct: 283 KEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHY 342
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
YN ++K GKV++AM ++ KM + G PD +TY ++ ILCK +++ A+ ++M
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G LIH LC K++ A +M+ RG+ + + F + D K G
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 462
Query: 371 ALAQKLCNVM 380
++KL ++M
Sbjct: 463 IESEKLFDLM 472
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 10/358 (2%)
Query: 28 PDFVSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCK 84
PD + D T+ L++ YA G + + MV+N ++ IL+ + K
Sbjct: 299 PDGLEPDIATYCTLLQGYATKGALVGMHALLDL-----MVRNGIHPDHYVYNILICAYAK 353
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
QG+V A F K ++ Q P Y ++ +S V+DA ++ +M E ++P
Sbjct: 354 QGKVDEAMLVFSKMRQ--QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 411
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+ Y +L+ G C + +RA L+ EM GI N I +N++ID + GR E + +
Sbjct: 412 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 471
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P ++TY++L+ GYC AG ++ A K+L M+S G P+ TY + K +
Sbjct: 472 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISR 531
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+ DA+ L+++M SG +PD +TY+I+L+ L + + A ++ + G I+L T +
Sbjct: 532 MGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 591
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++H LC+ D+A F+++ L TF + D K G A+ L SS
Sbjct: 592 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSS 649
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 177/371 (47%), Gaps = 20/371 (5%)
Query: 13 SAWCLLLDK-------IGGHEVPDF-----VSKDTFV--ILIRRYARAGMVEAAIWTFEF 58
+ +C LL +G H + D + D +V ILI YA+ G V+ A+ F
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + A + ++ LCK GRV+ A YF + +D+ +P VYN L++G
Sbjct: 367 MRQ----QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM--IDEGLSPGNIVYNSLIHG 420
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ AE LEM + N + + ++++ +C+ RV + +L M + G++P+
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I Y+T+IDG AG+ +E ++ + P VTY +L+ GYCK + A + K
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFK 540
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M S G P TYN + + + A LY ++ ESG + TY+I+L LCK
Sbjct: 541 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 600
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
D A+++ + + ++ T ++I L ++ + EA F GLVP+Y T++
Sbjct: 601 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYR 660
Query: 359 RLNDEFKKRGM 369
+ + +G+
Sbjct: 661 LMAENIIGQGL 671
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 11/251 (4%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VTP V TY L+ CR R+D + + K+G AI + ++ GL R +
Sbjct: 83 VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 200 GM-MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYF 255
+ + R P + + T L+KG C + A ++ MM G P +Y
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K G A + Y +M++ +PD +TY ++ LCK +D A++V M G
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR------GLVPHYLTFKRLNDEFKKRGM 369
+ T T ++H C + EA F +R GL P T+ L + +G
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIG-FLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321
Query: 370 TALAQKLCNVM 380
L ++M
Sbjct: 322 LVGMHALLDLM 332
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 106/255 (41%), Gaps = 2/255 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A + + P Y L+NG+ + + DA + E
Sbjct: 484 YSTLIDGYCLAGKMDEAMKLLSGMVSV--GLKPNTVTYRTLINGYCKISRMGDALVLFKE 541
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 542 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 601
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ M + + + T+ ++ K G A + S G +P+ TY
Sbjct: 602 TDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRL 661
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +E+ L+ M ++G T D + +++ L + ++ A + +
Sbjct: 662 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 721
Query: 315 CDIDLDTSTMLIHLL 329
++ T+++ I LL
Sbjct: 722 FSLEASTASLFIDLL 736
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 184/387 (47%), Gaps = 19/387 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+IK L +A + +A L+L+++ H V PD + TF L++ + G +EAA+
Sbjct: 203 LIKALCRAHQVRTA-VLMLEEMSSHGVAPD---ETTFTTLMQGFIEEGSIEAALRV---- 254
Query: 60 NNLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
K ++G S +L++ CK GRV+ A Y ++E+ + P YN
Sbjct: 255 ----KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYI--QQEIADGFEPDQVTYNTF 308
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++G ++ +V A + M +E P+V TY T++ + +D A +V +M G
Sbjct: 309 VHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ +NT+I L R EE + V P + T+ L+ CK GD +
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ + M S G P TYN + GK+ +A++L +M +G +TY+ ++ LC
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ +++ A +V +M +G T LI LC+ + D+A+ E M++ GL P+ +
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSS 382
T+ + + K+G A + M++
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTA 575
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 185/401 (46%), Gaps = 14/401 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-IWTFEFAN 60
++ A+ + FD A L+L+++ V DT V + +VE + + E
Sbjct: 131 VESYARLRRFDDAVDLVLNQLDNDTFG--VQADTVVF---NHLLNVLVEGSKLKLLESVY 185
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + L+ +LC+ +V+ A + AP + L+ G+
Sbjct: 186 NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS--HGVAPDETTFTTLMQGFI 243
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ A R +M + +P VT L+ GYC++ RV+ A+ +++ +G EP+ +
Sbjct: 244 EEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQV 303
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT + GL + G +M+ L P + TY +++ K G+L+ A I+ M
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG LP TT+N S ++E+A++L R++ G +PD T++IL+ LCK
Sbjct: 364 VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 423
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
L I++ +EMK GC D T +LI LC M K A +M G +T+ +
Sbjct: 424 HLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTI 483
Query: 361 NDEFKKRGMTALAQKLCNVMSS--VPRSM----ELLDSRCK 395
D K+ A+++ + M + + RS L+D CK
Sbjct: 484 IDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCK 524
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K E D A ++ + +PD + +T ++ + R +E A+ + A
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR---LEEAL---DLAR 396
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L VK F IL+++LCK G F + K P YNIL++
Sbjct: 397 EL-TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS--SGCTPDEVTYNILIDHLC 453
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A EM + VTY T+++ C+ R++ A + +M +GI +A+
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAV 513
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL +A R ++ + ++E+ + P +TY S++ YCK G+++ A+ IL+ M
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K G+ + A+ L R M G P Y+ +++ L + + L
Sbjct: 574 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 633
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M+ +G +P + +F+
Sbjct: 634 RDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 693
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 694 LAEGLLNLGM 703
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 115/299 (38%), Gaps = 73/299 (24%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE--------------------- 173
+ +E+ P+ Y +V+ D LV+EMR+E
Sbjct: 80 LAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRR 139
Query: 174 -----------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
G++ + +V+N +++ LVE + + + + P +VT
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVT 199
Query: 217 YTSLVKGYCKA-----------------------------------GDLEGASKILKMMI 241
+L+K C+A G +E A ++ M+
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G P+ T N + K G+VEDA+ ++ I G+ PD++TY+ + LC+ +
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS 319
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A++V M G D D+ T +I+ L + + DEA M+ RG +P TF L
Sbjct: 320 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 378
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 167/310 (53%), Gaps = 16/310 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I++L +A + + A C+LLD G E +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEW----DEDLWVLMIDSYGKKGIVQESVKLFQKM 106
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L + + S +LF+++L ++GR A YF+K L++ PT +N+++ G+
Sbjct: 107 EELGVERTIKSYDALFKVIL----RRGRFMMAKRYFNKM--LNEGIEPTRHTFNVMIWGF 160
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F S V+ A F+ +M+ ++TP+V+TY TL+ GY R+++++ A R EM+ IEP
Sbjct: 161 FLSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTV 220
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y T+I G V R ++ +ME P +TY++L+ G C A + A ILK
Sbjct: 221 ITYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKE 280
Query: 240 MISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M+ + +PT + F + S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 281 MVDKYI--APTDNSIFLKLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCK 338
Query: 297 EDKLDLAIQV 306
+K D A+ +
Sbjct: 339 AEKYDKAVNL 348
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLNE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E + P ++TY +L+ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ M R P+ TY + + +V+DA++L +M G P+ +TY LL
Sbjct: 205 ERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
LC +K+ A + KEM + D LI C+ D A+ + MIR
Sbjct: 265 LCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLKAMIR 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 26/263 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ Y V+ A+ E + N A + LL LC ++ A
Sbjct: 222 TYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPN----AITYSTLLPGLCNAEKMSEAQSI 277
Query: 95 FHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ +D+ APT ++ L++G ++ N+ A M + +V YG L+E
Sbjct: 278 L--KEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIEN 335
Query: 154 YCRLRRVDRAIRLVKEMRKEGI----------EPNAIVYNTVIDGLVEAGRFEEVSGMME 203
YC+ + D+A+ L+ ++ ++ I EP+A YN +I+ L + G+ + ++
Sbjct: 336 YCKAEKYDKAVNLLDKLIEKDIILRPQSTLHMEPSA--YNPMIEYLCDNGQTAKAETLVR 393
Query: 204 RFL---VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ + V EP +L++G+ + G + A ++LK+M+ R + Y+ + +
Sbjct: 394 QLMKLGVQEP----TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYL 449
Query: 261 KFGKVEDAMNLYRKMIESGYTPD 283
K + DA MIE+G+ PD
Sbjct: 450 KKNEPADAKAALDSMIENGHLPD 472
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R + T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGAKKTEHALQFFRWVE-RSNLFQHDRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M++ G P+ T+N F GKVE A + M TPD +TY+
Sbjct: 130 RFMMAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ + K++ A + EMK R + + T T LI + + D+A + E+M
Sbjct: 190 TLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S ++L+ +CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCK 303
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 12/371 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ +L +K+F W L++ E DF +S F ++ R Y+RA + AI F+
Sbjct: 114 LVDILGSSKQFALLWDFLIEI---RESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRM 170
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ D + LL LCK+ K A + F + K Q+ A T Y+IL+ GW
Sbjct: 171 VEFGLKPTIDD----LDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKT---YSILVRGW 223
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
A + + EMR++ +V+ Y +L+E +C+ +V A ++ +EM GI+P+A
Sbjct: 224 GDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDA 283
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
++ I EA +++ + P + TY ++K CK +E A ++L
Sbjct: 284 CTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNE 343
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+I R P +YN Y + +V A L +M++ PD+ +Y++LLK+L + +
Sbjct: 344 IIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGR 403
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY-KFDEASAEFEDMIRRGLVPHYLTFK 358
D AI+V + M +G + T ++++H LC+ K +EA FE MI G+ P+ T +
Sbjct: 404 FDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVE 463
Query: 359 RLNDEFKKRGM 369
L + G+
Sbjct: 464 ILRNRLIGLGL 474
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 182/372 (48%), Gaps = 17/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L +A D +L+D++ H + F T+ IL R G E+ FA
Sbjct: 270 LLSGLCRAGRMDETR-VLMDEMASHSM--FPDGFTYSILFDGLTRTG--ESRTMLSLFAE 324
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L K GA ILL+ LCK G+V A + + PT +YN L+NG+
Sbjct: 325 SLK--KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML--VHTGLVPTTVIYNTLINGYC 380
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++++ A + +M+ ++ P+ +TY L+ G C+L V +A LV EM K G++P+
Sbjct: 381 QVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE 440
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+NT+ID AG+ E+ +S M ++ + + ++++ S+VK +CK G + A I
Sbjct: 441 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD----VISFGSVVKAFCKNGKIPEAVAI 496
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI + P+ YN + + G E A L KM SG + +TY++LLK LC+
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 556
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
++D A ++ ++ +G D+ + +I C D+A ++M + G+ P T
Sbjct: 557 SSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616
Query: 357 FKRLNDEFKKRG 368
+ L G
Sbjct: 617 YHTLVSALASAG 628
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 13/376 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+++ A + D A ++ + + G PD S + ++I R+G A+ F+
Sbjct: 163 VVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFS---YNVVIAGLWRSGKGSDALKVFDE 219
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE-LDQSWAPTVRVYNILLN 117
++ +V N+ + + ++D K G ++A F R + L P + YN+LL+
Sbjct: 220 MVDMGVVPNWIT----YNTMIDGHVKGGDLEAG---FRLRDQMLHDGPKPNIVTYNVLLS 272
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G R+ + + EM ++ P+ TY L +G R + L E K+G+
Sbjct: 273 GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 332
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
A + +++GL + G+ + ++E + PT V Y +L+ GYC+ DL GA I
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M SR P TYN K V A +L +M +SG P T++ L+
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+L+ V +M+ +G D+ + ++ C+ K EA A +DMI + + P+ +
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512
Query: 358 KRLNDEFKKRGMTALA 373
+ D + + G T A
Sbjct: 513 NSIIDAYIESGDTEQA 528
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 6/252 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +TF LI Y AG +E F +++ K S F ++ + CK G++ A
Sbjct: 438 SVETFNTLIDAYGTAGQLEKC---FTVLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEA 493
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ + AP +VYN +++ + S + + A +M+ V+ ++VTY L+
Sbjct: 494 VAILDDM--IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G CR ++D A L+ +R +G+ P+ + YNT+I G ++ +++
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+ TY +LV AG + + + M+ + PS + Y + + +L
Sbjct: 612 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671
Query: 272 YRKMIESGYTPD 283
++M E G D
Sbjct: 672 KKEMSEKGIAFD 683
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L++ LCK V A + E+++S P+V +N L++ + + ++
Sbjct: 407 YNALINGLCKLEMVTKAEDLV---MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 463
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+++ + +V+++G++V+ +C+ ++ A+ ++ +M + + PNA VYN++ID +E+G
Sbjct: 464 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG 523
Query: 194 RFEEVSGMMERFL-----------------VCEPG------------------PTMVTYT 218
E+ ++E+ +C P +V+Y
Sbjct: 524 DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYN 583
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ C GD + A ++L+ M G P+ TY+ + G+V D LY++M+
Sbjct: 584 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 643
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
P Y I++ + + + KEM +G D
Sbjct: 644 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 8/228 (3%)
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ N +++ L+ GR +V + P + +V+ AGDL+ A +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 237 LKMMISRGFLPSPT--TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++ M P P +YN + GK DA+ ++ +M++ G P+ +TY+ ++
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
K L+ ++ +M G ++ T +L+ LCR + DE ++M + P
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299
Query: 355 LTFKRLNDEFKKRG-----MTALAQKL-CNVMSSVPRSMELLDSRCKD 396
T+ L D + G ++ A+ L VM LL+ CKD
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKD 347
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 5/326 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI + R G +E F L + + + LL LC RV A++
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAF----GLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P V YN ++NG+FR V+ A +LEM + + PNVVTY T+++G
Sbjct: 148 LLLRMS-EFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + VDRA + ++M G++P+ YN +I G + G+++EV M+E P
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY L+ CK G A M +G P Y ++ G + + +
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ +G +P+R ++I+ K+ ++ A+ + +M+ +G D+ + LI LC++ +
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A +F MI G+ P+ F L
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSL 412
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 172/351 (49%), Gaps = 8/351 (2%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
LD + G+ V ++ F I+ YA+ M+E A+ F + + S F
Sbjct: 323 FLDLMVGNGVSP--NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS----FGA 376
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+D+LCK GRV A F++ +++ P + V++ L+ G + AE + E+
Sbjct: 377 LIDALCKLGRVDDAVLQFNQM--INEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLD 434
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + + V + TL+ C RV A RL+ M + G+ PN I YNT++ G GR +E
Sbjct: 435 QGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDE 494
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ +++ + P TYT L++GYCKA ++ A + + M+ +G P TYN
Sbjct: 495 AAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILH 554
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ G+ +A LY MI S D TY+I+L LCK + +D A ++ + + + +
Sbjct: 555 GLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQL 614
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T ++I L + + ++A F + GLVP +T++ + + + G
Sbjct: 615 DSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEG 665
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 167/384 (43%), Gaps = 12/384 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVP-DFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++K L AK D A +LL ++ P D V+ +T +I + R G VE A F
Sbjct: 131 LLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNT---VINGFFREGQVEKAYNLF--- 184
Query: 60 NNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L+M+ + + ++D LCK V A F + +D+ P YN L++G
Sbjct: 185 --LEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQM--IDRGVKPDNGTYNCLIHG 240
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + K+ + EM + P+ +TY L++ C+ R A M ++GI+P+
Sbjct: 241 YLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPD 300
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+Y ++ G G E+ ++ + P + + Y K +E A I
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M +G P ++ K G+V+DA+ + +MI G TP+ + L+ LC
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVG 420
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K + A ++ E+ +G +D L+ LC + EA + MIR G+ P+ +++
Sbjct: 421 KWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYN 480
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
L G A KL +VM S
Sbjct: 481 TLVAGHCLTGRIDEAAKLLDVMVS 504
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A F L+ +LC +GRV A + P V YN L+ G + + +A +
Sbjct: 441 AVFFNTLMCNLCNEGRVMEAQRLIDLMIRV--GVRPNVISYNTLVAGHCLTGRIDEAAKL 498
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + PN TY L+ GYC+ RRVD A L +EM +G+ P YNT++ GL +
Sbjct: 499 LDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQ 558
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GRF E + + + + TY ++ G CK ++ A K+ + + S+ T
Sbjct: 559 TGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVT 618
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+N K G+ EDAM+L+ + G PD +TY ++ + L +E L
Sbjct: 619 FNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSL 667
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 9/281 (3%)
Query: 108 TVRVYNILLNGWFRSKNVKDAER---FWLEMRKE---NVTPNVVTYGTLVEGYCRLRRVD 161
+VR +N LL R+ +ER + M +E V PN TY L+ +CR+ R++
Sbjct: 48 SVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLE 107
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTS 219
+ K G N IV + ++ GL +A R +E + ++ + E G P +V Y +
Sbjct: 108 HGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDIL-LLRMSEFGCPPDVVAYNT 166
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++ G+ + G +E A + M+ +G P+ TY K V+ A ++++MI+ G
Sbjct: 167 VINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRG 226
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD TY+ L+ K +Q+ +EM G + D T +L+ LC+ + EA
Sbjct: 227 VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M R+G+ P + L + +G + ++M
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 2/257 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C GR+ A++ + P Y ILL G+ +++ V DA + E
Sbjct: 479 YNTLVAGHCLTGRIDEAAKLLDVM--VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFRE 536
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + VTP V TY T++ G + R A L M + + YN +++GL +
Sbjct: 537 MLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNF 596
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M R +P VT+ ++ K G E A + + + G +P TY
Sbjct: 597 VDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRL 656
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G + + L+ M +SG P+ + L++ L + A ++ +
Sbjct: 657 IAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKN 716
Query: 315 CDIDLDTSTMLIHLLCR 331
++ T++MLI L R
Sbjct: 717 FSLEASTTSMLISLYSR 733
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 183/389 (47%), Gaps = 25/389 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L +AK+ + ++ L + PD T+ ILI + +AG++E A F+
Sbjct: 458 VITFLCQAKKVEKSFLLFQEMKRAGVNPDVY---TYTILIDSFCKAGLIEQARSWFDEMR 514
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ N + + LL + K ++ A + FH+ +D + P Y+ L++G
Sbjct: 515 SVGCSPNVVT----YTALLHAYLKSKQLIQAHDIFHRM--VDAACYPNAVTYSALIDGLC 568
Query: 121 RSKNVKDA---------------ERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAI 164
++ ++ A F+ E + PNVVTYG L++G C+ ++V A
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ M G EPN IVY+ +IDG + G+ + + R C P++ TYTSL+
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRM 688
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
K G L+ A K+L M++ P+ TY SK G++E A+NL M E G +P+
Sbjct: 689 FKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY L+ L K K D ++++ K+M +GC + T +LI+ C DEA ++
Sbjct: 749 VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
M H + F K+ + +L
Sbjct: 809 MKHTHWPKHLQGYHCAVQGFSKKFIASLG 837
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 166/335 (49%), Gaps = 18/335 (5%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M K F S + ++ LC+ +V+ + F + K + P V Y IL++ + ++
Sbjct: 444 MRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN--PDVYTYTILIDSFCKAG 501
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ A ++ EMR +PNVVTY L+ Y + +++ +A + M PNA+ Y+
Sbjct: 502 LIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYS 561
Query: 184 TVIDGLVEAGRFEEVSGMMERFL----------------VCEPGPTMVTYTSLVKGYCKA 227
+IDGL +AG ++ + E+ + C P +VTY +L+ G CKA
Sbjct: 562 ALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKA 621
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
+ A ++L M++ G P+ Y+ F K GK+++A ++ +M + GY P TY
Sbjct: 622 QKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTY 681
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L+ + K+ +LDLA++V EM C+ ++ T T +I L ++ + ++A M
Sbjct: 682 TSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE 741
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+G P+ +T+ L D K G + KL M+S
Sbjct: 742 KGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNS 776
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 184/408 (45%), Gaps = 25/408 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +F+ A+ +L + + VPD T+ +I +A VE + F+
Sbjct: 425 RCLCGVGKFEKAFQILKEMMRKGFVPD---TSTYTKVITFLCQAKKVEKSFLLFQEMKR- 480
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+ + IL+DS CK G ++ A +F + + + S P V Y LL+ + +S
Sbjct: 481 ---AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCS--PNVVTYTALLHAYLKS 535
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK---------- 172
K + A + M PN VTY L++G C+ + +A + +++
Sbjct: 536 KQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFY 595
Query: 173 -EG-----IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EG I PN + Y +IDGL +A + + +++ L P + Y +L+ G+CK
Sbjct: 596 FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G ++ A ++ M G+LPS TY K G+++ AM + +M+ P+ +T
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ L K +++ A+ + M+ +GC ++ T T LI L + K D + F+ M
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN 775
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
+G P+Y+T++ L + G+ A L + M L C
Sbjct: 776 SKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHC 823
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 142/290 (48%), Gaps = 7/290 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK G++ A E F + + + P+V Y L++ F+ + A +
Sbjct: 645 VYDALIDGFCKIGKIDNAQEVFLRMTKC--GYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM ++ PNVVTY +++G ++ +++A+ L+ M ++G PN + Y +IDGL + G
Sbjct: 703 EMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + ++ P VTY L+ C AG L+ A +L M + Y+
Sbjct: 763 KADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYH 822
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ FSK K ++ L +M P Y +L+ K +L+ A+++ KE+
Sbjct: 823 CAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEV 880
Query: 314 GCDIDLDTSTM---LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ ++ M LI LC + +EA + +M R+G+VP + F L
Sbjct: 881 SSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSL 930
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 175/424 (41%), Gaps = 37/424 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A F+ A L +P+ V+ T + + + G + I
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII------- 329
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N+ M + + SLF L+ C G A + F++ P YNI +
Sbjct: 330 NMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSP--PGYVAYNIFIGSIC 387
Query: 121 RSKNVKDAE------RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+ + +AE + + EM + N V C + + ++A +++KEM ++G
Sbjct: 388 GQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKG 447
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
P+ Y VI L +A + E+ + + P + TYT L+ +CKAG +E A
Sbjct: 448 FVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQAR 507
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
M S G P+ TY + K ++ A +++ +M+++ P+ +TY L+ L
Sbjct: 508 SWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGL 567
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLD----------------TSTMLIHLLCRMYKFDEA 338
CK ++ A +V +++ +++ D T LI LC+ K +A
Sbjct: 568 CKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDS 392
+ M+ G P+ + + L D F K G AQ++ C + SV L+D
Sbjct: 628 HELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDR 687
Query: 393 RCKD 396
KD
Sbjct: 688 MFKD 691
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 11/293 (3%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L +L+ C+ G A E + K D + P+ YN L+ + V+ R
Sbjct: 171 LLNVLVRRCCRHGLWDEALEELGRLK--DFGYRPSAVTYNALVQVLASAGQVEMGFRVQK 228
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + T G + C++ R A+ + + KE + ++ +I GL+EA
Sbjct: 229 EMSASGFCMDRSTIGYFAQALCKVGRWADALNM---LEKEDFNLDTVLCTQMISGLMEAS 285
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F E + R P +VTY +L+ G+ K +I+ MM++ G P+P+ +N
Sbjct: 286 LFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFN 345
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK------LDLAIQVS 307
+ G A L+ +M G P + Y+I + +C +++ LDL +V
Sbjct: 346 SLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVY 405
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+EM C ++ + LC + KF++A ++M+R+G VP T+ ++
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKV 458
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 47/343 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA++ A LL + P+ + D LI + + G ++ A F
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDA---LIDGFCKIGKIDNAQEVF---- 666
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L M K + + L+D + K GR+ A + + L+ S P V Y +++G
Sbjct: 667 -LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM--LNDSCNPNVVTYTAMIDGL 723
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++ A M ++ +PNVVTY L++G + + D +++L K+M +G PN
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783
Query: 180 IVYNTVIDGLVEAGRFEE-----------------------VSGMMERFLVC-------- 208
+ Y +I+ AG +E V G ++F+
Sbjct: 784 VTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEME 843
Query: 209 --EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYFFRYFSKFG 263
E P Y L+ + KAG LE A ++ K ++ S + S Y +
Sbjct: 844 SHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLAS 903
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
+VE+A LY +M G PD + + L+K L + +K D A+Q+
Sbjct: 904 QVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAER 130
A ++ +L+DS K GR++ A E + E+ S T +Y L+ + V++A
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFT 910
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ EM ++ + P+++ + +LV+G + + D A++L EG+
Sbjct: 911 LYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGV 955
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 170/335 (50%), Gaps = 6/335 (1%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ ILI+ Y+ +G +E A FE KN + ++ ++ + G +K A
Sbjct: 286 SVATYSILIQWYSSSGDIEEAEKIFEEMRE----KNIEMDVYVYSSMISWSRRLGNMKRA 341
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
F + + D P Y L+ G ++ ++ AE LEM+ + V N+V + T +
Sbjct: 342 FALFDEMSQRD--IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM 399
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GYCR ++D A+RL M K+GI + YN + +GL + R++E ++ +
Sbjct: 400 DGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVK 459
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VT+T ++ YCK G+L A ++ + M +G +P+ TYN + K KV+ A +
Sbjct: 460 PNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI 519
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+MI G PD TY L+ C ++D A+++ EM+ +G ++ T T +I L +
Sbjct: 520 KSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSK 579
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ DEA +++M++ GL+P F L F K
Sbjct: 580 EGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 160/316 (50%), Gaps = 8/316 (2%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+ + IL+ G ++ A + F + +E ++ V VY+ +++ R N+K A
Sbjct: 286 SVATYSILIQWYSSSGDIEEAEKIFEEMRE--KNIEMDVYVYSSMISWSRRLGNMKRAFA 343
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ EM + ++ PN TYG L+ G C+ +++ A L+ EM+ +G++ N +++NT +DG
Sbjct: 344 LFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYC 403
Query: 191 EAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G+ +E + +ME+ + + TY L G CK + A IL M+ +G P
Sbjct: 404 RRGKMDEALRLQAIMEKKGI---NADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKP 460
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ T+ F + K G + +A L+R M + G P+ +TY+ L+ CK++K+ A ++
Sbjct: 461 NVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIK 520
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EM +G DL T + LIH C + + DEA F +M +G+ + T+ + K
Sbjct: 521 SEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKE 580
Query: 368 GMTALAQKLCNVMSSV 383
G A KL + M +
Sbjct: 581 GRADEAFKLYDEMMKI 596
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 21/362 (5%)
Query: 27 VPDFVSKDTFVI-------LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILL 79
V D+V + VI L+ R G V+ + F + + F+ +++
Sbjct: 167 VYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCV---RFFHRMVESNKFEIRVQSLTLVI 223
Query: 80 DSLCKQGRVKAASEYFHKRKELDQSWA-----PTVRVYNILLNGWFRSKNVKDAERFWLE 134
D LC++G V+ A E +D+ P V YN LLN + K+ K +
Sbjct: 224 DVLCRRGEVEKAKEL------MDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKL 277
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M KE V +V TY L++ Y ++ A ++ +EMR++ IE + VY+++I G
Sbjct: 278 MEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGN 337
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + + P TY +L+ G CKAG +E A +L M S+G + +N
Sbjct: 338 MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNT 397
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + GK+++A+ L M + G D TY+IL LCK + D A + M +G
Sbjct: 398 TMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKG 457
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T TM I + C+ EA F DM ++G VP+ +T+ L D + K+ A
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH 517
Query: 375 KL 376
K+
Sbjct: 518 KI 519
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 40/201 (19%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
VID L G E+ +M+ + G P + TY +L+ Y D +G +ILK+M
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMV--GKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLME 279
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+ S TY+ +++S G +E+A ++
Sbjct: 280 KEQVVFSVATYSILIQWYSSSGDIEEAEKIF----------------------------- 310
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
+EM+ + ++D+ + +I R+ A A F++M +R +VP+ T+ L
Sbjct: 311 ------EEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALI 364
Query: 362 DEFKKRGMTALAQKLCNVMSS 382
K G A+ L M S
Sbjct: 365 GGVCKAGQMEAAEILLLEMQS 385
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 156/327 (47%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LCK G+ A E F + + P V Y ++NG + A +
Sbjct: 171 FTTLINWLCKVGKFAQAMELFDDM--VARGCRPDVYTYTTIINGLCKIGETAAAAGLLKK 228
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY T+++ + + RRV+ A+ + M+ +GI P+ YN++I GL +
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E S ++ P +VT+ LV CK G + A +LK M G P TY+
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+S +V +A L+ MI G PD +Y+IL+ CK ++D A Q+ EM +G
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + LIH LC++ EA F++M G +P+ T+ L D F K+G A
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468
Query: 375 KLCNVMSSVPRSME------LLDSRCK 395
+L M S L+D+ CK
Sbjct: 469 RLFRAMQSTYSKPNLVMYNILIDAMCK 495
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 176/377 (46%), Gaps = 11/377 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D A+ +L I P V TF LI + G A+ F+
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIV---TFTTLINWLCKVGKFAQAMELFD--- 192
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DMV + + +++ LCK G AA+ K +E P V Y+ +++
Sbjct: 193 --DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE--AGCQPNVVTYSTIIDSH 248
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + V +A + M+ + ++P++ TY +L++G C + A L+ EMR I P+
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDI 308
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +N ++D + + G+ E G+++ P +VTY+SL+ GY ++ A K+
Sbjct: 309 VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDA 368
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI++G P +YN + K ++++A L+ +MI G TP+ ++Y+ L+ LC+
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A + K M G +L T ++L+ C+ F +A F M P+ + +
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 360 LNDEFKKRGMTALAQKL 376
L D K G A+KL
Sbjct: 489 LIDAMCKSGNLRDARKL 505
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 33/281 (11%)
Query: 75 FEILLDSLCKQGRVKAA-----------------------------SEYFHKRKELD--- 102
F +L+D++CK+G+V A SE RK D
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370
Query: 103 -QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ P V YNIL+NG+ + K + +A++ + EM + +TPN V+Y TL+ G C+L +
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A L K M G PN Y+ ++DG + G F + + P +V Y L+
Sbjct: 431 EARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
CK+G+L A K+ + +G P+ Y K G +++A+ +R M E G
Sbjct: 491 DAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 550
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
PD ++Y+++++ A+Q+ EM+ +G D+ T+
Sbjct: 551 PDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTT 591
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 163/360 (45%), Gaps = 13/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L K E +A LL +++ G P+ V+ T + R+ R V A+ F +
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQ--PNVVTYSTIIDSHRKDRR---VNEALDIFSY 263
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
VK + L+ LC + K AS ++ + L+ P + +N+L++
Sbjct: 264 MK----VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN--IMPDIVTFNVLVDT 317
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ V +A+ M + V P+VVTY +L+ GY V A +L M +G +P+
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN +I+G + R +E + + P V+Y +L+ G C+ G L A + K
Sbjct: 378 VFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFK 437
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M + G LP+ TY+ F K G A L+R M + P+ + Y+IL+ +CK
Sbjct: 438 NMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSG 497
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A ++ E+ +G + T +I+ LC+ DEA F +M G P +++
Sbjct: 498 NLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYN 557
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 36/321 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL ++ K G+ K+ EL +P + +IL+N + + V A +
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMEL-AGLSPNIYTLSILINCFSHLQRVDLAFSVLAK 158
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K + P +VT+ TL+ C++ + +A+ L +M G P+ Y T+I+GL + G
Sbjct: 159 IIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGE 218
Query: 195 FEEVSGMMERF--LVCEP---------------------------------GPTMVTYTS 219
+G++++ C+P P + TY S
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNS 278
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L++G C + AS +L M S +P T+N K GKV +A + + M E G
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD +TY L+ ++ A ++ M +GC D+ + +LI+ C++ + DEA
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 340 AEFEDMIRRGLVPHYLTFKRL 360
F +MI +GL P+ +++ L
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTL 419
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M ++PN+ T L+ + L+RVD A ++ ++ K G++P + + T+I+ L + G
Sbjct: 123 QMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVG 182
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+F + + + + P + TYT+++ G CK G+ A+ +LK M G P+ TY+
Sbjct: 183 KFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYS 242
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K +V +A++++ M G +PD TY+ L++ LC + A + EM+
Sbjct: 243 TIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D+ T +L+ +C+ K EA + M G+ P +T+ L + R A
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEA 362
Query: 374 QKLCNVM 380
+KL + M
Sbjct: 363 RKLFDAM 369
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 1/260 (0%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV-DRAIRLVKEMRKEGIEPNAIV 181
+N+ DA + M P ++ + L+ ++ + D I L K+M G+ PN
Sbjct: 76 RNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYT 135
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+ +I+ R + ++ + + PT+VT+T+L+ CK G A ++ M+
Sbjct: 136 LSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV 195
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+RG P TY K G+ A L +KM E+G P+ +TY ++ K+ +++
Sbjct: 196 ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVN 255
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + MK +G D+ T LI LC ++ EASA +M ++P +TF L
Sbjct: 256 EALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLV 315
Query: 362 DEFKKRGMTALAQKLCNVMS 381
D K G + AQ + M+
Sbjct: 316 DTICKEGKVSEAQGVLKTMT 335
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 172/353 (48%), Gaps = 20/353 (5%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF--EILLDSLCKQGRV 88
+S D F +LI+ YA+ M+E A+ +FE M+K+FD +F +L + ++ V
Sbjct: 124 ISADAFTVLIQAYAKMDMIEKAVESFE------MMKDFDCKPDVFTYNTVLHVMVRKEVV 177
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A +++ +L+ P + ++IL++G +S ++A + + EM + + PN +TY
Sbjct: 178 LLALGIYNRMLKLN--CLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYT 235
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM-----E 203
++ G C+ ++ D A RL M+ G P+++ YN ++ G + GR +E G++ +
Sbjct: 236 IIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKD 295
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R+++ + G Y+ L+ G +A E A + M P Y + SK G
Sbjct: 296 RYVLDKQG-----YSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAG 350
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA+ L +M E G PD Y+ L+K C LD A + E+ C T T
Sbjct: 351 KFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYT 410
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+LI +CR +A F +M + G P +TF L D F K G AQ L
Sbjct: 411 ILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLL 463
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 126/284 (44%), Gaps = 14/284 (4%)
Query: 103 QSWAPTVRVYNILL--NGWFRSKNVKDAERFWL---EMRKENVTPNVVTYGTLVEGYCRL 157
+SW + ++L+ NG+ E +W E+++ + + + L++ Y ++
Sbjct: 89 RSWVSHNMIIDMLIKDNGF---------ELYWQVLKEIKRCGFSISADAFTVLIQAYAKM 139
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+++A+ + M+ +P+ YNTV+ +V G+ R L P + T+
Sbjct: 140 DMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATF 199
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+ L+ G CK+G + A ++ M R LP+ TY + K + A L+ M +
Sbjct: 200 SILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKD 259
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G PD +TY+ LL CK ++D A+ + K + +D + LI L R +F++
Sbjct: 260 HGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFED 319
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
A + M + P + + + K G A +L N M+
Sbjct: 320 AQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT 363
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 133/328 (40%), Gaps = 46/328 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTF---EFANNLDMVKNFDSGA------SLFEILLDSLCKQ 85
TF LI + +AG +E A F E N + GA + + +++ LC
Sbjct: 443 TFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDS 502
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G + A + D +AP + YNIL++G+ ++ N+ A + + E++ + ++P+ V
Sbjct: 503 GLILKAYNILMQLT--DSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSV 560
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TYGTL+ G R + A ++ ++ K G P VY + + + + ++
Sbjct: 561 TYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKY 620
Query: 206 LVCEPGP----------------------------------TMVTYTSLVKGYCKAGDLE 231
L PG + YT + G C+AG LE
Sbjct: 621 LRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLE 680
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRLTYHIL 290
A KI + L +P + K G ++ A ++ I+ GY R+ +L
Sbjct: 681 EALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLL 740
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDID 318
+L EDK + A + MK G D+D
Sbjct: 741 KSLLRSEDKRNRAFDLLSRMKSLGYDLD 768
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 174/404 (43%), Gaps = 72/404 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMV-EAAIWTFEFA 59
M+K L+KA +F A LL + VPD + LI+ Y G++ EA E +
Sbjct: 342 MMKGLSKAGKFKDALRLLNEMTERGLVPD---THCYNALIKGYCDLGLLDEAKSLHLEIS 398
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + S A + IL+ +C+ G V A + F++ ++ P+V +N L++G+
Sbjct: 399 KN-----DCFSSACTYTILICGMCRSGLVGDAQQIFNEMEK--HGCYPSVVTFNALIDGF 451
Query: 120 FRSKNVKDAERFW----------------------------------------------- 132
++ N++ A+ +
Sbjct: 452 CKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNI 511
Query: 133 -LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+++ PN++TY L+ G+C+ ++ A +L KE++ +G+ P+++ Y T+I+GL+
Sbjct: 512 LMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLS 571
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-LKMMISRGFLPS-- 248
A R E+ ++++ L P Y S + C+ + A + LK + S +P
Sbjct: 572 ANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRS---IPGRD 628
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT---YHILLKILCKEDKLDLAIQ 305
F K G+VE+A+ R ++E + + Y I L LC+ +L+ A++
Sbjct: 629 SEVLKSVEENFEK-GEVEEAV---RGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALK 684
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ ++ + + LI+ L ++ D A+ F I +G
Sbjct: 685 IFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKG 728
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 158/308 (51%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC +GRV A E + E+ PT+ N L+NG + V DA
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHK--PTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VTYG +++ C+ + A+ L+++M + I+ +A+ Y+ +IDGL + G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + ++ YT+L++G+C AG + +K+L+ MI R P ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+ +A L+++MI+ G +PD +TY L+ CKE++LD A + M +G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C ++ T +LI+ C+ D+ F M RG+V +T+ L F + G +A+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 375 KLCNVMSS 382
+L M S
Sbjct: 443 ELFQEMVS 450
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D LCK G + A F++ + + + + +Y L+ G+ + D + +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEI--KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K +TP+VV + L++ + + ++ A L KEM + GI P+ + Y ++IDG + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + M++ + GP + T+ L+ GYCKA ++ ++ + M RG + TYN
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F + GK+E A L+++M+ PD ++Y ILL LC + + A+++ ++++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++D+ ++IH +C K D+A F + +G+ P T+ + K+G + A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 375 KL 376
L
Sbjct: 548 LL 549
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++ +K F + ++ L+ C GR ++
Sbjct: 250 YSIIIDGLCKDGSLDNA---FNLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + P V ++ L++ + + +++AE EM + ++P+ VTY +L++G+C
Sbjct: 306 --RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ ++D+A ++ M +G PN +N +I+G +A ++ + + + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L++G+C+ G LE A ++ + M+SR P +Y G+ E A+ ++ K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y+I++ +C K+D A + + +G D+ T ++I LC+
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
EA F M G P+ T+ L
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNIL 568
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ A +D LL D I PD V+ F LI + + G + A E +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA---FSALIDCFVKEGKLREA----EELH 340
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D CK+ ++ A+ + + P +R +NIL+NG+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM--VSKGCGPNIRTFNILINGYC 398
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + D + +M V + VTY TL++G+C L +++ A L +EM + P+ +
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G E+ + E+ + + Y ++ G C A ++ A + +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P TYN K G + +A L+RKM E G++P+ TY+IL++ E
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +E+K G +D T M++ +L
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P ++ + L R ++ D + L K+M +GI N + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ + M + + P VT+++L+ G C G + A +++ M+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI------------- 293
P+ T N GKV DA+ L +M+E+G+ P+ +TY +LK+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 294 ----------------------LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
LCK+ LD A + EM+ +G D+ T LI C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++D+ + DMI+R + P + F L D F K G A++L
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 6/193 (3%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P ++ ++ L + + + K M +G + T + + K+ A
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+I+ GY PD +T+ L+ LC E ++ A+++ M G L T L++ L
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME- 388
C K +A + M+ G P+ +T+ + K G TALA +L M ++
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA 247
Query: 389 -----LLDSRCKD 396
++D CKD
Sbjct: 248 VKYSIIIDGLCKD 260
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA++L+++M S P + + L ++ + + DL + + K+M+ +G +L T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++I+ CR K A + +I+ G P +TF L + G + A +L + M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 180/360 (50%), Gaps = 12/360 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +K +D L + + + +P+ V TF +LIR + R GMVE AI E
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNCMPNEV---TFDMLIRFFCRGGMVERAIQVLEQMT 310
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +L I+++S+CKQGRV A + + P Y +L G
Sbjct: 311 EHGCATN----TTLCNIVINSICKQGRVDDAFKLLNDMGSY--GCNPDTISYTTVLKGLC 364
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R++ DA+ EM + N PN VT+ T + C+ +++AI L+++M + G +
Sbjct: 365 RAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVV 424
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +++G G + +E F P +TYT+L+ G C A L+GA++++ M
Sbjct: 425 TYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEM 481
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P+ T+N +F + G +E+A+ L +M+E G TP+ +TY+ LL + K+
Sbjct: 482 LRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSS 541
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+++ + +G D+ T + +I +L + + +EA F + G+ P + + ++
Sbjct: 542 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKI 601
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 179/380 (47%), Gaps = 12/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+VL A LL D + P+ V T+ +L+ R E A+ +
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRGCQPNVV---TYTVLLEAMCRNSGFEQAMAVLDEMR 205
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + ++++ +C++GRV A E ++ + P Y LL G
Sbjct: 206 AKGCTPNIVT----YNVIINGMCREGRVDDARELLNRLPSY--GFQPDTVSYTTLLKGLC 259
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
SK D E + EM ++N PN VT+ L+ +CR V+RAI+++++M + G N
Sbjct: 260 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT 319
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ N VI+ + + GR ++ ++ P ++YT+++KG C+A + A ++L M
Sbjct: 320 LCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM 379
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P+ T+N F + G +E A+ L +M E G T +TY+ L+ C + +
Sbjct: 380 VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHI 439
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A+++ + M C+ I T T L+ LC + D A+ +M+R P+ +TF L
Sbjct: 440 DSALELFRSMPCKPNTI---TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVL 496
Query: 361 NDEFKKRGMTALAQKLCNVM 380
F ++G A +L M
Sbjct: 497 VSFFCQKGFLEEAIELVEQM 516
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 170/384 (44%), Gaps = 19/384 (4%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA---IWTFEFANNLD 63
+ + D+A L + G V F + L+ Y R G ++AA I + A +
Sbjct: 89 RGRTSDAARVLRAAEGSGSPVDVFA----YNTLVAGYCRYGHLDAARRLIGSMPVAPD-- 142
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
A + L+ LC +GRV A L + P V Y +LL R+
Sbjct: 143 --------AYTYTPLIRVLCDRGRVADALSLLDDM--LRRGCQPNVVTYTVLLEAMCRNS 192
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ A EMR + TPN+VTY ++ G CR RVD A L+ + G +P+ + Y
Sbjct: 193 GFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYT 252
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T++ GL + R+++V + + P VT+ L++ +C+ G +E A ++L+ M
Sbjct: 253 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G + T N K G+V+DA L M G PD ++Y +LK LC+ ++ D A
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDA 372
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ EM C + T I +LC+ ++A E M G +T+ L +
Sbjct: 373 KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG 432
Query: 364 FKKRGMTALAQKLCNVMSSVPRSM 387
F +G A +L M P ++
Sbjct: 433 FCVQGHIDSALELFRSMPCKPNTI 456
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 137/281 (48%), Gaps = 7/281 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ +LC++GR A+ + + S +P V YN L+ G+ R ++ A R M
Sbjct: 82 LIRNLCRRGRTSDAARVL---RAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP 138
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
V P+ TY L+ C RV A+ L+ +M + G +PN + Y +++ + FE
Sbjct: 139 ---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFE 195
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ +++ P +VTY ++ G C+ G ++ A ++L + S GF P +Y
Sbjct: 196 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLL 255
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ + +D L+ +M+E P+ +T+ +L++ C+ ++ AIQV ++M GC
Sbjct: 256 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCA 315
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ ++I+ +C+ + D+A DM G P +++
Sbjct: 316 TNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISY 356
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 153/322 (47%), Gaps = 9/322 (2%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M KN F++L+ C+ G V+ A + + E A + NI++N +
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTE--HGCATNTTLCNIVINSICKQG 332
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V DA + +M P+ ++Y T+++G CR R D A L+ EM + PN + +N
Sbjct: 333 RVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFN 392
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKILKMMI 241
T I L + G E+ ++E+ + E G T+ VTY +LV G+C G ++ A ++ + M
Sbjct: 393 TFICILCQKGLIEQAIMLIEQ--MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP 450
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+ P+ TY +++ A L +M+ P+ +T+++L+ C++ L+
Sbjct: 451 CK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLE 507
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI++ ++M GC +L T L+ + + ++A ++ +G+ P +TF +
Sbjct: 508 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567
Query: 362 DEFKKRGMTALAQKLCNVMSSV 383
K A +L +V+ +
Sbjct: 568 GILSKEDRIEEAVQLFHVVQDI 589
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 156/359 (43%), Gaps = 18/359 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIW--TFEF 58
+I + K D A+ LL D PD +S T + G+ A W E
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVL--------KGLCRAERWDDAKEL 375
Query: 59 ANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
N +MV+N F + LC++G ++ A + E V YN L+N
Sbjct: 376 LN--EMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSE--HGCTVGVVTYNALVN 431
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ ++ A + R PN +TY TL+ G C R+D A LV EM + P
Sbjct: 432 GFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPP 488
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + +N ++ + G EE ++E+ + P ++TY +L+ G K E A ++L
Sbjct: 489 NVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELL 548
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
++S+G P T++ SK ++E+A+ L+ + + G P + Y+ +L LCK
Sbjct: 549 HGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKR 608
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
++D AI M GC + T +LI L EA + RG++ LT
Sbjct: 609 CEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLT 667
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 121/277 (43%), Gaps = 3/277 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V + L+ R DA R +V Y TLV GYCR +D A R
Sbjct: 73 APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ M + P+A Y +I L + GR + +++ L P +VTYT L++ C
Sbjct: 133 LIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ E A +L M ++G P+ TYN + G+V+DA L ++ G+ PD +
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y LLK LC + D ++ EM + C + T MLI CR + A E M
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G + + + K+G A KL N M S
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 141/287 (49%), Gaps = 1/287 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ LL C + R + A E H + +S P V Y ++NG+F V A +L
Sbjct: 168 YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFL 227
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + PNVVTY T+++G C+ + VDRA + ++M +G++P+ YN +I G + G
Sbjct: 228 EMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+++EV M+E P TY SL+ C G A MI +G P+ Y
Sbjct: 288 KWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYG 347
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
++ G + + +L M+E+G +PD ++I+ K+ +D A+ + +MK +
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D+ LI LC++ + D+A +F M+ G+ P+ F L
Sbjct: 408 GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 160/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I+ YA+ M++ A+ F N + F L+D+LCK GRV A F
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIF----NKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ AP + V+N L+ G + A+ F+ EM + + P+VV + T++ C
Sbjct: 437 NQM--MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLC 494
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+V +A RL+ M + G P+ I Y T+I G GR +E + ++ L P
Sbjct: 495 TKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEW 554
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC+AG ++ A + + M+ G P TY+ + +A LY M
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM 614
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG + Y+I+L L K + +D A ++ + + + +++ T ++I L + +
Sbjct: 615 ITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRN 674
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLVP T+ + + + G
Sbjct: 675 EDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 160/347 (46%), Gaps = 6/347 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ ILI YA G A+ NL + +F I+ + K+ + A F
Sbjct: 346 YGILIHGYATKG----ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+K K+ Q +P V + L++ + V DA + +M E V PN+ + +LV G C
Sbjct: 402 NKMKQ--QGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + ++A EM +GI P+ + +NT++ L G+ + +++ P ++
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVI 519
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+YT+L+ G+C G ++ A+K L +M+S G P TYN + + G+++DA ++R+M
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ +G TP +TY +L L + A ++ M G ++ ++++ L +
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCV 639
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+ + + TF + K G A L +SS
Sbjct: 640 DEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 4/225 (1%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VTP++ TY L+ +CR+ R++ + K G N IV N ++ GL +A R E
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 200 G-MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYF 255
+++R P +V+Y +L+KG+C E A ++L MM R P+ +Y
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F G+V+ A NL+ +M++ G P+ +TY ++ LCK +D A V ++M +G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D DT LIH + K+ E E+M GL P T+ L
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 148/341 (43%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ F LI + G V+ A+ F N + N +F L+ LC +
Sbjct: 411 PDVVN---FGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI----FVFNSLVYGLCTVDK 463
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E++ + L+Q P V +N +L V A+R M + P+V++Y
Sbjct: 464 WEKAKEFYFEM--LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISY 521
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C + R+D A + + M G++P+ YNT++ G AGR ++ G+ L
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY++++ G A ++ MI+ G + YN SK V++
Sbjct: 582 NGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDE 641
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L++ + + + T++I++ L K + + A+ + + G D+ T ++
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAE 701
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
L +E F M + G P+ L RG
Sbjct: 702 NLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRG 742
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 159/410 (38%), Gaps = 47/410 (11%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNF 68
+ D A+ L L+ + P+ V T+ +I +A +V+ A F+ M+ K
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVV---TYTTVIDGLCKAQVVDRAEGVFQ-----QMIDKGV 269
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+ L+ G+ K + P Y LLN + ++A
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA--HGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEG----------------------------------- 153
F+ M ++ + PNV YG L+ G
Sbjct: 328 RFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y + +D A+ + +M+++G+ P+ + + +ID L + GR ++ + + P
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ + SLV G C E A + M+++G P +N G+V A L
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G PD ++Y L+ C ++D A + M G D T L+H CR
Sbjct: 508 LMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKR-LNDEFKKRGMTALAQKLCNVMSS 382
+ D+A F +M+R G+ P +T+ L+ F R + + N+++S
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 9/219 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ L+ Y RAG ++ A F +M++N G + +L L R A E
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFR-----EMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + W + +YNI+LNG ++ V +A + + + ++ + T+ ++
Sbjct: 610 LYLNMITSGKQW--NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+ R + A+ L + G+ P+ Y + + L+E G EE + P
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGF-LPSPTT 251
+LV+ GD+ A L + + F L + TT
Sbjct: 728 SRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTT 766
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 164/328 (50%), Gaps = 9/328 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF +L+ + G + +A + F E+ +S PTV +N L++G R++++ + +
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFD---EMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYK 244
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM V P+V TYG L++G+CR R++ A+++ EMR G+ PNA+V+ T+ID + G
Sbjct: 245 EMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEG 304
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + V P +V Y +LV G C+A +L+ A I++ M + G P TY
Sbjct: 305 NVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYT 364
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K GK++ AM++ +KM E + D +TY L+ L K + A +V +EM
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ D T TM+I CR ++M +G P +T+ + + K G A
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNA 484
Query: 374 QKLCNVMSSVPRSME------LLDSRCK 395
L + M ++ S + LLD +CK
Sbjct: 485 DMLLHAMLNIGVSPDDITYNILLDGQCK 512
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 170/350 (48%), Gaps = 9/350 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +L+R + R G + +A F+ +M ++ F L+ +C+ + A +
Sbjct: 189 FNVLMRDFVRLGELVSARKVFD-----EMRRSVQPTVVTFNTLISGMCRARDLDAVDGLY 243
Query: 96 HKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
KE+ D P V Y L+ G+ R+ +++A + + EMR V PN V + TL++ +
Sbjct: 244 ---KEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAH 300
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ V+ + L ++MR G+ P+ + YN +++GL A + ++E P
Sbjct: 301 CKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDK 360
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT+L+ G CK G L+ A I + M + TY SK G+ DA + R+
Sbjct: 361 VTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE 420
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E+ PD TY +++ C++ + ++ KEM+ +G + T ++++ LC++ +
Sbjct: 421 MMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQ 480
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
A M+ G+ P +T+ L D K G A +++L + VP
Sbjct: 481 MKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMVP 530
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 1/268 (0%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
LD AP R++N+L+ + R + A + + EMR+ +V P VVT+ TL+ G CR R +
Sbjct: 178 LDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDL 236
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D L KEM G++P+ Y +I G GR E M P V +T+L
Sbjct: 237 DAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTL 296
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ +CK G++ + + M RG +P YN + ++ A ++ +M +G
Sbjct: 297 IDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGL 356
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD++TY L+ CK+ KLD+A+ + ++M + +D T T LI L + + +A
Sbjct: 357 KPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAER 416
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+M+ L P T+ + D F ++G
Sbjct: 417 VLREMMEAALEPDNTTYTMVIDAFCRKG 444
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 2/313 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ SLC R + A + + + +P V +N +++G+F+ V A E
Sbjct: 230 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINE 289
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V P+VVTY ++V+ C+ R +D+A ++++M +G+EP+ + Y +I G +G
Sbjct: 290 MVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGH 349
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E + M + P +VT+ S + CK G + A +I + M ++G +P +Y+
Sbjct: 350 WKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSI 409
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G+ D NL+ M + G + ++IL+ K +D A+ V EM+ +G
Sbjct: 410 LLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQG 469
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + LI CRM + +A +F MI GL P+ + + L F G A+
Sbjct: 470 VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAK 529
Query: 375 KLCNVMSS--VPR 385
+L + M S +PR
Sbjct: 530 ELVSEMMSKGIPR 542
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 163/346 (47%), Gaps = 7/346 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI +A+ GM++ A+ F + + L+ + C+ GR+ A E F
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQG----QGVRPDVVTYSTLISAFCRMGRLADAMEKF 497
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT-PNVVTYGTLVEGY 154
+ + P VY+ L++G+ ++ A+ EM + + PN+V + +++
Sbjct: 498 SQMISI--GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSL 555
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C RV A + + G P + +N++IDG G+ E+ G+++ + P +
Sbjct: 556 CNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 615
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +LV GYCK+G ++ + + M+ + P+ TY+ G+ A ++ +
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHE 675
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI+SG D TY ILLK LC+ D D AI + ++ C D+ +I+ L ++ +
Sbjct: 676 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRR 735
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+EA+ F + GLVP+ T+ + K G A + + M
Sbjct: 736 REEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSM 781
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 26/320 (8%)
Query: 86 GRVKAAS----EYFHKRKELDQSWAPTVRVYNILLNGWFRS-KNVKDA------------ 128
RV+A + + H EL + P V+N LNG+ + D+
Sbjct: 81 ARVRAGTFSTDDAHHLFDELLRQGTP---VHNPALNGFLAALARAPDSVSCSNGPALVLA 137
Query: 129 --ERFWLEMRKENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
R E V P +V TYG L++ CR RR D + + G+ I NT
Sbjct: 138 LFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTF 197
Query: 186 IDGLVEAGRFEE-VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+ L A R +E V ++ R P ++Y +++K C + A +++ M G
Sbjct: 198 LKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 257
Query: 245 FLPSP--TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
SP ++N F K G+V A NL +M++ G PD +TY+ ++ LCK +D
Sbjct: 258 GRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDK 317
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A V ++M +G + D T T +IH + E++ F M +GL+P +TF
Sbjct: 318 AELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMS 377
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K G + A+++ M++
Sbjct: 378 SLCKHGRSKDAEEIFQYMTT 397
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 6/234 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y G +E A + ++ + + L+ CK G++
Sbjct: 582 TFNSLIDGYCLVGKMEKAFGVLDAMVSV----GIEPDVVTYNTLVSGYCKSGKIDDGLIL 637
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F R+ L + PT Y+I+L+G F + A++ + EM ++ TY L++G
Sbjct: 638 F--REMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGL 695
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR D AI L ++ + + + NTVI+ L + R EE + + P +
Sbjct: 696 CRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNV 755
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
TY ++ K G +E A + M G PS N R + G + A
Sbjct: 756 STYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 179/380 (47%), Gaps = 15/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +LAK ++F++ +L+++GG V ++ DTF I +R +A A + A+ FE
Sbjct: 135 MMSILAKTRQFETV-VSMLEEMGGKGV---LTMDTFSIAMRAFAAAKERKKAVAMFELMK 190
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N+ G LLDSL GR K E + L + P +R Y +LLNGW
Sbjct: 191 KY----NYKVGVETINHLLDSL---GRAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWC 243
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ KN+ +A W EM + P++V + ++EG R ++ AI+L M+ +G P+
Sbjct: 244 KVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVR 303
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I L + EE + + P YT L+ G+ ++ +LK M
Sbjct: 304 SYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEM 363
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P TYN + ++ +DA +Y+KM +SG P TY++++K +
Sbjct: 364 KEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNY 423
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ V EM +G D ++ T+LI L + EA E+M+ +G+ L + +
Sbjct: 424 EMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKF 483
Query: 361 NDEFKKRG----MTALAQKL 376
+ + G + LAQ+L
Sbjct: 484 GADLSRGGNPDILEELAQRL 503
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 35/258 (13%)
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI--------------------- 175
K+ + TY +++ + R+ + + +++EM +G+
Sbjct: 122 KQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAAAKERKK 181
Query: 176 -------------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+ N ++D L A +E + E L P + TYT L+
Sbjct: 182 AVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFEN-LKGRFTPNLRTYTVLLN 240
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G+CK +L A + MI +GF P +N + + DA+ L+ M G +P
Sbjct: 241 GWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSP 300
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +Y IL++ LC++ K++ A++ +EM GC D T LI + D
Sbjct: 301 DVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLL 360
Query: 343 EDMIRRGLVPHYLTFKRL 360
++M G P LT+ L
Sbjct: 361 KEMKEEGCPPDGLTYNAL 378
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 35/230 (15%)
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
K+G E ++ YN+++ L + +FE V M+E + + TM T++ ++ + A + +
Sbjct: 122 KQGFEHDSRTYNSMMSILAKTRQFETVVSMLEE-MGGKGVLTMDTFSIAMRAFAAAKERK 180
Query: 232 GASKILKMM------------------ISRG----------------FLPSPTTYNYFFR 257
A + ++M + R F P+ TY
Sbjct: 181 KAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLN 240
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K + +A +++ +MI+ G+ PD + ++I+L+ L + + AI++ MK +G
Sbjct: 241 GWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSP 300
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
D+ + T+LI LCR K +EA F++MI G P + L F R
Sbjct: 301 DVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNR 350
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 200/422 (47%), Gaps = 50/422 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDLWVLMIDSYGKAGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDS---------------------------------LCKQGR 87
L + + S +LF+++L LC G+
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLC--GK 165
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ A+ +F K + S P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 166 VETANRFFEDMKXREIS--PDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++GY + RVD A+ L++EM+ GI+PNAI Y+T++ GL A + E SG+++ +
Sbjct: 224 TTLIKGYVSVDRVDDALTLLEEMKGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVD 283
Query: 208 CEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + L+ G CKAG+L+ A+ +LK MI Y + K G E
Sbjct: 284 KYIAPKDNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYE 343
Query: 267 DAMNLYRKMIE--------SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
A+ L K+IE S + Y+ L++ LC + A + +++ G D
Sbjct: 344 KAIKLLDKLIEKDIVLRPQSSLHMEPSAYNPLVEYLCNNGQTAKAETLVRQLMKLGVQ-D 402
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
LI + D A + M+RR + ++ L + K+ A A+ +
Sbjct: 403 PTALNTLIRGHSQEGSPDSAFELLKIMLRRKIDSEKSSYDSLVQSYLKKSEPADAKAALD 462
Query: 379 VM 380
M
Sbjct: 463 SM 464
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 135/295 (45%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKIEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDRVDDALTLLEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ AS ++ +D+ AP ++ L++G
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEASGIL--KEMVDKYIAPKDNSIFLRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ N+ A M + +V YG L+E YC+ ++AI+L+ ++ ++ I
Sbjct: 302 CKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDIVLRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +++ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSSLHMEPSA--YNPLVEYLCNNGQTAKAETLVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R ++Y+ + + K + DA MIE+G+ PD
Sbjct: 418 SPDSAFELLKIMLRRKIDSEKSSYDSLVQSYLKKSEPADAKAALDSMIENGHLPD 472
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGSKKSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXREISPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEMKGF 249
Query: 349 GLVPHYLTFKRL 360
G+ P+ +T+ L
Sbjct: 250 GIKPNAITYSTL 261
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 200/399 (50%), Gaps = 27/399 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I++L +A + + A C+LLD G E +++ FV+LI Y +AG+V+ A+ F
Sbjct: 148 IIEILGRASKLNHARCILLDMPKKGVEWDEYM----FVVLIESYGKAGIVQEAVKIFNKM 203
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N L + ++ S +LF+++L ++GR A F+K L+ PT YNI+L G+
Sbjct: 204 NELGVERSIKSYDALFKVIL----RRGRYMMAKRVFNKM--LNDGIQPTRHTYNIMLWGF 257
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F S ++ A RF+ +M+ ++P+VVTY T++ G+ R ++++ A +L EM+ + I P
Sbjct: 258 FLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTV 317
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y T+I G V R ++ ++E P + TY++L+ G C A + A IL
Sbjct: 318 ISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIE 377
Query: 240 MISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M++R P + F R S K G + A ++ M+ + Y +L++ CK
Sbjct: 378 MVARHLAPKDNS--IFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCK 435
Query: 297 EDKLDLAIQ-----VSKEMKCR---GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ D A++ + KE+ R +I+ + +I LC + +A F ++++
Sbjct: 436 AEEYDRAVKYLDKLIEKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKK 495
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPR 385
G V L F L K G A ++ +M VPR
Sbjct: 496 G-VQDPLAFNNLICGHAKEGYPDSAFEIFKIMGKRGVPR 533
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 168/392 (42%), Gaps = 32/392 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A L ++ G + P +S + +I+ Y V+ + E
Sbjct: 288 MINGFYRFKKMEEAEKLFVEMKGKNIAPTVIS---YTTMIKGYVAVDRVDDGLRLLEEMK 344
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ ++ N + + LL LC ++ A + + + + AP ++ LL+
Sbjct: 345 SFNIKPNVHT----YSTLLPGLCDAWKMTEAKDILIEM--VARHLAPKDNSIFLRLLSCQ 398
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR-LVKEMRKE----- 173
++ +++ AE M + ++ YG L+E +C+ DRA++ L K + KE
Sbjct: 399 CKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYLDKLIEKEIILRP 458
Query: 174 ----GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL---VCEPGPTMVTYTSLVKGYCK 226
IE NA YN +I L G+ + + + V +P + + +L+ G+ K
Sbjct: 459 QSTLEIESNA--YNPMIQYLCSHGQTGKAEIFFRQLMKKGVQDP----LAFNNLICGHAK 512
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A +I K+M RG Y + + G+ DA M+E G+ PD
Sbjct: 513 EGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSV 572
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ +++ L ++ ++ A +V K M +G ++D ++ L +EA E ++
Sbjct: 573 FRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIELLM 632
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ G ++ F L ++G T A KL +
Sbjct: 633 QSGF---HVNFDDLLSVLSEKGKTIAALKLLD 661
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 42/279 (15%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L ++N + A +F W+E R + T+ ++E R +++ A ++
Sbjct: 112 VYNVL----HAARNSEHALQFFRWVE-RAGLFKNDRDTHMKIIEILGRASKLNHARCILL 166
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF-----------------LVCEPG 211
+M K+G+E + ++ +I+ +AG +E + + ++ G
Sbjct: 167 DMPKKGVEWDEYMFVVLIESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRG 226
Query: 212 ------------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
PT TY ++ G+ + LE A + M +RG P TYN
Sbjct: 227 RYMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYN 286
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F +F K+E+A L+ +M P ++Y ++K D++D +++ +EMK
Sbjct: 287 TMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSF 346
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
++ T + L+ LC +K EA +M+ R L P
Sbjct: 347 NIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAP 385
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 7/238 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWL 133
F L+ K+G +A E F K + + P Y +++ + R DA+
Sbjct: 503 FNNLICGHAKEGYPDSAFEIF---KIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALD 559
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M ++ P+ + +++E RV A R++K M ++G++ N + +++ L+ G
Sbjct: 560 GMLEDGHVPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRG 619
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
EE G +E L+ + G V + L+ + G A K+L + R F +Y+
Sbjct: 620 HVEEALGRIE--LLMQSG-FHVNFDDLLSVLSEKGKTIAALKLLDFALERDFNLDFKSYD 676
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
GK +A ++ K+++ G D + L+K L +E A +S+ +K
Sbjct: 677 KVLDALLAAGKTLNAYSILCKIMQKGGVSDWSSSKDLIKSLNQEGNTKQADILSRMIK 734
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 183/396 (46%), Gaps = 45/396 (11%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE-FANNLD 63
L KA+EF LL+ K+ + V TF ILI + ++ A+ FE +
Sbjct: 162 LGKAREF-GKMNLLMRKMKDMNIQPTVI--TFGILINHLCKFRRIDDALEVFEKMKGEKE 218
Query: 64 MVKNFDSGAS-LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
K F + + ++ L+D LCK GR + A K + DQ APT +N L+NG+ RS
Sbjct: 219 ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRS-DQC-APTTATFNCLINGYCRS 276
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV---------------------- 160
++ A + + EM + PNV+T TLV+G C+ R+
Sbjct: 277 GEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTY 336
Query: 161 -------------DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++A+ + EM K+G P+A+VY T+I GL +AGR ++ S ++ +
Sbjct: 337 TVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKE 396
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V Y L+ +CK L+ A + L M G P TYN YFSK G +
Sbjct: 397 AGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKL 456
Query: 268 AMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS--TM 324
A +KM E G +P TY L+ C + +D AI++ KEM + +T +
Sbjct: 457 AHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNI 516
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LI LC+ + + A + +DM RG++P+ T+ +
Sbjct: 517 LIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSI 552
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 161/371 (43%), Gaps = 16/371 (4%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
L+ K G H + PD ++ LI + R+G A W +NL M+ A
Sbjct: 104 LVSKFGKHNIFPDTIA---LTQLISKLCRSGNTNLA-WNI--LDNLMMLNGLKDAAPC-N 156
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
LL L K + K K D + PTV + IL+N + + + DA + +M+
Sbjct: 157 ALLTGLGKAREFGKMNLLMRKMK--DMNIQPTVITFGILINHLCKFRRIDDALEVFEKMK 214
Query: 137 KEN------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
E V P+ + Y TL++G C++ R + A+ L+ +MR + P +N +I+G
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYC 274
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+G E + + P ++T +LV G CK + A + ++M +G +
Sbjct: 275 RSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNV 334
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY F F + AM +M + G PD + Y+ L+ L + +LD A V ++
Sbjct: 335 TYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKL 394
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
K G +D +LI C+ K D A +M G+ P +T+ L F K G
Sbjct: 395 KEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNF 454
Query: 371 ALAQKLCNVMS 381
LA K M+
Sbjct: 455 KLAHKFMKKMT 465
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 151/367 (41%), Gaps = 47/367 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + A CL+ P + TF LI Y R+G +E A F
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAP---TTATFNCLINGYCRSGEIEVAHKLFNEME 290
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + N + L+D +CK R+ A E+F ++ + Y + +N +
Sbjct: 291 NAQIEPNVIT----LNTLVDGMCKHNRISTAVEFFRVMQQ--KGLKGNNVTYTVFINAFC 344
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG--------------------------- 153
N+ A F EM K+ P+ V Y TL+ G
Sbjct: 345 NVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRV 404
Query: 154 --------YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+C+ ++DRA + EM G++P+++ YNT+I + G F+ M++
Sbjct: 405 CYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKM 464
Query: 206 LVCEP-GPTMVTYTSLVKGYCKAGDLEGASKILKMM--ISRGFLPSPTTYNYFFRYFSKF 262
E PT+ TY +L+ YC +++ A KI K M ++ P+ YN K
Sbjct: 465 TEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQ 524
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+V A++L M G P+ TY+ + K L ++ LD A ++ M + C+ D T
Sbjct: 525 TQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITM 584
Query: 323 TMLIHLL 329
+L L
Sbjct: 585 EILTEWL 591
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 155/426 (36%), Gaps = 88/426 (20%)
Query: 37 VILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH 96
V L+RR R GMV+ A+ F ++ KN + + +LL K GRV A
Sbjct: 10 VHLLRRLGRIGMVDEALAAFSTLDS--HAKNTNVRNEIINLLL----KSGRVDNAMNVLD 63
Query: 97 KRKELDQSWAPTVRVYNILLNGWFR----SKNVKDAERFWL--EMRKENVTPNVVTYGTL 150
+ + + P + I+ N + VK+ E L + K N+ P+ + L
Sbjct: 64 EMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQL 123
Query: 151 VEGYCR-----------------------------------LRRVDRAIRLVKEMRKEGI 175
+ CR R + L+++M+ I
Sbjct: 124 ISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNI 183
Query: 176 EPNAIVYNTVI-----------------------------------------DGLVEAGR 194
+P I + +I DGL + GR
Sbjct: 184 QPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGR 243
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE +M + + PT T+ L+ GYC++G++E A K+ M + P+ T N
Sbjct: 244 QEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNT 303
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++ A+ +R M + G + +TY + + C + ++ A++ EM G
Sbjct: 304 LVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDG 363
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D LI L + + D+AS+ + G + + L EF K+ AQ
Sbjct: 364 CFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQ 423
Query: 375 KLCNVM 380
+ N M
Sbjct: 424 EWLNEM 429
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ K G K A ++ K E ++ +PTV Y L++ + + N+ +A + + E
Sbjct: 441 YNTLISYFSKIGNFKLAHKFMKKMTE-EEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKE 499
Query: 135 MRK--ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M V PN V Y L++ C+ +V+ A+ L+ +M+ G+ PN YN++ L +
Sbjct: 500 MNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDK 559
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++ +M+R + P +T L + G++ K + ++R
Sbjct: 560 NWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQGCMNR 610
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 159 RVDRAIRLVKEM--RKEGIEPN----AIVYNTV--IDGLVEAGRFEEVSGMMERFLVCEP 210
RVD A+ ++ EM + PN IV+N + IDGL + +E++G++ +F
Sbjct: 54 RVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNI 113
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK---FGKVED 267
P + T L+ C++G+ A IL ++ L N K FGK
Sbjct: 114 FPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGK--- 170
Query: 268 AMNLY-RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI------DLD 320
MNL RKM + P +T+ IL+ LCK ++D A++V ++MK + D
Sbjct: 171 -MNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTI 229
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LI LC++ + +EA M P TF L + + + G +A KL N M
Sbjct: 230 MYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM 289
Query: 381 SSV---PRSM---ELLDSRCK 395
+ P + L+D CK
Sbjct: 290 ENAQIEPNVITLNTLVDGMCK 310
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 158/308 (51%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC +GRV A E + E+ PT+ N L+NG + V DA
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHK--PTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VTYG +++ C+ + A+ L+++M + I+ +A+ Y+ +IDGL + G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + ++ YT+L++G+C AG + +K+L+ MI R P ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+ +A L+++MI+ G +PD +TY L+ CKE++LD A + M +G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C ++ T +LI+ C+ D+ F M RG+V +T+ L F + G +A+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 375 KLCNVMSS 382
+L M S
Sbjct: 443 ELFQEMVS 450
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D LCK G + A F++ + + + + +Y L+ G+ + D + +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEI--KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K +TP+VV + L++ + + ++ A L KEM + GI P+ + Y ++IDG + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + M++ + GP + T+ L+ GYCKA ++ ++ + M RG + TYN
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F + GK+E A L+++M+ PD ++Y ILL LC + + A+++ ++++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++D+ ++IH +C K D+A F + +G+ P T+ + K+G + A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 375 KL 376
L
Sbjct: 548 LL 549
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 173/369 (46%), Gaps = 22/369 (5%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++ +K F + ++ L+ C GR ++
Sbjct: 250 YSIIIDGLCKDGSLDNA---FNLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + P V ++ L++ + + +++AE EM + ++P+ VTY +L++G+C
Sbjct: 306 --RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ ++D+A ++ M +G PN +N +I+G +A ++ + + + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L++G+C+ G LE A ++ + M+SR P +Y G+ E A+ ++ K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y+I++ +C K+D A + + +G D+ T ++I LC+
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 336 DEASAEFEDMIRRGLVPHYLTFK----------------RLNDEFKKRGMTALAQKLCNV 379
EA F M G P+ T+ +L +E K+ G + A L
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFA 603
Query: 380 MSSVPRSME 388
+S++ R ++
Sbjct: 604 LSTLARMLK 612
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P ++ + L R ++ D + L K+M +GI N + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ + M + + P VT+++L+ G C G + A +++ M+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI------------- 293
P+ T N GKV DA+ L +M+E+G+ P+ +TY +LK+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 294 ----------------------LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
LCK+ LD A + EM+ +G D+ T LI C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++D+ + DMI+R + P + F L D F K G A++L
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 30/321 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ILI Y +A +++ + F + ++ + + L+ C+ G+++ A E
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMS----LRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + + P + Y ILL+G + + A + ++ K + ++ Y ++ G
Sbjct: 445 FQEM--VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C +VD A L + +G++P+ YN +I GL + G E + + P
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 215 VTYTSLVKGYCKAGDLEGASKI----------------------LKMMISRGFLPSPTTY 252
TY L++ + GD ++K+ L M+ G P T+
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTF 622
Query: 253 NYFFRYF--SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
R F + V DA L++ M GY P+ +TY+ ++K L + + V +M
Sbjct: 623 TTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQM 682
Query: 311 KCRGCDIDLDTSTMLIHLLCR 331
RGC + T + I LC+
Sbjct: 683 FERGCQPNAVTKSTFISGLCK 703
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF----RSKNVKDAE- 129
+ I++ LCK+G + A F K +E +P YNIL+ +K+ K E
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEE--DGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 130 -------------RFWLE----MRKENVTPNVVTYGTLVEGYC--RLRRVDRAIRLVKEM 170
RF L M K P+V T+ TL+ +C V A L K M
Sbjct: 588 IKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNM 647
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ G +PN + YNTVI GL+ +V G++++ P VT ++ + G CK DL
Sbjct: 648 KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ-DL 706
Query: 231 EGASKIL 237
G++ +L
Sbjct: 707 HGSAILL 713
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 6/193 (3%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P ++ ++ L + + + K M +G + T + + K+ A
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+I+ GY PD +T+ L+ LC E ++ A+++ M G L T L++ L
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME- 388
C K +A + M+ G P+ +T+ + K G TALA +L M ++
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA 247
Query: 389 -----LLDSRCKD 396
++D CKD
Sbjct: 248 VKYSIIIDGLCKD 260
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA++L+++M S P + + L ++ + + DL + + K+M+ +G +L T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++I+ CR K A + +I+ G P +TF L + G + A +L + M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 39 LIRRYARAGM-VEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLC--KQGRVKAASEY 94
LI R G V+A+ F + M+K + F LL C + V A
Sbjct: 584 LIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTL 643
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K + + P V YN ++ G + +M + PN VT T + G
Sbjct: 644 FKNMKAM--GYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701
Query: 155 CRLRRVDRAIRLVKEMRKE 173
C+ AI L+++M +
Sbjct: 702 CKQDLHGSAILLLRKMEND 720
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 176/350 (50%), Gaps = 11/350 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFA 59
++ L K + D A LL + + PD V T+ ILI + G V+ AI + E
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLV---TYSILIHGLCKQGKVQQAIQLYKEMC 388
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N +F +L LC++G + A YF + + P V +YNI+++G+
Sbjct: 389 FNRIFPNSFAHSG-----ILKGLCEKGMLSDARMYFDSL--IMSNLRPDVTLYNIMIDGY 441
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +V++A R + +R + +TP++VT+ +L+ G+C+ R+V A RL++ ++ G+EP+A
Sbjct: 442 VKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSA 501
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y T+++ E G ++ ++ + + PT+VTYT ++KG CK LE + ++L+
Sbjct: 502 VTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M ++G P TYN + F K + A L M+ P TY++L+ LC+
Sbjct: 562 MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD 621
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ A +V ++ R ++ T +I C A F M+ +G
Sbjct: 622 VEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ C+ G ++ A +R L + V +Y++LL+ + V +A + E
Sbjct: 294 YTVLICGHCQMGNIEEALRL--RRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYE 351
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N+ P++VTY L+ G C+ +V +AI+L KEM I PN+ ++ ++ GL E G
Sbjct: 352 MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGM 411
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + ++ P + Y ++ GY K GD+E A ++ K + + PS T+N
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K KV +A L + G P +TY L+ C+E ++ ++ EM +
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK-----RGM 369
+ + T T++I LC+ K +E+ EDM +GL P +T+ + F K +
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591
Query: 370 TALAQKLCNVMSSVPRSME-LLDSRCK 395
L L + + P + L+D C+
Sbjct: 592 ELLDDMLIHNLEPTPATYNVLIDGLCR 618
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 162/341 (47%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +LI + + G +E A+ +L + F L+ +LL SLCK+G+
Sbjct: 289 PDLV---TYTVLICGHCQMGNIEEAL---RLRRDL-LSSGFQLNVILYSVLLSSLCKRGQ 341
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + ++ + + P + Y+IL++G + V+ A + + EM + PN +
Sbjct: 342 VDEALQLLYEMEA--NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAH 399
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+++G C + A + + P+ +YN +IDG V+ G EE + +R
Sbjct: 400 SGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRD 459
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P++VT+ SL+ G+CK + A ++L+ + G PS TY + + G +
Sbjct: 460 KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINK 519
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L +M P +TY +++K LCK+ KL+ ++Q+ ++M+ +G D T +I
Sbjct: 520 LHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQ 579
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ +A +DM+ L P T+ L D + G
Sbjct: 580 CFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYG 620
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 1/274 (0%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D + R +I+++G +DA F + + P+VV++ T++ YC+L D
Sbjct: 143 DSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLAD 202
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A M K GI P+ YN +I GL+ AG EE + P MVTY +
Sbjct: 203 VAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVA 262
Query: 222 KGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
KG+ G + GA +I+ KM+ G P TY + G +E+A+ L R ++ SG+
Sbjct: 263 KGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+ + Y +LL LCK ++D A+Q+ EM+ DL T ++LIH LC+ K +A
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+++M + P+ + ++GM + A+
Sbjct: 383 LYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 4/267 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V + +L S+ V DA ++M+++N+ P++ TY +L+ LR D + ++
Sbjct: 85 VLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYN---LRHTDIMWDVYNDI 141
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ G +A + ++DGL RF + + + E P++V++ +++ YCK G
Sbjct: 142 KDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLA 201
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A MM+ G LP +YN G +E+A+ L M + G PD +TY I+
Sbjct: 202 DVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIV 261
Query: 291 LKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
K + A ++ ++M G DL T T+LI C+M +EA D++ G
Sbjct: 262 AKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSG 321
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ + + L KRG A +L
Sbjct: 322 FQLNVILYSVLLSSLCKRGQVDEALQL 348
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 100/254 (39%), Gaps = 37/254 (14%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ + A + L+++ C++G + E + D PTV Y +++ G + +
Sbjct: 494 LHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD--IEPTVVTYTVVIKGLCKQRK 551
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
++++ + +MR + + P+ +TY T+++ +C+ + + +A L+ +M +EP YN
Sbjct: 552 LEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNV 611
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK---------------------- 222
+IDGL G E+ ++ T V YT+++K
Sbjct: 612 LIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671
Query: 223 -------------GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
CK + A +M+S G P + F + G V
Sbjct: 672 FEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVF 731
Query: 270 NLYRKMIESGYTPD 283
L MI+ G D
Sbjct: 732 ELLAVMIKFGLLHD 745
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 162/330 (49%), Gaps = 13/330 (3%)
Query: 62 LDMVKNF-DSGASL----FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+DM + F +SG + + IL D+LCK G+V A + K + ++ Y L+
Sbjct: 385 VDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSM--QLDVDMKHYTTLI 442
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG+F +A+ + EM + P+VV Y L G+ R R A+ L+ M +G+E
Sbjct: 443 NGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVE 502
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG------DL 230
PN+ + +I+GL AG+ EE ++ YT+LV GYC+A +L
Sbjct: 503 PNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHEL 562
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A +L+ M+ PS Y+ F G +E A L+ I +G+TPD +TY I+
Sbjct: 563 KEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIM 622
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CK + L A ++ K+MK RG D T T++I+ C+M EA F+DM RG+
Sbjct: 623 INGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGI 682
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P + + + G T +A +L N M
Sbjct: 683 KPDVIAYTVIIKGLLNSGHTEIAFQLYNEM 712
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 171/427 (40%), Gaps = 64/427 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E D A CL + ++ T+ I+I+ + G E + F+
Sbjct: 196 LINRLVKHDEVDMALCLF---VRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMK 252
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVK---AASEYFHKRKELDQSWAPTVRVYNILLN 117
+ D + + ++ LCK R A + + R +A Y ++
Sbjct: 253 EAGV----DDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYA-----YTAVIR 303
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ + +AE +LEM K+ + P+V Y LV GYC R D+A+ + K M GI+
Sbjct: 304 GFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKT 363
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERF-----------------LVCEPGPT------- 213
N ++++ ++ L E GR EV M E F +C+ G
Sbjct: 364 NCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGML 423
Query: 214 -----------MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY----FFRY 258
M YT+L+ GY G A + K M RGF P YN FFR
Sbjct: 424 DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRN 483
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ F +AM+L M G P+ T+ I+++ LC K++ A + +K +I
Sbjct: 484 RTDF----EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEIS 539
Query: 319 LDTSTMLIHLLC------RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
++ T L++ C + ++ EA M+ + P + + ++ G
Sbjct: 540 VEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEG 599
Query: 373 AQKLCNV 379
A L N+
Sbjct: 600 AHTLFNL 606
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 147/337 (43%), Gaps = 12/337 (3%)
Query: 49 VEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT 108
VEA + + N+ ++ N S F L++ L K V A F + K +
Sbjct: 171 VEAIDFLLQTRKNVVILPNILS----FNFLINRLVKHDEVDMALCLFVRFKSFGLIFNE- 225
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
Y I++ + + ++ R + EM++ V + Y T +EG C+ R D +++
Sbjct: 226 -YTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQ 284
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYC 225
+ R + Y VI G + +E + FL E P + Y +LV GYC
Sbjct: 285 DYRTRNAHVHKYAYTAVIRGFCNETKLDEAESV---FLEMEKQGLVPDVYVYCALVHGYC 341
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ + + A + K MISRG + ++ + G+ + ++++ + ESG DR
Sbjct: 342 NSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRK 401
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
Y+IL LCK K+D A+ + E+K D+D+ T LI+ K EA + F++M
Sbjct: 402 AYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEM 461
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
RG P + + L F + A L N M S
Sbjct: 462 EERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMES 498
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 116 LNGWFR---SKNV-KDAERFWLEMRKENVT-PNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
NG+ + S+N+ +A F L+ RK V PN++++ L+ + VD A+ L
Sbjct: 157 FNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRF 216
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ G+ N Y VI L + G +E V + + Y + ++G CK
Sbjct: 217 KSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRS 276
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ +L+ +R Y R F K+++A +++ +M + G PD Y L
Sbjct: 277 DLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCAL 336
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C D A+ V K M RG + + ++H L M + E FE+ GL
Sbjct: 337 VHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGL 396
Query: 351 VPHYLTFKRLNDEFKKRG 368
+ L D K G
Sbjct: 397 FIDRKAYNILFDALCKLG 414
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 161/350 (46%), Gaps = 10/350 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
P+ ++ F LI + G ++ A E +MV+N + L+D LCK+G
Sbjct: 285 PNLIN---FTSLIDGLCKKGSIKQAFEMLE-----EMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F K D ++ P V Y ++ G+ + + AE + M+++ + PNV T
Sbjct: 337 WTEKAFRLFLKLVRSD-TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G+C+ RA L+ M EG PN YN ID L + R E ++ +
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
C VTYT L++ CK D+ A M GF N F + K++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
++ L++ ++ G P + TY ++ CKE +DLA++ MK GC D T LI
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ DEA +E MI RGL P +T L E+ KR +A A L
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 53/341 (15%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ + DSL G ++ A E V +L + + +A +
Sbjct: 129 LYLVTADSLLANGNLQKAHE-----------------VMRCMLRNFSEIGRLNEAVGMVM 171
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+ + +TP+ +T ++E L ++ A + EM G+ P++ Y ++ G G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 194 RFEE----VSGMMERFLV-------------CEPG------------------PTMVTYT 218
+ +E ++GM++R + CE G P ++ +T
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL+ G CK G ++ A ++L+ M+ G+ P+ T+ K G E A L+ K++ S
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 279 -GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
Y P+ TY ++ CKEDKL+ A + MK +G +++T T LI+ C+ F
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
A M G +P+ T+ D K+ A +L N
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P Y +++ G FR +++A+R+ M + P+ T ++ C V+RAI
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++M G +PN I + ++IDGL + G ++ M+E + P + T+T+L+ G CK
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 227 AGDLEGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G E A ++ LK++ S + P+ TY + K K+ A L+ +M E G P+
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ CK A ++ M G ++ T I LC+ + EA
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 346 IRRGLVPHYLTFKRLNDE 363
GL +T+ L E
Sbjct: 455 FSCGLEADGVTYTILIQE 472
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ + + R++ A+ +V +M+ +G+ P++I N V++ VE G E + + V
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +Y +V G + G ++ A + L MI RGF+P T + G V A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+RKMI+ G+ P+ + + L+ LCK+ + A ++ +EM G ++ T T LI L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 330 C---------RMY---------------------------KFDEASAEFEDMIRRGLVPH 353
C R++ K + A F M +GL P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVM 380
T+ L + K G A +L N+M
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLM 419
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ CKQ + A +F + + + +R+ NIL+ + R K +K++ER +
Sbjct: 466 YTILIQEQCKQNDINQALAFFCRMNK--TGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + P TY +++ YC+ +D A++ M++ G P++ Y ++I GL +
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P VT +L YCK D A +L+ + + ++ + T
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT--- 640
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
R KV A ++K++E + DR+T + K +L +++ +
Sbjct: 641 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 696
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 182/372 (48%), Gaps = 17/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L +A D +L+D++ H + F T+ IL R G E+ FA
Sbjct: 92 LLSGLCRAGRMDETR-VLMDEMASHSM--FPDGFTYSILFDGLTRTG--ESRTMLSLFAE 146
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L K GA ILL+ LCK G+V A + + PT +YN L+NG+
Sbjct: 147 SLK--KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML--VHTGLVPTTVIYNTLINGYC 202
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++++ A + +M+ ++ P+ +TY L+ G C+L V +A LV EM K G++P+
Sbjct: 203 QVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVE 262
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+NT+ID AG+ E+ +S M ++ + + ++++ S+VK +CK G + A I
Sbjct: 263 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD----VISFGSVVKAFCKNGKIPEAVAI 318
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI + P+ YN + + G E A L KM SG + +TY++LLK LC+
Sbjct: 319 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 378
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
++D A ++ ++ +G D+ + +I C D+A ++M + G+ P T
Sbjct: 379 SSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 438
Query: 357 FKRLNDEFKKRG 368
+ L G
Sbjct: 439 YHTLVSALASAG 450
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 11/351 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
G PD S + ++I R+G A+ F+ ++ +V N+ + + ++D
Sbjct: 10 GAPPPDAFS---YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWIT----YNTMIDGHV 62
Query: 84 KQGRVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
K G ++A F R + L P + YN+LL+G R+ + + EM ++ P
Sbjct: 63 KGGDLEAG---FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFP 119
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ TY L +G R + L E K+G+ A + +++GL + G+ + ++
Sbjct: 120 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL 179
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E + PT V Y +L+ GYC+ DL GA I + M SR P TYN K
Sbjct: 180 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 239
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
V A +L +M +SG P T++ L+ +L+ V +M+ +G D+ +
Sbjct: 240 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 299
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
++ C+ K EA A +DMI + + P+ + + D + + G T A
Sbjct: 300 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 350
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 6/252 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +TF LI Y AG +E F +++ K S F ++ + CK G++ A
Sbjct: 260 SVETFNTLIDAYGTAGQLEKC---FTVLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEA 315
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ + AP +VYN +++ + S + + A +M+ V+ ++VTY L+
Sbjct: 316 VAILDDM--IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G CR ++D A L+ +R +G+ P+ + YNT+I G ++ +++
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+ TY +LV AG + + + M+ + PS + Y + + +L
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 493
Query: 272 YRKMIESGYTPD 283
++M E G D
Sbjct: 494 KKEMSEKGIAFD 505
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L++ LCK V A + E+++S P+V +N L++ + + ++
Sbjct: 229 YNALINGLCKLEMVTKAEDLV---MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 285
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+++ + +V+++G++V+ +C+ ++ A+ ++ +M + + PNA VYN++ID +E+G
Sbjct: 286 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG 345
Query: 194 RFEEVSGMMERFL-----------------VCEPG------------------PTMVTYT 218
E+ ++E+ +C P +V+Y
Sbjct: 346 DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYN 405
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ C GD + A ++L+ M G P+ TY+ + G+V D LY++M+
Sbjct: 406 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 465
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
P Y I++ + + + KEM +G D
Sbjct: 466 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P +Y ++ G ++G A K+ M+ G +P+ TYN K G +E
Sbjct: 12 PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGF 71
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +M+ G P+ +TY++LL LC+ ++D + EM D T ++L L
Sbjct: 72 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
R + + F + +++G++ T L + K G A A+++ ++
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 182
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 173/362 (47%), Gaps = 40/362 (11%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L++ Y + G +++A+ F+ N + N + ++++ CK G + A E +++
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPN----NVTYAVIIEWCCKNGNMDKAYEIYNQM 390
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERF--------------------------- 131
K D S PTV N L+ G+ ++++ ++A +
Sbjct: 391 KNKDIS--PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGK 448
Query: 132 -------WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
W +M ++ V P+VV+Y ++ G+C+ +D A + EM ++G++PN I Y+
Sbjct: 449 MSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSV 508
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
++DG + G E G+ +R P+ T ++ G CKAG + LK ++ G
Sbjct: 509 LMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEG 568
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
F+P+ TYN F K G V A+ +Y +M + G +P+ TY L+ CK + +DLA+
Sbjct: 569 FIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLAL 628
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V EMK +G ++D+ LI CR AS ++ GL P+ + + + F
Sbjct: 629 KVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGF 688
Query: 365 KK 366
+K
Sbjct: 689 RK 690
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 174/382 (45%), Gaps = 48/382 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + + DSA + ++ + P+ + T+ +L+ Y + G E A +
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKGLKPNLI---TYSVLMDGYFKKGDTEYAFGLY---- 526
Query: 61 NLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
D ++ + S F I+++ LCK GR + + +K + + + PT YN +++G
Sbjct: 527 --DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRL--KKLVQEGFIPTCMTYNCIIDG 582
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +V A + EM K V+PNV TY L+ G+C+ +D A++++ EM+ +GIE +
Sbjct: 583 FVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
VY +ID G+C+ GD+ AS++L
Sbjct: 643 VTVYCALID-----------------------------------GFCRKGDMVNASQLLS 667
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ G P+ Y+ F K +E A++L+++MI G D Y L+ L KE
Sbjct: 668 ELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEG 727
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
KL A ++ EM +G DL T ++LIH LC + + A EDM R+ + P +
Sbjct: 728 KLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYN 787
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
L K G A +L N M
Sbjct: 788 TLITGHFKEGNLQEAFRLHNEM 809
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 14/270 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR----VKA 90
T+ +I + + G V +A+ + + + N + + L++ CK +K
Sbjct: 575 TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFT----YTNLINGFCKSNNMDLALKV 630
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E +K ELD V VY L++G+ R ++ +A + E+++ ++PN V Y ++
Sbjct: 631 MDEMKNKGIELD------VTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G+ +L+ ++ A+ L K M EGI + +Y T+I GL++ G+ S + L
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P ++TY+ L+ G C G LE A KIL+ M + P+ YN K G +++A
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKL 300
L+ +M++ G PD TY IL+ K+ L
Sbjct: 805 LHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 161/380 (42%), Gaps = 41/380 (10%)
Query: 29 DFVSKD-TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
DF S F L+ Y + + A+ F D+V ++ I L L K
Sbjct: 149 DFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCL----TVMNIFLSELVKNNM 204
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + ++K + ++++ R +++AE ++ E + + V + Y
Sbjct: 205 IREARDVYNKMAS--KGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAY 262
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++E C+ A+ L++EMR +G P+ +++ VI ++ G+ E + L
Sbjct: 263 SIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLS 322
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
C +V T+L+KGYCK GDL+ A ++ M G P+ TY + K G ++
Sbjct: 323 CGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDK 382
Query: 268 AMNLYRKMIESGYTP----------------------------------DRLTYHILLKI 293
A +Y +M +P + TY+ LL
Sbjct: 383 AYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSW 442
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LCKE K+ A + ++M +G + + +I C+ D A+ F +M+ +GL P+
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502
Query: 354 YLTFKRLNDEFKKRGMTALA 373
+T+ L D + K+G T A
Sbjct: 503 LITYSVLMDGYFKKGDTEYA 522
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%)
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+ L+ Y K + A +I + +P T N F K + +A ++Y KM
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G D T ++++ +E KL+ A +E K +G ++D +++I +C+
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
A +M +G VPH + F R+ K+G A K+ M S + M ++
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVV 330
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 98/234 (41%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ Y + +R++ A+ + ++ I P V N + LV+ E + +
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
T + +++ + G LE A + ++G Y+ K
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ L R+M + G+ P + + ++ + K+ K+ A++V EM G +++ +T L+
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C+ D A F+ M G+ P+ +T+ + + K G A ++ N M
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQM 390
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 148/286 (51%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL+ LC + R + A E H + P V Y+ ++NG+F+ ++ + E
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNE 113
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++PNVVTY +++ C+ + VD+A+ ++ M K G+ P+ + YN+++ G +G+
Sbjct: 114 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 173
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E +++ P +VTY SL+ CK G A KI M RG P TTY
Sbjct: 174 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGT 233
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ G + + L M+ +G P+ + IL+ K++K++ A+ V +M+ +G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + T +I +LC+ + ++A FE MI GL P + + L
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 339
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQ +V+ A
Sbjct: 230 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA ++ +M E ++P + Y +L+
Sbjct: 284 LVFSKMRQ--QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 341
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C + +RA L+ EM GI N I +N++ID + GR E + + + P
Sbjct: 342 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 401
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY++L+ GYC AG ++ A+K+L M+S G P TY+ + K +++DA+ L+
Sbjct: 402 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLF 461
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
R+M SG +PD +TY+I+L+ L + + A ++ + G ++L T +++H LC+
Sbjct: 462 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKN 521
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
D+A F+++ L TF + D K G A+ L SS
Sbjct: 522 KLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 571
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 6/334 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL+ YA+ VE A+ F + + A + ++ LCK GRV+ A YF
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQ----QGLNPNAVTYGAVIGILCKSGRVEDAMLYF 321
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++G + AE LEM + N + + ++++ +C
Sbjct: 322 EQM--IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 379
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++P+ I Y+T+IDG AG+ +E + ++ + P V
Sbjct: 380 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY++L+ GYCK ++ A + + M S G P TYN + + + A LY +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+SG + TY+I+L LCK D A+++ + + ++ T ++I L ++ +
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
DEA F GLVP+Y T++ + + +G+
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 593
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 173/389 (44%), Gaps = 9/389 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L + +PD + T+ ++ + +G + AI +
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCM---TYNSIVHGFCSSGQPKEAIVFLKKMR 185
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D LCK GR A + F + + P + Y LL G+
Sbjct: 186 S----DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK--RGLKPEITTYGTLLQGYA 239
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + M + + PN + LV Y + +V+ A+ + +MR++G+ PNA+
Sbjct: 240 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 299
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VI L ++GR E+ E+ + P + Y SL+ G C E A +++ M
Sbjct: 300 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 359
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG + +N K G+V ++ L+ M+ G PD +TY L+ C K+
Sbjct: 360 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 419
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ M G D T + LI+ C++ + +A F +M G+ P +T+ +
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNII 479
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ TA A++L ++ R +EL
Sbjct: 480 LQGLFQTRRTAAAKELYVGITKSGRQLEL 508
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 164/361 (45%), Gaps = 9/361 (2%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
GG PD VS T +I + + G ++ T+ N + + + ++ +L
Sbjct: 81 GGDCPPDVVSYST---VINGFFKEGDLDKTYSTY----NEMLDQRISPNVVTYNSIIAAL 133
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK V A E + P YN +++G+ S K+A F +MR + V P
Sbjct: 134 CKAQTVDKAMEVLTTM--VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEP 191
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVTY +L++ C+ R A ++ M K G++P Y T++ G G E+ G++
Sbjct: 192 DVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 251
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P ++ LV Y K +E A + M +G P+ TY K
Sbjct: 252 DLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 311
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+VEDAM + +MI+ G +P + Y+ L+ LC +K + A ++ EM RG ++
Sbjct: 312 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 371
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I C+ + E+ F+ M+R G+ P +T+ L D + G A KL M S
Sbjct: 372 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 431
Query: 383 V 383
V
Sbjct: 432 V 432
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 3/244 (1%)
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE--PNAIVYN 183
+DA + E+ + + P+V +Y L+ G C R A+ L+ M +G + P+ + Y+
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
TVI+G + G ++ L P +VTY S++ CKA ++ A ++L M+
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TYN F G+ ++A+ +KM G PD +TY+ L+ LCK + A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ M RG ++ T L+ E + M+R G+ P++ F L
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272
Query: 364 FKKR 367
+ K+
Sbjct: 273 YAKQ 276
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 110/255 (43%), Gaps = 2/255 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P Y+ L+NG+ + +KDA + E
Sbjct: 406 YSTLIDGYCLAGKMDEATKLLASMVSV--GMKPDCVTYSTLINGYCKISRMKDALVLFRE 463
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + K G + YN ++ GL +
Sbjct: 464 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKL 523
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ M + + + T+ ++ K G + A + S G +P+ TY
Sbjct: 524 TDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 583
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +E+ L+ M ++G T D + +++ L + ++ A + +
Sbjct: 584 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 643
Query: 315 CDIDLDTSTMLIHLL 329
++ T+++ I LL
Sbjct: 644 FSLEASTASLFIDLL 658
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG--CDIDLDTST 323
EDA +++ +++ G PD +Y+ILL LC E++ A+++ M G C D+ + +
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+I+ + D+ + + +M+ + + P+ +T+ ++ LC +V
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYN------------SIIAALCKA-QTV 139
Query: 384 PRSMELLDSRCK 395
++ME+L + K
Sbjct: 140 DKAMEVLTTMVK 151
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G +E A+ + + D N A + ++ SLCK+ RV A+E
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPN----AVTYNAIISSLCKENRVDEATEI 400
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P V +N L+ G S N K A + EM+ + P+ TY L++
Sbjct: 401 --ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C R+++ A+ L+KEM G N ++YNT+IDG + R EE + + +
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ G CK+ +E A++++ MI G P TYN +F K G ++ A ++ +
Sbjct: 519 VTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT 578
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M SG PD +TY L+ LCK ++ +A ++ + ++ +G + +I L + +
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK 358
EA F +M+ + P +T+K
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYK 662
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 182/386 (47%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKD--TFVILIRRYARAGMVEAAIWTFE 57
+IK L KA + A ++ E+P + +S D TF +++ Y G ++ A+ E
Sbjct: 209 LIKALCKAHQVRPAILMM------EEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262
Query: 58 FANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
MV+ +L++ CKQGR+ A + ++ + + + P YN L+
Sbjct: 263 -----QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFI--QEAVSEGFRPDQFTYNTLV 315
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG + + K A M + P++ TY +L+ G C+L ++ A++++ +M
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PNA+ YN +I L + R +E + + P + T+ SL++G C + + + A +
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M +G P TYN K+E+A+NL ++M +G + + Y+ L+ CK
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+++ A ++ EM+ +G D T LI LC+ + ++A+ + MI GL P T
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L F K G A + M+S
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTMTS 581
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 167/347 (48%), Gaps = 8/347 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ILI+ +A V AI E + + + + F ++ + G + A
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPD----ETTFTTIMQGYIEGGNLDGA--- 257
Query: 95 FHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++++ + P V N+L+NG+ + + A F E E P+ TY TLV G
Sbjct: 258 LRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNG 317
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C++ A+ +V M G++P+ YN++I GL + G EE ++++ + + P
Sbjct: 318 LCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPN 377
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VTY +++ CK ++ A++I +++ S+G LP T+N + + AM+L+
Sbjct: 378 AVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFE 437
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G PD TY++L+ LC KL+ A+ + KEM+ GC ++ LI C+
Sbjct: 438 EMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNK 497
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +EA F++M +G+ +T+ L D K A +L + M
Sbjct: 498 RIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 152/273 (55%), Gaps = 4/273 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+DSLC +++ A K EL+ A V +YN L++G+ ++K +++AE + E
Sbjct: 451 YNMLIDSLCSSRKLEEALNLL-KEMELN-GCARNVVIYNTLIDGFCKNKRIEEAEEIFDE 508
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V+ + VTY TL++G C+ +RV+ A +L+ +M EG+ P+ YN+++ + G
Sbjct: 509 MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGD 568
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + +++ P +VTY +L+ G CKAG ++ AS++L+ + +G + +P YN
Sbjct: 569 IKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNP 628
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK-EDKLDLAIQVSKEMKCR 313
+ K + +AM L+R+M++ PD +TY I+ + LC + A+ + EM R
Sbjct: 629 VIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIER 688
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
G + + ML LC + D+ + DMI
Sbjct: 689 GNIPEFSSFVMLAEGLCTL-SMDDTLVKLVDMI 720
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 162/341 (47%), Gaps = 20/341 (5%)
Query: 28 PDFV-SKDTFVILIRRYARAGMVEAAIWTFEFANN-LDMVK----NFDSGASLFEILLDS 81
P+FV S + ++R+ +AG +FE+ L+ +K FD G +F I ++S
Sbjct: 91 PNFVPSSSVYEEILRKLGKAG-------SFEYMRRVLEEMKLSGCEFDRG--IFLIFVES 141
Query: 82 LCKQGRVKAASEYFHKRKELDQSW--APTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
G+ + E K ++ + P R YN+LLN + +K E M +
Sbjct: 142 Y---GKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR 198
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
+ +V T+ L++ C+ +V AI +++EM G+ P+ + T++ G +E G +
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ E+ + T VT L+ G+CK G ++ A ++ +S GF P TYN
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K G + AM + M+ G PD TY+ L+ LCK +++ A+++ +M R C +
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T +I LC+ + DEA+ + +G++P TF L
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSL 419
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 178/388 (45%), Gaps = 46/388 (11%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF LIR G + A+ F+ M+ + F + L++ L
Sbjct: 134 GHQ-PDTA---TFTTLIRGLCVEGKIGDALHLFD-----KMIGEGFQPNVVTYGTLINGL 184
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G AA ++ + P V VY +++ + + V +A + +M + ++P
Sbjct: 185 CKVGNTNAAIRLLRSMEQ--GNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 242
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ TY +L+ C L L+ +M I P+ ++++TV+D L + G+ E ++
Sbjct: 243 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 302
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ ++ P +VTY +L+ G+C +++ A K+ M+ G+ P+ +YN + K
Sbjct: 303 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 362
Query: 263 ----------------------------------GKVEDAMNLYRKMIESGYTPDRLTYH 288
G+++DA+ L+ +M+ G PD TY
Sbjct: 363 QRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYR 422
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
ILL LCK+ LD A+ + K ++ D D+ T++I +CR + + A F ++ +
Sbjct: 423 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 482
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKL 376
GL P+ T+ + + +RG+ A KL
Sbjct: 483 GLRPNVRTYTIMINGLCRRGLLDEANKL 510
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 148/305 (48%), Gaps = 3/305 (0%)
Query: 56 FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
F +N +D IL++S C R+ A K +L P + L
Sbjct: 89 FSLSNQMDSF-GIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQ--PDTATFTTL 145
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ G + DA + +M E PNVVTYGTL+ G C++ + AIRL++ M +
Sbjct: 146 IRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNC 205
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+P+ +VY ++ID L + + E + + + P + TYTSL+ C + + +
Sbjct: 206 QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTT 265
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L MI+ +P ++ K GK+ +A ++ MI G P+ +TY+ L+ C
Sbjct: 266 LLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC 325
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ ++D A++V M G ++ + LI+ C++ + D+A+ FE+M ++ L+P+ +
Sbjct: 326 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTV 385
Query: 356 TFKRL 360
T+ L
Sbjct: 386 TYNTL 390
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 154/330 (46%), Gaps = 10/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L E+ LL I +PD V F ++ + G + A +
Sbjct: 250 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVV---IFSTVVDALCKEGKITEAHDVVDMM- 305
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + + L+D C Q + A + F + +AP V YN L+NG+
Sbjct: 306 ---IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM--VHNGYAPNVISYNTLINGYC 360
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + + A + EM ++ + PN VTY TL+ C + R+ AI L EM G P+
Sbjct: 361 KIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLA 419
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++D L + +E +++ P + YT ++ G C+AG+LE A I +
Sbjct: 420 TYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 479
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S+G P+ TY + G +++A L+ +M +G +PD TY+ + + L + +
Sbjct: 480 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 539
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
AIQ+ +EM RG D+ T+T+L+ +LC
Sbjct: 540 LRAIQLLQEMLARGFSADVSTTTLLVEMLC 569
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ L P+ +N LL ++K +M + P+V T L+ +C L
Sbjct: 58 NRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHL 117
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
R+ A ++ ++ K G +P+ + T+I GL G+ + + ++ + P +VTY
Sbjct: 118 NRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTY 177
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ G CK G+ A ++L+ M P Y K +V +A NL+ KM+
Sbjct: 178 GTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG 237
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G +PD TY L+ LC + + +M D+ + ++ LC+ K E
Sbjct: 238 QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 297
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLND 362
A + MI RG+ P+ +T+ L D
Sbjct: 298 AHDVVDMMIIRGVEPNVVTYNALMD 322
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 15/296 (5%)
Query: 112 YNILLNGWFRSKNVK-----DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
++ L + F SK++ DA + M + P+ V + L+ + ++ L
Sbjct: 32 FSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 91
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M GI P+ N +I+ R ++ + L P T+T+L++G C
Sbjct: 92 SNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCV 151
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A + MI GF P+ TY K G A+ L R M + PD +
Sbjct: 152 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 211
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LCK+ ++ A + +M +G D+ T T LIH LC + ++ + MI
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME--------LLDSRC 394
++P + F + D K G A + ++M + R +E L+D C
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM--IIRGVEPNVVTYNALMDGHC 325
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS 73
A L + + ++PD T+ IL+ + ++ A+ + N D
Sbjct: 402 AIALFHEMVAHGQIPDLA---TYRILLDYLCKKSHLDEAMALLKTIEG----SNMDPDIQ 454
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ I++D +C+ G ++AA + F + P VR Y I++NG R + +A + ++
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSS--KGLRPNVRTYTIMINGLCRRGLLDEANKLFM 512
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM +P+ TY T+ +G + + RAI+L++EM G + +++ L +
Sbjct: 513 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDK 572
Query: 194 RFEEVSGMMERFL 206
+ V ++ F+
Sbjct: 573 LDQSVKQILSEFV 585
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 37/338 (10%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C+ R + A + P V +YN ++NG +++++ +A + M K
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGF--GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 212
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + + VTY TL+ G R A RL+++M K I+PN I + +ID V+ G E
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P + TY SL+ G+C G L A + +M+S+G P TYN
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 258 YFSKFGKVEDAMNL-----------------------------------YRKMIESGYTP 282
F K +VED M L + +M++ G +P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +TY+ILL LC K++ A+ + ++++ D+D+ T ++I LCR K EA F
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ R+G+ P + + + ++G+ A KLC M
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 16/316 (5%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + A + L+ L GR A+ R + + P V + L++ + + N+
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLL--RDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + EM + +V PNV TY +L+ G+C + A + M +G P+ + YNT+
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPG-----PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
I G ++ R E+ GM L CE TY +L+ GYC+AG L A K+ M
Sbjct: 331 ITGFCKSKRVED--GMK---LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+E A+ + + +S D +TY+I+++ LC+ DKL
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + + + +G D +I LCR EA M G +P +R+
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS----ERI 501
Query: 361 NDEFKKRGMTALAQKL 376
DE + T+L+ +L
Sbjct: 502 YDETLRDHYTSLSAEL 517
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ ++ ++ L+ +CR R+ A+ L+ +M K G P+ + ++++G
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ RF+E +++ P +V Y +++ G CK DL A ++ M +G
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 251 TYN-------------------------------YFFR----YFSKFGKVEDAMNLYRKM 275
TYN FF F K G + +A NLY++M
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I P+ TY+ L+ C L A + M +GC D+ T LI C+ +
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMEL 389
++ F +M +GLV T+ L + + G +AQK+ C V + L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 390 LDSRCKD 396
LD C +
Sbjct: 401 LDCLCNN 407
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P++V + ++ ++ + D I L +M GI + + +I
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
R ++ + + P++VT SL+ G+C+ + A ++ M GF+
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ YN K + +A+ ++ M + G D +TY+ L+ L + A ++
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++M R D ++ T LI + EA +++MIRR +VP+ T+ L + F
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 367 RGMTALAQKLCNVMSS 382
G A+ + ++M S
Sbjct: 302 HGCLGDAKYMFDLMVS 317
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 215 VTYTSLVKGYCKAGDL---EGASKILKMMISRGFLPSPTTYNYFFRYFSKFG--KVEDAM 269
+ ++S VKG+ + L G + + +SR F + ++Y R ++ K +DA
Sbjct: 7 IAFSSSVKGFVRRHYLLLERGNNP--ETSLSRSFSGASHHHHYRERLRNELHCIKFDDAF 64
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ +M++S P + + +L ++ K +K D+ I + +M+ G DL + T+LIH
Sbjct: 65 SLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 124
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
CR + A A M++ G P +T L + F
Sbjct: 125 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF 159
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 179/379 (47%), Gaps = 16/379 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + + F+ WC + ++ + +F I+I+ AG +E +F+
Sbjct: 135 LLTFVVGSSSFNQWWCFFNES----KIKVVLDVYSFGIVIKGCCEAGEIEK---SFDLLV 187
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD---QSWAPTVRVYNILLN 117
L F ++ L+D CK+G ++ A + F + + W Y +L++
Sbjct: 188 ELREF-GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT-----YTVLIH 241
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G F++ K + +M++ V PN+ TY ++ C+ R A ++ EMR+ G+
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + YNT+I GL + E + +M++ P ++TY +L+ G+C L A +
Sbjct: 302 NIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLC 361
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + SRG PS TYN F K G A + ++M E G P ++TY IL+ +
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D ++ AIQ+ M+ G D+ T ++LIH C + +EAS F+ M+ + P+ + +
Sbjct: 422 DNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIY 481
Query: 358 KRLNDEFKKRGMTALAQKL 376
+ + K G + A +L
Sbjct: 482 NTMVLGYCKEGSSYRALRL 500
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 163/322 (50%), Gaps = 14/322 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G+ + +E + N + + +++ LCK GR K A +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHT----YNCVMNQLCKDGRTKDAFKV 290
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + + + YN L+ G R +A +M+ + + PN++TY TL++G+
Sbjct: 291 FDEMRE--RGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGRFEEVSGMMERFLVCEP 210
C +R++ +A+ L ++++ G+ P+ + YN ++ G + +G + V M ER +
Sbjct: 349 CGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI---- 404
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P+ VTYT L+ + ++ ++E A ++ M G P TY+ F G++ +A
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L++ M+E + P+ + Y+ ++ CKE A+++ +EM+ + ++ + +I +LC
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524
Query: 331 RMYKFDEASAEFEDMIRRGLVP 352
+ K EA E MI G+ P
Sbjct: 525 KERKSKEAEGLVEKMIDSGIGP 546
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 22/308 (7%)
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN- 143
Q + +S H E + S + R+Y +++N + +S+++ + ++ EM + P
Sbjct: 71 QSQFFTSSSLLHYLTESETSKTKS-RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGS 129
Query: 144 ---------VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
VV + + +C + I++V ++ GI VI G EAG
Sbjct: 130 NCFNNLLTFVVGSSSFNQWWCFFN--ESKIKVVLDVYSFGI---------VIKGCCEAGE 178
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ ++ P +V YT+L+ G CK G++E A + M G + + TY
Sbjct: 179 IEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTV 238
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G + +Y KM E G P+ TY+ ++ LCK+ + A +V EM+ RG
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LI LCR K +EA+ + M G+ P+ +T+ L D F A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKAL 358
Query: 375 KLCNVMSS 382
LC + S
Sbjct: 359 SLCRDLKS 366
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D+ + ++ A + +EL P V Y++L++G+ + +A R +
Sbjct: 411 YTILIDTFARSDNMEKAIQLRSSMEEL--GLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ PN V Y T+V GYC+ RA+RL +EM ++ + PN Y +I+ L + +
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528
Query: 195 FEEVSGMMERFLVCEPGPT 213
+E G++E+ + GP+
Sbjct: 529 SKEAEGLVEKMIDSGIGPS 547
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
SK T+ ILI +AR+ +E AI L + + + + +L+ C +GR+ A
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHT----YSVLIHGFCIKGRMNEA 462
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
S F + +++ + P +YN ++ G+ + + A R + EM ++ + PNV +Y ++
Sbjct: 463 SRLF--KSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
E C+ R+ A LV++M GI P+ + N +
Sbjct: 521 EVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 163/334 (48%), Gaps = 14/334 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
ILL+ LC RV L + + P + Y L+ G + A +
Sbjct: 134 LNILLNCLCNVNRVGEGLAVM--AGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTR 191
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE----GI--EPNAIVYNTVIDG 188
M+K TPN +TYGTL++G CR + A++L +EM + GI +P I Y+ +ID
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + R +E + E V PT+++YTSL+ G+C G E A ++ M+++G P+
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
T+N K GKV +A +L MI+ G P+ LTY+ L++ C L+ A ++
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M +GC+ D+ T+LI+ C+ K +EA + M++ G P T+ L + G
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 431
Query: 369 MTALAQKLCNVMS--SVPRSMEL----LDSRCKD 396
A+KL VM +P + + L+ CK+
Sbjct: 432 KVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 465
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 171/390 (43%), Gaps = 48/390 (12%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V T+ LI+ + A F L N A + L+ LC+ G
Sbjct: 163 IPDIV---TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPN----AITYGTLMKGLCRTG 215
Query: 87 RVKAASEYFHKRKELDQS-----WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
+ A + H+ D S + P V Y+I+++ + + +A + EM+ + +T
Sbjct: 216 NISIALK-LHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT 274
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P V++Y +L+ G+C + + A RL EM +G++PN + +N +ID L + G+ E +
Sbjct: 275 PTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+E + P ++TY SL++G+C GDL A ++ M S+G P Y + K
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 394
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLT----------------------------------- 286
KVE+AM LY M++ G PD T
Sbjct: 395 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 454
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I L LCK L A+++ ++K +D++ LI LC+ K + A FE +
Sbjct: 455 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 514
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ L P +T+ + EF + G A L
Sbjct: 515 QEELQPDVVTYNIMIHEFCRGGQVVKANIL 544
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 11/342 (3%)
Query: 51 AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTV 109
A F+F + L M N S F LL L K +K S+ F+ ++ S +P
Sbjct: 76 TATQAFQFFH-LMMYSNPTPPLSSFTHLLSGLAK---IKHYSQVFYLYNQMRLSGISPDC 131
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
NILLN V + + + P++VTY TL++G C R+ +A L
Sbjct: 132 CTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTR 191
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP------GPTMVTYTSLVKG 223
M+K G PNAI Y T++ GL G + + L P +++Y+ ++
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
CK + A + + M +G P+ +Y F GK E+A L+ +M+ G P+
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+T+++L+ +LCKE K+ A + + M RG +L T LI C + + A F
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
M +G P + + L + + K A KL N M V +
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 156/363 (42%), Gaps = 39/363 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTF-EFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ R G + A+ E N+ + NF + I++D+LCK R A
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEAR 262
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT------ 146
+ F + K Q PTV Y L++G+ ++A+R + EM + V PNVVT
Sbjct: 263 DLFEEMKV--QGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID 320
Query: 147 -----------------------------YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
Y +L+EG+C + ++ A L M +G EP
Sbjct: 321 VLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEP 380
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ I Y +I+G + + EE + L P + TY +L+ G + G + A K+
Sbjct: 381 DVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 440
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+M G Y F K G + +AM L+ K+ D ++ L+ LCK
Sbjct: 441 GVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKA 500
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
KL+ A ++ +++ D+ T ++IH CR + +A+ F+ M + G P +T+
Sbjct: 501 GKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY 560
Query: 358 KRL 360
L
Sbjct: 561 ATL 563
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 47/327 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ LI + G E A F N + N + F +L+D LCK+G+V A +
Sbjct: 279 SYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT----FNVLIDVLCKEGKVIEAKDL 334
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P + YN L+ G+ ++ A ++ M + P+V+ Y L+ GY
Sbjct: 335 LEVM--IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGY 392
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF---EEVSGMMERFLVCEPG 211
C+ +V+ A++L M + G P+ Y ++ GL + G+ +++ G+M+ + + PG
Sbjct: 393 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI--PG 450
Query: 212 PTMV----------------------------------TYTSLVKGYCKAGDLEGASKIL 237
+ + L+ G CKAG LE A ++
Sbjct: 451 DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 510
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + P TYN F + G+V A L++KM ++G TPD++TY L++ +
Sbjct: 511 EKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 570
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTM 324
KL+ +++ M R D+ LD + +
Sbjct: 571 KKLEKVVELLHMMVQR--DVSLDVNIL 595
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 9/283 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I VL K + A LL I VP+ ++ ++ LI + G + +A F
Sbjct: 318 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNS---LIEGFCLVGDLNSARELFVSMP 374
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + + +L++ CK +V+ A + ++ ++ + P V+ Y LL G F
Sbjct: 375 S----KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR--PDVKTYGALLTGLF 428
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ V DA++ + M+ + ++ YG + G C+ + A+ L +++ I+ +
Sbjct: 429 QGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIE 488
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N +IDGL +AG+ E + E+ E P +VTY ++ +C+ G + A+ + + M
Sbjct: 489 CFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 548
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
G P TY R F + K+E + L M++ + D
Sbjct: 549 EKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 185/404 (45%), Gaps = 21/404 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKD--TFVILIRRYARAGMVEAAIWTFE 57
++ +AK K+FD L G + + +S D ++ ILI + R + A+
Sbjct: 86 LLSAIAKMKKFDLVISL------GERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L ++ LL+ C R+ A + E+ + P +N L++
Sbjct: 140 KMMKL----GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM--GYKPDTVTFNTLIH 193
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G F +A +M + P++VTYG +V G C+ +D A+ L+K+M K IE
Sbjct: 194 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ ++YNT+IDGL + ++ + + P + TY SL+ C G AS++L
Sbjct: 254 DVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLL 313
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
MI R P+ T++ F K GK+ +A LY +MI+ PD TY L+ C
Sbjct: 314 SNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D+LD A + + M + C ++ T LI C+ + +E F +M +RGLV + +T+
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS--VPRSM----ELLDSRCK 395
L + G +AQK+ M S VP + LLD CK
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 2/303 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D LCK + A F+K + + P V YN L++ DA R
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMET--KGIRPDVFTYNSLISCLCNYGRWSDASRLLS 314
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + + PNVVT+ L++ + + ++ A +L EM K I+P+ Y+++I+G
Sbjct: 315 NMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E M E + + P +VTY +L+KG+CKA +E ++ + M RG + + TYN
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + G + A +++KM+ G PD +TY ILL LCK KL+ A+ V + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ D+ T ++I +C+ K ++ F + +G+ P+ + + + F ++G+ A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 374 QKL 376
L
Sbjct: 555 DAL 557
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 151/291 (51%), Gaps = 2/291 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
+++ LCK+G + A K ++ V +YN +++G + K++ DA + +M
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEK--GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMET 283
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + P+V TY +L+ C R A RL+ M + I PN + ++ +ID V+ G+ E
Sbjct: 284 KGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P + TY+SL+ G+C L+ A + ++MIS+ P+ TYN +
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K +VE+ M L+R+M + G + +TY+ L++ L + D+A ++ K+M G
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T ++L+ LC+ K ++A FE + + + P T+ + + K G
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 10/312 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR AS +++ P V ++ L++ + + + +AE+ + E
Sbjct: 293 YNSLISCLCNYGRWSDASRLLSNM--IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++ P++ TY +L+ G+C R+D A + + M + PN + YNT+I G +A R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 195 FEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
EE M +R LV G T VTY +L++G +AGD + A KI K M+S G P
Sbjct: 411 VEEGMELFREMSQRGLV---GNT-VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ K+GK+E A+ ++ + +S PD TY+I+++ +CK K++ + +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G ++ T +I CR +EA A F +M G +P + L + G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 586
Query: 371 ALAQKLCNVMSS 382
A + +L M S
Sbjct: 587 AASAELIKEMRS 598
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 166/342 (48%), Gaps = 15/342 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K K D A+ L +K+ + PD + ++ + + Y R W+
Sbjct: 261 IIDGLCKYKHIDDAFALF-NKMETKGIRPDVFTYNSLISCLCNYGR--------WSDASR 311
Query: 60 NNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+M+ + + F L+D+ K+G++ A + + + + +S P + Y+ L+NG
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSIDPDIFTYSSLING 369
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +A+ + M ++ PNVVTY TL++G+C+ +RV+ + L +EM + G+ N
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT+I GL +AG + + ++ + P ++TY+ L+ G CK G LE A + +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ P TYN K GKVED +L+ + G P+ + Y ++ C++
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+ A + +EMK G D LI R+ D+A++
Sbjct: 550 LKEEADALFREMKEDGTLPDSGCYNTLIR--ARLRDGDKAAS 589
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 131/262 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ++NG + ++ A +M K + +VV Y T+++G C+ + +D A L
Sbjct: 218 PDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFAL 277
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M +GI P+ YN++I L GR+ + S ++ + + P +VT+++L+ + K
Sbjct: 278 FNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVK 337
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ MI R P TY+ F ++++A +++ MI P+ +T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ +++ +EM RG + T LI L + D A F+ M+
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D K G
Sbjct: 458 SDGVPPDIITYSILLDGLCKYG 479
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 8/296 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
TF LI + + G + A ++ +M+K + D + L++ C R+ A
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYD-----EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + + P V YN L+ G+ ++K V++ + EM + + N VTY TL++G
Sbjct: 382 MFELM--ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+ D A ++ K+M +G+ P+ I Y+ ++DGL + G+ E+ + E + P
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TY +++G CKAG +E + + +G P+ Y F + G E+A L+R
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+M E G PD Y+ L++ ++ + ++ KEM+ G D T +M+I++L
Sbjct: 560 EMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 110/234 (47%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P++V + L+ ++++ D I L + M+ I + YN +I
Sbjct: 63 DAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ + ++ + + P +VT +SL+ GYC + + A ++ M+ G+
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 182
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P T+N K +A+ L +M++ G PD +TY ++ LCK +DLA+ +
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSL 242
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
K+M+ + D+ +I LC+ D+A A F M +G+ P T+ L
Sbjct: 243 LKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
++D AI L EM + P+ + +N ++ + + +F+ V + ER + +Y
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L+ +C+ L A +L M+ G+ P T + + ++ DA+ L +M+E
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR------- 331
GY PD +T++ L+ L +K A+ + +M RGC DL T +++ LC+
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 332 ---MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ K ++ E + +I ++ +K ++D F
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAF 275
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 185/378 (48%), Gaps = 23/378 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE-FA 59
++ L K+++ D A+ L + PD + T+ LI + G V+ AI +E
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLI---TYSTLIHGLCKQGEVQQAILLYEKMC 483
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+N + + GA +L LC++G++ A YF + + + + +YNI+++G+
Sbjct: 484 SNRIIPNSLIHGA-----ILMGLCEKGKISQARMYFDYL--ITSNLSLDIILYNIMIDGY 536
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ N ++A + + ++ ++ ++P +VT+ +L+ G+C R++ +A RL+ ++ G+EPNA
Sbjct: 537 IKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNA 596
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y T+++ E G + + ++ GPT +TYT ++KG CK L+ + ++L+
Sbjct: 597 VTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLED 656
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G P +YN + F K + A LY KM+ P +TY+IL+ C
Sbjct: 657 MDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGD 716
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A + ++ R +++ T +I C D+A F M+ +G
Sbjct: 717 LKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF--------- 767
Query: 360 LNDEFKKRGMTALAQKLC 377
E R +A+ +LC
Sbjct: 768 ---EVSIRDYSAVIGRLC 782
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 2/301 (0%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
I++D LC+Q R + A +F + + + P+V +N +++ + + V A+ F+ M
Sbjct: 250 SIVVDGLCRQSRFQDAVLFFQDTE--GKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMM 307
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K + P+ +Y L+ G C + A+ L +M G+EP+ + YN + G G
Sbjct: 308 LKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLI 367
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
++++ L+ P P +VTYT L+ G+C+ G++E A K+ K MIS GF S +
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVL 427
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K +V+ A L+ +M +G PD +TY L+ LCK+ ++ AI + ++M
Sbjct: 428 LGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRI 487
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ ++ LC K +A F+ +I L + + + D + KRG T A K
Sbjct: 488 IPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVK 547
Query: 376 L 376
L
Sbjct: 548 L 548
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 160/343 (46%), Gaps = 10/343 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ IL + + G++ A W ++K + + +L+ C+ G
Sbjct: 349 PDMV---TYNILAKGFRLLGLINGA-WNII---QKMLIKGPNPNLVTYTVLICGHCQIGN 401
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ A + + ++ + + ++ +LL +S+ V A + + EM + P+++TY
Sbjct: 402 VEEALKLY--KEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITY 459
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ V +AI L ++M I PN++++ ++ GL E G+ + + +
Sbjct: 460 STLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLIT 519
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
++ Y ++ GY K G+ A K+ K + +G P+ T+N F K+
Sbjct: 520 SNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQ 579
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L + G P+ +TY L+ + C+E + +++ EMK + T T++I
Sbjct: 580 ARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIK 639
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF-KKRGM 369
LC+ +K E+ EDM GL P +++ + F K R M
Sbjct: 640 GLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDM 682
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 164/367 (44%), Gaps = 15/367 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L + F A D G P VS +T ++ RY + G V+ A F +
Sbjct: 256 LCRQSRFQDAVLFFQDTEGKEFQPSVVSFNT---IMSRYCKLGFVDVAKSFFCMMLKHGL 312
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ + A + IL+ LC G + A + K + P + YNIL G+
Sbjct: 313 LPD----AYSYNILIHGLCIAGSMGEALDL--KNDMENHGLEPDMVTYNILAKGFRLLGL 366
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ A +M + PN+VTY L+ G+C++ V+ A++L KEM G + +I+ +T
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQL-SIISST 425
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
V+ G + R +V + F E P ++TY++L+ G CK G+++ A + + M
Sbjct: 426 VLLGSLCKSR--QVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S +P+ + + GK+ A + +I S + D + Y+I++ K
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+++ K++ +G + T L++ C K +A + + GL P+ +T+ L
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603
Query: 362 DEFKKRG 368
+ + + G
Sbjct: 604 NVYCEEG 610
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 8/325 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+++DS ++++L + + V A K K+L+ + +++ YN LL S +
Sbjct: 173 RSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLN--FIVSIQTYNSLLYNLRHSNIM 230
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
D + E++ + T +V+G CR R A+ ++ + +P+ + +NT+
Sbjct: 231 WDV---YNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTI 287
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ + G + L P +Y L+ G C AG + A + M + G
Sbjct: 288 MSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGL 347
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TYN + F G + A N+ +KM+ G P+ +TY +L+ C+ ++ A++
Sbjct: 348 EPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALK 407
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ KEM G + + +ST+L+ LC+ + D A F +M GL P +T+ L
Sbjct: 408 LYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLC 467
Query: 366 KRGMTALAQKLCNVMSS---VPRSM 387
K+G A L M S +P S+
Sbjct: 468 KQGEVQQAILLYEKMCSNRIIPNSL 492
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 120/251 (47%), Gaps = 4/251 (1%)
Query: 62 LDMVK--NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
LD +K + A + L++ C++G +++ E + K ++ PT Y +++ G
Sbjct: 584 LDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKA--KAIGPTHITYTVVIKGL 641
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++++ + +M +TP+ V+Y T+++ +C+ R + +A +L +M +EP +
Sbjct: 642 CKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTS 701
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN +I+G G ++ ++ + YT+++K +C GD++ A +
Sbjct: 702 VTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQ 761
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ +GF S Y+ K V +A + M+ G PD+ + +LL +
Sbjct: 762 MVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGH 821
Query: 300 LDLAIQVSKEM 310
L+ ++ EM
Sbjct: 822 LNSEFELLAEM 832
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 177/383 (46%), Gaps = 9/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LAKA + + A L + PD VS + LI RAG EAA+ E
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVS---YSCLINSLGRAGKWEAAL---EVVA 68
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K + L+D L K G+ A + + D P VR YN L++
Sbjct: 69 EM-QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR--DNGCVPDVRTYNCLISTLG 125
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A + EMR+ P+ TY +L+ G ++ R +A+ L++EM + G P+ +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++I GL + G + + + P +T+T+L+ KAG ++ A ++L M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG P TYN F K G + +A NL +M +G PD +TY L+ L K +L
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A QV K+M+ GC D T LI+ L + ++A F+ M +G P +T+ L
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365
Query: 361 NDEFKKRGMTALAQKLCNVMSSV 383
K A L M SV
Sbjct: 366 ITALGKAARVESACVLFEEMESV 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 2/283 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D+L K GRV A E + KE + P V YN L+ G+ + ++ +A E
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMKE--RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M++ P+VVTY L+ G + ++D A +++K+M KEG P+ I YNT+I+GL +AG
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + +R P +VTY++L+ KA +E A + + M S G P TY
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+V+DA L+ +M G +PD +TY+ L L + + A ++ ++MK G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D+ T L+ L + + D+A +++I +G L F
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 137/275 (49%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+P V YN LLN ++ ++A+ + E++ TP+VV+Y L+ R + + A+
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+V EM+ +G +PN YNT++D L +AG+F+E ++ P + TY L+
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
KAG L A + M RG +P TYN K G+ + AM L +M G PD +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ L K+ + A ++ +EMK RG D T T L+ L + + D+A ++M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG+ P +T+ L F K G A L + M
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 151/346 (43%), Gaps = 9/346 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + TF L+ +AG V+ A+ + + G + L+ K G
Sbjct: 217 PDSI---TFTALMDALGKAGRVDDALELLDEMKE----RGVKPGVVTYNALIAGFGKVGD 269
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + K P V Y+ L+ G ++ + +A + +M KE P+ +TY
Sbjct: 270 LVEAYNLLDEMKR--NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITY 327
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G + ++ A RL M+ +G P+ + Y+T+I L +A R E + E
Sbjct: 328 NTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMES 387
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + TY S++ KAG ++ A ++ M +G P TYN F + G+ ++
Sbjct: 388 VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKE 447
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A ++ M ESG PD TY LL L K ++D A + KE+ +GC D +
Sbjct: 448 ARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLE 507
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+L DEA + +GL P ++ L D K G + A
Sbjct: 508 ILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 179/405 (44%), Gaps = 22/405 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAG-MVEAAIWTFEF 58
++ L KA D A LLD++ V P V T+ LI + + G +VEA
Sbjct: 225 LMDALGKAGRVDDAL-ELLDEMKERGVKPGVV---TYNALIAGFGKVGDLVEAY------ 274
Query: 59 ANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
N LD +K + + L+ L K ++ A + K ++ + P YN L+
Sbjct: 275 -NLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK--EGCPPDTITYNTLI 331
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG ++ + DA R + M+ + P+VVTY TL+ + RV+ A L +EM GI+
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ Y ++I L +AG+ ++ + P ++TY + + + G + A KI
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M G LP TY+ SK +V+DA L +++IE G D L + L+IL
Sbjct: 452 FEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTS 511
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+D A ++ + +G + LI L + + EA ED+ +G P ++
Sbjct: 512 WGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVS 571
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS-----VPRSMELLDSRCKD 396
+ L + G A +L MS PRS L + +D
Sbjct: 572 YSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQD 616
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 44/271 (16%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI +A VE+A FE ++ + + + S+ +L K G+
Sbjct: 357 PDVV---TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL----GKAGQ 409
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A F + + + +P V YN LN R K+A + + +M++ + P+V TY
Sbjct: 410 VDDADRLFSEMR--GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Query: 148 GTLVEGYCRLRRVDRAIRLVKEM-----------------------------------RK 172
L+ G + + VD A L+KE+
Sbjct: 468 DALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANS 527
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+G+ P A YN +ID L +AGR E +E P +V+Y+SL+ + G ++
Sbjct: 528 KGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDT 587
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
A ++L+ M RG SP +Y+ R +G
Sbjct: 588 AFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P +VTY SL+ KAG E A + + + + + P +Y+ + GK E A+
Sbjct: 5 PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ +M G P+ TY+ L+ L K + D A+++ EM+ GC D+ T LI L
Sbjct: 65 EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + EA F +M RG VP T+ L K G + A +L M
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 36/224 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYAR-------------AG 47
+I VL KA + D A L + G PD ++ + F+ + R R +G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 48 MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA- 106
++ L K D L + L++ C +K F + E+ SW
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLK-----FDECLEILTSWGN 514
Query: 107 -----------------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
P YN L++ ++ V +A +++++ P++V+Y +
Sbjct: 515 VDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSS 574
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
L+ + ++D A L++EM K G++ + Y+ ++ L + G
Sbjct: 575 LISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 14/382 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L ++ FD AW + +++ V D S F I+I+ G EA + F
Sbjct: 130 LLCLLIRSNYFDKAW-WIFNELKSKVVLDAYS---FGIMIK-----GCCEAGYFVKGF-R 179
Query: 61 NLDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L M++ F ++ L+D CK G V A F K L P Y++L+NG
Sbjct: 180 LLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRL--GLVPNPHTYSVLMNG 237
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+F+ ++ + + M++ + PN Y L+ YC VD+A ++ EMR++GI
Sbjct: 238 FFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACG 297
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YN +I GL +F E ++ + P +VTY L+ G+C ++ A ++
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFN 357
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ S G P+ TYN +SK + A++L ++M E P ++TY IL+ + +
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A ++ M+ G D+ T ++L+H LC EAS F+ + L P+ + +
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
+ + K G + A +L N M
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEM 499
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 161/339 (47%), Gaps = 17/339 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ T+ +L+ + + G+ +E +V N A + L+ C G
Sbjct: 225 VPN---PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN----AYAYNCLISEYCNDG 277
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A + F + +E + A V YNIL+ G R K +A + ++ K ++PN+VT
Sbjct: 278 MVDKAFKVFAEMRE--KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVT 335
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGRFEEVSGMM 202
Y L+ G+C +R++D A+RL +++ G+ P + YNT+I G + AG + V M
Sbjct: 336 YNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
ER + P+ VTYT L+ + + E A ++ +M G +P TY+
Sbjct: 396 ERCI----APSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVH 451
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G +++A L++ + E P+ + Y+ ++ CKE A+++ EM G ++ +
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASF 511
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
I LLCR K+ EA MI GL P +K ++
Sbjct: 512 CSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVH 550
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 41/290 (14%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LI Y GMV+ A F K G + IL+ LC+ + A + HK
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMRE----KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
++ S P + YNIL+NG+ + + A R + +++ ++P +VTY TL+ GY ++
Sbjct: 325 NKVGLS--PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVID------------------------------- 187
+ A+ LVKEM + I P+ + Y +ID
Sbjct: 383 NLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYS 442
Query: 188 ----GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
GL G +E S + + P V Y +++ GYCK G A ++L M+
Sbjct: 443 VLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQS 502
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
G +P+ ++ + K ++A L +MI SG P Y ++ K+
Sbjct: 503 GMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 43/272 (15%)
Query: 133 LEMRKENVTPNVV---TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP------------ 177
L++ + + TP Y T+V Y D+A+ + M EG P
Sbjct: 75 LQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLL 134
Query: 178 ----------------------NAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGP 212
+A + +I G EAG F + + M+E F + P
Sbjct: 135 IRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGL---SP 191
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+V YT+L+ G CK G++ A + M G +P+P TY+ F K G + +Y
Sbjct: 192 NVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY 251
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M SG P+ Y+ L+ C + +D A +V EM+ +G + T +LI LCR
Sbjct: 252 ENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
KF EA + + GL P+ +T+ L + F
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 163/322 (50%), Gaps = 9/322 (2%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ A L + +G + +P+ V TF IL+ + GMV A FE K +
Sbjct: 282 HLNEATILFNEMVGRNVMPNTV---TFTILVDGLCKEGMVSEARCVFEAMTK----KGAE 334
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A + L+D C ++ A + +D+ AP V YNIL+NG+ + + + +A+
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIM--VDKGCAPVVHSYNILINGYCKRRRLDEAK 392
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+EM ++ +TP+ VTY TL++G C++ R A+ L KEM G+ P+ + Y+T++DGL
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGL 452
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G +E +++ + P +V Y L++G AG LE A ++ + + G P+
Sbjct: 453 CKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTI 512
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY + K G ++A L+RKM + G+ P+ +Y+++++ + AI++ E
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDE 572
Query: 310 MKCRGCDIDLDTSTMLIHLLCR 331
M + D T ML+ L R
Sbjct: 573 MVGKRFSADSSTFQMLLDLESR 594
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 166/353 (47%), Gaps = 10/353 (2%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
GH+ PD +S T +I ++G A+ K + ++DSLC
Sbjct: 192 GHQ-PDVISYST---VINGLCKSGNTSMALQLLRKMEE----KGCKPNLVAYTTIIDSLC 243
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K V A + + +D+ P V Y+ +L+G+ ++ +A + EM NV PN
Sbjct: 244 KDTLVNDAMDLLSEM--VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VT+ LV+G C+ V A + + M K+G EPNA YN ++DG + +E +++
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P + +Y L+ GYCK L+ A +L M + P TY+ + + G
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ ++A+NL+++M SG PD +TY LL LCK LD A+++ K M+ + D+
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYN 481
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+LI + K + A F + G+ P T+ + K G++ A +L
Sbjct: 482 ILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ LC+ V A K +L P +N L+NG +K+A + E
Sbjct: 130 LNILINCLCRLNHVVFAISVLGKMFKL--GIQPDAITFNTLINGRCIEGEIKEAVGLFNE 187
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+V++Y T++ G C+ A++L+++M ++G +PN + Y T+ID L +
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTL 247
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++ + P +VTY++++ G+C G L A+ + M+ R +P+ T+
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G V +A ++ M + G P+ TY+ L+ C +++D A +V M +G
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C + + +LI+ C+ + DEA + +M + L P +T+ L + G A
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 375 KLCNVMSS---VPRSM---ELLDSRCK 395
L M S +P M LLD CK
Sbjct: 428 NLFKEMCSSGLLPDLMTYSTLLDGLCK 454
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+V + L + K +M VT NV + L+ CRL V AI +
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K GI+P+AI +NT+I+G G +E G+ + P +++Y++++ G CK
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G+ A ++L+ M +G P+ Y K V DAM+L +M++ G PD +T
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y +L C L+ A + EM R + T T+L+ LC+ EA FE M
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++G P+ T+ L D + AQK+ ++M
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 149/306 (48%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L C G + A+ F++ + ++ P + IL++G + V +A +
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEM--VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEA 327
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+ PN TY L++GYC ++D A +++ M +G P YN +I+G + R
Sbjct: 328 MTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR 387
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ E P VTY++L++G C+ G + A + K M S G LP TY+
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +++A+ L + M ES PD + Y+IL++ + KL++A ++ ++ G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T T++I L + DEA F M G +P+ ++ + F + ++ A
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAI 567
Query: 375 KLCNVM 380
+L + M
Sbjct: 568 RLIDEM 573
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 117 NGWFRSKN---VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
NG F S N + DA + M + N P+VV +G + + ++ + L +M
Sbjct: 62 NGGFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLF 121
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G+ N N +I+ L ++ + P +T+ +L+ G C G+++ A
Sbjct: 122 GVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEA 181
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ M+ RG P +Y+ K G A+ L RKM E G P+ + Y ++
Sbjct: 182 VGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS 241
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LCK+ ++ A+ + EM RG D+ T + ++H C + +EA+ F +M+ R ++P+
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+TF L D K GM + A+ + M+
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMT 329
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 177/363 (48%), Gaps = 21/363 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V+ T L++ + A F L + N + A+L + LC+ G
Sbjct: 404 IPDVVTCTT---LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMK----GLCQSG 456
Query: 87 RVKAASEYFHKRKELDQS-----WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
+K A E HK D S P Y+I+++G + +A + EM+ V
Sbjct: 457 NIKIALE-LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 515
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+V++Y +L+ G+CR + A L EM G++P+ ++ +ID L + G+ E + +
Sbjct: 516 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+E + P VTYT+LVKG C + A+++ M G LP TY + +
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635
Query: 262 FGKVEDAMNLYRKMIE------SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
G ++ A+ L++KM+ + + PD ++Y I++ LCK + D A ++ KEMK G
Sbjct: 636 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT--ALA 373
++ + T LIH CR K ++A F +M+ +G+ + +T+ + F K G AL
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALF 755
Query: 374 QKL 376
QK+
Sbjct: 756 QKM 758
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 191/401 (47%), Gaps = 56/401 (13%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD +S + LI + +G E A F LD+ D S +L+D LCK+G
Sbjct: 334 MPDVIS---YTTLIHGFCLSGKWEKAKCLFN--EMLDVGIQPDVTTS--SVLIDMLCKKG 386
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V A++ + + P V L+ G + A + +L+M+K PNVVT
Sbjct: 387 KVIEANKLLEVV--IQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 444
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKE----GI--EPNAIVYNTVIDGLVEAGRFEEVSG 200
TL++G C+ + A+ L K M + GI +PNAI Y+ +IDGL + GR +E
Sbjct: 445 CATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARE 504
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAG----------------------------DL-- 230
+ + P +++YTSL+ G+C++G D+
Sbjct: 505 LFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLC 564
Query: 231 -EG----ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
EG A+++L++MI RG +P+ TY + ++ +A L+ KM + G PD +
Sbjct: 565 KEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVV 624
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCR----GCDI--DLDTSTMLIHLLCRMYKFDEAS 339
TY L+K LC+ + A+++ K+M G + D+ + +++I LC+ + DEA
Sbjct: 625 TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAR 684
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F++M G++P+ +++ L F + G A+ L N M
Sbjct: 685 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 725
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 185/423 (43%), Gaps = 62/423 (14%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD +S + LI + R+G E A F LD+ S + +L+D LCK+G
Sbjct: 153 MPDVIS---YTSLIHGFCRSGKWEKAKCLFN--EMLDV--GIRSDVTTSSMLIDILCKEG 205
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V A+E + + + Y+ L+ G + +A R ++ M+K P+ +
Sbjct: 206 KVIEANELLEVM--IQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIA 263
Query: 147 YGTL-----------------------------------------VEGYCRLRRVDRAIR 165
YGTL ++G C+ RR D A
Sbjct: 264 YGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 323
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L KEM+ +GI P+ I Y T+I G +G++E+ + L P + T + L+ C
Sbjct: 324 LFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 383
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G + A+K+L+++I RG +P T + ++ A L+ KM + G P+ +
Sbjct: 384 KKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 443
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCR------GCDIDLDTSTMLIHLLCRMYKFDEAS 339
T L+K LC+ + +A+++ K M C + + +++I LC+ + DEA
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSR 393
F++M G++P +++ L F + G A+ L N M + + L+D
Sbjct: 504 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563
Query: 394 CKD 396
CK+
Sbjct: 564 CKE 566
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 26/342 (7%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC + R+ A++ F K+L P Y L+ G ++ + A E
Sbjct: 48 YSTLIKGLCMKHRISEATQLFMSMKKL--GCRPDAIAYGTLMKGLCQTGKINIALHLHQE 105
Query: 135 MRKEN------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P +V+Y +++G C+ RR D A L KEM+ +G+ P+ I Y ++I G
Sbjct: 106 MLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 165
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
+G++E+ + L + T + L+ CK G + A+++L++MI RG +
Sbjct: 166 FCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD 225
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TY+ + ++ +A L+ M + G PD + Y L+K LC+ ++ A+Q+ +
Sbjct: 226 IVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQ 285
Query: 309 EM---------KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
EM KC+ L + +++I LC+ + DEA F++M +G++P +++
Sbjct: 286 EMLNDTGRYGIKCKP---TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTT 342
Query: 360 LNDEFKKRGMTALAQKLCN------VMSSVPRSMELLDSRCK 395
L F G A+ L N + V S L+D CK
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 384
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V +L++ + + V +A M + ++VTY TL++G C R+ A +L
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL--VCEPG----PTMVTYTSL 220
M+K G P+AI Y T++ GL + G+ + + L + G PT+V+Y+ +
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK + A ++ K M ++G +P +Y F + GK E A L+ +M++ G
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
D T +L+ ILCKE K+ A ++ + M RGC +D+ T + LI LC ++ EA+
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATR 247
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F M + G P + + L + G A +L
Sbjct: 248 LFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQL 283
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M GI+P+ +ID + G+ E + ++E + +VTY++L+KG C
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE--SGY----TPD 283
+ A+++ M G P Y + + GK+ A++L+++M+ S Y P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
++Y I++ LCK+ + D A ++ KEMK +G D+ + T LIH CR K+++A F
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+M+ G+ T L D K G A +L VM
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVM 217
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + T L+ +CK G + A+++L++M+ RG + TY+ + ++ +A L
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM---------KCRGCDIDLDTS 322
+ M + G PD + Y L+K LC+ K+++A+ + +EM KC+ L +
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP---TLVSY 124
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM-- 380
+++I LC+ + DEA F++M +G++P +++ L F + G A+ L N M
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 381 ----SSVPRSMELLDSRCKD 396
S V S L+D CK+
Sbjct: 185 VGIRSDVTTSSMLIDILCKE 204
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 151/279 (54%), Gaps = 2/279 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ ++++ C+ G ++ A++ + + P R Y +L+NG+ + ++ AE
Sbjct: 284 LYTAVINAYCRAGNMRRAAKVLDEC--VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 341
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+ + V N + + T+++GYCR VD A+++ M K G+E + YNT+ GL
Sbjct: 342 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN 401
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E ++ + P VTYT+L+ +CK GD+ A ++ + M +G PS TYN
Sbjct: 402 RLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 461
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
++K G + +A ++M + G+ PD TY L+ C K+D+A+++ +EMK R
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
G + ++ T LI L + + + A ++DM++ GL+P
Sbjct: 522 GTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIP 560
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ ++ + IL+DSL + F++ K + V +Y ++N + R+ N+
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKA--NNVVGDVYLYTAVINAYCRAGNM 298
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ A + E V PN TYG L+ G+C++ +++ A L+ +M+ +G+ N I++NT+
Sbjct: 299 RRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 358
Query: 186 IDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
IDG G ++ + ME+ V + TY +L G C+ L+ A +L +MI
Sbjct: 359 IDGYCRKGMVDDALKIKAAMEKMGV---ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G +P+ TY K G + +A L+R+M E G TP +TY++++ K+ +
Sbjct: 416 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIRE 475
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + KEM+ +G D+ T L+H C K D A FE+M +RG P+ + + L
Sbjct: 476 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 535
Query: 363 EFKKRGMTALAQKLCNVM 380
K G + A +L + M
Sbjct: 536 GLAKEGRSEAAFQLYDDM 553
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 130/264 (49%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+++++G +S V DA R +M + V+ N + Y +L++ Y R + R +++ M
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
EGIE Y ++D L A +V + + YT+++ YC+AG++
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A+K+L + G P+ TY F K G++E A L M G +++ ++ ++
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C++ +D A+++ M+ G ++D+ T L LCR+ + DEA MI G+VP
Sbjct: 361 GYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP 420
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL 376
+Y+T+ L K G A++L
Sbjct: 421 NYVTYTTLISIHCKDGDMVEARRL 444
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 26/281 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG------RV 88
T+ +LI + + G +EAA + N +F ++D C++G ++
Sbjct: 319 TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLN----QIIFNTMIDGYCRKGMVDDALKI 374
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
KAA E ELD + YN L G R + +A+ M + V PN VTY
Sbjct: 375 KAAMEKMGV--ELD------IYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYT 426
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-- 206
TL+ +C+ + A RL +EM ++G P+ + YN +IDG + G E ERF
Sbjct: 427 TLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREA----ERFRKE 482
Query: 207 VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ + G P + TY SLV G+C G ++ A K+ + M RG P+ Y +K G+
Sbjct: 483 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 542
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
E A LY M+++G PD Y L+ L +++ D+ +
Sbjct: 543 SEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 583
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 10/296 (3%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV----YNILLNGWFRSKNVKDAERFW 132
+++D LCK GRV A R+ LD V + YN LL+ + R K+ +
Sbjct: 182 VVVDGLCKSGRVDDA------RRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 235
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M E + V TY LV+ R + + L EM+ + + +Y VI+ A
Sbjct: 236 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G + +++ + P TY L+ G+CK G +E A +L M +G + +
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 355
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + + G V+DA+ + M + G D TY+ L LC+ ++LD A + M
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
G + T T LI + C+ EA F +M +G P +T+ + D + K+G
Sbjct: 416 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKG 471
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 36/252 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
+I K + ++A LL D + G V +++ F +I Y R GMV+ A
Sbjct: 323 LINGFCKIGQMEAAEMLLAD-MQGQGV--GLNQIIFNTMIDGYCRKGMVDDALKIKAAME 379
Query: 53 -------IWTFE-FANNLDMVKNFDSGASLFEI---------------LLDSLCKQGRVK 89
I+T+ A L V D +L I L+ CK G +
Sbjct: 380 KMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMV 439
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A F R+ ++ P+V YN++++G+ + ++++AERF EM K+ P+V TY +
Sbjct: 440 EARRLF--REMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYAS 497
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
LV G+C +VD A++L +EM++ G EPN + Y +I GL + GR E + + L
Sbjct: 498 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 557
Query: 210 PGPTMVTYTSLV 221
P Y++LV
Sbjct: 558 LIPDDSLYSALV 569
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 87/203 (42%)
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + + V+DGL ++GR ++ +++ + Y SL+ Y + D +IL
Sbjct: 176 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 235
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
++M + G + TY S + L+ +M + D Y ++ C+
Sbjct: 236 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ A +V E G + + T +LI+ C++ + + A DM +G+ + + F
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 355
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ D + ++GM A K+ M
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAM 378
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 192 AGRFEEVSGMMERFLVCEPGP-TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AGR + +G++ER L PG + + + +V G CK+G ++ A ++L M G +
Sbjct: 154 AGRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNAL 213
Query: 251 TYNYFFRYFSKF---GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
YN + + G+V++ + + M G TY IL+ L + +
Sbjct: 214 CYNSLLDCYVRQKDDGRVQEILEI---MENEGIEATVGTYTILVDSLSTARDISKVEALF 270
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EMK D+ T +I+ CR A+ ++ + G+ P+ T+ L + F K
Sbjct: 271 NEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKI 330
Query: 368 GMTALAQKL 376
G A+ L
Sbjct: 331 GQMEAAEML 339
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T LI+ G + A+ +F + + + F + L++ LCK G+ AA +
Sbjct: 144 TLTTLIKGLCLKGQIHQAL---QFHDKV-VALGFHLNKVSYGTLINGLCKVGQTSAALQL 199
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R+ + P V +YN +++ + K V +A + EM + ++P+VVTY L+ G+
Sbjct: 200 L--RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGF 257
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + ++ A L +M E I PN +N ++DG + R +E ++ + P +
Sbjct: 258 CIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDV 317
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY SL+ YC ++ A I + RG P+ +Y+ F K KV++AMNL+++
Sbjct: 318 FTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKE 377
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + PD +TY+ L+ LCK K+ A+++ EM RG D T ++ LC+ ++
Sbjct: 378 MHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 437
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+A A M G+ P T+ L D K G
Sbjct: 438 VDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNG 471
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 171/348 (49%), Gaps = 12/348 (3%)
Query: 13 SAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDS 70
SA LL ++ G V P+ V +T +I + +V A + +MV K
Sbjct: 194 SAALQLLRRVDGKLVQPNVVMYNT---IIDSMCKVKLVNEAFDLYS-----EMVSKGISP 245
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+ L+ C G++K A++ F+K + ++ P V +NIL++G+ + + +K+A+
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKM--IFENINPNVYTFNILVDGFCKERRLKEAKN 303
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
M K+ + P+V TY +L++ YC ++ V++A + + + G+ PN Y+ +I G
Sbjct: 304 VLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFC 363
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ + +E + + P +VTY SL+ G CK G + A K++ M RG
Sbjct: 364 KIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKI 423
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K +V+ A+ L KM + G PD TY L+ LCK +L+ A V +++
Sbjct: 424 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDL 483
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+G +D++ T +I C FDE+ M G +P+ +T++
Sbjct: 484 LVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYE 531
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K L + P V L+ G + A +F ++ N V+YGTL+ G C++
Sbjct: 132 KILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVG 191
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+ A++L++ + + ++PN ++YNT+ID + + E + + P +VTY
Sbjct: 192 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ G+C G ++ A+ + MI P+ T+N F K ++++A N+ M++
Sbjct: 252 ALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQ 311
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD TY+ L+ C +++ A + + RG + ++ + +++IH C++ K DEA
Sbjct: 312 GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEA 371
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPRSM----ELLDS 392
F++M ++P +T+ L D K G + A KL + M VP +LD+
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431
Query: 393 RCKD 396
CK+
Sbjct: 432 LCKN 435
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 15/353 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K K + A+ L + + PD V T+ LI + G ++ A F
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVV---TYNALISGFCIVGKMKDATDLF---- 270
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + +N + F IL+D CK+ R+K A + Q P V YN L++ +
Sbjct: 271 NKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL--AMMMKQGIKPDVFTYNSLMDRYC 328
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V A+ + + + V PN+ +Y ++ G+C++++VD A+ L KEM I P+ +
Sbjct: 329 LVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVV 388
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN++IDGL + G+ +++ +TY S++ CK ++ A +L M
Sbjct: 389 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM 448
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P TY K G++EDA ++ ++ GY D Y +++ C
Sbjct: 449 KDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLF 508
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGL 350
D ++ + +M+ GC + T ++I C ++ DE A +MI RGL
Sbjct: 509 DESLDLLSKMEENGCIPNAVTYEIII---CSLFDKDENDKAEKLLREMITRGL 558
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 106/232 (45%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ ++N P++ +G ++ + + L ++M GI + ++ + +I+ + G+
Sbjct: 63 LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + L P ++T T+L+KG C G + A + +++ GF + +Y
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+ A+ L R++ P+ + Y+ ++ +CK ++ A + EM +G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
D+ T LI C + K +A+ F MI + P+ TF L D F K
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK 294
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 37/338 (10%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C+ R + A + P V +YN ++NG +++++ +A + M K
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGF--GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 737
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + + VTY TL+ G R A RL+++M K I+PN I + +ID V+ G E
Sbjct: 738 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 797
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P + TY SL+ G+C G L A + +M+S+G P TYN
Sbjct: 798 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 857
Query: 258 YFSKFGKVEDAMNL-----------------------------------YRKMIESGYTP 282
F K +VED M L + +M++ G +P
Sbjct: 858 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 917
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +TY+ILL LC K++ A+ + ++++ D+D+ T ++I LCR K EA F
Sbjct: 918 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 977
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ R+G+ P + + + ++G+ A KLC M
Sbjct: 978 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 1015
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 167/349 (47%), Gaps = 15/349 (4%)
Query: 11 FDSAWCLLLDKIGGHEVP---DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
F+ A+ L + + +P DF T +RRY E I+ F+ +++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRY------ETVIY---FSQKMELY-G 101
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F IL+ C+ R+ A K +L + P++ + LL+G+ + D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL--GYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + M K PNVV Y TL++G C+ ++ A+ L+ EM K+G+ + + YNT++
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL +GR+ + + M+ + P +VT+T+L+ + K G+L+ A ++ K MI P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN G++ DA + M G P+ +TY+ L+ CK +D +++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ M C G + D+ T LIH C++ K A F M+ R + P +T
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 147/312 (47%), Gaps = 8/312 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
+F ILI + R + A+ M+K ++ F LL C R+ A
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLG-----KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + P V VYN L++G ++ + A EM K+ + +VVTY TL+ G
Sbjct: 163 LVILM--VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C R A R++++M K I P+ + + +ID V+ G +E + + + P
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VTY S++ G C G L A K +M S+G P+ TYN F KF V++ M L++
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G+ D TY+ L+ C+ KL +A+ + M R D+ T +L+H LC
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 334 KFDEASAEFEDM 345
+ + A +F+DM
Sbjct: 401 EIESALVKFDDM 412
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 7/297 (2%)
Query: 64 MVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MVK+ ++ ++ L+D LCK G + A E ++ ++ + V YN LL G S
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK--KGLGADVVTYNTLLTGLCYS 224
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
DA R +M K ++ P+VVT+ L++ + + +D A L KEM + ++PN + Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N++I+GL GR + + L+ G P +VTY +L+ G+CK ++ K+ + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFD--LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
GF TYN + + GK+ A++++ M+ TPD +T+ ILL LC ++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ A+ +M+ I + ++IH LC+ K ++A F + G+ P T+
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
YF ++ EL + + + IL++ + R + A +M K P++VT+G+L+ G
Sbjct: 92 YFSQKMEL-YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C + R+ A LV M K G EPN +VYNT+IDGL + G ++ G
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY +L+ G C +G A+++L+ M+ R P T+ F K G +++A LY+
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+MI+S P+ +TY+ ++ LC +L A + M +GC ++ T LI C+
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
DE F+ M G T+ L + + G +A
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 16/316 (5%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + A + L+ L GR A+ R + + P V + L++ + + N+
Sbjct: 738 KGIRADAVTYNTLISGLSNSGRWTDAARLL--RDMVKRKIDPNVIFFTALIDTFVKEGNL 795
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + EM + +V PNV TY +L+ G+C + A + M +G P+ + YNT+
Sbjct: 796 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 855
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPG-----PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
I G ++ R E+ GM L CE TY +L+ GYC+AG L A K+ M
Sbjct: 856 ITGFCKSKRVED--GMK---LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 910
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+E A+ + + +S D +TY+I+++ LC+ DKL
Sbjct: 911 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 970
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + + + +G D +I LCR EA M G +P +R+
Sbjct: 971 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS----ERI 1026
Query: 361 NDEFKKRGMTALAQKL 376
DE + T+L+ +L
Sbjct: 1027 YDETLRDHYTSLSAEL 1042
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ + LL + + F +M ++ ++ ++ L+ +CR R+ A+ +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + + +++ G R + ++ + P +V Y +L+ G CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+L A ++L M +G TYN G+ DA + R M++ PD +T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L+ + K+ LD A ++ KEM D + T +I+ LC + +A F+ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+G P+ +T+ L F K M KL MS
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L G+ S +DA + EM P++V + L+ LRR + I ++M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I + + ++T L+ +C+ L A
Sbjct: 102 ISHD-----------------------------------LYSFTILIHCFCRCSRLSFAL 126
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+L M+ G+ PS T+ F ++ DA +L M++SGY P+ + Y+ L+ L
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CK +L++A+++ EM+ +G D+ T L+ LC ++ +A+ DM++R + P
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
+TF L D F K+G AQ+L
Sbjct: 247 VTFTALIDVFVKQGNLDEAQEL 268
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ ++ ++ L+ +CR R+ A+ L+ +M K G P+ + ++++G
Sbjct: 626 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 685
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ RF+E +++ P +V Y +++ G CK DL A ++ M +G
Sbjct: 686 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 745
Query: 251 TYN-------------------------------YFFR----YFSKFGKVEDAMNLYRKM 275
TYN FF F K G + +A NLY++M
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 805
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I P+ TY+ L+ C L A + M +GC D+ T LI C+ +
Sbjct: 806 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMEL 389
++ F +M +GLV T+ L + + G +AQK+ C V + L
Sbjct: 866 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925
Query: 390 LDSRCKD 396
LD C +
Sbjct: 926 LDCLCNN 932
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 166/382 (43%), Gaps = 56/382 (14%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V+ +T LI + + MV+ + F+ + + F++ + L+ C+ G+
Sbjct: 314 PNVVTYNT---LISGFCKFRMVDEGMKLFQRMS----CEGFNADIFTYNTLIHGYCQVGK 366
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + F + + P + + ILL+G + ++ A + +MR+ +V Y
Sbjct: 367 LRVALDIFCWM--VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF-- 205
++ G C+ +V++A L + EG++P+A Y +I GL + G E ++ R
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 206 --LVCEPGP------------------------------------TMVTYTSLVKGYCKA 227
++C+ + ++S VKG+ +
Sbjct: 485 EGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRR 544
Query: 228 GDL---EGASKILKMMISRGFLPSPTTYNYFFRYFSKFG--KVEDAMNLYRKMIESGYTP 282
L G + + +SR F + ++Y R ++ K +DA +L+ +M++S P
Sbjct: 545 HYLLLERGNNP--ETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIP 602
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ + +L ++ K +K D+ I + +M+ G DL + T+LIH CR + A A
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662
Query: 343 EDMIRRGLVPHYLTFKRLNDEF 364
M++ G P +T L + F
Sbjct: 663 GKMMKLGFRPSIVTLGSLLNGF 684
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P++V + ++ ++ + D I L +M GI + + +I
Sbjct: 587 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 646
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
R ++ + + P++VT SL+ G+C+ + A ++ M GF+
Sbjct: 647 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 706
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ YN K + +A+ ++ M + G D +TY+ L+ L + A ++
Sbjct: 707 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++M R D ++ T LI + EA +++MIRR +VP+ T+ L + F
Sbjct: 767 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826
Query: 367 RGMTALAQKLCNVMSS 382
G A+ + ++M S
Sbjct: 827 HGCLGDAKYMFDLMVS 842
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
PD V TF LI + + G ++ A ++ +M+++ D + +++ LC G
Sbjct: 244 PDVV---TFTALIDVFVKQGNLDEAQELYK-----EMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R+ A + F + P V YN L++G+ + + V + + + M E ++ T
Sbjct: 296 RLYDAKKTFDLMAS--KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV------------------------- 181
Y TL+ GYC++ ++ A+ + M + P+ I
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 182 ----------YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
YN +I GL +A + E+ + R V P TYT ++ G CK G
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 232 GASKILKMMISRGFL 246
A ++++ M G +
Sbjct: 474 EADELIRRMKEEGII 488
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 13/305 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ K+G+ A E + + L + P+ Y+ +++G+ + + AE +
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEM--LPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +P+++T+ TL+ GYCR +RVD I+L+ EM + G+ N I Y T+I G + G
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-----------R 243
+++ + P +VT +L+ G C G L+ A ++ K M
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P TYN GK +A LY +M G PD +TY+ ++ LCK+ +LD A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
Q+ M + ++ T T LI+ C+ + D+ F +M RRG+V + +T+ L
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Query: 364 FKKRG 368
F+K G
Sbjct: 592 FRKVG 596
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 19/335 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C ++ A F K +L + PTV ++ LL+G + +A + +
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKL--GFHPTVVTFSTLLHGLCVEDRISEALDLFHQ 173
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K PNVVT+ TL+ G CR RV A+ L+ M ++G++PN I Y T++DG+ + G
Sbjct: 174 MCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229
Query: 195 FEEVSGMMERF-LVCEPGPTMVTY-----TSLVKGYCKAGDLEGASKILKMMISRGFL-P 247
++ + V P +V + T ++ G+C +G A ++L+ M+ R + P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TYN F K GK +A LY +M+ G P +TY ++ CK+++LD A +
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M +GC D+ T LI CR + D+ +M GLV + +T+ L F +
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409
Query: 368 GMTALAQKLCNVMSS------VPRSMELLDSRCKD 396
G AQ L M S V LLD C +
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDN 444
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 166/365 (45%), Gaps = 22/365 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+ R G V A+ + + + ++D +CK G +A
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRM----LEDGLQPNQITYGTIVDGMCKMGDTVSALNL 236
Query: 95 FHKRKELDQSWAPTVRVYNI-----LLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYG 148
K +E+ P V ++ + ++NG+ S +A++ EM ++ ++P+VVTY
Sbjct: 237 LRKMEEVSH-IKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ + + + A L EM GI P+ I Y+++IDG + R + M
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK 355
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P ++T+ +L+ GYC+A ++ K+L M G + + TY F + G + A
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 415
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI----------- 317
+L ++M+ SG P+ +T + LL LC KL A+++ K M+ DI
Sbjct: 416 QDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEP 475
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ T +LI L KF EA +E+M RG+VP +T+ + K+ A ++
Sbjct: 476 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMF 535
Query: 378 NVMSS 382
+ M S
Sbjct: 536 DSMGS 540
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 13/297 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D CKQ R+ AA F+ + +P + +N L+ G+ R+K V D + E
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 386
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + N +TY TL+ G+C++ ++ A L++EM G+ PN + NT++DGL + G+
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446
Query: 195 FEEVSGMMERFL-------VCEP----GPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++ M + P P + TY L+ G G A ++ + M R
Sbjct: 447 LKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 506
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TYN K ++++A ++ M ++P+ +T+ L+ CK ++D
Sbjct: 507 GIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 566
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ EM RG + T LIH ++ + A F++M+ G+ P +T + +
Sbjct: 567 LELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNM 623
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 20/295 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + TF LI Y RA V+ I +V N + L+ C+ G
Sbjct: 359 PDII---TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN----TITYTTLIHGFCQVGD 411
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE--------- 138
+ AA + + + P V N LL+G + +KDA + M+K
Sbjct: 412 LNAAQDLLQEM--VSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469
Query: 139 --NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
V P+V TY L+ G + A L +EM GI P+ I YN+VI GL + R +
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + M + P +VT+T+L+ GYCKAG ++ ++ M RG + + TY
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
F K G + A++++++M+ SG PD +T +L L +++L A+ + ++++
Sbjct: 590 HGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 46/310 (14%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR--- 171
L +G+ K ++DA + +M + P+V+ + L+ R+ R+D I L ++M
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 172 --------------------------------KEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
K G P + ++T++ GL R E
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ + +C+ P +VT+T+L+ G C+ G + A +L M+ G P+ TY
Sbjct: 169 DLFHQ--MCK--PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224
Query: 260 SKFGKVEDAMNLYRKMIE-SGYTPDRLTYHI-----LLKILCKEDKLDLAIQVSKEMKCR 313
K G A+NL RKM E S P+ + + + ++ C + A Q+ +EM R
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284
Query: 314 -GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
D+ T LI+ + KF EA +++M+ RG++P +T+ + D F K+
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA 344
Query: 373 AQKLCNVMSS 382
A+ + +M++
Sbjct: 345 AEHMFYLMAT 354
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P+++ + L+ + G L+ + + M R + ++ + F K+ A+
Sbjct: 74 PLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFAL 133
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ + K+ + G+ P +T+ LL LC ED++ A+ + +M C ++ T T L++ L
Sbjct: 134 STFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGL 189
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
CR + EA A + M+ GL P+ +T+ + D K G T A L M V
Sbjct: 190 CREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 243
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
F + +EDA++L+ M+ S P + + L+ ++ + +LD+ I + ++M+ R +
Sbjct: 53 FHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCN 112
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ T+L+ C K A + F + + G P +TF + L LC
Sbjct: 113 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTF------------STLLHGLC- 159
Query: 379 VMSSVPRSMELLDSRCK 395
V + +++L CK
Sbjct: 160 VEDRISEALDLFHQMCK 176
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 183/376 (48%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I ++ +SA+ + + PD + T+ LIR G V+ ++ F +
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDII---TYTTLIRGLCLNGQVKESL---NFHD 143
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + + L++ LCK G+ A RK + P V +YN +++G
Sbjct: 144 RL-VSQGIKLDHVSYGTLINGLCKIGQTGPALRLL--RKIEGEICRPDVVMYNTIIDGLC 200
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K V+DA + EM ++ V PNVVTY +L+ G+C + ++D+A L+ EM + + PN
Sbjct: 201 KDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVC 260
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT++DGL + G+ E ++ + GP + TY +L+ GY + A + +M
Sbjct: 261 TFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIM 320
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G +Y+ SK +++AM+L+ M PD + Y L+ LCK ++
Sbjct: 321 AQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRI 380
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A++ EM RG ++ T T LI LC+ ++ D+A A + + +G+ + T+ L
Sbjct: 381 NSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL 440
Query: 361 NDEFKKRGMTALAQKL 376
D K G AQK+
Sbjct: 441 VDGLCKDGRLTDAQKV 456
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 156/312 (50%), Gaps = 6/312 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G ++ A F N + ++KN + F L+D LCK+G+++ A
Sbjct: 226 TYTSLIYGFCIVGQLDKA---FGLLNEM-VLKNVNPNVCTFNTLVDGLCKEGKMREAKSL 281
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P V YN L++G+F K A+ + M + VT +V +Y ++ G
Sbjct: 282 VAVM--MKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGL 339
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+++ +D A+ L + MR E + P+ + Y+++IDGL ++GR ++ P +
Sbjct: 340 SKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNV 399
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYTSL+ CK+ ++ A +LK + +G + TYN K G++ DA +++
Sbjct: 400 ITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQD 459
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ G+ D +TY I++ LCKE D A+ + +M+ +GC D +I+
Sbjct: 460 LLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDM 519
Query: 335 FDEASAEFEDMI 346
D+A +MI
Sbjct: 520 NDKAEKLLREMI 531
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 45/342 (13%)
Query: 74 LFEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
++ ++D LCK V+ A E F KR P V Y L+ G+ + A
Sbjct: 191 MYNTIIDGLCKDKLVRDAFDLYCEMFEKRV------FPNVVTYTSLIYGFCIVGQLDKAF 244
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG- 188
EM +NV PNV T+ TLV+G C+ ++ A LV M KEG+ P+ YN ++DG
Sbjct: 245 GLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY 304
Query: 189 --LVEAGRFEEVSGMMERF-LVCEPG-------------------------------PTM 214
+ EAG+ + V +M + + C+ P +
Sbjct: 305 FLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDV 364
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V Y+SL+ G CK+G + A K + M RG P+ TY K +V+ A+ L +K
Sbjct: 365 VAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKK 424
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ + G + TY+IL+ LCK+ +L A +V +++ +G ++D+ T +++I+ LC+
Sbjct: 425 IKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESL 484
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
FDEA M +G VP + ++ + + F ++ M A+KL
Sbjct: 485 FDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKL 526
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 158/331 (47%), Gaps = 16/331 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++S C ++ +A F K +L + P + Y L+ G + VK++ F
Sbjct: 87 LNILINSYCHLRQINSAFSVFAKILKL--GYQPDIITYTTLIRGLCLNGQVKESLNFHDR 144
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA-- 192
+ + + + V+YGTL+ G C++ + A+RL++++ E P+ ++YNT+IDGL +
Sbjct: 145 LVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKL 204
Query: 193 --GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
F+ M E+ + P +VTYTSL+ G+C G L+ A +L M+ + P+
Sbjct: 205 VRDAFDLYCEMFEKRVF----PNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVC 260
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+N K GK+ +A +L M++ G PD TY+ L+ + A V M
Sbjct: 261 TFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIM 320
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G D+ + +++I L +M DEA FE M ++P + + L D K G
Sbjct: 321 AQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRI 380
Query: 371 ALAQKLCNVMS------SVPRSMELLDSRCK 395
A K + M +V L+D+ CK
Sbjct: 381 NSALKYVDEMHDRGQPPNVITYTSLIDALCK 411
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + + +L ++K+ + M + N +T L+ YC LR+++ A +
Sbjct: 47 PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++ K G +P+ I Y T+I GL G+ +E +R + V+Y +L+ G CK
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A ++L+ + P YN K V DA +LY +M E P+ +T
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ C +LD A + EM + + ++ T L+ LC+ K EA + M+
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ G+ P T+ L D + A+ + N+M+ +
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM 323
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 2/203 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L K + A + F + +++ P V Y+ L++G +S + A ++ E
Sbjct: 332 YSVMISGLSKMKMLDEAMDLFEGMR--NENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PNV+TY +L++ C+ +VD+AI L+K+++ +GI+ N YN ++DGL + GR
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGR 449
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + L+ +VTY+ ++ G CK + A +L M +G +P Y
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYET 509
Query: 255 FFRYFSKFGKVEDAMNLYRKMIE 277
F + + A L R+MI+
Sbjct: 510 IINAFFEKDMNDKAEKLLREMID 532
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%)
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N+ DA + M + P ++ +G ++ + + I L + M GI+ N I N
Sbjct: 29 NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I+ + + + L P ++TYT+L++G C G ++ + ++S+
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +Y K G+ A+ L RK+ PD + Y+ ++ LCK+ + A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ EM + ++ T T LI+ C + + D+A +M+ + + P+ TF L D
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268
Query: 364 FKKRGMTALAQKLCNVM 380
K G A+ L VM
Sbjct: 269 LCKEGKMREAKSLVAVM 285
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L+K K D A L + +PD V+ + LI ++G + +A+ + +
Sbjct: 335 MISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSS---LIDGLCKSGRINSALKYVDEMH 391
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ N + SL +D+LCK +V A K K DQ + YNIL++G
Sbjct: 392 DRGQPPNVITYTSL----IDALCKSHQVDKAIALLKKIK--DQGIQANMYTYNILVDGLC 445
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + DA++ + ++ + +VVTY ++ G C+ D A+ L+ +M +G P+AI
Sbjct: 446 KDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAI 505
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVC 208
Y T+I+ E ++ ++ + C
Sbjct: 506 AYETIINAFFEKDMNDKAEKLLREMIDC 533
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 7/270 (2%)
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
L R ++ PN + + L ++ AI M + P I + ++ LV+
Sbjct: 4 LRFRFHSIIPNSTLLLSHTH-FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKT 62
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ V + +R + +T L+ YC + A + ++ G+ P TY
Sbjct: 63 KHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITY 122
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
R G+V++++N + +++ G D ++Y L+ LCK + A+++ ++++
Sbjct: 123 TTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEG 182
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
C D+ +I LC+ +A + +M + + P+ +T+ L F G
Sbjct: 183 EICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDK 242
Query: 373 AQKLCNVM------SSVPRSMELLDSRCKD 396
A L N M +V L+D CK+
Sbjct: 243 AFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 184/380 (48%), Gaps = 11/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ VL + ++F+S ++ +G ++ +TF I I+ +A A + A+ FE
Sbjct: 275 MMSVLGRTRQFES----MMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMK 330
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NFD+G LLD+L GR K E ++L+ + P +R Y +LLNGW
Sbjct: 331 RY----NFDAGVDTINCLLDNL---GRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWC 383
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R KN+ +A R W EM + P+++ + T++EG + ++ AI+L + M+ +G PN
Sbjct: 384 RIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVR 443
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I L + + +E + + P YT L+ G+ ++ +LK M
Sbjct: 444 TYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEM 503
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G TYN + + +DA+ +Y+KMI++G P TY++++K
Sbjct: 504 KEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNY 563
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ V KEM +GC D ++ + I L R + +EA E+MI +G+ L + +
Sbjct: 564 EMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKF 623
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+F + G + ++L M
Sbjct: 624 AADFSRAGKPDILEELARKM 643
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 43/220 (19%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM----ERFLVCEPGPTMVTYTSLVKGYCK 226
+K G N+ YN ++ L +FE + GM+ E+ L+ TM T++ +K +
Sbjct: 261 QKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-----TMETFSIAIKAFAA 315
Query: 227 AGDLEGASKILKMM----------------------------------ISRGFLPSPTTY 252
A + + A + ++M + F P+ TY
Sbjct: 316 AKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTY 375
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ + + +A + +MI+ G+ PD + +H +L+ L K K AI++ + MK
Sbjct: 376 TVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKA 435
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+G ++ T T+LI LC+ K EA F++M+ G P
Sbjct: 436 KGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQP 475
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 180/393 (45%), Gaps = 14/393 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ + A+ ++F+SAW L+ P S T IL RYA G A+ TF +
Sbjct: 108 VDIAARMRDFNSAWALVGRMRSLRLGP---SPKTLAILAERYASIGKPHRAVRTFLSMHE 164
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ ++ S F LLD LCK RV+ A + + L + P YNIL NG+
Sbjct: 165 HGLHQDLHS----FNTLLDILCKSNRVETAHDLL---RTLKSRFRPDTVSYNILANGYCL 217
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
K A R EM + + P +VTY T+++GY R ++ A EM+K E + +
Sbjct: 218 KKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVS 277
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y TVI G EAG ++ + + + P + TY +L++ +CK ++ A + + M+
Sbjct: 278 YTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMV 337
Query: 242 SRGFL-PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ T+N R G +E A+ +M E G TY+++++ C ++
Sbjct: 338 REGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEI 397
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGLVPHYLTF 357
+ ++V +M C +LDT +LI + K ++ A +M+ RG +P TF
Sbjct: 398 EKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTF 457
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
R+ + G A+ + + S R + L
Sbjct: 458 NRVLNGLVITGNQDFAKDILRMQSRCGRVVRRL 490
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 166/359 (46%), Gaps = 20/359 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ +AG ++ AI + + +V N + + +++D LCK+G+V A
Sbjct: 342 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT----YTVMVDGLCKEGKVAEADNV 397
Query: 95 FH-------KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
K EL +Y L++G F + N + A +M+ + + +V Y
Sbjct: 398 LSLMERGGVKANEL---------LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLY 448
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
GTL+ G C+ ++VD A L+ +M G+ PN ++Y T++D L +AG+ E ++ + L
Sbjct: 449 GTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILD 508
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY +L+ G CKAG + A M G P+ Y F K G +
Sbjct: 509 SGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNK 568
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AM+L +MI+ G + D++ Y L+ K+ L A + +M G +DL T I
Sbjct: 569 AMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFIS 628
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRS 386
C M EA +MI G+ P + L +++K G A L N M SV S
Sbjct: 629 GFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESVLSS 687
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I++D LCK+G + A F + K + +P V YN L++G+ + ++++ E+ E
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAM--GCSPDVVTYNSLIDGYGKCGDLEEVEQLVSE 260
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MRK +VVTY L+ + + R+++A EM+++G+ N + ++T +D + G
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGL 320
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + V P TYTSLV G CKAG L+ A +L M+ +G +P+ TY
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 380
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV +A N+ M G + L Y L+ + + A+ + +MK +G
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG----MT 370
++D+ LI LC+ K DEA + M GL P+ + + + D K G
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500
Query: 371 ALAQKLCN--VMSSVPRSMELLDSRCK 395
AL K+ + +V L+D CK
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCK 527
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 124/256 (48%), Gaps = 4/256 (1%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ DA R +R+ V PN T ++ RL R +R LV+ + PN +N
Sbjct: 150 LDDAVRALARVRQLRVPPNTRTCNHIL---LRLAR-NRQGGLVRRLFDLLPVPNVFTFNI 205
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
VID L + G E + R P +VTY SL+ GY K GDLE +++ M G
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
TYN FSKFG++E A + + +M G + +T+ + CKE + A+
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM 325
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ +M+ RG + T T L+ C+ + D+A ++M+ +GLVP+ +T+ + D
Sbjct: 326 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 385
Query: 365 KKRGMTALAQKLCNVM 380
K G A A + ++M
Sbjct: 386 CKEGKVAEADNVLSLM 401
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S+ + LL L G + A + ++L P R N +L R++ R +
Sbjct: 135 SVVDTLLSLLADHGLLDDAVRALARVRQL--RVPPNTRTCNHILLRLARNRQGGLVRRLF 192
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+ PNV T+ +++ C+ + A L M+ G P+ + YN++IDG +
Sbjct: 193 DLLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 248
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G EEV ++ +VTY +L+ + K G +E A M +G + + T+
Sbjct: 249 GDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTF 308
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ F F K G V++AM L+ +M G P+ TY L+ CK +LD AI + EM
Sbjct: 309 STFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 368
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G ++ T T+++ LC+ K EA M R G+ + L + L
Sbjct: 369 QGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTL 416
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 175/349 (50%), Gaps = 14/349 (4%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
D F I I+ +A AG ++ A+ FE FD G F LL +L ++G + A++
Sbjct: 2 DAFKIAIKSFAAAGEIKNAVGVFEMMR----THGFDDGVESFNCLLVALAQEGLGREANQ 57
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + ++ +AP +R Y L+ W ++N+ +A R W EM + + P+VV + T++EG
Sbjct: 58 VFDRMRD---RYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEG 114
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
R +R A+++ + M+ +G PN Y +I + G+ + E P
Sbjct: 115 LLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPD 174
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TYT L+ GY A ++ + +L+ M +G P TYN + + +DA +Y+
Sbjct: 175 VATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYK 234
Query: 274 KMIESGYTPDRLTYHILLK--ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
KMI+ G P TY++++K L + + + V +EM +G D+++ T+ I+ R
Sbjct: 235 KMIKKGLEPTIHTYNMMMKSYFLGGRNYM-MGCAVWEEMHRKGICPDVNSYTVFINGHIR 293
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG----MTALAQKL 376
+ +EA E+MI++G+ + + + +F K G + LAQK+
Sbjct: 294 HGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYELAQKV 342
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 120/287 (41%), Gaps = 24/287 (8%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V +T + + R R A+ FE L K + +L+ CK+G+
Sbjct: 103 PDVVVHNTMIEGLLRGQRR---PEAVKMFE----LMKAKGPAPNVWTYTMLIRDHCKRGK 155
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A F + + D P V Y LL G+ +K + EM ++ P+ TY
Sbjct: 156 MDMAMRCFEEMQ--DVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTY 213
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--------FEEVS 199
L++ D A R+ K+M K+G+EP YN ++ GR +EE
Sbjct: 214 NALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEE-- 271
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
M R +C P + +YT + G+ + G E A K ++ MI +G YN F F
Sbjct: 272 --MHRKGIC---PDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADF 326
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
SK GK + L +K+ +G +H + + K K ++ Q
Sbjct: 327 SKAGKPDILYELAQKVKFTGKFDASNVFHQWAERMKKRVKRNVPNQT 373
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
M + +K + AG+++ A + +MM + GF ++N ++ G +A ++
Sbjct: 1 MDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFD 60
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M + Y PD +Y L+ C L A +V EM G D+ +I L R
Sbjct: 61 RMRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQ 119
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ EA FE M +G P+ T+ L + KRG +A + M V
Sbjct: 120 RRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDV 169
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 162/311 (52%), Gaps = 41/311 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---XDMWVLMIDSYGKAGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYDALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ +N+ PNVVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E +++ L
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLD 283
Query: 208 CEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT + L+ CKAG+L+ A+ +LK MI Y + K G+ +
Sbjct: 284 KYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYD 343
Query: 267 DAMNLYRKMIE 277
A+ L K+IE
Sbjct: 344 QAVKLLDKLIE 354
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + ++ V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P ++TY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M + P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + + K G A KL +
Sbjct: 325 EAGHYGVLIENYCKAGQYDQAVKLLD 350
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 111/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P+ +TY L+K D++
Sbjct: 177 KSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAP 288
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 136/294 (46%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGAKNAEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK + + ++ T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + L ++ S M L+ S+CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCK 303
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 134/295 (45%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P+ V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGKNIEPNVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ LD+ APT ++ L++
Sbjct: 248 GYGIKPN----AITYSTLLPGLCNAEKMSEARSIL--KEMLDKYIAPTDNSIFMRLISSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ N+ A M + +V YG L+E YC+ + D+A++L+ ++ ++ I
Sbjct: 302 CKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHMEPSA--YNXMIEYLCNNGQXAKAETLVRQLLKLGVQDPTALN--TLIRGHSREG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPXDAKAALDSMIENDHLPD 472
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 12/333 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ + V Y AG ++AA L + A + L+ LC +GR
Sbjct: 124 PDVMAYNAMVA---GYCGAGQLDAA-------RRLVAEMPVEPDAYTYNTLIRGLCGRGR 173
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A + L + P V Y ILL + K A + EMR + TP++VTY
Sbjct: 174 TANALAVLDEM--LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY 231
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+V G C+ RVD AI +K + G EPN + YN V+ GL A R+E+ +M
Sbjct: 232 NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ 291
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VT+ L+ C+ G +E A ++L+ + G P+ +YN F K K++
Sbjct: 292 KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 351
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AM M+ G PD ++Y+ LL LC+ ++D+A+++ ++K +GC L + +I
Sbjct: 352 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 411
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
L + K EA +M+ +GL P +T+ +
Sbjct: 412 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 172/357 (48%), Gaps = 11/357 (3%)
Query: 27 VPDFVSKDTFVILIRRYA-RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
VPD V T+ IL+ R+G +A E + K + ++++ +C++
Sbjct: 190 VPDVV---TYTILLEATCKRSGYKQAMKLLDEMRD-----KGCTPDIVTYNVVVNGICQE 241
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GRV A E+ P YNI+L G ++ +DAE EM ++ PNVV
Sbjct: 242 GRVDDAIEFLKNLPSY--GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ L+ CR V+ A+ +++++ K G PN++ YN ++ + + ++ ++
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +V+Y +L+ C++G+++ A ++L + +G P +YN +K GK
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++A+ L +M+ G PD +TY + LC+ED+++ AI+ +++ G + +
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
I LC+ + A F MI G +P+ T+ L + G+ A+ L + + S
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 536
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 118/226 (52%), Gaps = 3/226 (1%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+V+ Y +V GYC ++D A RLV EM +EP+A YNT+I GL GR +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
++ L P +VTYT L++ CK + A K+L M +G P TYN +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G+V+DA+ + + G P+ ++Y+I+LK LC ++ + A ++ EM +GC ++ T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
MLI LCR + A E + + G P+ L++ L F K+
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 346
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 157/332 (47%), Gaps = 9/332 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD V T+ +++ + G V+ AI EF NL + S + I+L LC
Sbjct: 225 TPDIV---TYNVVVNGICQEGRVDDAI---EFLKNLPSYGCEPNTVS-YNIVLKGLCTAE 277
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R + A E + + + P V +N+L++ R V+ A ++ K TPN ++
Sbjct: 278 RWEDAEELMGEMGQ--KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ +C+ +++D+A+ + M G P+ + YNT++ L +G + ++ +
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +++Y +++ G KAG + A ++L M+S+G P TY+ + ++E
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
DA+ + K+ + G P+ + Y+ ++ LCK + AI + M GC + T T+LI
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L EA +++ RG+V L K
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGVVRKSLINK 547
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 141/290 (48%), Gaps = 4/290 (1%)
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A+ R+ L + P V YN ++ G+ + + A R EM V P+ T
Sbjct: 105 KLSASGRTAEARRVL-AACGPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYT 160
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G C R A+ ++ EM + P+ + Y +++ + +++ +++
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +V G C+ G ++ A + LK + S G P+ +YN + + E
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
DA L +M + G P+ +T+++L+ LC++ ++ A++V +++ GC + + L+
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
H C+ K D+A A + M+ RG P +++ L + G +A +L
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 390
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R +D A+RLV R+ P+A +I L +GR E R ++ GP ++
Sbjct: 77 RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEA-----RRVLAACGPDVM 127
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
Y ++V GYC AG L+ A +++ M P TYN R G+ +A+ + +M
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEM 184
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ PD +TY ILL+ CK A+++ EM+ +GC D+ T ++++ +C+ +
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 244
Query: 336 DEASAEFEDMIRRGLVPHYLTFK 358
D+A +++ G P+ +++
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSYN 267
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L ++ E D A LL P +S +T +I +AG + A+ E N
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT---VIDGLTKAGKTKEAL---ELLN 427
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + K + + LC++ R++ A F K + D P +YN ++ G
Sbjct: 428 EM-VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ--DMGIRPNTVLYNAIILGLC 484
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + A + M PN TY L+EG + A L+ E+ G+ ++
Sbjct: 485 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 544
Query: 181 VYNTVI 186
+ I
Sbjct: 545 INKGAI 550
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 11/357 (3%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
VL +A+ F W LL PD V+ T +I++ R A+ V + +F L
Sbjct: 119 VLGRARRFPHMWDLL--ATTRRICPDAVTSRTAMIVLGRVAKVCSVHETVASFR---RLA 173
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ + A LF LL +LC++ + A FH L + +NILL+GW K
Sbjct: 174 RMFHAVDPACLFNALLRTLCQEKSMSDARNVFHA---LKYDFRVNRHTFNILLSGW---K 227
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +DAE F EMR+ V P++VTY +L++ +C+ R V++A +L+ EMR++ I P+ I Y
Sbjct: 228 SAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYT 287
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL G+ ++ +++ P + Y + ++ + A L A ++ M S+
Sbjct: 288 SLIGGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASK 347
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P+PTTYN FFR + + LY +M G P+ + ++++ + K+ A
Sbjct: 348 GLMPNPTTYNLFFRCYYWAFDIGSTWRLYERMRSEGCFPNTQSCMFIIRLCHRYGKVGQA 407
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ +M S +L LLC K +E F M+ G P + F+R+
Sbjct: 408 LELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLEEVERCFCQMVEFGQKPSNVAFRRI 464
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 171/355 (48%), Gaps = 42/355 (11%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LI+ Y G V +A+ F+ + + N ++F +L++ K G V+ A+E + +
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPN----VAIFSVLIEWCSKIGNVEKANELYTRM 388
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKN---------------------------------- 124
K + PTV + N LL G FR +N
Sbjct: 389 KCM--GLQPTVFILNFLLKG-FRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELG 445
Query: 125 -VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V +A W +M + +TP++V+Y ++ G+C+ +D A ++ + + G++PNAI Y
Sbjct: 446 KVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYT 505
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+++G + G E M ++ + PT T+ S++ G CK G + A L I +
Sbjct: 506 ILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ 565
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
F+P+ TYN + K G ++ A ++YR+M S +P+ +TY L+ CK +K+DLA
Sbjct: 566 SFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLA 625
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+++ +MK +G ++D+ LI C+M + A F ++ GL P+ + +
Sbjct: 626 LKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYN 680
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 37/286 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ LCK GRV A + + + QS+ PT YN +++G+ + + AE + E
Sbjct: 539 FNSIINGLCKVGRVSEARDKLNTF--IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYRE 596
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++PNV+TY +L+ G+C+ ++D A+++ +M+++G+E + VY T
Sbjct: 597 MCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYAT---------- 646
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
L+ G+CK D+E A K ++ G P+ YN
Sbjct: 647 -------------------------LIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNI 681
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ +E A+NL+++MI + D Y L+ L KE KL A+ + EM CRG
Sbjct: 682 MISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRG 741
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ +LI+ LC + + A ++M + P L + L
Sbjct: 742 IVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTL 787
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK+G + A E + ++ P Y IL+ G F+ + + A + +M + P
Sbjct: 477 CKKGCMDDAHEVMNGI--IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVP 534
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
T+ +++ G C++ RV A + K+ P ++ YN +IDG V+ G + +
Sbjct: 535 TDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVY 594
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E P ++TYTSL+ G+CK+ ++ A K+ M +G T Y F K
Sbjct: 595 REMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKM 654
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+E+A + K++E G TP+ + Y+I++ + ++ A+ + KEM DL
Sbjct: 655 QDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIY 714
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T LI L + K A + +M+ RG+VP + L + G A K+
Sbjct: 715 TSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKI 768
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 38/344 (11%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S + +F LL S + ++ A E F R L+ P V N+LL R V+DA
Sbjct: 150 SDSRVFNYLLISYVRANKITEAVECF--RAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAH 207
Query: 130 RFWLEMRKENVTPNVVT-----------------------------------YGTLVEGY 154
R + EM + + + T Y +++
Sbjct: 208 RLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAV 267
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR +D A +LV+ + G P+ Y VI V G F E + + + +
Sbjct: 268 CRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNV 327
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TSL+KGYC GD+ A ++ ++ G P+ ++ + SK G VE A LY +
Sbjct: 328 AVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTR 387
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G P + LLK K++ L+ A + G + T +++ LC + K
Sbjct: 388 MKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGK 446
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+EA ++ MI +G+ P +++ + K+G A ++ N
Sbjct: 447 VNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMN 490
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 98 RKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
KE+ + P +++Y L++G + + A + EM + P++ Y L+ G C
Sbjct: 699 HKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCN 758
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
+++ A +++KEM I P ++YNT+I G + G +E + + L P T
Sbjct: 759 HGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTT 818
Query: 217 YTSLVKG 223
Y LV G
Sbjct: 819 YDILVNG 825
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 228 GDLEGASKILKMMISR-----GF-LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
GD A+K+L ++ GF L +NY + + K+ +A+ +R M+E G
Sbjct: 125 GDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVV 184
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P ++LL + + + ++ A ++ EM R D T +L+ + KF EA
Sbjct: 185 PWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERY 244
Query: 342 FEDMIRRGL 350
F RGL
Sbjct: 245 FGQAAGRGL 253
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 6/297 (2%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+ TV +NI++N + +K A F M PNVV+Y T++ GY ++ A R
Sbjct: 224 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 283
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ MR +GIEP++ Y ++I G+ + GR EE SG+ ++ + P VTY +L+ GYC
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 343
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
GDLE A M+ +G +PS +TYN G++ +A ++ ++M + G PD +
Sbjct: 344 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+IL+ + A + EM +G + T T LI++L R + EA FE +
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPRS----MELLDSRCKD 396
+ +G+ P + F + D G A L M SVP L+ RC++
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 37/329 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I+++ LCK+G++K A E+ + L + P V YN +++G+ N++ A R
Sbjct: 230 FNIMVNVLCKEGKLKKAREFIGFMEGL--GFKPNVVSYNTIIHGYSSRGNIEGARRILDA 287
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG------ 188
MR + + P+ TYG+L+ G C+ R++ A L +M + G+ PNA+ YNT+IDG
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 347
Query: 189 -------------------------LVEA----GRFEEVSGMMERFLVCEPGPTMVTYTS 219
LV A GR E M++ P +TY
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GY + G+ + A + M+S+G P+ TY S+ ++++A +L+ K+++ G
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+PD + ++ ++ C ++ A + KEM + D T L+ CR K +EA
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++M RRG+ P ++++ L + +RG
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGRRG 556
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 158/326 (48%), Gaps = 6/326 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G +E A F+ + +V N A + L+D C +G ++ A Y
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN----AVTYNTLIDGYCNKGDLERAFSY 354
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + + P+V YN+L++ F + +A+ EMRK+ + P+ +TY L+ GY
Sbjct: 355 --RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 412
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R +A L EM +GIEP + Y ++I L R +E + E+ L P +
Sbjct: 413 SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 472
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+ + ++V G+C G++E A +LK M + P T+N + + GKVE+A L +
Sbjct: 473 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD ++Y+ L+ + + A +V EM G + L T LI LC+ +
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++M+ +G+ P T+ L
Sbjct: 593 GDLAEELLKEMVNKGISPDDSTYLSL 618
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 11/301 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
VP+ V+ +T LI Y G +E A F+ +MVK S + +L+ +L +
Sbjct: 329 VPNAVTYNT---LIDGYCNKGDLERA-----FSYRDEMVKKGIMPSVSTYNLLVHALFME 380
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+ A + + ++ + P YNIL+NG+ R N K A EM + + P V
Sbjct: 381 GRMGEADDMIKEMRK--KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY +L+ R R+ A L +++ +G+ P+ I++N ++DG G E +++
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P VT+ +L++G C+ G +E A +L M RG P +YN + + G +
Sbjct: 499 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 558
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA + +M+ G+ P LTY+ L+K LCK + DLA ++ KEM +G D T L
Sbjct: 559 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618
Query: 326 I 326
I
Sbjct: 619 I 619
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 35/224 (15%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+ + LV C LRR D A + M+++GI P N ++ ++ R E +
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
T+ T+ +V CK G L+ A + + M GF P+ +YN +S G
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+E A + M G PD TY
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTY-----------------------------------GS 302
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI +C+ + +EAS F+ M+ GLVP+ +T+ L D + +G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 346
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
+ KE D + +LD+ PD + F ++ + G VE A F +D K
Sbjct: 452 RMKEADDLFEKILDQ---GVSPDVI---MFNAMVDGHCANGNVERA---FMLLKEMDR-K 501
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+ F L+ C++G+V+ A + K + P YN L++G+ R ++K
Sbjct: 502 SVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKR--RGIKPDHISYNTLISGYGRRGDIK 559
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA R EM P ++TY L++ C+ + D A L+KEM +GI P+ Y ++I
Sbjct: 560 DAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619
Query: 187 DGL 189
+G+
Sbjct: 620 EGM 622
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 182/387 (47%), Gaps = 19/387 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+IK L +A + +A L+L+++ H V PD + TF L++ + G +EAA+
Sbjct: 201 LIKALCRAHQVRTA-VLMLEEMSSHAVAPD---ETTFTTLMQGFIEEGSIEAALRV---- 252
Query: 60 NNLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
K ++G S +L++ CK GRV+ A Y +KE+ + P YN
Sbjct: 253 ----KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYI--QKEIADGFEPDQVTYNTF 306
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++ ++ +V A + M +E P+V TY T++ + +D A +V +M G
Sbjct: 307 VHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 366
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ +NT+I L R EE + V P + T+ L+ CK GD +
Sbjct: 367 LPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ + M S G P TYN + GK+ +A++L ++M +G +TY+ ++ LC
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ +++ A +V +M G T LI LC+ + D+A+ E M++ GL P +
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSS 382
T+ + + K+G A + M++
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTA 573
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 1/317 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ ++GA + ++S + R A + + A T VYN LLN +
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTA-VYNHLLNVLAEGSRM 176
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K E + EM + P+VVT TL++ CR +V A+ +++EM + P+ + T+
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ G +E G E + + + PT VT L+ GYCK G +E A ++ I+ GF
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TYN F + G V A+ + M++ G+ PD TY+ ++ L K +LD A
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ +M RGC D T LI LC + +EA ++ +GL P TF L +
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416
Query: 366 KRGMTALAQKLCNVMSS 382
K G L +L M S
Sbjct: 417 KVGDPHLGIRLFEEMKS 433
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 158/324 (48%), Gaps = 8/324 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ +LC+ +V+ A + + AP + L+ G+ +++ A R +M +
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSS--HAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMME 258
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+P VT L+ GYC++ RV+ A+ +++ +G EP+ + YNT + L + G
Sbjct: 259 TGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSH 318
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+M+ L P + TY +++ K G+L+ A I+ M+ RG LP TT+N
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
++E+A++L R++ G +PD T++IL+ LCK L I++ +EMK GC
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D T +LI LC M K A ++M G +T+ + D K+ A+++
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Query: 378 NVMSS--VPRSM----ELLDSRCK 395
+ M + + RS L+D CK
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCK 522
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 174/370 (47%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K E D A ++ + +PD + +T ++ + R +E A+ + A
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR---LEEAL---DLAR 394
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L VK F IL+++LCK G F + K AP YNIL++
Sbjct: 395 EL-TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS--SGCAPDEVTYNILIDHLC 451
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A EM + VTY T+++ C+ R++ A + +M GI +A+
Sbjct: 452 SMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAV 511
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL +A R ++ + ++E+ + P+ +TY S++ YCK GDL+ A+ IL+ M
Sbjct: 512 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K G+ + A+ L R M G P Y+ +++ L + + L
Sbjct: 572 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 631
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M+ +G +P + +F+
Sbjct: 632 RDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 691
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 692 LAEGLLNLGM 701
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 137/319 (42%), Gaps = 37/319 (11%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL +L +Q +AA + + + +AP+ VY ++ + E EMR+
Sbjct: 59 LLTALREQADPEAALQMLNSALA-REDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK----------------------------- 168
E + VE Y RLRR D A+ LV+
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMK 177
Query: 169 -------EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
EM GI+P+ + NT+I L A + M+E P T+T+L+
Sbjct: 178 LLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLM 237
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
+G+ + G +E A ++ M+ G P+ T N + K G+VEDA+ +K I G+
Sbjct: 238 QGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE 297
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD++TY+ + LC+ + A++V M G D D+ T +I+ L + + DEA
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357
Query: 342 FEDMIRRGLVPHYLTFKRL 360
M+ RG +P TF L
Sbjct: 358 VNQMVDRGCLPDTTTFNTL 376
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 186/391 (47%), Gaps = 26/391 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L A +++ A+ ++ + IG +PD T+ ++ A +E A FE
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPD---TSTYSKVLGYLCNASKMELAFLLFEEMKRG 512
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+V + + + I++DS CK G ++ A ++F++ +E+ P V Y L++ + ++
Sbjct: 513 GLVADVYT----YTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKA 566
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M E PN+VTY L++G+C+ ++++A ++ + M
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMY 626
Query: 171 -----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
PN ++Y ++DG + R EE +++ + P + Y +L+ G C
Sbjct: 627 FKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 686
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G L+ A ++ M GF + TY+ + K + + A + KM+E+ P+ +
Sbjct: 687 KVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 746
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
Y ++ LCK K D A ++ + M+ +GC ++ T T +I R+ K + E M
Sbjct: 747 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM 806
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+G+ P+Y+T++ L D K G +A L
Sbjct: 807 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 837
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 163/354 (46%), Gaps = 25/354 (7%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ F S + +L LC +++ A F + K V Y I+++ + ++ +
Sbjct: 477 QGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKR--GGLVADVYTYTIMVDSFCKAGLI 534
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ A +++ EMR+ TPNVVTY L+ Y + ++V A L + M EG PN + Y+ +
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 186 IDGLVEAGRFEEVSGMMERFLVCE--PG---------------PTMVTYTSLVKGYCKAG 228
IDG +AG+ E+ + ER + P P +V Y +L+ G+CK
Sbjct: 595 IDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLH 654
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+E A K+L M G P+ Y+ K GK+++A + +M E G+ TY
Sbjct: 655 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYS 714
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ K + DLA +V +M C ++ T +I LC++ K DEA + M +
Sbjct: 715 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 774
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCKD 396
G P+ +T+ + D F + G +L M S P + L+D CK+
Sbjct: 775 GCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 828
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 187/412 (45%), Gaps = 61/412 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF-- 58
+I KAK+ A L + +P+ V T+ LI + +AG +E A FE
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIV---TYSALIDGHCKAGQMEKACQIFERMC 615
Query: 59 ----ANNLDM-VKNFDSGAS------LFEILLDSLCKQGRVKAASEYFHKRKELD----Q 103
++DM K +D S ++ LLD CK RV+ A RK LD +
Sbjct: 616 GSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEA------RKLLDAMSME 669
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
P VY+ L++G + + +A+ EM + + TY +L++ Y +++R D A
Sbjct: 670 GCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 729
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+++ +M + PN ++Y +IDGL + G+ +E +M+ P +VTYT+++ G
Sbjct: 730 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 789
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------ 271
+ + G +E ++L+ M S+G P+ TY + K G ++ A NL
Sbjct: 790 FGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 849
Query: 272 ---YRKMIES------------------GYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
YRK+IE P Y +L+ L K +L++A+++ +E+
Sbjct: 850 AAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV 909
Query: 311 KCRGCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +ST LI LC K D+A F +M ++G++P TF L
Sbjct: 910 ATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSL 961
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 143/333 (42%), Gaps = 11/333 (3%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+NF + L+ LC+ + A ++ ++ + S P V Y+ LL G K
Sbjct: 295 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA--TSCLPNVVTYSTLLCGCLNKKQ 352
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +R M E P+ + +LV YC A +L+K+M K G P +VYN
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNI 412
Query: 185 VIDGL------VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+I + + E L + +S + C AG E A +++
Sbjct: 413 LIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI +GF+P +TY+ Y K+E A L+ +M G D TY I++ CK
Sbjct: 473 EMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ A + EM+ GC ++ T T LIH + K A+ FE M+ G +P+ +T+
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
L D K G +K C + + S ++ D
Sbjct: 593 ALIDGHCKAGQM---EKACQIFERMCGSKDVPD 622
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 139/353 (39%), Gaps = 46/353 (13%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
+L+ C+ G A E + K D + P+ YN L+ + ++ + A
Sbjct: 200 GEFLNVLVRKYCRSGSFSIALEELGRLK--DFRFRPSRSTYNCLIQAFLKADCLDSASLV 257
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM N+ + T C++ + A+ L M E P+ + Y +I GL E
Sbjct: 258 HREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCE 314
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A FEE + R P +VTY++L+ G L ++L MM+ G PSP
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL-------------------- 291
+N + G A L +KM++ G+TP + Y+IL+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEK 434
Query: 292 ---------------------KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ LC K + A V +EM +G D T + ++ LC
Sbjct: 435 AYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLC 494
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
K + A FE+M R GLV T+ + D F K G+ A+K N M V
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 37/300 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D LCK G++ A E K + + + T+ Y+ L++ +F+ K A +
Sbjct: 677 VYDALIDGLCKVGKLDEAQEV--KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 734
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + PNVV Y +++G C++ + D A +L++ M ++G +PN + Y +IDG G
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E ++ER P VTY L+ CK G L+ A +L+ M + Y
Sbjct: 795 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYR 854
Query: 254 YFFRYFSK-----------FGKVEDA--MNLYRKMIESGYTPDRL--------------- 285
F+K G+ + A ++LYR ++++ RL
Sbjct: 855 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSA 914
Query: 286 -------TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
TY+ L++ LC +K+D A ++ EM +G ++ T LI L R K EA
Sbjct: 915 TLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEA 974
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D LCK G+ A + +E + P V Y +++G+ R ++
Sbjct: 747 IYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQPNVVTYTAMIDGFGRIGKIETCLELLE 804
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR-------------------KEG 174
M + V PN VTY L++ C+ +D A L++EM+ KE
Sbjct: 805 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEF 864
Query: 175 IE--------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV----T 216
IE P +Y ++D L++A R E ++E V T+V T
Sbjct: 865 IESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEE--VATFSATLVDYSST 922
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
Y SL++ C A ++ A ++ M +G +P T+ + + K+ +A+ L
Sbjct: 923 YNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLL 977
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
MI L K + D A+ L+ +++ G P+ V T+ +I + R G +E + E
Sbjct: 751 MIDGLCKVGKTDEAYKLMQMMEEKGCQ--PNVV---TYTAMIDGFGRIGKIETCLELLER 805
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + N+ + + +L+D CK G + A + K+ W Y ++ G
Sbjct: 806 MGSKGVAPNYVT----YRVLIDHCCKNGALDVAHNLLEEMKQ--THWPTHAAGYRKVIEG 859
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR--KEGIE 176
+ +K ++ E+ +++ P + Y LV+ + +R++ A+RL++E+ +
Sbjct: 860 F--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLV 917
Query: 177 PNAIVYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ YN++I+ L A + F S M ++ ++ P M T+ SL+KG
Sbjct: 918 DYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVI----PEMQTFCSLIKG 964
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 173/346 (50%), Gaps = 8/346 (2%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGR 87
F+ K+ F+++ R Y +A + E AI F MV F ++ F +L+ + ++G
Sbjct: 97 FIEKN-FILVFRAYGKAHLPEKAIELFG-----RMVDEFQCRRTVRSFNSVLNVIIQEGL 150
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A E++ + +P V +N+++ + V A + EM + P+V TY
Sbjct: 151 FHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTY 210
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++G C+ R+D A+ L+ EM+ EG P+++ +N +I+GL + G V+ +++ +
Sbjct: 211 CTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 270
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +++ G C G L+ A +L M++ +P+ TY K G+ D
Sbjct: 271 KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVD 330
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
++L + E G+ + Y L+ L KE+K + A+ + K+M +GC ++ + LI
Sbjct: 331 GVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALID 390
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
LCR K DEA +M+ +G P+ T+ L F K G + A
Sbjct: 391 GLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 149/315 (47%), Gaps = 25/315 (7%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ L KQGR +E + Y+ L++G F+ + ++A W +
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEE--RGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 372
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ PN+V Y L++G CR ++D A ++ EM +G PNA Y+++I G + G
Sbjct: 373 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 432
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P + Y+ L+ G C+ G L A + M+ RG P Y+
Sbjct: 433 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 492
Query: 255 FFRYFSKFGKVEDAMNLYRKMI--ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
G VE + L+ +M+ ES PD +TY+ILL+ LCK++ + AI + M
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552
Query: 313 RGCDIDLDTSTMLIH------------------LLCRMYKFDE---ASAEFEDMIRRGLV 351
RGC+ DL T + ++ L+ R++K A+ E M+++ L
Sbjct: 553 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 612
Query: 352 PHYLTFKRLNDEFKK 366
P+ T++R+ E K
Sbjct: 613 PNASTWERIIPELCK 627
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 4/308 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L++ LCK+G + ++ + P YN ++NG + A
Sbjct: 245 FNVLINGLCKKGDMVRVTKLVDNM--FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 302
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PN VTYGTL+ G + R + L+ + + G N Y+T+I GL + +
Sbjct: 303 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 362
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE G+ ++ + P +V Y++L+ G C+ G L+ A +IL M+++G P+ TY+
Sbjct: 363 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 422
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K G + A+ ++++M ++ P+ + Y +L+ LC++ KL A+ + M RG
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 482
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI--RRGLVPHYLTFKRLNDEFKKRGMTAL 372
D+ + +IH LC + F +M+ P +T+ L K+ +
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 542
Query: 373 AQKLCNVM 380
A L N M
Sbjct: 543 AIDLLNSM 550
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 60/251 (23%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ L+D LC++G++ A E + +++ P Y+ L+ G+F++ N + A R W
Sbjct: 384 VYSALIDGLCREGKLDEAKEILCEM--VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK 441
Query: 134 EMRKENVTPN-----------------------------------VVTYGTLVEGYCRLR 158
EM K N PN VV Y +++ G C
Sbjct: 442 EMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 501
Query: 159 RVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
V+ ++L EM ++ +P+ + YN ++ L + ++ L P ++T
Sbjct: 502 SVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 561
Query: 217 YT---------------------SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
LV K + GA+KI+++M+ + P+ +T+
Sbjct: 562 CNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERI 621
Query: 256 FRYFSKFGKVE 266
K KV+
Sbjct: 622 IPELCKPKKVQ 632
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 162/335 (48%), Gaps = 6/335 (1%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
F +LIR Y R GMV A+ TF ++ F+ +LL L K+ +V A
Sbjct: 99 SVFDLLIRVYLREGMVGDALETFRLMG----IRGFNPSVYTCNMLLGKLVKERKVGAVWL 154
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+F ++ L + P V +NIL+N +K A +M + P+VVTY T++
Sbjct: 155 FF--KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNW 212
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC+ R A+ L+ +M +GIE +A YN ++D L + R + ++++ P
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPN 272
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+TY S++ G+ K G + A++I + M LP+ TYN G E A+ +
Sbjct: 273 EITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILE 332
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M +G P+ ++Y LL LC+ K +L+ + + M+ G + T +I LCR
Sbjct: 333 MMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNG 392
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+E+ + M++ G+VP +TF L + F + G
Sbjct: 393 LLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVG 427
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 159/369 (43%), Gaps = 41/369 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I + + G + AA F+ + L+++ N + L+D C G + A
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPN----CVTYNALIDGHCHDGNFEQALTI 330
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P Y+ LLNG R + ++ MR + + Y +++G
Sbjct: 331 LEMMEATGPK--PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGL 388
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR ++ +++L+ +M K+G+ P+ + ++ +I+G G+ + V ++ + P
Sbjct: 389 CRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNS 448
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN----------------YFFRY 258
+ YT+L+ YCK GD+ A K+ M G+ + N YFF +
Sbjct: 449 IIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHH 508
Query: 259 FSKFGKVED-------------------AMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
SK G V + A +++ +MI++G+ P TY LLK LC+ K
Sbjct: 509 MSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGK 568
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A ++ ++ +D T ++ + +A A F++M++R ++P T+
Sbjct: 569 FKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAI 628
Query: 360 LNDEFKKRG 368
+ +RG
Sbjct: 629 IFAGLIRRG 637
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 183/435 (42%), Gaps = 44/435 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--- 57
++K L +A +F A LLDK+ H +P V T+ ++ ++GM+ A+ F+
Sbjct: 559 LLKALCRAGKFKEAK-RLLDKL--HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMV 615
Query: 58 -----------------------------FANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
F NL ++ +D L + G+
Sbjct: 616 QRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQS 675
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFR-SKNVKDAERFWLEMRKENVTPNVVTY 147
KAA YF + E + A + N++LNG+ R K K + F + ++P++ TY
Sbjct: 676 KAAL-YFCEDMEKNGLCADLIAT-NVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATY 733
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ GY + + + + L M + GI P+ + +++I G ++ + ++++ L+
Sbjct: 734 NILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLL 793
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
T+ L+ YC+ ++ A ++ +M P TT++ S+ V++
Sbjct: 794 DGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQE 853
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
+ L +M+E G PDR Y L+ +C+ + A ++ EM+ G + L+
Sbjct: 854 SHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVR 913
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMS 381
L + K +EA + M+R+ L+P TF L F + A KL C+V
Sbjct: 914 GLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKL 973
Query: 382 SVPRSMELLDSRCKD 396
V L+ C D
Sbjct: 974 DVIAYNVLISGLCAD 988
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 21/361 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSL 82
VPD V TF +LI + R G ++ + K + +G + ++ L+ +
Sbjct: 410 VPDVV---TFSVLINGFCRVGKIKNVKEI--------ICKMYKAGLAPNSIIYTTLIYNY 458
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G V A + + + + + N+L++ + V AE F+ M K P
Sbjct: 459 CKTGDVVEAFKVYVAMSRI--GYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N +T+ ++ GY +A + EM K G P+ Y ++ L AG+F+E ++
Sbjct: 517 NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++ VTY +++ K+G L A + M+ R LP TY F +
Sbjct: 577 DKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRR 636
Query: 263 GKVEDAMNLYRKMIESG-YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
GK+ A++ Y ++ G +P+++ Y + L + + A+ ++M+ G DL
Sbjct: 637 GKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIA 696
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHYLTFKRLNDEFKKRGMTALAQKLCNV 379
+ ++++ RM K +A F M+ G+ P T+ L + K+ + L N+
Sbjct: 697 TNVILNGYSRMGKMAKAGDIFT-MMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNI 755
Query: 380 M 380
M
Sbjct: 756 M 756
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 154/377 (40%), Gaps = 49/377 (12%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSL 82
G P+ V TFV RAG +AA++ E DM KN + ++L+
Sbjct: 653 GAVSPEKVMYTTFV---DGLFRAGQSKAALYFCE-----DMEKNGLCADLIATNVILNGY 704
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
+ G++ A + F + +P++ YNILL+G+ + KN+ + M + + P
Sbjct: 705 SRMGKMAKAGDIFTMMWS-GITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFP 763
Query: 143 NVVTYGTLVEGYCRLRRVD-----------------------------------RAIRLV 167
+ +T +L+ G+C+ +D +A LV
Sbjct: 764 DKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLV 823
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
M I P+ ++++I L +E ++ L P Y +LV C+
Sbjct: 824 NIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRM 883
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G + GA K+ M + G + R +K GKVE+A + M+ P T+
Sbjct: 884 GHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATF 943
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD--TSTMLIHLLCRMYKFDEASAEFEDM 345
L+ + C+ + L A+++ M CD+ LD +LI LC A ++++
Sbjct: 944 TTLMHMFCRNESLVEALKLKDTMDF--CDVKLDVIAYNVLISGLCADGDVASALKLYKEI 1001
Query: 346 IRRGLVPHYLTFKRLND 362
+RGL P+ T+ L D
Sbjct: 1002 KQRGLWPNMTTYCILID 1018
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 130/305 (42%), Gaps = 35/305 (11%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V+++L+ + R V DA + M P+V T L+ + R+V KEM
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEM 159
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ P+ +N +I+ L G+ ++ ++++ P++VTY +++ YCK G
Sbjct: 160 LARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRY 219
Query: 231 EGASKILKMMISRG-----------------------------------FLPSPTTYNYF 255
+ A +++ M S+G P+ TYN
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K GK+ A ++++M P+ +TY+ L+ C + + A+ + + M+ G
Sbjct: 280 INGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ + + L++ LCR KF+ + + E M G++ + + + D + G+ + K
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399
Query: 376 LCNVM 380
L + M
Sbjct: 400 LLDKM 404
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N + L+ Y R V A+ + M G P+ N ++ LV+ + V
Sbjct: 97 NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L P + T+ L+ C G L+ A +LK M G++PS TYN ++ K
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+ + A+ L +M G D TY++L+ LCK ++ + K+M+ R + T
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I+ + K A+ F++M L+P+ +T+ L D G A + +M +
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336
Query: 383 V-PRSME-----LLDSRCK 395
P+ E LL+ C+
Sbjct: 337 TGPKPNEVSYSALLNGLCR 355
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 2/224 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+ C+ V A + + D P + ++ +++ R V+++ E
Sbjct: 803 FNMLIMKYCETDEVGKAFDLVNIMNLFD--IFPDMTTHDSIISVLSRVSTVQESHLLLHE 860
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ Y LV CR+ + A +L EM GI + + ++ GL + G+
Sbjct: 861 MLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGK 920
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE +++ L PT+ T+T+L+ +C+ L A K+ M YN
Sbjct: 921 VEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNV 980
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
G V A+ LY+++ + G P+ TY IL+ + D
Sbjct: 981 LISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTND 1024
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I VL++ + LL + + +PD + ++ L+ R R G + A F+ +
Sbjct: 841 IISVLSRVSTVQESHLLLHEMLERGCIPD---RRQYIALVNRMCRMGHIHGA---FKLKD 894
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + SG L+ L K G+V+ A L +S PT+ + L++ +
Sbjct: 895 EMEAL-GISSGDVAESALVRGLAKCGKVEEAKLVLDFM--LRKSLIPTIATFTTLMHMFC 951
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R++++ +A + M +V +V+ Y L+ G C V A++L KE+++ G+ PN
Sbjct: 952 RNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMT 1011
Query: 181 VYNTVIDGL 189
Y +ID +
Sbjct: 1012 TYCILIDAI 1020
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+P+ ++ R + + G V DA+ +R M G+ P T ++LL L KE K+
Sbjct: 97 NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
KEM R D+ T +LI++LC K +A + M G VP +T+ + + + K+
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216
Query: 368 GMTALAQKLCNVMSSVPRSME--------LLDSRCKD 396
G A +L + M S + +E L+D CK+
Sbjct: 217 GRYKAALELIDQMGS--KGIEADACTYNMLVDDLCKN 251
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 11/353 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ + G V+ T +I+IR+Y V AI TF
Sbjct: 167 MISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAINTFYAHK 226
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
FD G F+ LL +LC+ V+ A K++ + + +NI+LNGW
Sbjct: 227 RF----KFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIVLNGWC 279
Query: 121 RS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++A+R W EM K + +VV+Y +++ Y + + + +L +M++ GIEP+
Sbjct: 280 NVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDR 339
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+YN+VI L + E +M+ P VTY SL+K C+A ++ A +
Sbjct: 340 KIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDE 399
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G P+ TY+ FFR E+ L M + G P TY +L++ C+ +
Sbjct: 400 MLQHGHSPTIRTYHAFFR---SLRTGEEVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQ 456
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D ++ ++ G D + +LIH L K +EA + DM + L+P
Sbjct: 457 FDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLLP 509
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRRVD 161
++ +VR Y+ +++ + + A EMR ++VT TL + YC + V
Sbjct: 157 YSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVG 216
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE----PGPTMVTY 217
RAI ++ + + +++ L R++ V E + C P T ++
Sbjct: 217 RAINTFYAHKRFKFDLGIDEFQSLLSALC---RYKNVQDA-EHLMFCNKDVFPFNTK-SF 271
Query: 218 TSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
++ G+C G A +I + M R +Y +SK G + LY +M
Sbjct: 272 NIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMK 331
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
E G PDR Y+ ++ L K + AI + K M+ +G + T LI LCR K D
Sbjct: 332 EVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKID 391
Query: 337 EASAEFEDMIRRGLVPHYLTF 357
EA F++M++ G P T+
Sbjct: 392 EARGLFDEMLQHGHSPTIRTY 412
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 164/352 (46%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++VLAK+ D + D +G VP+ T+ L+R +A E A F
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTY---TYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N S + IL+ LC+ +V A+E ++ +D P V Y LL+G
Sbjct: 80 AQGCSPNVFS----YSILIAGLCRGQKVDEAAELLNEM--IDGGHQPNVVTYGSLLSGLC 133
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +K+A + M P+ V Y L++G+ + + A RL +EM ++G P
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN+++ G G F V + + L P + T+ +L+ G+CK GD+ A ++ M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G P +YN R GK +A L R+MI SG PD ++Y+IL+ K L
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D AI++ E+ G + D + + +I LCR K A F+DMI G P
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 5/320 (1%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+++ G + LL+ L K GR Y L P Y LL +++ +
Sbjct: 12 HYNHGTLSYNYLLEVLAKSGRCDHV--YGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A + M + +PNV +Y L+ G CR ++VD A L+ EM G +PN + Y +++
Sbjct: 70 EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
GL + G+ +E + R + P V Y L+ G+ K GD+ A ++ + M+ +G +
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ TYN FS+ G+ +L++ M+ G P+ T++ LL CK + A ++
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM+ GC D+ + L+ +C K EA +MIR G+ P +++ L D + K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309
Query: 367 RGMTALAQKLCNVMSSVPRS 386
G A KL +P+S
Sbjct: 310 SGALDHAIKL---FYEIPKS 326
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 168/352 (47%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + ++ D A LL + I G P+ V T+ L+ + G ++ A+ F
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVV---TYGSLLSGLCKMGKLKEAVDLFSRM- 148
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + ++ +L+D K+G + A F + L++ PTV YN LL+G+
Sbjct: 149 ---VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM--LEKGCIPTVFTYNSLLSGFS 203
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + + +M ++ PN+ T+ L++G+C++ + A RL EMR G P+ +
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT++ G+ G+ E ++ + GP +V+Y L+ GY K+G L+ A K+ +
Sbjct: 264 SYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P +Y+ + GKV A +++ MI +G PD L+ LC+ ++L
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ ++ + M C + +L++ LC+ + D+ F ++ RG P
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LLD CK G + A F + + L P V YN L+ G +A+R E
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSL--GCPPDVVSYNTLMRGMCSKGKPHEAQRLLRE 287
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P++V+Y L++GY + +D AI+L E+ K G+EP+A Y+T+ID L AG+
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + P LV G C+ L + ++ + M+ +P YN
Sbjct: 348 VGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNL 407
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
K + +D ++ ++ E G++PD ++L+ L + D + A
Sbjct: 408 LMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 8/337 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVK 89
VS T+ LI Y + G++ A+ +E +MV + + ++ CK+G++
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWE-----EMVTRGVSPTVASHNTIMYGFCKEGKMS 359
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + L ++ P + YN L+ G+ R N+ +A E+R N++ N+VTY T
Sbjct: 360 DARQQLSDM--LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++G CRL ++ A++L ++M GI P+ + Y +++G + G + L
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P YT+ + G K GD A K+ + M+++GF P TYN F K G +E+A
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +KMI G+ PD +TY + + L ++ +M RG + T T+LIH
Sbjct: 538 ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAH 597
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ D A A F +M +G+VP+ +T+ L + F K
Sbjct: 598 ALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 175/356 (49%), Gaps = 13/356 (3%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
L D + + +PD +S +T LI + R G + A F + L +N +
Sbjct: 365 LSDMLKKNLMPDIISYNT---LIYGFCRLGNIGEA---FILLDELRF-RNLSFNIVTYNT 417
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+D LC+ G ++ A + K +++ P V Y +L+NG + N+ A+ F+ EM
Sbjct: 418 LIDGLCRLGDLETALKL--KEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ P+ Y + G +L +A +L +EM +G P+ I YN ++GL + G EE
Sbjct: 476 VGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEE 535
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++++ + P VTYTS + + + G L +I M+SRG P+ TY
Sbjct: 536 AGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIH 595
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ G+++ AM + +M E G P+ +TY++L+ CK K+D A + EM+ +G
Sbjct: 596 AHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFP 655
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP----HYLTFKRLNDEFKKRGM 369
+ T T+LI+ C M K+ EA + M+ + + P H K+L+ ++K + +
Sbjct: 656 NKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAV 711
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 143/287 (49%), Gaps = 4/287 (1%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKN--VKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
K + + P V+ N +L R KN VK E + + M + + P V TY T++ +C+
Sbjct: 192 KMMRNRFLPDVKNCNRILK-ILRDKNLLVKALEVYRM-MGEYGIRPTVTTYNTMLHSFCK 249
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
V RA+ LV +M++ G P+ + +N +I+GL + G ++ G+++ + T
Sbjct: 250 GGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYT 309
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y L+ GYCK G L A + + M++RG P+ ++N F K GK+ DA M+
Sbjct: 310 YNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDML 369
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+ PD ++Y+ L+ C+ + A + E++ R ++ T LI LCR+ +
Sbjct: 370 KKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
A EDMI RG+ P +T+ L + K G +A++ + M V
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHV 476
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV YN +L+ + + V+ A +M++ P+ VT+ L+ G + + +A L
Sbjct: 235 PTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGL 294
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++EM K G+ + YN +I G + G E + E + PT+ ++ +++ G+CK
Sbjct: 295 IQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCK 354
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A + L M+ + +P +YN F + G + +A L ++ + + +T
Sbjct: 355 EGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVT 414
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LC+ L+ A+++ ++M RG D+ T T+L++ C++ A F++M+
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEML 474
Query: 347 RRGLVPHYLTFK-RLNDEFKKRGMTALAQKL 376
GL P + R+ E K G TA A KL
Sbjct: 475 HVGLAPDQFAYTARIVGEL-KLGDTAKAFKL 504
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 137/325 (42%), Gaps = 45/325 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI R G +E A+ E DM+ + + +L++ CK G + A E
Sbjct: 414 TYNTLIDGLCRLGDLETALKLKE-----DMINRGIHPDVVTYTVLVNGACKLGNMLMAKE 468
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+F + L AP Y + G + + A + EM + P+V+TY V G
Sbjct: 469 FFDEM--LHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNG 526
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE---------------- 197
C+L ++ A L+++M ++G P+ + Y + + +E G E
Sbjct: 527 LCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPT 586
Query: 198 ----------------VSGMMERFL-VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
+ M FL + E G P ++TY L+ G+CK ++ A K
Sbjct: 587 VVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFI 646
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M +G P+ TY GK ++A+ LY +M+ PD T+ LLK L K+
Sbjct: 647 EMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDY 706
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTST 323
K+ A+Q + + G D +D +T
Sbjct: 707 KVQ-AVQFIESLILDG-DRTIDANT 729
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ KM+ + + PD + +LKIL ++ L A++V + M G + T ++H C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ + A M RG P +TF L + K+G A+ L M+
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMA 299
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 155/322 (48%), Gaps = 9/322 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
++ Y AG ++AA L + A + L+ LC +GR A +
Sbjct: 6 MVAGYCGAGQLDAA-------RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
L + P V Y ILL + K A + EMR + TP++VTY +V G C+
Sbjct: 59 --LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
RVD AI +K + G EPN + YN V+ GL A R+E+ +M P +VT+
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L+ C+ G +E A ++L+ + G P+ +YN F K K++ AM M+
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD ++Y+ LL LC+ ++D+A+++ ++K +GC L + +I L + K EA
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 339 SAEFEDMIRRGLVPHYLTFKRL 360
+M+ +GL P +T+ +
Sbjct: 297 LELLNEMVSKGLQPDIITYSTI 318
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 175/366 (47%), Gaps = 11/366 (3%)
Query: 27 VPDFVSKDTFVILIRRYA-RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
VPD V T+ IL+ R+G +A E + K + ++++ +C++
Sbjct: 64 VPDVV---TYTILLEATCKRSGYKQAMKLLDEMRD-----KGCTPDIVTYNVVVNGICQE 115
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GRV A E+ P YNI+L G ++ +DAE EM ++ PNVV
Sbjct: 116 GRVDDAIEFLKNLPS--YGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 173
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ L+ CR V+ A+ +++++ K G PN++ YN ++ + + ++ ++
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +V+Y +L+ C++G+++ A ++L + +G P +YN +K GK
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++A+ L +M+ G PD +TY + LC+ED+++ AI+ +++ G + +
Sbjct: 294 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 353
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
I LC+ + A F MI G +P+ T+ L + G+ A+ L + + S
Sbjct: 354 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAG 413
Query: 386 SMELLD 391
LLD
Sbjct: 414 EEILLD 419
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+ Y +V GYC ++D A RLV EM +EP+A YNT+I GL GR +++
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L P +VTYT L++ CK + A K+L M +G P TYN + G+
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V+DA+ + + G P+ ++Y+I+LK LC ++ + A ++ EM +GC ++ T M
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
LI LCR + A E + + G P+ L++ L F K+
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 220
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 131/265 (49%), Gaps = 3/265 (1%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YN ++ G+ + + A R EM E P+ TY TL+ G C R A+ ++ EM
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ P+ + Y +++ + +++ +++ P +VTY +V G C+ G ++
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A + LK + S G P+ +YN + + EDA L +M + G P+ +T+++L+
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC++ ++ A++V +++ GC + + L+H C+ K D+A A + M+ RG
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKL 376
P +++ L + G +A +L
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVEL 264
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 9/290 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L A+ ++ A L+ ++G P V TF +LI R G+VE A+ E
Sbjct: 143 VLKGLCTAERWEDAE-ELMGEMGQKGCPPNVV--TFNMLISFLCRKGLVEPALEVLEQIP 199
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N S + LL + CKQ ++ A + + + P + YN LL
Sbjct: 200 KYGCTPNSLS----YNPLLHAFCKQKKMDKAMAFLDLM--VSRGCYPDIVSYNTLLTALC 253
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS V A +++ + P +++Y T+++G + + A+ L+ EM +G++P+ I
Sbjct: 254 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 313
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+T+ GL R E+ + P V Y +++ G CK + A + M
Sbjct: 314 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 373
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
I G +P+ +TY + G +++A +L ++ L H++
Sbjct: 374 IGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLI 423
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 8/318 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI RAG ++ A + + + D + +L+D CK+G++ +E
Sbjct: 401 TYTTLINGLCRAGELKEAEKVLQEM----LARRLDVDEVTYTVLVDGYCKRGKM---AEA 453
Query: 95 FHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + Q AP V Y L +G + +V+ A EM + + N TY +L+ G
Sbjct: 454 FQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 513
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +D+A+R + +M G++P+ Y T+ID L ++G + +++ L PT
Sbjct: 514 LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY L+ G+C +G +EG K+L+ M+ + P+ TTYN + + ++ +Y+
Sbjct: 574 IVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYK 633
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M P+ TY+IL+K CK + A EM +G + + + LI LL +
Sbjct: 634 GMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKK 693
Query: 334 KFDEASAEFEDMIRRGLV 351
KF EA F DM + G
Sbjct: 694 KFVEARKLFHDMRKEGFT 711
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 180/369 (48%), Gaps = 22/369 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++KVL A + A L D++ PD V T+ ILI Y G +E A+ +
Sbjct: 268 LLKVLCGAGRVEDAR-QLFDEMAS--PPDVV---TYGILIHGYCALGELENAVKLLD--- 318
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNIL 115
DMV + + A+++ ++ LC +GRV A + H + LD++ VY +
Sbjct: 319 --DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEA------VYTTV 370
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L+G+ ++ A R++ EM+++ + + VTY TL+ G CR + A ++++EM +
Sbjct: 371 LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL 430
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+ + + Y ++DG + G+ E + + P +VTYT+L G CK GD++ A++
Sbjct: 431 DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANE 490
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L M ++G + TYN K G ++ AM M +G PD TY L+ LC
Sbjct: 491 LLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K +LD A + +EM G + T +L++ C + + E M+ + + P+
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610
Query: 356 TFKRLNDEF 364
T+ L ++
Sbjct: 611 TYNSLMKQY 619
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 140/289 (48%), Gaps = 10/289 (3%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
K + + L++ LC+ G +K A E +R ++D+ Y +L++G+ +
Sbjct: 393 KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV------TYTVLVDGYCK 446
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ +A + M + V PNVVTY L +G C+ V A L+ EM +G+E NA
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN++I+GL +AG ++ M P + TYT+L+ CK+G+L+ A +L+ M+
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G P+ TYN F G+VE L M+E P+ TY+ L+K C + +
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
++ K M R + + +T +LI C+ EA +MI +G
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 8/297 (2%)
Query: 31 VSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
V + T+ +L+ Y + G M EA F+ N + + + + L D LCKQG V+
Sbjct: 432 VDEVTYTVLVDGYCKRGKMAEA----FQVHNTM-VQRGVAPNVVTYTALSDGLCKQGDVQ 486
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
AA+E H+ ++ YN L+NG ++ + A R +M + P+V TY T
Sbjct: 487 AANELLHEMS--NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTT 544
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++ C+ +DRA L++EM GI+P + YN +++G +GR E ++E L
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P TY SL+K YC +++ ++I K M SR P+ TYN + K +++A
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ +MIE G+ +Y L+++L K+ K A ++ +M+ G + D I
Sbjct: 665 YFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 153/319 (47%), Gaps = 19/319 (5%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
D + ILL LC GRV+ A + F + + P V Y IL++G+ +++A
Sbjct: 259 DKNVCSYNILLKVLCGAGRVEDARQLFD-----EMASPPDVVTYGILIHGYCALGELENA 313
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ +M V PN Y ++V C RV A+ +V++M + + VY TV+ G
Sbjct: 314 VKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSG 373
Query: 189 ------LVEAGR-FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
LV A R F+E M+R + G VTYT+L+ G C+AG+L+ A K+L+ M+
Sbjct: 374 FCNKGDLVSARRWFDE----MQRKGLATDG---VTYTTLINGLCRAGELKEAEKVLQEML 426
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+R TY + K GK+ +A ++ M++ G P+ +TY L LCK+ +
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ EM +G +++ T LI+ LC+ D+A DM GL P T+ L
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Query: 362 DEFKKRGMTALAQKLCNVM 380
D K G A L M
Sbjct: 547 DALCKSGELDRAHDLLQEM 565
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR--LTYHIL 290
++ +L+ + G PSP N +++A+ L++ + PD+ +Y+IL
Sbjct: 219 SAPLLRRVRQYGISPSPEACNAVLSRLP----LDEAIELFQGL------PDKNVCSYNIL 268
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
LK+LC +++ A Q+ EM D+ T +LIH C + + + A +DM+ RG+
Sbjct: 269 LKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGV 325
Query: 351 VPHYLTF 357
P+ +
Sbjct: 326 EPNATVY 332
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 6/297 (2%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+ TV +NI++N + +K A F M PNVV+Y T++ GY ++ A R
Sbjct: 246 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 305
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ MR +GIEP++ Y ++I G+ + GR EE SG+ ++ + P VTY +L+ GYC
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 365
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
GDLE A M+ +G +PS +TYN G++ +A ++ ++M + G PD +
Sbjct: 366 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+IL+ + A + EM +G + T T LI++L R + EA FE +
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPRS----MELLDSRCKD 396
+ +G+ P + F + D G A L M SVP L+ RC++
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 37/329 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I+++ LCK+G++K A E+ + L + P V YN +++G+ N++ A R
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIGFMEGL--GFKPNVVSYNTIIHGYSSRGNIEGARRILDA 309
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG------ 188
MR + + P+ TYG+L+ G C+ R++ A L +M + G+ PNA+ YNT+IDG
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 369
Query: 189 -------------------------LVEA----GRFEEVSGMMERFLVCEPGPTMVTYTS 219
LV A GR E M++ P +TY
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 429
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GY + G+ + A + M+S+G P+ TY S+ ++++A +L+ K+++ G
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+PD + ++ ++ C ++ A + KEM + D T L+ CR K +EA
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++M RRG+ P ++++ L + +RG
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISGYGRRG 578
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 158/326 (48%), Gaps = 6/326 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G +E A F+ + +V N A + L+D C +G ++ A Y
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN----AVTYNTLIDGYCNKGDLERAFSY 376
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + + P+V YN+L++ F + +A+ EMRK+ + P+ +TY L+ GY
Sbjct: 377 --RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 434
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R +A L EM +GIEP + Y ++I L R +E + E+ L P +
Sbjct: 435 SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 494
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+ + ++V G+C G++E A +LK M + P T+N + + GKVE+A L +
Sbjct: 495 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD ++Y+ L+ + + A +V EM G + L T LI LC+ +
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++M+ +G+ P T+ L
Sbjct: 615 GDLAEELLKEMVNKGISPDDSTYLSL 640
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 11/301 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
VP+ V+ +T LI Y G +E A F+ +MVK S + +L+ +L +
Sbjct: 351 VPNAVTYNT---LIDGYCNKGDLERA-----FSYRDEMVKKGIMPSVSTYNLLVHALFME 402
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+ A + + ++ + P YNIL+NG+ R N K A EM + + P V
Sbjct: 403 GRMGEADDMIKEMRK--KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 460
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY +L+ R R+ A L +++ +G+ P+ I++N ++DG G E +++
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P VT+ +L++G C+ G +E A +L M RG P +YN + + G +
Sbjct: 521 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 580
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA + +M+ G+ P LTY+ L+K LCK + DLA ++ KEM +G D T L
Sbjct: 581 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640
Query: 326 I 326
I
Sbjct: 641 I 641
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 35/224 (15%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+ + LV C LRR D A + M+++GI P N ++ ++ R E +
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
T+ T+ +V CK G L+ A + + M GF P+ +YN +S G
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+E A + M G PD TY
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTY-----------------------------------GS 324
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI +C+ + +EAS F+ M+ GLVP+ +T+ L D + +G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 368
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ C++G+V+ A + K + P YN L++G+ R ++KDA R E
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKR--RGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 589
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
M P ++TY L++ C+ + D A L+KEM +GI P+ Y ++I+G+
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 186/394 (47%), Gaps = 25/394 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L A +++ A+ ++ + IG +PD T+ ++ A +E A FE
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQGFIPD---TSTYSKVLNYLCNASKMELAFLLFEEMKRG 471
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+V + + + I++DS CK G ++ A ++F++ +E+ P V Y L++ + ++
Sbjct: 472 GLVADVYT----YTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKA 525
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M E PN+VTY L++G+C+ +V++A ++ + M
Sbjct: 526 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 585
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
PN + Y ++DG ++ R EE +++ + P + Y +L+ G CK
Sbjct: 586 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 645
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A ++ M GF + TY+ + K + + A + KM+E+ P+ +
Sbjct: 646 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 705
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LCK K D A ++ + M+ +GC ++ T T +I + K + E M
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G+ P+Y+T++ L D K G +A L M
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 184/411 (44%), Gaps = 60/411 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF-- 58
+I KAK+ A L + +P+ V T+ LI + +AG VE A FE
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIV---TYSALIDGHCKAGQVEKACQIFERMC 574
Query: 59 ----ANNLDM-VKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELD----QS 104
++DM K +D + + LLD CK RV+ A RK LD +
Sbjct: 575 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA------RKLLDAMSMEG 628
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P VY+ L++G + + +A+ EM + + TY +L++ Y +++R D A
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+++ +M + PN ++Y +IDGL + G+ +E +M+ P +VTYT+++ G+
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------- 271
G +E ++L+ M S+G P+ TY + K G ++ A NL
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 808
Query: 272 --YRKMIES------------------GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YRK+IE P Y +L+ L K +L++A+++ +E+
Sbjct: 809 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 868
Query: 312 CRGCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +ST LI LC K + A F +M ++G++P +F L
Sbjct: 869 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 919
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 182/434 (41%), Gaps = 58/434 (13%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDF---VSKDTFVILIRRYARAGMVEAAIWTFEF 58
+ VL + + ++ + L+++G + DF S+ T+ LI+ + +A +++A
Sbjct: 162 LNVLVRKHCRNGSFSIALEELG--RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 219
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + N SLCK G+ + A +++ P Y L++G
Sbjct: 220 MS----LANLRMDGFTLRCFAYSLCKVGKWREALTLVET-----ENFVPDTVFYTKLISG 270
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++A F MR + PNVVTY TL+ G +++ R R++ M EG P+
Sbjct: 271 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 330
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV----------------- 221
++N+++ +G ++++ + C P V Y L+
Sbjct: 331 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDL 390
Query: 222 --KGY----------------------CKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
K Y C AG E A +++ MI +GF+P +TY+
Sbjct: 391 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 450
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
Y K+E A L+ +M G D TY I++ CK ++ A + EM+ GC
Sbjct: 451 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 510
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T T LIH + K A+ FE M+ G +P+ +T+ L D K G +K C
Sbjct: 511 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV---EKAC 567
Query: 378 NVMSSVPRSMELLD 391
+ + S ++ D
Sbjct: 568 QIFERMCGSKDVPD 581
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 37/300 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D LCK G++ A E K + + + T+ Y+ L++ +F+ K A +
Sbjct: 635 VYDALIDGLCKVGKLDEAQEV--KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 692
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + PNVV Y +++G C++ + D A +L++ M ++G +PN + Y +IDG G
Sbjct: 693 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 752
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E ++ER P VTY L+ CK G L+ A +L+ M + Y
Sbjct: 753 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 812
Query: 254 YFFRYFSK-----------FGKVEDA--MNLYRKMIESGYTPDRL--------------- 285
F+K G+ + A +++YR +I++ RL
Sbjct: 813 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 872
Query: 286 -------TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
TY+ L++ LC +K++ A Q+ EM +G ++ + LI L R K EA
Sbjct: 873 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D LCK G+ A + +E + P V Y +++G+ ++
Sbjct: 705 IYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQPNVVTYTAMIDGFGMIGKIETCLELLE 762
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR-------------------KEG 174
M + V PN VTY L++ C+ +D A L++EM+ KE
Sbjct: 763 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 822
Query: 175 IE--------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV----T 216
IE P VY +ID L++A R E ++E V T+V T
Sbjct: 823 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSST 880
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
Y SL++ C A +E A ++ M +G +P ++ + + K+ +A+ L
Sbjct: 881 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 935
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 3/256 (1%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ T VYN L++ R + K E F ++R ++ LV +CR A+
Sbjct: 120 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIAL 179
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ ++ P+ YN +I ++A R + S + + T
Sbjct: 180 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 239
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G A L ++ + F+P Y + E+AM+ +M + P+
Sbjct: 240 CKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 296
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY LL + +L +V M GC L+H C A +
Sbjct: 297 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 356
Query: 345 MIRRGLVPHYLTFKRL 360
M++ G +P Y+ + L
Sbjct: 357 MVKCGHMPGYVVYNIL 372
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 164/322 (50%), Gaps = 9/322 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ ++ +T LI+ G ++ A++ F + L + + F + L++ LCK G
Sbjct: 125 PNAITLNT---LIKGLCFRGEIKKALY---FHDQL-VAQGFQLDQVSYGTLINGLCKTGE 177
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
KA + RK S P V +YN ++N ++K + DA + EM + ++P+VVTY
Sbjct: 178 TKAVARLL--RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY 235
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C + + A L+ EM+ + I PN +N +ID L + G+ +E ++ +
Sbjct: 236 TTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMK 295
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + TY SL+ GY +++ A + M RG P Y K V++
Sbjct: 296 ACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDE 355
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AM+L+ +M PD +TY+ L+ LCK L+ AI + K MK +G D+ + T+L+
Sbjct: 356 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLD 415
Query: 328 LLCRMYKFDEASAEFEDMIRRG 349
LC+ + ++A F+ ++ +G
Sbjct: 416 GLCKSGRLEDAKEIFQRLLAKG 437
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 151/287 (52%), Gaps = 9/287 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI + G ++ A F N + + KN + F IL+D+L K+G+
Sbjct: 230 PDVV---TYTTLIHGFCIMGHLKEA---FSLLNEMKL-KNINPNVCTFNILIDALSKEGK 282
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+K A + P V YN L++G+F VK A+ + M + VTP+V Y
Sbjct: 283 MKEAKILL--AVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ G C+ + VD A+ L +EM+ + + P+ + YN++IDGL + E + +R
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + +YT L+ G CK+G LE A +I + ++++G+ + Y K G ++
Sbjct: 401 QGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDE 460
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
A++L KM + G PD +T+ I+++ L ++D+ D A ++ +EM RG
Sbjct: 461 ALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 163/365 (44%), Gaps = 26/365 (7%)
Query: 55 TFEFANNLDMV---KNFDSGASLFE---------------ILLDSLCKQGRVKAASEYFH 96
TF F N L + K++ + SLF+ IL++ C Q + A F
Sbjct: 57 TFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVF- 115
Query: 97 KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
L + + P N L+ G +K A F ++ + + V+YGTL+ G C+
Sbjct: 116 -ANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
RL++++ ++P+ ++YNT+I+ L + + + +V P +VT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
YT+L+ G+C G L+ A +L M + P+ T+N SK GK+++A L M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
++ PD TY+ L+ D++ A V M RG D+ T +I+ LC+ D
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELL 390
EA + FE+M + ++P +T+ L D K A LC + V LL
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414
Query: 391 DSRCK 395
D CK
Sbjct: 415 DGLCK 419
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 11/352 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K E A LL K+ GH V PD V +T +I + ++ A +
Sbjct: 168 LINGLCKTGE-TKAVARLLRKLEGHSVKPDVVMYNT---IINSLCKNKLLGDACDVYSEM 223
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+VK + L+ C G +K A ++ K ++ P V +NIL++
Sbjct: 224 ----IVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKL--KNINPNVCTFNILIDAL 277
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +K+A+ M K + P+V TY +L++GY + V A + M + G+ P+
Sbjct: 278 SKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDV 337
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +I+GL + +E + E P +VTY SL+ G CK LE A + K
Sbjct: 338 QCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKR 397
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G P +Y K G++EDA ++++++ GY + Y +L+ LCK
Sbjct: 398 MKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGF 457
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D A+ + +M+ +GC D T ++I L + D+A +MI RGL+
Sbjct: 458 FDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 8/343 (2%)
Query: 28 PDFVSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
P+ ++ D T ILI + + A F AN L + F A L+ LC +
Sbjct: 85 PNGITPDLCTLSILINCFCHQAHITLAFSVF--ANILK--RGFHPNAITLNTLIKGLCFR 140
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G +K A YFH + + Q + Y L+NG ++ K R ++ +V P+VV
Sbjct: 141 GEIKKAL-YFHDQL-VAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 198
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y T++ C+ + + A + EM +GI P+ + Y T+I G G +E ++
Sbjct: 199 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P + T+ L+ K G ++ A +L +M+ P TYN + +V
Sbjct: 259 KLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEV 318
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ A ++ M + G TPD Y ++ LCK +D A+ + +EMK + D+ T L
Sbjct: 319 KHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSL 378
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
I LC+ + + A A + M +G+ P ++ L D K G
Sbjct: 379 IDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSG 421
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/126 (18%), Positives = 52/126 (41%)
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L+ P P + +++ + K G P T + F +
Sbjct: 49 LLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHI 108
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A +++ +++ G+ P+ +T + L+K LC ++ A+ ++ +G +D + L
Sbjct: 109 TLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTL 168
Query: 326 IHLLCR 331
I+ LC+
Sbjct: 169 INGLCK 174
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 173/346 (50%), Gaps = 8/346 (2%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGR 87
F+ K+ F+++ R Y +A + E AI F MV F ++ F +L+ + ++G
Sbjct: 113 FIEKN-FILVFRAYGKAHLPEKAIELFG-----RMVDEFQCRRTVRSFNSVLNVIIQEGL 166
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A E++ + +P V +N+++ + V A + EM + P+V TY
Sbjct: 167 FHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTY 226
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++G C+ R+D A+ L+ EM+ EG P+++ +N +I+GL + G V+ +++ +
Sbjct: 227 CTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 286
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +++ G C G L+ A +L M++ +P+ TY K G+ D
Sbjct: 287 KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVD 346
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
++L + E G+ + Y L+ L KE+K + A+ + K+M +GC ++ + LI
Sbjct: 347 GVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALID 406
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
LCR K DEA +M+ +G P+ T+ L F K G + A
Sbjct: 407 GLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 149/315 (47%), Gaps = 25/315 (7%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ L KQGR +E + Y+ L++G F+ + ++A W +
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEE--RGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 388
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ PN+V Y L++G CR ++D A ++ EM +G PNA Y+++I G + G
Sbjct: 389 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 448
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P + Y+ L+ G C+ G L A + M+ RG P Y+
Sbjct: 449 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 508
Query: 255 FFRYFSKFGKVEDAMNLYRKMI--ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
G VE + L+ +M+ ES PD +TY+ILL+ LCK++ + AI + M
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568
Query: 313 RGCDIDLDTSTMLIH------------------LLCRMYKFDE---ASAEFEDMIRRGLV 351
RGC+ DL T + ++ L+ R++K A+ E M+++ L
Sbjct: 569 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 628
Query: 352 PHYLTFKRLNDEFKK 366
P+ T++R+ E K
Sbjct: 629 PNASTWERIIPELCK 643
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 4/308 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L++ LCK+G + ++ + P YN ++NG + A
Sbjct: 261 FNVLINGLCKKGDMVRVTKLVDNM--FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 318
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PN VTYGTL+ G + R + L+ + + G N Y+T+I GL + +
Sbjct: 319 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 378
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE G+ ++ + P +V Y++L+ G C+ G L+ A +IL M+++G P+ TY+
Sbjct: 379 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 438
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K G + A+ ++++M ++ P+ + Y +L+ LC++ KL A+ + M RG
Sbjct: 439 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 498
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI--RRGLVPHYLTFKRLNDEFKKRGMTAL 372
D+ + +IH LC + F +M+ P +T+ L K+ +
Sbjct: 499 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 558
Query: 373 AQKLCNVM 380
A L N M
Sbjct: 559 AIDLLNSM 566
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 60/251 (23%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ L+D LC++G++ A E + +++ P Y+ L+ G+F++ N + A R W
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEM--VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK 457
Query: 134 EMRKENVTPN-----------------------------------VVTYGTLVEGYCRLR 158
EM K N PN VV Y +++ G C
Sbjct: 458 EMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 517
Query: 159 RVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
V+ ++L EM ++ +P+ + YN ++ L + ++ L P ++T
Sbjct: 518 SVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 577
Query: 217 YT---------------------SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
LV K + GA+KI+++M+ + P+ +T+
Sbjct: 578 CNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERI 637
Query: 256 FRYFSKFGKVE 266
K KV+
Sbjct: 638 IPELCKPKKVQ 648
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 18/349 (5%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
G+E PD ++ +TF I+ + G + A+ F + L + F + L++ LC
Sbjct: 135 GYE-PDTITLNTF---IKGFCLKGQIHQAL---NFHDKL-VALGFHLDQVSYGTLINGLC 186
Query: 84 KQGRVKAASEYFH----KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
K G +AA E K +LD V +Y+ +++ + KNV DA + EM
Sbjct: 187 KVGETRAALELLRRVDGKLVQLD------VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR 240
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
++ N+VTY L+ G+C + ++ AI L +M E I P+ +N ++D + GR +E
Sbjct: 241 ISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAK 300
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ + P +VTY SL+ GYC ++ A IL M RG + +YN F
Sbjct: 301 NGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K V+ AM L+++M P+ +TY+ L+ LCK ++ A+++ M RG D+
Sbjct: 361 CKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDI 420
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T + ++ LC+ + D+A A + +G+ P+ T+ L D K G
Sbjct: 421 ITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G ++ AI F N +N + F IL+D+ CK+GRVK A
Sbjct: 247 TYSALISGFCIVGKLKDAIGLF----NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNG 302
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ Q P + YN L++G+ V A+ M VT V +Y ++ G+
Sbjct: 303 L--AMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+++ VD+A++L KEM + I PN I YN++IDGL ++GR +++ P +
Sbjct: 361 CKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDI 420
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY+S++ CK ++ A +L + +G P+ TY K G++EDA N++
Sbjct: 421 ITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFED 480
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ GY TY ++++ C D A+ + +MK C D T ++I C ++
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII---CSLFD 537
Query: 335 FDE---ASAEFEDMIRRGLVPHYLTF 357
DE A +MI RGL+ +L +
Sbjct: 538 KDENDKAEKLLREMITRGLLYSFLEY 563
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S + L+ C G++K A F+K ++ P V +NIL++ + + VK+A+
Sbjct: 243 SNIVTYSALISGFCIVGKLKDAIGLFNKMTS--ENINPDVYTFNILVDAFCKEGRVKEAK 300
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
M K+ + P++VTY +L++GYC + V+ A ++ M G+ YN VI+G
Sbjct: 301 NGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ ++ + + + P ++TY SL+ G CK+G + A +++ +M RG P
Sbjct: 361 CKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDI 420
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ K V+ A+ L K+ + G P+ TY IL+ LCK +L+ A + ++
Sbjct: 421 ITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFED 480
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ +G ++ ++T T++I C FDEA + M +P +T++
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYE 529
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 154/328 (46%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ C+ G + A K L + P N + G+ + A F +
Sbjct: 108 FNILINCFCQLGLIPFAFSVL--AKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDK 165
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + V+YGTL+ G C++ A+ L++ + + ++ + ++Y+T+ID + +
Sbjct: 166 LVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKN 225
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + +VTY++L+ G+C G L+ A + M S P T+N
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G+V++A N M++ G PD +TY+ L+ C +++++A + M RG
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + ++I+ C++ D+A F++M + + P+ +T+ L D K G + A
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405
Query: 375 KLCNVMS------SVPRSMELLDSRCKD 396
+L ++M + +LD+ CK+
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKN 433
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L Q+ P + +L +SK+ + +M + PN V + L+ +C+L +
Sbjct: 62 LRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLI 121
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A ++ ++ K G EP+ I NT I G G+ + ++ + V+Y +L
Sbjct: 122 PFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTL 181
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK G+ A ++L+ + + Y+ K V DA +LY +M+
Sbjct: 182 INGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRI 241
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+ + +TY L+ C KL AI + +M + D+ T +L+ C+ + EA
Sbjct: 242 SSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKN 301
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
M+++G+ P +T+ L D + +A+ + N MS
Sbjct: 302 GLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%)
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +V DA + + ++N TP + +G ++ + + + L ++M GI+PN
Sbjct: 45 FHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPN 104
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ +N +I+ + G ++ + L P +T + +KG+C G + A
Sbjct: 105 FVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHD 164
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+++ GF +Y K G+ A+ L R++ D + Y ++ +CK+
Sbjct: 165 KLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK 224
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ A + EM R ++ T + LI C + K +A F M + P TF
Sbjct: 225 NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 284
Query: 359 RLNDEFKKRG 368
L D F K G
Sbjct: 285 ILVDAFCKEG 294
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 104/220 (47%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ L + ++ P + + ++ LV++ + V + ++ P V + L+
Sbjct: 54 AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
+C+ G + A +L ++ G+ P T N F + F G++ A+N + K++ G+
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D+++Y L+ LCK + A+++ + + + +D+ + +I +C+ ++A +
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+M+ R + + +T+ L F G A L N M+S
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 185/390 (47%), Gaps = 25/390 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L A +++ A+ ++ + IG +PD T+ ++ A +E A FE
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPD---TSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+V + + + I++DS CK G ++ A ++F++ +E+ P V Y L++ + ++
Sbjct: 513 GLVADVYT----YTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKA 566
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M E PN+VTY L++G+C+ +V++A ++ + M
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
PN + Y ++DG ++ R EE +++ + P + Y +L+ G CK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A ++ M GF + TY+ + K + + A + KM+E+ P+ +
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LCK K D A ++ + M+ +GC ++ T T +I + K + E M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+G+ P+Y+T++ L D K G +A L
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 184/411 (44%), Gaps = 60/411 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF-- 58
+I KAK+ A L + +P+ V T+ LI + +AG VE A FE
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIV---TYSALIDGHCKAGQVEKACQIFERMC 615
Query: 59 ----ANNLDM-VKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELD----QS 104
++DM K +D + + LLD CK RV+ A RK LD +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA------RKLLDAMSMEG 669
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P VY+ L++G + + +A+ EM + + TY +L++ Y +++R D A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+++ +M + PN ++Y +IDGL + G+ +E +M+ P +VTYT+++ G+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------- 271
G +E ++L+ M S+G P+ TY + K G ++ A NL
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 272 --YRKMIES------------------GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YRK+IE P Y +L+ L K +L++A+++ +E+
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 312 CRGCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +ST LI LC K + A F +M ++G++P +F L
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 182/434 (41%), Gaps = 58/434 (13%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDF---VSKDTFVILIRRYARAGMVEAAIWTFEF 58
+ VL + + ++ + L+++G + DF S+ T+ LI+ + +A +++A
Sbjct: 203 LNVLVRKHCRNGSFSIALEELG--RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + N SLCK G+ + A +++ P Y L++G
Sbjct: 261 MS----LANLRMDGFTLRCFAYSLCKVGKWREALTLVET-----ENFVPDTVFYTKLISG 311
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++A F MR + PNVVTY TL+ G +++ R R++ M EG P+
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV----------------- 221
++N+++ +G ++++ + C P V Y L+
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 222 --KGY----------------------CKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
K Y C AG E A +++ MI +GF+P +TY+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
Y K+E A L+ +M G D TY I++ CK ++ A + EM+ GC
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T T LIH + K A+ FE M+ G +P+ +T+ L D K G +K C
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV---EKAC 608
Query: 378 NVMSSVPRSMELLD 391
+ + S ++ D
Sbjct: 609 QIFERMCGSKDVPD 622
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 37/300 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D LCK G++ A E K + + + T+ Y+ L++ +F+ K A +
Sbjct: 676 VYDALIDGLCKVGKLDEAQEV--KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + PNVV Y +++G C++ + D A +L++ M ++G +PN + Y +IDG G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E ++ER P VTY L+ CK G L+ A +L+ M + Y
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 254 YFFRYFSK-----------FGKVEDA--MNLYRKMIESGYTPDRL--------------- 285
F+K G+ + A +++YR +I++ RL
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 286 -------TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
TY+ L++ LC +K++ A Q+ EM +G ++ + LI L R K EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D LCK G+ A + +E + P V Y +++G+ ++
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR-------------------KEG 174
M + V PN VTY L++ C+ +D A L++EM+ KE
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 863
Query: 175 IE--------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV----T 216
IE P VY +ID L++A R E ++E V T+V T
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSST 921
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
Y SL++ C A +E A ++ M +G +P ++ + + K+ +A+ L
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 3/256 (1%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ T VYN L++ R + K E F ++R ++ LV +CR A+
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 220
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ ++ P+ YN +I ++A R + S + + T
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 280
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G A L ++ + F+P Y + E+AM+ +M + P+
Sbjct: 281 CKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY LL + +L +V M GC L+H C A +
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397
Query: 345 MIRRGLVPHYLTFKRL 360
M++ G +P Y+ + L
Sbjct: 398 MVKCGHMPGYVVYNIL 413
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 4/313 (1%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ F + I+L LC+ G V A R+ +S +P + YN L+NG ++K +
Sbjct: 138 RGFTVNVFIMNIVLKGLCRNGGVFEAMGLI--REMGRKSVSPDIVSYNTLINGLCKAKKL 195
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K+A LEM PN VT TL++G C+ R+D A+ L++ M+K+G + + ++Y T+
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I G G + + + L +VTY+ LV G C+ G + A+ +L M G
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TY K G+ AM+L M+E G P +TY++LL LCKE + A +
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 375
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI--RRGLVPHYLTFKRLNDE 363
+ + M +G D+ T L+ LC K DEA F M L P+ TF L
Sbjct: 376 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 435
Query: 364 FKKRGMTALAQKL 376
K G A K+
Sbjct: 436 LCKEGRLTKAVKI 448
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 4/297 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L++ G V+ A+ F + D + F +L+ LCK+GR+ A +
Sbjct: 391 TYNTLMKGLCDKGKVDEALKLFN--SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 448
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
RK + + + YN+LL G ++ +K+A W ++ PN TY L++G+
Sbjct: 449 --HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++R ++ A L EMR G+ P YNT++ L + G E+ + + P +
Sbjct: 507 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 566
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+++ +++ G KAGD + ++ M+ G P T++ SK G++++A + +
Sbjct: 567 ISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALER 626
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M+ SG+TPD L Y LLK L + I + +M +G +D + ++ LC
Sbjct: 627 MVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 683
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 4/308 (1%)
Query: 75 FEILLDSLCKQ--GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
E L SLC++ + A FH LD + P+ N L++ RS+N A +
Sbjct: 40 LETQLRSLCQKPNSQFTEAVSLFHS--ALDFNLLPSWATCNFLVDALARSRNYGLAFSVY 97
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M +V P+ + L+E + ++ +V + K G N + N V+ GL
Sbjct: 98 RRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRN 157
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G E G++ P +V+Y +L+ G CKA L+ A +L M + G P+ T
Sbjct: 158 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 217
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
K G++++AM L M + G+ D + Y L+ C LD ++ EM
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 277
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G ++ T + L+H LCR+ ++ EA+ M G+ P +T+ L D K G
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337
Query: 373 AQKLCNVM 380
A L N+M
Sbjct: 338 AMDLLNLM 345
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 175/379 (46%), Gaps = 15/379 (3%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
+L+ + H + PD V T+ LI + G A+ NL + K + +
Sbjct: 306 VLNAMAEHGIHPDVV---TYTGLIDGLCKDGRATHAMDLL----NLMVEKGEEPSNVTYN 358
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM- 135
+LL LCK+G V A + R +++ V YN L+ G V +A + + M
Sbjct: 359 VLLSGLCKEGLVIDAFKIL--RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 136 RKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
EN + PNV T+ L+ G C+ R+ +A+++ ++M K+G N + YN ++ G ++AG+
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + ++ L P TY+ L+ G+CK L A + M + G P+ YN
Sbjct: 477 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 536
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +E A +L+++M + PD ++++ ++ K ++ +M G
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T + LI+ L ++ + DEA + E M+ G P L + L +G T
Sbjct: 597 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT--- 653
Query: 375 KLCNVMSSVPRSMELLDSR 393
++ N++ + +LD +
Sbjct: 654 EIINLLHQMAAKGTVLDRK 672
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 157/343 (45%), Gaps = 7/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
F LI + G ++ A E +MV+N + L+D LCK+G + A
Sbjct: 890 NFTSLIDGLCKKGSIKQAFEMLE-----EMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 944
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F K D ++ P V Y ++ G+ + + AE + M+++ + PNV TY TL+ G
Sbjct: 945 LFLKLVRSD-TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 1003
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C+ RA L+ M EG PN YN ID L + R E ++ + C
Sbjct: 1004 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 1063
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VTYT L++ CK D+ A M GF N F + K++++ L++
Sbjct: 1064 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 1123
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
++ G P + TY ++ CKE +DLA++ MK GC D T LI LC+
Sbjct: 1124 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 1183
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DEA +E MI RGL P +T L E+ KR +A A L
Sbjct: 1184 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 1226
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 53/341 (15%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ + DSL G ++ A E V +L + + +A +
Sbjct: 730 LYLVTADSLLANGNLQKAHE-----------------VMRCMLRNFSEIGRLNEAVGMVM 772
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+ + +TP+ +T ++E L ++ A + EM G+ P++ Y ++ G G
Sbjct: 773 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 832
Query: 194 RFEE----VSGMMERFLV-------------CEPG------------------PTMVTYT 218
+ +E ++GM++R + CE G P ++ +T
Sbjct: 833 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 892
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL+ G CK G ++ A ++L+ M+ G+ P+ T+ K G E A L+ K++ S
Sbjct: 893 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 952
Query: 279 G-YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
Y P+ TY ++ CKEDKL+ A + MK +G +++T T LI+ C+ F
Sbjct: 953 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 1012
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
A M G +P+ T+ D K+ A +L N
Sbjct: 1013 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P Y +++ G FR +++A+R+ M + P+ T ++ C V+RAI
Sbjct: 816 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 875
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++M G +PN I + ++IDGL + G ++ M+E + P + T+T+L+ G CK
Sbjct: 876 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 935
Query: 227 AGDLEGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G E A ++ LK++ S + P+ TY + K K+ A L+ +M E G P+
Sbjct: 936 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 995
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ CK A ++ M G ++ T I LC+ + EA
Sbjct: 996 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 1055
Query: 346 IRRGLVPHYLTFKRLNDE 363
GL +T+ L E
Sbjct: 1056 FSCGLEADGVTYTILIQE 1073
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ + + R++ A+ +V +M+ +G+ P++I N V++ VE G E + + V
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +Y +V G + G ++ A + L MI RGF+P T + G V A+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+RKMI+ G+ P+ + + L+ LCK+ + A ++ +EM G ++ T T LI L
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933
Query: 330 C---------RMY---------------------------KFDEASAEFEDMIRRGLVPH 353
C R++ K + A F M +GL P+
Sbjct: 934 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVM 380
T+ L + K G A +L N+M
Sbjct: 994 VNTYTTLINGHCKAGSFGRAYELMNLM 1020
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ CKQ + A +F + + + +R+ NIL+ + R K +K++ER +
Sbjct: 1067 YTILIQEQCKQNDINQALAFFCRMNK--TGFEADMRLNNILIAAFCRQKKMKESERLFQL 1124
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + P TY +++ YC+ +D A++ M++ G P++ Y ++I GL +
Sbjct: 1125 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 1184
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P VT +L YCK D A +L+ + + ++ + T
Sbjct: 1185 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT--- 1241
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
R KV A ++K++E + DR+T + K +L +++ +
Sbjct: 1242 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 1297
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 179/380 (47%), Gaps = 9/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+++ ++A + +PD + T+ ++ Y +AG ++ A+W
Sbjct: 355 IIHGLLKSEQVEAAQLKFAEMRAMGLLPDLI---TYNSMLNGYCKAGNLKEALWLLGDLR 411
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D C+ G ++ A K + ++Q P V Y IL+NG
Sbjct: 412 RAGLAPTVLT----YNTLIDGYCRLGGLEEARRL--KEEMVEQGCFPDVCTYTILMNGSH 465
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +N+ A F+ EM + + P+ Y T + L +A +L + M +GI P+ +
Sbjct: 466 KVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTV 525
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +IDGL + G ++ + + + P +TYT L+ +C+ G L A K+L M
Sbjct: 526 TYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGM 585
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+S G PS TY + G + A +RKM++ G P+ +TY++L+ LC+ +
Sbjct: 586 VSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRT 645
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LA EM RG + T T+LI CR + +A + +M + G+ P Y T L
Sbjct: 646 LLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNAL 705
Query: 361 NDEFKKRGMTALAQKLCNVM 380
F K M + L N++
Sbjct: 706 FKGFDKGHMYHAIEYLENIV 725
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 9/311 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L ++G ++ A++ + ++ + T YN L+ V+ E +E
Sbjct: 283 YNVVISFLAREGHLENAAKLVDSMRLSKKASSFT---YNPLITALLERGFVQKVEALQME 339
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E + P +VTY ++ G + +V+ A EMR G+ P+ I YN++++G +AG
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ PT++TY +L+ GYC+ G LE A ++ + M+ +G P TY
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL---DLAIQVSKEMK 311
K + A + +M+ G PD Y+ +C E L A Q+ + M
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTR---ICAELILGDTHKAFQLREVMM 516
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D T ++I LC+ +A M+ GL P +T+ L +RG+ +
Sbjct: 517 LKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLS 576
Query: 372 LAQKLCNVMSS 382
A+KL N M S
Sbjct: 577 EARKLLNGMVS 587
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 3/257 (1%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE--NVTPNVVTYGTLVEGYC 155
R+ L PT+ YN LL+ + + +A EM + N VTY ++
Sbjct: 232 REMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLA 291
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R ++ A +LV MR + ++ YN +I L+E G ++V + PT+V
Sbjct: 292 REGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLV 350
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +++ G K+ +E A M + G LP TYN + K G +++A+ L +
Sbjct: 351 TYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDL 410
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+G P LTY+ L+ C+ L+ A ++ +EM +GC D+ T T+L++ ++
Sbjct: 411 RRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNL 470
Query: 336 DEASAEFEDMIRRGLVP 352
A F++M+ +GL P
Sbjct: 471 PMAREFFDEMLSKGLQP 487
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 36/240 (15%)
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G+ P+ N V+ L +A R+++V + L E PT+VTY +L+ + K G +
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261
Query: 233 ASKILKMMISR--GFLPSPTTYNYFFRYFSKFGKVE------DAMNLYRK---------- 274
AS +LK M ++ G L + TYN + ++ G +E D+M L +K
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLI 321
Query: 275 --MIESGYT----------------PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
++E G+ P +TY+ ++ L K ++++ A EM+ G
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DL T +++ C+ EA D+ R GL P LT+ L D + + G A++L
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ G P N R + +D +YR+M++ P +TY+ LL KE
Sbjct: 197 RVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKE 256
Query: 298 DKLDLAIQVSKEMKCR--GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ D A + KEM+ + GC ++ T ++I L R + A A+ D +R
Sbjct: 257 GRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENA-AKLVDSMRLSKKASSF 315
Query: 356 TFKRLNDEFKKRGMTALAQKL 376
T+ L +RG + L
Sbjct: 316 TYNPLITALLERGFVQKVEAL 336
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 172/360 (47%), Gaps = 12/360 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF LIR G + A+ F+ M+ + F + L++ L
Sbjct: 121 GHQ-PD---PTTFTTLIRGLCVEGKIGEALHLFD-----KMIDEGFQPNVVTYGTLINGL 171
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G AA ++ + P V +Y +++ + + V +A + +M + ++P
Sbjct: 172 CKVGNTSAAIRLLRSMEQ--GNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 229
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ TY +LV C L L+ +M I P+ ++++TV+D L + G+ E ++
Sbjct: 230 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 289
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P +VTYT+L+ G+C +++ A K+ MM+ +GF P +Y + K
Sbjct: 290 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
K++ AM L+ +M + PD TY+ L+ LC +L AI + EM RG DL T
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++L+ LC+ +EA A + + L P + + D + G A+ L + +SS
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 159/342 (46%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G AAI N ++ ++DSLCK +V A
Sbjct: 163 TYGTLINGLCKVGNTSAAIRLLRSMEQ----GNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + Q +P + Y L++ K +M + P+VV + T+V+
Sbjct: 219 FSQM--VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +V A +V M + G+EP+ + Y T++DG +E + + + P +
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
++YT+L+ GYCK ++ A + + M + ++P TYN G+++DA+ L+ +
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G PD +TY ILL LCK L+ A+ + K ++ + D+ ++I +CR +
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ A F ++ +GL P T+ + KRG+ A KL
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 39/292 (13%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F ++D+LCK+G+V A E + + P V Y L++G + +A + +
Sbjct: 268 IFSTVVDALCKEGKVTEAHEIVDMM--IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEA 192
M ++ P+V++Y TL+ GYC++ ++D+A+ L +EM RKE I P+ YNT++ GL
Sbjct: 326 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDTKTYNTLMHGLCHV 384
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSL-------------------------------- 220
GR ++ + + P +VTY+ L
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444
Query: 221 ---VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+ G C+AG+LE A + + S+G PS TYN K G + +A L+ +M
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 504
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ +PD TY+ + + + ++ AIQ+ +EM RG D+ T+T+L+ +L
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V +++ +++ + V +A M + V P+VVTY TL++G+C +D A+++
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M ++G P+ I Y T+I+G + + ++ + E E P TY +L+ G C
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A + M++RG +P TY+ K +E+AM L + + S PD
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+I++ +C+ +L+ A + + +G + T ++IH LC+ +EA+ F +M
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P T+ + F + T A +L M
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 537
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 4/293 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F LL S+ K +K S ++D P V NIL+N + V A
Sbjct: 59 FAKLLTSIAK---MKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLA 115
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++ K P+ T+ TL+ G C ++ A+ L +M EG +PN + Y T+I+GL + G
Sbjct: 116 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVG 175
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ P +V YTS++ CK + A + M+ +G P TY
Sbjct: 176 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 235
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + L +M+ S PD + + ++ LCKE K+ A ++ M R
Sbjct: 236 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
G + D+ T T L+ C + DEA F+ M+R+G P +++ L + + K
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 348
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 10/261 (3%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P++V + L+ +++ + L +M G+ PN N +I+ R +
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + L P T+T+L++G C G + A + MI GF P+ TY K
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G A+ L R M + PD + Y ++ LCK+ ++ A + +M +G D+ T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T L+H LC + ++ + M+ ++P + F + D K G A ++ ++M
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM- 292
Query: 382 SVPRSME--------LLDSRC 394
+ R +E L+D C
Sbjct: 293 -IQRGVEPDVVTYTTLMDGHC 312
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 11/237 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD +S + LI Y + ++ A++ FE +M K + + L+ LC G
Sbjct: 334 PDVIS---YTTLINGYCKIHKIDKAMYLFE-----EMCRKEWIPDTKTYNTLMHGLCHVG 385
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R++ A FH+ Q P + Y+ILL+ ++ ++++A + N+ P++
Sbjct: 386 RLQDAIALFHEMVARGQ--MPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +++G CR ++ A L + +G+ P+ YN +I GL + G E + +
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P TY ++ +G+ + + A ++L+ M++RGF +T S G
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 47/211 (22%)
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R L P P++V + L+ K + M S G P+ T N F
Sbjct: 46 RLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLN 105
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL----------------------- 300
+V A ++ K+++ G+ PD T+ L++ LC E K+
Sbjct: 106 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYG 165
Query: 301 ------------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
AI++ + M+ C D+ T +I LC+ + EA F M+ +
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 225
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
G+ P T+ T+L LCN+
Sbjct: 226 GISPDIFTY------------TSLVHALCNL 244
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 9/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A + W L G +PD + TF I + +A +AA FE
Sbjct: 214 LLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTF---IEAHCKARDFDAAKKVFEEMR 270
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D N + +++ LC+ G V+ A + K + +D +P Y L+NG
Sbjct: 271 RRDCAMN----EVTYNVMISGLCRSGAVEEA--FGFKEEMVDYGLSPDAFTYGALMNGLC 324
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +K+A+ EM + PN+V YGTLV+G+ + + A ++KEM G++PN I
Sbjct: 325 KGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKI 384
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y+ +I GL + G+ S +++ + P TY L++G+ + D +GA ++L M
Sbjct: 385 MYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G LP+ +Y + G+ ++A NL +MI G P+ Y L+ KE +
Sbjct: 445 RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LA + ++M DL LI L + + +EA + + +RGLVP T+ L
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+ K G A +L M
Sbjct: 565 IHGYCKTGNLEKADQLLRQM 584
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 51/368 (13%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+ LCK G++ AS+ ++ + P YN L+ G F+ + A
Sbjct: 385 MYDNLIRGLCKIGQLGRASKLL--KEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLN 442
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY----------- 182
EMR + PNV +YG ++ G C+ A L++EM EG++PNA +Y
Sbjct: 443 EMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG 502
Query: 183 ------------------------NTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTM 214
N++I GL GR EE + + +R LV P
Sbjct: 503 NISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLV----PDE 558
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY+ L+ GYCK G+LE A ++L+ M++ G P+ TY + K E ++ +
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQS 618
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ SG PD Y I+++ L + + +++A V E++ G DL + LI LC++
Sbjct: 619 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD 678
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---E 388
++A ++M + GL P + + L D F + G + A+ + + + + VP +
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738
Query: 389 LLDSRCKD 396
L+D CK+
Sbjct: 739 LIDGNCKN 746
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 144/299 (48%), Gaps = 3/299 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ CK G ++ A + R+ L+ P Y LL G+F+S + + M
Sbjct: 564 LIHGYCKTGNLEKADQLL--RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P+ YG ++ R ++ A ++ E+ K G+ P+ +Y+++I GL + E+
Sbjct: 622 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEK 681
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
G+++ P +V Y +L+ G+C++GD+ A + ++++G +P+ TY
Sbjct: 682 AVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALID 741
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G + DA +LY++M++ G PD Y++L L+ A+ +++EM RG
Sbjct: 742 GNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-A 800
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ L+H C+ K E M+ R +VP+ T +++ EF K G A ++
Sbjct: 801 NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRV 859
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 152/336 (45%), Gaps = 37/336 (11%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ ++L+D+ K G V+ A++ +L APT R N LL R+ ++ +
Sbjct: 174 AVLDVLVDTYKKTGSVRNAAQVVLMMADL--GLAPTRRCCNGLLKDLLRADAMELLWKLK 231
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M + P+V TY T +E +C+ R D A ++ +EMR+ N + YN +I GL +
Sbjct: 232 GFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 291
Query: 193 GRFEEVSGMMERFL-----------------VCEPG------------------PTMVTY 217
G EE G E + +C+ P +V Y
Sbjct: 292 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVY 351
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+LV G+ K G A ILK MIS G P+ Y+ R K G++ A L ++MI+
Sbjct: 352 GTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIK 411
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G PD TY+ L++ ++ D A ++ EM+ G ++ + ++I+ LC+ + E
Sbjct: 412 VGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKE 471
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
A E+MI GL P+ + L K G +LA
Sbjct: 472 AGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLA 507
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+++ LC+ G K A + + + P +Y L+ G + N+ A +
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEM--ISEGLKPNAFMYAPLIIGHSKEGNISLACEALEK 513
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K NV P++ Y +L++G + R++ A +++K G+ P+ Y+ +I G + G
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ ++ + L P TYT L++GY K+ D E S IL+ M+ G P Y
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R S+ +E A + ++ ++G PD Y L+ LCK ++ A+ + EM G
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ + LI CR A F+ ++ +GLVP+ +T+ L D K G
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNG 747
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 147/346 (42%), Gaps = 30/346 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + T+ LI Y + G +E A N + N D+ + LL+ K
Sbjct: 555 VPD---EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT----YTDLLEGYFKSN 607
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ S L P +Y I++ RS+N++ A E+ K + P++
Sbjct: 608 DYEKVSSILQSM--LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 665
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +L+ G C++ +++A+ L+ EM KEG+EP + YN +IDG +G + + L
Sbjct: 666 YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 725
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P VTYT+L+ G CK GD+ A + K M+ RG P YN S +E
Sbjct: 726 AKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLE 785
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ L +M GY L ++ L+ CK KL ++ M R + T ++
Sbjct: 786 QALFLTEEMFNRGYANVSL-FNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844
Query: 327 HLLCRMYKFDEA--------------------SAEFEDMIRRGLVP 352
+ K EA S F DMI +GL+P
Sbjct: 845 SEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKGLIP 890
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 151/344 (43%), Gaps = 38/344 (11%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A ++ L+ K+G + A E K + + P + YN L+ G +++AE +
Sbjct: 488 AFMYAPLIIGHSKEGNISLACEALEKMTK--ANVHPDLFCYNSLIKGLSTVGRMEEAEEY 545
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ +++K + P+ TY L+ GYC+ +++A +L+++M G++PNA Y +++G +
Sbjct: 546 YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFK 605
Query: 192 AGRFEEVSGMMERFL---------------------------------VCEPG--PTMVT 216
+ +E+VS +++ L V + G P +
Sbjct: 606 SNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 665
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y+SL+ G CK D+E A +L M G P YN F + G + A N++ ++
Sbjct: 666 YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 725
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G P+ +TY L+ CK + A + KEM RG D +L +
Sbjct: 726 AKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLE 785
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A E+M RG L F L F KRG +KL +VM
Sbjct: 786 QALFLTEEMFNRGYANVSL-FNTLVHGFCKRGKLQETEKLLHVM 828
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 6/253 (2%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+ R + +P+ LV+ Y + V A ++V M G+ P N ++ L+ A
Sbjct: 163 DHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRAD 222
Query: 194 RFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
E ++ G ME + P + TY++ ++ +CKA D + A K+ + M R +
Sbjct: 223 AMELLWKLKGFMEGAGIL---PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEV 279
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN + G VE+A +M++ G +PD TY L+ LCK +L A + EM
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
C G ++ L+ + K EA ++MI G+ P+ + + L K G
Sbjct: 340 SCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQL 399
Query: 371 ALAQKLCNVMSSV 383
A KL M V
Sbjct: 400 GRASKLLKEMIKV 412
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+S +P+ V ++L++ + ++ +V++A + L M + P L++ R ++
Sbjct: 167 RSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMEL 226
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+L M GI P+ Y+T I+ +A F+ + E + VTY ++
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS 286
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G C++G +E A + M+ G P TY K ++++A L +M SG P
Sbjct: 287 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKP 346
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ + Y L+ KE K A + KEM G + LI LC++ + AS
Sbjct: 347 NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 406
Query: 343 EDMIRRGLVPHYLTFKRL 360
++MI+ GL P T+ L
Sbjct: 407 KEMIKVGLRPDTFTYNPL 424
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 23/228 (10%)
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT------------------ 218
P+A + + L A F + +G++ + ++ P P +V +
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPS 172
Query: 219 -----SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
LV Y K G + A++++ MM G P+ N + + +E L
Sbjct: 173 TAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKG 232
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M +G PD TY ++ CK D A +V +EM+ R C ++ T ++I LCR
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+EA E+M+ GL P T+ L + K A+ L + MS
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 181/386 (46%), Gaps = 16/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA++ D A +L PD + T+ +LI ++G VEAA F+
Sbjct: 167 LIHGLCKARKMDCALEMLAQMKKAFCTPDTI---TYNVLIDGLCKSGDVEAARAFFD--- 220
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ ++G + IL+ CK G AAS + ++ + Y ++
Sbjct: 221 -----EMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN-GCTIDIHTYTAIV 274
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ ++K +++A ++ TP + TY L+ G C++ R++ AI L++++ G
Sbjct: 275 DWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 334
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ + Y ++IDGL + R E + + + V YT+L++ + G + AS +
Sbjct: 335 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 394
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M S G +P T + SK G++ A+ +++ M G P+ + Y L+ LCK
Sbjct: 395 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 454
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
K+D A+++ +MK C D T +LI LC+ + A A F++M+ G P T
Sbjct: 455 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 514
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L F K G T A + + MSS
Sbjct: 515 YNILISGFCKAGNTDAACGVFDDMSS 540
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 148/340 (43%), Gaps = 38/340 (11%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK--------- 123
+ + LL+ LCK GR++ A + RK +D P V Y L++G + K
Sbjct: 22 ATYNALLNGLCKMGRLEEAIDLL--RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 79
Query: 124 --------------------------NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ A + M P+VVT T+++G +
Sbjct: 80 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 139
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
R+ A+R+ K M G+ PN +VY+ +I GL +A + + M+ + P +TY
Sbjct: 140 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 199
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN-LYRKMI 276
L+ G CK+GD+E A M+ G P TYN F K G + A + L ++
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETT 259
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+G T D TY ++ L K K++ A+ + +++ GC + T L++ LC+M + +
Sbjct: 260 INGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 319
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA ++ G P +T+ L D K + A KL
Sbjct: 320 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ + LL+ LCK GR++ A + RK +D P V Y L++G + K +A + +
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLL--RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + + V Y L+ + ++ +A + K M G P+ + +T+IDGL +A
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR + + P V Y++L+ G CKA ++ A ++L M P TY
Sbjct: 421 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N K G VE A + +M+E+G PD TY+IL+ CK D A V +M
Sbjct: 481 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSS 540
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
C ++ T LI LC+ + +AS F+ M RG
Sbjct: 541 SRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 36/302 (11%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
PT+ YN LLNG + +++A ++ TP+VVTY +L++G + +R
Sbjct: 15 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 74
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A +L KEM G+ + + Y +I L++ G+ + S + + P +VT ++++
Sbjct: 75 AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 134
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPT-------------------------------- 250
G KAG + A +I K M +RG P+
Sbjct: 135 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 194
Query: 251 ---TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ-V 306
TYN K G VE A + +M+E+G PD TY+IL+ CK D A +
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL 254
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++E GC ID+ T T ++ L + K +EA A E + G P T+ L + K
Sbjct: 255 AQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK 314
Query: 367 RG 368
G
Sbjct: 315 MG 316
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+++A ++ TP + TY L+ G C++ R++ AI L++++ G P+ + Y +
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+IDGL + R E + + + V YT+L++ + G + AS + K M S G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+P T + SK G++ A+ +++ M G P+ + Y L+ LCK K+D A+
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ +MK C D T +LI LC+ + A A F++M+ G P T+ L F
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 365 KKRGMTALAQ 374
K G T A
Sbjct: 242 CKAGNTDAAS 251
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 152/299 (50%), Gaps = 9/299 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW--APTVRVYNILLNGWFR---SKNVKDAE 129
F ++ LC+ G+++ A + K +W AP+V YN L++G+ + + N+ +
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIK----AWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + ++P VT+G L+ GYC+ A+R+ +EM+++GI + + YN++I GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ EE +ME P +T+ ++KG+CK G + A+ + M R P
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
YN + + GK+EDAM + M + G +P+ TY+ L+ + A + E
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
MK +G + D+ T +LI LC + +A ++M GL P++LT+ + F +G
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 4/300 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A F +L++ CK AA F + K+ Q A +V YN L++G V++ +
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQ--QGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM ++PN +T+G +++G+C+ + A + M + +EP+ ++YN +ID
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E+ + E P + TY L+ G+ ++GD AS +L M +G T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM- 310
YN G+V A+ L +M E G P+ LTY+ +++ C + + A ++ M
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
KCR ++ T + I C++ K DEA+ +M+ + LVP+ +T++ + + ++G T
Sbjct: 502 KCRK-RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++L+ +L + + A + F E P+ N LL G +K V AE+ +
Sbjct: 121 IADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFR 180
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE-- 191
+ V+P++ T+ T++ G CR+ ++ +A + K+++ G+ P+ YN++IDG +
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240
Query: 192 -AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AG V +++ + PT VT+ L+ GYCK + A ++ + M +G S
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN GKVE+ + L +M + G +P+ +T+ +LK CK+ + A M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
R + D+ +LI + R+ K ++A A E M ++G+ P+ T+ L F + G
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 145/317 (45%), Gaps = 11/317 (3%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S LL L RV A + F R L + +P + +N +++G R ++ A
Sbjct: 157 SSVNALLAGLVGAKRVDLAEKAF--RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 133 LEMRKENVTPNVVTYGTLVEGYCR------LRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+++ + P+V TY +L++GYC+ + VD L+KEM + GI P A+ + +I
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLI 271
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G + + E ++VTY SL+ G C G +E K+++ M G
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ T+ + F K G + DA + M E PD + Y+IL+ + + K++ A+ V
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ M +G ++ T LI R + AS ++M +G+ +T+ L
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451
Query: 367 RGMTALAQKLCNVMSSV 383
+G A KL + MS V
Sbjct: 452 KGEVRKAVKLLDEMSEV 468
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 8/280 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI Y + AA+ FE + + + L+ LC +G+V+ +
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQ----QGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ ++L S P + +L G+ + + DA + M + NV P+VV Y L++ Y
Sbjct: 322 MEEMEDLGLS--PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY 379
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RL +++ A+ + + M K+GI PN YN +I G +G + SG+++ +
Sbjct: 380 RRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADV 439
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ C G++ A K+L M G P+ TYN + F G ++ A + +
Sbjct: 440 VTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM--KC 312
M + + +TY++ +K C+ K+D A + EM KC
Sbjct: 500 MEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI G VE + E +L + N + F +L CK+G + A+++
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT----FGCVLKGFCKKGMMADANDW 356
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
E ++ P V +YNIL++ + R ++DA M K+ ++PNV TY L+ G+
Sbjct: 357 IDGMTE--RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R A L+ EM+++GIE + + YN +I L G + +++ P
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY ++++G+C G+++ A +I M + TYN F +YF + GK+++A +L +
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNE 534
Query: 275 MI-------------------ESGYTPD 283
M+ E GYTPD
Sbjct: 535 MLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI ++R+G +A + K ++ + +L+ +LC +G V+ A +
Sbjct: 406 TYNCLITGFSRSGDWRSASGLLDEMKE----KGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ E+ P YN ++ G+ N+K A M K NVVTY ++ +
Sbjct: 462 LDEMSEV--GLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
C++ ++D A L+ EM + + PN I Y T+ +G++E G ++ G
Sbjct: 520 CQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 7/329 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L SLC+ R + A + H + +P V YN +++G+FR V A + E
Sbjct: 193 YSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHE 252
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V P+VVTY + ++ C+ R +D+A ++++M G EP+ + YN +I G G+
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQ 312
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E +GM P + T S + CK G + A++ M ++G P TY+
Sbjct: 313 WKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSV 372
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G V D +NL+ M +G D Y+IL+ K +D A+ + +M+ RG
Sbjct: 373 LLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERG 432
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T +I RM + +A +F MI GL P + + L F G A+
Sbjct: 433 VMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAK 492
Query: 375 KLCNVMSS--VPRS-----MELLDSRCKD 396
+L + M S +PR +++S CK+
Sbjct: 493 ELISEMMSRGIPRPNTVFFNSIINSLCKE 521
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 178/390 (45%), Gaps = 12/390 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I L KA+ D A +L I PD K T+ +I Y+ G + F
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPD---KVTYNCMIHGYSILGQWKETAGMFREMTR 325
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
++ + + S + SLCK G+ K A+E+F + P + Y++LL+G+
Sbjct: 326 RGLMPDIFTCNSY----MSSLCKHGKSKEAAEFFDSMAA--KGHKPDLVTYSVLLHGYAA 379
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
V D + M + + Y L++ Y + +D A+ + +M++ G+ P+A
Sbjct: 380 EGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWT 439
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y TVI GR + + + P + Y SL++G+C G+L A +++ M+
Sbjct: 440 YGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMM 499
Query: 242 SRGFLPSPTT--YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
SRG +P P T +N K G+V +A +++ +I G PD +T++ L+ K
Sbjct: 500 SRG-IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A V M G + D+ T + L+ CR + D+ F +M+ +G+ P +T+
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ G T A+K+C+ M +M++
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 170/360 (47%), Gaps = 9/360 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ ILI Y + GM++ A+ F ++ + A + ++ + + GR+ A + F
Sbjct: 405 YNILIDAYGKRGMMDEAMLIFTQMQERGVMPD----AWTYGTVIAAFSRMGRLADAMDKF 460
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT-PNVVTYGTLVEGY 154
++ + P VYN L+ G+ N+ A+ EM + PN V + +++
Sbjct: 461 NQM--IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL 518
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ RV A + + G P+ I +N++IDG G+ E+ G+++ + P +
Sbjct: 519 CKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDV 578
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY++L+ GYC+ G ++ + + M+S+G P+ TY G+ A + +
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MIESG T D T I+L LC+ + D AI + K++ ++ +I + ++ K
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM--SSVPRSMELLDS 392
+EA+ F+ + GLVP+ T+ + K G A + ++M S S LL++
Sbjct: 699 REEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNN 758
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 5/308 (1%)
Query: 76 EILLDSLCKQGRVK-AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
ILL LC R A + H+ EL P Y+ +L + A
Sbjct: 158 NILLKCLCHAKRSDDAVNVLLHRMPEL--GVEPDTISYSTVLKSLCEDSRSQRALDLLHT 215
Query: 135 MRKEN--VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M K++ +PNVV+Y T++ G+ R V +A L EM ++G+ P+ + Y++ ID L +A
Sbjct: 216 MVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKA 275
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
++ ++ + + P VTY ++ GY G + + + + M RG +P T
Sbjct: 276 RAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTC 335
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + K GK ++A + M G+ PD +TY +LL E + + + M+
Sbjct: 336 NSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEG 395
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
G D +LI + DEA F M RG++P T+ + F + G A
Sbjct: 396 NGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLAD 455
Query: 373 AQKLCNVM 380
A N M
Sbjct: 456 AMDKFNQM 463
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E R P V TY L++ CR R L K G++ + IV N ++ L A
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAK 168
Query: 194 RFEE-VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI--SRGFLPSPT 250
R ++ V+ ++ R P ++Y++++K C+ + A +L M+ S G P+
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+YN F + G+V A NL+ +M++ G PD +TY + LCK +D A V ++M
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G + D T +IH + ++ E + F +M RRGL+P T K G +
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348
Query: 371 ALAQKLCNVMSS 382
A + + M++
Sbjct: 349 KEAAEFFDSMAA 360
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 9/274 (3%)
Query: 26 EVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
E PD + TF LI Y G +E A + ++ + + LLD C+
Sbjct: 539 ERPDVI---TFNSLIDGYGLVGKMEKAFGVLDAMISV----GIEPDVVTYSALLDGYCRN 591
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+ F R+ L + PT Y I+L+G F A++ EM + T ++
Sbjct: 592 GRIDDGLILF--REMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T G ++ G CR D AI L K++ ++ N + NT+ID + + + EE + + +
Sbjct: 650 TCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI 709
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P TY ++ K G +E A + +M G PS N R + G++
Sbjct: 710 SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEI 769
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
A N K+ + + T ++L + ++ K
Sbjct: 770 SKAGNYLSKVDGKTISLEASTASLMLSLFSRKGK 803
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 74 LFEILLDSLCKQGRVKAASEYFH------KRKE----------------LDQSWA----- 106
F +++SLCK+GRV A + F +R + +++++
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569
Query: 107 ------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
P V Y+ LL+G+ R+ + D + EM + V P +TYG ++ G R
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A ++ EM + G + ++ GL +E + ++ + ++
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ K E A+++ + + G +P+ +TY K G VE+A N++ M +SG
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
P + ++++L ++ ++ A ++ + ++ T+++++ L R K+ E
Sbjct: 750 APSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYRE 806
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 169/349 (48%), Gaps = 23/349 (6%)
Query: 49 VEAAIWTFEFA-NNLDMVKNFDSGASL---------------FEILLDSLCKQGRVKAAS 92
V ++TF L MV DS SL ++ L+ +LC+ RV A
Sbjct: 201 VSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEAL 260
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+ P V+ +N +++G R+ + +A + M + + +TYG L+
Sbjct: 261 QLLEDM--FLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMH 318
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM-ERFLVCEPG 211
G CR+ +VD A L+ ++ PN ++YNT+I G V +GRFEE ++ ++
Sbjct: 319 GLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYE 374
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P T+ ++ G K G L A ++L M+++ F P+ TY F K G++E+A +
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEI 434
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M G + + + Y+ L+ LCK+ ++ A+Q+ EM +GC D+ T LI+ LC+
Sbjct: 435 VNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK 494
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+K +EA + + DM G++ + +T+ L F R A KL + M
Sbjct: 495 NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 174/369 (47%), Gaps = 12/369 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDK--IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I + F+ A LL + I G+E PD TF I+I + G + +A+ E
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYE-PDAY---TFNIMIDGLVKKGYLVSAL---EL 399
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
N + + K F+ + IL++ CKQGR++ A+E + + + YN L+
Sbjct: 400 LNEM-VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSA--KGLSLNTVGYNCLICA 456
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ N+++A + + EM + P++ T+ +L+ G C+ +++ A+ L +M EG+ N
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIAN 516
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT++ + ++ +++ L +TY L+K CK G +E + +
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ +G P+ + N + GKV DA+ + MI G TPD +TY+ L+ LCK
Sbjct: 577 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 636
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A + +++ G D T LI C F++A + G +P+ +T+
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWS 696
Query: 359 RLNDEFKKR 367
L + K+
Sbjct: 697 ILINYIVKK 705
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 171/352 (48%), Gaps = 11/352 (3%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
LL+KI P+ V +T LI Y +G E A + N ++ ++ A F I
Sbjct: 332 LLNKIPN---PNTVLYNT---LISGYVASGRFEEAK---DLLYNNMVIAGYEPDAYTFNI 382
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++D L K+G + +A E ++ + + + P V Y IL+NG+ + +++A M
Sbjct: 383 MIDGLVKKGYLVSALELLNEM--VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSA 440
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ ++ N V Y L+ C+ ++ A++L EM +G +P+ +N++I+GL + + EE
Sbjct: 441 KGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEE 500
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + VTY +LV + ++ A K++ M+ RG TYN +
Sbjct: 501 ALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIK 560
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G VE + L+ +M+ G P ++ +IL+ LC+ K++ A++ ++M RG
Sbjct: 561 ALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTP 620
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+ T LI+ LC+M EAS F + G+ P +T+ L GM
Sbjct: 621 DIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGM 672
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 165/380 (43%), Gaps = 38/380 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD--MVKNFDSGASLFEILLDSLCKQGRVK--- 89
TF +I RAG + A A LD +++ F + A + L+ LC+ G+V
Sbjct: 277 TFNDVIHGLCRAGRIHEA------AKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEAR 330
Query: 90 ---------------------AASEYFHKRKEL------DQSWAPTVRVYNILLNGWFRS 122
AS F + K+L + P +NI+++G +
Sbjct: 331 ALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKK 390
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ A EM + PNV+TY L+ G+C+ R++ A +V M +G+ N + Y
Sbjct: 391 GYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGY 450
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I L + G EE + P + T+ SL+ G CK +E A + M
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G + + TYN F ++ A L +M+ G D +TY+ L+K LCK ++
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ + +EM +G + + +LI LCR K ++A +DMI RGL P +T+ L +
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K G A L N + S
Sbjct: 631 GLCKMGHVQEASNLFNKLQS 650
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 164/370 (44%), Gaps = 16/370 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L E DSA LL D VP+ V T LI V A+ E
Sbjct: 211 VMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQT---LIHALCENNRVSEALQLLE--- 264
Query: 61 NLDM-VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM + + F ++ LC+ GR+ A++ + L + ++ Y L++G
Sbjct: 265 --DMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRM--LLRGFSTDALTYGYLMHGL 320
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPN 178
R V +A ++ PN V Y TL+ GY R + A L+ M G EP+
Sbjct: 321 CRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPD 376
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A +N +IDGLV+ G ++ + P ++TYT L+ G+CK G LE A++I+
Sbjct: 377 AYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVN 436
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M ++G + YN K G +E+A+ L+ +M G PD T++ L+ LCK
Sbjct: 437 SMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNH 496
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K++ A+ + +M G + T L+H +A ++M+ RG +T+
Sbjct: 497 KMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYN 556
Query: 359 RLNDEFKKRG 368
L K G
Sbjct: 557 GLIKALCKTG 566
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 169/343 (49%), Gaps = 9/343 (2%)
Query: 26 EVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
E + +++ +LI Y ++G +E A+ + + A+ ++ +L SLC +
Sbjct: 132 ESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS-------VAPNAATYDAVLCSLCDR 184
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G++K A + + +L P V +L++ + V A + + EMR + P+VV
Sbjct: 185 GKLKQAMQVLDR--QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVV 242
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L++G+C+ R+D AI +K++ G + + I +N ++ L GR+ + ++
Sbjct: 243 TYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM 302
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L P++VT+ L+ C+ G L A +L+MM G P+ ++N + F +
Sbjct: 303 LRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGI 362
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ A+ M+ G PD +TY+ILL LCK+ K+D A+ + ++ +GC L + +
Sbjct: 363 DRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTV 422
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
I L ++ K + A E+M +GL P +T + + G
Sbjct: 423 IDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREG 465
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 165/352 (46%), Gaps = 14/352 (3%)
Query: 26 EVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
++PD V+ LIR + + G + A V + +S + +L+++ CK
Sbjct: 100 KIPDVVA---CTALIREFCKIGRTKNATRIMGILEESGAVIDANS----YNVLINAYCKS 152
Query: 86 GRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
G ++ A + LD S AP Y+ +L +K A + + P+V
Sbjct: 153 GEIEEA------LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDV 206
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
VT L++ C+ V +A++L EMR +G +P+ + YN +I G + GR +E +++
Sbjct: 207 VTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKK 266
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
++++ +++ C G A K+L M+ +G PS T+N + + G
Sbjct: 267 LPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGL 326
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+ A+N+ M + G+TP+ +++ L++ C +D AI+ + M RGC D+ T +
Sbjct: 327 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNI 386
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
L+ LC+ K D+A + +G P +++ + D K G LA +L
Sbjct: 387 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 17/339 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFE----FANNLDMVKNFDSGASLFEILLDSLC 83
PD V T+ +LI+ + + G ++ AI + + D++ + ++L SLC
Sbjct: 239 PDVV---TYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISH--------NMILRSLC 287
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
GR A + L + P+V +NIL+N + + A M K TPN
Sbjct: 288 SGGRWMDAMKLLATM--LRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 345
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
++ L++G+C + +DRAI ++ M G P+ + YN ++ L + G+ ++ ++
Sbjct: 346 SRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 405
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P++++Y +++ G K G E A ++L+ M +G P T S+ G
Sbjct: 406 QLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREG 465
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
KV +A+ + + G P+ Y+ ++ LCK + LAI +M GC + T
Sbjct: 466 KVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYT 525
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
LI + +EAS ++ RGLV L K D
Sbjct: 526 TLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKVSQD 564
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 6/274 (2%)
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R+ +++ RF M + P+VV L+ +C++ R A R++ + + G +A
Sbjct: 80 IRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDA 139
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN +I+ ++G EE +++ V P TY +++ C G L+ A ++L
Sbjct: 140 NSYNVLINAYCKSGEIEEALRVLDHTSV---APNAATYDAVLCSLCDRGKLKQAMQVLDR 196
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ P T K V AM L+ +M G PD +TY++L+K CKE +
Sbjct: 197 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD AI K++ GC D+ + M++ LC ++ +A M+R+G P +TF
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNI 316
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSR 393
L + ++G+ K NV+ +P+ +SR
Sbjct: 317 LINFLCQKGLLG---KALNVLEMMPKHGHTPNSR 347
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 186/394 (47%), Gaps = 25/394 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L A +++ A+ ++ + IG +PD T+ ++ A +E A FE
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPD---TSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+V + + + I++DS CK G ++ A ++F++ +E+ P V Y L++ + ++
Sbjct: 513 GLVADVYT----YTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKA 566
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M E PN+VTY L++G+C+ +V++A ++ + M
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
PN + Y ++DG ++ R EE +++ + P + Y +L+ G CK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A ++ M GF + TY+ + K + + A + KM+E+ P+ +
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LCK K D A ++ + M+ +GC ++ T T +I + K + E M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G+ P+Y+T++ L D K G +A L M
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 184/411 (44%), Gaps = 60/411 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF-- 58
+I KAK+ A L + +P+ V T+ LI + +AG VE A FE
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIV---TYSALIDGHCKAGQVEKACQIFERMC 615
Query: 59 ----ANNLDM-VKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELD----QS 104
++DM K +D + + LLD CK RV+ A RK LD +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA------RKLLDAMSMEG 669
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P VY+ L++G + + +A+ EM + + TY +L++ Y +++R D A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+++ +M + PN ++Y +IDGL + G+ +E +M+ P +VTYT+++ G+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------- 271
G +E ++L+ M S+G P+ TY + K G ++ A NL
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 272 --YRKMIES------------------GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YRK+IE P Y +L+ L K +L++A+++ +E+
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 312 CRGCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +ST LI LC K + A F +M ++G++P +F L
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 182/434 (41%), Gaps = 58/434 (13%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDF---VSKDTFVILIRRYARAGMVEAAIWTFEF 58
+ VL + + ++ + L+++G + DF S+ T+ LI+ + +A +++A
Sbjct: 203 LNVLVRKHCRNGSFSIALEELG--RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + N SLCK G+ + A +++ P Y L++G
Sbjct: 261 MS----LANLRMDGFTLRCFAYSLCKVGKWREALTLVET-----ENFVPDTVFYTKLISG 311
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++A F MR + PNVVTY TL+ G +++ R R++ M EG P+
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV----------------- 221
++N+++ +G ++++ + C P V Y L+
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 222 --KGY----------------------CKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
K Y C AG E A +++ MI +GF+P +TY+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
Y K+E A L+ +M G D TY I++ CK ++ A + EM+ GC
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T T LIH + K A+ FE M+ G +P+ +T+ L D K G +K C
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV---EKAC 608
Query: 378 NVMSSVPRSMELLD 391
+ + S ++ D
Sbjct: 609 QIFERMCGSKDVPD 622
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 37/300 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D LCK G++ A E K + + + T+ Y+ L++ +F+ K A +
Sbjct: 676 VYDALIDGLCKVGKLDEAQEV--KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + PNVV Y +++G C++ + D A +L++ M ++G +PN + Y +IDG G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E ++ER P VTY L+ CK G L+ A +L+ M + Y
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 254 YFFRYFSK-----------FGKVEDA--MNLYRKMIESGYTPDRL--------------- 285
F+K G+ + A +++YR +I++ RL
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 286 -------TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
TY+ L++ LC +K++ A Q+ EM +G ++ + LI L R K EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D LCK G+ A + +E + P V Y +++G+ ++
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR-------------------KEG 174
M + V PN VTY L++ C+ +D A L++EM+ KE
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 863
Query: 175 IE--------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV----T 216
IE P VY +ID L++A R E ++E V T+V T
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSST 921
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
Y SL++ C A +E A ++ M +G +P ++ + + K+ +A+ L
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 3/256 (1%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ T VYN L++ R + K E F ++R ++ LV +CR A+
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 220
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ ++ P+ YN +I ++A R + S + + T
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 280
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G A L ++ + F+P Y + E+AM+ +M + P+
Sbjct: 281 CKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY LL + +L +V M GC L+H C A +
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397
Query: 345 MIRRGLVPHYLTFKRL 360
M++ G +P Y+ + L
Sbjct: 398 MVKCGHMPGYVVYNIL 413
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 153/320 (47%), Gaps = 5/320 (1%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+++ G + LL+ L K GR Y L P Y LL +++ +
Sbjct: 12 HYNHGTLSYNYLLEVLAKSGRCDHV--YGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A + M + +PNV +Y L+ G CR ++VD A L+ EM G +PN + Y +++
Sbjct: 70 EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
GL + G+ +E + R + P V Y L+ G+ K GD+ A ++ + M+ +G +
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ TYN FS+ G+ +L++ M+ G P+ T++ LL CK + A ++
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM+ GC D+ + LI +C K EA +MIR G+ P +++ L D + K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309
Query: 367 RGMTALAQKLCNVMSSVPRS 386
G A KL +P+S
Sbjct: 310 SGALDHAIKL---FYEIPKS 326
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 163/352 (46%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++VLAK+ D + D + VP+ T+ L+R +A E A F
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTY---TYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N S + IL+ LC+ +V A+E ++ +D P V Y LL+G
Sbjct: 80 AQGCSPNVFS----YSILIAGLCRGQKVDEAAELLNEM--IDGGHQPNVVTYGSLLSGLC 133
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +K+A + M P+ V Y L++G+ + + A RL +EM ++G P
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN+++ G G F V + + L P + T+ +L+ G+CK GD+ A ++ M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S G P +YN R GK +A L R+MI SG PD ++Y+IL+ K L
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D AI++ E+ G + D + + +I LCR K A F+DMI G P
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 168/352 (47%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + ++ D A LL + I G P+ V T+ L+ + G ++ A+ F
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVV---TYGSLLSGLCKMGKLKEAVDLFSRM- 148
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + ++ +L+D K+G + A F + L++ PTV YN LL+G+
Sbjct: 149 ---VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM--LEKGCIPTVFTYNSLLSGFS 203
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + + +M ++ PN+ T+ L++G+C++ + A RL EMR G P+ +
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+I G+ G+ E ++ + GP +V+Y L+ GY K+G L+ A K+ +
Sbjct: 264 SYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P +Y+ + GKV A +++ MI +G PD L+ LC+ ++L
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ ++ + M C + +L++ LC+ + D+ F ++ RG P
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LLD CK G + A F + + L P V YN L+ G +A+R E
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSL--GCPPDVVSYNTLIRGMCSKGKPHEAQRLLRE 287
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P++V+Y L++GY + +D AI+L E+ K G+EP+A Y+T+ID L AG+
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + P LV G C+ L + ++ + M+ +P YN
Sbjct: 348 VGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNL 407
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
K + +D ++ ++ E G++PD ++L+ L + D D A
Sbjct: 408 LMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 175/366 (47%), Gaps = 17/366 (4%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
++I R G +E A FE +L + N A ++ L+ ++GR + A
Sbjct: 451 MIINGLCRHGSIEDASRVFEIMVSLGVKPN----AVIYTTLIKGHVQEGRFQEAVRIL-- 504
Query: 98 RKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
K +D+ P V YN ++ G +S+ +++A+ + +EM + + PNV TYG L+ GYC+
Sbjct: 505 -KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
+ A R KEM GI PN +V +IDG + G E + + L P + T
Sbjct: 564 SGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y++L+ G + G L+GA ++L + +G +P TYN F K G + A L+ M
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+ G +P+ +TY+ L+ LCK +++ A ++ + +G + T +I C+
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSM-------EL 389
+A F++M +G+ P + L D +K G T A L + SV + L
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL--FLESVQKGFASTSSLNAL 801
Query: 390 LDSRCK 395
+D CK
Sbjct: 802 MDGFCK 807
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 161/346 (46%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F +LI Y + G+ + A+ F A F G LL L K +++ +
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKR----NGFVVGLLCCNGLLSDLLKANKLELFWRF 223
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++ L+ + V Y L+N FR+ N K+ +R EM ++ +P++VTY ++ G
Sbjct: 224 YNGM--LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGL 281
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR VD A L K M K+G+ + Y+ +IDG + R E M+E P
Sbjct: 282 CRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGH 341
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V YT+L+ G+ + GD A ++ + M++RG + TYN + KFG +E A L +
Sbjct: 342 VAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNE 401
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G PD TY+ +++ KE + EMK T M+I+ LCR
Sbjct: 402 MIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS 461
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++AS FE M+ G+ P+ + + L + G A ++ VM
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM 507
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 156/322 (48%), Gaps = 45/322 (13%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+ PT +++NG R +++DA R + M V PN V Y TL++G+ + R A
Sbjct: 441 NLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEA 500
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTS 219
+R++K M K+G++P+ + YN+VI GL ++ + EE M+ER L P + TY +
Sbjct: 501 VRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL----KPNVYTYGA 556
Query: 220 LVKGYCKAGDL-------------------------------EG----ASKILKMMISRG 244
L+ GYCK+G++ EG A+ I + M+ R
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TY+ + GK++ AM L + +E G PD TY+ ++ CK+ + A
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
Q+ + M +G ++ T LI+ LC+ + + A F+ + +GL + +T+ + D +
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Query: 365 KKRGMTALAQKLCNVMS--SVP 384
K G + A +L + M+ VP
Sbjct: 737 CKSGNLSKAFRLFDEMTLKGVP 758
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I RAG V+ A FE +D K + + IL+D KQ R A
Sbjct: 273 TYNVVIGGLCRAGEVDEA---FELKKLMDK-KGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P Y L++G+ R + +A R EM V N+ TY LV+G
Sbjct: 329 LEEM--FSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGV 386
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +++A L+ EM GI+P+ YN +I+G ++ V ++ PT
Sbjct: 387 CKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTA 446
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T ++ G C+ G +E AS++ ++M+S G P+ Y + + G+ ++A+ + +
Sbjct: 447 YTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKV 506
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G PD L Y+ ++ LCK K++ A EM RG ++ T LIH C+ +
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F++M+ G+ P+ + L D + K G T A + M
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 169/400 (42%), Gaps = 55/400 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTF-EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA-- 91
T+ LI R G ++ A+ EF + K + ++ CKQG + A
Sbjct: 623 TYSALIHGLLRNGKLQGAMELLSEF-----LEKGLVPDVFTYNSIISGFCKQGGIGKAFQ 677
Query: 92 -SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
EY ++ +P + YN L+NG ++ ++ A + + + + N VTY T+
Sbjct: 678 LHEYMCQK-----GISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE------------- 197
++GYC+ + +A RL EM +G+ P++ VY+ +IDG + G E+
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792
Query: 198 -----VSGMMERFLVCEPG------------------PTMVTYTSLVKGYCKAGDLEGAS 234
++ +M+ F C+ G P VTYT L+ +CK G L+ A
Sbjct: 793 ASTSSLNALMDGF--CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAE 850
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ M R +P+ TY ++ G+ + L+ +MI PD +T+ +++
Sbjct: 851 QFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAH 910
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
KE +++ +M +G ++ + +LI LCR E E + +GL
Sbjct: 911 LKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSL 970
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSMELLD 391
T L F K G A ++ M VP S EL D
Sbjct: 971 ATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELND 1010
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 31 VSKDTFV--ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
V D+FV LI + G E A+ F L+ V+ + S L+D CK G+V
Sbjct: 757 VPPDSFVYSALIDGCRKEGNTEKALSLF-----LESVQKGFASTSSLNALMDGFCKSGKV 811
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A++ +D+ P Y IL++ ++ +K+AE+F+++M+K N+ PN +TY
Sbjct: 812 IEANQLLEDM--VDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYT 869
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ GY R L EM + IEP+ + ++ +ID ++ G + +++ L
Sbjct: 870 ALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKK 929
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+ L+ C+ + K+L+ + +G S T + R F K GK++ A
Sbjct: 930 GGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGA 989
Query: 269 MNLYRKMIESGYTPDRLTYHILLKI----LCKEDKLDLAIQVSKEMKCR 313
+ + M+ + PD + L+ + E+ D Q++ E+ C+
Sbjct: 990 ARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWEVACQ 1038
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 43/275 (15%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SG 200
V + L++GY + D A+ ++ G + N ++ L++A + E +G
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
M+E ++ + + TYT L+ + +AG+ + ++L M +G PS TYN
Sbjct: 227 MLEANVLHD----VYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLC 282
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL-----CKEDKLDL------------- 302
+ G+V++A L + M + G D TY IL+ C E KL L
Sbjct: 283 RAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342
Query: 303 -----------------AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
A +V +EM RG ++L T L+ +C+ ++A A +M
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I G+ P T+ + + + K T+ + L + M
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 179/378 (47%), Gaps = 14/378 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L K K+FD C L+ ++ HE+ VS T ++RR A AI F +
Sbjct: 203 MVDILGKFKQFD-LMCGLIGQM--HEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKMD 259
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K+ + +LLD+LCK+ VK A F + L + P +N L++GW
Sbjct: 260 RFGVAKDTKA----MNVLLDTLCKERSVKRARGAF---QALKGTIPPDESSFNTLVHGWC 312
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ +K+A EM + +P+V TY L+E YC + ++ EM +G PN I
Sbjct: 313 KARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNII 372
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT--YTSLVKGYCKAGDLEGASKILK 238
Y V+ L +AGR +E ++ V + G + Y L+ C+AG L+ A+ +++
Sbjct: 373 TYTIVMHALGKAGRTQEALDTFDK--VKQDGCALDASFYNCLIYILCRAGRLQDANFVVE 430
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M G P+ TT+N E+A+ L +M E PD TY LLK+ C+
Sbjct: 431 EMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRK 490
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ + + M + D T T+L+ LCR + ++ E+M+ +G P TF
Sbjct: 491 WVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFD 550
Query: 359 RLNDEFKKRGMTALAQKL 376
+ ++ K M + +K+
Sbjct: 551 LVLEKLKNMHMLSAVRKI 568
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 1/202 (0%)
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+EG A Y+ ++D L + +F+ + G++ + ++ T T +++ C A
Sbjct: 190 QEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWS 249
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A M G N K V+ A ++ + + PD +++ L+
Sbjct: 250 DAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQAL-KGTIPPDESSFNTLV 308
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CK L A + KEM+ G + T T LI C F ++M +G
Sbjct: 309 HGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCT 368
Query: 352 PHYLTFKRLNDEFKKRGMTALA 373
P+ +T+ + K G T A
Sbjct: 369 PNIITYTIVMHALGKAGRTQEA 390
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 147/300 (49%), Gaps = 2/300 (0%)
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
+LC G + A F K ++ P V Y L++G S +K A + M ++ V
Sbjct: 329 ALCDMGCYEDAWRLFVDMK--NKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV 386
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
PN VTY L+ RR+ A ++ M + G PN + YN +I G G ++
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+M L +VTY +++KGYC +G+ A +IL +M G P +Y F
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K K+E A L+ +M++ G P+ +TY L+ CK++KLD A + + MK GC ++
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T +LIH L + F A + MI G+ P+ +T+ + D K G T+LA ++ N M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 9/358 (2%)
Query: 11 FDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS 70
++ AW L +D P+ T+ LI +G+++ AI F + + N +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVY---TYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+L IL+++ R+K A + +P + YN ++ G+ + K A
Sbjct: 393 YNALINILVENR----RIKYAFVVLNLMGR--NGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
M + + N+VTY T+++GYC A+R++ MR G +P+ Y +I G
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ + E G+ + P VTYT+L+ GYCK L+ A+ +L+ M G P+
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN +K A L + MIE G P+ +TY ++ LCK LA+++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+GC +L T + LI L + K +EA F ++ R GL+P +T+ ++ + + G
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 160/333 (48%), Gaps = 7/333 (2%)
Query: 50 EAAIWTFEFANNLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAP 107
EA T F LDM+ LF LL L + G A + +H+ L + P
Sbjct: 159 EAMARTMSF---LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM--LSEGVQP 213
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ +YN ++N + NV DAE ++ + ++P+ TY +++ G+CR +D A+++
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+M KEG EPN + Y+T+I+GL ++GR E ++ ++ PT T T + C
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G E A ++ M ++G P+ TY G ++ A+ L+ +M G P+ +TY
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTY 393
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ L+ IL + ++ A V M GC ++ T +I C + +A +M++
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG + +T+ + + G T A ++ ++M
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 1/284 (0%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + + + YN ++ G+ S N A R MR P+ +Y L+ G+C++ ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A L EM +G+ PN + Y +IDG + + + + ++E P + TY L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G K + GA ++ K+MI G P+ TY K G A+ ++ KMIE G
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ LTY L++ L +E K++ A + E++ G D T +I K + A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
MI+ G P T+ L K + A Q+L + VP
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA-DQRLAALPDVVP 734
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 61/367 (16%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK ++ A+ K P V+ YN+L++G + N AE
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKR--SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +E + PNVVTY +++G C+ A+ + +M ++G PN + Y+++I L + G+
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 195 FEE----------------------------VSGMME-------RFLVCEPGPTMVTYTS 219
EE +SG +E R + PT+ TY
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 220 LVKGY--------------------CKAG----DLEGASKILKMMISRGFLPSPTTYNYF 255
L+KG C G D + S + + S N
Sbjct: 711 LIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNAL 770
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
S G+ +A L MI G PD+ Y+ LL L + +DLA+ V K M +GC
Sbjct: 771 VSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGC 830
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ L+ LI LC++++ EA FE+M+ R P + L D + G L +
Sbjct: 831 EVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 890
Query: 376 LCNVMSS 382
++M +
Sbjct: 891 FLHIMET 897
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y L+ RL + M EG++PN ++YN VI+ L + G + +M++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E P TYTS++ G+C+ DL+
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLD---------------------------------- 267
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A+ ++ +M + G P+ +TY L+ LC +++ A + +EM G T T
Sbjct: 268 -SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
I LC M +++A F DM +G P+ T+ L G+ +A L + MS
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 152/299 (50%), Gaps = 9/299 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW--APTVRVYNILLNGWFR---SKNVKDAE 129
F ++ LC+ G+++ A + K +W AP+V YN L++G+ + + N+ +
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIK----AWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + ++P VT+G L+ GYC+ A+R+ +EM+++GI + + YN++I GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ EE +ME P +T+ ++KG+CK G + A+ + M R P
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
YN + + GK+EDAM + M + G +P+ TY+ L+ + A + E
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
MK +G + D+ T +LI LC + +A ++M GL P++LT+ + F +G
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 4/300 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A F +L++ CK AA F + K+ Q A +V YN L++G V++ +
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQ--QGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM ++PN +T+G +++G+C+ + A + M + +EP+ ++YN +ID
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E+ + E P + TY L+ G+ ++GD AS +L M +G T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM- 310
YN G+V A+ L +M E G P+ LTY+ +++ C + + A ++ M
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
KCR ++ T + I C++ K DEA+ +M+ + LVP+ +T++ + + ++G T
Sbjct: 502 KCRK-RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++L+ +L + + A + F E P+ N LL G +K V AE+ +
Sbjct: 121 IADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFR 180
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE-- 191
+ V+P++ T+ T++ G CR+ ++ +A + K+++ G+ P+ YN++IDG +
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240
Query: 192 -AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AG V +++ + PT VT+ L+ GYCK + A ++ + M +G S
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN GKVE+ + L +M + G +P+ +T+ +LK CK+ + A M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
R + D+ +LI + R+ K ++A A E M ++G+ P+ T+ L F + G
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 145/317 (45%), Gaps = 11/317 (3%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S LL L RV A + F R L + +P + +N +++G R ++ A
Sbjct: 157 SSVNALLAGLVGAKRVDLAEKAF--RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 133 LEMRKENVTPNVVTYGTLVEGYCR------LRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+++ + P+V TY +L++GYC+ + VD L+KEM + GI P A+ + +I
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLI 271
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G + + E ++VTY SL+ G C G +E K+++ M G
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ T+ + F K G + DA + M E PD + Y+IL+ + + K++ A+ V
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ M +G ++ T LI R + AS ++M +G+ +T+ L
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451
Query: 367 RGMTALAQKLCNVMSSV 383
+G A KL + MS V
Sbjct: 452 KGEVRKAVKLLDEMSEV 468
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 8/280 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI Y + AA+ FE + + + L+ LC +G+V+ +
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQ----QGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ ++L S P + +L G+ + + DA + M + NV P+VV Y L++ Y
Sbjct: 322 MEEMEDLGLS--PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY 379
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RL +++ A+ + + M K+GI PN YN +I G +G + SG+++ +
Sbjct: 380 RRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADV 439
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ C G++ A K+L M G P+ TYN + F G ++ A + +
Sbjct: 440 VTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM--KC 312
M + + +TY++ +K C+ K+D A + EM KC
Sbjct: 500 MEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI G VE + E +L + N + F +L CK+G + A+++
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT----FGCVLKGFCKKGMMADANDW 356
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
E ++ P V +YNIL++ + R ++DA M K+ ++PNV TY L+ G+
Sbjct: 357 IDGMTE--RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R A L+ EM+++GIE + + YN +I L G + +++ P
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY ++++G+C G+++ A +I M + TYN F +YF + GK+++A +L +
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNE 534
Query: 275 MI-------------------ESGYTPD 283
M+ E GYTPD
Sbjct: 535 MLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI ++R+G +A + K ++ + +L+ +LC +G V+ A +
Sbjct: 406 TYNCLITGFSRSGDWRSASGLLDEMKE----KGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ E+ P YN ++ G+ N+K A M K NVVTY ++ +
Sbjct: 462 LDEMSEV--GLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
C++ ++D A L+ EM + + PN I Y T+ +G++E G ++ G
Sbjct: 520 CQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 147/300 (49%), Gaps = 2/300 (0%)
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
+LC G + A F K ++ P V Y L++G S +K A + M ++ V
Sbjct: 329 ALCDMGCYEDAWRLFVDMK--NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
PN VTY L+ RR+ A ++ M + G PN + YN +I G G ++
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+M L +VTY +++KGYC +G+ A +IL +M G P +Y F
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K K+E A L+ +M++ G P+ +TY L+ CK++KLD A + + MK GC ++
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T +LIH L + F A + MI G+ P+ +T+ + D K G T+LA ++ N M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 9/358 (2%)
Query: 11 FDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS 70
++ AW L +D P+ T+ LI +G+++ AI F + + N +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVY---TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+L IL+++ R+K A + +P + YN ++ G+ + K A
Sbjct: 393 YNALINILVENR----RIKYAFVVLNLMGR--NGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
M + + N+VTY T+++GYC A+R++ MR G +P+ Y +I G
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ + E G+ + P VTYT+L+ GYCK L+ A+ +L+ M G P+
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN +K A L + MIE G P+ +TY ++ LCK LA+++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+GC +L T + LI L + K +EA F ++ R GL+P +T+ ++ + + G
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 160/333 (48%), Gaps = 7/333 (2%)
Query: 50 EAAIWTFEFANNLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAP 107
EA T F LDM+ LF LL L + G A + +H+ L + P
Sbjct: 159 EAMARTMSF---LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM--LSEGVQP 213
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ +YN ++N + NV DAE ++ + ++P+ TY +++ G+CR +D A+++
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+M KEG EPN + Y+T+I+GL ++GR E ++ ++ PT T T + C
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G E A ++ M ++G P+ TY G ++ A+ L+ +M G P+ +TY
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ L+ IL + ++ A V M GC ++ T +I C + +A +M++
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG + +T+ + + G T A ++ ++M
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 1/284 (0%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + + + YN ++ G+ S N A R MR P+ +Y L+ G+C++ ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A L EM +G+ PN + Y +IDG + + + + ++E P + TY L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G K + GA ++ K+MI G P+ TY K G A+ ++ KMIE G
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ LTY L++ L +E K++ A + E++ G D T +I K + A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
MI+ G P T+ L K + A Q+L + VP
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA-DQRLAALPDVVP 734
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 61/367 (16%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK ++ A+ K P V+ YN+L++G + N AE
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKR--SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +E + PNVVTY +++G C+ A+ + +M ++G PN + Y+++I L + G+
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 195 FEE----------------------------VSGMME-------RFLVCEPGPTMVTYTS 219
EE +SG +E R + PT+ TY
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 220 LVKGY--------------------CKAG----DLEGASKILKMMISRGFLPSPTTYNYF 255
L+KG C G D + S + + S N
Sbjct: 711 LIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNAL 770
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
S G+ +A L MI G PD+ Y+ LL L + +DLA+ V K M +GC
Sbjct: 771 VSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGC 830
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ L+ LI LC++++ EA FE+M+ R P + L D + G L +
Sbjct: 831 EVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 890
Query: 376 LCNVMSS 382
++M +
Sbjct: 891 FLHIMET 897
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y L+ RL + M EG++PN ++YN VI+ L + G + +M++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E P TYTS++ G+C+ DL+
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLD---------------------------------- 267
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A+ ++ +M + G P+ +TY L+ LC +++ A + +EM G T T
Sbjct: 268 -SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
I LC M +++A F DM +G P+ T+ L G+ +A L + MS
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 147/300 (49%), Gaps = 2/300 (0%)
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
+LC G + A F K ++ P V Y L++G S +K A + M ++ V
Sbjct: 329 ALCDMGCYEDAWRLFVDMK--NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
PN VTY L+ RR+ A ++ M + G PN + YN +I G G ++
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+M L +VTY +++KGYC +G+ A +IL +M G P +Y F
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K K+E A L+ +M++ G P+ +TY L+ CK++KLD A + + MK GC ++
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T +LIH L + F A + MI G+ P+ +T+ + D K G T+LA ++ N M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 9/358 (2%)
Query: 11 FDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS 70
++ AW L +D P+ T+ LI +G+++ AI F + + N +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVY---TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+L IL+++ R+K A + +P + YN ++ G+ + K A
Sbjct: 393 YNALINILVENR----RIKYAFVVLNLMGR--NGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
M + + N+VTY T+++GYC A+R++ MR G +P+ Y +I G
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ + E G+ + P VTYT+L+ GYCK L+ A+ +L+ M G P+
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN +K A L + MIE G P+ +TY ++ LCK LA+++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+GC +L T + LI L + K +EA F ++ R GL+P +T+ ++ + + G
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 160/333 (48%), Gaps = 7/333 (2%)
Query: 50 EAAIWTFEFANNLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAP 107
EA T F LDM+ LF LL L + G A + +H+ L + P
Sbjct: 159 EAMARTMSF---LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM--LSEGVQP 213
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ +YN ++N + NV DAE ++ + ++P+ TY +++ G+CR +D A+++
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+M KEG EPN + Y+T+I+GL ++GR E ++ ++ PT T T + C
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G E A ++ M ++G P+ TY G ++ A+ L+ +M G P+ +TY
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ L+ IL + ++ A V M GC ++ T +I C + +A +M++
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG + +T+ + + G T A ++ ++M
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 1/284 (0%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + + + YN ++ G+ S N A R MR P+ +Y L+ G+C++ ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A L EM +G+ PN + Y +IDG + + + + ++E P + TY L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G K + GA ++ K+MI G P+ TY K G A+ ++ KMIE G
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ LTY L++ L +E K++ A + E++ G D T +I K + A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
MI+ G P T+ L K + A Q+L + VP
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA-DQRLAALPDVVP 734
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 61/367 (16%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK ++ A+ K P V+ YN+L++G + N AE
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKR--SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +E + PNVVTY +++G C+ A+ + +M ++G PN + Y+++I L + G+
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650
Query: 195 FEE----------------------------VSGMME-------RFLVCEPGPTMVTYTS 219
EE +SG +E R + PT+ TY
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710
Query: 220 LVKGY--------------------CKAG----DLEGASKILKMMISRGFLPSPTTYNYF 255
L+KG C G D + S + + S N
Sbjct: 711 LIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNAL 770
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
S G+ +A L MI G PD+ Y+ LL L + +DLA+ V K M +GC
Sbjct: 771 VSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGC 830
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ L+ LI LC++++ EA FE+M+ R P + L D + G L +
Sbjct: 831 EVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 890
Query: 376 LCNVMSS 382
++M +
Sbjct: 891 FLHIMET 897
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y L+ RL + M EG++PN ++YN VI+ L + G + +M++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E P TYTS++ G+C+ DL+
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLD---------------------------------- 267
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A+ ++ +M + G P+ +TY L+ LC +++ A + +EM G T T
Sbjct: 268 -SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
I LC M +++A F DM +G P+ T+ L G+ +A L + MS
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 153/325 (47%), Gaps = 37/325 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ LCK+GRV+ A D P Y L+ G R+ N+ A +
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDA--YPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN----------- 183
M K+ PN VTY TL+ G C R++ A+ +++EM ++GIEP Y
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 184 ------------------------TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+I GL G+FE G+ + L PT VTY +
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ C G E A I K M+S G LPS TYN + F G ++ AM ++ KM+++G
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+P+ +TY+ L+ CK+ L+ A+++ + MK G D T T LI R K + A+
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEF 364
+ F M+ G+ P+++T+ + D +
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGY 527
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 154/315 (48%), Gaps = 4/315 (1%)
Query: 68 FDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+D G +L F LL L K V A + + K L+ P++ +N ++N + V
Sbjct: 161 YDFGYTLCSFTTLLIQLGKFDMVDLARDMY--IKMLNSGIRPSLLTFNTMINILCKKGRV 218
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
++A+ + + + PN TY +L+ G+CR +D A + M K+G +PN++ Y+T+
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I+GL GR EE M+E + PT+ TYT + C AG A ++L M RG
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+P+ T+ S+ GK E A+ LY KM+ G P +TY+ L+ LC E + + A
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ K M G T +I C M +A F+ M++ G P+ +T+ L +
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 366 KRGMTALAQKLCNVM 380
K+G A +L +M
Sbjct: 459 KQGNLNNAMRLLEIM 473
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 21/332 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ TF LI +R G E AI + + + L++ LC +G
Sbjct: 339 VPNI---QTFTALISGLSRDGKFEIAIGLYHKM----LADGLVPTTVTYNALINQLCVEG 391
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R + A F + L P+ + YN ++ + +++ A + +M K +PNV+T
Sbjct: 392 RFETAFTIF--KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS----GMM 202
Y TL+ GYC+ ++ A+RL++ M+ G++P+A Y +I G G+ E + GMM
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E + P VTYT+++ GY ++ A + M+ G LPS TYN FSK
Sbjct: 510 EHGI----SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+ +A N KM++ G P+ +TY + LC+ + LA ++ EM+ R +L T
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+ LI+ LC+ + ++ AE +++ R + HY
Sbjct: 626 SSLIYGLCQEGRAED--AEMYNLLAR--LTHY 653
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 8/347 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI G +E A+ E +MV K + + I L SLC G A E
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLE-----EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K K+ + P ++ + L++G R + A + +M + + P VTY L+
Sbjct: 329 LLGKMKK--RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C R + A + K M G P+ YN +I G ++ + ++ L P
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++TY +L+ GYCK G+L A ++L++M G P TY FS+ GK+E A +L+
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M+E G +P+ +TY ++ K+D A+ + +M G T ++I +
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTN 566
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA M+++GL+P+ +T+ D + G T LA K+ + M
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ L + G+ + A +HK L PT YN L+N + A +
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKM--LADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+ TY +++ +C + + +A+ + +M K G PN I YNT+I G + G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E P TYT L+ G+ + G LE A+ + M+ G P+ TY
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ KV+DA+ L+ KM+ESG P TY++++ K + + A +M +G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ T T I LCR + A F +M +R P+ T+ L
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 144/328 (43%), Gaps = 43/328 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI ++R G +E A F M + ++D +V A
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGM----MEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K E P+ + YN++++G+ ++ ++ +AE F +M K+ + PNV+TY + ++G
Sbjct: 540 FWKMVESGN--LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE--EVSGMMERFLVCEPGP 212
CR R A ++ EM K PN Y+++I GL + GR E E+ ++ R P
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN-- 270
+ TYT+LVKG C G A +++ M +G PS Y K KVE A+N
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 271 ---------------------------------LYRKMIESGYTPDRLTYHILLKILCKE 297
+++ M+E + D + + +LL L KE
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKE 777
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ DL +++ M+ R C ++ T ML
Sbjct: 778 GETDLCLKLLHVMESRNCTLNFQTYVML 805
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 181/423 (42%), Gaps = 54/423 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L F++A+ + + +P S T+ +I+ + G ++ A+ F+
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLP---STQTYNEIIKCFCLMGDIQKAMVIFD--- 436
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
K +G+S + L+ CKQG + A K P Y L+
Sbjct: 437 -----KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK--GNGLKPDAWTYTELI 489
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ R ++ A + M + ++PN VTY +++GY L +VD A+ L +M + G
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P++ YN +I G + E + + P ++TYTS + G C+ G A KI
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA--MNLYRKMIESGYTPDRLTYHILLKIL 294
M R + P+ TY+ + G+ EDA NL ++ G P+ TY L+K L
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669
Query: 295 CKE------DKLDLA-----IQVSKEM-------KCRGCDID--------LDTSTMLIHL 328
C E D+L ++ +Q S+E+ +C+ ++ +DT +HL
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729
Query: 329 ---------LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
LC+ +EA F+ M+ + + + L D K G T L KL +V
Sbjct: 730 SDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHV 789
Query: 380 MSS 382
M S
Sbjct: 790 MES 792
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 7/234 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ ++ +F+ + R R G+ F+ + ++ +N+ + L+ LC++G
Sbjct: 584 LPNVITYTSFIDGLCRNGRTGLA------FKIFHEMEK-RNYFPNLYTYSSLIYGLCQEG 636
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R + A Y + P V Y L+ G +A++ + M+K+ + P+
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G C+ +V+ A+ + M G + + Y +I L + EE + + L
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
V +T L+ G K G+ + K+L +M SR + TY R S
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELS 810
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 153/325 (47%), Gaps = 37/325 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ LCK+GRV+ A D P Y L+ G R+ N+ A +
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDA--YPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN----------- 183
M K+ PN VTY TL+ G C R++ A+ +++EM ++GIEP Y
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 184 ------------------------TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+I GL G+FE G+ + L PT VTY +
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ C G E A I K M+S G LPS TYN + F G ++ AM ++ KM+++G
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+P+ +TY+ L+ CK+ L+ A+++ + MK G D T T LI R K + A+
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEF 364
+ F M+ G+ P+++T+ + D +
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGY 527
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 154/315 (48%), Gaps = 4/315 (1%)
Query: 68 FDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+D G +L F LL L K V A + + K L+ P++ +N ++N + V
Sbjct: 161 YDFGYTLCSFTTLLIQLGKFDMVDLARDMY--IKMLNSGIRPSLLTFNTMINILCKKGRV 218
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
++A+ + + + PN TY +L+ G+CR +D A + M K+G +PN++ Y+T+
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I+GL GR EE M+E + PT+ TYT + C AG A ++L M RG
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+P+ T+ S+ GK E A+ LY KM+ G P +TY+ L+ LC E + + A
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ K M G T +I C M +A F+ M++ G P+ +T+ L +
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 366 KRGMTALAQKLCNVM 380
K+G A +L +M
Sbjct: 459 KQGNLNNAMRLLEIM 473
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 21/332 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ TF LI +R G E AI + + + L++ LC +G
Sbjct: 339 VPNI---QTFTALISGLSRDGKFEIAIGLYHKM----LADGLVPTTVTYNALINQLCVEG 391
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R + A F + L P+ + YN ++ + +++ A + +M K +PNV+T
Sbjct: 392 RFETAFTIF--KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS----GMM 202
Y TL+ GYC+ ++ A+RL++ M+ G++P+A Y +I G G+ E + GMM
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E + P VTYT+++ GY ++ A + M+ G LPS TYN FSK
Sbjct: 510 EHGI----SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+ +A N KM++ G P+ +TY + LC+ + LA ++ EM+ R +L T
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+ LI+ LC+ + ++ AE +++ R + HY
Sbjct: 626 SSLIYGLCQEGRAED--AEMYNLLAR--LTHY 653
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 8/347 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI G +E A+ E +MV K + + I L SLC G A E
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLE-----EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K K+ + P ++ + L++G R + A + +M + + P VTY L+
Sbjct: 329 LLGKMKK--RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C R + A + K M G P+ YN +I G ++ + ++ L P
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++TY +L+ GYCK G+L A ++L++M G P TY FS+ GK+E A +L+
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M+E G +P+ +TY ++ K+D A+ + +M G T ++I +
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTN 566
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA M+++GL+P+ +T+ D + G T LA K+ + M
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ L + G+ + A +HK L PT YN L+N + A +
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKM--LADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+ TY +++ +C + + +A+ + +M K G PN I YNT+I G + G
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E P TYT L+ G+ + G LE A+ + M+ G P+ TY
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ KV+DA+ L+ KM+ESG P TY++++ K + + A +M +G
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ T T I LCR + A F +M +R P+ T+ L
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 144/328 (43%), Gaps = 43/328 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI ++R G +E A F M + ++D +V A
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGM----MEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K E P+ + YN++++G+ ++ ++ +AE F +M K+ + PNV+TY + ++G
Sbjct: 540 FWKMVESGN--LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE--EVSGMMERFLVCEPGP 212
CR R A ++ EM K PN Y+++I GL + GR E E+ ++ R P
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN-- 270
+ TYT+LVKG C G A +++ M +G PS Y K KVE A+N
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 271 ---------------------------------LYRKMIESGYTPDRLTYHILLKILCKE 297
+++ M+E + D + + +LL L KE
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKE 777
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ DL +++ M+ R C ++ T ML
Sbjct: 778 GETDLCLKLLHVMESRNCTLNFQTYVML 805
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 181/423 (42%), Gaps = 54/423 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L F++A+ + + +P S T+ +I+ + G ++ A+ F+
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLP---STQTYNEIIKCFCLMGDIQKAMVIFD--- 436
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
K +G+S + L+ CKQG + A K P Y L+
Sbjct: 437 -----KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK--GNGLKPDAWTYTELI 489
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ R ++ A + M + ++PN VTY +++GY L +VD A+ L +M + G
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P++ YN +I G + E + + P ++TYTS + G C+ G A KI
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA--MNLYRKMIESGYTPDRLTYHILLKIL 294
M R + P+ TY+ + G+ EDA NL ++ G P+ TY L+K L
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669
Query: 295 CKE------DKLDLA-----IQVSKEM-------KCRGCDID--------LDTSTMLIHL 328
C E D+L ++ +Q S+E+ +C+ ++ +DT +HL
Sbjct: 670 CGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729
Query: 329 ---------LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
LC+ +EA F+ M+ + + + L D K G T L KL +V
Sbjct: 730 SDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHV 789
Query: 380 MSS 382
M S
Sbjct: 790 MES 792
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 7/234 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ ++ +F+ + R R G+ F+ + ++ +N+ + L+ LC++G
Sbjct: 584 LPNVITYTSFIDGLCRNGRTGLA------FKIFHEMEK-RNYFPNLYTYSSLIYGLCQEG 636
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R + A Y + P V Y L+ G +A++ + M+K+ + P+
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G C+ +V+ A+ + M G + + Y +I L + EE + + L
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
V +T L+ G K G+ + K+L +M SR + TY R S
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELS 810
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 146/309 (47%), Gaps = 2/309 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ L K G+ A E F + + P Y ++NG + A + +
Sbjct: 48 FTTLINGLGKVGKFAQAVELFDDM--VARGCQPDDYTYTTIINGLCKIGETALAAGLFKK 105
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + NVVTY TL+ C+ RRV+ A+ + M+ + I P Y ++I GL R
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E S ++ P +VT+ LV +CK G + A +LK M G P TYN
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+S + +V +A L+ MI G PD +Y IL+ CK ++D A Q+ EM +G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + LIH LC++ + EA F++M G +P+ T+ L D F K+G A
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345
Query: 375 KLCNVMSSV 383
+L M S
Sbjct: 346 RLFRAMQST 354
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+D+ CK+G+V AA E+ P V YN L+ G+ V +A + +
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEM--GVEPDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+V +Y L+ GYC+ +R+D A +L EM +G PN + YNT+I GL + GR
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY L+ G+CK G L A ++ + M S P+ YN
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G ++DA L+ ++ G P+ Y ++ LCKE LD A++ + M+ G
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425
Query: 315 CDID 318
C D
Sbjct: 426 CPPD 429
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 17/373 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K +F A L D + PD T+ +I + G A F+
Sbjct: 51 LINGLGKVGKFAQAVELFDDMVARGCQPD---DYTYTTIINGLCKIGETALAAGLFK--- 104
Query: 61 NLDMVKNFDSGASL----FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
K ++G L + L+ SLCK RV A + F K D S PT+ Y L+
Sbjct: 105 -----KMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDIS--PTIFTYTSLI 157
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G K+A EM N+ PNVVT+ LV+ +C+ +V A ++K M + G+E
Sbjct: 158 QGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE 217
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ + YN+++ G E + + + P + +Y+ L+ GYCKA ++ A ++
Sbjct: 218 PDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQL 277
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
MI +G P+ +YN + G++ +A +L++ M +G P+ TY ILL CK
Sbjct: 278 FNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCK 337
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ L A ++ + M+ +L +L++ +C+ +A F ++ GL P+
Sbjct: 338 QGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397
Query: 357 FKRLNDEFKKRGM 369
+ + + K G+
Sbjct: 398 YTTIINGLCKEGL 410
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 171/377 (45%), Gaps = 11/377 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D + +L I P V TF LI + G A+ F+
Sbjct: 16 LINCFCQLQRVDLGFSVLAKGIKLGLQPTIV---TFTTLINGLGKVGKFAQAVELFD--- 69
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DMV + + +++ LCK G A+ F K +E V Y+ L++
Sbjct: 70 --DMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEE--AGCQLNVVTYSTLIHSL 125
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + V +A + M+ ++++P + TY +L++G C R A L+ EM I PN
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +N ++D + G+ G+++ P +VTY SL+ GY ++ A K+ +
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI++G P +Y+ + K ++++A L+ +MI G TP+ ++Y+ L+ LC+ +
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A + K M G +L T +L+ C+ +A F M L P+ + +
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365
Query: 360 LNDEFKKRGMTALAQKL 376
L + K G A++L
Sbjct: 366 LVNAMCKSGNLKDAREL 382
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 6/324 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + V A+ F + D+ + SL + LC R K AS
Sbjct: 117 TYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ----GLCNFSRWKEASAL 172
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++ L+ P V +N+L++ + + V AE M + V P+VVTY +L+ GY
Sbjct: 173 LNEMTSLN--IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGY 230
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
V A +L M +G +P+ Y+ +I+G +A R +E + + P
Sbjct: 231 SMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNN 290
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y +L+ G C+ G L A + K M + G LP+ TY F K G + A L+R
Sbjct: 291 VSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRA 350
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + P+ + Y+IL+ +CK L A ++ E+ G ++ T +I+ LC+
Sbjct: 351 MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK 358
DEA F +M G P ++
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYN 434
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL++ CK R+ A + F++ + Q P YN L++G + +++A+ +
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEM--IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PN+ TY L++G+C+ + +A RL + M+ ++PN ++YN +++ + ++G
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + V P + YT+++ G CK G L+ A + + M G P +YN
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
R F + A++L +M + G+ D T
Sbjct: 436 IIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++PN T L+ +C+L+RVD ++ + K G++P + + T+I+GL + G+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F + + + + P TYT+++ G CK G+ A+ + K M G + TY+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K+ +V +A++++ M +P TY L++ LC + A + EM
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T +L+ C+ K A + M G+ P +T+ L + A+
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 375 KLCNVM 380
KL +VM
Sbjct: 241 KLFDVM 246
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 169/361 (46%), Gaps = 40/361 (11%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L++ Y G +++A+ F + N + +L++ C G ++ ASE + +
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPN----KVTYSVLIEGCCNSGNIEKASELYTQM 386
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERF--------------------WL----- 133
K P+V N LL G+ ++ ++A + WL
Sbjct: 387 KL--NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGK 444
Query: 134 ---------EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
M + + PNVV+Y ++ G+CR +D A + +M ++PN + Y+
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 504
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+IDG + G E+ + ++ L PT T+ +++ G CK G + A LK + G
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
F+PS TYN F K G ++ A+ +YR+M E G +P+ +TY L+ CK +++DLA+
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ EM+ +G ++D+ + LI C+ + A F +++ GL P+ + + + F
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684
Query: 365 K 365
+
Sbjct: 685 R 685
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 170/344 (49%), Gaps = 10/344 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I++ + G ++ A + N MV N S + ++ C++G + AS
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS----YNDMILGHCRKGNMDMASSV 486
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F L + P V Y+IL++G F+ + + A + +M N+ P T+ T++ G
Sbjct: 487 FSDM--LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C++ ++ A +K +EG P+ + YN+++DG ++ G + + +CE G P
Sbjct: 545 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYRE--MCEFGVSP 602
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+VTYTSL+ G+CK+ ++ A K M +G T Y+ F K +E A +L+
Sbjct: 603 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 662
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+++E G +P+R+ Y+ ++ + ++ A+ K+M DL T T LI L +
Sbjct: 663 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 722
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ AS + +M+ +G+VP +TF L + +G A+K+
Sbjct: 723 GRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 766
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 175/373 (46%), Gaps = 19/373 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K + D A LL + + VP+ VS + ++ + R G ++ A F
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMIL---GHCRKGNMDMASSVFS--- 488
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ ++ + IL+D K+G + A + F + L+ APT +N ++NG
Sbjct: 489 --DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN--IAPTDFTFNTIINGL 544
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A +E P+ +TY ++V+G+ + +D A+ + +EM + G+ PN
Sbjct: 545 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 604
Query: 180 IVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+ Y ++I+G ++ R + M E+ L + + Y++L+ G+CK D+E A
Sbjct: 605 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELD----VTAYSALIDGFCKRRDMESAQD 660
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ ++ G P+ YN F +E A+ Y+KMI D TY L+ L
Sbjct: 661 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 720
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
KE +L A + EM +G D+ T +L++ LC + + A E+M R+ + P L
Sbjct: 721 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 780
Query: 356 TFKRLNDEFKKRG 368
+ L + + G
Sbjct: 781 IYNTLIAGYFREG 793
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 162/383 (42%), Gaps = 40/383 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F L+ Y RA +E AI F N + ++ ILL +L ++ + +
Sbjct: 152 VFNYLLNAYIRANRIENAIDCF----NAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 207
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++K L + V+ +++ + V++AE ++ E ++ V + Y +++
Sbjct: 208 YNKMV-LRGIYGDHFTVH-VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 265
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + + L++EM++ G P+ + +VI V G E + E + C +
Sbjct: 266 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNL 325
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V TSL+KGYC G+L+ A + + G P+ TY+ G +E A LY +
Sbjct: 326 VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ 385
Query: 275 MIESGYTP----------------------------------DRLTYHILLKILCKEDKL 300
M +G P + TY+I++ LCK K+
Sbjct: 386 MKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKM 445
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A + M +G ++ + +I CR D AS+ F DM+ R L P+ +T+ L
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505
Query: 361 NDEFKKRGMTALAQKLCNVMSSV 383
D K+G + A L + M S+
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSL 528
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 130/324 (40%), Gaps = 77/324 (23%)
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
RV+N LLN + R+ +++A + M ++V P V L+ R + L +
Sbjct: 151 RVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNK 210
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM----ERFLVCEPGPTMVTYTSLVKGYC 225
M GI + + ++ ++ GR EE ER + + G Y+ +++ C
Sbjct: 211 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAG----AYSIIIQAVC 266
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTY--------------------------------- 252
K + ++L+ M RG++PS T+
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 326
Query: 253 --NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+ + G ++ A+NL+ K+ E G P+++TY +L++ C ++ A ++ +M
Sbjct: 327 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386
Query: 311 KCRG---------------------------------CDI-DLDTSTMLIHLLCRMYKFD 336
K G C + ++ T +++ LC+ K D
Sbjct: 387 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMD 446
Query: 337 EASAEFEDMIRRGLVPHYLTFKRL 360
EA + ++M+ +G+VP+ +++ +
Sbjct: 447 EACSLLDNMVNQGMVPNVVSYNDM 470
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ L+ Y +A +E A MI + +P N + + + +LY KM
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G D T H++++ KE +++ A + +E K RG +D +++I +C+
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
+ E+M RG VP TF + +G A +L M + + M L+
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 326
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 169/361 (46%), Gaps = 40/361 (11%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L++ Y G +++A+ F + N + +L++ C G ++ ASE + +
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPN----KVTYSVLIEGCCNSGNIEKASELYTQM 426
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERF--------------------WL----- 133
K P+V N LL G+ ++ ++A + WL
Sbjct: 427 KL--NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGK 484
Query: 134 ---------EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
M + + PNVV+Y ++ G+CR +D A + +M ++PN + Y+
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 544
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+IDG + G E+ + ++ L PT T+ +++ G CK G + A LK + G
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
F+PS TYN F K G ++ A+ +YR+M E G +P+ +TY L+ CK +++DLA+
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ EM+ +G ++D+ + LI C+ + A F +++ GL P+ + + + F
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724
Query: 365 K 365
+
Sbjct: 725 R 725
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 171/348 (49%), Gaps = 10/348 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I++ + G ++ A + N MV N S + ++ C++G + AS
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS----YNDMILGHCRKGNMDMASSV 526
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F L + P V Y+IL++G F+ + + A + +M N+ P T+ T++ G
Sbjct: 527 FSDM--LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C++ ++ A +K +EG P+ + YN+++DG ++ G + + +CE G P
Sbjct: 585 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYRE--MCEFGVSP 642
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+VTYTSL+ G+CK+ ++ A K M +G T Y+ F K +E A +L+
Sbjct: 643 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 702
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+++E G +P+R+ Y+ ++ + ++ A+ K+M DL T T LI L +
Sbjct: 703 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 762
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ AS + +M+ +G+VP +TF L + +G A+K+ M
Sbjct: 763 GRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 810
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 175/373 (46%), Gaps = 19/373 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K + D A LL + + VP+ VS + ++ + R G ++ A F
Sbjct: 475 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMIL---GHCRKGNMDMASSVFS--- 528
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ ++ + IL+D K+G + A + F + L+ APT +N ++NG
Sbjct: 529 --DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN--IAPTDFTFNTIINGL 584
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A +E P+ +TY ++V+G+ + +D A+ + +EM + G+ PN
Sbjct: 585 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 644
Query: 180 IVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+ Y ++I+G ++ R + M E+ L + + Y++L+ G+CK D+E A
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELD----VTAYSALIDGFCKRRDMESAQD 700
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ ++ G P+ YN F +E A+ Y+KMI D TY L+ L
Sbjct: 701 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
KE +L A + EM +G D+ T +L++ LC + + A E+M R+ + P L
Sbjct: 761 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 820
Query: 356 TFKRLNDEFKKRG 368
+ L + + G
Sbjct: 821 IYNTLIAGYFREG 833
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 162/382 (42%), Gaps = 40/382 (10%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F L+ Y RA +E AI F N + ++ ILL +L ++ + + +
Sbjct: 193 FNYLLNAYIRANRIENAIDCF----NAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+K L + V+ +++ + V++AE ++ E ++ V + Y +++ C
Sbjct: 249 NKMV-LRGIYGDHFTVH-VMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 306
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + + L++EM++ G P+ + +VI V G E + E + C +V
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TSL+KGYC G+L+ A + + G P+ TY+ G +E A LY +M
Sbjct: 367 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426
Query: 276 IESGYTP----------------------------------DRLTYHILLKILCKEDKLD 301
+G P + TY+I++ LCK K+D
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMD 486
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + M +G ++ + +I CR D AS+ F DM+ R L P+ +T+ L
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 546
Query: 362 DEFKKRGMTALAQKLCNVMSSV 383
D K+G + A L + M S+
Sbjct: 547 DGNFKKGDSEKALDLFDQMLSL 568
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 130/324 (40%), Gaps = 77/324 (23%)
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
RV+N LLN + R+ +++A + M ++V P V L+ R + L +
Sbjct: 191 RVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNK 250
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM----ERFLVCEPGPTMVTYTSLVKGYC 225
M GI + + ++ ++ GR EE ER + + G Y+ +++ C
Sbjct: 251 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAG----AYSIIIQAVC 306
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTY--------------------------------- 252
K + ++L+ M RG++PS T+
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366
Query: 253 --NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+ + G ++ A+NL+ K+ E G P+++TY +L++ C ++ A ++ +M
Sbjct: 367 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426
Query: 311 KCRG---------------------------------CDI-DLDTSTMLIHLLCRMYKFD 336
K G C + ++ T +++ LC+ K D
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMD 486
Query: 337 EASAEFEDMIRRGLVPHYLTFKRL 360
EA + ++M+ +G+VP+ +++ +
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDM 510
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+ L+ Y +A +E A MI + +P N + + + +LY KM+
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G D T H++++ KE +++ A + +E K RG +D +++I +C+ +
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
E+M RG VP TF + +G A +L M + + M L+
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 147/288 (51%), Gaps = 3/288 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERFW 132
+ LL LC + R + A E H + D+ P V YN +LNG+F+ + A +
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + P+VVTY +++ C+ + +D+A+ ++ M K G+ P+ + YN+++ G +
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+ +E G +++ P +VTY+SL+ CK G A KI M RG P TY
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ ++ G + + L M+ +G PD ++IL+ K++K+D A+ V +M+
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G + ++ +I +LC+ D+A FE MI GL P+ + + L
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 168/333 (50%), Gaps = 13/333 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQ 85
PD T+ L++ YA G + E LD MV+N +F IL+ + KQ
Sbjct: 339 PDIA---TYRTLLQGYATKGAL------VEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+V A F K ++ P V Y +++ +S +V DA ++ +M E +TPN++
Sbjct: 390 EKVDQAMLVFSKMRQ--HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y +L+ G C + D+A L+ EM GI N I +N++ID + GR E + +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++TY +L+ G C AG ++ A+K+L M+S G P TY + + ++
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA+ L+++M+ SG +P+ +TY+I+L+ L + A ++ + G ++L T ++
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+H LC+ DEA F+++ L TF
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 660
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ V+ A+ F + + ++D LCK G V A YF
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQ----HGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ P + VY L++G AE LEM + N + + ++++ +C
Sbjct: 435 EQM--IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++P+ I YNT+IDG AG+ +E + ++ + P +V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC+ ++ A + K M+S G P+ TYN + + A LY +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+SG + TY+I+L LCK + D A+++ + + ++ T ++I L + +
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F GLVP T+ + + ++G
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 705
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 183/389 (47%), Gaps = 9/389 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L + +PD + T+ ++ Y +G + AI T +
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCM---TYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + N + +SL ++ LCK GR A + F + + P + Y LL G+
Sbjct: 299 SDGVEPNVVTYSSL----MNYLCKNGRSTEARKIFDSMTK--RGLEPDIATYRTLLQGYA 352
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + M + + P+ + L+ Y + +VD+A+ + +MR+ G+ PN +
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVID L ++G ++ E+ + P ++ YTSL+ G C + A +++ M
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG + +N K G+V ++ L+ M+ G PD +TY+ L+ C K+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ M G D+ T LI+ CR+ + D+A A F++M+ G+ P+ +T+ +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
TA A++L ++ +EL
Sbjct: 593 LQGLFHTRRTAAAKELYVSITKSGTQLEL 621
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 153/306 (50%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ K+G A +H+ LD+ P V Y+ ++ +++ + A
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEM--LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V P+ +TY +++ GYC + AI +K+MR +G+EPN + Y+++++ L + GR
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY +L++GY G L +L +M+ G P +N
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K KV+ AM ++ KM + G P+ + Y ++ +LCK +D A+ ++M G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LIH LC K+D+A +M+ RG+ + + F + D K G ++
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501
Query: 375 KLCNVM 380
KL ++M
Sbjct: 502 KLFDLM 507
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 9/367 (2%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++ D GG PD VS +T ++ + + G + A T+ + ++ + + +S+
Sbjct: 188 MMADDRGGGSPPDVVSYNT---VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
+LCK + A E + + P YN +L+G+ S K+A +MR
Sbjct: 245 ----ALCKAQAMDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V PNVVTY +L+ C+ R A ++ M K G+EP+ Y T++ G G
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E+ +++ + P + L+ Y K ++ A + M G P+ Y
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G V+DAM + +MI+ G TP+ + Y L+ LC DK D A ++ EM RG
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +I C+ + E+ F+ M+R G+ P +T+ L D G A KL
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Query: 377 CNVMSSV 383
M SV
Sbjct: 539 LASMVSV 545
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 6/316 (1%)
Query: 71 GASLFEI--LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
GAS++ + L + + A S Y + PTV Y IL+ R+ +
Sbjct: 52 GASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLG 111
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVID 187
+ K+ + +T+ L++G C +R A+ +V + M + G P+ YN ++
Sbjct: 112 FAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLK 171
Query: 188 GLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
GL + R +E ++ G P +V+Y +++ G+ K GD + A M+ RG
Sbjct: 172 GLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRG 231
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
LP TY+ K ++ AM + M+++G PD +TY+ +L C + AI
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
K+M+ G + ++ T + L++ LC+ + EA F+ M +RGL P T++ L +
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 365 KKRGMTALAQKLCNVM 380
+G L ++M
Sbjct: 352 ATKGALVEMHALLDLM 367
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++DS CK+GRV + + F + P + YN L++G + + +A +
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRI--GVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V P++VTYGTL+ GYCR+ R+D A+ L KEM G+ PN I YN ++ GL R
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + TY ++ G CK + A ++ + + T+N
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G++++A +L+ +G PD TY ++ + L ++ L+ + M+ G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Query: 315 CDID 318
C D
Sbjct: 722 CSAD 725
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VTP V TY L+ CR R+D + + K+G +AI + ++ GL R +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 200 GMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNY 254
++ R + E G P + +Y +L+KG C + A ++L MM G P +YN
Sbjct: 148 DIVLRRMT-ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G + A + Y +M++ G PD +TY ++ LCK +D A++V M G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T ++H C + EA + M G+ P+ +T+ L + K G + A+
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 375 KLCNVMS 381
K+ + M+
Sbjct: 327 KIFDSMT 333
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P + Y L+NG+ R + DA + E
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSV--GVKPDIVTYGTLINGYCRVSRMDDALALFKE 576
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+PN++TY +++G RR A L + K G + YN ++ GL +
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G ++ A + + G +P TY+
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G + D R+ I+ K+L + D
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 185/394 (46%), Gaps = 25/394 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +FD A+ ++ + VPD T+ +I A VE A F+ ++
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPD---TSTYSKVITFLCEAMKVEKAFLLFQEMKSV 484
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
++ + + + IL+DS CK G ++ A +F + + + S P+V Y LL+ + ++
Sbjct: 485 GVIPDVYT----YTILIDSFCKVGLIEQARSWFDEMESVGCS--PSVVTYTALLHAYLKT 538
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M PN +TY LV+G C+ +A + +M
Sbjct: 539 KQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFY 598
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ I PN + Y +IDGL +A + + +++ P + Y +L+ G+CK
Sbjct: 599 FEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCK 658
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A ++ M G+LP+ TY K +++ A+ + +M+ES TP+ +T
Sbjct: 659 VGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVT 718
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LC+ + A+++ M+ RGC+ ++ T T LI L + K D + F MI
Sbjct: 719 YTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMI 778
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G P+Y+T++ L + G+ A L + M
Sbjct: 779 TQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 187/442 (42%), Gaps = 66/442 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L +A + + A+ L + +PD T+ ILI + + G++E A F
Sbjct: 461 VITFLCEAMKVEKAFLLFQEMKSVGVIPDVY---TYTILIDSFCKVGLIEQARSWF---- 513
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
D +++ S+ + LL + K +V AS+ FH+ +D AP Y+ L++G
Sbjct: 514 --DEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRM--VDAGCAPNTITYSALVDG 569
Query: 119 WFRSKNVKDAERFWLEM----------------RKENVTPNVVTYGTLVEGYCRLRRVDR 162
++ + A + +M +++ PNVVTYG L++G C+ +V
Sbjct: 570 LCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVD 629
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC-------------- 208
A L+ M G EPN I+Y+ +IDG + G+ + + R C
Sbjct: 630 AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLID 689
Query: 209 ---------------------EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
P +VTYT+++ G C+ G+ + A K+L MM RG P
Sbjct: 690 AMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNP 749
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TY K GKV+ ++ L+ +MI G P+ +TY +L+ C LD A +
Sbjct: 750 NVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLL 809
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EMK + ++ + KF + E++ G+V + L D F K
Sbjct: 810 SEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKA 867
Query: 368 GMTALAQKLCNVMSSVPRSMEL 389
G A +L M V S+ +
Sbjct: 868 GRLEKALELHKEMMEVSSSLNI 889
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 149/310 (48%), Gaps = 7/310 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK G++ A E F + + + PTV Y L++ F+ + + A +
Sbjct: 648 IYDALIDGFCKVGKLDNAQEVFFRMSKC--GYLPTVHTYTSLIDAMFKDRRLDLAIKVLS 705
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + TPNVVTY +++G CR+ +A++L+ M K G PN + Y ++IDGL ++G
Sbjct: 706 QMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSG 765
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + + + P VTY L+ C AG L+ A +L M + Y
Sbjct: 766 KVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYC 825
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ FSK K ++ L ++ G Y +L+ K +L+ A+++ KEM
Sbjct: 826 SVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEV 883
Query: 314 GCDIDL---DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+++ DT T LI LC + ++A + ++ R+G+VP F L K
Sbjct: 884 SSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKW 943
Query: 371 ALAQKLCNVM 380
A +LC M
Sbjct: 944 NEALQLCYSM 953
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 126/295 (42%), Gaps = 11/295 (3%)
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + H+ + S P V Y LL G+ + K + +R M E PN + +L
Sbjct: 293 AISFLHRMR--CNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSL 350
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE------VSGMMER 204
V YC R A +L+ M G P +VYN I + + E
Sbjct: 351 VHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEE 410
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L V + + C G + A +I+K+M+ +GF+P +TY+ + + K
Sbjct: 411 MLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMK 470
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
VE A L+++M G PD TY IL+ CK ++ A EM+ GC + T T
Sbjct: 471 VEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
L+H + + +AS F M+ G P+ +T+ L D K G + QK C V
Sbjct: 531 LLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGES---QKACEV 582
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 17/334 (5%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L +++ C+ G A E + K D + P+ YN L+ + + R
Sbjct: 174 LLNVIVRKCCRHGAWAKALEELGRLK--DFGYRPSGATYNALVQVLATAGQMDMGFRVQK 231
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + T G + C+ R A+ +++ +E + + ++ +I GL+EA
Sbjct: 232 EMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIE---REDFKLDTVLCTQMISGLMEAS 288
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F+E + R P +VTY +L+ G+ K L +I+ MM++ G P+P+ +N
Sbjct: 289 LFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFN 348
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC------KEDKLDLAIQVS 307
+ A L +M G P + Y+I + +C D L LA +V
Sbjct: 349 SLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVY 408
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR----LNDE 363
+EM C ++ + LC M KFD+A + M+R+G VP T+ + L +
Sbjct: 409 EEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEA 468
Query: 364 FKKRGMTALAQKL--CNVMSSVPRSMELLDSRCK 395
K L Q++ V+ V L+DS CK
Sbjct: 469 MKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCK 502
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 120/282 (42%), Gaps = 14/282 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K + D A +L + P+ V T+ +I R G + A+
Sbjct: 687 LIDAMFKDRRLDLAIKVLSQMLESSCTPNVV---TYTAMIDGLCRIGECQKALKLLSMME 743
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D L K G+V + + F + + Q AP Y +L+N
Sbjct: 744 K----RGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM--ITQGCAPNYVTYRVLINHCC 797
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A EM++ V Y ++V+G+ + + ++ L++E+ G+ A
Sbjct: 798 AAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAP 855
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV---TYTSLVKGYCKAGDLEGASKIL 237
VY +ID +AGR E+ + + + + TYTSL++ C A LE A ++
Sbjct: 856 VYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELY 915
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+ +G +P + + + K K +A+ L M + G
Sbjct: 916 SEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
+I L K+ + D + L I P++V T+ +LI AG+++ A
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYV---TYRVLINHCCAAGLLDEAHSLLSEMK 813
Query: 53 --IW--------------TFEFANNLDMVKNFDSG-----ASLFEILLDSLCKQGRVKAA 91
W + +F +L +++ +S A ++ +L+DS K GR++ A
Sbjct: 814 QTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKA 873
Query: 92 SEYFHKRKELDQSWAPTVR-VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E + E+ S T + Y L+ + ++ A + E+ ++ V P + + L
Sbjct: 874 LELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICL 933
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++G ++ + + A++L M EG+ + N DG
Sbjct: 934 IKGLIKVNKWNEALQLCYSMCDEGVNWQS---NNSFDG 968
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 186/380 (48%), Gaps = 12/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ A + +FDS LL +I + + +F+++ R Y +A + + A+ F
Sbjct: 83 MIESYANSGDFDSVE-KLLSRIRLEN--RVIIERSFIVVFRAYGKAHLPDKAVDLFH--- 136
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILL 116
MV F S+ F +L+ + +G E++ ++ + +P +N+++
Sbjct: 137 --RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVI 194
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + V A + M + P+ TY TL++G C+ R+D A+ L+ EM+ EG
Sbjct: 195 KALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCS 254
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ ++YN +IDGL + G V+ +++ + P VTY +L+ G C G L+ A +
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L+ M+S +P+ TY K + DA+ L M E GY ++ Y +L+ L K
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E K + A+ + ++M +GC ++ ++L+ LCR K +EA MI G +P+ T
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 357 FKRLNDEFKKRGMTALAQKL 376
+ L F K G+ A ++
Sbjct: 435 YSSLMKGFFKTGLCEEAVQV 454
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 37/364 (10%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +F ++ G+ + +++ N +M N F +++ +LCK V A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRA 206
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E F E + P Y L++G + + + +A EM+ E +P+ V Y L+
Sbjct: 207 IEVFRGMPE--RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C+ + R +LV M +G PN + YNT+I GL G+ ++ ++ER + +
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VTY +L+ G K A ++L M RG+ + Y+ K GK E+AM+L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDK-------------------------------- 299
+RKM E G P+ + Y +L+ LC+E K
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 300 ---LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ A+QV KEM GC + ++LI LC + + EA + M+ G+ P +
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 357 FKRL 360
+ +
Sbjct: 505 YSSI 508
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ +L+D LCK+G + ++ + P YN L++G + A
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNM--FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M PN VTYGTL+ G + RR A+RL+ M + G N +Y+ +I GL + G
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ EE + + P +V Y+ LV G C+ G A +IL MI+ G LP+ TY+
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F K G E+A+ ++++M ++G + ++ Y +L+ LC ++ A+ V +M
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
G D + +I LC + D A + +M+
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 5/285 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC +G++ A + + P Y L+NG + + DA R
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERM--VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N Y L+ G + + + A+ L ++M ++G +PN +VY+ ++DGL G+
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ R + P TY+SL+KG+ K G E A ++ K M G + Y+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR- 313
G+V++AM ++ KM+ G PD + Y ++K LC +D A+++ EM C+
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 314 --GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
D+ T +L+ LC A M+ RG P +T
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 149/328 (45%), Gaps = 13/328 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ V+ +T LI G ++ A+ E + + N + L++ L KQ
Sbjct: 289 VPNEVTYNT---LIHGLCLKGKLDKAVSLLERMVSSKCIPN----DVTYGTLINGLVKQR 341
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A +E + + +Y++L++G F+ ++A W +M ++ PN+V
Sbjct: 342 RATDAVRLLSSMEE--RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y LV+G CR + + A ++ M G PNA Y++++ G + G EE + +
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
Y+ L+ G C G ++ A + M++ G P Y+ + G ++
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 267 DAMNLYRKMI---ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
A+ LY +M+ E PD +TY+ILL LC + + A+ + M RGCD D+ T
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCN 579
Query: 324 MLIHLLC-RMYKFDEASAEFEDMIRRGL 350
++ L + D+ + E+++ R L
Sbjct: 580 TFLNTLSEKSNSCDKGRSFLEELVVRLL 607
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L++ + + G+ E A+ ++ + +N + +L+D LC GRVK A
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN----KFCYSVLIDGLCGVGRVKEAMMV 489
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM---RKENVTPNVVTYGTLV 151
+ K L P Y+ ++ G ++ A + + EM + P+VVTY L+
Sbjct: 490 WSKM--LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C + + RA+ L+ M G +P+ I NT ++ L E C+ G
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN------------SCDKG 595
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ + LV K + GA I+++M+ + P +T+ R K K+ A++
Sbjct: 596 RSFL--EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 54/212 (25%)
Query: 216 TYTSLVKGYCKAGDLEGASKIL-------KMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
T +S+++ Y +GD + K+L +++I R F+ FR + K + A
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFI-------VVFRAYGKAHLPDKA 131
Query: 269 MNLYRKMIES----------------------------------------GYTPDRLTYH 288
++L+ +M++ +P+ L+++
Sbjct: 132 VDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFN 191
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
+++K LCK +D AI+V + M R C D T L+ LC+ + DEA ++M
Sbjct: 192 LVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSE 251
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
G P + + L D K+G KL + M
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 147/288 (51%), Gaps = 3/288 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERFW 132
+ LL LC + R + A E H + D+ P V YN +LNG+F+ + A +
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + P+VVTY +++ C+ + +D+A+ ++ M K G+ P+ + YN+++ G +
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+ +E G +++ P +VTY+SL+ CK G A KI M RG P TY
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ ++ G + + L M+ +G PD ++IL+ K++K+D A+ V +M+
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G + ++ +I +LC+ D+A FE MI GL P+ + + L
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 165/320 (51%), Gaps = 13/320 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQ 85
PD T+ L++ YA G + E LD MV+N +F IL+ + KQ
Sbjct: 339 PDIA---TYRTLLQGYATKGAL------VEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+V A F K ++ P V Y +++ +S +V DA ++ +M E +TPN++
Sbjct: 390 EKVDQAMLVFSKMRQ--HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y +L+ G C + D+A L+ EM GI N I +N++ID + GR E + +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++TY +L+ G C AG ++ A+K+L M+S G P TY + + ++
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA+ L+++M+ SG +P+ +TY+I+L+ L + A ++ + G ++L T ++
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627
Query: 326 IHLLCRMYKFDEASAEFEDM 345
+H LC+ DEA F+++
Sbjct: 628 LHGLCKNNLTDEALRMFQNL 647
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 160/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ V+ A+ F + N + ++D LCK G V A YF
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV----VCYGTVIDVLCKSGSVDDAMLYF 434
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ P + VY L++G AE LEM + N + + ++++ +C
Sbjct: 435 EQM--IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++P+ I YNT+IDG AG+ +E + ++ + P +V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC+ ++ A + K M+S G P+ TYN + + A LY +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+SG + TY+I+L LCK + D A+++ + + ++ T ++I L + +
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F GLVP T+ + + ++G
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 705
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 178/376 (47%), Gaps = 9/376 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L + +PD + T+ ++ Y +G + AI T +
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCM---TYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + N + +SL ++ LCK GR A + F + + P + Y LL G+
Sbjct: 299 SDGVEPNVVTYSSL----MNYLCKNGRSTEARKIFDSMTK--RGLEPDIATYRTLLQGYA 352
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + M + + P+ + L+ Y + +VD+A+ + +MR+ G+ PN +
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVID L ++G ++ E+ + P ++ YTSL+ G C + A +++ M
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG + +N K G+V ++ L+ M+ G PD +TY+ L+ C K+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ M G D+ T LI+ CR+ + D+A A F++M+ G+ P+ +T+ +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592
Query: 361 NDEFKKRGMTALAQKL 376
TA A++L
Sbjct: 593 LQGLFHTRRTAAAKEL 608
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 153/306 (50%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ K+G A +H+ LD+ P V Y+ ++ +++ + A
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEM--LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V P+ +TY +++ GYC + AI +K+MR +G+EPN + Y+++++ L + GR
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY +L++GY G L +L +M+ G P +N
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K KV+ AM ++ KM + G P+ + Y ++ +LCK +D A+ ++M G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LIH LC K+D+A +M+ RG+ + + F + D K G ++
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501
Query: 375 KLCNVM 380
KL ++M
Sbjct: 502 KLFDLM 507
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 9/367 (2%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++ D GG PD VS +T ++ + + G + A T+ + ++ + + +S+
Sbjct: 188 MMADDRGGGSPPDVVSYNT---VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
+LCK + A E + + P YN +L+G+ S K+A +MR
Sbjct: 245 ----ALCKAQAMDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V PNVVTY +L+ C+ R A ++ M K G+EP+ Y T++ G G
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E+ +++ + P + L+ Y K ++ A + M G P+ Y
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G V+DAM + +MI+ G TP+ + Y L+ LC DK D A ++ EM RG
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +I C+ + E+ F+ M+R G+ P +T+ L D G A KL
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Query: 377 CNVMSSV 383
M SV
Sbjct: 539 LASMVSV 545
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 6/316 (1%)
Query: 71 GASLFEI--LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
GAS++ + L + + A S Y + PTV Y IL+ R+ +
Sbjct: 52 GASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLG 111
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVID 187
+ K+ + +T+ L++G C +R A+ +V + M + G P+ YN ++
Sbjct: 112 FAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLK 171
Query: 188 GLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
GL + R +E ++ G P +V+Y +++ G+ K GD + A M+ RG
Sbjct: 172 GLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRG 231
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
LP TY+ K ++ AM + M+++G PD +TY+ +L C + AI
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
K+M+ G + ++ T + L++ LC+ + EA F+ M +RGL P T++ L +
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 365 KKRGMTALAQKLCNVM 380
+G L ++M
Sbjct: 352 ATKGALVEMHALLDLM 367
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++DS CK+GRV + + F + P + YN L++G + + +A +
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRI--GVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V P++VTYGTL+ GYCR+ R+D A+ L KEM G+ PN I YN ++ GL R
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + TY ++ G CK + A ++ + + T+N
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G++++A +L+ +G PD TY ++ + L ++ L+ + M+ G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721
Query: 315 CDID 318
C D
Sbjct: 722 CSAD 725
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VTP V TY L+ CR R+D + + K+G +AI + ++ GL R +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 200 GMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNY 254
++ R + E G P + +Y +L+KG C + A ++L MM G P +YN
Sbjct: 148 DIVLRRMT-ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G + A + Y +M++ G PD +TY ++ LCK +D A++V M G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T ++H C + EA + M G+ P+ +T+ L + K G + A+
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 375 KLCNVMS 381
K+ + M+
Sbjct: 327 KIFDSMT 333
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P + Y L+NG+ R + DA + E
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSV--GVKPDIVTYGTLINGYCRVSRMDDALALFKE 576
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+PN++TY +++G RR A L + K G + YN ++ GL +
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G ++ A + + G +P TY+
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G + D R+ I+ K+L + D
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 12/357 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V T+ ++ ++G VE A F + +V N S A+L +DSL K+G
Sbjct: 119 VPDVV---TYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATL----IDSLFKEG 171
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A + + + + + V VY L++G F++ +AE + + +E++ PN VT
Sbjct: 172 NV--AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVT 229
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L++G+C+L V++ L++EM ++ I PN IVY++++DG + G E +M + +
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + Y +L+ GY KA A + K M SRG + + F + G++E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L++ M+ G PDR+ Y ++ K K A +++EM + D+ +LI
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409
Query: 327 HLLCRMYKFDEASAEFEDMIRR-GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L ++ K++ S F +R+ GL P TF + + + K G A KL N M S
Sbjct: 410 NGLFKLGKYE--SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 155/315 (49%), Gaps = 2/315 (0%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N + + L+D+ CK ++ A Y + + +S P V Y ++NG +S V+
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDAL-YMYDEMTV-KSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A+ + EM + V PN +Y TL++ + V A L M GI + +VY ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DGL +AG M + L P VTY++L+ G+CK GD+ +L+ M +
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ Y+ ++K G + +AM++ RKM++ P+ Y L+ K D+ +A+ +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
KEMK RG + + ++ L R + +EA F+DM+ RGL+P + + + D F K
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 367 RGMTALAQKLCNVMS 381
G + A + M+
Sbjct: 380 AGKESDAFNIAQEMT 394
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V + L++GYCR + RA+ L++ M+ EG P+ + YNT+++G + G +M
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P ++TYT+L+ YCK+ LE A + M + +P TY K
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GKVE+A +++R+M E G P+R +Y L+ L KE + A + M RG D+
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T L+ L + + A F+ ++ LVP+ +T+ L D K G
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 24/371 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +I Y + G + A+ + + N + IL+ LC G ++ +
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPN----SITCNILVQRLCAAGEIEKTMDL 493
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ L + PT + +L+ +S+ ++ V ++ TY TL+ +
Sbjct: 494 LNDM--LVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTF 551
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CRL + RA + K+M +GI + I YN +I G + ++ + + L P +
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY L+ G A ++ A+ ++ M RG +P+ TTY+ K G +++ + LY +
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G+ P TY++L+ K K+ A ++ +EM+ RG I ++ST I L+C YK
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRG--IPPNSSTYDI-LICGWYK 728
Query: 335 FD---------------EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
EA FE+M +G +P T ++ K G A AQ++ N
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNK 788
Query: 380 MSSVPRSMELL 390
+ ELL
Sbjct: 789 LYKKKTVQELL 799
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 147/325 (45%), Gaps = 44/325 (13%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF------------- 120
++ ++D K+G + A + RK + ++ P V VY L++G+F
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVM--RKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 121 ----------------------RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
RS +++A+ + +M + P+ V Y ++++G+ +
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS---GMMERFLVCEPGPTMV 215
+ A + +EM ++ + + YN +I+GL + G++E S GM + L P
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGL----APDSA 437
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+ +++ YCK G+L A K+L M S G P+ T N + G++E M+L M
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G+ P T+ +L K + D+ + ++ G +DL T LI CR+
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
A+ F+DM+ +G++ +T+ L
Sbjct: 558 RRATLVFKDMMGKGILADIITYNAL 582
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+V +N+L++G+ R+ + A M+ E P++VTY TL+ G+C++ + A +L+
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
E+ +EPN I Y T+ID ++ E+ M + V P +VTYT ++ G CK+
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G +E A + + M G +P+ +Y K G V +A L +M+ G D + Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 288 HILLKILCK-------EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
L+ L K ED + ++ S C T + LI C++ ++
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCV-------TYSALIDGHCKLGDVNKGEL 248
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
++M + + P+ + + + D + K+G+
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 140/307 (45%), Gaps = 3/307 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ L K G+ + SE FH AP +N ++N + + N+ +A + E
Sbjct: 405 YNVLINGLFKLGKYE--SESFHTGMR-QLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + PN +T LV+ C +++ + L+ +M G P + V+D ++ R
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + ++ + + TY +L+ +C+ G + A+ + K M+ +G L TYN
Sbjct: 522 ADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ A ++ +M+ G +P+ TY+ILL L + A + +MK RG
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T +L+ ++ E + +MI +G VP T+ L F K + A+
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAK 701
Query: 375 KLCNVMS 381
+L M
Sbjct: 702 ELMQEMQ 708
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%)
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + + G++ A+ L M G PD +TY+ L+ CK L A ++ E+
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ ++ T T LI C+ ++A +++M + LVP +T+ + + K G
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 372 LAQKLCNVMSSV 383
A+ + M V
Sbjct: 140 EAKSVFREMEEV 151
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 177/385 (45%), Gaps = 47/385 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ KA++ A LL + P V TF LIR+ + A+ F
Sbjct: 58 LIRGFCKAEQIPQAVNLLGEMKAAGITPTIV---TFGSLIRKLCELNFTDKALQIFH--Q 112
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+DM D A L+ +++ LCK ++ A+ YF + + P Y +L++ F
Sbjct: 113 MIDMKVKPD--AFLYTVVIGHLCKINKLDLAASYFERM--VQSGCLPDKVTYTVLVHSLF 168
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + + + EM + +P +VTY T+V GYC+ R+D+A+ L++ ++ G P+
Sbjct: 169 KACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGS 228
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y+T+IDGL + R +E + E + ++ YTS + G CKAG L+ A + M
Sbjct: 229 LYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKM 286
Query: 241 ISRGFLPSPTTYNYFFRYFSKFG-----------------------------------KV 265
I G P P +YN K +V
Sbjct: 287 IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRV 346
Query: 266 EDAMNLYRKMIESG-YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
E+A + +M+E+G P +TY ++ LCK D+LD A V ++M+ GC D+ T T
Sbjct: 347 EEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTA 406
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRG 349
+I C++ + DEA F+ M RG
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHERG 431
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 171/346 (49%), Gaps = 12/346 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA +++ + + + P+ V T+ ++ Y +AG ++ A+
Sbjct: 163 LVHSLFKACKWEQGHQIFEEMLSKGHSPELV---TYATVVNGYCKAGRIDQAL---SLMR 216
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L SG SL+ L+D LCK R A E F E+ V VY ++G
Sbjct: 217 RLKGTGRSPSG-SLYSTLIDGLCKHDRHDEARELF----EMAAGDVQDVIVYTSFISGLC 271
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A+ ++M + P+ V+Y ++ C+ RV A L+ + + P
Sbjct: 272 KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVP 331
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
V ++DGL ++ R EE ++ER L + P++VTY++++ G CKA L+ A +L+
Sbjct: 332 VCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQK 391
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G +P TY F K G++++A L+++M E G D + Y+IL++ C+ K
Sbjct: 392 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAK 451
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+D AI + +EM RG ++ + + ++ LC+ + +EA E M
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 14/329 (4%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
SL E+ ++ C + Y + EL + P Y L+ G+ +++ + A
Sbjct: 22 SLLEVFVNDGCHR------EAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM+ +TP +VT+G+L+ C L D+A+++ +M ++P+A +Y VI L +
Sbjct: 76 GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ + + ER + P VTYT LV KA E +I + M+S+G P TY
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K G+++ A++L R++ +G +P Y L+ LCK D+ D A ++ EM
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMA- 253
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
G D+ T I LC+ K DEA A MI G P +++ + K +
Sbjct: 254 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313
Query: 373 AQKLCN------VMSSVPRSMELLDSRCK 395
A++L + M VP L+D CK
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCK 342
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G + N N++++ V G E + + LV P TY +L++G+CKA +
Sbjct: 10 RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A +L M + G P+ T+ R + + A+ ++ +MI+ PD Y +++
Sbjct: 70 QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LCK +KLDLA + M GC D T T+L+H L + K+++ FE+M+ +G
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
P +T+ + + + K G A L + RS L+D CK
Sbjct: 190 PELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCK 239
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 12/357 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V T+ ++ ++G VE A F + +V N S A+L +DSL K+G
Sbjct: 119 VPDVV---TYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATL----IDSLFKEG 171
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A + + + + + V VY L++G F++ +AE + + +E++ PN VT
Sbjct: 172 NV--AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVT 229
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L++G+C+L V++ L++EM ++ I PN IVY++++DG + G E +M + +
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + Y +L+ GY KA A + K M SRG + + F + G++E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L++ M+ G PDR+ Y ++ K K A +++EM + D+ +LI
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409
Query: 327 HLLCRMYKFDEASAEFEDMIRR-GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L ++ K++ S F +R+ GL P TF + + + K G A KL N M S
Sbjct: 410 NGLFKLGKYE--SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 155/315 (49%), Gaps = 2/315 (0%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N + + L+D+ CK ++ A Y + + +S P V Y ++NG +S V+
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDAL-YMYDEMTV-KSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A+ + EM + V PN +Y TL++ + V A L M GI + +VY ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DGL +AG M + L P VTY++L+ G+CK GD+ +L+ M +
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ Y+ ++K G + +AM++ RKM++ P+ Y L+ K D+ +A+ +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
KEMK RG + + ++ L R + +EA F+DM+ RGL+P + + + D F K
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 367 RGMTALAQKLCNVMS 381
G + A + M+
Sbjct: 380 AGKESDAFNIAQEMT 394
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V + L++GYCR + RA+ L++ M+ EG P+ + YNT+++G + G +M
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P ++TYT+L+ YCK+ LE A + M + +P TY K
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GKVE+A +++R+M E G P+R +Y L+ L KE + A + M RG D+
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T L+ L + + A F+ ++ LVP+ +T+ L D K G
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 24/371 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +I Y + G + A+ + + N + IL+ LC G ++ +
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPN----SITCNILVQRLCAAGEIEKTMDL 493
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ L + PT + +L+ +S+ ++ V ++ TY TL+ +
Sbjct: 494 LNDM--LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CRL + RA + K+M +GI + I YN +I G + ++ + + L P +
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY L+ G A ++ A+ ++ M RG +P+ TTY+ K G +++ + LY +
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G+ P TY++L+ K K+ A ++ +EM+ RG I ++ST I L+C YK
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRG--IPPNSSTYDI-LICGWYK 728
Query: 335 FD---------------EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
EA FE+M +G +P T ++ K G A AQ++ N
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNK 788
Query: 380 MSSVPRSMELL 390
+ ELL
Sbjct: 789 LYKKKTVQELL 799
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 8/313 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++D K G+ S+ F+ +E+ ++S V YN+L+NG F+ ++E F MR
Sbjct: 373 MMDGFFKAGK---ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ + P+ T+ T++ YC+ + A++L+ EM+ G++PN+I N ++ L AG E
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ ++ LV PT T+ +++ K+ + + ++ G +TYN
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLI 548
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
F + G + A +++ M+ G D +TY+ L+ C L A V +M G
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG-MTALAQK 375
+++T +L+ L EA+ M RGLVP+ T+ L K G M +
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668
Query: 376 LCNVMSS--VPRS 386
C +++ VP++
Sbjct: 669 YCEMITKGFVPKT 681
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+V +N+L++G+ R+ + A M+ E P++VTY TL+ G+C++ + A +L+
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
E+ +EPN I Y T+ID ++ E+ M + V P +VTYT ++ G CK+
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G +E A + + M G +P+ +Y K G V +A L +M+ G D + Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 288 HILLKILCK-------EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
L+ L K ED + ++ S C T + LI C++ ++
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCV-------TYSALIDGHCKLGDVNKGEL 248
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
++M + + P+ + + + D + K+G+
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%)
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + + G++ A+ L M G PD +TY+ L+ CK L A ++ E+
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ ++ T T LI C+ ++A +++M + LVP +T+ + + K G
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 372 LAQKLCNVMSSV 383
A+ + M V
Sbjct: 140 EAKSVFREMEEV 151
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 153/305 (50%), Gaps = 11/305 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGM-VEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD + T+ LIR + R G E E N KN + F +L+D+ C++G
Sbjct: 257 PDIL---TYTSLIRGFCRTGQWGEVKQLMCEMVN-----KNINPNVYTFNVLIDAFCRKG 308
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A F+ + Q P + +N L++G NV +A + + + + + P+V +
Sbjct: 309 KMIEAQGMFNLMVKRGQQ--PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ GYC+ +R+D A+ L EMR + + + ++Y+++IDGL ++GR +
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P P ++TY L+ +CK D++ ++ K+M +G P+ TYN + K ++
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR 486
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+AMNL M PD +TY+ L LCK ++ A ++ K M G +D+ T +L+
Sbjct: 487 EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546
Query: 327 HLLCR 331
C+
Sbjct: 547 DAFCK 551
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 158/328 (48%), Gaps = 10/328 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L++ LCK GR + + F +E++ Q P + +YN++++ + + + A +L
Sbjct: 192 YGTLINGLCKIGR---SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYL 248
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++ + P+++TY +L+ G+CR + +L+ EM + I PN +N +ID G
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E GM + P +VT+ +L+ G+C G++ A K+ + RG LP +Y
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ K ++++A++L+ +M D + Y L+ LCK ++ A ++ +
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T +LI C++ D F+ M +GL P LT+ L + + K A
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488
Query: 374 QKLCNVMSS---VPRSM---ELLDSRCK 395
L +VM S P S+ L D CK
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCK 516
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 149/328 (45%), Gaps = 8/328 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ +++DS CK A + + K +D P + Y L+ G+ R+ + ++
Sbjct: 226 IYNMIIDSFCKDELTCKARDLY--LKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMC 283
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM +N+ PNV T+ L++ +CR ++ A + M K G +P+ + +NT+I G G
Sbjct: 284 EMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHG 343
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E + + P + +YT L+ GYCK ++ A + M + + Y+
Sbjct: 344 NVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYS 403
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G++ A L+ + G P+ +TY+IL+ CK +D+ I++ K M +
Sbjct: 404 SLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGK 463
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + T +LI+ C+ + EA M + L P +T+ L D K G + A
Sbjct: 464 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 523
Query: 374 QKLCNVMS------SVPRSMELLDSRCK 395
+L VM V LLD+ CK
Sbjct: 524 WELFKVMHVGGPPVDVATYNVLLDAFCK 551
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 2/289 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++ LC G V+ A + FH V Y L+NG + DA + EM
Sbjct: 160 VMKGLCINGEVQKAMD-FHDNVAAQGMLLDEV-CYGTLINGLCKIGRSIDAFQLLQEMEG 217
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ V PN+V Y +++ +C+ +A L ++ GI+P+ + Y ++I G G++ E
Sbjct: 218 QVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGE 277
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
V +M + P + T+ L+ +C+ G + A + +M+ RG P T+N
Sbjct: 278 VKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLIS 337
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
G V +A L+ + E G PD +Y IL+ CK ++D A+ + EM+C+ +
Sbjct: 338 GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVL 397
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
D+ + LI LC+ + A F + G P+ +T+ L D F K
Sbjct: 398 DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCK 446
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ ILI Y + ++ A+ F N KN L+ L+D LCK GR+ A E
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLF----NEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + P V YNIL++ + + +++ + M + +TP V+TY L+ GY
Sbjct: 422 FSTIN--NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 479
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +R+ A+ L+ M+ + + P++I YN++ DGL ++GR + + + V P +
Sbjct: 480 CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDV 539
Query: 215 VTYTSLVKGYCKAGDL 230
TY L+ +CKA D+
Sbjct: 540 ATYNVLLDAFCKAQDV 555
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 4/272 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+V +N ++ + K+ A +M + VTP++ T + YC L + A +
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGY 224
+ + K G +PN I TV+ GL G ++ + V G + V Y +L+ G
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDN--VAAQGMLLDEVCYGTLINGL 199
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G A ++L+ M + P+ YN F K A +LY K+++ G PD
Sbjct: 200 CKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDI 259
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
LTY L++ C+ + Q+ EM + + ++ T +LI CR K EA F
Sbjct: 260 LTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
M++RG P +TF L G A+KL
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 351
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ DA + + P+V+ + T++ +++ AI L+K+M +G+ P+ +
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
I+ G ++ L P +T T+++KG C G+++ A + ++G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
L Y K G+ DA L ++M P+ + Y++++ CK++ A
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ ++ G D D+ T T LI CR ++ E +M+ + + P+ TF L D F
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304
Query: 365 KKRGMTALAQKLCNVM 380
++G AQ + N+M
Sbjct: 305 CRKGKMIEAQGMFNLM 320
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ S F ++DA+ L+ +I P + ++ ++ + K +AI + K+M +G
Sbjct: 57 KILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVT 116
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T ++ I+ C + + A + +++RG P+ +T L K + QK
Sbjct: 117 PSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNIT---LTTVMKGLCINGEVQKA 173
Query: 377 CNVMSSVPRSMELLDSRC 394
+ +V LLD C
Sbjct: 174 MDFHDNVAAQGMLLDEVC 191
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 13/388 (3%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+ + K DSA + +L+ G +V F LI Y +G + AI F
Sbjct: 35 LIQTVVSRKGKDSASAVFAAILETKGTQRSDIYV----FSGLITAYLESGFIRDAIECFR 90
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FD+ ++ E L+ K K ++ ++ L+ + ++ +NIL++
Sbjct: 91 LTKKHSFRVPFDTCRNVLEHLM----KXKYFKLVWGFY--KEILECGYPASLYFFNILMH 144
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + ++ A+ + + K + P+VV++ TL+ GY +L +D RL MR G++P
Sbjct: 145 RFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQP 204
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I+GL + R +E +G+ L P VT+T+L+ G+CK G L+ A I
Sbjct: 205 DVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIY 264
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M+++GF P TYN K G ++ A L +M G PD++TY L+ CKE
Sbjct: 265 RQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKE 324
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A ++ + M +D T LI LC+ + +A +M+R GL P T+
Sbjct: 325 GDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETY 384
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPR 385
+ +EF K+G A +L M R
Sbjct: 385 TMIMNEFCKKGDVKKASELLREMQRNGR 412
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + W P+V +N L+NG+ + ++ + R
Sbjct: 138 FFNILMHRFCKEGEMRLAQSVF----DAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
MR V P+V TY L+ G C+ R+D A L EM G+ PN + + T+IDG +
Sbjct: 194 KNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + + L P +VTY +L+ G CK GDL+ A +L M +G P T
Sbjct: 254 NGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A L +MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D +T TM+++ C+ +AS +M R G VP +T
Sbjct: 374 RVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 6/260 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ + L+ Y + AI + +K V++ L++ F+ V G
Sbjct: 65 DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFY 124
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L C ++ + L+ +CK G++ A + + G PS ++N + K
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G +++ L M SG PD TY +L+ LCKE ++D A + EM G + T
Sbjct: 185 GDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTF 244
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T LI C+ + D A + M+ +G P +T+ L K+G A+ L + MS
Sbjct: 245 TTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSR 304
Query: 383 ---VPRSM---ELLDSRCKD 396
P + L+D CK+
Sbjct: 305 KGLKPDKITYTTLIDGSCKE 324
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 12/357 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V T+ ++ ++G VE A F + +V N S A+L +DSL K+G
Sbjct: 119 VPDVV---TYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATL----IDSLFKEG 171
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A + + + + + V VY L++G F++ +AE + + +E++ PN VT
Sbjct: 172 NV--AEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVT 229
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L++G+C+L V++ L++EM ++ I PN IVY++++DG + G E +M + +
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + Y +L+ GY KA A + K M SRG + + F + G++E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L++ M+ G PDR+ Y ++ K K A +++EM + D+ +LI
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409
Query: 327 HLLCRMYKFDEASAEFEDMIRR-GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L ++ K++ S F +R+ GL P TF + + + K G A KL N M S
Sbjct: 410 NGLFKLGKYE--SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKS 464
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 150/302 (49%), Gaps = 2/302 (0%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N + + L+D+ CK ++ A Y + + +S P V Y ++NG +S V+
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDAL-YMYDEMTV-KSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A+ + EM + V PN +Y TL++ + V A L M GI + +VY ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DGL +AG M + L P VTY++L+ G+CK GD+ +L+ M +
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ Y+ ++K G + +AM++ RKM++ P+ Y L+ K D+ +A+ +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
KEMK RG + + ++ L R + +EA F+DM+ RGL+P + + + D F K
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 367 RG 368
G
Sbjct: 380 AG 381
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V + L++GYCR + RA+ L++ M+ EG P+ + YNT+++G + G +M
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P ++TYT+L+ YCK+ LE A + M + +P TY K
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GKVE+A +++R+M E G P+R +Y L+ L KE + A + M RG D+
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T L+ L + + A F+ ++ LVP+ +T+ L D K G
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 160/359 (44%), Gaps = 24/359 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +I Y + G + A+ + + N + IL+ LC G ++ +
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPN----SITCNILVQRLCAAGEIEKTMDL 493
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ L + PT + +L+ +S+ ++ V ++ TY TL+ +
Sbjct: 494 LNDM--LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CRL + RA + K+M +GI + I YN +I G + ++ + + L P +
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY L+ G A ++ A+ ++ M RG +P+ TTY+ K G +++ + LY +
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G+ P TY++L+ K K+ A ++ +EM+ RG I ++ST I L+C YK
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRG--IPPNSSTYDI-LICGWYK 728
Query: 335 FD---------------EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
EA FE+M +G +P T ++ K G A AQ++ N
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILN 787
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 8/313 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++D K G+ S+ F+ +E+ ++S V YN+L+NG F+ ++E F MR
Sbjct: 373 MMDGFFKAGK---ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMR 428
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ + P+ T+ T++ YC+ + A++L+ EM+ G++PN+I N ++ L AG E
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ ++ LV PT T+ +++ K+ + + ++ G +TYN
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLI 548
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
F + G + A +++ M+ G D +TY+ L+ C L A V +M G
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG-MTALAQK 375
+++T +L+ L EA+ M RGLVP+ T+ L K G M +
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668
Query: 376 LCNVMSS--VPRS 386
C +++ VP++
Sbjct: 669 YCEMITKGFVPKT 681
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+V +N+L++G+ R+ + A M+ E P++VTY TL+ G+C++ + A +L+
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
E+ +EPN I Y T+ID ++ E+ M + V P +VTYT ++ G CK+
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G +E A + + M G +P+ +Y K G V +A L +M+ G D + Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 288 HILLKILCK-------EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
L+ L K ED + ++ S C T + LI C++ ++
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCV-------TYSALIDGHCKLGDVNKGEL 248
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
++M + + P+ + + + D + K+G+
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%)
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + + G++ A+ L M G PD +TY+ L+ CK L A ++ E+
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ ++ T T LI C+ ++A +++M + LVP +T+ + + K G
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 372 LAQKLCNVMSSV 383
A+ + M V
Sbjct: 140 EAKSVFREMEEV 151
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 6/317 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G ++ AI N ++K + + IL+D+L K+G+VK A
Sbjct: 484 TYSTLIYGFCIVGKLKEAIGLL----NEMVLKTINPDVRTYTILVDALGKEGKVKEAKSV 539
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
L P V YN L+NG+ VK A+ + M VTP+V TY L+ G+
Sbjct: 540 LAVM--LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 597
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + VD A+ L KEM ++ + P+ + Y++++DGL ++GR V +++ +
Sbjct: 598 CKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADV 657
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY SL+ G CK G L+ A + M +G P+ T+ K G+++DA +++
Sbjct: 658 ITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQD 717
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ GY D Y++++ CK+ L+ A+ + +M+ GC + T ++I+ L + +
Sbjct: 718 LLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDE 777
Query: 335 FDEASAEFEDMIRRGLV 351
D+A MI RGL+
Sbjct: 778 NDKAEKLLRQMIARGLL 794
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 169/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P V+ +T LI+ G V+ A+ F + L + + F + L++ +CK G
Sbjct: 375 PSTVTLNT---LIKGLCLKGQVKKAL---HFHDKL-LAQGFQLNQVSYATLINGVCKIGD 427
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + RK + P V +Y+ +++ + + V +A + EM + ++ +VVTY
Sbjct: 428 TRGAIKLL--RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 485
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C + ++ AI L+ EM + I P+ Y ++D L + G+ +E ++ L
Sbjct: 486 STLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLK 545
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + TY +L+ GY +++ A + M G P TY F K V++
Sbjct: 546 ACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDE 605
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+NL+++M + PD +TY L+ LCK ++ + EM+ RG D+ T LI
Sbjct: 606 ALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLID 665
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ D+A A F M +G+ P+ TF L D K G AQ++
Sbjct: 666 GLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 714
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 165/334 (49%), Gaps = 12/334 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI+ G V+ A+ F + L + + F + L++ +C+ G
Sbjct: 61 PDTVTLNT---LIKGLCLKGQVKEAL---HFHDKL-LAQGFQLNQVSYATLINGVCRIGD 113
Query: 88 VKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+AA ++ K +D A P V +YN +++ + + V +A + EM + ++ NVVT
Sbjct: 114 TRAAIKFLRK---IDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVT 170
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G+C + ++ A+ L+ M + I PN YN ++D L + G+ +E ++ L
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVML 230
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
++TY++L+ GY +++ A + M G P +YN F K +V+
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+NL+++MI S + P + ++ +L K A+ +S ++ +G DL T +LI
Sbjct: 291 KALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILI 349
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ C M + + +++RG P +T L
Sbjct: 350 NCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTL 383
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 148/316 (46%), Gaps = 2/316 (0%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + + L+ C G++K A ++ + ++ P VR Y IL++ +
Sbjct: 475 VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEM--VLKTINPDVRTYTILVDALGKEGK 532
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
VK+A+ M K V P+V TY TL+ GY + V +A + M G+ P+ Y
Sbjct: 533 VKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 592
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+G ++ +E + + P VTY+SLV G CK+G + ++ M RG
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
TYN K G ++ A+ L+ KM + G P+ T+ ILL LCK +L A
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 712
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V +++ +G +D+ ++I+ C+ +EA M G +P+ +TF + +
Sbjct: 713 EVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Query: 365 KKRGMTALAQKLCNVM 380
K+ A+KL M
Sbjct: 773 FKKDENDKAEKLLRQM 788
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 150/328 (45%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ C G++ K L + + P+ N L+ G VK A F +
Sbjct: 345 LNILINCFCHMGQITFGFSVL--AKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDK 402
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + N V+Y TL+ G C++ AI+L++++ +PN +Y+T+ID L +
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 462
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E G+ V +VTY++L+ G+C G L+ A +L M+ + P TY
Sbjct: 463 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTI 522
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV++A ++ M+++ PD TY+ L+ ++ A V M G
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T T+LI+ C+ DEA F++M ++ +VP +T+ L D K G +
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642
Query: 375 KLCNVM------SSVPRSMELLDSRCKD 396
L + M + V L+D CK+
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKN 670
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 147/327 (44%), Gaps = 9/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+++ CK RV A F KE+ S P + +N +L+ + + K+ A
Sbjct: 276 YNIMINGFCKIKRVDKALNLF---KEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHR 332
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + P++ T L+ +C + ++ ++ ++ K G P+ + NT+I GL G+
Sbjct: 333 LELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 392
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ L V+Y +L+ G CK GD GA K+L+ + R P+ Y+
Sbjct: 393 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYST 452
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K+ V +A L+ +M G + D +TY L+ C KL AI + EM +
Sbjct: 453 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT 512
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND------EFKKRG 368
+ D+ T T+L+ L + K EA + M++ + P T+ L + E KK
Sbjct: 513 INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQ 572
Query: 369 MTALAQKLCNVMSSVPRSMELLDSRCK 395
A L V V L++ CK
Sbjct: 573 HVFNAMSLMGVTPDVHTYTILINGFCK 599
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 1/268 (0%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K L + + P N L+ G VK+A F ++ + N V+Y TL+ G CR+
Sbjct: 53 KILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIG 112
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
AI+ ++++ +PN +YNT+ID L + E G+ V +VTY+
Sbjct: 113 DTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYS 172
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ G+C G L+ A +L +M+ + P+ TYN K GKV++A ++ M+++
Sbjct: 173 TLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKA 232
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
+ +TY L+ ++ A V M G D+ + ++I+ C++ + D+A
Sbjct: 233 CVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKA 292
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
F++MI P + F ++ D F K
Sbjct: 293 LNLFKEMILSRF-PPIIQFNKILDSFAK 319
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 2/227 (0%)
Query: 157 LRRVDRAIRL--VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
++ VD A+ L + ++ K G P+ + NT+I GL G+ +E ++ L
Sbjct: 39 IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y +L+ G C+ GD A K L+ + R P+ YN K+ V +A L+ +
Sbjct: 99 VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G + + +TY L+ C KL A+ + M + + ++ T +L+ LC+ K
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
EA + M++ + + +T+ L D + AQ + N MS
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMS 265
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 179/376 (47%), Gaps = 16/376 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS V+ R ++EA W N + + F + +++D+ C++G
Sbjct: 222 PDCVSFKLMVVACCNMGR--VLEAEKWL-----NAMVERGFIVDNATCTLIIDAFCQKGY 274
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V YF K E+ AP V + L+NG + ++K A EM + PNV T+
Sbjct: 275 VNRVVGYFWKMVEM--GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTH 332
Query: 148 GTLVEGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
TL++G C+ ++A RL +K +R +G +PN Y +I+G + + ++ R
Sbjct: 333 TTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYT+L+ G+CK G+ A +++ +M GF P+ TYN K G ++
Sbjct: 393 EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLD 452
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L K+ G D +TY IL+ + C++ + ++ +M G D+ + T LI
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---V 383
CR + E+ FE+ + GL+P T+ + + + G T+LA KL MS+
Sbjct: 513 SXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCA 572
Query: 384 PRSM---ELLDSRCKD 396
P S+ L+ CK+
Sbjct: 573 PDSITYGALISGLCKE 588
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 172/382 (45%), Gaps = 46/382 (12%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
V T ++I + + G V + F + + N + F L++ LCKQG +K
Sbjct: 256 IVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVIN----FTALINGLCKQGSIK 311
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYG 148
A E + + + W P V + L++G + + A R +L++ R + PNV TY
Sbjct: 312 QAFELLEEM--VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
++ GYC+ +++RA L+ M+++G+ PN Y T+IDG + G F +M+ L+
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMD--LMG 427
Query: 209 EPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ G P + TY +++ G CK G L+ A ++L + G TY +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-------------------------- 300
++ + KM++ G+TPD +Y L+ C++ ++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Query: 301 ---------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LA+++ + M GC D T LI LC+ K D+A ++ M+ +GL
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607
Query: 352 PHYLTFKRLNDEFKKRGMTALA 373
P +T L E+ K+ ++ A
Sbjct: 608 PCEVTRLTLAYEYCKKDDSSTA 629
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 3/317 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
KN + + + ++ + + G++K A + + +Q + + N +L+ V
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQ--NQGLVXSTQTLNCVLDVAVGMGLV 205
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ AE ++EM + V+P+ V++ +V C + RV A + + M + G + +
Sbjct: 206 EIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLI 265
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
ID + G V G + + P ++ +T+L+ G CK G ++ A ++L+ M+ RG+
Sbjct: 266 IDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW 325
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAI 304
P+ T+ K G E A L+ K++ S GY P+ TY ++ CKEDKL+ A
Sbjct: 326 KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAE 385
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ M+ +G + +T T LI C++ F A + M + G P+ T+ + D
Sbjct: 386 MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL 445
Query: 365 KKRGMTALAQKLCNVMS 381
K+G A +L N +S
Sbjct: 446 CKKGSLDEAYRLLNKVS 462
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 9/314 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I Y + + A +V N ++ + L+D CK G A E
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT----YTTLIDGHCKVGNFVRAYEL 422
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + ++P + YN +++G + ++ +A R ++ + + VTY L+ +
Sbjct: 423 MDLMGK--EGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVH 480
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR +R++ +M K G P+ Y T+I + +E + E + PT
Sbjct: 481 CRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTK 540
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYTS++ GYC+ G+ A K+ + M + G P TY K K++DA NLY
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M++ G +P +T L CK+D AI V ++ R + T L+ LC K
Sbjct: 601 MMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGK 657
Query: 335 FDEASAEFEDMIRR 348
D A+ F ++ +
Sbjct: 658 LDMAALFFHKLLDK 671
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVT 216
++ A+ +V EM+ +G+ + N V+D V G E M +C+ G P V+
Sbjct: 169 KLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVE--MCQRGVSPDCVS 226
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+ +V C G + A K L M+ RGF+ T F + G V + + KM+
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
E G P+ + + L+ LCK+ + A ++ +EM RG ++ T T LI LC+ +
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346
Query: 337 EASAEFEDMIRR-GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRS---MEL 389
+A F ++R G P+ T+ + + + K A+ L + M VP + L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406
Query: 390 LDSRCK 395
+D CK
Sbjct: 407 IDGHCK 412
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 207/392 (52%), Gaps = 21/392 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI---WTFE 57
M+ +L + ++FD W +L++ + +S T +++ R A+ V + W F+
Sbjct: 113 MLYILGRNRKFDQIWEILIET--KRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFK 170
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+V +F A F LL +LC++ + A +H L + P ++ +NILL+
Sbjct: 171 -----RLVPDFFDTAC-FNALLRTLCQEKSMTDARNVYH---SLKHQFQPDLQTFNILLS 221
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
GW K+ ++AE F+ EM+ + + P+VVTY +L++ YC+ R +++A +L+ +MR+E P
Sbjct: 222 GW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETP 278
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ I Y T+I GL G+ ++ +++ P + Y + ++ YC A L A K++
Sbjct: 279 DVITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLV 338
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TTYN FFR S + + LY +M+ +G P+ + L+K+ +
Sbjct: 339 DEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRH 398
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+K+D+A+++ ++M +G S +L+ LLC + K +EA +M+ +G P ++F
Sbjct: 399 EKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 458
Query: 358 KRLNDEF----KKRGMTALAQKLCNVMSSVPR 385
KR+ K + L QK+ + +PR
Sbjct: 459 KRIKLLMELANKHDEVNNLIQKMAIFGTEIPR 490
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 146/304 (48%), Gaps = 4/304 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I+L LC+ G V A R+ +S +P + YN L+NG ++K +K+A LE
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLI--REMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLE 58
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PN VT TL++G C+ R+D A+ L++ M+K+G + + ++Y T+I G G
Sbjct: 59 MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + L +VTY+ LV G C+ G + A+ +L M G P TY
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+ AM+L M+E G P +TY++LL LCKE + A ++ + M +G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI--RRGLVPHYLTFKRLNDEFKKRGMTAL 372
D+ T L+ LC K DEA F M L P+ TF L K G
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298
Query: 373 AQKL 376
A K+
Sbjct: 299 AVKI 302
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 4/297 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L++ G V+ A+ F + D + F +L+ LCK+GR+ A +
Sbjct: 245 TYNTLMKGLCDKGKVDEALKLFN--SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
RK + + + YN+LL G ++ +K+A W ++ PN TY L++G+
Sbjct: 303 --HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++R ++ A L EMR G+ P YNT++ L + G E+ + + P +
Sbjct: 361 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 420
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+++ +++ G KAGD + ++ M+ G P T++ SK G++++A + +
Sbjct: 421 ISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALER 480
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M+ SG+TPD L Y LLK L + I + +M +G +D + ++ LC
Sbjct: 481 MVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 175/379 (46%), Gaps = 15/379 (3%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
+L+ + H + PD V T+ LI + G A+ NL + K + +
Sbjct: 160 VLNAMAEHGIHPDVV---TYTGLIDGLCKDGRATHAMDLL----NLMVEKGEEPSNVTYN 212
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM- 135
+LL LCK+G V A + R +++ V YN L+ G V +A + + M
Sbjct: 213 VLLSGLCKEGLVIDAFKIL--RMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270
Query: 136 RKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
EN + PNV T+ L+ G C+ R+ +A+++ ++M K+G N + YN ++ G ++AG+
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + ++ L P TY+ L+ G+CK L A + M + G P+ YN
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 390
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +E A +L+++M + PD ++++ ++ K ++ +M G
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T + LI+ L ++ + DEA + E M+ G P L + L +G T
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT--- 507
Query: 375 KLCNVMSSVPRSMELLDSR 393
++ N++ + +LD +
Sbjct: 508 EIINLLHQMAAKGTVLDRK 526
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+++G CR V A+ L++EM ++ + P+ + YNT+I+GL +A + +E G++
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P VT T+L+ G CK G ++ A ++L+ M +GF Y F G ++
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ G + + +TY L+ LC+ + A V M G D+ T T LI L
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C+ + A M+ +G P +T+ L K G+ A K+ +M
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N V+ GL G E G++ P +V+Y +L+ G CKA L+ A +L M +
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G P+ T K G++++AM L M + G+ D + Y L+ C LD
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
++ EM +G ++ T + L+H LCR+ ++ EA+ M G+ P +T+ L D
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 363 EFKKRGMTALAQKLCNVM 380
K G A L N+M
Sbjct: 182 GLCKDGRATHAMDLLNLM 199
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++KG C+ G + A +++ M + P +YN K K+++A+ L +M +G
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ +T L+ LCK+ ++D A+++ + MK +G D D+ LI C D
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSR 393
F++M+ +G+ + +T+ L + G A + N M+ V L+D
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183
Query: 394 CKD 396
CKD
Sbjct: 184 CKD 186
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 152/302 (50%), Gaps = 4/302 (1%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I+L LC + R + A E H + P V Y+ +++G + + A + EM
Sbjct: 166 IILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREML 225
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ PNVV Y +++ C+ + +D+A+ + M K G+ PN Y +++ G +G+
Sbjct: 226 DRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLT 285
Query: 197 EVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E +E+ +C G P +VTY+S + CK G A KI M+ RG P TTY+
Sbjct: 286 EAIKFLEK--MCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSS 343
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + + L+ M++S PD ++ L+ K+ K+D A+ V +M+ +G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQG 403
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T + LI+ C++ + + A A F++M+ G+ P+++T+ + + G TA A+
Sbjct: 404 LKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAK 463
Query: 375 KL 376
+
Sbjct: 464 EF 465
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 7/286 (2%)
Query: 69 DSGASL-----FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
D G L + ++D L K G A Y R+ LD+ P V +Y+ ++ + +
Sbjct: 190 DGGGCLPNVVSYSTVIDGLLKGGDPDKA--YATYREMLDRRILPNVVIYSSIIAALCKGQ 247
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ A M K VTPN TY +LV G+C ++ AI+ +++M G+EPN + Y+
Sbjct: 248 AMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYS 307
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+ +D L + GR E + + + P + TY+SL+ GY G L + +M+
Sbjct: 308 SFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQS 367
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
P +N +K GKV++AM ++ KM + G P+ +TY L+ CK +++ A
Sbjct: 368 DMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENA 427
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ + +EM G + T +++ L R + A + +I+ G
Sbjct: 428 LALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 123/289 (42%), Gaps = 13/289 (4%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK--ENVTPNVVTYGTLVEGYCRLR 158
L + +R N L R RF R VTP V TYG L+ C
Sbjct: 45 LRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAG 104
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE-----VSGMMERFLVCEPGPT 213
R+D + + K+G I++N ++ GL R ++ + GM E V P
Sbjct: 105 RLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCV----PN 160
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMI--SRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
+ ++T ++KG C + A ++L MM G LP+ +Y+ K G + A
Sbjct: 161 VFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYAT 220
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
YR+M++ P+ + Y ++ LCK +D A++V M G + T T L+H C
Sbjct: 221 YREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCS 280
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ EA E M G+ P+ +T+ D K G A+K+ + M
Sbjct: 281 SGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSM 329
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 12/342 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ +L+ + +G +E A + DM++ + ++ L+ C++G+++ AS
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQ-----DMLRLGLEVSVYTYDPLIRGYCEKGQIEEASR 293
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ L + PTV YN ++ G + V DA + M +N+ P++V+Y TL+ G
Sbjct: 294 L--GEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYG 351
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y RL + A L E+R + P+ + YNT+IDGL G + + + + P P
Sbjct: 352 YTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPD 411
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS--KFGKVEDAMNL 271
+ T+T+ V+G+CK G+L A ++ M++RG P + Y R K G A +
Sbjct: 412 VFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL--QPDRFAYITRIVGELKLGDPSKAFGM 469
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+M+ G+ PD +TY++ + L K L A ++ K+M G D T T +IH
Sbjct: 470 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+A A F +M+ +G+ P +T+ L + RG LA
Sbjct: 530 AGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLA 571
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 177/364 (48%), Gaps = 17/364 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL------------LDKIGGHEVPDFVSKDTFVILIRRYARAGM 48
++ +LA+ SA+C++ +D + EV K +L+ Y + +
Sbjct: 87 ILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSL 146
Query: 49 VEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT 108
+E + F + ++ + + + +L D + + A E ++ E PT
Sbjct: 147 LEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRD---RDNNIDVAREVYNVMVEC--GICPT 201
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V YN +L+ + + V++A + +M+ +PN VTY LV G +++A L++
Sbjct: 202 VVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQ 261
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M + G+E + Y+ +I G E G+ EE S + E L PT+VTY +++ G CK G
Sbjct: 262 DMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWG 321
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A K+L +M+++ +P +YN +++ G + +A L+ ++ P +TY+
Sbjct: 322 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYN 381
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ LC+ LD+A+++ EM G D D+ T T + C+M A F++M+ R
Sbjct: 382 TLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNR 441
Query: 349 GLVP 352
GL P
Sbjct: 442 GLQP 445
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 9/356 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS +T LI Y R G + A F ++ + L+D LC+ G
Sbjct: 339 MPDLVSYNT---LIYGYTRLGNIGEAFLLFAELR----YRSLAPSVVTYNTLIDGLCRLG 391
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A K + + P V + + G+ + N+ A+ + EM + P+
Sbjct: 392 DLDVAMRL--KDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFA 449
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T + G +L +A + +EM G P+ I YN IDGL + G +E S ++++ L
Sbjct: 450 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 509
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P VTYTS++ + AG L A + M+S+G PS TY ++ G+++
Sbjct: 510 YNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 569
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ + +M E G P+ +TY+ L+ LCK K+D A EM+ +G + T T+LI
Sbjct: 570 LAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILI 629
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ C + + EA ++DM+ R + P T + L K + + L NV+++
Sbjct: 630 NENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIAA 685
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 183/403 (45%), Gaps = 54/403 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ L+ + E + A L+ D + G EV + T+ LIR Y G +E A E
Sbjct: 243 LVNGLSHSGEMEQAKELIQDMLRLGLEVSVY----TYDPLIRGYCEKGQIEEASRLGEEM 298
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD----QSWAPTVRVYNIL 115
+ V + + ++ LCK GRV A RK LD ++ P + YN L
Sbjct: 299 LSRGAVPTVVT----YNTIMYGLCKWGRVSDA------RKLLDVMVNKNLMPDLVSYNTL 348
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ G+ R N+ +A + E+R ++ P+VVTY TL++G CRL +D A+RL EM K G
Sbjct: 349 IYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGP 408
Query: 176 EPNAIVYNTVIDGLVEAG--------------------RFEEVS---------------G 200
+P+ + T + G + G RF ++ G
Sbjct: 409 DPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 468
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
M E L P ++TY + G K G+L+ AS+++K M+ G +P TY
Sbjct: 469 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 528
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
G + A L+ +M+ G P +TY +L+ +L LAI EM +G ++
Sbjct: 529 MAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 588
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
T LI+ LC++ K D+A F +M +G+ P+ T+ L +E
Sbjct: 589 TYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINE 631
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 133/260 (51%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R N+ A + M + + P VVTY T+++ +C+ V A++L+ +M+ G PN +
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +++GL +G E+ +++ L ++ TY L++GYC+ G +E AS++ + M
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+SRG +P+ TYN K+G+V DA L M+ PD ++Y+ L+ + +
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + E++ R + T LI LCR+ D A ++MI+ G P TF
Sbjct: 359 GEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418
Query: 361 NDEFKKRGMTALAQKLCNVM 380
F K G +A++L + M
Sbjct: 419 VRGFCKMGNLPMAKELFDEM 438
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC--EPGPTMVTYTS--------- 219
R+ G + + I Y+ ++D L G +ME+ + E G V +S
Sbjct: 73 RQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKL 132
Query: 220 ----LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF-SKFGKVEDAMNLYRK 274
L+ Y K LE + M+S+G LP N R + ++ A +Y
Sbjct: 133 ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNV 192
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E G P +TY+ +L CK+ + A+Q+ +M+ GC + T +L++ L +
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++A +DM+R GL T+ L + ++G A +L M S
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLS 300
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 176/357 (49%), Gaps = 13/357 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQ 85
PD T+ L++ YA G + E LD MV+N +F IL+ + KQ
Sbjct: 334 PDIA---TYCTLLQGYATKGAL------VEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+V A F K ++ P V Y ++ +S +V DA ++ +M E +TPN++
Sbjct: 385 EKVDEAMLVFSKMRQ--HGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y +L+ C + D+A L+ EM GI N I +N++I + GR E + +
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++TY++L+ GYC AG ++ A+K+L M S G P TYN + + ++
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA+ L+++M+ SG +P+ +TY+I+L+ L + A ++ + G ++L T ++
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+H LC+ DEA F+++ L TF + K G A+ L +S+
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 679
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 145/285 (50%), Gaps = 1/285 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
ILL LC + R + A E H + AP V Y ++NG+F+ + A + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
++P+VVTY +++ C+ + +D+A+ ++ M K G+ PN + YN+++ G + +
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E G +++ P +VTY SL+ CK G A KI M RG P TY
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ ++ G + + L M+ +G PD ++IL+ K++K+D A+ V +M+ G
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ ++ T +I +LC+ D+A FE MI GL P+ + + L
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 154/306 (50%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ K+G A +H+ LD+ +P V Y+ ++ + + + A
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEM--LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTT 256
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V PN +TY +++ GYC + AI +K+MR +G+EP+ + YN+++D L + GR
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY +L++GY G L +L +M+ G P +N
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K KV++AM ++ KM + G P+ +TY ++ ILCK +D A+ ++M G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LIH LC K+D+A +M+ RG+ + + F + K G ++
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496
Query: 375 KLCNVM 380
KL ++M
Sbjct: 497 KLFDLM 502
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ V+ A+ F + N + ++ IL CK G V A YF
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL----CKSGSVDDAMLYF 429
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ P + VY L++ AE LEM + N + + +++ +C
Sbjct: 430 EQM--IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHC 487
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++PN I Y+T+IDG AG+ +E + ++ P V
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC+ ++ A + K M+S G P+ TYN + + A LY +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+SG + TY+I+L LCK + D A+++ + + ++ T ++I L ++ +
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA F + GLVP T+ + + ++G
Sbjct: 668 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 168/367 (45%), Gaps = 9/367 (2%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++ D GG PD VS + +I + + G + A T+ LD + +
Sbjct: 183 MMADDRGGGSAPDVVS---YTTVINGFFKEGDSDKAYSTYH--EMLD--RRISPDVVTYS 235
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ +LCK + A E + P YN +L+G+ S+ K+A F +MR
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTM--VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V P+VVTY +L++ C+ R A ++ M K G+EP+ Y T++ G G
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E+ +++ + P + L+ Y K ++ A + M G P+ TY
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G V+DAM + +MI+ G TP+ + Y L+ LC DK D A ++ EM RG
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +IH C+ + E+ F+ M+R G+ P+ +T+ L D + G A KL
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 377 CNVMSSV 383
+ M SV
Sbjct: 534 LSSMFSV 540
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 6/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ C+ GR+ + + + + + LL G K DA L
Sbjct: 90 YGILIGCCCRAGRLDLG--FAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147
Query: 135 -MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM---RKEGIEPNAIVYNTVIDGLV 190
M + + P+V + L++G C R A+ L+ M R G P+ + Y TVI+G
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G ++ L P +VTY+S++ CK ++ A ++L M+ G +P+
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN + + ++A+ +KM G PD +TY+ L+ LCK + A ++ M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
RG + D+ T L+ E A + M+R G+ P + F L + K+
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 39/280 (13%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VTP V TYG L+ CR R+D + + K+G AI + ++ GL R +
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 200 GMMERF---LVCEP------------------------------------GPTMVTYTSL 220
++ R L C P P +V+YT++
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G+ K GD + A M+ R P TY+ K ++ AM + M+++G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ +TY+ +L C ++ AI K+M+ G + D+ T L+ LC+ + EA
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ P YN L+NG+ R + DA + E
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSM--FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+PN++TY +++G RR A L + K G + YN ++ GL +
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G + A + + + G +P TY+
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G T + R+ I+ K+L + D
Sbjct: 692 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 736
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 37/340 (10%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A+ F L+ LC +G++ A F K + + + P V Y L+NG + + V +A
Sbjct: 115 ATTFTTLIRGLCVEGKIGEALHLFDKM--IGEGFQPNVVTYGTLINGLCKDRQVTEAFNI 172
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM + ++PN+VTY +L+ G C+L L+ EM I P+ NTV+D L +
Sbjct: 173 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 232
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG------- 244
G E +++ + P +VTY +L+ G+C +++ A K+ M+ +
Sbjct: 233 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 292
Query: 245 ----------------------------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
P+ TYN G+++DA++L+ +M+
Sbjct: 293 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 352
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G PD +TY L LCK LD A+ + K ++ D D+ T ++ +CR + +
Sbjct: 353 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 412
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+A F ++ +GL P+ T+ + K+G+ A A KL
Sbjct: 413 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I+++SLC RV A K +L P + L+ G + +A + +
Sbjct: 83 LAIVINSLCHLNRVDFAFSALAKILKLGHQ--PDATTFTTLIRGLCVEGKIGEALHLFDK 140
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E PNVVTYGTL+ G C+ R+V A + EM +GI PN + YN++I GL +
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ V+ +M + + P + T ++V CK G + A ++ MMI RG P+ TYN
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+V+ A+ ++ M+ + ++Y+ L+ CK +D A+ + +EM +
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ T LIH LC + + +A + F +M+ RG +P +T++ L+D K
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 373
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 13/331 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E+ L+ + + +PD + +T V + GMV A +
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV---DALCKEGMVAEA------HD 241
Query: 61 NLDMV--KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+DM+ + + + L+D C + V A + F D V YN L+NG
Sbjct: 242 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD--CVANVISYNTLING 299
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + ++V A + EM ++ +TPN VTY TL+ G C + R+ AI L EM G P+
Sbjct: 300 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 359
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y T+ D L + ++ +++ P + YT+++ G C+AG+LE A +
Sbjct: 360 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 419
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ S+G P+ TYN K G + +A L+ +M ++G +P+ TY+++ + + +
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ I++ +EM RG +D+ T+T+L+ +L
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGML 510
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 130/278 (46%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K + + +P + YN L++ K EM + PNVV + T+V+ C+
Sbjct: 663 KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+ A +V M K G+EP+ + Y ++DG +E + + + P + +Y
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L+ GYC+ ++ A +L+ M +G + TYN G+++ A+ L+ +M+ S
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY ILL LCK L A+ + K ++ D D+ + I +CR + + A
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F ++ +GL P T+ + KRG+ A KL
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKL 940
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 161/377 (42%), Gaps = 47/377 (12%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF LIR G + A+ F+ M+ + F + L++ L
Sbjct: 110 GHQ-PD---ATTFTTLIRGLCVEGKIGEALHLFD-----KMIGEGFQPNVVTYGTLINGL 160
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG------W----------------- 119
CK +V A F + + + +P + YN L++G W
Sbjct: 161 CKDRQVTEAFNIF--SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 218
Query: 120 --FRSKNVKDA---ERFWLE-------MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
F V DA E E M V PNVVTY L++G+C VD A+++
Sbjct: 219 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 278
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
M + N I YNT+I+G + ++ + E E P VTY +L+ G C
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G L+ A + M++RG +P TY Y K ++ AM L + + S + PD Y
Sbjct: 339 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 398
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+L +C+ +L+ A + + +G ++ T ++IH LC+ EAS F +M +
Sbjct: 399 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 458
Query: 348 RGLVPHYLTFKRLNDEF 364
G P+ T+ + F
Sbjct: 459 NGCSPNDCTYNLITRGF 475
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 17/303 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F LL S+ K +K S ++D P V NIL+N + + + A
Sbjct: 584 FTKLLTSIAK---MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLA 640
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++ K P+VVTYGTL+ G C+ M +GI P+ YN++I L
Sbjct: 641 KLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLC 687
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ V+ ++ + + P +V ++++V CK G + A ++ MMI RG P TY
Sbjct: 688 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYT 747
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
++++A+ ++ M+ G P+ +Y+IL+ C+ ++D A+ + ++M +
Sbjct: 748 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 807
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D T LIH LC + + A A F +M+ G +P +T++ L D K A A
Sbjct: 808 GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEA 867
Query: 374 QKL 376
L
Sbjct: 868 MVL 870
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 4/287 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F LL S+ K K S +++D P V I++N V A
Sbjct: 48 FNRLLTSIAK---TKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALA 104
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++ K P+ T+ TL+ G C ++ A+ L +M EG +PN + Y T+I+GL +
Sbjct: 105 KILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDR 164
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E + + P +VTY SL+ G CK + + + ++ M+ +P T N
Sbjct: 165 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 224
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G V +A ++ MI G P+ +TY+ L+ C +++D+A++V M +
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C ++ + LI+ C++ D+A FE+M R+ L P+ +T+ L
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 331
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F ++D+LCK+G + A + + + P V Y L++G + +A + +
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMM--IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 767
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + PNV +Y L+ GYC+++R+D+A+ L+++M +G+ + + YNT+I GL G
Sbjct: 768 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 827
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + + + P +VTY L+ CK L A +LK + YN
Sbjct: 828 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 887
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+ G++E A +L+ + G PD TY+I++ LCK LD A ++ ++M
Sbjct: 888 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 167/448 (37%), Gaps = 78/448 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A L + + ++PD V+ T + + A + E +N
Sbjct: 331 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 390
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+D ++ +LD +C+ G ++ A + F + P V YNI+++G
Sbjct: 391 -------WDPDIQIYTTILDGMCRAGELEDARDLFSNLSS--KGLQPNVWTYNIMIHGLC 441
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A + + EM K +PN TY + G+ R R I L++EM G +
Sbjct: 442 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 501
Query: 181 VYNTVIDGLVEAGRFEEVSGMM-------------------------------------- 202
++ L + G + V ++
Sbjct: 502 TTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNT 561
Query: 203 --------ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
R L P P+ V +T L+ K + M S G P T N
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F ++ A ++ K+++ G+ PD +TY L+ LCK M +G
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKG 668
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T LIH LC + ++ + +M+ ++P+ + F + D K GM A+A
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728
Query: 375 KLCNVMSSVPRSME--------LLDSRC 394
+ ++M + R +E L+D C
Sbjct: 729 DVVDMM--IKRGVEPDVVTYTALMDGHC 754
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 141/327 (43%), Gaps = 26/327 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L E+ LL + + +P+ V F ++ + GM+ A +
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVV---VFSTVVDALCKEGMIAIA------HD 729
Query: 61 NLDMV--KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+DM+ + + + L+D C + + A + F + + P VR YNIL+NG
Sbjct: 730 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM--VHKGCVPNVRSYNILING 787
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + + + A +M + + + VTY TL+ G C + R+ AI L EM G P+
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y ++D L + E +++ ++ Y + G C+AG+LE A +
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 907
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE----SGYTPDR----LTYHIL 290
+ S+G P TYN K G +++A L+RKM E S T R L Y
Sbjct: 908 NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQ-- 965
Query: 291 LKILCKEDKLDLAIQV--SKEMKCRGC 315
KI+ E L +I V K C GC
Sbjct: 966 -KIMLPEIDLVYSISVMFEKMFICHGC 991
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ V + L+ + + + L ++M GI P+ VI+ L R
Sbjct: 36 MLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNR 95
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + L P T+T+L++G C G + A + MI GF P+ TY
Sbjct: 96 VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 155
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K +V +A N++ +MI G +P+ +TY+ L+ LCK + + EM
Sbjct: 156 LINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 215
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T ++ LC+ EA + MI RG+ P+ +T+ L D R +A
Sbjct: 216 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 275
Query: 375 KLCNVM 380
K+ + M
Sbjct: 276 KVFDTM 281
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 16/250 (6%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGP 212
+D A+ M + P+ + +N ++ + + +S M+ F + P
Sbjct: 22 HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGI---PP 78
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ T ++ C ++ A L ++ G P TT+ R GK+ +A++L+
Sbjct: 79 DVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 138
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
KMI G+ P+ +TY L+ LCK+ ++ A + EM +G ++ T LIH LC++
Sbjct: 139 DKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 198
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME---- 388
++ + +M+ ++P T + D K GM A A + ++M + R +E
Sbjct: 199 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM--IHRGVEPNVV 256
Query: 389 ----LLDSRC 394
L+D C
Sbjct: 257 TYNALMDGHC 266
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+NT + +E R L +P P+ V + L+ K + + M
Sbjct: 13 HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 72
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S G P T +V+ A + K+++ G+ PD T+ L++ LC E K+
Sbjct: 73 SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 132
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + +M G ++ T LI+ LC+ + EA F +MI +G+ P+ +T+ L
Sbjct: 133 EALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 192
Query: 362 DEFKK----RGMTALAQKLCN--VMSSVPRSMELLDSRCKD 396
K + +T L ++ + +M V ++D+ CK+
Sbjct: 193 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 233
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 168/310 (54%), Gaps = 16/310 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I++L +A + + A C+LLD G E +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEW----DEDMWVLMIDSYGKAGIVQESVKLFQKM 106
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L + + S +LF+++L ++GR A YF+K L + PT +N+++ G+
Sbjct: 107 EELGVERTTKSYDTLFKVIL----RRGRFMMAKRYFNKM--LSEGIEPTRHTFNVMIWGF 160
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F S V+ A RF+ +M+ ++P+V+TY T++ GY R++++D A + EM+ IEP
Sbjct: 161 FLSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTV 220
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y T+I G V + ++ ++E P +TY++L+ G C A + A +LK
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKE 280
Query: 240 MISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M+ + +PT + F R S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 281 MVDKYI--APTDNSIFMRLISGQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCK 338
Query: 297 EDKLDLAIQV 306
D+ D A+++
Sbjct: 339 ADQHDKAVKL 348
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + ++ V+++ + + +M + V +Y TL + R R A R +M E
Sbjct: 85 LMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + + E P ++TY +++ GY + ++ A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
LC +K+ A V KEM + D LI C+ D A+ + MIR
Sbjct: 265 LCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAMIR 319
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+T+ ++ GRF + L PT T+ ++ G+ +G +E A++ M
Sbjct: 117 SYDTLFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+++A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAP 288
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ D A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMDEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++G
Sbjct: 248 GYGIKPN----AITYSTLLPGLCNAEKMSEARSVL--KEMVDKYIAPTDNSIFMRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +LV+G+ + G
Sbjct: 362 QSTLHMEPSA--YNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALN--TLVRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKXALDSMIENDHLPDSSLFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K+D A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S M L+ +CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCK 303
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F+ + W P+V +N L+NG+ R ++ + R
Sbjct: 127 FFNILMHRFCKEGDIRVAQSVFNAITK----WGLRPSVVSFNTLMNGYIRLGDLDEGFRL 182
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 183 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 242
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 243 SGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 302
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MI+ D + Y L+ LC+E + A +V +EM
Sbjct: 303 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREML 362
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ S ++M R G VP +T+ L
Sbjct: 363 SAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 411
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E ++ K K ++
Sbjct: 58 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMM----KLKYFKLVWGFY 113
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV++ TL+ GY
Sbjct: 114 EEI--LECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 231
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK+G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE L+ A + K M +D T LI LC+ ++
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRY 351
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 352 LDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 114/217 (52%), Gaps = 2/217 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A+E F + LD+ P + L++G +S V A + +
Sbjct: 198 YSVLINGLCKESKMDDANELFDEM--LDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQ 255
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++++P+++TY TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G
Sbjct: 256 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGD 315
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E +R + V YT+L+ G C+ G A K+L+ M+S G P TY
Sbjct: 316 LETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTM 375
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
F K G V L ++M G+ P +TY++L+
Sbjct: 376 IINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 263 PDLITYNT---LIYGLCKKGDLKQA---HDLIDEMSM-KGLKPDKITYTTLIDGCCKEGD 315
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A E H+++ + ++ Y L++G + DAE+ EM + P+ TY
Sbjct: 316 LETAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTY 373
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++ +C+ V +L+KEM+++G P+ + YN +++G
Sbjct: 374 TMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 169/359 (47%), Gaps = 9/359 (2%)
Query: 9 KEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNF 68
K+F S+ +L + H+ + V+ L+ YA++ M + AI FE L VK
Sbjct: 103 KDFLSSPSVLSTLVRTHDNQE-VNSQVLSWLVIHYAKSKMTQDAIQVFE-QMRLHEVKPH 160
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+ +LL+SL K G + + ++ + P + +YN L + +S +V+ A
Sbjct: 161 LHACT---VLLNSLLKDGVTHMVWKIY--KRMVQVGVVPNIYIYNCLFHACSKSGDVERA 215
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
E+ EM + V ++ TY TL+ YC+ A+ + M +EGI + + YN++I G
Sbjct: 216 EQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYG 275
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
+ GR E M + P VTYT+L+ GYCK +LE A K+ K+M ++G P
Sbjct: 276 FCKEGRMREAMRMFSE--IKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPG 333
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN R + G++ DA L +M E D +T + L+ CK L A++
Sbjct: 334 VVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKN 393
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+M G D T LIH C+ + + A M+ G P Y T+ + D + K+
Sbjct: 394 KMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKK 452
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YN L+ G+ + +++A R + E++ N TPN VTY TL++GYC+ ++ A+++ K M
Sbjct: 269 YNSLIYGFCKEGRMREAMRMFSEIK--NATPNHVTYTTLIDGYCKTNELEEALKMCKLME 326
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+G+ P + YN+++ L + GR + + ++ + +T +L+ YCK GDL+
Sbjct: 327 AKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLK 386
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A K M+ G P P TY F K ++E A L M+++G+TP TY ++
Sbjct: 387 SALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIV 446
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
K+D +D + + E RG +D+ LI C++ + A F M +G+
Sbjct: 447 DGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGIS 506
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ + + + G + A + M+
Sbjct: 507 GESVIYTSIAYAYWNVGNVSAASSMLEEMA 536
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 149/324 (45%), Gaps = 22/324 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFAN-------NLDMVKNFDSGASLFEILLDSLCKQGR 87
T+ L+ Y + GM A+ N NLD+V + L+ CK+GR
Sbjct: 233 TYNTLLSLYCKKGMHYEAL---SIQNRMEREGINLDIVS--------YNSLIYGFCKEGR 281
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A F + K P Y L++G+ ++ +++A + M + + P VVTY
Sbjct: 282 MREAMRMFSEIKNA----TPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTY 337
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+++ C+ R+ A +L+ EM + ++ + I NT+I+ + G + + L
Sbjct: 338 NSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLE 397
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P TY +L+ G+CK +LE A +++ M+ GF PS TY++ ++K ++
Sbjct: 398 AGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDA 457
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
+ L + + G D Y L++ CK +++ A ++ M+ +G + T + +
Sbjct: 458 VLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAY 517
Query: 328 LLCRMYKFDEASAEFEDMIRRGLV 351
+ AS+ E+M RR L+
Sbjct: 518 AYWNVGNVSAASSMLEEMARRRLM 541
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 4/180 (2%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
LV Y K+ + A ++ + M P K G +Y++M++ G
Sbjct: 132 LVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVG 191
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ Y+ L K ++ A Q+ EM +G D+ T L+ L C+ EA
Sbjct: 192 VVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEAL 251
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL-CNVMSSVPRSM---ELLDSRCK 395
+ M R G+ +++ L F K G A ++ + ++ P + L+D CK
Sbjct: 252 SIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHVTYTTLIDGYCK 311
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 160/334 (47%), Gaps = 37/334 (11%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ LCK G ++ A + F + + P ++ YN L+ G+++ +N++ A +E++K
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMM--GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKK 435
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
EN+T N G +V G C + RA L +EM G++PN ++Y T++ GLV+ GRFEE
Sbjct: 436 ENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEE 495
Query: 198 ---VSGMMER--------------FLVCEPG------------------PTMVTYTSLVK 222
+ G+M+ C+ G P + TY + +
Sbjct: 496 AIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIH 555
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
GYC+AG+++ A + M+ G P+ + K G A +R M++ G P
Sbjct: 556 GYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLP 615
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D T+ +L+ L K KL A+ V E+ +G D+ T T LI LC+ A
Sbjct: 616 DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELH 675
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+DM ++G+ P+ +T+ L + K G A A++L
Sbjct: 676 DDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 7/345 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI Y + G + A+ F A F G + L L K RV+ ++
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAK----TNEFIVGLACCNSLSKDLLKGNRVEL---FW 218
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
K + + P V Y L+N + R V++ + +M ++ PN+VTY ++ G C
Sbjct: 219 KVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLC 278
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R VD A+ L + M +G+ P+ +Y T+IDG R E M++ P V
Sbjct: 279 RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV 338
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
YT+L+ G+ K D+ GA ++ + M +R + TY K G +E A +L+ +M
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM 398
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD TY+ L++ K ++ A ++ E+K + +++ LC
Sbjct: 399 TMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDL 458
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A+ F++MI GL P+ + + + K G A K+ VM
Sbjct: 459 TRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM 503
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 3/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ CK G+++ Y + + + P V Y ++G+ R+ ++ AER ++E
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEM--IAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN V L++GYC+ +A + M +G+ P+ ++ +I GL + G+
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G+ L P + TYTSL+ CK GDL+ A ++ M +G P+ TYN
Sbjct: 633 LQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNA 692
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G++ A L+ + E G + +TY ++ CK L A Q+ MK G
Sbjct: 693 LINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVG 752
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D LI C+ ++A + F M+ G + F L D F K G A
Sbjct: 753 VPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAY 811
Query: 375 KL 376
+L
Sbjct: 812 QL 813
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 179/386 (46%), Gaps = 13/386 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K + A + + + VPD T+ LI + G ++AA FE +
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVF---TYTSLISNLCKEGDLKAA---FELHD 676
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ K + + L++ LCK G + A E F E + A Y+ ++ G+
Sbjct: 677 DM-CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPE--KGLARNSVTYSTIIAGYC 733
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S N+ +A + + M+ V P+ Y L++G C+ ++A+ L M +EGI
Sbjct: 734 KSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP- 792
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N +IDG + G+ E ++E + P VTYT L++ +C G+++ A ++ M
Sbjct: 793 AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEM 852
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
R +P+ TY +++ G+ + +L+ +M+ G PD L + +++ KE
Sbjct: 853 QKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNW 912
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A+++ +M G ++ + T+LI LC+ E +++ ++G T L
Sbjct: 913 IKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTL 972
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRS 386
F + G T A + V+ S+ RS
Sbjct: 973 VCCFHRAGRTDEALR---VLESMVRS 995
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 158/305 (51%), Gaps = 3/305 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ CK G+ S YF + +++ + P V + L+ G+F KN++ A R +E+ +
Sbjct: 74 LLNRSCKAGKFNE-SLYFLECL-VNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILE 130
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ P+V Y ++ G+C++ R++ A +++ M+ G P+ + YN +I L +
Sbjct: 131 SHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL 190
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++++ L+ PT++TYT L++ G + A K+L+ M++RG LP TYN R
Sbjct: 191 ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 250
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G VE A L + G PD ++Y+ILL+ + K D ++ EM RGC+
Sbjct: 251 GMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T ++LI LCR + DEA + + MI + L P ++ L K G LA +
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370
Query: 378 NVMSS 382
+ M S
Sbjct: 371 DYMIS 375
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 158/348 (45%), Gaps = 6/348 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI G + A+ E + + + ++ +CK+G V+ A+E
Sbjct: 209 TYTILIEATIVEGGINEAMKLLEEM----LARGLLPDMYTYNAIIRGMCKEGMVERAAEL 264
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P V YNILL + + E+ EM PN VTY L+
Sbjct: 265 ITSLTS--KGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR R+D AI ++K M ++ + P+ Y+ +I L + GR + G+M+ + P +
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V Y +++ CK G+ A +I + G P+ ++YN G A+ +
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G PD +TY+ L+ LC++ ++ AI + +M+ G + + +++ LC++ +
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
D+A F +MI +G P+ T+ L + G A +L N + S
Sbjct: 503 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 550
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 154/340 (45%), Gaps = 7/340 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L+ R +AG +++ E N K + L L+ ++ AS
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVN----KGYTPDVILCTKLIKGFFNFKNIEKASRVMEI- 128
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
L+ P V YN +++G+ + ++ A + M+ P++VTY ++ C R
Sbjct: 129 --LESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
++ A++++ ++ + P I Y +I+ + G E ++E L P M TY
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++++G CK G +E A++++ + S+G P +YN R F GK ++ L +M
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+++TY IL+ LC+ ++D AI V K M + D + LI LC+ + D A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ MI G +P + + + K G A ++ N
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 406
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 17/278 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + D A +L I PD S D LI + G ++ AI ++
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP---LISALCKEGRLDLAIGIMDYMI 374
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + + + +L +LCK G A E F+K + + P V YN +++ +
Sbjct: 375 SNGCLPDIVN----YNTILAALCKNGNANQALEIFNKLRGM--GCPPNVSSYNTMISALW 428
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ A M + V P+ +TY +L+ CR V+ AI L+ +M + G P I
Sbjct: 429 SCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 488
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN V+ GL + R ++ GM + P TY L++G AG A ++ +
Sbjct: 489 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SR + + F + K +++Y+++ S
Sbjct: 549 FSRDVISQDS--------FKRLNKTFPMLDVYKELSNS 578
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 179/376 (47%), Gaps = 16/376 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS V+ R ++EA W N + + F + +++D+ C++G
Sbjct: 222 PDCVSFKLMVVACCNMGR--VLEAERWL-----NAMVERGFIVDNATCTLIIDAFCQKGY 274
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V YF K E+ AP V + L+NG + ++K A EM + PNV T+
Sbjct: 275 VNRVVGYFWKMVEM--GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTH 332
Query: 148 GTLVEGYCRLRRVDRAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
TL++G C+ ++A RL +K +R +G +PN Y +I+G + + ++ R
Sbjct: 333 TTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P TYT+L+ G+CK G+ A +++ +M GF P+ TYN K G ++
Sbjct: 393 EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLD 452
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A L K+ G D +TY IL+ + C++ + ++ +M G D+ + T LI
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---V 383
CR + E+ FE+ + GL+P T+ + + + G T+LA KL MS+
Sbjct: 513 STFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCA 572
Query: 384 PRSM---ELLDSRCKD 396
P S+ L+ CK+
Sbjct: 573 PDSITYGALISGLCKE 588
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 172/382 (45%), Gaps = 46/382 (12%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
V T ++I + + G V + F + + N + F L++ LCKQG +K
Sbjct: 256 IVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVIN----FTALINGLCKQGSIK 311
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYG 148
A E + + + W P V + L++G + + A R +L++ R + PNV TY
Sbjct: 312 QAFELLEEM--VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
++ GYC+ +++RA L+ M+++G+ PN Y T+IDG + G F +M+ L+
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMD--LMG 427
Query: 209 EPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ G P + TY +++ G CK G L+ A ++L + G TY +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-------------------------- 300
++ + KM++ G+TPD +Y L+ C++ ++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Query: 301 ---------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LA+++ + M GC D T LI LC+ K D+A ++ M+ +GL
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607
Query: 352 PHYLTFKRLNDEFKKRGMTALA 373
P +T L E+ K+ ++ A
Sbjct: 608 PCEVTRLTLAYEYCKKDDSSTA 629
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 152/317 (47%), Gaps = 3/317 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
KN + + + ++ + + G++K A + + +Q P+ + N +L+ V
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQ--NQGLVPSTQTLNCVLDVAVGMGLV 205
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ AE ++EM + V+P+ V++ +V C + RV A R + M + G + +
Sbjct: 206 EIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLI 265
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
ID + G V G + + P ++ +T+L+ G CK G ++ A ++L+ M+ RG+
Sbjct: 266 IDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW 325
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAI 304
P+ T+ K G E A L+ K++ S GY P+ TY ++ CKEDKL+ A
Sbjct: 326 KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAE 385
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ M+ +G + +T T LI C++ F A + M + G P+ T+ + D
Sbjct: 386 MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL 445
Query: 365 KKRGMTALAQKLCNVMS 381
K+G A +L N +S
Sbjct: 446 CKKGSLDEAYRLLNKVS 462
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 9/314 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I Y + + A +V N ++ + L+D CK G A E
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT----YTTLIDGHCKVGNFVRAYEL 422
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + ++P + YN +++G + ++ +A R ++ + + VTY L+ +
Sbjct: 423 MDLMGK--EGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVH 480
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR +R++ +M K G P+ Y T+I + +E + E + PT
Sbjct: 481 CRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTK 540
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYTS++ GYC+ G+ A K+ + M + G P TY K K++DA NLY
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M++ G +P +T L CK+D AI V ++ R + T L+ LC K
Sbjct: 601 MMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGK 657
Query: 335 FDEASAEFEDMIRR 348
D A+ F ++ +
Sbjct: 658 LDMAALFFHKLLDK 671
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 11/246 (4%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVT 216
++ A+ +V EM+ +G+ P+ N V+D V G E M +C+ G P V+
Sbjct: 169 KLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVE--MCQRGVSPDCVS 226
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+ +V C G + A + L M+ RGF+ T F + G V + + KM+
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
E G P+ + + L+ LCK+ + A ++ +EM RG ++ T T LI LC+ +
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346
Query: 337 EASAEFEDMIRR-GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRS---MEL 389
+A F ++R G P+ T+ + + + K A+ L + M VP + L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406
Query: 390 LDSRCK 395
+D CK
Sbjct: 407 IDGHCK 412
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 13/357 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQ 85
PD T+ L++ YA G + E LD MV+N +F IL+ + KQ
Sbjct: 334 PDIA---TYCTLLQGYATKGAL------VEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+V A F K ++ P V Y ++ +S +V DA ++ +M E +TPN++
Sbjct: 385 EKVDEAMLVFSKMRQ--HGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y +L+ C + D+A L+ EM GI N I +N++I + GR E + +
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P ++TY++L+ GYC AG ++ A+K+L M S G P TYN + + ++
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA+ L+++M+ SG +P+ +TY+I+L+ L + A ++ + G ++L T ++
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+H LC+ DEA F+++ L TF + K G A+ L SS
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSS 679
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 145/285 (50%), Gaps = 1/285 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
ILL LC + R + A E H + AP V Y ++NG+F+ + A + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
++P+VVTY +++ C+ + +D+A+ ++ M K G+ PN + YN+++ G + +
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E G +++ P +VTY SL+ CK G A KI M RG P TY
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ ++ G + + L M+ +G PD ++IL+ K++K+D A+ V +M+ G
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ ++ T +I +LC+ D+A FE MI GL P+ + + L
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 154/306 (50%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ K+G A +H+ LD+ +P V Y+ ++ + + + A
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEM--LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTT 256
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V PN +TY +++ GYC + AI +K+MR +G+EP+ + YN+++D L + GR
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY +L++GY G L +L +M+ G P +N
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K KV++AM ++ KM + G P+ +TY ++ ILCK +D A+ ++M G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LIH LC K+D+A +M+ RG+ + + F + K G ++
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496
Query: 375 KLCNVM 380
KL ++M
Sbjct: 497 KLFDLM 502
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 160/334 (47%), Gaps = 6/334 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ V+ A+ F + N + ++ IL CK G V A YF
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL----CKSGSVDDAMLYF 429
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ P + VY L++ AE LEM + N + + +++ +C
Sbjct: 430 EQM--IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHC 487
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L M + G++PN I Y+T+IDG AG+ +E + ++ P V
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC+ ++ A + K M+S G P+ TYN + + A LY +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+SG + TY+I+L LCK + D A+++ + + ++ T ++I L ++ +
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
DEA F GLVP+Y T++ + + +G+
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 168/367 (45%), Gaps = 9/367 (2%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++ D GG PD VS + +I + + G + A T+ LD + +
Sbjct: 183 MMADDRGGGSAPDVVS---YTTVINGFFKEGDSDKAYSTYH--EMLD--RRISPDVVTYS 235
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ +LCK + A E + P YN +L+G+ S+ K+A F +MR
Sbjct: 236 SIIAALCKGQAMDKAMEVL--TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V P+VVTY +L++ C+ R A ++ M K G+EP+ Y T++ G G
Sbjct: 294 SDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALV 353
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E+ +++ + P + L+ Y K ++ A + M G P+ TY
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G V+DAM + +MI+ G TP+ + Y L+ LC DK D A ++ EM RG
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +IH C+ + E+ F+ M+R G+ P+ +T+ L D + G A KL
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 377 CNVMSSV 383
+ M SV
Sbjct: 534 LSSMFSV 540
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 6/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ C+ GR+ + + + + + LL G K DA L
Sbjct: 90 YGILIGCCCRAGRLDLG--FAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147
Query: 135 -MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM---RKEGIEPNAIVYNTVIDGLV 190
M + + P+V + L++G C R A+ L+ M R G P+ + Y TVI+G
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G ++ L P +VTY+S++ CK ++ A ++L M+ G +P+
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN + + ++A+ +KM G PD +TY+ L+ LCK + A ++ M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
RG + D+ T L+ E A + M+R G+ P + F L + K+
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 39/280 (13%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VTP V TYG L+ CR R+D + + K+G AI + ++ GL R +
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 200 GMMERF---LVCEP------------------------------------GPTMVTYTSL 220
++ R L C P P +V+YT++
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G+ K GD + A M+ R P TY+ K ++ AM + M+++G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ +TY+ +L C ++ AI K+M+ G + D+ T L+ LC+ + EA
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 2/255 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ P YN L+NG+ R + DA + E
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSM--FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+PN++TY +++G RR A L + K G + YN ++ GL +
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G + A + S G +P+ TY
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +E+ L+ M ++G T D + +++ L + ++ A + +
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
Query: 315 CDIDLDTSTMLIHLL 329
++ T+++ I LL
Sbjct: 752 FSLEASTASLFIDLL 766
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 185/375 (49%), Gaps = 16/375 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L A+ +D L + + VP+ V TF +L+R + R GMVE AI + +
Sbjct: 263 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEV---TFDMLVRFFCRGGMVERAIQVLQQMS 319
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +L I+++++CKQGRV A ++ + P Y +L G
Sbjct: 320 QHGCTPN----TTLCNIVINAICKQGRVDDAYDFLNNMGMY--GCNPDTISYTTVLRGLC 373
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A+ EM ++N PN VT+ T + C+ +++AI+L++ M + G +
Sbjct: 374 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV 433
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN ++ G GR V +E F L CEP +TYT+L+ G C A L+ A+++L
Sbjct: 434 TYNALVHGFCVQGR---VDSALELFNNLPCEPN--TITYTTLLTGLCHAERLDAAAELLA 488
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI + + T+N +F + G VE+AM L +M+E G TP+ +T++ LL + K+
Sbjct: 489 EMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 548
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A+++ + +G +D T + ++ +L R + +EA + G+ P +
Sbjct: 549 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 608
Query: 359 RLNDEFKKRGMTALA 373
++ KR T A
Sbjct: 609 KILFALCKRCETDQA 623
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 155/306 (50%), Gaps = 5/306 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ +C++GRV A E ++ + P + Y +L G ++ D + + E
Sbjct: 225 YNVIINGMCREGRVDDAKEILNRLSSY--GFQPDIVSYTTVLKGLCAARRWDDVKVLFAE 282
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VT+ LV +CR V+RAI+++++M + G PN + N VI+ + + GR
Sbjct: 283 MVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGR 342
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P ++YT++++G C+AG E A ++L M+ + P+ T+N
Sbjct: 343 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNT 402
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G +E A+ L M E G + +TY+ L+ C + ++D A+++ + C
Sbjct: 403 FICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP 462
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
I T T L+ LC + D A+ +MI++ + +TF L F ++G A
Sbjct: 463 NTI---TYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAM 519
Query: 375 KLCNVM 380
+L N M
Sbjct: 520 ELVNQM 525
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + P+V Y +LL +S +A EMR + TPN+VTY ++ G CR RV
Sbjct: 179 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 238
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A ++ + G +P+ + Y TV+ GL A R+++V + + + P VT+ L
Sbjct: 239 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 298
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
V+ +C+ G +E A ++L+ M G P+ T N K G+V+DA + M G
Sbjct: 299 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD ++Y +L+ LC+ + + A ++ EM + C + T I +LC+ ++A
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSM 387
E M G +T+ L F +G A +L N + P ++
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTI 465
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 128/246 (52%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVTY L+E C+ A+ ++ EMR +G PN + YN +I+G+ GR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ R P +V+YT+++KG C A + + M+ + +P+ T++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R+F + G VE A+ + ++M + G TP+ +I++ +CK+ ++D A M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C+ D + T ++ LCR +++ A +M+R+ P+ +TF ++G+ A
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417
Query: 375 KLCNVM 380
KL +M
Sbjct: 418 KLIELM 423
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 143/304 (47%), Gaps = 9/304 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F++L+ C+ G V+ A + + + P + NI++N + V DA F
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQ--HGCTPNTTLCNIVINAICKQGRVDDAYDFLNN 352
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+ ++Y T++ G CR R + A L+ EM ++ PN + +NT I L + G
Sbjct: 353 MGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL 412
Query: 195 FEEVSGMMERFLVCEPGPT--MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
E+ ++E L+ E G + +VTY +LV G+C G ++ A ++ + P+ TY
Sbjct: 413 IEQAIKLIE--LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITY 467
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+++ A L +MI+ + +T+++L+ C++ ++ A+++ +M
Sbjct: 468 TTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 527
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
GC +L T L+ + + +EA ++ +G+ +T+ + D + T
Sbjct: 528 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEE 587
Query: 373 AQKL 376
A ++
Sbjct: 588 AIQM 591
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I + K D A+ L+ +G + PD +S + ++R RAG W E A
Sbjct: 333 VINAICKQGRVDDAY-DFLNNMGMYGCNPDTIS---YTTVLRGLCRAGR-----W--EHA 381
Query: 60 NNL--DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
L +MV KN F + LC++G ++ A + E S + YN L+
Sbjct: 382 KELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG--IVTYNALV 439
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ V A + + E PN +TY TL+ G C R+D A L+ EM ++
Sbjct: 440 HGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCP 496
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
NA+ +N ++ + G EE ++ + + P ++T+ +L+ G K + E A ++
Sbjct: 497 LNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALEL 556
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L ++S+G TY+ S+ + E+A+ + + + G P Y+ +L LCK
Sbjct: 557 LHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCK 616
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ D AI M GC + T +LI L EA ++ +G++ L
Sbjct: 617 RCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 675
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGAS--KILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P P+ T T + EG++ M+ RG PS TY K +
Sbjct: 146 PCPSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGE 205
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AMN+ +M G TP+ +TY++++ +C+E ++D A ++ + G D+ + T ++
Sbjct: 206 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 265
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
LC ++D+ F +M+ + VP+ +TF L F + GM A ++ MS
Sbjct: 266 GLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 319
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 161/333 (48%), Gaps = 5/333 (1%)
Query: 51 AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR 110
+W F + LD F +F IL++ CK+G + A + F + + +S PTV
Sbjct: 222 GTVWGF-YMEILD--AGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITK--RSLRPTVV 276
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + N+ R M K P+V TY L+ C+ ++D A RL EM
Sbjct: 277 SFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEM 336
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ G+ PN +++ T+I G G+ + + ++ L P +V Y +LV G+CK GDL
Sbjct: 337 CERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A I+ MI RG P TY F + G V+ A+ + ++M ++G DR+ + L
Sbjct: 397 VAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSAL 456
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ +CKE ++ A + +EM G D T TM++ C+ ++M G
Sbjct: 457 ICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+P+ +T+ L + K G A L + M +V
Sbjct: 517 IPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNV 549
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 117/219 (53%), Gaps = 2/219 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F L+ + G++ E + +K L + P + +YN L+NG+ ++ ++ A
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESY--QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + + P+ VTY TL++G+CR VD A+ + KEM + GIE + + ++ +I G+ + G
Sbjct: 405 GMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEG 464
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + + L P VTYT ++ +CK GD + K+LK M S G +P+ TYN
Sbjct: 465 RVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYN 524
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K G++++A L M+ G PD +TY+ LL+
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLE 563
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 41/284 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--- 57
+I L K + D A L + +P+ V F LI ++R G ++ +++
Sbjct: 316 LINALCKENKMDGAHRLFYEMCERGLIPNDV---IFTTLIHGHSRNGQIDLMKESYQKML 372
Query: 58 -----------------FANNLDMV--KNFDSG---------ASLFEILLDSLCKQGRVK 89
F N D+V +N G + L+D C+ G V
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVD 432
Query: 90 AASEYFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A E RKE+DQ+ RV ++ L+ G + V DAER EM + + P+ VTY
Sbjct: 433 TALEI---RKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYT 489
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
+++ +C+ +L+KEM+ +G PN + YN +++GL + G+ + +++ L
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNV 549
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
P +TY +L++G+ + + ASK K G + +Y
Sbjct: 550 GVVPDDITYNTLLEGHHRHAN---ASKHYKQKPEIGIVADLASY 590
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 124/336 (36%), Gaps = 76/336 (22%)
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
RK N + G L++ +L E+ G N V+N +++ + G
Sbjct: 197 RKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNI 256
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL------------------------- 230
+ + + PT+V++ +L+ GYCK G+L
Sbjct: 257 CDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSAL 316
Query: 231 ----------EGASKILKMMISRGFLPSPTT----------------------------- 251
+GA ++ M RG +P+
Sbjct: 317 INALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGL 376
Query: 252 ------YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
YN F K G + A N+ MI G PD++TY L+ C+ +D A++
Sbjct: 377 QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALE 436
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ KEM G ++D + LI +C+ + +A +M+R G+ P +T+ + D F
Sbjct: 437 IRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFC 496
Query: 366 KRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
K+G KL M S +P + LL+ CK
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCK 532
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I++ LCK+G+++ + R Q P + YN L++G+ + +++ A ++E++
Sbjct: 209 IMVKGLCKEGKLEEGRKLIEDR--WGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK 266
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ P V TYG ++ G+C+ RL+ EM G+ N VYNT+ID + G
Sbjct: 267 LKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIV 326
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ +E + C P +VTY +L+ G C+ G + A ++L+ + +G +P+ +Y
Sbjct: 327 KAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLI 386
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ K G + A N +M E G+ PD +TY L+ L ++D+A+ + ++M RG
Sbjct: 387 HAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 446
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D +L+ LC+ +K A +M+ + ++P + L D F + G A+KL
Sbjct: 447 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 506
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 172/350 (49%), Gaps = 13/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI R G V A E A ++ N S + L+ + CKQG
Sbjct: 342 PDIVTYNT---LISGSCRDGKVSEADQLLEQALGKGLMPNKFS----YTPLIHAYCKQGG 394
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
AS + + E + P + Y L++G + V A +M + V P+ Y
Sbjct: 395 YDRASNWLIEMTE--RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G C+ ++ A L+ EM + + P+A VY T++DG + G +E + E L
Sbjct: 453 NILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFE--LT 510
Query: 208 CEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E G P +V Y +++KGYCK G ++ A + M R P TY+ + K +
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ A ++R+M++ P+ +TY L+ C++ L ++++ +EM+ G ++ T ++L
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
I C+ K +A++ FE+M+ VP+ +TF L + F K G A+++K
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK 680
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 145/307 (47%), Gaps = 2/307 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+D CK+G ++ A+ F + K + + PTV Y ++NG+ + + K +R +
Sbjct: 241 FYNTLIDGYCKKGDMEMANGLFIELKL--KGFLPTVETYGAIINGFCKKGDFKAIDRLLM 298
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM +T NV Y T+++ + + +A+ ++ M + G +P+ + YNT+I G G
Sbjct: 299 EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDG 358
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E ++E+ L P +YT L+ YCK G + AS L M RG P TY
Sbjct: 359 KVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYG 418
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
G+V+ A+ + KM+E G PD Y+IL+ LCK+ KL A + EM +
Sbjct: 419 ALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 478
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D L+ R DEA FE I +G+ P + + + + K GM A
Sbjct: 479 SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDA 538
Query: 374 QKLCNVM 380
N M
Sbjct: 539 MACINRM 545
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 166/383 (43%), Gaps = 66/383 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K +D A L++ PD V T+ L+ AG V+ A+ E
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLV---TYGALVHGLVVAGEVDVALTIRE--- 438
Query: 61 NLDMVKNFDSG----ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
K + G A ++ IL+ LCK+ ++ AA + LDQS P VY L+
Sbjct: 439 -----KMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM--LDQSVLPDAFVYATLV 491
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ R+ N+ +A + + ++ + P +V Y +++GYC+ + A+ + M+K +
Sbjct: 492 DGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLA 551
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ Y+TVIDG V+ + M + + P +VTYTSL+ G+C+ GDL + KI
Sbjct: 552 PDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKI 611
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA---------------------------- 268
+ M + G +P+ TY+ F K K+ DA
Sbjct: 612 FREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSK 671
Query: 269 ---------------------MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+N + +MI G+ P Y+ +L LC+ A+Q+S
Sbjct: 672 NGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLS 731
Query: 308 KEMKCRGCDIDLDTSTMLIHLLC 330
+M +GC D + L+H +C
Sbjct: 732 NKMTSKGCIPDSVSFVALLHGVC 754
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 143/310 (46%), Gaps = 25/310 (8%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPD-FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
L K + +A LL + + +PD FV + L+ + R G ++ A FE L
Sbjct: 459 LCKKFKLPAAKLLLAEMLDQSVLPDAFV----YATLVDGFIRNGNLDEARKLFE----LT 510
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ K + G + ++ CK G +K A ++ K+ + AP Y+ +++G+ +
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKK--RHLAPDEFTYSTVIDGYVKQH 568
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ A++ + EM K PNVVTY +L+ G+CR + R++++ +EM+ G+ PN + Y+
Sbjct: 569 DLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYS 628
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK-------- 235
+I + + + + E L+ + P VT+ LV G+ K G + K
Sbjct: 629 ILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENK 688
Query: 236 ------ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
MIS G+ P YN ++G A+ L KM G PD +++
Sbjct: 689 QSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVA 748
Query: 290 LLKILCKEDK 299
LL +C E +
Sbjct: 749 LLHGVCLEGR 758
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N Y++++ L + F E+ ++E V E PT + +++ Y +G +E A ++
Sbjct: 93 NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152
Query: 238 KMMI-SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH----ILLK 292
++ + + P N K G++E A LY +M+E DR + I++K
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LCKE KL+ ++ ++ +GC ++ LI C+ + A+ F ++ +G +P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272
Query: 353 HYLTFKRLNDEFKKRG 368
T+ + + F K+G
Sbjct: 273 TVETYGAIINGFCKKG 288
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 9/322 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI G ++ A+ F N ++KN F IL+D LCK+G
Sbjct: 237 PDVV---TYTTLIYGCLIVGRLKEAVGLF----NQMLLKNIKPDVYTFNILVDGLCKEGE 289
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+K A + Q + YN L++G+F K A + M + VTP+V +Y
Sbjct: 290 MKKARNVL--AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSY 347
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ G C+ + VD A+ L KEM + + PN + YN++IDGL++ GR + ++
Sbjct: 348 SIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN 407
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
++TY+SL+ CK ++ A ++ + +G P+ TY K G+++D
Sbjct: 408 RGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKD 467
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A +Y+ ++ GY D Y++++ LCKE D A+ + +M+ GC D T L+
Sbjct: 468 AQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVR 527
Query: 328 LLCRMYKFDEASAEFEDMIRRG 349
L K D+A +MI +G
Sbjct: 528 ALFENDKNDKAVKLLREMIVQG 549
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 167/356 (46%), Gaps = 11/356 (3%)
Query: 21 KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLD 80
K+G H PD V T LI+ G V A+ F +++ + K F + L++
Sbjct: 127 KLGFH--PDTV---TITTLIKGLCLNGKVREAL---HFHDDV-IAKGFHLDQVSYGTLIN 177
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
LCK G +AA + K L P V +YN +++ + K V A EM + +
Sbjct: 178 GLCKTGETRAALQVLRKIDGL--LVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI 235
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P+VVTY TL+ G + R+ A+ L +M + I+P+ +N ++DGL + G ++
Sbjct: 236 FPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARN 295
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ + +VTY SL+ GY A+ + M RG P +Y+
Sbjct: 296 VLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLC 355
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K V++A+NL+++M P+ +TY+ L+ L K ++ A + EM RG D+
Sbjct: 356 KTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVI 415
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T + L+ LC+ ++ D+A + +G+ P+ T+ L D K G AQ +
Sbjct: 416 TYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAV 471
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+K A F++ L ++ P V +NIL++G + +K A M K+ V N+V
Sbjct: 253 GRLKEAVGLFNQM--LLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIV 310
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY +L++GY +++ ++A + M + G+ P+ Y+ +I+GL + +E + +
Sbjct: 311 TYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEM 370
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P VTY SL+ G K G + A ++ M +RG TY+ K +V
Sbjct: 371 HSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQV 430
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ A+ L K+ + G P+ TY IL+ LCK +L A V +++ +G +D+ ++
Sbjct: 431 DKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVM 490
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ LC+ FDEA + M G +P +T++ L
Sbjct: 491 VNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 158/331 (47%), Gaps = 14/331 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ C G + A K +L + P L+ G + V++A F +
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKL--GFHPDTVTITTLIKGLCLNGKVREALHFHDD 159
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + V+YGTL+ G C+ A+++++++ ++PN ++YNT+ID L +
Sbjct: 160 VIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKL 219
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
S + +V P +VTYT+L+ G G L+ A + M+ + P T+N
Sbjct: 220 VIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNI 279
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK---ILCKEDKLDLAIQVSKEMK 311
K G+++ A N+ MI+ G + +TY+ L+ ++ +E+K A V M
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK---ATFVFNTMA 336
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
RG D+ + +++I+ LC+ DEA F++M + + P+ +T+ L D K G +
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396
Query: 372 LAQKLCNVM------SSVPRSMELLDSRCKD 396
A L N M + V LLD+ CK+
Sbjct: 397 DAWDLVNEMHNRGQPADVITYSSLLDALCKN 427
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L SL K A F K+ EL Q P + +NIL+N + ++ A +
Sbjct: 67 FNKILSSLVKLNHFHTAIS-FSKQMELKQ-IQPDLFTFNILINCFCHLGHLNFAFSVLAK 124
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K P+ VT TL++G C +V A+ ++ +G + + Y T+I+GL + G
Sbjct: 125 IFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGE 184
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + P +V Y +++ CK + AS + MI + P TY
Sbjct: 185 TRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTT 244
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G++++A+ L+ +M+ PD T++IL+ LCKE ++ A V M +G
Sbjct: 245 LIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQG 304
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D ++ T L+ + + ++A+ F M RRG+ P ++ + + K M A
Sbjct: 305 VDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAV 364
Query: 375 KLCNVMSS 382
L M S
Sbjct: 365 NLFKEMHS 372
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 1/258 (0%)
Query: 124 NVKDA-ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
NV DA F + N + + ++ +L AI K+M + I+P+ +
Sbjct: 43 NVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTF 102
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I+ G ++ + P VT T+L+KG C G + A +I+
Sbjct: 103 NILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIA 162
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+GF +Y K G+ A+ + RK+ P+ + Y+ ++ LCK+ +
Sbjct: 163 KGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIH 222
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + EM + D+ T T LI+ + + EA F M+ + + P TF L D
Sbjct: 223 ASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVD 282
Query: 363 EFKKRGMTALAQKLCNVM 380
K G A+ + VM
Sbjct: 283 GLCKEGEMKKARNVLAVM 300
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 20/388 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L A + D A LL + P+ V + L++ Y +AG E FE +
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVV---VYSCLLQGYCKAGRWECVSKVFEEMS 210
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + ++ L+DSLC++G+VK A++ K E + P V YN+L+N
Sbjct: 211 G----RGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME--RGLEPNVVTYNVLINSMC 264
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPN 178
+ +VK+A M ++ V + VTY TL+ G + +D A+ L++EM + +EPN
Sbjct: 265 KEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPN 324
Query: 179 AIVYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ +N+VI GL + GR F+ M E C +VT+ L+ G + ++ A
Sbjct: 325 VVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC----NLVTFNLLIGGLLRVHKVKKAM 380
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+++ M S G P TY+ F K +V+ A +L KM G P+ + Y LL L
Sbjct: 381 ELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C++ ++ A EM + C +D+ + +IH CR+ A + M+ GL+P
Sbjct: 441 CEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDS 499
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+T+ L + F G A+++ M++
Sbjct: 500 VTYSMLINMFANSGDLGAAERVLKQMTA 527
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 151/317 (47%), Gaps = 31/317 (9%)
Query: 104 SWAPTVR---VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
S P+VR YN +L R DA F L + P V+Y TL+ C RR
Sbjct: 70 SSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRT 129
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYT 218
+A+ L+++M+ G+ P+ + Y T+I GL +A ++ ++ CE G P +V Y+
Sbjct: 130 GQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM--CESGIEPNVVVYS 187
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
L++GYCKAG E SK+ + M RG P Y + GKV+ A + KM+E
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY++L+ +CKE + A+ + M +G +D T LI L + + DEA
Sbjct: 248 GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEA 307
Query: 339 SAEFEDMIRRGLV--PHYLTFK----------RLNDEFKKRGMTALAQKLCNVMS----- 381
E+MI + P+ +TF R+ F+ R M A CN+++
Sbjct: 308 MGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLI 367
Query: 382 -------SVPRSMELLD 391
V ++MEL+D
Sbjct: 368 GGLLRVHKVKKAMELMD 384
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F ++ LCK GR++ A F R + + A + +N+L+ G R VK A
Sbjct: 328 FNSVIHGLCKTGRMRQA---FQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMD 384
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + P+ TY L+ G+C++ +VDRA L+ +MR++GIEP + Y ++ L E G
Sbjct: 385 EMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQG 444
Query: 194 RFEEVSGMM-ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
E+ E C+ +V Y++++ G C+ D + A + LK M+ G +P TY
Sbjct: 445 MMEQARNFFDEMHKNCKL--DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTY 502
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ F+ G + A + ++M SG+ PD + L+K + + +++ +EM
Sbjct: 503 SMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTA 562
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+ DI LD+ ++ +Y A+ E + +++ VP + T +T +
Sbjct: 563 K--DIALDSK-----IISTIYTCLVANNEGKALLQS--VPGFDTEVSKGAVISSHELTNM 613
Query: 373 AQKLCN 378
KLCN
Sbjct: 614 LHKLCN 619
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 174/381 (45%), Gaps = 46/381 (12%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ V T+ LI+ + A F L N A + L+ LC+ G
Sbjct: 158 IPNVV---TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPN----AVTYGTLIKGLCQTG 210
Query: 87 RVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
V A E + + + P V Y+I+++G + +A+ + EM+ + + P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V++Y TL+ G+C + D++ L EM +G++P+ + ++ +ID L + G+ E ++
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E + P ++TY SL+ G+C GDL A ++ M S+G P +Y + K
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKT 390
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLK------------------------------ 292
KV++AMNLY +M++ G +P+ TY LLK
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIY 450
Query: 293 -----ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
LCK D L A+++ E+K ++++ + LI LC+ K + A FE + +
Sbjct: 451 GIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQ 510
Query: 348 RGLVPHYLTFKRLNDEFKKRG 368
GL P +T+ + F K G
Sbjct: 511 EGLQPDVVTYNIMIHGFCKVG 531
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 167/358 (46%), Gaps = 50/358 (13%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQ 85
+PD +S T LI + AG + + F+ +MV + F +L+D+LCK+
Sbjct: 269 IPDVISYST---LIHGFCCAGKWDQSKHLFD-----EMVDQGVQPDMVTFSVLIDTLCKE 320
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G+V A + + + P + YN L++G+ ++ A +L M + + P+ +
Sbjct: 321 GKVTEAKKLLEVM--IQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEI 378
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS---GMM 202
+Y TL+ GYC+ +V A+ L EM + G PN Y T++ GL + G+ + G+M
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438
Query: 203 ERFLVCEPGP--------------------------------TMVTYTSLVKGYCKAGDL 230
+ + V + Y+ L+ G CKAG L
Sbjct: 439 KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKL 498
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++ + + G P TYN F K G+V++A L+ KM E+G TPD + Y+ L
Sbjct: 499 ETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTL 558
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L C+ +KL+ I++ +M + + + T+++ +LC+ DE +F D++ +
Sbjct: 559 LCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK----DEKYKKFVDLLPK 612
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G + A + + P + +N LL G + + + EMR ++P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ T L C + RV A+ + + + G PN + Y T+I GL R E + +
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL------PSPTTYNYFF 256
R P VTY +L+KG C+ G++ A K+ K M++ P TY+
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G+ ++A L+ +M G PD ++Y L+ C K D + + EM +G
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
D+ T ++LI LC+ K EA E MI+RG+VP+ +T+ L D F
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 159/361 (44%), Gaps = 35/361 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTF-EFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAAS 92
T+ LI+ + G V A+ E N+ N G + I++D LCK GR A
Sbjct: 198 TYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAK 257
Query: 93 EYFHKRKE---------------------------------LDQSWAPTVRVYNILLNGW 119
E F + K +DQ P + +++L++
Sbjct: 258 ELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTL 317
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V +A++ M + + PN++TY +L++G+C + ++ A L M +G+EP+
Sbjct: 318 CKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDE 377
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y T+I+G + + +E + L P + TY +L+KG + G + A K+ +
Sbjct: 378 ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G + Y F K + +AM L+ ++ + + Y L+ LCK K
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A ++ +++ G D+ T ++IH C++ + D A+ FE M G P + +
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557
Query: 360 L 360
L
Sbjct: 558 L 558
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
NF + L+D LCK G+++ A E F K + + P V YNI+++G+ + V
Sbjct: 477 NFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQ--EGLQPDVVTYNIMIHGFCKVGQVD 534
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A + +M + TP+++ Y TL+ G+C +++ I+L+ +M ++ + PNA V+
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Query: 187 DGLVEAGRFEEVSGMMERFLV 207
D L + ++++ ++ +F V
Sbjct: 595 DMLCKDEKYKKFVDLLPKFPV 615
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 19/404 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEF 58
+ +A+ K++D L+L G E+ + + D T I+I Y R + A
Sbjct: 105 LCSAVARTKQYD----LVLGFCKGMEL-NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 159
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A L ++ F L++ C +GRV A + E+ Q P + + L+NG
Sbjct: 160 AWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR--PDLVTVSTLING 213
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
V +A M + P+ VTYG ++ C+ A+ L ++M + I+ +
Sbjct: 214 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 273
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ VID L + G F++ + + +VTY+SL+ G C G + +K+L+
Sbjct: 274 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI R +P T++ F K GK+ +A LY +MI G PD +TY+ L+ CKE+
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A Q+ M +GC+ D+ T ++LI+ C+ + D+ F ++ +GL+P+ +T+
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS--VPRSME----LLDSRCKD 396
L F + G A++L M S VP S+ LLD C +
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 497
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 169/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ ++ R ++G A+ F +N + + I++DSLCK G
Sbjct: 237 PDEV---TYGPVLNRLCKSGNSALALDLFRKMEE----RNIKASVVQYSIVIDSLCKDGS 289
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A F++ + + V Y+ L+ G D + EM N+ P+VVT+
Sbjct: 290 FDDALSLFNEMEM--KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 347
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++ + + ++ A L EM GI P+ I YN++IDG + E + M + +
Sbjct: 348 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 407
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY+ L+ YCKA ++ ++ + + S+G +P+ TYN F + GK+
Sbjct: 408 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 467
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L+++M+ G P +TY ILL LC +L+ A+++ ++M+ + + ++IH
Sbjct: 468 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 527
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C K D+A + F + +G+ P +T+ + K+G + A L
Sbjct: 528 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 576
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 11/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L ++D +L + IG + +PD V TF LI + + G ++EA E
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVV---TFSALIDVFVKEGKLLEAK----ELY 367
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + + + + L+D CK+ + A++ F + + P + Y+IL+N +
Sbjct: 368 NEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGCEPDIVTYSILINSY 424
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V D R + E+ + + PN +TY TLV G+C+ +++ A L +EM G+ P+
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y ++DGL + G + + E+ + Y ++ G C A ++ A +
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P TYN K G + +A L+RKM E G TPD TY+IL++
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L ++++ +EMK G D T M+I +L
Sbjct: 605 LISSVELIEEMKVCGFSADSSTIKMVIDML 634
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PT +N L + R+K F M + ++ T ++ YCR +++ A +
Sbjct: 97 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 156
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ K G EP+ I ++T+++G GR E +++R + + P +VT ++L+ G C
Sbjct: 157 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 216
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++ M+ GF P TY K G A++L+RKM E +
Sbjct: 217 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 276
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK+ D A+ + EM+ +G D+ T + LI LC K+D+ + +MI
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
R ++P +TF L D F K G A++L N M + P ++ L+D CK+
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 392
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G+V+ + + + E + P PT + + L + + K M G
Sbjct: 73 NGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 131
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
T + + K+ A ++ + + GY PD +T+ L+ C E ++ A+ +
Sbjct: 132 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 191
Query: 307 SK---EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
EMK R DL T + LI+ LC + EA + M+ G P +T+ + +
Sbjct: 192 VDRMVEMKQRP---DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248
Query: 364 FKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
K G +ALA L N+ +SV + ++DS CKD
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 287
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 176/348 (50%), Gaps = 12/348 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKI--GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+++ L K + + A L+ D I GG PD V T+ L+ Y +AG VE + +
Sbjct: 51 LLEGLCKLERWHEAEELVRDMISRGGRSTPDMV---TYSTLLSGYCKAGKVEESRELLKE 107
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + A ++ ++ SLCK R+ A E + + PT+ +N L++G
Sbjct: 108 V----ISRGLRPDALMYTKVVASLCKSARLGEALELLEEM--IRAGCCPTLITFNTLISG 161
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R KN++ A+ +M V +VVTY TL++G C+ R+ A +L++ M+ G P+
Sbjct: 162 CCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y++ + GL ++G+ + ++E+ P +VTY +++ G CK+G ++ A ++++
Sbjct: 222 VVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMME 281
Query: 239 MMISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M S G + Y+ K G+ ++A ++ M +G PD +TY L+ LCK
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKA 341
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
K++ A++ +EM GC + T L+H LC + EA E+M
Sbjct: 342 GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 139/263 (52%), Gaps = 8/263 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D LCK GR++ A + + K AP V Y+ + G +S V DA + +
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKA--SGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEAG 193
MR + PNVVTY T+++G C+ ++D A+ ++++M +G N + Y+TV+DGL + G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E +ME P +VTY+SLV G CKAG +E A + ++ M G P+ TY
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYT-----PDRLTYHILLKILCKEDKLDLAIQVSK 308
G++ +A + +M G P TY+ L+ LCK ++D A++ +
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Query: 309 EMKCRGCDIDLDTSTMLIHLLCR 331
M+ +GCD D + + ++ L R
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLAR 450
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 152/332 (45%), Gaps = 40/332 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ KQGR D P V YN LL G + + +AE +
Sbjct: 13 FNALVNGFSKQGRPGDCERLLETMAARD--IQPNVVSYNGLLEGLCKLERWHEAEELVRD 70
Query: 135 M--RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY---------- 182
M R TP++VTY TL+ GYC+ +V+ + L+KE+ G+ P+A++Y
Sbjct: 71 MISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKS 130
Query: 183 -------------------------NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
NT+I G E ++++ +VTY
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTY 190
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ G CKAG L+ A ++L+ M + G P Y+ F K GKV DA + +M +
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRD 250
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFD 336
S + P+ +TY+ +L LCK K+D A+++ ++M GC +++ + ++ LC++ +
Sbjct: 251 SHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EA + E M R G P +T+ L + K G
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL CK G+V+ + E ++ + + P +Y ++ +S + +A E
Sbjct: 85 YSTLLSGYCKAGKVEESRELL--KEVISRGLRPDALMYTKVVASLCKSARLGEALELLEE 142
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P ++T+ TL+ G CR + ++ A L+++M G++ + + YNT++DGL +AGR
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGR 202
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ER P +V Y+S V G CK+G + A ++L+ M P+ TYN
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNT 262
Query: 255 FFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K GK++ A+ + +M S G + + Y ++ LCK + A V + M
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
GC D+ T + L++ LC+ K +EA +M G P+ +T+ L G A A
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382
Query: 374 QKL 376
+++
Sbjct: 383 ERM 385
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 3/285 (1%)
Query: 101 LDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR 159
+D++ P V +N L+NG+ + D ER M ++ PNVV+Y L+EG C+L R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 160 VDRAIRLVKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
A LV++M G P+ + Y+T++ G +AG+ EE +++ + P + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T +V CK+ L A ++L+ MI G P+ T+N + +E A +L +KM
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
SG D +TY+ L+ LCK +L A Q+ + MK GC D+ + ++ LC+ K +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
A E M P+ +T+ + D K G A ++ M+S
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ LCK G+++ A E R+ + P Y L++G + +AER E
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAV--REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEE 388
Query: 135 MRKEN-----VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
M P+V TY L+ G C+ R+D A++ + MR +G +P+ + Y+T+++GL
Sbjct: 389 MSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Query: 190 VEAGR 194
+GR
Sbjct: 449 ARSGR 453
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ L+ +AG +E A+ E + M + A + L+ LC GR
Sbjct: 326 PDVV---TYSSLVNGLCKAGKIEEAV---EAVREMAM-EGCKPNAVTYCSLVHGLCSCGR 378
Query: 88 VKAAS---EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
+ A E P+V YN L+ G ++ + DA +F+ MR + P+
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMR 171
V+Y T+VEG R R +A ++ E+R
Sbjct: 439 VSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 167/309 (54%), Gaps = 14/309 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVLMIDSYGKEGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF++++ ++GR A YF+K L + PT +N+++ G+F
Sbjct: 108 ELGVERTIKSYDALFKVIM----RRGRFMMAKRYFNKM--LSEGIEPTRHTFNVMIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ ++P+V+TY T++ GYCR+++++ A + EM+ + IEP +
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V + ++ ++E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 282 VDKYI--APTDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKA 339
Query: 298 DKLDLAIQV 306
+ D A+++
Sbjct: 340 GQYDQAVKL 348
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P ++TY +++ GYC+ +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M + P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C++ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + + K G A KL +
Sbjct: 325 EAGHYGVLIENYCKAGQYDQAVKLLD 350
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GRF + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAP 288
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGAKNSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ C+ K++ A + EMK + + + T T LI + + D+A E+M
Sbjct: 190 TMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCK 303
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 137/306 (44%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYCRVKKMEEAEKYFVEMKGKNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GYGIKPN----AITYSTLLPGLCNAEKMSEARSIL--KEMVDKYIAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+ N+ A M + +V YG L+E YC+ + D+A++L+ ++ ++ I
Sbjct: 302 CKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +++ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHMEPSA--YNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPADAKAALDSMIENDHLPDSSLFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 11/349 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ LI AG ++ A+ F + DM ++ L+ LC R +
Sbjct: 47 SYATLIEGLCEAGRIDEAVELFGEMDQPDM--------HMYAALVKGLCNAERGEEGLLM 98
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ KEL W P+ R Y +++ R + K+AE EM ++ + P VVT ++ Y
Sbjct: 99 LRRMKEL--GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 156
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R+ A+R+++ M+ G +PN YN ++ G G+ + ++ + C P
Sbjct: 157 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDA 216
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L++G C G +E A ++L++M G + TYN K G+ + A +L+
Sbjct: 217 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 276
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G P+ +T++ L+ LCK K D+A + ++M GC D T + I LC+M
Sbjct: 277 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 336
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK-RLNDEFKKRGMTALAQKLCNVMSS 382
E + +M+++ + P + + ++ K+R +A+ ++SS
Sbjct: 337 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 385
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 151/312 (48%), Gaps = 6/312 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A F L+ C+ +V A + F K + +A V Y L+ G + + +A
Sbjct: 10 AYTFNSLIVGYCRTNQVDVARDLFDKMPL--RGFAQDVVSYATLIEGLCEAGRIDEAVEL 67
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM + P++ Y LV+G C R + + +++ M++ G P+ Y V+D
Sbjct: 68 FGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ +E M++ P +VT T+++ YCK G + A ++L++M RG P+ T
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + F GKV AM L KM G PD +TY++L++ C + ++ A ++ + M+
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
G D T LI+ LC+ + D+A + F+ + RG+ P+ +TF L + K G
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303
Query: 372 LAQKLCNVMSSV 383
+A K M S
Sbjct: 304 IAWKFLEKMVSA 315
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 2/306 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++++ CK+GR+ A K + P V YN L+ G+ V A +MR
Sbjct: 152 VINAYCKEGRMSDALRVLELMKL--RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 209
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
V P+ VTY L+ G C ++ A RL++ M +G+ + YN +I+ L + GR ++
Sbjct: 210 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 269
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + P VT+ SL+ G CK+G + A K L+ M+S G P TY+ F
Sbjct: 270 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 329
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K ++ ++ +M++ P + Y I++ L KE L + EM GC+
Sbjct: 330 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 389
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ T T + C + +EA +M + G+ + + L D G T A +
Sbjct: 390 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 449
Query: 378 NVMSSV 383
M+SV
Sbjct: 450 KQMTSV 455
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 163/412 (39%), Gaps = 62/412 (15%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LL+K+ V PD V T+ +LIR G +E+A ++ + +
Sbjct: 203 LLNKMRACGVNPDAV---TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD----QYTYN 255
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+++LCK GR A F + + P +N L+NG +S A +F +M
Sbjct: 256 ALINALCKDGRTDQACSLFDSLET--RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 313
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
TP+ TY + +E C+++ + + EM ++ ++P+ + Y VI L++ +
Sbjct: 314 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 373
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
V+ + P +VTYT+ ++ YC G L A +L M G YN
Sbjct: 374 LVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 433
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK----EDKLDL---------- 302
+ G+ + A+++ ++M P++ TY ILL+ L + ED L L
Sbjct: 434 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE 493
Query: 303 --------------------------------------AIQVSKEMKCRGCDIDLDTSTM 324
A + MK ++ D T
Sbjct: 494 LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTA 553
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
L+ C+ ++ +A MI+ G +P ++++ L G T A+++
Sbjct: 554 LVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 605
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS-- 199
P+ T+ +L+ GYCR +VD A L +M G + + Y T+I+GL EAGR +E
Sbjct: 8 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67
Query: 200 -GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
G M++ P M Y +LVKG C A E +L+ M G+ PS Y +
Sbjct: 68 FGEMDQ-------PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ K ++A + ++M E G P +T ++ CKE ++ A++V + MK RGC +
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T L+ C K +A M G+ P +T+ L
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 222
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 154/395 (38%), Gaps = 65/395 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+ + D AW L + PD + +F+
Sbjct: 292 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI----------------------- 328
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGW 119
+ LCK +K + E E L + P+ Y I+++
Sbjct: 329 -------------------EHLCK---MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 366
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +N R W EM P+VVTY T + YC R++ A ++ EM K G+ +
Sbjct: 367 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 426
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK----------------- 222
+ YNT++DG G+ + ++++ P TY L++
Sbjct: 427 MAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA 486
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G KA +L + +M FLP+ TY+ FS+ G+ E+A +L M E +
Sbjct: 487 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 546
Query: 283 DRLTYHILLKILCKEDK-LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
+ Y L+ CK + LD + V ++ + +L L+C + D+A
Sbjct: 547 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICE-GQTDKAKEI 605
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F + + P + +K + D K+G + +++++
Sbjct: 606 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREM 640
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 4/211 (1%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M + G P+A +N++I G + + + ++ + +V+Y +L++G C+AG
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
++ A ++ M P Y + + E+ + + R+M E G+ P Y
Sbjct: 61 IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ C+E K A ++ +EM +G + T T +I+ C+ + +A E M RG
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P+ T+ L F G A L N M
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 207
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 65/146 (44%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P Y+ +L G+ ++A M++++++ N Y LV +C+ +R A L
Sbjct: 511 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 570
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
V M + G P + Y ++ GL+ G+ ++ + + P + + ++ G K
Sbjct: 571 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 630
Query: 227 AGDLEGASKILKMMISRGFLPSPTTY 252
G + + +++ M+ PS TY
Sbjct: 631 KGHSDISREMIIMLERMNCRPSHQTY 656
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 175/348 (50%), Gaps = 12/348 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKI--GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+++ L K + + A L+ D I GG PD V T+ L+ Y +AG VE + +
Sbjct: 51 LLEGLCKLERWHEAEELVRDMISRGGRSTPDLV---TYSTLLSGYCKAGKVEESRELLKE 107
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + A ++ ++ SLCK R+ A E + + PT+ +N L++G
Sbjct: 108 V----ISRGLRPDALMYTKVMASLCKSARLGEALELLEEM--IRAGCCPTLITFNTLISG 161
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
R KN++ A+ M V +VVTY TL++G C+ R+ A +L++ M+ G P+
Sbjct: 162 CCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y++ + GL ++G+ ++E+ + P +VTY +++ G CK+G ++ A ++++
Sbjct: 222 VVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMME 281
Query: 239 MMISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M S G + Y+ K G+ ++A ++ M +G PD +TY L+ LCK
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKA 341
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
K++ A++ +EM GC + T L+H LC + EA E+M
Sbjct: 342 GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 139/263 (52%), Gaps = 8/263 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D LCK GR++ A + + K AP V Y+ + G +S V +A + +
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKA--SGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEAG 193
MR + PNVVTY T+++G C+ ++D A+ ++++M +G N + Y+TV+DGL + G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E +ME P +VTY+SLV G CKAG +E A + ++ M G P+ TY
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL-----TYHILLKILCKEDKLDLAIQVSK 308
G++ +A + +M G D TY+ L+ LCK ++D A++ +
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Query: 309 EMKCRGCDIDLDTSTMLIHLLCR 331
M+ +GCD D + + ++ L R
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLAR 450
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 150/303 (49%), Gaps = 3/303 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL CK G+V+ + E ++ + + P +Y ++ +S + +A E
Sbjct: 85 YSTLLSGYCKAGKVEESRELL--KEVISRGLRPDALMYTKVMASLCKSARLGEALELLEE 142
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P ++T+ TL+ G CR + ++ A L++ M G++ + + YNT++DGL +AGR
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGR 202
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ER P +V Y+S V G CK+G + A ++L+ M P+ TYN
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNT 262
Query: 255 FFRYFSKFGKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K GK++ A+ + +M S G + + Y ++ LCK + A V + M
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
GC D+ T + L++ LC+ K +EA +M G P+ +T+ L G A A
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382
Query: 374 QKL 376
+++
Sbjct: 383 ERM 385
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 151/332 (45%), Gaps = 40/332 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ KQGR + P V YN LL G + + +AE +
Sbjct: 13 FNALVNGFSKQGRPGDCERLLETMAA--RGIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70
Query: 135 M--RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY---------- 182
M R TP++VTY TL+ GYC+ +V+ + L+KE+ G+ P+A++Y
Sbjct: 71 MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKS 130
Query: 183 -------------------------NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
NT+I G E +++ +VTY
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTY 190
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ G CKAG L+ A ++L+ M + G P Y+ F K GKV +A + +M +
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFD 336
S + P+ +TY+ +L LCK K+D A+++ ++M GC +++ + ++ LC++ +
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EA + E M R G P +T+ L + K G
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 139/285 (48%), Gaps = 3/285 (1%)
Query: 101 LDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR 159
+D++ P V +N L+NG+ + D ER M + PNVV+Y L+EG C+L R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 160 VDRAIRLVKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
A LV++M G P+ + Y+T++ G +AG+ EE +++ + P + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T ++ CK+ L A ++L+ MI G P+ T+N + +E A +L + M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
SG D +TY+ L+ LCK +L A Q+ + MK GC D+ + ++ LC+ K
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
A E M P+ +T+ + D K G A ++ M+S
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KA A LL PD V+ +FV + ++G V A E + D
Sbjct: 197 LCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGL---CKSGKVLNAHQVLEQMRDSD- 252
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
D + +LD LCK G++ A E + D V Y+ +++G +
Sbjct: 253 ---HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD-GCGLNVVGYSTVVDGLCKLGR 308
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
++A M + P+VVTY +LV G C+ +++ A+ V+EM EG +PNA+ Y +
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 185 VIDGLVEAGRFEEVSGMMERFLV-------CEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
++ GL GR E M+E C P ++ TY +L+ G CKAG ++ A K
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPP--SVSTYNALIGGLCKAGRIDDALKFF 426
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+ M S+G P +Y+ ++ G+ A
Sbjct: 427 QRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 173/349 (49%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI+ G V+ A+ F + L + + F + L++ +CK G
Sbjct: 127 PDTVTLNT---LIKGLCLKGQVKKAL---HFHDKL-LAQGFQLNQVSYATLINGVCKIGD 179
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+AA ++ RK + P V +YN +++ + + V +A + EM + ++ +VVTY
Sbjct: 180 TRAAIKFL--RKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTY 237
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C + ++ AI L+ EM + I PN YN ++D L + G+ +E ++ L
Sbjct: 238 NTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY++L+ GY +++ A + M G P TY F K V++
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDE 357
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+NL+++M + P +TY L+ LCK ++ + EM+ RG D+ T + LI
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLID 417
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ D A A F M + + P+ TF L D K G AQ++
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 6/317 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G ++ AI N ++K + + IL+D+LCK+G+VK A
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLL----NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
L P V Y+ L++G+F VK A+ + M VTP+V TY L+ G+
Sbjct: 292 L--AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + VD A+ L KEM ++ + P + Y+++IDGL ++GR V +++ +
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADV 409
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY+SL+ G CK G L+ A + M + P+ T+ K G+++DA +++
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ GY + TY++++ CK+ L+ A+ + +M+ GC + T +I L + +
Sbjct: 470 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529
Query: 335 FDEASAEFEDMIRRGLV 351
D+A MI RGL+
Sbjct: 530 NDKAEKLLRQMIARGLL 546
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 164/354 (46%), Gaps = 11/354 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTF-EFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD V +T + + +Y +V A F E A VK + + L+ C G
Sbjct: 197 PDVVMYNTIIDAMCKYQ---LVSEAYGLFSEMA-----VKGISADVVTYNTLIYGFCIVG 248
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++K A ++ + ++ P V YNIL++ + VK+A+ M K V P+V+T
Sbjct: 249 KLKEAIGLLNEM--VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL++GY + V +A + M G+ P+ Y +I+G + +E + +
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY+SL+ G CK+G + ++ M RG TY+ K G ++
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ L+ KM + P+ T+ ILL LCK +L A +V +++ +G +++ T ++I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ C+ +EA M G +P+ TF+ + K+ A+KL M
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 6/297 (2%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + +N +L+ + + K+ A + + + P+++T L+ +C + ++
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G P+ + NT+I GL G+ ++ ++ L V+Y +L+ G C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K GD A K L+ + R P YN K+ V +A L+ +M G + D +
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ L+ C KL AI + EM + + ++ T +L+ LC+ K EA + M
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 346 IRRGLVPHYLTFKRLND------EFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
++ + P +T+ L D E KK A L V V L++ CK+
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 115/258 (44%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+NV DA + M TP ++ + +++ + +++ A+ L + +GI+P+ I
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I+ G+ ++ + L P VT +L+KG C G ++ A +++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+GF + +Y K G A+ RK+ PD + Y+ ++ +CK +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + EM +G D+ T LI+ C + K EA +M+ + + P+ T+ L D
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 363 EFKKRGMTALAQKLCNVM 380
K G A+ + VM
Sbjct: 278 ALCKEGKVKEAKSVLAVM 295
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%)
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
+++++F V+DA++ + +M+ +TP + ++ +L K A+ +S
Sbjct: 25 SSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHR 84
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ +G DL T +LI+ C M + + +++RG P +T L
Sbjct: 85 LELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 19/404 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEF 58
+ +A+ K++D L+L G E+ + + D T I+I Y R + A
Sbjct: 76 LCSAVARTKQYD----LVLGFCKGMEL-NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A L ++ F L++ C +GRV A + E+ Q P + + L+NG
Sbjct: 131 AWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR--PDLVTVSTLING 184
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
V +A M + P+ VTYG ++ C+ A+ L ++M + I+ +
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ VID L + G F++ + + +VTY+SL+ G C G + +K+L+
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI R +P T++ F K GK+ +A LY +MI G PD +TY+ L+ CKE+
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A Q+ M +GC+ D+ T ++LI+ C+ + D+ F ++ +GL+P+ +T+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS--VPRSME----LLDSRCKD 396
L F + G A++L M S VP S+ LLD C +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 169/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ ++ R ++G A+ F +N + + I++DSLCK G
Sbjct: 208 PDEV---TYGPVLNRLCKSGNSALALDLFRKMEE----RNIKASVVQYSIVIDSLCKDGS 260
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A F++ + + V Y+ L+ G D + EM N+ P+VVT+
Sbjct: 261 FDDALSLFNEMEM--KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++ + + ++ A L EM GI P+ I YN++IDG + E + M + +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY+ L+ YCKA ++ ++ + + S+G +P+ TYN F + GK+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L+++M+ G P +TY ILL LC +L+ A+++ ++M+ + + ++IH
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C K D+A + F + +G+ P +T+ + K+G + A L
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 11/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L ++D +L + IG + +PD V TF LI + + G ++EA E
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVV---TFSALIDVFVKEGKLLEAK----ELY 338
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + + + + L+D CK+ + A++ F + + P + Y+IL+N +
Sbjct: 339 NEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGCEPDIVTYSILINSY 395
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V D R + E+ + + PN +TY TLV G+C+ +++ A L +EM G+ P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y ++DGL + G + + E+ + Y ++ G C A ++ A +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P TYN K G + +A L+RKM E G TPD TY+IL++
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L ++++ +EMK G D T M+I +L
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PT +N L + R+K F M + ++ T ++ YCR +++ A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ K G EP+ I ++T+++G GR E +++R + + P +VT ++L+ G C
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++ M+ GF P TY K G A++L+RKM E +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK+ D A+ + EM+ +G D+ T + LI LC K+D+ + +MI
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
R ++P +TF L D F K G A++L N M + P ++ L+D CK+
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G+V+ + + + E + P PT + + L + + K M G
Sbjct: 44 NGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
T + + K+ A ++ + + GY PD +T+ L+ C E ++ A+ +
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 307 SK---EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
EMK R DL T + LI+ LC + EA + M+ G P +T+ + +
Sbjct: 163 VDRMVEMKQRP---DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 364 FKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
K G +ALA L N+ +SV + ++DS CKD
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 197/398 (49%), Gaps = 25/398 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIK+L + + + A C+LLD + VP +D FV+LI Y +AG+V+ ++ F+
Sbjct: 156 MIKMLGEVSKLNHARCILLD-MPEKGVP--WDEDMFVVLIESYGKAGIVQESVKIFQKMK 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L + + S SLF+++L ++GR A YF+K + + PT YN++L G+F
Sbjct: 213 DLGVERTIKSYNSLFKVIL----RRGRYMMAKRYFNKM--VSEGVEPTRHTYNLMLWGFF 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S ++ A RF+ +M+ ++P+ T+ T++ G+CR +++D A +L EM+ I P+ +
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVV 326
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G + R ++ + E P TY++L+ G C AG + A ILK M
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 241 ISRGFLPSPTTYNYFFRYF---SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ P + F + SK G + A + + M + Y +L++ CK
Sbjct: 387 MAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 444
Query: 298 DKLDLAIQ-----VSKEMKCRGCD-IDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRG 349
+ AI+ + KE+ R D ++++ S +I LC + +A F +++RG
Sbjct: 445 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPR 385
V L K G + ++ +MS VPR
Sbjct: 505 -VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPR 541
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 130/270 (48%), Gaps = 7/270 (2%)
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
L+M ++ V + + L+E Y + V ++++ ++M+ G+E YN++ ++
Sbjct: 174 LDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRR 233
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR+ + + PT TY ++ G+ + LE A + + M +RG P T+
Sbjct: 234 GRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATF 293
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N F +F K+++A L+ +M + P ++Y ++K D++D +++ +EM+
Sbjct: 294 NTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS 353
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT-FKRLNDEFKKRGMTA 371
G + + T + L+ LC K EA ++M+ + + P + F +L K G A
Sbjct: 354 SGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMA 413
Query: 372 LAQKLCNVMSSVPRSME------LLDSRCK 395
A ++ M+++ E L++++CK
Sbjct: 414 AATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 162/391 (41%), Gaps = 28/391 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ D A L ++ G P VS + +I+ Y V+ + FE
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS---YTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ + A+ + LL LC G++ A + + + AP ++ LL
Sbjct: 353 S----SGIEPNATTYSTLLPGLCDAGKMVEAKNIL--KNMMAKHIAPKDNSIFLKLLVSQ 406
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ ++ A M NV YG L+E C+ +RAI+L+ + ++ I
Sbjct: 407 SKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRH 466
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
EP+A YN +I+ L G+ + ++ R L+ +L++G+ K G+
Sbjct: 467 QDTLEMEPSA--YNPIIEYLCNNGQTAKAE-VLFRQLMKRGVQDQDALNNLIRGHAKEGN 523
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ + +ILK+M RG Y + + G+ DA M+E G+ PD +
Sbjct: 524 PDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRS 583
Query: 290 LLKILCKEDKLDLAIQVSKEM--KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+++ L ++ ++ A +V M K G + ++D ++ L +EA + + +
Sbjct: 584 VIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQ 643
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
G H L ++G T A KL +
Sbjct: 644 NG---HTADLDSLLSVLSEKGKTIAALKLLD 671
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
Y +L+ + DA+ M ++ P+ + +++E RV A R++ M
Sbjct: 545 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIM 604
Query: 171 --RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+ GIE N + +++ L+ G EE G ++ L+ + G T SL+ + G
Sbjct: 605 IDKNVGIEDNMDLIAKILEALLMRGHVEEALGRID--LLNQNGHT-ADLDSLLSVLSEKG 661
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A K+L + R ++Y+ GK +A ++ K++E G + D +
Sbjct: 662 KTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSD 721
Query: 289 ILLKILCKEDKLDLAIQVSKEMK 311
L+K L +E A +S+ +K
Sbjct: 722 ELIKSLNQEGNTKQADVLSRMIK 744
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 9/352 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD ++ F LI + +G V A F N + K F+ + L+D CK G
Sbjct: 247 VPDSIA---FSALICGLSGSGKVVEADKLF----NEMIKKGFEPDEVTYTALIDGYCKLG 299
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+K A +F + + P V Y L +G +S + A EM ++ + N+ T
Sbjct: 300 EMKKA--FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T+V G C+ + +A++L++EM++ G+ P+ I Y T++D + G + ++ L
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREML 417
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT+VT+ L+ G C +G LE ++LK M+ +G +P+ TYN + + +
Sbjct: 418 DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMR 477
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ +YR M G PD TY+IL+K CK + A + KEM + ++ + LI
Sbjct: 478 ISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALI 537
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ K EA FE+M R GLV + D + G +LC+
Sbjct: 538 KGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCD 589
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 37/317 (11%)
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +L W YNIL+N FR +++A + M + P+VV+Y T+++GY
Sbjct: 98 FSEFPQLGVCW--NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + + + ++LVKEM+ +G++PN Y+++I L ++G+ E ++ + P
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215
Query: 215 VTYTSLVKGYCKAGDLEG-----------------------------------ASKILKM 239
V YT+L+ G+CK G+ + A K+
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +GF P TY + K G+++ A L+ +M++ G TP+ +TY L LCK +
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD A ++ EM +G +++ T +++ LC+ +A E+M GL P +T+
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 360 LNDEFKKRGMTALAQKL 376
L D + K G A++L
Sbjct: 396 LMDAYYKTGEMVKAREL 412
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 171/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V + LI + + G +AA F ++V DS A F L+ L G+
Sbjct: 213 PDHV---IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP--DSIA--FSALICGLSGSGK 265
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + F++ + + + P Y L++G+ + +K A +M + +TPNVVTY
Sbjct: 266 VVEADKLFNEM--IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L +G C+ +D A L+ EM ++G++ N YNT+++GL +AG + +ME
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE 383
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +TYT+L+ Y K G++ A ++L+ M+ RG P+ T+N GK+ED
Sbjct: 384 AGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLED 443
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L + M+E G P+ TY+ ++K C + + ++ ++ + M +G D +T +LI
Sbjct: 444 GERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIK 503
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ EA ++M+ + ++ L F KR A++L
Sbjct: 504 GHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQL 552
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 181/375 (48%), Gaps = 15/375 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS + +I Y G ++ + + + N + +S+ ILL LCK G
Sbjct: 142 IPDVVS---YTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSI--ILL--LCKSG 194
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V + R+ + + P +Y L++G+ + N + A + + EM + P+ +
Sbjct: 195 KVVEGEKVL--REMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIA 252
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ G +V A +L EM K+G EP+ + Y +IDG + G ++ + + +
Sbjct: 253 FSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMV 312
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTYT+L G CK+G+L+ A+++L M +G + +TYN K G +
Sbjct: 313 QIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNIL 372
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ L +M E+G PD +TY L+ K ++ A ++ +EM RG + T +L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---V 383
+ LC K ++ + M+ +G++P+ T+ + ++ R ++ ++ M + V
Sbjct: 433 NGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV 492
Query: 384 PRSME---LLDSRCK 395
P S L+ CK
Sbjct: 493 PDSNTYNILIKGHCK 507
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 148/319 (46%), Gaps = 48/319 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI Y + G ++ A F +N + + L D LCK G
Sbjct: 283 PDEV---TYTALIDGYCKLGEMKKAF----FLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 88 VKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ A+E H+ RK L + + YN ++NG ++ N+ A + EM++ + P+ +
Sbjct: 336 LDTANELLHEMCRKGLQLN----ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE-------- 197
TY TL++ Y + + +A L++EM G++P + +N +++GL +G+ E+
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM 451
Query: 198 -----------VSGMMERFLV--------------CEPG--PTMVTYTSLVKGYCKAGDL 230
+ +M+++ + C G P TY L+KG+CKA ++
Sbjct: 452 LEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM 511
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + K M+ + F + ++YN + F K K+ +A L+ +M G Y++
Sbjct: 512 KEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLF 571
Query: 291 LKILCKEDKLDLAIQVSKE 309
+ + +E ++ +++ E
Sbjct: 572 VDMNYEEGNMETTLELCDE 590
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D+ K G + A E R+ LD+ PTV +N+L+NG S ++D ER
Sbjct: 393 YTTLMDAYYKTGEMVKARELL--REMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ + PN TY ++++ YC + + + + M +G+ P++ YN +I G +A
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + T +Y +L+KG+ K L A ++ + M G + S YN
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNL 570
Query: 255 FFRYFSKFGKVEDAMNLYRKMIE 277
F + G +E + L + IE
Sbjct: 571 FVDMNYEEGNMETTLELCDEAIE 593
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 12/230 (5%)
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL----VCEPGPTMVTYTSL 220
RL+ + G +P+ V++ LVEAG E ++ L G + T L
Sbjct: 27 RLIYTYKDWGSDPH--VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCL 84
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
K L K+ G + +YN + GK+ +A +L +M G
Sbjct: 85 SS---KRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGC 141
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD ++Y ++ C +L +Q+ KEM+ +G +L T + +I LLC+ K E
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEK 201
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM 387
+M++RG+ P ++ + L D F K G T A KL + M + VP S+
Sbjct: 202 VLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSI 251
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 184/372 (49%), Gaps = 16/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L A+ +D L + + VP+ V TF +L+R + R GMVE AI + +
Sbjct: 252 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEV---TFDMLVRFFCRGGMVERAIQVLQQMS 308
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +L I+++++CKQGRV A ++ + P Y +L G
Sbjct: 309 QHGCTPN----TTLCNIVINAICKQGRVDDAYDFLNNMGMY--GCNPDTISYTTVLRGLC 362
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A+ EM ++N PN VT+ T + C+ +++AI+L++ M + G +
Sbjct: 363 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV 422
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
YN ++ G GR V +E F L CE P +TYT+L+ G C A L+ A+++L
Sbjct: 423 TYNALVHGFCVQGR---VDSALELFNNLPCE--PNTITYTTLLTGLCHAERLDAAAELLA 477
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI + + T+N +F + G VE+AM L +M+E G TP+ +T++ LL + K+
Sbjct: 478 GMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A+++ + +G +D T + ++ +L R + +EA + G+ P +
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 597
Query: 359 RLNDEFKKRGMT 370
++ KR T
Sbjct: 598 KILFALCKRCET 609
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 17/346 (4%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLCKQGRVKAASEY 94
LIR R G A A SGA + + L+ C+ GR+ AA
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEA--------SGAPVDVFAYNTLVAGYCRYGRLDAA--- 128
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+R P Y ++ G V DA +M + P+VVTY L+E
Sbjct: 129 --RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAV 186
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ A+ ++ EMR +G PN + YN +I+G+ GR ++ ++ R P +
Sbjct: 187 CKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDI 246
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+YT+++KG C A + + M+ + +P+ T++ R+F + G VE A+ + ++
Sbjct: 247 VSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQ 306
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G TP+ +I++ +CK+ ++D A M GC+ D + T ++ LCR +
Sbjct: 307 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++ A +M+R+ P+ +TF ++G+ A KL +M
Sbjct: 367 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 170/381 (44%), Gaps = 13/381 (3%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
+ + D+A L + G V F + L+ Y R G ++AA L
Sbjct: 87 RGRTSDAARVLRTAEASGAPVDVF----AYNTLVAGYCRYGRLDAA-------RRLIASM 135
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
A + ++ LC +GRV A L + P+V Y +LL +S
Sbjct: 136 PVPPDAYTYTPIIRGLCDRGRVGDALALLDDM--LQRGCQPSVVTYTVLLEAVCKSSGFG 193
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A EMR + TPN+VTY ++ G CR RVD A ++ + G +P+ + Y TV+
Sbjct: 194 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
GL A R+++V + + + P VT+ LV+ +C+ G +E A ++L+ M G
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ T N K G+V+DA + M G PD ++Y +L+ LC+ + + A ++
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 373
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM + C + T I +LC+ ++A E M G +T+ L F
Sbjct: 374 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 433
Query: 367 RGMTALAQKLCNVMSSVPRSM 387
+G A +L N + P ++
Sbjct: 434 QGRVDSALELFNNLPCEPNTI 454
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP V + L+ R DA R +V Y TLV GYCR R+D A R
Sbjct: 71 APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARR 130
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ M + P+A Y +I GL + GR + +++ L P++VTYT L++ C
Sbjct: 131 LIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVC 187
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K+ A +L M ++G P+ TYN + G+V+DA + ++ G+ PD +
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIV 247
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y +LK LC + D + EM + C + T ML+ CR + A + M
Sbjct: 248 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 307
Query: 346 IRRGLVPHYLTFKRLNDEFKKRG 368
+ G P+ + + K+G
Sbjct: 308 SQHGCTPNTTLCNIVINAICKQG 330
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 142/304 (46%), Gaps = 9/304 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F++L+ C+ G V+ A + + + P + NI++N + V DA F
Sbjct: 284 FDMLVRFFCRGGMVERAIQVLQQMSQ--HGCTPNTTLCNIVINAICKQGRVDDAYDFLNN 341
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+ ++Y T++ G CR R + A L+ EM ++ PN + +NT I L + G
Sbjct: 342 MGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL 401
Query: 195 FEEVSGMMERFLVCEPGPT--MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
E+ ++E L+ E G + +VTY +LV G+C G ++ A ++ + P+ TY
Sbjct: 402 IEQAIKLIE--LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITY 456
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+++ A L MI+ + +T+++L+ C++ ++ A+++ +M
Sbjct: 457 TTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 516
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
GC +L T L+ + + +EA ++ +G+ +T+ + D + T
Sbjct: 517 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEE 576
Query: 373 AQKL 376
A ++
Sbjct: 577 AIQM 580
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 16/357 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I + K D A+ L+ +G + PD +S + ++R RAG E A
Sbjct: 322 VINAICKQGRVDDAY-DFLNNMGMYGCNPDTIS---YTTVLRGLCRAGRWEHAKELLP-- 375
Query: 60 NNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+MV KN F + LC++G ++ A + E S + YN L++G
Sbjct: 376 ---EMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG--IVTYNALVHG 430
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ V A + + E PN +TY TL+ G C R+D A L+ M ++ N
Sbjct: 431 FCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLN 487
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A+ +N ++ + G EE ++ + + P ++T+ +L+ G K + E A ++L
Sbjct: 488 AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 547
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
++S+G TY+ S+ + E+A+ + + + G P Y+ +L LCK
Sbjct: 548 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRC 607
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ D AI M GC + T +LI L EA ++ +G++ L
Sbjct: 608 ETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 664
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 18/347 (5%)
Query: 25 HEVPDF---VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
H++ DF S+ +V ++ + A F+F N+ + + ASL +L+ +
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLA---FKFYKNMREIGLPPTVASL-NVLIKA 165
Query: 82 LCKQ-GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
LC+ G V A + F + + + P Y L++G R + +A++ + EM +++
Sbjct: 166 LCRNDGTVDAGLKIFLEMPK--RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P VVTY +L+ G C + VD A+R ++EM+ +GIEPN Y++++DGL + GR +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ E + P MVTYT+L+ G CK ++ A ++L M +G P Y F
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-------LCKEDKLDLAIQVSKEMKCR 313
K +A N +MI G TP+RLT++I +K LC + A + M+ R
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSR 402
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G ++++T L+ LC+ +F +A ++++ G +P T+K L
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K AE + M+ EN + ++ GY R+ R ++R+ +M+ +P+ Y TV
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTV 127
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA-GDLEGASKILKMMISRG 244
+ LVE + + PT+ + L+K C+ G ++ KI M RG
Sbjct: 128 LAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 187
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TY +FG++++A L+ +M+E P +TY L+ LC +D A+
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ +EMK +G + ++ T + L+ LC+ + +A FE M+ RG P+ +T+
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY------- 300
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELLD 391
T L LC + ++ELLD
Sbjct: 301 -----TTLITGLCK-EQKIQEAVELLD 321
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 47/417 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+IK LA +K D A C L +K+ P+ V+ + +I +AG +E + FE
Sbjct: 369 VIKGLADSKRIDEA-CELFEKLKTAGCSPNVVA---YTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ V + + +++D LCK + A + F + + + P Y L++G+
Sbjct: 425 SGSSCVPT----RTTYTVVIDGLCKAQMLPDACKVFEQM--VQKGCVPDTITYTTLIDGF 478
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE--- 176
++ + +A + M + P VTYG++V G+C+L ++ A ++ +MR+ G E
Sbjct: 479 SKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGL 538
Query: 177 --------------------------------PNAIVYNTVIDGLVEAGRFEEVSGMMER 204
P+ I+Y ++ID L GR E + +
Sbjct: 539 FIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDS 598
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P +TY ++++ + K G++E A +IL++M G P YN + K +
Sbjct: 599 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 658
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG-CDIDLDTST 323
V+ A +Y +M+ SG P+ +T+++L+ L K+ K D A + KEM + L + T
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+LI L + + EA ++F++MI RG++P T+ L K G A+KL M
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 775
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 138/262 (52%), Gaps = 1/262 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V NI+LNG +++ + A +LEM P +V+Y T++ G + ++D A +
Sbjct: 18 PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M G EP+ I + T+I G +AG+ +V M+ + P + YTS++ GYCK
Sbjct: 78 FNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFRPDVFLYTSVIHGYCK 136
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AGDL+ KIL+ M++ G +P Y K G+V++A L+ +M +SG D +T
Sbjct: 137 AGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVT 196
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L++ L KLD A ++ +EM RG + L+ LI LC+ K DEA+ ++ ++
Sbjct: 197 FMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVV 256
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
+ + + + L D + K G
Sbjct: 257 AKKVATSRVAYNSLMDGYCKLG 278
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 15/375 (4%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K D LLL + PD T+ IL+ ++RA ++ A+ F+ ++
Sbjct: 276 KLGRVDDGLKLLLQMVECDNFPDI---QTYNILVAGFSRANRLDDALELFKLLSSYGCKP 332
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N A+ + ++ L R++ A +F + A V Y ++ G SK +
Sbjct: 333 N----AATYTTIIQGLYDAQRMEEAKAFFDE--------ALDVISYTTVIKGLADSKRID 380
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A + +++ +PNVV Y +++G + R++ ++ ++M P Y VI
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVI 440
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DGL +A + + E+ + P +TYT+L+ G+ KA ++ A K+L +M+++G
Sbjct: 441 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ TY F K + +A + +M E G P + LL + + + A QV
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM RGC D+ T LI LL + EA F+ MI +G P LT+ + F K
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 620
Query: 367 RGMTALAQKLCNVMS 381
G A ++ +M+
Sbjct: 621 IGNVEAAGEILELMA 635
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 184/442 (41%), Gaps = 65/442 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--- 57
+I KA + D+ + +L + + +PD + + +LI + G V+ A FE
Sbjct: 130 VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAA---YFVLIDPLCKLGRVDEAYELFERMR 186
Query: 58 ----------FANNLDMVKN---FDSGASLF---------------EILLDSLCKQGRVK 89
F ++ + N D L+ + L+ +LCK G+V
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A+E + + + A + YN L++G+ + V D + L+M + + P++ TY
Sbjct: 247 EANEIYQTV--VAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNA-----------------------------I 180
LV G+ R R+D A+ L K + G +PNA I
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVI 364
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVI GL ++ R +E + E+ P +V YT+++ G KAG +E K + M
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+P+ TTY K + DA ++ +M++ G PD +TY L+ K K+
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ M +G + T ++H C++ +EA M RG P F L
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ +G A ++ M++
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTA 566
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 153/302 (50%), Gaps = 5/302 (1%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+ G +F LL +GR + A + + + AP V +Y L++ F + V +A
Sbjct: 535 EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA--RGCAPDVILYTSLIDLLFSTGRVPEA 592
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ M ++ P+ +TYGT+++ + ++ V+ A +++ M K G+ P+ YN+++DG
Sbjct: 593 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 652
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
V+ R ++ G+ +R + P VT+ L+ G K G + A + K M+ + +P
Sbjct: 653 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP- 711
Query: 249 PT--TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
PT +Y K G+V +A + +++MI+ G P+ TY L+ L K ++ A ++
Sbjct: 712 PTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 771
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++M G + D+ + LI L D A F++M++RG P+ +T+K L F+
Sbjct: 772 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRA 831
Query: 367 RG 368
G
Sbjct: 832 AG 833
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 163/346 (47%), Gaps = 18/346 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KA++ D A L L+ P VS +T + + + M EA ++F N++
Sbjct: 30 LCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDK--MDEA----YKFFNSM-- 81
Query: 65 VKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+G F L+ CK G+ + ++ + + P V +Y +++G+
Sbjct: 82 ---IDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL---KRFRPDVFLYTSVIHGYC 135
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ ++ + EM P+ Y L++ C+L RVD A L + MRK G + +
Sbjct: 136 KAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYV 195
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ T+I+ L G+ +E + + P + SL+ CKAG ++ A++I + +
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV 255
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++ S YN + K G+V+D + L +M+E PD TY+IL+ + ++L
Sbjct: 256 VAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRL 315
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
D A+++ K + GC + T T +I L + +EA A F++ +
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL 361
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI--LLDSLCKQGRVKAAS 92
T+ +I+ +++ G VEAA L+++ G F L+D K RV A
Sbjct: 610 TYGTIIQNFSKIGNVEAA------GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 663
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGTLV 151
+ + + P +N+L++G F+ A + EM K+ V P +V+Y L+
Sbjct: 664 GVYDRM--VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G + RV A +EM GI P Y ++I L +AGR E ++E +
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + Y++L+ G + ++ A + + M+ RG P+ TY R F G+ D
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-----VCEPGPTM 214
++ A+ +KEM G+ P+ + N V++GL +A + ++ +E FL CE PT+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKA---IELFLEMPSMGCE--PTI 55
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y +++ G ++ A K MI G P + F K G+ + L +
Sbjct: 56 VSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ 115
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ + PD Y ++ CK LD ++ +EM GC D +LI LC++ +
Sbjct: 116 ALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGR 174
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DEA FE M + G + Y+TF L + G
Sbjct: 175 VDEAYELFERMRKSGCLGDYVTFMTLIEALSNHG 208
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAAS 92
TF +L+ + G + A F+ +M++ + +L + IL+D L K GRV S
Sbjct: 680 TFNVLMHGLFKDGKTDRAFSLFK-----EMLEKDEVPPTLVSYTILIDGLGKAGRV---S 731
Query: 93 EYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E F + +E+ D+ P Y L+ ++ + +A++ +M K V P+V Y L+
Sbjct: 732 EAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 791
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
G VD A + +EM K G PN + Y + G AGR ++ + + F
Sbjct: 792 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 845
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+E+A++ ++M +G PD + +I+L LCK K+D AI++ EM GC+ + +
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+I L + K DEA F MI G P + F L F K G + L N
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLN 114
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 184/371 (49%), Gaps = 24/371 (6%)
Query: 15 WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS- 73
W L++ G S + ++ +I +AG+ A+ F N ++ D G
Sbjct: 135 WATNLEEFGH-------SPEPYMEMIDLAGKAGLAAEAVHAF---NRME-----DYGCKP 179
Query: 74 ---LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
F +++ SL K+ R A +F L + P V VY L++GW R+ N+ +AER
Sbjct: 180 DKIAFSVVISSLSKKRRAIEAQSFF---DSLKDRFEPDVVVYTSLVHGWCRAGNISEAER 236
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ EM+ + PNV TY +++ CR ++ RA + EM G +PNAI +N ++ V
Sbjct: 237 VFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHV 296
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+AGR E+V + + P +TY L++ +C+ +LE A KIL + +G + +
Sbjct: 297 KAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNAS 355
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
++N F SK G V A ++ KM + P+ +TY+IL+++ + D+ +++ KEM
Sbjct: 356 SFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEM 415
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTFKRLNDEFKKRGM 369
+ + +T +LI C + ++ A + F++MI + L P ++ + + +K G
Sbjct: 416 DENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQ 475
Query: 370 TALAQKLCNVM 380
++L M
Sbjct: 476 LKKHEELVEKM 486
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+R + +AG E + + L + A + L++S C+ ++ A +
Sbjct: 287 TFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPD----AITYNFLIESHCRDDNLEEAVKI 342
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K+ A + +N + + +V A R + +M+ PN VTY L+ +
Sbjct: 343 LNSVKKGCNLNASS---FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMF 399
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-GPT 213
+ D ++L KEM + IEPNA Y +I G + + + + P+
Sbjct: 400 ADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPS 459
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ Y +++ KAG L+ ++++ M++RGF+ P
Sbjct: 460 LPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 495
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
F SP Y K G +A++ + +M + G PD++ + +++ L K+ + A
Sbjct: 142 FGHSPEPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQ 201
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+K R + D+ T L+H CR EA F +M G+ P+ T+ + D
Sbjct: 202 SFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDAL 260
Query: 365 KKRGMTALAQKLCNVMSSV 383
+ G A + + M V
Sbjct: 261 CRSGQITRAHDVFSEMIDV 279
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 179/380 (47%), Gaps = 9/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I LA+ + ++A L + PD V+ ++ LI Y + GM+ A+ FE
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNS---LIDGYGKVGMLTGAVSVFEEMK 313
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L++ CK R+ A EY H K+ + P V Y+ L++ +
Sbjct: 314 D----AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ--RGLQPNVVTYSTLIDAFC 367
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + +A +F+++M + + PN TY +L++ C++ ++ A +L EM++ G+ N +
Sbjct: 368 KAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIV 427
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL E GR E + L YTSL GY KA +E A IL+ M
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P Y + ++ED+M + R+M++ G T + Y L+ K K
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKT 547
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A+ + +EM+ G I + T +LI LC++ +A F+ M R GL P+ + + L
Sbjct: 548 TEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTAL 607
Query: 361 NDEFKKRGMTALAQKLCNVM 380
D K A+ L N M
Sbjct: 608 IDGLCKNDCLEEAKNLFNEM 627
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 2/278 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LLD LC+ GR++ A E F L W ++Y L +G+ ++K ++ A E
Sbjct: 429 YTALLDGLCEDGRMREAEELFGAL--LKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEE 486
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+N+ P+++ YGT + G CR ++ ++ +++EM G+ N+ +Y T+ID + G+
Sbjct: 487 MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGK 546
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E +++ T+VTY L+ G CK G ++ A + M G P+ Y
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K +E+A NL+ +M++ G +PD+L Y L+ K A+ + M G
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
++DL T LI R + A + ++M+R+G++P
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIP 704
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
G +F+ L + L G ++ A + F K + P VR N LL+ +S A
Sbjct: 180 GFGVFDTLFNVLVDLGMLEEARQCFWKMNKF--RVLPKVRSCNELLHRLSKSSKGGLALS 237
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ +M ++P+V TY ++ R ++ A L +EM+ +G+ P+ + YN++IDG
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G + E P ++TY SL+ +CK + A + L M RG P+
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ F K G + +A + MI G P+ TY L+ CK L+ A ++ EM
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ G ++++ T T L+ LC + EA F +++ G
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 14/308 (4%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+++ + L Y +A M+E A+ E N KN L+ + LC+Q ++
Sbjct: 459 LNQQIYTSLFHGYIKAKMMEKAMDILEEMNK----KNLKPDLLLYGTKIWGLCRQNEIED 514
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ R+ +D +Y L++ +F+ +A EM+ + VVTYG L
Sbjct: 515 SMAVI--REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVL 572
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++G C++ V +A+R M + G++PN ++Y +IDGL + EE + L
Sbjct: 573 IDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGI 632
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + YTSL+ G K G+ A + M+ G Y FS++G+V+ A +
Sbjct: 633 SPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKS 692
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC---DIDLDTSTML-- 325
L +M+ G PD++ LL+ + ++ A+ + +M RG ID+ + L
Sbjct: 693 LLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTA 752
Query: 326 ---IHLLC 330
+H LC
Sbjct: 753 VTKLHKLC 760
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 121/291 (41%)
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR ++F P V++ L N +++A + + +M K V P V
Sbjct: 158 GREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVR 217
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+ L+ + + A+ K+M G+ P+ YN VI L G E + E
Sbjct: 218 SCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM 277
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P +VTY SL+ GY K G L GA + + M G P TYN F KF ++
Sbjct: 278 KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERI 337
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A M + G P+ +TY L+ CK L A + +M G + T T L
Sbjct: 338 PQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSL 397
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
I C++ +EA +M + G+ + +T+ L D + G A++L
Sbjct: 398 IDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEEL 448
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 6/290 (2%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
NILLN + R + A F +M K P++VT+G+L+ G+CR R+ A+ + M +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G EPN ++YNT+IDGL ++ + + ++ R V P VTY SL+ G C +G +
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A++++ M R P T+N K G++ +A LY +MI PD +TY +L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +LD A Q+ M +GC D+ T ++LI+ C+ K + F +M +RG+V
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCKD 396
+ +T+ L + + G +A+++ C V ++ LL C +
Sbjct: 360 NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL+ C+ R+ A F + E+ + P V +YN +++G +SK V +A
Sbjct: 154 FGSLLNGFCRGDRIYDALYMFDRMVEM--GYEPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+ VTY +L+ G C R D A R+V M K I P+ +N +ID V+ GR
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + E + P +VTY+ L+ G C L+ A ++ M+S+G P TY+
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K KVE M L+ +M + G + +TY +L++ C+ KL++A ++ K M G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG 391
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T +L+H LC K ++A DM + G+ +T+ + K G A A
Sbjct: 392 VPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 375 KL 376
L
Sbjct: 452 DL 453
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 148/285 (51%), Gaps = 2/285 (0%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
ILL+ C+ ++ A + K +L P + + LLNG+ R + DA + M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHE--PDIVTFGSLLNGFCRGDRIYDALYMFDRM 177
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ PNVV Y T+++G C+ ++VD A+ L+ M +GI P+A+ YN++I GL +GR+
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
++ + M+ E P + T+ +L+ K G + A ++ + MI R P TY+
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ ++++A ++ M+ G PD +TY IL+ CK K++ +++ EM RG
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T T+LI CR K + A F+ M+ G+ P+ +T+ L
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVL 402
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 173/354 (48%), Gaps = 12/354 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSL 82
GHE PD V TF L+ + R + A++ F+ MV+ ++ ++ ++D L
Sbjct: 146 GHE-PDIV---TFGSLLNGFCRGDRIYDALYMFD-----RMVEMGYEPNVVIYNTIIDGL 196
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK +V A + + R E+D P YN L++G S DA R M K + P
Sbjct: 197 CKSKQVDNALDLLN-RMEVD-GIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYP 254
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V T+ L++ + R+ A L +EM + ++P+ + Y+ +I GL R +E M
Sbjct: 255 DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMF 314
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P +VTY+ L+ GYCK+ +E K+ M RG + + TY + + +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRA 374
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GK+ A +++ M+ G P+ +TY++LL LC K++ A+ + +M+ G D D+ T
Sbjct: 375 GKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTY 434
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++I +C+ + +A + + +GL P T+ + K+G+ A L
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADAL 488
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 139/298 (46%), Gaps = 23/298 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV----PDFVSKDTFVILIRRYARAGMVEAAIWTF 56
+I L K+K+ D+A LD + EV PD V+ ++ + +G+ + W
Sbjct: 192 IIDGLCKSKQVDNA----LDLLNRMEVDGIRPDAVTYNSLI--------SGLCNSGRWDD 239
Query: 57 EFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYN 113
M K F L+D+ K+GR+ A E + + R+ LD P + Y+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD----PDIVTYS 295
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+L+ G + +AE+ + M + P+VVTY L+ GYC+ ++V+ ++L EM +
Sbjct: 296 LLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G+ N + Y +I G AG+ + + + C P ++TY L+ G C G +E A
Sbjct: 356 GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKA 415
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
IL M G TYN R K G+V DA +LY + G TPD TY ++
Sbjct: 416 LVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ ++ LL+ + K W +M+ + N+ T L+ +CR ++ A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + + ++++G R + M +R + P +V Y +++ G CK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ ++ A +L M G P TYN G+ +DA + M + PD T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
++ L+ KE ++ A ++ +EM R D D+ T ++LI+ LC + DEA F M+
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+G P +T+ L + + K KL MS
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
Y +L R + D+ + M + P++ + L+ ++++ D I L ++M+
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
GI N N +++ + + + + P +VT+ SL+ G+C+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A + M+ G+ P+ YN K +V++A++L +M G PD +TY+ L+
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC + D A ++ M R D+ T LI + + EA +E+MIRR L
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288
Query: 352 PHYLTFKRL 360
P +T+ L
Sbjct: 289 PDIVTYSLL 297
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%)
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
I + SR + Y R ++ K++D+++L+ M++ P + LL +
Sbjct: 33 ICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K K D+ I + ++M+ G +L T +L++ CR + A + M++ G P +
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIV 152
Query: 356 TFKRLNDEF 364
TF L + F
Sbjct: 153 TFGSLLNGF 161
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 174/372 (46%), Gaps = 20/372 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCKQGRVKA 90
TF I IR RAG ++ A + +D D+G + +L+D+LC G++
Sbjct: 264 TFTICIRILGRAGKIDEA---YGILKRMD-----DAGCGPDVVTYTVLIDALCNAGKLNN 315
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E F K K S P Y LL+ + ++ + FW EM + P+VVT+ L
Sbjct: 316 AKELFLKMKA--SSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTIL 373
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++ C++ +VD A + M+K+G+ PN YNT+I GL+ R +E +
Sbjct: 374 IDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
T TY + Y K+G+ A K + M + G +P+ N ++ G++E+A
Sbjct: 434 ETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKE 493
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ + + G PD +TY+IL++ K ++D AI++ EM+ GCD ++ LI L
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLY 553
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM 387
+ + DEA F+ M L P +T+ L K G A L M + P ++
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTI 613
Query: 388 E---LLDSRCKD 396
LLD CK+
Sbjct: 614 SFNTLLDCLCKN 625
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 151/301 (50%), Gaps = 5/301 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSW--APTVRVYNILLNGWFRSKNVKDAERFWLEM 135
L+ LCK G+ A F K L +S+ P++ YN L++G +++ + A + +M
Sbjct: 758 LVKFLCKHGKAVDAYNVFLK---LTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM 814
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ TP+V TY ++ + ++ L +EM G +PN I +N VI GLV++
Sbjct: 815 KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSL 874
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
++ + + + PT TY L+ G K G LE A + + M+ G +P+ YN
Sbjct: 875 DKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNIL 934
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K G VE A L+R+M++ G PD +Y I++ LC K+D A+ +E+K G
Sbjct: 935 MNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGL 994
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D DL ++I+ L R + +EA + F++M RG+ P T+ L GM A K
Sbjct: 995 DPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGK 1054
Query: 376 L 376
+
Sbjct: 1055 M 1055
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 4/301 (1%)
Query: 62 LDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L + K+F SL + L+D L K + A F+K K + P V YN+ L+
Sbjct: 776 LKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMK--NAGCTPDVFTYNLFLDAL 833
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S +K+ + EM PN +T+ ++ G + +D+AI L ++ P
Sbjct: 834 GKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTP 893
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +IDGL++ GR EE E L P Y L+ G+ K GD+E A ++ +
Sbjct: 894 WTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRR 953
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G P +Y+ GKV+DA++ + ++ SG PD + Y++++ L + +
Sbjct: 954 MVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQR 1013
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A+ + EM+ RG DL T LI L +EA +E++ +GL P+ T+
Sbjct: 1014 VEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNA 1073
Query: 360 L 360
L
Sbjct: 1074 L 1074
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 167/392 (42%), Gaps = 45/392 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + ++A L L PD V T++ L+ +++ G ++A EF +
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRV---TYITLLDKFSDHGDLDA---IKEFWS 356
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + F IL+D+LCK G+V A K+ Q AP + YN L+ G
Sbjct: 357 EME-ADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKK--QGVAPNLHTYNTLICGLL 413
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + +A + M + TY ++ Y + +AI+ ++M+ GI PN +
Sbjct: 414 RLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIV 473
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N + L E GR EE C P +TY L++ Y KAG ++ A K+L M
Sbjct: 474 ACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM 533
Query: 241 ISRG-----------------------------------FLPSPTTYNYFFRYFSKFGKV 265
G P+ TYN K G+V
Sbjct: 534 EENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRV 593
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++A L++ MI P+ ++++ LL LCK ++DLA+++ M C D+ T +
Sbjct: 594 QEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTV 653
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
I+ L + + + A F M ++ + P Y+T
Sbjct: 654 IYGLIKENRVNYAFWLFHQM-KKVIYPDYVTL 684
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 126/276 (45%), Gaps = 9/276 (3%)
Query: 109 VRVYNILLNGW---------FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR 159
+R +LNG+ +S ++A + + M E + P++ TY L+ + R
Sbjct: 183 MRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRD 242
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
++ + L++EM G+ PN + I L AG+ +E G+++R GP +VTYT
Sbjct: 243 IETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTV 302
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ C AG L A ++ M + P TY FS G ++ + +M G
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
Y PD +T+ IL+ LCK K+D A MK +G +L T LI L R+ + DEA
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
F M GL T+ D + K G + A K
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 8/323 (2%)
Query: 32 SKDTFVILIR-RYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
S +T++ + + Y R G+ EA + E + V N S L +LL K G +
Sbjct: 156 SINTYLTIFKVLYIRGGLREAPV-ALEKMRKVGFVLNGYSYIGLIHLLL----KSGFCRE 210
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + + R+ + + P+++ Y+ L+ + ++++ EM + PN+ T+
Sbjct: 211 ALKVY--RRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTIC 268
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ R ++D A ++K M G P+ + Y +ID L AG+ + +
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P VTY +L+ + GDL+ + M + G+LP T+ K GKV++A
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFG 388
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
M + G P+ TY+ L+ L + ++LD A+++ M+ G + T + I
Sbjct: 389 TLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYG 448
Query: 331 RMYKFDEASAEFEDMIRRGLVPH 353
+ + +A FE M G+VP+
Sbjct: 449 KSGESGKAIKTFEKMKTNGIVPN 471
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ + LD+L K G++K + + + L + P +NI++ G +S ++ A + +
Sbjct: 826 YNLFLDALGKSGKIKELFDLYEEM--LFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + +P TYG L++G +L R++ A + +EM G PN +YN +++G + G
Sbjct: 884 LMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD 943
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + R + P + +Y+ +V C G ++ A + + G P YN
Sbjct: 944 VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ +VE+A++L+ +M G TPD TY+ L+ L ++ A ++ +E++ +G
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ ++ T LI D A A ++ M+ G P+ TF +L ++
Sbjct: 1064 LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQ 1112
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 176/439 (40%), Gaps = 94/439 (21%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L +AKEF + L K G PD + T+ IL+R Y +AG V+ AI +M
Sbjct: 488 LEEAKEFFNG----LKKCG--LAPDAI---TYNILMRCYGKAGRVDDAIKLLS-----EM 533
Query: 65 VKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+N D + L+D+L K RV A + F + KE+ APTV YN LL G +
Sbjct: 534 EENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEM--KLAPTVVTYNTLLAGLGKEG 591
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V++A + M ++ PN +++ TL++ C+ VD A++++ M + P+ + YN
Sbjct: 592 RVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYN 651
Query: 184 ----------------------------------TVIDGLVEAGRFEEVSGMMERFL--- 206
T++ G+++ GR E+ + + F+
Sbjct: 652 TVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHV 711
Query: 207 ------------------------------------VCEPGPTMVTYTSLVKGYCKAGDL 230
+CE ++ LVK CK G
Sbjct: 712 GDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLI---PLVKFLCKHGKA 768
Query: 231 EGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A + LK+ S PS YN K E A L+ KM +G TPD TY++
Sbjct: 769 VDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNL 828
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L L K K+ + +EM RGC + T ++I L + D+A + D++
Sbjct: 829 FLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGD 888
Query: 350 LVPHYLTFKRLNDEFKKRG 368
P T+ L D K G
Sbjct: 889 FSPTPWTYGPLIDGLLKLG 907
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 24/351 (6%)
Query: 27 VPDFVSKDTF-VILIRRYARAGMVEAAIW-----------TFEFANNLDMVKNFDSGASL 74
V FV + +F V++++R + M ++ F F N++ +
Sbjct: 65 VCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTET 124
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+L+ L RV+ F+ ++ Q ++ Y + + +++A +
Sbjct: 125 CNYVLEMLRAHRRVEDMVVVFNLMQK--QIIKRSINTYLTIFKVLYIRGGLREAPVALEK 182
Query: 135 MRKENVTPNVVTYGTLVE-----GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
MRK N +Y L+ G+CR A+++ + M EGI+P+ Y+ ++ L
Sbjct: 183 MRKVGFVLNGYSYIGLIHLLLKSGFCR-----EALKVYRRMVSEGIKPSLKTYSALMVAL 237
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ E V G+++ P + T+T ++ +AG ++ A ILK M G P
Sbjct: 238 GKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDV 297
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY GK+ +A L+ KM S + PDR+TY LL LD + E
Sbjct: 298 VTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSE 357
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M+ G D+ T T+LI LC++ K DEA + M ++G+ P+ T+ L
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 9/325 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ + AW L PD T+ + + ++G ++ +E
Sbjct: 794 LIDGLLKARLTEMAWGLFYKMKNAGCTPDVF---TYNLFLDALGKSGKIKELFDLYEEM- 849
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + I++ L K + A + ++ D ++PT Y L++G
Sbjct: 850 ---LFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGD--FSPTPWTYGPLIDGLL 904
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +++A++F+ EM PN Y L+ G+ + V+ A L + M KEGI P+
Sbjct: 905 KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ ++D L G+ ++ E + P +V Y ++ G ++ +E A + M
Sbjct: 965 SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+RG P TYN G VE+A +Y ++ G P+ TY+ L++
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTML 325
D A V K+M GC + T L
Sbjct: 1085 DRAYAVYKKMMVGGCRPNTGTFAQL 1109
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 8/325 (2%)
Query: 48 MVEAAIWTFEFANNLDMVK-----NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD 102
+VE+ + + +F N LD+ K F ++ + + K G +K A E F K
Sbjct: 37 IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKR-- 94
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ P V VYN+L+ G + K ++DAE+ + EM N+ PN VT+ TL++GYC+ VD
Sbjct: 95 RKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDV 154
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
AI L + M+KE +EP+ I +N+++ GL +A R EE M+ P TY+ +
Sbjct: 155 AIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFD 214
Query: 223 GYCKAGDLEGAS-KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G K+ D GA+ + + I +G T + K GKVE A + + ++E G
Sbjct: 215 GLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLV 274
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P + Y+ ++ C+ +D AI ++M+ RG + +I C M D+A
Sbjct: 275 PGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEW 334
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKK 366
+ M+ +G+ P T+ L D + +
Sbjct: 335 VKKMVGKGIAPSVETYNILIDGYGR 359
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 166/362 (45%), Gaps = 9/362 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +T+ ILI Y R + E N S SL ++ LCK G++ A
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSL----INCLCKDGKILEA 401
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
R + + P +YN+L++G +++A RF+ EM K + +VTY +L+
Sbjct: 402 EMVL--RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLI 459
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C++ ++ A + + G P+ I YN++I G AG ++ + E
Sbjct: 460 KGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLK 519
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+ T+ L+ G K G ++ + M+ P YN + + G V+ A +L
Sbjct: 520 PTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSL 578
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++M++ G PD TY+ L+ KE KL + +MK +G + DT ++LI C
Sbjct: 579 QKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCD 638
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
+ F+ A + +M+ G +P+ L+ +K G AQ +C+ M + M+ LD
Sbjct: 639 LKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEM--IANGMDNLD 696
Query: 392 SR 393
+
Sbjct: 697 TN 698
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 10/334 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP V +T V Y + G ++ AI T E + + N + F ++D C+
Sbjct: 274 VPGEVIYNTIV---NGYCQIGDMDRAILTIEQMESRGLRPNCIA----FNSVIDKFCEMQ 326
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E+ +K + + AP+V YNIL++G+ R + EM + PNV++
Sbjct: 327 MIDKAEEWV--KKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVIS 384
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
YG+L+ C+ ++ A ++++M G+ PNA +YN +IDG G+ E +
Sbjct: 385 YGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMS 444
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
G T+VTY SL+KG CK G L+ A ++ ++ S G P TYN +S G +
Sbjct: 445 KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQ 504
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+ LY M + G P T+H L+ C ++ + L + EM D +I
Sbjct: 505 KCLELYETMKKLGLKPTINTFHPLIS-GCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMI 563
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
H +A + ++M+ G+ P T+ L
Sbjct: 564 HCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSL 597
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 156/376 (41%), Gaps = 41/376 (10%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ V TF LI Y +AG V+ AI E + + F LL LCK
Sbjct: 133 VPNRV---TFNTLIDGYCKAGEVDVAIGLRERMKK----EKVEPSIITFNSLLSGLCKAR 185
Query: 87 RVKAA-------------------SEYFHKRKELDQSWAPTVRVY--------------- 112
R++ A S F + D + +Y
Sbjct: 186 RIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTC 245
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+ILLNG + V+ AE + + + P V Y T+V GYC++ +DRAI +++M
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G+ PN I +N+VID E ++ +++ + P++ TY L+ GY +
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
+IL+ M G P+ +Y K GK+ +A + R M+ G P+ Y++L+
Sbjct: 366 CFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLID 425
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C KL A++ EM G + T LI LC+M K EA F + G P
Sbjct: 426 GSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP 485
Query: 353 HYLTFKRLNDEFKKRG 368
+T+ L + G
Sbjct: 486 DVITYNSLISGYSNAG 501
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 140/293 (47%), Gaps = 4/293 (1%)
Query: 78 LLDSLCKQGRVKA-ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
+L S+C + ++ + SE + ++ + P+ +++ SK + + EM
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQ--EGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMV 58
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
P+ + YG + +L + A+ L + M++ + PN VYN +I GL + R
Sbjct: 59 GLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIR 118
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + V P VT+ +L+ GYCKAG+++ A + + M PS T+N
Sbjct: 119 DAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLL 178
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK-EDKLDLAIQVSKEMKCRGC 315
K ++E+A + ++ +G+ PD TY I+ L K +D A+ + +E +G
Sbjct: 179 SGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGV 238
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
ID T ++L++ LC+ K ++A + ++ GLVP + + + + + + G
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIG 291
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL LC + R + A E + P V Y ++NG+F+ ++ A + E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVVTY +++ C+ + +D+A+ ++ M K G+ PN YN+++ G +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G +++ P +VTY SL+ CK G A K+ M RG P TTY
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++ G + + L M+ +G P+ + IL+ K+ K+D A+ V +M+ +G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ D T +I +LC+ + ++A FE MI L P + + L
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 5/297 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ S C GR+ + + + + + LL G K DA L
Sbjct: 94 YGILIGSCCCAGRLDLG--FAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR 151
Query: 135 -MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG--IEPNAIVYNTVIDGLVE 191
M + PNV +Y L++G C R A+ L++ M +G P+ + Y TVI+G +
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G ++ G L P +VTY+S++ CKA ++ A ++L M+ G +P+ T
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + G+ ++A+ +KM G PD +TY+ L+ LCK + A ++ M
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
RG ++ T L+ E + M+R G+ P++ F L + K+G
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 9/281 (3%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSL 82
GG PD VS + +I + + G ++ A T+ + ++ N + +S+ + +L
Sbjct: 192 GGDCPPDVVS---YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI----IAAL 244
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK + A E + P R YN +++G+ S K+A F +M + V P
Sbjct: 245 CKAQAMDKAMEVL--TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVTY +L++ C+ R A ++ M K G++P Y T++ G G E+ G++
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P ++ L+ Y K G ++ A + M +G P TY K
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G+VEDAM + +MI+ +P + Y+ L+ LC DK D A
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 9/317 (2%)
Query: 71 GASLFEI--LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
GAS++ + L + + A S Y + P + Y IL+ + +
Sbjct: 51 GASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLG 110
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVID 187
+ K+ + + + L++G C +R A+ +V + M + G PN YN ++
Sbjct: 111 FAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLK 170
Query: 188 GLVEAGRFEEVSGMMERFLVCEPG----PTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
GL + R +E +++ ++ + G P +V+YT+++ G+ K GDL+ A M+ R
Sbjct: 171 GLCDENRSQEALELLQ--MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G LP+ TY+ K ++ AM + M+++G P+ TY+ ++ C + A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
I K+M G + D+ T L+ LC+ + EA F+ M +RGL P T+ L
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 364 FKKRGMTALAQKLCNVM 380
+ +G L ++M
Sbjct: 349 YATKGALVEMHGLLDLM 365
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 5/248 (2%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ VTPN+ TYG L+ C R+D + + K+G +AI + ++ GL R +
Sbjct: 85 DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144
Query: 198 VSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYN 253
++ R + + G P + +Y L+KG C + A ++L+MM G P +Y
Sbjct: 145 AMDIVLRRMT-QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K G ++ A Y +M++ G P+ +TY ++ LCK +D A++V M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + T ++H C + EA + M G+ P +T+ L D K G A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 374 QKLCNVMS 381
+K+ + M+
Sbjct: 324 RKMFDSMT 331
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ C G+ K A + K P V YN L++ ++ +A + +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHS--DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K + P + TYGTL++GY + L+ M + GI PN V++ +I + G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P VTY +++ CK+G +E A + + MI P YN
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 255 FFRYFSKFGKVEDAMNLYRK 274
F K + A + + K
Sbjct: 450 LIHSLCIFDKWDKAKDYFLK 469
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 172/355 (48%), Gaps = 18/355 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T L++ + A F L + N + A+L + LC+ G +K A E
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMK----GLCQSGNIKIALE- 619
Query: 95 FHKRKELDQS-----WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
HK D S P Y+I+++G + +A + EM+ V P+V++Y +
Sbjct: 620 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 679
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ G+CR + A L EM G++P+ ++ +ID L + G+ E + ++E +
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P VTYT+LVKG C + A+++ M G LP TY + + G ++ A+
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799
Query: 270 NLYRKMIE------SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
L++KM+ + + PD ++Y I++ LCK + D A ++ KEMK G ++ + T
Sbjct: 800 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 859
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT--ALAQKL 376
LIH CR K ++A F +M+ +G+ + +T+ + F K G AL QK+
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALFQKM 914
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 19/301 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC + R+ A+ F ++L P Y L+ G ++ N+ A + E
Sbjct: 92 YSTLIKGLCMEHRISEATWLFMSMQKL--GCRPDAITYGTLMKGLCQTGNINIALQLHQE 149
Query: 135 MRKEN------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P +++Y +++G C+ RR D A L KEM+ +G+ P+ I Y ++I G
Sbjct: 150 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 209
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
+G++E+ + L P + T L+ +CK G + A+++L++M+ RG +
Sbjct: 210 FCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILD 269
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TY+ + ++ +A L+ M + G PD + Y L+K LC+ K+++A+ + +
Sbjct: 270 IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 329
Query: 309 EM---------KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
EM KC D+ TS+MLI +LC+ K EA+ E MI+RG + +T+
Sbjct: 330 EMLNDTSQYGIKCI--RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 387
Query: 360 L 360
L
Sbjct: 388 L 388
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 160/315 (50%), Gaps = 14/315 (4%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ LC + R+ A++ F K ++L P V L+ G +S N+K A M
Sbjct: 569 LVKGLCMKHRISKATQLFLKMQKL--GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 626
Query: 138 E------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ N PN ++Y +++G C+ R D A L KEM+ G+ P+ I Y ++I G
Sbjct: 627 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR 686
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+G++++ + + P + T++ L+ CK G + A+++L++MI RG +P+ T
Sbjct: 687 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 746
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y + ++ +A L+ KM + G PD +TY L+K LC+ + A+++ K+M
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 312 CR----GCDI--DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
G + D+ + +++I LC+ + DEA F++M G++P+ +++ L F
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 866
Query: 366 KRGMTALAQKLCNVM 380
+ G A+ L N M
Sbjct: 867 RSGKLEDAKHLFNEM 881
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 151/316 (47%), Gaps = 15/316 (4%)
Query: 75 FEILLDSLCKQGRVK---AASEYFHKRKELDQ----SWAPTVRVYNILLNGWFRSKNVKD 127
F IL++ LC RV AA +R + S P V ++L++ + V +
Sbjct: 13 FNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIE 72
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A M + ++VTY TL++G C R+ A L M+K G P+AI Y T++
Sbjct: 73 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 132
Query: 188 GLVEAGRFEEVSGMMERFLVCEPG-------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
GL + G ++ + + ++ + G PT+++Y+ ++ G CK + A ++ K M
Sbjct: 133 GLCQTGNIN-IALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM 191
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++G +P +Y F GK E A L+ +M++ G PD T +L+ + CKE K+
Sbjct: 192 KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKV 251
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A ++ + M RGC +D+ T + LI LC ++ EA+ F M + G P + + L
Sbjct: 252 IEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTL 311
Query: 361 NDEFKKRGMTALAQKL 376
+ G +A L
Sbjct: 312 MKGLCQTGKINIALHL 327
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 47/345 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D LCK R A E F + K Q P V Y L++G+ S + A+ + E
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKA--QGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 518
Query: 135 MRKENVTPNV-----------------------------------VTYGTLVEGYCRLRR 159
M + P+V VT TLV+G C R
Sbjct: 519 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHR 578
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--------CEPG 211
+ +A +L +M+K G PN + T++ GL ++G + + + L C+P
Sbjct: 579 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
++Y+ ++ G CK G + A ++ K M + G +P +Y F + GK +DA L
Sbjct: 639 A--ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ +M++ G PD T+ +L+ +LCKE K+ A ++ + M RGC + T T L+ LC
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ EA+ F M + G +P +T+ L + G A +L
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 801
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 158/353 (44%), Gaps = 49/353 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC + R+ A+ F ++L P Y L+ G ++ N+ A + E
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKL--GCRPDAITYGTLMKGLCQTGNINIALQLHQE 442
Query: 135 MRKEN------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P +++Y +++G C+ RR D A L +EM+ +GI P+ I Y T+I G
Sbjct: 443 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502
Query: 189 LVEAGRFEEVSGMMERFL-----------------VCEPGPTM----------------- 214
+G++E+ + L +C+ G +
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562
Query: 215 -VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VT T+LVKG C + A+++ M G +P+ T + + G ++ A+ L++
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622
Query: 274 KMIE--SGY----TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
M+ S Y P+ ++Y I++ LCK + D A ++ KEMK G D+ + T LIH
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
CR K+ +A F +M+ G+ P TF L D K G A +L VM
Sbjct: 683 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM 735
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 169/378 (44%), Gaps = 62/378 (16%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D LCK R A E F + K Q P V Y L++G+ S + A+ + E
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKA--QGMMPDVISYTSLIHGFCHSGKWEKAKCLFNE 225
Query: 135 MRKENVTPNV-----------------------------------VTYGTLVEGYCRLRR 159
M + P+V VTY TL++G C R
Sbjct: 226 MLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL--VCEPG-----P 212
+ A +L M+K G P+AI Y T++ GL + G+ + + L + G P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ T + L+ CK G + A+++L++MI RG + TY+ + ++ +A L+
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM---------KCRGCDIDLDTST 323
M + G PD +TY L+K LC+ +++A+Q+ +EM KC+ L + +
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP---TLISYS 462
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN----- 378
++I LC+ + DEA FE+M +G++P +++ L F G A+ L N
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522
Query: 379 -VMSSVPRSMELLDSRCK 395
+ V S L+D CK
Sbjct: 523 GIQPDVTTSSVLIDMLCK 540
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI---------LLKIL 294
G P T+N +V + + ++ GY PD +TY I L+ IL
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CKE K+ A ++ + M RGC +D+ T + LI LC ++ EA+ F M + G P
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
+T+ L + G +A +L
Sbjct: 125 ITYGTLMKGLCQTGNINIALQL 146
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 94/244 (38%), Gaps = 62/244 (25%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY---------FFRYFSKF 262
P T+ L+ C + + ++ RG++P TY+ K
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 263 GKVEDAMNLYRKMIESGYT-----------------------------------PDRLTY 287
GKV +A L MI+ G PD +TY
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 288 HILLKILCKEDKLDLAIQVSKEM---------KCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
L+K LC+ +++A+Q+ +EM KC+ L + +++I LC+ + DEA
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP---TLISYSIIIDGLCKDRREDEA 184
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN------VMSSVPRSMELLDS 392
F++M +G++P +++ L F G A+ L N + V S L+D
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244
Query: 393 RCKD 396
CK+
Sbjct: 245 FCKE 248
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG--CDI-------DLDTSTMLIHL 328
+G PD T++IL+ LC +++ + + RG DI D+ TS+MLI +
Sbjct: 4 AGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDI 63
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LC+ K EA+ E MI+RG + +T+ L
Sbjct: 64 LCKEGKVIEANELLEVMIQRGCILDIVTYSTL 95
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 185/388 (47%), Gaps = 21/388 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ VL + ++F++ +L+++G ++ +TF I I+ +A A + A+ F+
Sbjct: 244 MMCVLGRTRQFET-MVAMLEEMGEK---GLLTMETFSIAIKAFAEAKQRKKAVGIFDLMK 299
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F G + LLDSL K A F K K+ + P+++ Y ILL+GW
Sbjct: 300 KY----GFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKD---RFTPSLQTYTILLSGWC 352
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R KN+ +A R W EM P+VV + ++EG + ++ AI+L + M+ +G PN
Sbjct: 353 RLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVR 412
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLV-----CEPGPTMVTYTSLVKGYCKAGDLEGASK 235
Y +I + E +E F V C+P + YT L+ G+ + ++
Sbjct: 413 SYTIMIQDFCKQKLMGEA---IEYFDVMVDRGCQPDAAL--YTCLITGFGRQKKMDMVYS 467
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+LK M RG P TYN + + +DA+ +Y+KMI+SG P TY++++K
Sbjct: 468 LLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYF 527
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
++ ++ EM +GC D ++ + I L R + EA E+M+ +G+ L
Sbjct: 528 VTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPKL 587
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ + + K G + ++L M+ V
Sbjct: 588 DYNKFASDISKTGNAVILEELARKMNFV 615
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 38/347 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL LC + + + A+E H E + P V Y+ +++G+F+ +V A + +
Sbjct: 87 YSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCK 146
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDR-------------------------------- 162
M + PNVVT ++++G C+++ +D+
Sbjct: 147 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 206
Query: 163 ---AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A+R++KEM ++G PN + YN +ID L ++G E + + P P TY S
Sbjct: 207 WTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGS 266
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GY G+L + + +M+ G + T++ + K G++++A + KM + G
Sbjct: 267 LLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLG 326
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ PD +TY ++ LCK +LD A+ +M G ++ T T LIH K+++A
Sbjct: 327 FMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAE 386
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRS 386
F +M+ RG+ P F + D K G AQKL ++M PR+
Sbjct: 387 ELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLM---PRA 430
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 165/399 (41%), Gaps = 60/399 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A +L I H +P+ T+ LI Y +G A+ + +
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCT---TYNSLIHGYLSSGQWTEAVRILKEMS 218
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + +L+D LCK G A E F+ + P Y LL+G+
Sbjct: 219 RDGQRPNVVT----YNMLIDCLCKSGFHAEAREIFNSM--IQSGPKPDATTYGSLLHGYA 272
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
N+ + M + + N T+ + YC+ R+D A +M++ G P+ +
Sbjct: 273 TEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIV 332
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL-VCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
Y TVIDGL + GR ++ M RF + + G P ++T+T+L+ G+ G E A ++
Sbjct: 333 TYTTVIDGLCKIGRLDDA---MSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELF 389
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ RG P T + K GKV +A L+ M +G P+ ++Y+ ++
Sbjct: 390 YEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIH----- 444
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+A +V + MK +DM+ GL P +TF
Sbjct: 445 -GYFIAGEVGEVMKL-----------------------------LDDMLLIGLKPTAVTF 474
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
L D GM ++ K V L+DS C+D
Sbjct: 475 NTLLD-----GMVSMGLK-----PDVDTCKTLIDSCCED 503
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 120/295 (40%), Gaps = 38/295 (12%)
Query: 112 YNILLNGWFRSKNVKDAERFWLE-MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+ LL K DA L M + TP+V +Y TL++G C ++ + A L+ M
Sbjct: 51 FTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMM 110
Query: 171 RKE-------------------------------------GIEPNAIVYNTVIDGLVEAG 193
++ GI PN + N+VIDGL +
Sbjct: 111 AEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ 170
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ ++++ + P TY SL+ GY +G A +ILK M G P+ TYN
Sbjct: 171 AMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYN 230
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G +A ++ MI+SG PD TY LL E L V M
Sbjct: 231 MLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQN 290
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
G + T ++ I+ C+ + DEAS F M + G +P +T+ + D K G
Sbjct: 291 GMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L+ YA G + E N D MV+N S F I + + CK GR+ AS
Sbjct: 263 TYGSLLHGYATEGNL------VEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEAS 316
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++L + P + Y +++G + + DA + +M + ++PN++T+ TL+
Sbjct: 317 LTFIKMQQL--GFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIH 374
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G+ + ++A L EM GI P+ ++ +ID L + G+ E + + P
Sbjct: 375 GFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKP 434
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG--------- 263
+V+Y +++ GY AG++ K+L M+ G P+ T+N G
Sbjct: 435 NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCK 494
Query: 264 ----------KVEDAMNLYRKMIESGYTPDRLTYHILL 291
++ED + L+R+M+ D +T +I L
Sbjct: 495 TLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
V P++ T+G L+ C ++ + ++ K G+ +A+ + ++ L R +
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68
Query: 200 GMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYNYF 255
++ R + E G P + +Y++L+KG C E A++++ MM G P +Y+
Sbjct: 69 NIVLRRMP-ELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K G V A L+ KM++ G P+ +T + ++ LCK +D A V ++M
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ T LIH ++ EA ++M R G P+ +T+ L D K G A A++
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEARE 247
Query: 376 LCNVM-SSVPR 385
+ N M S P+
Sbjct: 248 IFNSMIQSGPK 258
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 185/390 (47%), Gaps = 27/390 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L +A + + A+ L + PD T+ ILI + +AG++E A F+
Sbjct: 294 VITFLCEAMKVEKAFLLFQEMKSVGVNPDVY---TYTILIDSFCKAGLIEQARSWFDEMR 350
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ N + + LL + K ++ AS+ F++ +D P Y+ L++G
Sbjct: 351 SIGCSANVVT----YTALLHAYLKAKQLPQASDIFNRM--IDAGCPPNTITYSALVDGLC 404
Query: 121 RSKNVKDA---------------ERFWLEMRK-ENVTPNVVTYGTLVEGYCRLRRVDRAI 164
++ ++ A F+ E + +++ PNVVTYG L++G C+ +V A
Sbjct: 405 KAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 464
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ M G EPN I+Y+ +IDG + G+ + + R C PT+ TYTSL+
Sbjct: 465 ELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAM 524
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
K L+ A K+L M+ P+ TY + G+ + A+ L M E G +P+
Sbjct: 525 FKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNV 584
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY L+ L K K+DL++Q+ +M +GC + T +LI+ C DEA + +
Sbjct: 585 VTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 644
Query: 345 MIRRGLVPHYLT-FKRLNDEFKKRGMTALA 373
M ++ P YL + + F K+ + +L
Sbjct: 645 M-KQTYWPKYLQGYCSVVQGFSKKFIASLG 673
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 182/394 (46%), Gaps = 25/394 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +FD A+ ++ +G VPD T+ +I A VE A F+ ++
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPD---TSTYSKVITFLCEAMKVEKAFLLFQEMKSV 317
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+ + + IL+DS CK G ++ A +F + + + S V Y LL+ + ++
Sbjct: 318 GV----NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCS--ANVVTYTALLHAYLKA 371
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K + A + M PN +TY LV+G C+ + +A + ++
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFY 431
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ I PN + Y +IDGL +A + + +++ L P + Y +L+ G+CK
Sbjct: 432 FEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCK 491
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G ++ A ++ M G+LP+ TY K +++ AM + +M+ES TP+ +T
Sbjct: 492 VGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVT 551
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LC+ + A+++ M+ +GC ++ T T LI L + K D + F M
Sbjct: 552 YTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMS 611
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G P+Y+T++ L + G+ A L + M
Sbjct: 612 TKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 645
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 164/335 (48%), Gaps = 18/335 (5%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M K F S + ++ LC+ +V+ A F + K + + P V Y IL++ + ++
Sbjct: 280 MGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN--PDVYTYTILIDSFCKAG 337
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ A ++ EMR + NVVTY L+ Y + +++ +A + M G PN I Y+
Sbjct: 338 LIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYS 397
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEP----------------GPTMVTYTSLVKGYCKA 227
++DGL +AG ++ + + + P +VTY +L+ G CKA
Sbjct: 398 ALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKA 457
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
+ A ++L M+S G P+ Y+ F K GK+++A ++ +M + GY P TY
Sbjct: 458 HKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTY 517
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L+ + K+ +LDLA++V +M C ++ T T +I LCR+ + +A M
Sbjct: 518 TSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEE 577
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+G P+ +T+ L D K G L+ +L MS+
Sbjct: 578 KGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST 612
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 7/287 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK G++ A E F + + + PTV Y L++ F+ + + A +
Sbjct: 481 IYDALIDGFCKVGKIDNAQEVFLRMSKC--GYLPTVHTYTSLIDAMFKDRRLDLAMKVLS 538
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + TPNVVTY +++G CR+ +A++L+ M ++G PN + Y +IDGL ++G
Sbjct: 539 QMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSG 598
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + + P VTY L+ C AG L+ A +L M + Y
Sbjct: 599 KVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYC 658
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ FSK K ++ L ++ G P Y +L+ K +L+ A+++ KEM
Sbjct: 659 SVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMEL 716
Query: 314 GCDIDL---DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+++ D T LI LC + ++A + ++ R+G+VP F
Sbjct: 717 SSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVF 763
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 175/428 (40%), Gaps = 45/428 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A FD A L +P+ V+ T + + + G + I
Sbjct: 113 MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRII------- 165
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL----DQSWAPTVRVYNILL 116
N+ M + + SLF L+ S C A +Y + K L D P YNI +
Sbjct: 166 NMMMKEGCNPNPSLFNSLVHSYCN------ARDYPYAYKLLKRMADCGCPPGYVAYNIFI 219
Query: 117 NGWFRSKNVKD------AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+ + AE+ + EM + N V C + + D A +++K M
Sbjct: 220 GSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVM 279
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+G P+ Y+ VI L EA + E+ + + P + TYT L+ +CKAG +
Sbjct: 280 MGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLI 339
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A M S G + TY + K ++ A +++ +MI++G P+ +TY L
Sbjct: 340 EQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSAL 399
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLD----------------TSTMLIHLLCRMYK 334
+ LCK ++ A +V ++ ++ D T LI LC+ +K
Sbjct: 400 VDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHK 459
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSME 388
+A + M+ G P+++ + L D F K G AQ++ C + +V
Sbjct: 460 VVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTS 519
Query: 389 LLDSRCKD 396
L+D+ KD
Sbjct: 520 LIDAMFKD 527
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 9/280 (3%)
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R ++S + + D + P+ YN L+ + + R EM + + T
Sbjct: 18 RACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFT 77
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
G + C+ R A+ +++ +E + + ++ +I GL+EA F+E + R
Sbjct: 78 VGCFAQALCKEGRWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMR 134
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +L+ G+ K L +I+ MM+ G P+P+ +N +
Sbjct: 135 CNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYP 194
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILC------KEDKLDLAIQVSKEMKCRGCDIDLD 320
A L ++M + G P + Y+I + +C D L LA +V +EM C ++
Sbjct: 195 YAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKV 254
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ LC M KFD A + M+ +G VP T+ ++
Sbjct: 255 NTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKV 294
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 38/241 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D LC+ G + A + +E + +P V Y L++G +S V + + +++
Sbjct: 552 YTAMIDGLCRIGECQKALKLLSMMEE--KGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQ 609
Query: 135 MRKENVTPNVVTYGTLV----------------------------EGYCRL-----RRVD 161
M + PN VTY L+ +GYC + ++
Sbjct: 610 MSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFI 669
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT---YT 218
++ L++E+ G P A VY +ID +AGR EE + + + + + YT
Sbjct: 670 ASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYT 729
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL++ C A LE A ++ + +G +P + + + K K +A+ L + +
Sbjct: 730 SLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDE 789
Query: 279 G 279
G
Sbjct: 790 G 790
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
+I L K+ + D + L + P++V T+ +LI AG+++ A
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV---TYRVLINHCCAAGLLDEAHSLLSEMK 646
Query: 53 --IW--------------TFEFANNLDMVKNFDSG-----ASLFEILLDSLCKQGRVKAA 91
W + +F +L +++ +S A ++ +L+D+ K GR++ A
Sbjct: 647 QTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEA 706
Query: 92 SEYFHKRKELDQSWAPTVR-VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E + EL S T + +Y L+ + ++ A + E+ ++ V P + + L
Sbjct: 707 LELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCL 766
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++G ++ + + A++L + EG+ + N DG
Sbjct: 767 IKGLIKVNKWNEALQLCYSICDEGVNWQS---NNSFDG 801
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 167/354 (47%), Gaps = 9/354 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD + T+ L+ RY +AG ++ A+W + + + L+D C+ G
Sbjct: 375 LPDVI---TYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLT----YNTLIDGYCRLG 427
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A K + ++Q P V Y IL+NG + +N+ A F+ EM + + P+
Sbjct: 428 DLAEARRL--KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFA 485
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T + L A +L + M +GI P+ + YN +IDGL + G ++ + + +
Sbjct: 486 YNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMV 545
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +TYT L+ +C+ G L A K+L M+S G PS TY + G +
Sbjct: 546 SDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLY 605
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A +RKM++ G P+ +TY++L+ LC + LA + EM RG + T T+LI
Sbjct: 606 SAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLI 665
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
CR + +A + +M + G+ P Y T L F + M + + N++
Sbjct: 666 DGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEGHMYHAIEYMENIV 719
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 3/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ L ++G ++ A + + ++ + T YN L+ V+ AE +E
Sbjct: 277 FNVVISFLAREGHLENAVKLVDSMRLSKKASSFT---YNPLITALLERGFVRKAEALQME 333
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E + P VVTY ++ G + + + A EMR G+ P+ I YN++++ +AG
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ PT++TY +L+ GYC+ GDL A ++ + M+ +G P TY
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + A + +M+ G PD Y+ + +A Q+ + M +G
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T ++I LC+ +A M+ GL P +T+ L +RG+ A+
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573
Query: 375 KLCNVMSS 382
KL N M S
Sbjct: 574 KLLNGMVS 581
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP VR N +L + D + EM + V P +VTY TL++ + + R D A
Sbjct: 199 APDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASM 258
Query: 166 LVKEMRKE--GIEPNAIVYNTVIDGLVEAGRFEE----------------------VSGM 201
L+KEM + G N + +N VI L G E ++ +
Sbjct: 259 LLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITAL 318
Query: 202 MERFLVCEPG------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ER V + PT+VTY +++ G K E A M + G LP
Sbjct: 319 LERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDV 378
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN + K G +++A+ L + +G P LTY+ L+ C+ L A ++ +E
Sbjct: 379 ITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEE 438
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
M +GC D+ T T+L++ ++ A F++M+ +GL P
Sbjct: 439 MVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQP 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A RLV G+ P+ N V+ L +A R+++V + L PT+VTY +L+
Sbjct: 189 AFRLVT---CHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLD 245
Query: 223 GYCKAGDLEGASKILKMMISR--GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ K G + AS +LK M ++ GF + T+N + ++ G +E+A+ L M S
Sbjct: 246 SFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKK 305
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
TY+ L+ L + + A + EM+ G + T +IH L + + + A
Sbjct: 306 A-SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+F +M GL+P +T+ L + + K G
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAG 392
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 3/142 (2%)
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+++ G P N R + +D +Y +M++ P +TY+ LL K
Sbjct: 190 FRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLK 249
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLD--TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
E + D A + KEM+ +G L+ T ++I L R + A + D +R
Sbjct: 250 EGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENA-VKLVDSMRLSKKASS 308
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
T+ L +RG A+ L
Sbjct: 309 FTYNPLITALLERGFVRKAEAL 330
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+K TF ILI + M+ A FE K + + L+D C + ++ A
Sbjct: 149 NKVTFTILIDGLCKKRMISEAWLVFETMTE----KGLEPDVYTYNALVDGYCSRSQMDEA 204
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F+ + AP VR YNIL+NG +S + +A+ EM +++TP++ TY TL+
Sbjct: 205 QKLFNIMDR--KGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLM 262
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G+C++ R A L+KEM G+ PN I Y+ V+DGL + G +E +++ +
Sbjct: 263 RGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + YT L++G C G LE A ++ + +G P+ TY K G +A L
Sbjct: 323 PNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+R+M +G P+ TY+++++ + A+++ +EM +G D T ML L
Sbjct: 383 FREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDL--- 439
Query: 332 MYKFDEASAEFEDMIRRG 349
E+S E RG
Sbjct: 440 -----ESSDEIISQFMRG 452
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 169/353 (47%), Gaps = 10/353 (2%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
GHE PD + T+ +I + G A+ + K + ++DSLC
Sbjct: 40 GHE-PDVI---TYSTIINGLCKMGNTTMALQLLKKMEE----KGCKPNVVAYNTIIDSLC 91
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K V A ++F + + + P V Y+ +L+G+ V +A + +M + NV PN
Sbjct: 92 KDRLVTEAMDFFSEM--VKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPN 149
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VT+ L++G C+ R + A + + M ++G+EP+ YN ++DG + +E +
Sbjct: 150 KVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFN 209
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P + +Y L+ G+CK+G ++ A +L M + P TY+ R F + G
Sbjct: 210 IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVG 269
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ ++A L ++M G P+ +TY I+L LCK LD A ++ K M+ + ++ T
Sbjct: 270 RPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYT 329
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+LI +C K + A F ++ +G+ P +T+ + K G++ A +L
Sbjct: 330 ILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L C GRV A+ F ++ ++++ P + IL++G + + + +A +
Sbjct: 118 YSSILHGFCNLGRVNEATSLF--KQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFET 175
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ + P+V TY LV+GYC ++D A +L M ++G PN YN +I+G ++GR
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G++ P + TY++L++G+C+ G + A ++LK M S G LP+ TY+
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +++A L + M ES P+ Y IL++ +C KL+ A ++ + +G
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T T++I L + +EA F +M G +P+ T+ + F + G T A
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV 415
Query: 375 KL 376
+L
Sbjct: 416 RL 417
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PT+ +N LL+G + DA + + EM K P+V+TY T++ G C++ A++L
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+K+M ++G +PN + YNT+ID L + E + P + TY+S++ G+C
Sbjct: 68 LKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN 127
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A+ + K M+ R +P+ T+ K + +A ++ M E G PD T
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ C ++D A ++ M +GC ++ + +LI+ C+ + DEA +M
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMS 247
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
+ L P T+ L F + G AQ+L M S +P + +LD CK
Sbjct: 248 HKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCK 302
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL LC + ++ A + F + ++ P V Y+ ++NG + N A + +
Sbjct: 13 FNTLLSGLCSKAKIMDAVKLFDEMVKMGHE--PDVITYSTIINGLCKMGNTTMALQLLKK 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ PNVV Y T+++ C+ R V A+ EM KEGI P+ Y++++ G GR
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + ++ + P VT+T L+ G CK + A + + M +G P TYN
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++++A L+ M G P+ +Y+IL+ CK ++D A + EM +
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T + L+ C++ + EA ++M GL+P+ +T+ + D K G
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 10/330 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++ + G V A F+ +++ N F IL+D LCK+ + A
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVERNVIPN----KVTFTILIDGLCKKRMISEAWLV 172
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F E + P V YN L++G+ + +A++ + M ++ PNV +Y L+ G+
Sbjct: 173 FETMTE--KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGH 230
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C+ R+D A L+ EM + + P+ Y+T++ G + GR +E +++ +C G P
Sbjct: 231 CKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKE--MCSYGLLP 288
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY+ ++ G CK G L+ A ++LK M P+ Y FGK+E A L+
Sbjct: 289 NLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELF 348
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+ G P +TY +++ L K + A ++ +EM GC + T ++I R
Sbjct: 349 SNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRN 408
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A E+M+ +G TF+ L+D
Sbjct: 409 GDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 122/247 (49%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K + P +VT+ TL+ G C ++ A++L EM K G EP+ I Y+T+I+GL + G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++++ P +V Y +++ CK + A M+ G P TY+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F G+V +A +L+++M+E P+++T+ IL+ LCK+ + A V + M +G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ D+ T L+ C + DEA F M R+G P+ ++ L + K G A+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 375 KLCNVMS 381
L MS
Sbjct: 241 GLLAEMS 247
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 168/341 (49%), Gaps = 6/341 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 57 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 112
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ L+ + ++ +NIL++ + + ++++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 113 --KEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 171 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 231 TFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 290
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 291 SMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 350
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+A +M+ GL P T+ + +EF K+G KL
Sbjct: 351 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 391
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 147/326 (45%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ S +F L+ + + G ++ A E + +E + W P +L
Sbjct: 40 FAVILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRKVL-E 97
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K K F+ E+ + ++ + L+ +C+ R + A + + K G+ P
Sbjct: 98 HLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRP 157
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G +E + P + TY+ L+ G CK ++ A+++
Sbjct: 158 SVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 217
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K G+V+ A+ +Y++M+ PD +TY+ L+ LCK+
Sbjct: 218 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKK 277
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + EM +G D T T LI C+ D A + MI+ + + +
Sbjct: 278 GDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 337
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L + G + A+K+ M SV
Sbjct: 338 TALISGLCQEGRSVDAEKMLREMLSV 363
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+VK F L+D CK GRV A E + ++ L QS P + YN L+ G +
Sbjct: 221 LVKGLVPNGVTFTTLIDGHCKNGRVDLALEIY--KQMLSQSLLPDLITYNTLIYGLCKKG 278
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++K A EM + + P+ +TY L++G C+ +D A K M +E I + + Y
Sbjct: 279 DLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYT 338
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+I GL + GR + M+ L P TYT ++ +CK GD+ SK+LK
Sbjct: 339 ALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 393
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 261 LPDLITYNT---LIYGLCKKGDLKQA---HDLIDEMSM-KGLKPDKITYTALIDGCCKEG 313
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E H+++ + ++ Y L++G + DAE+ EM + P+ T
Sbjct: 314 DLDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDART 371
Query: 147 YGTLVEGYCRLRRVDRAIRLVKE 169
Y ++ +C+ V + +L+KE
Sbjct: 372 YTMIINEFCKKGDVWKGSKLLKE 394
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 153/315 (48%), Gaps = 2/315 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + + + + SLC GRV A R + +P+V+ Y +++G FR+ +
Sbjct: 296 KGIEPTVYTYTVPISSLCDIGRVDDAINLV--RSMGKKGCSPSVQTYTAIISGLFRAGKM 353
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ A + +M KE + PN VTY L+ C R A+++ M G NA YN +
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I GL E+ + + L P PT+VTY +L+ K G L A++ L MM
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNC 473
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TY F K GK++ A + + +M++ G +P++ TY ++ CKE K+D+A+
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALS 533
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ + M+ GC ++T +I L + +F EA M +GL P+ +T+ L +
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593
Query: 366 KRGMTALAQKLCNVM 380
K T LA K+ + M
Sbjct: 594 KNTATNLAFKIFHEM 608
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL L K V +A + + P++ +N ++N + V++A + +
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQI--FSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + ++ P+ TY +L+ G+CR R++D+A + M K+G PN++ Y+T+I+GL GR
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E M+E PT+ TYT + C G ++ A +++ M +G PS TY
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTA 342
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ GK+E A+ +Y KM++ G P+ +TY+ L+ LC E + +A+++ M+ G
Sbjct: 343 IISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ T +I L M ++A F M++ G P +T+ L E KRG
Sbjct: 403 TLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 150/335 (44%), Gaps = 33/335 (9%)
Query: 75 FEILLDSLCKQGRVKAASEYFHK----------------------RKELDQSWA------ 106
F +++ LCK+G+V+ A F+K ++LD+++
Sbjct: 200 FNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259
Query: 107 -----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P Y+ L+NG + +A EM ++ + P V TY + C + RVD
Sbjct: 260 KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVD 319
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
AI LV+ M K+G P+ Y +I GL AG+ E GM + L P VTY +L+
Sbjct: 320 DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
C G A KI M G L + TYN + +E AM ++ KM++ G +
Sbjct: 380 NELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P +TY+ L+ K L+ A + MK C+ D T LI C+ K D A++
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSF 499
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F +M++ G+ P+ T+ + D + K G +A L
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 164/371 (44%), Gaps = 16/371 (4%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ +I RAG +E AI + +V N + L++ LC +GR A
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN----TVTYNALINELCTEGRFGIA 391
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F + + YN ++ G F +++ A + +M K+ +P VVTY TL+
Sbjct: 392 LKIFDWME--GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+ ++ A R + M++ EP+ Y +I G + G+ + + L C
Sbjct: 450 VENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGIS 509
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P TYT+++ GYCK G ++ A + + M G S TYN SK + +A
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
KM E G P+ +TY L+ LCK +LA ++ EM+ + C + T T LI+ LC+
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM--SSVPRSME- 388
K D A E + G P T+ L + G + A +L M + SME
Sbjct: 630 EGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEI 685
Query: 389 ---LLDSRCKD 396
LL + CK
Sbjct: 686 YCSLLVAHCKS 696
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 15/335 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + DSA + + P+ + T+ +I Y + G ++ A+ FE
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPN---QWTYTAMIDGYCKEGKIDVALSLFE--- 536
Query: 61 NLDMVKNFDSGA-SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M +N S + + ++ L K R A ++ K E Q P Y L+NG
Sbjct: 537 --RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE--QGLQPNTITYTSLINGL 592
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ A + + EM K+N PN TY +L+ G C+ +VD A RL + G EP
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTI 648
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y+T++ GL GR E S ++E P+M Y SL+ +CK+ ++ A +I +
Sbjct: 649 DTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNL 708
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +GF P Y + E+A+N+++ +++ + D + + +L+ L +E
Sbjct: 709 MAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
DL ++ M+ R C L T +L L ++ K
Sbjct: 769 SDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 33/330 (10%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+G + A+ + + KE + P R Y L++G+ + + A F+ EM K ++PN
Sbjct: 454 KRGYLNNATRFLYMMKE--SNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
TY +++GYC+ ++D A+ L + M + G + YN +I GL + RF E
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA 571
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P +TYTSL+ G CK A KI M + LP+ TY + G
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631
Query: 264 KVE-------------------------------DAMNLYRKMIESGYTPDRLTYHILLK 292
KV+ +A L M E G +P Y LL
Sbjct: 632 KVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLV 691
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
CK K+D A+++ M +G L +LI LC + + +EA F+ ++++
Sbjct: 692 AHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNS 751
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + L D + G + L K +M S
Sbjct: 752 DLIVWTVLVDGLLQEGDSDLCMKFLYLMES 781
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 116/231 (50%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
++ TL+ + V A + ++ G++P+ + +NT+I+ L + G+ +E + +
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P TYTSL+ G+C+ L+ A ++ M+ G P+ TY+ G++
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+AM++ +M E G P TY + + LC ++D AI + + M +GC + T T +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
I L R K + A + M++ GLVP+ +T+ L +E G +A K+
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKI 394
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
++N KF V A N+Y ++ SG P LT++ ++ ILCK+ K+ A+ V ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
D T T LI CR K D+A F+ M++ G P+ +T+ L + G
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 371 ALAQKLCNVMS 381
A + M+
Sbjct: 284 GEAMDMLEEMT 294
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 29/391 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A ++A+ L + G VPD T+ ILI +++AG+++ A N
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVY---TYTILIDCFSKAGIIKQA------HN 545
Query: 61 NLD-MVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD MV++ + + L+ + K +V A+E F + + P V Y L++G
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELM--IAKGCFPNVITYTALIDG 603
Query: 119 WFRSKNVKDAERFWLEMR--------------KENVT--PNVVTYGTLVEGYCRLRRVDR 162
+ +S N++ A + + MR K NV PNVVTYG LV+G C+ +V
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A L++ M +G EPN IVY+ +IDG +A + +E + + + P + TY+SL+
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID 723
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
K L+ K+L M+ P+ Y SK K ++A L M E G P
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY ++ K K+D +++ +EM +GC + T T+LI+ C DEA A
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
E+M + H ++ ++ + +K+ + +L
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGYKREFILSLG 874
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 28/366 (7%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +F+ A+ ++ + +G VPD T+ +I A VE A + F+
Sbjct: 462 RCLCGFGKFEKAYKVIHEMMGNGFVPD---TSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+V + + + IL+D K G +K A + + + PTV Y L++ + ++
Sbjct: 519 GVVPDVYT----YTILIDCFSKAGIIKQAHNWLDEM--VRDGCEPTVVTYTTLIHAYLKA 572
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
K V A + M + PNV+TY L++GYC+ +++A ++ MR + P+ +Y
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 632
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+ + + E P +VTY +LV G CKA ++ A +L+ M
Sbjct: 633 FKIKNNVAEK-------------------PNVVTYGALVDGLCKAHKVKDARDLLETMFV 673
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G P+ Y+ F K K+++A ++ KM+E GY P+ TY L+ L K+ +LDL
Sbjct: 674 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDL 733
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
++V +M C ++ T +I L ++ K DEA M +G P+ +T+ + D
Sbjct: 734 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 793
Query: 363 EFKKRG 368
F K G
Sbjct: 794 GFGKAG 799
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 141/330 (42%), Gaps = 20/330 (6%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS----KNVK 126
G ++ IL+ S+C G + + K ++ + + + + + R +
Sbjct: 412 GYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFE 471
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + EM P+ TY ++ C RV+ A L KEM+ G+ P+ Y +I
Sbjct: 472 KAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILI 531
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
D +AG ++ ++ + PT+VTYT+L+ Y KA + A+++ ++MI++G
Sbjct: 532 DCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF 591
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD----------------RLTYHIL 290
P+ TY + K G +E A +Y +M PD +TY L
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK K+ A + + M GC+ + LI C+ K DEA F M+ G
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P+ T+ L D K L K+ + M
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 181/413 (43%), Gaps = 64/413 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWT----- 55
+I KAK+ A L I P+ + T+ LI Y ++G +E A
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVI---TYTALIDGYCKSGNIEKACQIYARMR 621
Query: 56 -----------FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS 104
F+ NN+ N + + L+D LCK +VK A +
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVT----YGALVDGLCKAHKVKDARDLLETM--FVDG 675
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P VY+ L++G+ ++ + +A+ + +M + PNV TY +L++ + +R+D +
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 735
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVK 222
+++ +M + PN ++Y +IDGL + + +E +M ++ E G P +VTYT+++
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM--LMMEEKGCKPNVVTYTAMID 793
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL----------- 271
G+ KAG ++ ++ + M S+G P+ TY + G +++A L
Sbjct: 794 GFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPK 853
Query: 272 ----YRKMIE------------------SGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
Y K+IE +G P L Y +L+ K +L++A+++ KE
Sbjct: 854 HVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKE 913
Query: 310 MKCRGCDIDLDTS--TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + + T LI+ K A F DMIR G++P TF L
Sbjct: 914 VISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHL 966
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L +L+ C+ G A E + K D + PT YN L+ + R+ + A+
Sbjct: 208 LLNVLIRKCCRNGLWNVALEELGRLK--DFGYKPTRMTYNALVQVFLRADKLDTAQLVHR 265
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++ + T G + C++ + A+ L++ KE PN I+YN +I GL EA
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEAS 322
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
FEE + R P + TY L+ G L +IL MMI+ G PS T +N
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL------DLAIQVS 307
+ K A L +KM + P + Y+IL+ +C +L +LA +
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
EM G ++ LC KF++A +M+ G VP T+ +
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 495
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 130/318 (40%), Gaps = 78/318 (24%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHK---------------------------------RKE 100
+++ L+D CK ++ A E FHK K
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L+ S AP + +Y +++G + +A + L M ++ PNVVTY +++G+ + +V
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME----------------- 203
D+ + L +EM +G PN + Y +I+ G +E ++E
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861
Query: 204 -----RFLVCEPG-----------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
R + G P ++ Y L+ + KAG LE A ++ K +IS
Sbjct: 862 IEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921
Query: 248 SP-----TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ T+ Y F Y SK G A L+ MI G PD T+ LL L + + +
Sbjct: 922 AAKKNLYTSLIYSFSYASKIGH---AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEE 978
Query: 303 AIQVSKEMKCRGCDIDLD 320
A+Q+S + C +D++
Sbjct: 979 ALQLSDSL----CQMDIN 992
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 57 EFANNLDMVKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV 111
EF +L +++ + S L+++L+D+ K GR++ A E + S A +
Sbjct: 868 EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNL 927
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
Y L+ + + + A + +M ++ V P++ T+ L+ G R+RR + A++L
Sbjct: 928 YTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 199/405 (49%), Gaps = 32/405 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG--GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I++L + + A C++L+ + G E+ +D FV+LI Y +AG+V+ ++ F
Sbjct: 154 IIQILGRYSMLNHARCIVLEDMPKKGFEL----DEDMFVLLIDSYGKAGIVQESVKMFSK 209
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L + ++ S +LF++++ ++GR A +F+K LD+ PT YN+L+ G
Sbjct: 210 MKELGVERSVKSYNALFKVIV----RKGRYMMAKRFFNKM--LDEGIGPTRHTYNVLIWG 263
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+F S ++ A RF+ +M+ ++P+VVTY T++ GY R +R++ A +L EM+ + I P
Sbjct: 264 FFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPT 323
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I Y T+I G R + ++E P VTYT+L+ C AG + A ILK
Sbjct: 324 VISYTTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILK 383
Query: 239 MMISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
M+ R +P + F + + K G ++ A+++ MI+ + Y +L++ C
Sbjct: 384 EMVRRRI--APKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFC 441
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTML----------IHLLCRMYKFDEASAEFEDM 345
K ++ D A++ K DI L + L I LC + +A F +
Sbjct: 442 KAEEYDQAVKFVD--KLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQL 499
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPRSME 388
+++G V L F L K G A ++ +M +PR +
Sbjct: 500 LKKG-VEDPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDAD 543
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 19/273 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR-VYNILLNGWFRSKNVKDAERFWL 133
+ LL LC G++ A + ++ + + AP ++ LLN ++ ++K A
Sbjct: 362 YTTLLPDLCDAGKMTEAKDIL--KEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLD 419
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI--------EPNAIVYNTV 185
M K ++ YG L+E +C+ D+A++ V ++ + I E + YN V
Sbjct: 420 GMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPV 479
Query: 186 IDGLVEAGRFEEVSGMMERFL---VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
I L G+ + + + L V +P + + +L+ G+ K G + A +ILK+M
Sbjct: 480 IQYLCSHGQTGKAEILFRQLLKKGVEDP----LAFNNLICGHAKEGTPDSAFEILKIMGR 535
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+G Y + + G+ DA MIE G+ PD + +++ L ++ ++
Sbjct: 536 KGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQT 595
Query: 303 AIQVSKEMKCRGCDIDLD-TSTMLIHLLCRMYK 334
A +V K M +G ++D + +L LL R ++
Sbjct: 596 ASRVMKSMVEKGVKENMDLVAKILEALLMRGHE 628
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 151/360 (41%), Gaps = 16/360 (4%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEY 94
F+ L+ +AG ++AA+ + M+K + S A + +L+++ CK A ++
Sbjct: 398 FLKLLNSQCKAGDLKAAVDVLD-----GMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKF 452
Query: 95 FHKRKELDQSWAPTVRV------YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
K E D P + YN ++ AE + ++ K+ V + + +
Sbjct: 453 VDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVE-DPLAFN 511
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ G+ + D A ++K M ++GI +A Y +I+ + G + ++ +
Sbjct: 512 NLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIED 571
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + S+++ + G ++ AS+++K M+ +G + G E+A
Sbjct: 572 GHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEA 631
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ ++ S + + LL IL ++ K A+++ R CDID + ++
Sbjct: 632 LGRIDLLMSSQCN---VNFDSLLSILSEKGKTIAALKLLDFGLQRDCDIDFKSYDKVLDA 688
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
L K A + ++ +G V + +++ L + G T A L ++ +S E
Sbjct: 689 LLAAGKTLNAYSILCKIMEKGGVTSWRSYEDLIKSLNQEGNTKQADILSRMIKGDDKSHE 748
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 187/360 (51%), Gaps = 28/360 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I++L +A + + A C+LLD G E +D +V+LI Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEW----DEDLWVLLIDSYGKAGIVQESVKLFQKM 106
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L + + S +LF+++L ++GR A YF+K L + PT +NI++ G+
Sbjct: 107 EELGVERTIKSYDALFKVIL----RRGRYMMAKRYFNKM--LSEGNEPTRHTFNIMIWGF 160
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F S V+ A RF+ +M+ + P+VVTY T++ GY R+++++ A + EM+ IEP
Sbjct: 161 FLSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTV 220
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y T+I G V R ++ ++E P +TY++L+ G C A + A ILK
Sbjct: 221 VTYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAQKMSEARSILKE 280
Query: 240 MISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M+ + +PT + F R S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 281 MVEKYI--TPTDNSIFLRLISGQCKAGDLDAAADVLKAMIRLSVPTEAGHYGVLIENYCK 338
Query: 297 EDKLDLAIQ-----VSKEMKCR-GCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRR 348
+ D A++ + K++ R + L+ S LI LC + +A+ E ++R+
Sbjct: 339 AGQYDQAVKLLDRLIEKDIILRPQSTLHLEPSAYNPLIEYLCN----NGQTAKAESLVRQ 394
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+L++ + ++ V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G EP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + + K G A KL +
Sbjct: 325 EAGHYGVLIENYCKAGQYDQAVKLLD 350
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 111/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + L++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDLWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR +P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREIMPDVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVEKYITP 288
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVLHG----AKNXEHALQFFRWVE-RSNLFEHNRETHHKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDLWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL 360
G+ P+ +T+ L
Sbjct: 250 GIKPNAITYSTL 261
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 133/295 (45%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MIXGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDRVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +++ PT ++ L++G
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAQKMSEARSIL--KEMVEKYITPTDNSIFLRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ ++ A M + +V YG L+E YC+ + D+A++L+ + ++ I
Sbjct: 302 CKAGDLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPLIEYLCNNGQTAKAESLVRQLMKLGVQDPTALN--ALIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + Y+ + + K + DA MIE+G+ PD
Sbjct: 418 SPDSAFELLKIMLRRKARSEKSAYDSLVQSYLKKSEPADAKAALDSMIENGHLPD 472
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 158/312 (50%), Gaps = 2/312 (0%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
++ ++ ++DSLCK V A + + + + P V ++IL++ + + K A
Sbjct: 144 NADVVMYSTIIDSLCKGKFVTDAYRLYSEM--IAKGIFPNVYTFSILVDALCKDRKGKQA 201
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M K+ V PNVVTYG +++GYC + +V++A+ + M +EG+EPN YN +I+G
Sbjct: 202 MNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIING 261
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + R +E + + + P +VTY L+ G CK G + + +++ M S G
Sbjct: 262 LCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVD 321
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN K ++ A+ L +++ + G P+ TY L+ LCK+ +L+ A + +
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E+ G I + T ++I+ LC+ FDEA A M +P ++++ + ++G
Sbjct: 382 EILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441
Query: 369 MTALAQKLCNVM 380
T KL M
Sbjct: 442 ETVKTNKLLCAM 453
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 165/340 (48%), Gaps = 21/340 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T IL+ Y G + TF F+ ++K ++ + F L+ +C G+ A
Sbjct: 47 TLTILMNCYCHTGGI-----TFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL- 100
Query: 94 YFHKRK-----ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
FH +LDQ Y IL+NG + + A + +RK V +VV Y
Sbjct: 101 LFHDHVVAHGFKLDQV------SYAILMNGLCKMGETRAAMQM---LRKTWVNADVVMYS 151
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T+++ C+ + V A RL EM +GI PN ++ ++D L + + ++ ++ +
Sbjct: 152 TIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK 211
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P +VTY +++ GYC + A I +M+ G P+ YN K +V++A
Sbjct: 212 GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEA 271
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
MNL+++M PD +TY+IL+ LCK K+ ++++ EM+ G +D+ T L+H
Sbjct: 272 MNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHA 331
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LC+ + D+A +++ +G+ P+ T+ L D K G
Sbjct: 332 LCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDG 371
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 8/248 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++ Y V A+ F N+ + + + + I+++ LCK+ RV A
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIF----NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNL 274
Query: 95 FHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F KE+ + P V YNIL++G + + + EMR T +++TY +L+
Sbjct: 275 F---KEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHA 331
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +D+AI LVKE++ +GI+PN Y T+IDGL + GR E+ + + L T
Sbjct: 332 LCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHIT 391
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TY ++ G CK G + A +L M +P +Y S+ G+ L
Sbjct: 392 VWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLC 451
Query: 274 KMIESGYT 281
MI G +
Sbjct: 452 AMIVRGLS 459
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 151/328 (46%), Gaps = 11/328 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L SL K A F R+ P++ IL+N + + + +
Sbjct: 13 FNHILASLVKINHYPTAISLF--RQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTK 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K PN +T+ TL++G C + A+ + G + + + Y +++GL + G
Sbjct: 71 ILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGE 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
M+ + V +V Y++++ CK + A ++ MI++G P+ T++
Sbjct: 131 TRAAMQMLRKTWV---NADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSI 187
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K K + AMNL M++ G P+ +TY ++ C ++++ A+ + M G
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ ++ ++I+ LC+ + DEA F++M + + P +T+ L D K G + +
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307
Query: 375 KLCNVMSSVPRSME------LLDSRCKD 396
+L + M S+ ++++ LL + CK+
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKN 335
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 110/246 (44%), Gaps = 3/246 (1%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + TP ++ + ++ ++ AI L +++ GI+P+ + +++ G
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++ + L P +T+T+L+KG C G A +++ GF +Y
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+ AM + RK + D + Y ++ LCK + A ++ EM +G
Sbjct: 121 LMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T ++L+ LC+ K +A M+++G+ P+ +T+ + D + A
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237
Query: 375 KLCNVM 380
+ NVM
Sbjct: 238 NIFNVM 243
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 153/296 (51%), Gaps = 12/296 (4%)
Query: 70 SGASLFEILLDSLCKQ-GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
S ASL +L+ +LCK G + AA F R+ ++ P Y L+NG R + +A
Sbjct: 154 SVASL-NVLIKALCKNSGTMDAALRIF--REMPNRGCPPDSYTYGTLINGLCRLGKIGEA 210
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ + EM + +P VVTY +L+ G C+ + +D AIRL++EM +GI+PN Y++++DG
Sbjct: 211 KELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDG 270
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
++G +++ + P M+TY++LV G CK G L+ A +IL M +G P
Sbjct: 271 HCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPD 330
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-------LCKEDKLD 301
Y F K +A N +M+ G +P+RLT+ + ++I LC E +
Sbjct: 331 AGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-N 389
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
A Q+ M+ RG ID T L++ C +A+ ++M+ G +P +T+
Sbjct: 390 RAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTW 445
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 161/331 (48%), Gaps = 15/331 (4%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ-GRVKA 90
S TF ++I R A F A L + + + ++ E + S+C+ GRV
Sbjct: 49 SHQTFSLMISRLVSANH-------FRLAEEL-LCRMKEEKCNITEDIFLSICRAYGRVHK 100
Query: 91 ---ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A F K KE + P+ + Y + +K A RF+ MR+ + P+V +
Sbjct: 101 PLDAVRVFRKMKEYE--CEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASL 158
Query: 148 GTLVEGYCRLR-RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
L++ C+ +D A+R+ +EM G P++ Y T+I+GL G+ E + +
Sbjct: 159 NVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEME 218
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT+VTYTSL+ G C++ DL+ A ++L+ M S+G P+ TY+ K G
Sbjct: 219 TKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSS 278
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ L M+ + P+ +TY L+ LCKE KL A+++ MK +G D +I
Sbjct: 279 RALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKII 338
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
C + KF EA+ ++M+ G+ P+ LT+
Sbjct: 339 SGFCDICKFHEAANFLDEMVLGGISPNRLTW 369
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKE--NVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ ++++++ + + + AE M++E N+T ++ + ++ Y R+ + A+R+
Sbjct: 51 QTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDI--FLSICRAYGRVHKPLDAVRVF 108
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK- 226
++M++ EP+ Y TV LV + + P++ + L+K CK
Sbjct: 109 RKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKN 168
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G ++ A +I + M +RG P TY + GK+ +A L+++M +P +T
Sbjct: 169 SGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVT 228
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ LC+ LD AI++ +EM +G ++ T + L+ C+ A + M+
Sbjct: 229 YTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMV 288
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
R +P+ +T+ L K G
Sbjct: 289 SRRHLPNMITYSTLVHGLCKEG 310
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 2/313 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L LC R + A + + + +P V YN +++G+F+ + A + E
Sbjct: 82 YAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHE 141
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P+VVT+ +++ C+ R VD A L+++M G+ PN + Y ++I G GR
Sbjct: 142 MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGR 201
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+EE + M P +V++ S + CK G + A++I M ++G P+ TY
Sbjct: 202 WEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGI 261
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G D M+ + M G + L + IL+ K +D A+ + EM+ +G
Sbjct: 262 LLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + LI LCRM + +A +F MI G+ P+ + + L F G A+
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAK 381
Query: 375 KLCNVM--SSVPR 385
+L M + +PR
Sbjct: 382 ELVYEMMNNGIPR 394
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 197/492 (40%), Gaps = 118/492 (23%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D+A LLL ++ + VP +K T+ +I Y+ G E A F
Sbjct: 157 IINALCKARAVDNAE-LLLRQMVDNGVPP--NKVTYTSMIHGYSTLGRWEEATKMFREMT 213
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + S S +DSLCK GR K A+E F+ + P + Y ILL+G+
Sbjct: 214 GRGLIPDIVSWNSF----MDSLCKHGRSKEAAEIFYSMAA--KGHRPNIVTYGILLHGYA 267
Query: 121 RSKNVKDAERFW-----------------------------------LEMRKENVTPNVV 145
D F+ EM+ + ++P+V
Sbjct: 268 TEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVF 327
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF----EEVSGM 201
TY TL+ CR+ R+ A+ +M G++PN +VY+++I G G E V M
Sbjct: 328 TYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEM 387
Query: 202 MERFL--------------VCEPGPTM------------------VTYTSLVKGYCKAGD 229
M + +C+ G M + + +L+ GYC G+
Sbjct: 388 MNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGE 447
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-------------- 275
+ A +L MIS G P TYN + K G+++D +NL+R+M
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI 507
Query: 276 ---------------------IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
I G T TY+I+LK LC+ + D AI + +++
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T +I+ + + + +EA F + GLVP+ T+ + K G A
Sbjct: 568 VKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627
Query: 375 KLCNVMSSVPRS 386
N+ SS+ +S
Sbjct: 628 ---NMFSSMEKS 636
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 140/317 (44%), Gaps = 3/317 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ K+G++ A +H+ + Q + P V +N ++N +++ V +AE +
Sbjct: 119 YNTVIHGFFKEGKIGKACNLYHEM--MQQGFVPDVVTHNSIINALCKARAVDNAELLLRQ 176
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V PN VTY +++ GY L R + A ++ +EM G+ P+ + +N+ +D L + GR
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGR 236
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + P +VTY L+ GY G M G + + +
Sbjct: 237 SKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTI 296
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K G +++AM + +M G +PD TY L+ LC+ +L A+ +M G
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV-PHYLTFKRLNDEFKKRGMTALA 373
+ LI C +A +M+ G+ P+ F + K G A
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416
Query: 374 QKLCNVMSSVPRSMELL 390
+ +++ + +++
Sbjct: 417 HHIFDLVKDIGERSDII 433
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 7/278 (2%)
Query: 39 LIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
LI+ + G +V+A +E NN N + F ++ S+CK+GRV A F
Sbjct: 367 LIQGFCTHGDLVKAKELVYEMMNNGIPRPNI----AFFNSIVHSICKEGRVMDAHHIFDL 422
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
K++ + + ++N L++G+ + A M + P+ TY TLV GY +
Sbjct: 423 VKDIGER--SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
R+D + L +EM + I+P + YN ++DGL AGR M+ + C ++ TY
Sbjct: 481 GRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTY 540
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
++KG C+ + A + + + + + TT N + E+A +L+ + +
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISD 600
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
SG P+ TY I+++ L KE ++ A + M+ GC
Sbjct: 601 SGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGC 638
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 38/301 (12%)
Query: 107 PTVRVYNILLNGWFR-----------------------------------SKNVKDAERF 131
PT+ Y +++NG R +K DA +
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 132 WL-EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK-EGI-EPNAIVYNTVIDG 188
L M + P+ +Y +++ C R +A+ L++ M K EG+ P+ + YNTVI G
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
+ G+ + + + P +VT+ S++ CKA ++ A +L+ M+ G P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TY +S G+ E+A ++R+M G PD ++++ + LCK + A ++
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M +G ++ T +L+H F + + F M G+V + L F L D + KRG
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305
Query: 369 M 369
M
Sbjct: 306 M 306
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 5/239 (2%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P + TYG ++ G CR RR + + + + G++ + NTV+ L R ++ +
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 202 MERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP--TTYNYFFR 257
+ R + E G P +Y ++K C + A +L+MM + SP TYN
Sbjct: 66 LLRRMT-ELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K GK+ A NLY +M++ G+ PD +T++ ++ LCK +D A + ++M G
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T T +IH + +++EA+ F +M RGL+P +++ D K G + A ++
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 4/223 (1%)
Query: 62 LDMVKNFD--SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
D+VK+ S +F L+D C G + A + P YN L+NG+
Sbjct: 420 FDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAM--ISAGIGPDTFTYNTLVNGY 477
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F+S + D + EM + + P VTY +++G R R A +++ EM G +
Sbjct: 478 FKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSL 537
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN ++ GL +E M ++ + T +++ E A +
Sbjct: 538 PTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSA 597
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
+ G +P+ +TY R K G VE+A N++ M +SG P
Sbjct: 598 ISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 168/354 (47%), Gaps = 14/354 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ LI + ++G +E A+ V N + +SL L LCK G
Sbjct: 187 PDVV---TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL----LHGLCKAGD 239
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + F R+ + P V Y L++G + V A EM + V+Y
Sbjct: 240 LDQALDLF--RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSY 297
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++GYCRL R++ A +L KEM + P+ I Y ++ G A R EE ++E
Sbjct: 298 NALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 357
Query: 208 CEP-GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY+ +V GY +A A++ ++ MI+R P+ TY+ K G+V
Sbjct: 358 AAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVN 417
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM + + + + PD +TY I+++ LC D+ + A+ + +EM + + + T +I
Sbjct: 418 HAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVI 473
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LCR+ DEA M GL P +T+ L + F + G +A +L VM
Sbjct: 474 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 527
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 162/325 (49%), Gaps = 40/325 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK A E + ++ +S AP + Y+ ++NG+ + + A E
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMRD-GKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 135 M-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M ++ + P+VVTY ++V+G CR ++DRA +V+EM+ +G+EP+ ++ +I G A
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130
Query: 194 RFEEVSGMMERFL-----------------VC------------------EPG---PTMV 215
+ +E + + L +C E G P +V
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TYT+L+ G+CK+G+LE A K+L +M R +P+ TY+ K G ++ A++L+R+M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G P+ +TY L+ LC K+D A + EM C D + L+ CR+ +
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
+EA F++M + +P +T+ L
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCL 335
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 184/400 (46%), Gaps = 51/400 (12%)
Query: 21 KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLD 80
K+ G E PD K TF LI + A V+ A+ ++ L D+ +S L+
Sbjct: 108 KLKGVE-PD---KFTFSALITGWCNARKVDEALKLYK--EILTSSCRLDAVSS--SALIT 159
Query: 81 SLCKQGRVKAASEYFHKRK-ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
LC++ R+ A E F + + D +W P V Y L++G+ +S N++ A + M
Sbjct: 160 GLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 219
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
PNVVTY +L+ G C+ +D+A+ L + M +G PN + Y T+I GL A + +
Sbjct: 220 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 279
Query: 200 GMM-ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+M E C P T V+Y +L+ GYC+ G +E A ++ K M ++ LP TY R
Sbjct: 280 LLMDEMTATCCPADT-VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRG 338
Query: 259 FSKFGKVEDAMNLYRKM---------------IESGYT---------------------P 282
F ++E+A L M + +GY+ P
Sbjct: 339 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY L+ LCK +++ A++V K + D+ T T++I LC + +EA
Sbjct: 399 NAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLL 454
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
E+M+ + + P TF + + G A KL M++
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 494
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 173/359 (48%), Gaps = 23/359 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVP-DFVSKDTFVILIRRYARAGMVEAAIWTF-EF 58
+I L A + D+A LL+D++ P D VS + L+ Y R G +E A F E
Sbjct: 265 LIHGLCAAHKVDAAR-LLMDEMTATCCPADTVS---YNALLDGYCRLGRIEEAKQLFKEM 320
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A K+ + L+ C R++ A + + + P V Y+I++ G
Sbjct: 321 A-----AKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPDVVTYSIVVAG 374
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ R+K +A F EM NV PN VTY +L++G C+ RV+ A+ ++K + K P+
Sbjct: 375 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PD 430
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y VI+GL R EE ++E + P++ T+ S++ C+ GD++ A K+L
Sbjct: 431 VVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 490
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY----RKMIESGYTPDRL---TYHILL 291
M + G P TY FS+ G++E A L+ RK +S + + + L+
Sbjct: 491 AMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALI 550
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK ++D A+ V +E++ R C+ + ++ L R + +EA + + GL
Sbjct: 551 RGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 179/393 (45%), Gaps = 25/393 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA + D A L VP+ V T+ LI A V+AA +
Sbjct: 230 LLHGLCKAGDLDQALDLFRRMTSKGCVPNVV---TYTTLIHGLCAAHKVDAARLLMD--- 283
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M ++ + LLD C+ GR++ A + F + +S P Y L+ G+
Sbjct: 284 --EMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAA--KSCLPDRITYTCLVRGF 339
Query: 120 FRSKNVKDAERFWLEMRK--ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ +++A RF LE K + P+VVTY +V GY R +R A ++EM + P
Sbjct: 340 CNASRLEEA-RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
NA+ Y+++IDGL +AGR +++ P +VTYT +++G C E A +L
Sbjct: 399 NAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLL 454
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M+++ PS T+N + G +++A L M G P +TY LL+ +
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 514
Query: 298 DKLDLAIQV-------SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
++++A ++ +K+ + + LI LC+ + D+A A E++ R
Sbjct: 515 GRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSREC 574
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
P + D + G T A KL N +S V
Sbjct: 575 EPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 139/260 (53%), Gaps = 5/260 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRK-ENVTPNVVTYGTLVEGYCRLRRVDRAI 164
AP R YN+++NG +++ A EMR ++V P++VTY T++ G+C+ +DRA
Sbjct: 6 APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65
Query: 165 RLVKEM-RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+++EM ++G+ P+ + Y +V+DGL G+ + M+ + P T+++L+ G
Sbjct: 66 EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM---IESGY 280
+C A ++ A K+ K +++ + + + ++ +A L+++M + +
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD +TY L+ CK L+ A+++ M+ R C ++ T + L+H LC+ D+A
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245
Query: 341 EFEDMIRRGLVPHYLTFKRL 360
F M +G VP+ +T+ L
Sbjct: 246 LFRRMTSKGCVPNVVTYTTL 265
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 173/350 (49%), Gaps = 15/350 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +LAK + F A LLD++ VP +S+ + L RRY RA M E A+
Sbjct: 141 MIVLLAKHRHFGLAR-HLLDEMRERAVP--ISRQLILALTRRYVRAEMPS------EAAD 191
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +GA L L + + ASE + P V +Y +++ W
Sbjct: 192 LFRRMEEYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWC 251
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + +AER + EM++ + PNV TY +++ R +V RA L+ +M G PN
Sbjct: 252 RAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTT 311
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYC--KAGDLEGASKI 236
+N ++ V+AGR E+V + + L CEP ++TY L++ +C G+L+ A K+
Sbjct: 312 TFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPD--VITYNFLIETHCGKGQGNLDAALKV 369
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M ++ +P T+N FR G + A LY KM E P+ +TY+ LL++ K
Sbjct: 370 LDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNK 429
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
E +D+ +++ K+M G + ++ T LI C + A ++MI
Sbjct: 430 EKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMI 479
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 12/252 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + +A + A LL I P+ TF ++R + +AG E + + N
Sbjct: 281 VIDAMYRAGQVPRAQELLCQMIDSGCPPNTT---TFNAIMRSHVKAGRSEQVL---QVHN 334
Query: 61 NLDMVKNFDSGASLFEILLDSLCK--QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ ++ + + L+++ C QG + AA + K + P +N +
Sbjct: 335 QMQQLR-CEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTA--KKCVPDCHTFNPMFRL 391
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
N+ A + + +MR+ PNVVTY L+ + + + +D +R+ K+M EGIEPN
Sbjct: 392 LLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPN 451
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASKIL 237
Y +I+ G ++ ++ + + P+ ++ KAG L+ +++
Sbjct: 452 MHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQVRDMVLVLLRKAGQLKKHEELV 511
Query: 238 KMMISRGFLPSP 249
++M+ RGF+ P
Sbjct: 512 ELMVDRGFISQP 523
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK-LCNVMS 381
T ++H CR + DEA F +M + G++P+ T+ + D + G AQ+ LC ++
Sbjct: 244 TAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMID 303
Query: 382 S 382
S
Sbjct: 304 S 304
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 13/297 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++++ CK G VK A ++ K + +P + G+ RSK+V A R + E
Sbjct: 195 FNLMINVYCKMGFVKEAKQFMCKM--IQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEE 252
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N V+Y L+ G C R+D A+ L M+ + PN Y +I GL
Sbjct: 253 MPNRNE----VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNV 308
Query: 195 FEEVS---GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ + M+ER LV P ++TY SL+ G C+AG L+ A ++L +M RG +P T
Sbjct: 309 HKAMGLLDEMLERNLV----PDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRT 364
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y F + K +VE+A L+ + E G + + + Y +L+ CK K+D A + ++M
Sbjct: 365 YGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKML 424
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ C + T LIH LC EA + F+ M++ GL P TF L K+G
Sbjct: 425 SKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQG 481
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 169/373 (45%), Gaps = 14/373 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI V K A + I PD+ + +F++ Y R+ V++A FE
Sbjct: 198 MINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFIL---GYCRSKDVDSAFRVFEEMP 254
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + V + L+ LC+ GR+ A F + K D P V Y L+ G
Sbjct: 255 NRNEVS--------YNQLIHGLCEAGRIDEAVSLFVRMK--DDCCYPNVYTYTALIKGLC 304
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R KNV A EM + N+ P+++TY +L+ G CR +D A RL+ M++ G+ P+
Sbjct: 305 R-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR 363
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ID L ++ R EE + + ++ Y+ L+ GYCK G ++ A + + M
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+S+ P+ T+N G +++A++L+ +M++ G P T++IL+ + K+
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDF 483
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A + ++M G T I + C K EA M G+ P T+ L
Sbjct: 484 DDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSL 543
Query: 361 NDEFKKRGMTALA 373
+ K G+T A
Sbjct: 544 IKAYGKLGLTYSA 556
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 146/335 (43%), Gaps = 31/335 (9%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C+ G + +A KE + P R Y ++ +S V++A R +
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKE--RGLVPDQRTYGCFIDFLCKSNRVEEARRLFDS 387
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ +E V+ NV+ Y L++GYC++ +VD A L ++M + PNA +N +I GL AG
Sbjct: 388 LTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGN 447
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + ++ + PT+ T+ L+ K GD + A K L+ M+S G P TYN
Sbjct: 448 LKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNA 507
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + GKV++A ++ +M E G PD TY L+K K A V K M
Sbjct: 508 FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD 567
Query: 315 CDIDLDTSTMLIHLLC-----------------------------RMYKFDEASAEFEDM 345
C+ T LI L +M +FD FE+M
Sbjct: 568 CEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEM 627
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ G P +++L K +A KL + M
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQM 662
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 162/408 (39%), Gaps = 56/408 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K + D A CL + + P+ TF LI AG ++ A+ F+
Sbjct: 403 LIDGYCKVGKVDEAGCLFEKMLSKNCSPNAY---TFNALIHGLCSAGNLKEALSLFD--- 456
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MVK F IL+ + KQG A + K + P R YN + +
Sbjct: 457 --QMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM--MSSGEKPVARTYNAFIEVY 512
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V++AE ++M++E V P+ TY +L++ Y +L A ++K M EP+
Sbjct: 513 CSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSH 572
Query: 180 IVYNTVI---------------DGLVEAGRFEEVSG-----MMERFLVCE---------P 210
+ ++I G+ F +V G MME +V E
Sbjct: 573 HTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGC 632
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P Y L+ G CK +L A K+L M G PS +N K K +A N
Sbjct: 633 TPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAAN 692
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST--MLIHL 328
+ MI SG++P L+ L +E + + V K++ RGC + D +LI
Sbjct: 693 IVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKL--RGCGYNDDEIAWKILIDG 750
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ + +E S FE+M + G F R + L QKL
Sbjct: 751 MLKQGLVEEFSQLFEEMEKNGC------------NFSPRTYSILTQKL 786
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 134 EMRKENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M K+++T ++ Y L+ R VD +L EM +E + + +N +I+ +
Sbjct: 146 KMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKM 205
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G +E M + + P T TS + GYC++ D++ A ++ + M +R + +Y
Sbjct: 206 GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSY 261
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + G++++A++L+ +M + P+ TY L+K LC+++ + A+ + EM
Sbjct: 262 NQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLE 320
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF--------------- 357
R DL T LI CR D A M RGLVP T+
Sbjct: 321 RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEE 380
Query: 358 -KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCK 395
+RL D + G++A +M SV L+D CK
Sbjct: 381 ARRLFDSLTEEGVSANV-----IMYSV-----LIDGYCK 409
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K TP+ Y L+ G C++ + A++L+ +M+KEGI P+ +V+N VI +
Sbjct: 626 EMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQ 685
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ E + ++E + P + +L+ G + G+ E + + K + G+ +
Sbjct: 686 KYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWK 745
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
K G VE+ L+ +M ++G TY IL + L +D
Sbjct: 746 ILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGKD 790
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 171/371 (46%), Gaps = 10/371 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L +K+F W L D + + F ++ R Y RA + AI F
Sbjct: 120 LVDILGSSKQFPLIWDFLSDMRETRCCE--ICPEIFWLIFRAYCRANLPGDAIRAFHQMG 177
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + +G + LL LCK+ VK A E+F K ++ P + Y+IL+ GW
Sbjct: 178 DFGV----KAGVGDVDQLLYVLCKRKHVKQAQEFFDK---VNVEVMPNAKTYSILMRGWG 230
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A + + EMR+ +VV Y +L+E C+ VD A +L +EM G+ P+A
Sbjct: 231 DVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDAC 290
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ I E +++R P + TY +VK CK+ ++ A ++L M
Sbjct: 291 SYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM 350
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I RG P +YN + +V A+ L +M + PDR TY+++LK+L + +
Sbjct: 351 IERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRF 410
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY-KFDEASAEFEDMIRRGLVPHYLTFKR 359
D V M+ RG T +++H C+ K +EA FE MI G+ P+ T +
Sbjct: 411 DRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVEL 470
Query: 360 LNDEFKKRGMT 370
L + G +
Sbjct: 471 LRNRVIGLGFS 481
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 186/382 (48%), Gaps = 14/382 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L KAK F W L+ ++ + G VS +T +IRR ARAG + AI F
Sbjct: 236 MVDILGKAKNFRLMWELVDEMNHLAGS-----VSLETMSKVIRRLARAGRHQEAIHAFR- 289
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
N++ + + +L+D+L K+ V+ A F +EL S + +N+L++G
Sbjct: 290 --NIEKY-GISTDTTAMNVLMDALVKEASVEDAHNVF---RELKCSIPFNLASFNVLIHG 343
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++K + +A + E+ K + P+V++Y +E +CR + +++ +M +G +PN
Sbjct: 344 YCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPN 403
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I + ++ L +A + E + E+ P Y+SL+ KAG L +I++
Sbjct: 404 VITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVE 463
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M +G P TYN + E A+ L KM E PD TYH LLK+ C++
Sbjct: 464 DMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKK 523
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ + + M I+ T +L+ LC K A + F +M+ + +VP TFK
Sbjct: 524 RMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFK 583
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
L +E +++ M + + N+M
Sbjct: 584 MLKEELERKSMLEEMKIIENLM 605
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN+++D L +A F + +++ ++ T + +++ +AG + A + +
Sbjct: 233 YNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIE 292
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL-TYHILLKILCKEDKL 300
G T N K VEDA N++R++ S P L ++++L+ CK KL
Sbjct: 293 KYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCS--IPFNLASFNVLIHGYCKAKKL 350
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D A ++ E++ G + D+ + T I CR F M +G P+ +TF
Sbjct: 351 DEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITF 407
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 140/271 (51%), Gaps = 4/271 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL LC + R + A E H + P V Y+ +++G F+ + A + E
Sbjct: 172 YNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHE 231
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+VVTY T+V C+ + +D+A+ ++ M K G+ P+ I YN+++ G +G+
Sbjct: 232 MLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQ 291
Query: 195 FEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+E G++E+ C G P VTYTSL+ CK G A KIL MI RG P+ TY
Sbjct: 292 SKEAIGILEKM--CSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITY 349
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ ++ G + + +L M+ +G PDR + IL+ K +D+A+ V +M+
Sbjct: 350 STLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQ 409
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+ D+ T LI LC+ + D+A E
Sbjct: 410 QRLTPDVVTYGTLIDGLCKSGRVDDAMLNLE 440
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 143/307 (46%), Gaps = 7/307 (2%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
L ++ + A S + + D + PT+ Y IL+ R+ + + K+
Sbjct: 68 LAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKK 127
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + L++ C +R A+ +V + M + G P+ YN ++ GL R +E
Sbjct: 128 GYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQE 187
Query: 198 VSGMMERFLVCEPG----PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ ++ + G P +V+Y++++ G K GD + A M+ RG LP TYN
Sbjct: 188 ALELLH--MMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYN 245
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K ++ AM++ +M+++G PD +TY+ ++ C + AI + ++M
Sbjct: 246 TIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSD 305
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + D T T L+ LC+ + EA + MI+RGL P+ +T+ L + +G
Sbjct: 306 GVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEM 365
Query: 374 QKLCNVM 380
+ L ++M
Sbjct: 366 RDLLDLM 372
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 112/304 (36%), Gaps = 50/304 (16%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN--VTPNVVTYGTLVEGYCRLRRVDRA 163
A +R N L R F R + VTP + TYG L+ CR R+D
Sbjct: 58 ASIIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLG 117
Query: 164 IRLVKEMRKEG--IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+ + K+G +EP + +T L+
Sbjct: 118 FAGLGNVIKKGYRVEP-------------------------------------IIFTPLL 140
Query: 222 KGYCKAGDLEGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG- 279
K C A I L+ M G P +YN + + ++A+ L M + G
Sbjct: 141 KSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGG 200
Query: 280 -YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
PD ++Y ++ L KE D A EM RG D+ T ++ LC+ D+A
Sbjct: 201 DCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKA 260
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT----ALAQKLCN--VMSSVPRSMELLDS 392
M++ G++P +T+ + + G + + +K+C+ V L+D
Sbjct: 261 MDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDY 320
Query: 393 RCKD 396
CK+
Sbjct: 321 LCKN 324
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 193/428 (45%), Gaps = 66/428 (15%)
Query: 19 LDKIGGHEVPDFVSKDT------FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGA 72
L K G + + VS T F LI Y +AG + A+ E ++ + S
Sbjct: 127 LAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVS-- 184
Query: 73 SLFEILLDSLCKQGRVKAASEYFHK-------------------RKELDQSWAPTVRVYN 113
+ L++ CK+G A H+ +K+ + + + Y
Sbjct: 185 --YNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYT 242
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+++ + + +++A + EM P+VVTY ++V G C+ R+ A L++EM+K
Sbjct: 243 TIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKM 302
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEE---------VSGMMERFLVC-----------EPG-- 211
G++PN + Y T+ID L +AG E V GM ++C +P
Sbjct: 303 GVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEA 362
Query: 212 -------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
P +TYT+L+ GYCK GD+E +L+ M + P+ TY+
Sbjct: 363 EDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIING 422
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
++K G +++A+N+ +KM++ P+ Y IL+ CK K ++A + EMK G ++
Sbjct: 423 YTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVN 482
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+L++ L R + DEA +D+ RGL+ ++ + L D F K G + A +
Sbjct: 483 NVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVE 542
Query: 379 VMS--SVP 384
M+ S+P
Sbjct: 543 EMTEKSIP 550
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 176/390 (45%), Gaps = 43/390 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ +I Y + +E A +E +M+ N F + +++ LCK GR+ A E
Sbjct: 240 TYTTIISTYCKQHGLEEARALYE-----EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQE 294
Query: 94 YFHKRKELD-------------------QSWAP-------TVRVYNI-------LLNGWF 120
+ K++ +W VR + L++G F
Sbjct: 295 LLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLF 354
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+S K+AE + + K N+ PN +TY L++GYC++ ++R L++EM ++ I PN I
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++I+G + G +E +M++ L P Y L+ GYCKAG E A+ + M
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G + ++ + ++++A L + + G D + Y L+ K K
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKE 534
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A+ + +EM + D+ T +LI+ L K+ EA + + MI GL P+ T+ +
Sbjct: 535 SAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIM 593
Query: 361 NDEFKKRGMTALAQKLCNVMSS---VPRSM 387
+ K+G A +L N M S +P S+
Sbjct: 594 IKAYCKQGELDNALELWNEMKSHKIMPSSI 623
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 170/424 (40%), Gaps = 71/424 (16%)
Query: 36 FVILIRRYARAGMVEAAIWTFE----------------FANNLDMVKNFDSGASL----- 74
+ ILI Y +AG E A + NNL K D L
Sbjct: 451 YAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVT 510
Query: 75 ----------FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ L+D K G+ AA + E +S V YN+L+NG
Sbjct: 511 SRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTE--KSIPFDVVTYNVLINGLLEHGK 568
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+A+ + M + + PN TY +++ YC+ +D A+ L EM+ I P++I NT
Sbjct: 569 Y-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNT 627
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMV----------------------------- 215
++ GL EAG E+ ++ V P +V
Sbjct: 628 LVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMG 687
Query: 216 ------TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
Y +L+ +C+ + A+ +LK MI GF+ TYN R + + V+ A+
Sbjct: 688 LKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKAL 747
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
Y +M+ G +P+ +TY++LL L + ++ +MK G + D T LI
Sbjct: 748 ATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGY 807
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPRSM 387
++ E+ + +M+ +G VP T+ L +F K G A++L N M VP S
Sbjct: 808 GKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSS 867
Query: 388 ELLD 391
D
Sbjct: 868 STYD 871
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 170/368 (46%), Gaps = 43/368 (11%)
Query: 25 HEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCK 84
H P+ + T+ +I Y + G+++ AI + + +++ N A ++ IL+D CK
Sbjct: 408 HINPNVI---TYSSIINGYTKKGILDEAINVMKKMLDQNIIPN----AYVYAILIDGYCK 460
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
G+ + A++ +++ K L V ++++L+N R K + +AE ++ + +
Sbjct: 461 AGKQEIATDLYNEMK-LSGLKVNNV-LFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDH 518
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE---VSGM 201
V Y +L++G+ + + A+ +V+EM ++ I + + YN +I+GL+E G++E SGM
Sbjct: 519 VNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGM 578
Query: 202 MERFLV-------------CEPG------------------PTMVTYTSLVKGYCKAGDL 230
+E L C+ G P+ +T +LV G +AG++
Sbjct: 579 IEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEI 638
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A +L M G P+ + SK GK + ++ ++++ G ++ Y+ L
Sbjct: 639 EKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNL 698
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ + C+ A V K M G D T LI C +A A + M+ G+
Sbjct: 699 IVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGV 758
Query: 351 VPHYLTFK 358
P+ +T+
Sbjct: 759 SPNIVTYN 766
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 170/381 (44%), Gaps = 42/381 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
MIK K E D+A L +++ H++ P ++ +T V+ + + AG +E A+
Sbjct: 593 MIKAYCKQGELDNAL-ELWNEMKSHKIMPSSITCNTLVVGL---SEAGEIEKAMNVLNEM 648
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ + + N + +LL++ K G+ A + + +D YN L+ +
Sbjct: 649 SVMGIHPNL----VIHRVLLNASSKSGKANAVLQMHEQL--VDMGLKINQEAYNNLIVVF 702
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + K A M ++ + VTY L+ GYC V +A+ +M EG+ PN
Sbjct: 703 CRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNI 762
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN ++ GL+ AG E + ++ P TY +L+ GY K G+ + + ++
Sbjct: 763 VTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCE 822
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+++GF+P +TYN F+K GK++ A L +M G P TY IL+
Sbjct: 823 MVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI-------- 874
Query: 300 LDLAIQVSKEMKCRGCDI----DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
C C++ DLD + L ++Y+ D A +M +G VP
Sbjct: 875 ------------CGWCNLSKHPDLDRT------LKKIYRTD-AKNLITEMNDKGFVPCKS 915
Query: 356 TFKRLNDEFKKRGMTALAQKL 376
T ++ F + G A+KL
Sbjct: 916 TIACISSTFARPGKMLDAEKL 936
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 24/295 (8%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ PT+ ++N L+ + V + EM V PNV T+ LV +C++ +
Sbjct: 4 HNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLIL 63
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ L +R +E + + YNTVI G + G + G + + + +T LVK
Sbjct: 64 ALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVK 120
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G+C+ G + +I+ ++S G +N + K G++ A++L +M + G
Sbjct: 121 GFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS 180
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEM-KCRGC--------------------DIDLDT 321
D ++Y+ L+ CK + D A + E+ + RG + DL T
Sbjct: 181 DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLIT 240
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T +I C+ + +EA A +E+MI G +P +T+ + + K G + AQ+L
Sbjct: 241 YTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQEL 295
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 170/432 (39%), Gaps = 76/432 (17%)
Query: 14 AWC------LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
AWC L LD + +V V T+ +I + + G+V A MVK
Sbjct: 54 AWCKMGNLILALDLLRNVDVE--VDTVTYNTVIWGFCQHGLVNQAFGFLSI-----MVKK 106
Query: 68 ---FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
FD+ IL+ C+ G K + V +N L++G+ ++
Sbjct: 107 DTCFDTITC--NILVKGFCRIGLAKYGERIMDNL--VSGGTCKDVIGFNTLIDGYCKAGE 162
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE----------- 173
+ A MRKE + ++V+Y TL+ G+C+ D+A L+ E+ +
Sbjct: 163 MSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNI 222
Query: 174 ----------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+E + I Y T+I + EE + E ++ P +VTY+S+V G
Sbjct: 223 DDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNG 282
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG-------------------- 263
CK G L A ++L+ M G P+ Y K G
Sbjct: 283 LCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLD 342
Query: 264 ---------------KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
K ++A +++R + + P+ +TY L+ CK ++ + +
Sbjct: 343 LVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQ 402
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EM+ + + ++ T + +I+ + DEA + M+ + ++P+ + L D + K G
Sbjct: 403 EMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAG 462
Query: 369 MTALAQKLCNVM 380
+A L N M
Sbjct: 463 KQEIATDLYNEM 474
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 20/258 (7%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVK 89
++++ + LI + R M + A ++ M+++ F + + L+ C+ VK
Sbjct: 690 INQEAYNNLIVVFCRLRMTKKATSVLKY-----MIRDGFVADTVTYNALIRGYCESSHVK 744
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + + L++ +P + YN+LL G + + + + + +M++ + P+ TY T
Sbjct: 745 KALATYTQM--LNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDT 802
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ GY ++ +IRL EM +G P YN +I + G+ ++ ++ V
Sbjct: 803 LISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRG 862
Query: 210 PGPTMVTYTSLVKGYC---KAGDLE---------GASKILKMMISRGFLPSPTTYNYFFR 257
P+ TY L+ G+C K DL+ A ++ M +GF+P +T
Sbjct: 863 VPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISS 922
Query: 258 YFSKFGKVEDAMNLYRKM 275
F++ GK+ DA L +++
Sbjct: 923 TFARPGKMLDAEKLLKEI 940
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 3/212 (1%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
MRK I P +++N +I G +V + L P + T+ LV +CK G+
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
L A +L+ + TYN F + G V A M++ D +T +I
Sbjct: 61 LILALDLLR---NVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+K C+ ++ + G D+ LI C+ + A E M + G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
L+ +++ L + F KRG A+ L + +S
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +P+ +N +F+ FG V ++Y +M+ S P+ T+++L+ CK
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTST--MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L LA+ + R D+++DT T +I C+ ++A M+++ +T
Sbjct: 61 LILALDL-----LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITC 115
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS------VPRSMELLDSRCK 395
L F + G+ +++ + + S V L+D CK
Sbjct: 116 NILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCK 159
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 148/288 (51%), Gaps = 2/288 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ + F + LL+ LCK G + A ++ R D S V +YN +++G + K
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFL--RMIEDSSTGLNVVMYNTIIDGLCKDK 206
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
V +A F+ EM + PNV+TY TL+ G+C ++ A L+ EM + I PN Y
Sbjct: 207 LVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYA 266
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+ID L + G+ +E ++ +VTYTSL+ G+CK +L+ A+ + M
Sbjct: 267 ILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEW 326
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P+ TY K G+++DA L++ ++ G D TY++++ LCKE LD A
Sbjct: 327 GIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEA 386
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ + +M+ GC ++ T ++I L + + D+A +MI +GL+
Sbjct: 387 LAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 175/378 (46%), Gaps = 13/378 (3%)
Query: 5 LAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
LAK K + +A L ++ G E P+ V T ILI + G + +F F+
Sbjct: 62 LAKMKHYSTAISLSKQMEVKGIE-PNLV---TLNILINCFCHLGQM-----SFSFSVLGK 112
Query: 64 MVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
++K + L+ LC +G V+ S +FH K + Q + Y LLNG +
Sbjct: 113 ILKLGYQPNTITLTTLMKGLCLKGEVQK-SVHFHD-KVVAQGFQMNQVSYGTLLNGLCKI 170
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ A +F + + NVV Y T+++G C+ + V+ A EM GI PN I Y
Sbjct: 171 GETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITY 230
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
T+I G AG+ ++ ++ P + TY L+ CK G ++ A +L M
Sbjct: 231 TTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHY 290
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
RG TY F K ++ A L+ KM E G P++ TY L+ LCK +L
Sbjct: 291 RGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKD 350
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A ++ +++ +GC ID+ T ++I LC+ DEA A M G +P+ +TF+ +
Sbjct: 351 AQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIR 410
Query: 363 EFKKRGMTALAQKLCNVM 380
K+ A+KL + M
Sbjct: 411 SLFKKDENDKAEKLLHEM 428
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 35/306 (11%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + + +L + K+ A +M + + PN+VT L+ +C L ++ +
Sbjct: 49 TPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFS 108
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G +PN I T++ GL G ++ ++ + V+Y +L+ G C
Sbjct: 109 VLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLC 168
Query: 226 KAGDLEGASKILKM-----------------------------------MISRGFLPSPT 250
K G+ A K L+M M +RG P+
Sbjct: 169 KIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVI 228
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY F G++ A +L +MI P+ TY IL+ LCKE K+ A + EM
Sbjct: 229 TYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEM 288
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
RG D+ T T L+ C+ D+A+A F M G+ P+ T+ L D K G
Sbjct: 289 HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRL 348
Query: 371 ALAQKL 376
AQKL
Sbjct: 349 KDAQKL 354
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 6/278 (2%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V DA + M + TP +V +G ++ +++ AI L K+M +GIEPN + N
Sbjct: 33 VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+ G+ ++ + L P +T T+L+KG C G+++ + ++++G
Sbjct: 93 LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
F + +Y K G+ A+ R + +S + + Y+ ++ LCK+ ++ A
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
EM RG ++ T T LI C + A + +MI + + P+ T+ L D
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDAL 272
Query: 365 KKRGMTALAQKLCNVM------SSVPRSMELLDSRCKD 396
K G A+ L M + V LLD CK+
Sbjct: 273 CKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKN 310
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 161/317 (50%), Gaps = 6/317 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + A ++ AI N ++K + + IL+D+LCK+G+VK A
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLL----NEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
L P V Y+ L++G+F +K A+ + M VTP+V +Y L+ G+
Sbjct: 292 L--AVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGF 349
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + VD A+ L KEM ++ + P + Y+++IDGL ++GR V +++ +
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANV 409
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY SL+ G CK G L+ A + M +G P T+ K G+++DA ++
Sbjct: 410 ITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQD 469
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ GY D Y++++ CK+ L+ A+ + +M+ GC + T ++I+ L + +
Sbjct: 470 LLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDE 529
Query: 335 FDEASAEFEDMIRRGLV 351
D+A MI RGL+
Sbjct: 530 NDKAEKLLRQMICRGLL 546
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 162/341 (47%), Gaps = 6/341 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI+ G V A+ F + L + + + L++ +CK G + A +
Sbjct: 131 TFTTLIKGLCLKGQVNKAL---HFHDKL-LAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 186
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
RK + P V +YN +++ + + V +A + EM + ++ +VVTY TL+ G+
Sbjct: 187 V--RKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGF 244
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C ++ AI L+ EM + I PN YN ++D L + G+ +E ++ L P +
Sbjct: 245 CIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDV 304
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY++L+ GY +L+ A + M G P +Y F K V++A+NL+++
Sbjct: 305 ITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKE 364
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + P +TY L+ LCK ++ + EM+ RG ++ T LI LC+
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH 424
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D A A F M +G+ P TF L D K G AQ+
Sbjct: 425 LDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQE 465
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
++ P V YNIL++ + VK+A+ M K V P+V+TY TL++GY + + +
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKK 322
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A + M G+ P+ Y +I+G + +E + + P +VTY+SL+
Sbjct: 323 AQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CK+G + ++ M RG + TYN K G ++ A+ L+ KM + G P
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
T+ ILL LCK +L A + +++ +G +D+ ++I+ C+ +EA
Sbjct: 443 CSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTML 502
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
M G VP+ +TF + + K+ A+KL
Sbjct: 503 SKMEENGCVPNAVTFDIIINALFKKDENDKAEKL 536
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 6/297 (2%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + +N +L+ + + K+ A + + + P+++T L+ +C + ++
Sbjct: 56 TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G +P+ I + T+I GL G+ + ++ L V+Y +L+ G C
Sbjct: 116 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K GD GA K+++ + R P+ YN K+ V +A L+ +M G + D +
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ C KL AI + EM + + ++ T +L+ LC+ K EA M
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM 295
Query: 346 IRRGLVPHYLTFKRLND------EFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
++ + P +T+ L D E KK A L V V L++ CK+
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKN 352
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 114/258 (44%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+NV DA + M TP ++ + +++ + +++ A+ L + +GI+P+ I
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I+ G+ ++ + L P +T+T+L+KG C G + A +++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+G +Y K G A+ L RK+ P+ Y+ ++ LCK +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + EM +G D+ T T LI+ C K EA +M+ + + P+ T+ L D
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 363 EFKKRGMTALAQKLCNVM 380
K G A+ + VM
Sbjct: 278 ALCKEGKVKEAKNVLAVM 295
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
++ VD A+ M P I +N ++D + + + R + P ++T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
L+ +C G + +L ++ RG+ P T+ + G+V A++ + K++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G D+++Y L+ +CK AI++ +++ R +++ +I LC+
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216
Query: 337 EASAEFEDMIRRGLVPHYLTFKRL 360
EA F +M +G+ +T+ L
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTL 240
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 55/111 (49%)
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
+++++F V+DA++ + +M+ +TP + ++ +L K A+ +S
Sbjct: 25 SSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHR 84
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ +G DL T +LI+ C M + + +++RG PH +TF L
Sbjct: 85 LELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTL 135
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 162/329 (49%), Gaps = 7/329 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ +LC+ R + A + H + +P V YN +++G FR V A + E
Sbjct: 193 YNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHE 252
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V P+VVTY ++++ C+ R +D+A ++++M G +PN + YN +I G +G+
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQ 312
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E +GM P +VT S + CK G + A++ M ++G P+ TY+
Sbjct: 313 WKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSV 372
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G D +NL+ M +G D+ ++I++ K +D + + +M+ +G
Sbjct: 373 LLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQG 432
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T ++I RM + +A +F MI GL P + + L F G A+
Sbjct: 433 VIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAK 492
Query: 375 KLCNVMSS--VPRS-----MELLDSRCKD 396
+L + M S +PR +++S CK+
Sbjct: 493 ELVSEMMSRGIPRPNIVFFNSIINSLCKE 521
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 177/391 (45%), Gaps = 12/391 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L I P+ K T+ +I Y+ +G + F
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPN---KVTYNCMIHGYSISGQWKETAGMFREMT 324
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ N + S + SLCK G+ K A+E+F + P + Y++LL+G+
Sbjct: 325 SQGLMPNIVTCNSY----MSSLCKHGKSKEAAEFFDSMAA--KGHKPNLVTYSVLLHGYA 378
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
D + M + + + +++ Y + +D + + +M+++G+ P+A
Sbjct: 379 TEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDAC 438
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VI GR + + + P + Y SL++G+C G+L A +++ M
Sbjct: 439 TYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEM 498
Query: 241 ISRGFLPSPTT--YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+SRG +P P +N K G+V +A +++ +I G PD +T++ L+
Sbjct: 499 MSRG-IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVG 557
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K++ A V M G + D+ + LI CR + D+ F +M+ +G+ P +T+
Sbjct: 558 KIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYG 617
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
+ G T A+K+C+ M +M++
Sbjct: 618 IILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 162/346 (46%), Gaps = 7/346 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I+I Y + GM++ + F ++ + A + I++ + + GR+ A + F
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPD----ACTYGIVIAAFSRMGRLADAMDKF 460
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT-PNVVTYGTLVEGY 154
++ + P VY+ L+ G+ N+ A+ EM + PN+V + +++
Sbjct: 461 NQM--IAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSL 518
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ RV A + + G P+ I +N++IDG G+ E+ G+++ + P +
Sbjct: 519 CKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDV 578
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y +L+ GYC+ G ++ + M+S+G P+ TY G+ A + +
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MIESG T D T I+L LC+ + D AI + K++ ++ +I + ++ K
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRK 698
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+EA F+ + GLVP+ T+ + K G A + ++M
Sbjct: 699 REEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLM 744
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E R P V TY L++ CR RR L K G++ + IV + ++ L A
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAK 168
Query: 194 RFEEVSG-MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI--SRGFLPSPT 250
R ++V ++ R P ++Y ++VK C+ + A +L M+ S G P+
Sbjct: 169 RSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN + G+V A NL+ +M++ G PD +TY ++ LCK +D A V ++M
Sbjct: 229 TYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQM 288
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G + T +IH ++ E + F +M +GL+P+ +T K G +
Sbjct: 289 ISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS 348
Query: 371 ALAQKLCNVMSS 382
A + + M++
Sbjct: 349 KEAAEFFDSMAA 360
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 9/274 (3%)
Query: 26 EVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
E PD + TF LI Y G +E A + + + + S + L+D C+
Sbjct: 539 ERPDVI---TFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVS----YNTLIDGYCRN 591
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+ F + L + PT Y I+L+G F A++ EM + T ++
Sbjct: 592 GRIDDGLILFGEM--LSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T G ++ G CR D AI + K++ ++ N + NT+ID + + + EE + +
Sbjct: 650 TCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSI 709
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P TY ++K K G +E A + +M G PS NY R + G++
Sbjct: 710 SATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEI 769
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
A N K+ + + T +L+ + +E K
Sbjct: 770 VKAGNYMFKVDGKRISLEASTVSLLMALFSREGK 803
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 120/295 (40%), Gaps = 33/295 (11%)
Query: 74 LFEILLDSLCKQGRVKAASEYF----HKRKELD--------------------------- 102
F +++SLCK+GRV A + F H + D
Sbjct: 510 FFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM 569
Query: 103 --QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
P V YN L++G+ R+ + D + EM + V P +TYG ++ G R
Sbjct: 570 ISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRT 629
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A ++ EM + G + ++ GL +E M ++ + ++
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTM 689
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ K E A ++ + + G +P+ +TY + K G VE+A N++ M +SG
Sbjct: 690 IDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGC 749
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
P + ++++L ++ ++ A ++ + ++ T ++L+ L R K+
Sbjct: 750 APSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKY 804
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 150/302 (49%), Gaps = 4/302 (1%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I+L LC + R + A E H + P V Y+ + +G + + A + EM
Sbjct: 166 IILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREML 225
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ PNVVTY +++ C+ + +D+A+ + M K G+ PN Y +++ G +G+
Sbjct: 226 DRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLT 285
Query: 197 EVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E +E+ +C G P +VTY+S + CK G A KI M+ RG P TTY+
Sbjct: 286 EAIKFLEK--MCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSS 343
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + + L+ M++S PD ++ L+ K+ K+D A+ V +M+ +G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQG 403
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T LI+ C++ + + A A F++M+ G+ P+++T+ + + G T A+
Sbjct: 404 LKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAK 463
Query: 375 KL 376
+
Sbjct: 464 EF 465
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 3/284 (1%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASE---YFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
D G L ++ S G +K Y R+ LD+ P V Y+ ++ + + +
Sbjct: 190 DGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAM 249
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A M K VTPN TY +LV G+C ++ AI+ +++M G+EPN + Y++
Sbjct: 250 DKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSF 309
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+D L + GR E + + P + TY+SL+ GY G L + +M+
Sbjct: 310 MDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDM 369
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P +N +K GKV++AM ++ KM G P+ +TY+ L+ CK +++ A+
Sbjct: 370 QPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALA 429
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ +EM G + T +++ L R + A + +I+ G
Sbjct: 430 LFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSG 473
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 7/282 (2%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK--ENVTPNVVTYGTLVEGYCRLR 158
L + +R N L R RF R VTP V TYG L+ C
Sbjct: 45 LRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAG 104
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVT 216
R+D + + K+G I++N ++ GL R ++ ++ R + E G P + +
Sbjct: 105 RLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMT-ELGCVPNVFS 163
Query: 217 YTSLVKGYCKAGDLEGASKILKMMI--SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+T ++KG C + A ++L MM G LP+ +Y+ K G + A YR+
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYRE 223
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M++ P+ +TY ++ LCK +D A++V M G + T T L+H C +
Sbjct: 224 MLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA E M G+ P+ +T+ D K G A+K+
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 119/223 (53%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P VVT+G LV+G C+ R+ A LV+ M + G PNA+V+N ++D L + GR
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E G +E PT+VTY L+ G+CK L A +IL+ M RG P+ TYN
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K+GKV+DA+ L+R M E D Y L+ LC+ KL A + EM+ G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
C ++ LC+ + +EA F+ M G++P +LTF
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTF 223
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 144/283 (50%), Gaps = 2/283 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+D LCK R+ A E E + P V+N +++ + +A F
Sbjct: 13 FGILVDGLCKANRLTDAFELVEVMGE--RGCFPNALVFNGIMDALCKEGRSAEAYGFIET 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR V+P +VTY L++G+C+ ++ RA+ +++EM G EPN + YNT + GL + G+
Sbjct: 71 MRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + + YT+L+ G C+AG L A +L M + G +P P YN
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K ++ +A L+++M SG PD LT+ +++ C+ ++D A+ + ++MK G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LI L R + EA ++MI RGL P+ T+
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 138/290 (47%), Gaps = 13/290 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P V TF IL+ +A + A E N A +F ++D+LCK+G
Sbjct: 7 IPTVV---TFGILVDGLCKANRLTDAFELVEVMGERGCFPN----ALVFNGIMDALCKEG 59
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A + + + S PT+ YN+L++G+ + + + A EM PN VT
Sbjct: 60 RSAEAYGFIETMRSMGVS--PTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVT 117
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF- 205
Y T + G C+ +VD A+ L + M ++ I + Y T+IDGL +AG+ E +++
Sbjct: 118 YNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177
Query: 206 -LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
C P P Y +++ CK + A K+ K M G LP T+ + + +
Sbjct: 178 NSGCVPKPG--CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHR 235
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++DA+ L ++M +G P + Y+ L+ L + ++ A ++ +EM RG
Sbjct: 236 IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG 285
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
++ PTV + IL++G ++ + DA M + PN + + +++ C+ R
Sbjct: 3 EKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSA 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A ++ MR G+ P + YN +IDG + + +++ P VTY + +
Sbjct: 63 EAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G CK G ++ A + + M + Y + GK+ +A +L +M SG
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCV 182
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P Y+ +L LCK +++ A ++ K M G D T M++ CR ++ D+A
Sbjct: 183 PKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLL 242
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ M GL P + + L D + G + A +L M S
Sbjct: 243 LQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMIS 283
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G +P+ T+ K ++ DA L M E G P+ L ++ ++ LCKE +
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
A + M+ G + T +LI C+ K A ++M RG P+++T+
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYN 119
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 186/382 (48%), Gaps = 14/382 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L KAK F W L+ ++ + G VS +T +IRR ARAG + AI F
Sbjct: 213 MVDILGKAKNFRLMWELVDEMNHLAGS-----VSLETMSKVIRRLARAGRHQEAIHAFR- 266
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
N++ + + +L+D+L K+ V+ A F +EL S + +N+L++G
Sbjct: 267 --NIEKY-GISTDTTAMNVLMDALVKEASVEDAHNVF---RELKCSIPFNLASFNVLIHG 320
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++K + +A + E+ K + P+V++Y +E +CR + +++ +M +G +PN
Sbjct: 321 YCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPN 380
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I + ++ L +A + E + E+ P Y+SL+ KAG L +I++
Sbjct: 381 VITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVE 440
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M +G P TYN + E A+ L KM E PD TYH LLK+ C++
Sbjct: 441 DMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKK 500
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ + + M I+ T +L+ LC K A + F +M+ + +VP TFK
Sbjct: 501 RMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFK 560
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
L +E +++ M + + N+M
Sbjct: 561 MLKEELERKSMLEEMKIIENLM 582
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN+++D L +A F + +++ ++ T + +++ +AG + A + +
Sbjct: 210 YNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIE 269
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL-TYHILLKILCKEDKL 300
G T N K VEDA N++R++ S P L ++++L+ CK KL
Sbjct: 270 KYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCS--IPFNLASFNVLIHGYCKAKKL 327
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D A ++ E++ G + D+ + T I CR F M +G P+ +TF
Sbjct: 328 DEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITF 384
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 165/352 (46%), Gaps = 6/352 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ +AG ++ AI + + +V N + + +++D LCK+G+V A +
Sbjct: 341 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT----YTVMVDGLCKEGKVAVADDV 396
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ +Y L++G F +KN + A EM+ + + +V YGTL+ G
Sbjct: 397 LSLMER--AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGL 454
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+++++D A L+ +M G+ PN ++Y T++D +AG+ E ++ + P +
Sbjct: 455 CKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNV 514
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +L+ G CKAG + A M G P+ Y F K G + A++L +
Sbjct: 515 VTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNE 574
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M++ G + D++ Y L+ K+ L A + +M G +DL T I C M
Sbjct: 575 MVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNM 634
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRS 386
EA +MI G+ P + L +++K G A L N M SV S
Sbjct: 635 MQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESVLSS 686
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 155/327 (47%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I++D LCKQG + A F + K + S P V YN L++G+ + +++ E E
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCS--PDVVTYNSLIDGYGKCGELEEVELLVSE 259
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MRK +VVTY L+ + + +++A EM++ G+ N + +T +D + G
Sbjct: 260 MRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGL 319
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + V P TYTSLV G CKAG L+ A +L M+ +G +P+ TY
Sbjct: 320 VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 379
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV A ++ M +G + L Y L+ + A+ + EMK +G
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG----MT 370
++D+ LI LC++ K DEA + M GL P+ + + + D F K G
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499
Query: 371 ALAQKL--CNVMSSVPRSMELLDSRCK 395
AL K+ + +V L+D CK
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCK 526
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 4/270 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V++ LL+ + DA R +R+ V PN T ++ RL R +R LV+ +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHIL---LRLAR-NRQGGLVRRL 190
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ PN +N VID L + G E + R P +VTY SL+ GY K G+L
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E ++ M G TYN FSKFG +E A + + +M G + +T
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CKE + A+++ +M+ RG + T T L+ C+ + D+A ++M+ +GL
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
VP+ +T+ + D K G A+A + ++M
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLM 400
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 163/369 (44%), Gaps = 50/369 (13%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+D+ + L+D LCK G + AA K D AP V Y L++G +++
Sbjct: 3 ANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA--DAGCAPNVVTYTALIDGLCKARR 60
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
DA + M + P++VTY +L+ G C R+D A +++E+ + G PN I Y+T
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 185 VIDGLVEAGRFEEVSGMMERFLV----------------------------CEPG----- 211
++ R ++ G++ ++ C G
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180
Query: 212 ----PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY + + G CKAG L+ ++L+ M G P T+ K +++D
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC--RGCDIDLDTSTML 325
A +++ M+E G PD LTY I+L L + ++LD +V + M+ GC +++ T
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
I LCR KF A MI G +P+ L++ + D K G A KL
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKL--------- 351
Query: 386 SMELLDSRC 394
S ++LDS C
Sbjct: 352 SRKMLDSGC 360
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 4/280 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V YN ++G ++ + EM + + P+VVT+ +++ G C+ R+D A ++
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT--SLVKGY 224
K M + G P+++ Y+ ++D L A R + V ++E + G M YT + +
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PD 283
C++G A IL MI G LP+ +YN+ K G V+DA L RKM++SG PD
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ ++ L+ CK +L A Q+ EMK + C D+ T LI + +A
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLL 424
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++M G P+ +T+ L + + K GM A+ L + MS+
Sbjct: 425 QEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSA 464
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 145/294 (49%), Gaps = 7/294 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++D LCK G V A + RK LD P V +N L++G+ ++ + A + +
Sbjct: 332 YNFVIDGLCKSGNVDDA--WKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLI 389
Query: 134 EMRKENV-TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM+ +N+ P+VVTY TL++G + + +A L++EM+ G +PN + Y +I+G +
Sbjct: 390 EMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKH 449
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP--T 250
G +EE + + P ++TY +++ + KAG + A + + + ++ SP
Sbjct: 450 GMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAI 509
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-DLAIQVSKE 309
TY + + E + L ++M G++ D TY++L+ L + +++ A+ V ++
Sbjct: 510 TYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQ 569
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
M + C L+ L R + A + ++M +G + + LN E
Sbjct: 570 MLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEALNKE 623
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M G + + + Y T+IDGL ++G + ++++ P +VTYT+L+ G CKA
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A + +K M+ G P TYN +++DA + ++++ +G+ P+ +TY
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA---SAEFE--- 343
L+ C+ +LD A + +EM RG +++++ C ++ F EA S+ +E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRG-----SVCNLVVYIDC-IFGFCEARCQSSRYECRD 174
Query: 344 --DMIRRGLVPHYLTFKRLNDEFKKRG 368
+MI G +P +T+ K G
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAG 201
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 146/299 (48%), Gaps = 4/299 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ +CK G V+ A E + E S P +NIL+NG R+K V
Sbjct: 237 FNVVIKGVCKVGDVQKALELVERMDEFGCS--PDTVTHNILVNGLCRAKEVSKGREVLRR 294
Query: 135 MRKENVT-PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++++ V PNVVTY +++ GYC+ R++ A+ + +M G PN + YN +I+G +AG
Sbjct: 295 LQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAG 354
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ ++ ++ P +VT++SL+ GYC+ G L+ A KI M P+ T+
Sbjct: 355 NMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFC 414
Query: 254 YFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
F K + +A++ +KM + + P Y+ ++ +LCK K+D A + EM+
Sbjct: 415 IIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEE 474
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+GC D T T+LI C + EA F M+ G P + K GM
Sbjct: 475 KGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPG 533
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 41/266 (15%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENV-TPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
YN L++ + V+DA + + V +P+V ++ +++G C++ V +A+ LV+ M
Sbjct: 201 YNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERM 260
Query: 171 RKEGIEPNAIVYNTVIDGLV---EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+ G P+ + +N +++GL E + EV ++R VC P +VTYTS++ GYCKA
Sbjct: 261 DEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMP--NVVTYTSVISGYCKA 318
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G++EDAM +Y M+ G +P+ +TY
Sbjct: 319 -----------------------------------GRMEDAMAVYNDMVAVGTSPNVVTY 343
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
++L+ K + A+ V ++M R C D+ T + LI CR + D+A + +M +
Sbjct: 344 NVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQ 403
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALA 373
+ P+ TF + F K+ + A
Sbjct: 404 YHIQPNAHTFCIIIHTFCKQNRSGEA 429
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ +I Y +AG +E A+ + DMV + +L++ K G + +A
Sbjct: 307 TYTSVISGYCKAGRMEDAMAVYN-----DMVAVGTSPNVVTYNVLINGYGKAGNMGSAVA 361
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ ++ + + P V ++ L++G+ R + DA + W EM + ++ PN T+ ++
Sbjct: 362 VY--QQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHT 419
Query: 154 YCRLRRVDRAIRLVKEMR-KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
+C+ R A+ +K+M + I P A +YN VID L + G+ +E + ++ P
Sbjct: 420 FCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRP 479
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
TYT L+ G+C G + A M+ G P N F K G + ++
Sbjct: 480 DKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIM 539
Query: 273 R 273
R
Sbjct: 540 R 540
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA--IWTFEF 58
+I KA SA + I +PD V TF LI Y R G ++ A IWT E
Sbjct: 346 LINGYGKAGNMGSAVAVYQQMILRRCLPDVV---TFSSLIDGYCRCGQLDDAMKIWT-EM 401
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A + A F I++ + CKQ R + +F K+ + AP +YN +++
Sbjct: 402 AQ-----YHIQPNAHTFCIIIHTFCKQNR-SGEALHFLKKMNMRTDIAPQAFIYNPVIDV 455
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ V +A +EM ++ P+ TY L+ G+C R+ A+ +M + G P+
Sbjct: 456 LCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPD 515
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMM 202
+IV N+ I L+++G EV +M
Sbjct: 516 SIVVNSFISCLLKSGMPGEVDHIM 539
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 124/280 (44%), Gaps = 7/280 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+ Y +++ +S DA + + +M ++ + + + G C + A
Sbjct: 125 PSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAA 184
Query: 167 VKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVK 222
+ + G A YN ++D + GR ++ + E ++ + G P + ++ ++K
Sbjct: 185 LLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWI--QGGVYSPDVWSFNVVIK 242
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT- 281
G CK GD++ A ++++ M G P T+N + +V + R++ G
Sbjct: 243 GVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCM 302
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ +TY ++ CK +++ A+ V +M G ++ T +LI+ + A A
Sbjct: 303 PNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAV 362
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ MI R +P +TF L D + + G A K+ M+
Sbjct: 363 YQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMA 402
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 165/347 (47%), Gaps = 14/347 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEF 58
++ L ++ F+ AW +E+ + V D +F I+I+ G ++ +
Sbjct: 134 LLGSLVRSNCFEKAWLFF------NELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGL 187
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
++ + N ++ L+D CK G ++ A +F K E+ + +L+NG
Sbjct: 188 LQDMGLSPN----VVIYTTLIDGCCKNGDIERARLFFDKMGEM--GLVANQYTFTVLING 241
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
F+ KD + +M+ + PN+ TY L+ YC ++ RA L EMR+ G+E N
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEAN 301
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT+I G+ R E ++++ P ++TY +L+ G+C G+L+ AS +L
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ S G PS TYN +SK G + +L R+M G +P ++T +L+ +
Sbjct: 362 QLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQ 421
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+++ A Q+ M+ G D+ +LIH LC E+S F M
Sbjct: 422 EMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 162/352 (46%), Gaps = 41/352 (11%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ LI + G +E A F+ + +V N F +L++ L K+G K + F
Sbjct: 200 YTTLIDGCCKNGDIERARLFFDKMGEMGLVAN----QYTFTVLINGLFKKGLKKDGFDLF 255
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
K K P + YN L+N + + A + EMR+ V NVVTY TL+ G C
Sbjct: 256 EKMK--INGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMC 313
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R RV A +LV +M+K + PN I YNT+I G + G ++ S ++++ P++V
Sbjct: 314 REERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLV 373
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY L++GY KAG+ +G + + + M RG PS T + + ++E A +Y M
Sbjct: 374 TYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM 433
Query: 276 IESGYTPDRLTYHILLKILC-----------------------------------KEDKL 300
+ G PD Y +L+ LC KED
Sbjct: 434 EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNS 493
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
A+++ +EM+ +G ++ + + +I +LC+ K++EA + MI L P
Sbjct: 494 YRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKP 545
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 37/287 (12%)
Query: 133 LEMRKENVTPNVVT---YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
L +N P++ T Y +++ + + + +D+A+ EM +G+ ++N+++ L
Sbjct: 79 LHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSL 138
Query: 190 VEAGRFEEV----SGMMER--FLV----------CEPG------------------PTMV 215
V + FE+ + + ER F V CE G P +V
Sbjct: 139 VRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVV 198
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
YT+L+ G CK GD+E A M G + + T+ K G +D +L+ KM
Sbjct: 199 IYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKM 258
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+G P+ TY+ L+ C E K+ A + EM+ RG + ++ T LI +CR +
Sbjct: 259 KINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERV 318
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
EA + M + + P+ +T+ L F G A L + + S
Sbjct: 319 WEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKS 365
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 172/366 (46%), Gaps = 12/366 (3%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F+ L R YA AG++E ++ + AS + L+D+ K G + A +
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALT----ASAYNSLIDAFVKAGYTQKALAVY 112
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R P +N+L+N + ++K V + + EM+ +N +PNV+TY L++ C
Sbjct: 113 --RVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ V++A+++ +M+ G PN Y ++IDGL ++G ++ + E T V
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
Y SL+ G ++G + A+K+ + M+S+G P T+ G+ +A ++++
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G D Y++L+ LCK +LD A ++ E++ G D+ T L+ LC+ +
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRI 350
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------L 389
+A DM R G P + L D +K G A +L M S+ + L
Sbjct: 351 HDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL 410
Query: 390 LDSRCK 395
+D CK
Sbjct: 411 IDESCK 416
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 188/387 (48%), Gaps = 28/387 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ KAK DS W L + + P+ + T+ ILI + G VE A+ F
Sbjct: 130 LMNAFKKAKRVDSVWKLFEEMQNQNCSPNVI---TYSILIDAVCKCGGVEKALKVF---- 182
Query: 61 NLDMVKNFDSGASLFEI--LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LDM K+ ++F ++D L K G V A +F + + T VYN L++G
Sbjct: 183 -LDM-KSRGCRPNIFTYTSMIDGLGKSGHVDKA--FFLFEEMTSEGLVATRVVYNSLIHG 238
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
RS A + + EM + + P+ VT+ +LV G R A R+ +E R G +
Sbjct: 239 LGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALD 298
Query: 179 AIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGA 233
+YN +ID L ++ R +E + G +E E G P + T+ +L+ G CK+G + A
Sbjct: 299 VNLYNVLIDTLCKSKRLDEAWEIFGELE-----EDGLVPDVYTFNALMDGLCKSGRIHDA 353
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+L M G P T YN K G+VE+A L +M GY PD +TY+ L+
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDE 413
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR---GL 350
CK +++ A+++ +E+ +G + +T+L + LC + DEA F M + G+
Sbjct: 414 SCKGGRIEDALRLFEEISAKGFANTVTYNTIL-NGLCMAGRVDEAYKLFNGMKQETVDGV 472
Query: 351 V-PHYLTFKRLNDEFKKRGMTALAQKL 376
+ P ++T+ L + ++ G++ LA L
Sbjct: 473 IDPDFVTYTTLLNGARQAGLSELANSL 499
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 171/364 (46%), Gaps = 8/364 (2%)
Query: 19 LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
L ++ GH ++ + LI + +AG + A+ + + + F +L
Sbjct: 77 LKRMEGHRCA--LTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD----TYTFNVL 130
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+++ K RV + + F + + +Q+ +P V Y+IL++ + V+ A + +L+M+
Sbjct: 131 MNAFKKAKRVDSVWKLFEEMQ--NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSR 188
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
PN+ TY ++++G + VD+A L +EM EG+ +VYN++I GL +GR +
Sbjct: 189 GCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAA 248
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ + L P VT+TSLV G AG A +I + G YN
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K ++++A ++ ++ E G PD T++ L+ LCK ++ A + +MK GC D
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPD 368
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ LI L + + +EA +M G P +T+ L DE K G A +L
Sbjct: 369 VTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFE 428
Query: 379 VMSS 382
+S+
Sbjct: 429 EISA 432
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 169/364 (46%), Gaps = 9/364 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L + + FDS W I VPD + +L + + G + +L +
Sbjct: 208 LVRRRRFDSVWVDYQLMISRGLVPDV---HIYSVLFQCCFKQGFPSKKEKLLDEMTSLGV 264
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
N ++ I + LC++ +++ A + F K P + Y+ +++G+ ++ N
Sbjct: 265 KPN----VYIYTIYIRDLCRENKMEEAEKMFELMK--IHGVVPNLYTYSAMIDGYCKTGN 318
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
++ A + E+ + PNVV +GTLV+G+C+ R + A L M K G++PN VYN
Sbjct: 319 LRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNC 378
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G ++G E G++ P + TYT L+ G C L A+++ + M +
Sbjct: 379 LIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNER 438
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS TYN F K +E A++L +M SG P+ +T+ L+ CK + A+
Sbjct: 439 IFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAM 498
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ EM +G D+ T T LI + EA + DM+ G+ P+ TF L D F
Sbjct: 499 GLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 558
Query: 365 KKRG 368
K G
Sbjct: 559 WKEG 562
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 20/343 (5%)
Query: 19 LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
L KI G VP+ T+ +I Y + G + A ++ +++ N +F L
Sbjct: 293 LMKIHG-VVPNLY---TYSAMIDGYCKTGNLRQAYGLYKEILVAELLPN----VVVFGTL 344
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+D CK + AA F + P + VYN L++G +S N+ +A EM
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVD--PNLYVYNCLIHGQCKSGNMLEAMGLLSEMESL 402
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
N++P+V TY L+ G C R+ A RL + M+ E I P+++ YN++I G + E+
Sbjct: 403 NLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKA 462
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ P ++T+++L+ GYCK +++ A + M +G +P TY
Sbjct: 463 LDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDA 522
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ---------VSKE 309
K +++A+ LY M+E+G P+ T+ L+ KE +L AI K
Sbjct: 523 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKS 582
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ R C T LI LC+ AS F DM G+ P
Sbjct: 583 IVQRSC-WKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTP 624
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 175/387 (45%), Gaps = 19/387 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI K A+ L + + +P+ V F L+ + +A + AA F
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAELLPNVV---VFGTLVDGFCKARELVAARSLF---- 361
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ MVK D ++ L+ CK G + A + + L+ S P V Y IL+NG
Sbjct: 362 -VHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLS--PDVFTYTILINGL 418
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A R + M+ E + P+ VTY +L+ G+C+ +++A+ L EM G+EPN
Sbjct: 419 CTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNI 478
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I ++T+IDG + + G+ + P +VTYT+L+ + K +++ A ++
Sbjct: 479 ITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSD 538
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY--------RKMIESGYTPDRLTYHILL 291
M+ G P+ T+ F K G++ DA++ Y K I + + L+
Sbjct: 539 MLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLI 598
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ LC+ + A + +MK G D+ + ++ R + + DMI+ G++
Sbjct: 599 EGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGIL 658
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCN 378
P+ + + L +++ G A L N
Sbjct: 659 PNLMVNQLLAMFYQENGYLRSACFLTN 685
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 176/378 (46%), Gaps = 14/378 (3%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
M+ +L K K+FD W L+ +D+IG VS T ++RR A A AI F
Sbjct: 166 MVDILGKFKQFDLLWGLIRQMDEIGC-----LVSLATMTKVMRRLAGANRWTDAIDAFNK 220
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ +V++ + LLD+LCK+ VK A F +EL P +N L++G
Sbjct: 221 MDQFGVVRDTKA----MNALLDTLCKEKSVKRARGVF---QELRGVVPPDESSFNTLVHG 273
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W +++ + +A EM + +P+V+TY +L+E YC + ++ EM +G PN
Sbjct: 274 WCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPN 333
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I Y V+ L +AGR +E + ++ P Y S++ +AG LE A+ +
Sbjct: 334 VITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFD 393
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M G P+ +N + E+A+ + KM E PD TY LLK+ CK
Sbjct: 394 EMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQ 453
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ + + M + D T +L+ LCR K ++ E+M+ +G +P TF
Sbjct: 454 WMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFD 513
Query: 359 RLNDEFKKRGMTALAQKL 376
+ ++ K + + +K+
Sbjct: 514 LVMEKLDKGNLHSAKKKI 531
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 11/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG--GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I+++ K DSA + +G G + D F L+ Y +G V AI F
Sbjct: 35 LIRIVVSRKGKDSASAVFAAILGTKGTQRSDIY---VFSGLMTAYLESGFVHDAIQCFRL 91
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
FD+ + E L+ K K +++ ++ L+ + ++ +NI+++
Sbjct: 92 TKKHKFWVPFDTCRKVLEHLM----KLKYFKLVWDFY--KEILECGYPASLYFFNIVMHR 145
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + ++ A+ + + K + P+VV++ TL+ GY RL +D RL M G++P+
Sbjct: 146 FCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPD 205
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y+ +I+GL + + +E + + L P VT+T+L+ +CK G ++ A +I K
Sbjct: 206 VYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYK 265
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+S+GF P TYN K G ++ L +M +G PD++TY L+ CKE
Sbjct: 266 QMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEG 325
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L+ A + K M +D T L+ LC+ + D+A F +M+ GL P T+
Sbjct: 326 DLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYT 385
Query: 359 RLNDEFKKRGMTALAQKLCNVMS 381
+ +EF K+G A +L M
Sbjct: 386 MIINEFCKKGDVRTASRLLKEMQ 408
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F I++ CK+G ++ A F + W P+V +N L+NG+ R ++ + R
Sbjct: 138 FFNIVMHRFCKEGEMRRAQSVF----DAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ +VD A L EM G+ PN + + T+ID +
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + ++ L P ++TY +L+ G CK GDL+ ++ M G P T
Sbjct: 254 NGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MI+ D + Y L+ LC+E + D A ++ +EM
Sbjct: 314 YTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ AS ++M R G VP +T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I++ R+ + G + A F+ + + S F L++ + G + E F
Sbjct: 139 FNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVS----FNTLMNGYIRLGDL---DEGF 191
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + S P V Y++L+NG + V +A + EM + PN VT+ TL++ +
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVH 251
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ VD A+ + K+M +G P+ I YNT+I GL + G ++V +++ + P
Sbjct: 252 CKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDK 311
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYT+L+ G CK GDLE A + K MI Y + G+ +DA ++R+
Sbjct: 312 ITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFRE 371
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
M+ G PD TY +++ CK+ + A ++ KEM+ G
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%)
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K ++ G+ S +N F K G++ A +++ + + G P ++++ L+ +
Sbjct: 125 KEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LD ++ M G D+ T ++LI+ LC+ K DEA+ F +M+ RGLVP+ +TF
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTF 244
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
L D K GM A ++ M S S +L+
Sbjct: 245 TTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLI 277
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 174/369 (47%), Gaps = 11/369 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++ L K + D A+ L++ K+G VP+ + LI + G ++ A +
Sbjct: 336 LVDGLRKQGKIDDAYELVV-KVGRFGFVPNLF---VYNALINSLCKGGDLDKAELLY--- 388
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+N+ ++ N + IL+DS C+ GR+ A YF + + TV YN L+NG
Sbjct: 389 SNMSLM-NLRPNGITYSILIDSFCRSGRLDVAISYFDRM--IQDGIGETVYAYNSLINGQ 445
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++ AE ++EM + V P T+ +L+ GYC+ +V +A +L +M GI PN
Sbjct: 446 CKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNV 505
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +I GL + E S + + + + PT VTY L++GYC+ G ++ A ++L+
Sbjct: 506 YTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLED 565
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G +P TY G+V A + + + + + Y LL C+E +
Sbjct: 566 MHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR 625
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A+ S EM RG ++DL +LI + +DM +GL P + +
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTS 685
Query: 360 LNDEFKKRG 368
+ D + K G
Sbjct: 686 MIDTYSKEG 694
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ C+ + +A + + EL ++PT + L++G + + DA +++ +
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVEL--GFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGR 358
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
PN+ Y L+ C+ +D+A L M + PN I Y+ +ID +GR +
Sbjct: 359 FGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDV 418
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+R + G T+ Y SL+ G CK GDL A + M ++G P+ TT+
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K +V+ A LY KMI++G TP+ T+ L+ LC +K+ A ++ E+ R
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T +LI CR K D+A EDM ++GLVP T++ L
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 163/331 (49%), Gaps = 17/331 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI Y R G ++ A E + +V + + L+ LC GRV A ++
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD----TYTYRPLISGLCSTGRVSKAKDF 597
Query: 95 ---FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
HK Q+ Y+ LL+G+ + + +A EM + + ++V + L+
Sbjct: 598 IDDLHK-----QNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652
Query: 152 EGYCRLRRVDRA--IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+G L++ DR L+K+M +G+ P+ ++Y ++ID + G F++ + + E
Sbjct: 653 DG--ALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEE 710
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +VTYT+L+ G CKAG+++ A + K M + P+ TY F +K G +++A+
Sbjct: 711 CFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAI 770
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ M++ G + +T++I+++ CK + A +V EM G D T + LI+
Sbjct: 771 GLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEY 829
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
CR + ++ M+ RGL P + + L
Sbjct: 830 CRSGNVGASVKLWDTMLNRGLEPDLVAYNLL 860
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 169/399 (42%), Gaps = 36/399 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--- 57
+I L K + D A L + + P+ + T+ ILI + R+G ++ AI F+
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGI---TYSILIDSFCRSGRLDVAISYFDRMI 427
Query: 58 --------FANN-------------------LDMV-KNFDSGASLFEILLDSLCKQGRVK 89
+A N ++M K + A+ F L+ CK +V+
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + ++K +D P V + L++G + + +A + E+ + + P VTY
Sbjct: 488 KAFKLYNKM--IDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNV 545
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+EGYCR ++D+A L+++M ++G+ P+ Y +I GL GR + ++
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
+ Y++L+ GYC+ G L A MI RG + K +
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFF 665
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L + M + G PD + Y ++ KE A + M C ++ T T L++ L
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ + D A F+ M + P+ +T+ D K G
Sbjct: 726 CKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D+ K+G K A E + + + P V Y L+NG ++ + A +
Sbjct: 682 IYTSMIDTYSKEGSFKKAFECWDLM--VTEECFPNVVTYTALMNGLCKAGEMDRAGLLFK 739
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M+ NV PN +TYG ++ + + AI L M K G+ N + +N +I G + G
Sbjct: 740 RMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLG 798
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
RF E + ++ P VTY++L+ YC++G++ + K+ M++RG P YN
Sbjct: 799 RFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYN 858
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
G+++ A L M+ G PD
Sbjct: 859 LLIYGCCVNGELDKAFELRDDMLRRGIIPDN 889
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 146/353 (41%), Gaps = 26/353 (7%)
Query: 49 VEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT 108
++ A F N L + KN + + + I++ +L H R W
Sbjct: 80 LDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHAL------------VHSR----LFWPAN 123
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
++ +LL R + K +L+ K + + + LV+ Y R+ A+ +VK
Sbjct: 124 SLLHTLLL----RESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVK 179
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
M + P + +++GL++ +F V + + + P T +++V+ C+
Sbjct: 180 LMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELK 239
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
D A + ++ M + GF S TYN K +V +A+ + R + G D +TY
Sbjct: 240 DFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYC 299
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ C+ + + IQ+ EM G + L+ L + K D+A + R
Sbjct: 300 TLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRF 359
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV---PRSME---LLDSRCK 395
G VP+ + L + K G A+ L + MS + P + L+DS C+
Sbjct: 360 GFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCR 412
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 29/391 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A ++A+ L + G VPD T+ ILI +++AG+++ A N
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVY---TYTILIDCFSKAGIIKQA------HN 545
Query: 61 NLD-MVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
LD MV++ + + L+ + K +V A+E F + + P V Y L++G
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELM--IAKGCFPNVITYTALIDG 603
Query: 119 WFRSKNVKDAERFWLEMR--------------KENVT--PNVVTYGTLVEGYCRLRRVDR 162
+ +S N++ A + + MR K NV PNVVTYG LV+G C+ +V
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A L++ M +G EPN IVY+ +IDG +A + +E + + + P + TY+SL+
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID 723
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
K L+ K+L M+ P+ Y SK K ++A L M E G P
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY ++ K K+D +++ +EM +GC + T T+LI+ C DEA A
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
E+M + H ++ ++ + +K+ + +L
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGYKREFILSLG 874
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 28/366 (7%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +F+ A+ ++ + +G VPD T+ +I A VE A + F+
Sbjct: 462 RCLCGFGKFEKAYKVIHEMMGNGFVPD---TSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+V + + + IL+D K G +K A + + + PTV Y L++ + ++
Sbjct: 519 GVVPDVYT----YTILIDCFSKAGIIKQAHNWLDEM--VRDGCEPTVVTYTTLIHAYLKA 572
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
K V A + M + PNV+TY L++GYC+ +++A ++ MR + P+ +Y
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 632
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+ + + E P +VTY +LV G CKA ++ A +L+ M
Sbjct: 633 FKIKNNVAEK-------------------PNVVTYGALVDGLCKAHKVKDARDLLETMFV 673
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G P+ Y+ F K K+++A ++ KM+E GY P+ TY L+ L K+ +LDL
Sbjct: 674 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDL 733
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
++V +M C ++ T +I L ++ K DEA M +G P+ +T+ + D
Sbjct: 734 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 793
Query: 363 EFKKRG 368
F K G
Sbjct: 794 GFGKAG 799
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 22/297 (7%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK ++ A E FHK E + + P V Y+ L++ F+ K + +
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVE--RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLS 739
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + PN+V Y +++G ++ + D A +L+ M ++G +PN + Y +IDG +AG
Sbjct: 740 KMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ ++ + P VTYT L+ C G L+ A +L+ M
Sbjct: 800 KVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM----------KQT 849
Query: 254 YFFRYFSKFGKVED--------AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
Y+ ++ S + KV + ++ L ++ ++G P L Y +L+ K +L++A++
Sbjct: 850 YWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALE 909
Query: 306 VSKEMKCRGCDIDLDTS--TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ KE+ + + T LI+ K D A F DMIR G++P TF L
Sbjct: 910 LHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHL 966
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 20/330 (6%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS----KNVK 126
G ++ IL+ S+C G + + K ++ + + + + + R +
Sbjct: 412 GYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFE 471
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A + EM P+ TY ++ C RV+ A L KEM+ G+ P+ Y +I
Sbjct: 472 KAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILI 531
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
D +AG ++ ++ + PT+VTYT+L+ Y KA + A+++ ++MI++G
Sbjct: 532 DCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF 591
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD----------------RLTYHIL 290
P+ TY + K G +E A +Y +M PD +TY L
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK K+ A + + M GC+ + LI C+ K DEA F M+ RG
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P+ T+ L D K L K+ + M
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L +L+ C+ G A E + K D + PT YN L+ + R+ + A+
Sbjct: 208 LLNVLIRKCCRNGLWNVALEELGRLK--DFGYKPTRMTYNALVQVFLRADKLDTAQLVHR 265
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++ + T G + C++ + A+ L++ KE PN I+YN +I GL EA
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEAS 322
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
FEE + R P + TY L+ G L +IL MMI+ G PS T +N
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL------DLAIQVS 307
+ K A L +KM + P + Y+IL+ +C +L +LA +
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
EM G ++ LC KF++A +M+ G VP T+ +
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 495
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D K G+V E F R+ + AP Y +L+N + ++ +A E
Sbjct: 788 YTAMIDGFGKAGKVDKCLELF--REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M++ +V +Y ++EGY R ++ L++E+ K G P ++Y +ID V+AGR
Sbjct: 846 MKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGR 903
Query: 195 FEEVSGMMERFLVCEPGPTMVT--YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
E + + + T YTSL+ + A ++ A ++ MI G +P T+
Sbjct: 904 LEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963
Query: 253 NYFFRYFSKFGKVEDAMNL 271
+ + + E+A+ L
Sbjct: 964 VHLLMGLIRVRRWEEALQL 982
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 57 EFANNLDMVKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV 111
EF +L +++ + S L+++L+D+ K GR++ A E + S +
Sbjct: 868 EFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNL 927
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
Y L+ + + + A + +M ++ V P++ T+ L+ G R+RR + A++L
Sbjct: 928 YTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 56 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLKYFKLVWGFY 111
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 112 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + + +G+ + LV P V
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 229
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 289
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 290 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 349
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 350 VDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ 395
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 125 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+++ C+ + S ++M R G P +T+ L
Sbjct: 361 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVL 409
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ N S +F L+ + + G ++ A E + +E + W P +L +
Sbjct: 39 FAAVLETXGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRKVLEH 97
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 98 -LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRP 156
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G +E + L P + TY+ L+ G CK ++GA+ +
Sbjct: 157 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLF 216
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+
Sbjct: 217 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 276
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + EM +G D T T LI C+ D A + MI+ + + +
Sbjct: 277 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 336
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L + G + A+K+ M SV
Sbjct: 337 TALISGLCQEGRSVDAEKMLREMLSV 362
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 156 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 208
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+ F + L + P + L++G ++ V A + +M +++ P+++TY
Sbjct: 209 MDGANGLFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 266
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ Y T+IDG + G + +R +
Sbjct: 267 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 326
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 327 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWK 386
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 387 GSKLLKEMQRDGHAPSVVTYNVLM 410
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 44/253 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A L + + VP+ V TF LI + + G V+ A+ ++
Sbjct: 199 LINGLCKESKMDGANGLFDEMLVKGLVPNGV---TFTTLIDGHCKNGRVDLAMEIYKQML 255
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ + + + L+ LCK+G +K A + + + P Y L++G
Sbjct: 256 SQSLLPDLIT----YNTLIYGLCKKGDLKQAHDLIDEMSM--KGLKPDKFTYTTLIDGCC 309
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ A M +EN+ + V Y L+ G C+ R A ++++EM G++P+
Sbjct: 310 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDT- 368
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
TYT +V +CK GD+ SK+LK M
Sbjct: 369 ----------------------------------GTYTMIVNEFCKKGDVWKGSKLLKEM 394
Query: 241 ISRGFLPSPTTYN 253
G PS TYN
Sbjct: 395 QRDGHAPSVVTYN 407
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 260 LPDLITYNT---LIYGLCKKGDLKQA---HDLIDEMSM-KGLKPDKFTYTTLIDGCCKEG 312
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E H+++ + ++ Y L++G + DAE+ EM + P+ T
Sbjct: 313 DLDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 370
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
Y +V +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 371 YTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 162/334 (48%), Gaps = 9/334 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD VS F LI ++R ++ A+ F +V + ++ +L+ C+ G
Sbjct: 255 VPDLVS---FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD----NVIYTVLMHGYCRNG 307
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + + + L+Q V YN +LNG + K + DA++ + EM + P+ T
Sbjct: 308 NMLEALKI--RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT 365
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ TL+ G+C+ + +A+ L M + I+P+ + YNT+IDG + G E+ S + + +
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 425
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +TY L+ YC G + A ++ +MI +G P+ T N + + + G
Sbjct: 426 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 485
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A +MI G PD ++Y+ L+ +ED +D A +M+ G D+ T +++
Sbjct: 486 KADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVM 545
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ CR + EA MI +G+ P T+ L
Sbjct: 546 NGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 12/367 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F +LIR Y +A + F + + + ++ SL L L K V+ A E
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSL----LGGLVKIDWVELAWEV 105
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R+ + V NI++N + D + F EM + ++VTY TL+ Y
Sbjct: 106 --HREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR ++ A ++ M +G++P+ YN +I+GL + GR+ G++ L P
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY +L+ C+ + A +I M+ +G +P +++ FS+ ++ A+ +R
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G PD + Y +L+ C+ + A+++ EM +GC +D+ +++ LC+
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 343
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS------VPRSME 388
+A F++M+ RG +P + TF L + G A L M+ +
Sbjct: 344 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 403
Query: 389 LLDSRCK 395
L+D CK
Sbjct: 404 LIDGFCK 410
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 183/438 (41%), Gaps = 79/438 (18%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K +FD L + G D V+ +T LI Y R G++E A FE N
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNT---LIGAYCREGLLEEA---FEIMN 177
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ K + +++ LCK+GR A + L+ +P YN LL
Sbjct: 178 SM-ADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM--LNIGLSPDTTTYNTLLVESC 234
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R N +A+ + EM ++ V P++V++ +L+ + R R +D+A+ ++M+K G+ P+ +
Sbjct: 235 RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV 294
Query: 181 V-----------------------------------YNTVIDGLVEAGRFEEVSG----M 201
+ YNT+++GL + + M
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Query: 202 MERFLV-------------CEPG------------------PTMVTYTSLVKGYCKAGDL 230
+ER + C+ G P +V Y +L+ G+CK G++
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E AS++ MISR P+ TY + G V +A L+ MIE G P +T + +
Sbjct: 415 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 474
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+K C+ A + M +G D + LI+ R D+A M + GL
Sbjct: 475 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGL 534
Query: 351 VPHYLTFKRLNDEFKKRG 368
+P +T+ + + F ++G
Sbjct: 535 LPDIITYNVVMNGFCRQG 552
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 17/283 (6%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K K A L + + +PDF TF LI + + G + A+ F
Sbjct: 338 LCKEKMLTDADKLFDEMVERGALPDFY---TFTTLIHGHCQDGNMTKALSLFGTMTQ--- 391
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+N + L+D CK G ++ ASE + + + P Y IL+N + +
Sbjct: 392 -RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM--ISRKIFPNHITYGILINAYCSVGH 448
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V +A R W M ++ + P +VT T+++GYCR +A + M +G+ P+ I YNT
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 185 VIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+I+G V ++ ++ M + L+ P ++TY ++ G+C+ G ++ A +L+ M
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLL----PDIITYNVVMNGFCRQGRMQEAELVLRKM 564
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
I +G P +TY + +A + +M++ G+ PD
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 145/311 (46%), Gaps = 8/311 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I++++LCK G+ + + E + +A V YN L+ + R +++A
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSE-MEGNGIYADMV-TYNTLIGAYCREGLLEEAFEIMNS 178
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P++ TY ++ G C+ R RA ++ EM G+ P+ YNT+ LVE+ R
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL---LVESCR 235
Query: 195 ---FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
F E + L P +V+++SL+ + + L+ A + M G +P
Sbjct: 236 RDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVI 295
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y + + G + +A+ + +M+E G D + Y+ +L LCKE L A ++ EM
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV 355
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
RG D T T LIH C+ +A + F M +R + P + + L D F K G
Sbjct: 356 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 415
Query: 372 LAQKLCNVMSS 382
A +L + M S
Sbjct: 416 KASELWDGMIS 426
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 131/329 (39%), Gaps = 62/329 (18%)
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC---------------------RL 157
+ RS+ + DA+ L M + + V LV C +L
Sbjct: 5 FVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKL 64
Query: 158 RRVDRAIRLV--------------------------------KEMRKEGIEPNAIVYNTV 185
R A R++ +E+ + GIE N N +
Sbjct: 65 REGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIM 124
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
++ L + G+F++V + MVTY +L+ YC+ G LE A +I+ M +G
Sbjct: 125 VNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGL 184
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
PS TYN K G+ A + +M+ G +PD TY+ LL C+ D A +
Sbjct: 185 KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 244
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ EM +G DL + + LI + R D+A F DM + GLVP + + L +
Sbjct: 245 IFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 304
Query: 366 KRGMTALAQKLCNVMSSVPRSMELLDSRC 394
+ G N++ ++ E+L+ C
Sbjct: 305 RNG---------NMLEALKIRDEMLEQGC 324
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P V+ +T +I+ Y R+G A EF + + K + L++ ++
Sbjct: 466 PTLVTCNT---VIKGYCRSGDSSKAD---EFLGRM-IAKGVAPDHISYNTLINGFVREDN 518
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + +K ++ + P + YN+++NG+ R +++AE +M ++ + P+ TY
Sbjct: 519 MDKAFLWINKMEK--EGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTY 576
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
L+ G+ ++ A R EM + G P+ +
Sbjct: 577 TALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 11/349 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ LI AG ++ A+ F + DM ++ L+ LC R +
Sbjct: 225 SYATLIEGLCEAGRIDEAVELFGEMDQPDM--------HMYAALVKGLCNAERGEEGLLM 276
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ KEL W P+ R Y +++ R + K+AE EM ++ + P VVT ++ Y
Sbjct: 277 LRRMKEL--GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 334
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R+ A+R+++ M+ G +PN YN ++ G G+ + ++ + C P
Sbjct: 335 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDA 394
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L++G C G +E A ++L++M G + TYN K G+ + A +L+
Sbjct: 395 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 454
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G P+ +T++ L+ LCK K D+A + ++M GC D T + I LC+M
Sbjct: 455 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 514
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK-RLNDEFKKRGMTALAQKLCNVMSS 382
E + +M+++ + P + + ++ K+R +A+ ++SS
Sbjct: 515 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 563
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 41/347 (11%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + ++ SLC++ + A Y + W P +N L+ G+ R+ V A
Sbjct: 153 APTYNAVIRSLCRRADLARALRYLSLM--VRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ +M +VV+Y TL+EG C R+D A+ L EM +P+ +Y ++ GL
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCN 266
Query: 192 AGRFEEVSGMMERF--LVCEP---------------------------------GPTMVT 216
A R EE M+ R L P P +VT
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
T+++ YCK G + A ++L++M RG P+ TYN + F GKV AM L KM
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G PD +TY++L++ C + ++ A ++ + M+ G D T LI+ LC+ + D
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+A + F+ + RG+ P+ +TF L + K G +A K M S
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 493
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 2/306 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++++ CK+GR+ A K + P V YN L+ G+ V A +MR
Sbjct: 330 VINAYCKEGRMSDALRVLELMKL--RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
V P+ VTY L+ G C ++ A RL++ M +G+ + YN +I+ L + GR ++
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 447
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + P VT+ SL+ G CK+G + A K L+ M+S G P TY+ F
Sbjct: 448 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 507
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K ++ ++ +M++ P + Y I++ L KE L + EM GC+
Sbjct: 508 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 567
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ T T + C + +EA +M + G+ + + L D G T A +
Sbjct: 568 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 627
Query: 378 NVMSSV 383
M+SV
Sbjct: 628 KQMTSV 633
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 122/258 (47%), Gaps = 10/258 (3%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
APT YN ++ R ++ A R+ M + P+ T+ +L+ GYCR +VD A
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS---GMMERFLVCEPGPTMVTYTSLVK 222
L +M G + + Y T+I+GL EAGR +E G M++ P M Y +LVK
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ-------PDMHMYAALVK 262
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G C A E +L+ M G+ PS Y + + K ++A + ++M E G P
Sbjct: 263 GLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAP 322
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+T ++ CKE ++ A++V + MK RGC ++ T L+ C K +A
Sbjct: 323 CVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLL 382
Query: 343 EDMIRRGLVPHYLTFKRL 360
M G+ P +T+ L
Sbjct: 383 NKMRACGVNPDAVTYNLL 400
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 163/412 (39%), Gaps = 62/412 (15%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LL+K+ V PD V T+ +LIR G +E+A ++ + +
Sbjct: 381 LLNKMRACGVNPDAV---TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD----QYTYN 433
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+++LCK GR A F + + P +N L+NG +S A +F +M
Sbjct: 434 ALINALCKDGRTDQACSLFDSLET--RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
TP+ TY + +E C+++ + + EM ++ ++P+ + Y VI L++ +
Sbjct: 492 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 551
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
V+ + P +VTYT+ ++ YC G L A +L M G YN
Sbjct: 552 LVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 611
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK----EDKLDL---------- 302
+ G+ + A+++ ++M P++ TY ILL+ L + ED L L
Sbjct: 612 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE 671
Query: 303 --------------------------------------AIQVSKEMKCRGCDIDLDTSTM 324
A + MK ++ D T
Sbjct: 672 LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTA 731
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
L+ C+ ++ +A MI+ G +P ++++ L G T A+++
Sbjct: 732 LVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 783
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 154/395 (38%), Gaps = 65/395 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K+ + D AW L + PD + +F+
Sbjct: 470 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI----------------------- 506
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGW 119
+ LCK +K + E E L + P+ Y I+++
Sbjct: 507 -------------------EHLCK---MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 544
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +N R W EM P+VVTY T + YC R++ A ++ EM K G+ +
Sbjct: 545 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 604
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK----------------- 222
+ YNT++DG G+ + ++++ P TY L++
Sbjct: 605 MAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPA 664
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G KA +L + +M FLP+ TY+ FS+ G+ E+A +L M E +
Sbjct: 665 GVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISL 724
Query: 283 DRLTYHILLKILCKEDK-LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
+ Y L+ CK + LD + V ++ + +L L+C + D+A
Sbjct: 725 NEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICE-GQTDKAKEI 783
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F + + P + +K + D K+G + +++++
Sbjct: 784 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREM 818
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 31/202 (15%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT TY ++++ C+ DL A + L +M+ G+ P T+N + + +V+ A
Sbjct: 149 PAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVAR 208
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK----------CRG-CDID 318
+L+ KM G+ D ++Y L++ LC+ ++D A+++ EM +G C+ +
Sbjct: 209 DLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAE 268
Query: 319 LDTSTML--------------------IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+L + CR K EA ++M +GL P +T
Sbjct: 269 RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCT 328
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
+ + + K G + A ++ +M
Sbjct: 329 AVINAYCKEGRMSDALRVLELM 350
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 65/146 (44%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P Y+ +L G+ ++A M++++++ N Y LV +C+ +R A L
Sbjct: 689 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 748
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
V M + G P + Y ++ GL+ G+ ++ + + P + + ++ G K
Sbjct: 749 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 808
Query: 227 AGDLEGASKILKMMISRGFLPSPTTY 252
G + + +++ M+ PS TY
Sbjct: 809 KGHSDISREMIIMLERMNCRPSHQTY 834
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 162/336 (48%), Gaps = 14/336 (4%)
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS 104
R G V++ + F NLD+ S I+LD LCK+G V+ RK +D+
Sbjct: 206 RGGQVDSCLRFFRRMVNLDVEVTVYS----LTIVLDGLCKRGDVEMG------RKLMDEV 255
Query: 105 WAPTVR----VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
A V+ YN + G+F+ ++ M KE V NVVTY L+ G+ + ++
Sbjct: 256 AAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKI 315
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A RL +EMR++GIE + VY ++I +G + + + P+ TY +L
Sbjct: 316 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGAL 375
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CKAG +E A ++ M +G +P +N + + G V++A+ L M + G
Sbjct: 376 IHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL 435
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
D Y+ + LCK ++ D A + M RG + + T LI + C+ F EA
Sbjct: 436 ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKR 495
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F +M +G VP+ +T+ L D + KRG A KL
Sbjct: 496 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 531
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 166/328 (50%), Gaps = 10/328 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI ++ G +E A FE K ++ ++ ++ C+ G VK A
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMRE----KGIEADVYVYTSIISCNCRSGNVKRALVL 356
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + D+ P+ Y L++G ++ ++ A+ EM+ + + N V + TL++GY
Sbjct: 357 FDEMT--DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C VD A+RL M K+G+E + YN++ GL + R +E G++ F + E G P
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL--FSMVERGVSP 472
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+++T+L+ YCK G+ A ++ + M +G +P+ TYN +SK G +++A L
Sbjct: 473 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 532
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++ G PD T L+ C + K+D+A+++ EM RG ++ T T +I L +
Sbjct: 533 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 592
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +EA +++M GL P + L
Sbjct: 593 GRSEEAFKLYDEMKETGLTPDDTVYSSL 620
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 159/308 (51%), Gaps = 6/308 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ G+++ A F + +E + V VY +++ RS NVK A + E
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMRE--KGIEADVYVYTSIISCNCRSGNVKRALVLFDE 359
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+ TYG L+ G C+ +++ A LV EM+ +GI+ N +++NT+IDG E+G
Sbjct: 360 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 419
Query: 195 FEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+E + + ++ + G + Y S+ G CK + A +L M+ RG P+ ++
Sbjct: 420 VDE--ALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 477
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K G +A ++R+M E G P+ +TY++L+ K + A ++ E++
Sbjct: 478 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 537
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
RG D+ T T LIH C K D A F++M +RGLVP+ +T+ + K G +
Sbjct: 538 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 597
Query: 373 AQKLCNVM 380
A KL + M
Sbjct: 598 AFKLYDEM 605
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ LI +AG +EAA + N K D +F L+D C+ G V A
Sbjct: 368 SAHTYGALIHGVCKAGQMEAA----QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEA 423
Query: 92 S--EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+ ++K L+ V YN + +G + +A+ M + V+PN +++ T
Sbjct: 424 LRLQVVMEKKGLESD----VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++ YC+ A R+ +EM ++G PN I YN +IDG + G +E + +
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + T TSL+ G C G ++ A K+ M RG +P+ TY SK G+ E+A
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDK-LDLAIQVSK 308
LY +M E+G TPD Y L+ L D+ + + IQ S+
Sbjct: 600 KLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQIQGSQ 639
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R +VD +R + M +E V+DGL + G E +M+ +V
Sbjct: 206 RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVV 265
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY + ++GY K DL G ++IL +M G + TY FS GK+E+A L+ +M
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
E G D Y ++ C+ + A+ + EM +G T LIH +C+ +
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 385
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ A +M +G+ + + F L D + + GM A +L VM
Sbjct: 386 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 430
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 163 AIRLVKEMRKEGI---EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A+ + M K+G E + +VY + L G+ + R + + T+ + T
Sbjct: 178 ALEAFEHMEKKGFHIDERSCLVY---LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR-YFSK--FGKVEDAMNLYRKMI 276
++ G CK GD+E K++ + ++G + TYN F YF + G V + + L K
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK-- 292
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G + +TY +L+ K++ A ++ +EM+ +G + D+ T +I CR
Sbjct: 293 -EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F++M +GL+P T+ L K G AQ L N M
Sbjct: 352 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 395
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 119/223 (53%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ P VVT+G LV+G C+ R+ A LV+ M + G PNA+V+N ++D L + GR
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E G +E PT+VTY L+ G+CK L A +IL+ M RG P+ TYN
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K+GKV+DA+ L+R M E D Y L+ LC+ KL A + EM+ G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
C ++ LC+ + +EA F+ M G++P +LTF
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTF 223
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 2/283 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+D LCK R+ A E E + P V+N +++ + +A +
Sbjct: 13 FGILVDGLCKANRLTDAFELVEVMAE--RGCFPNALVFNGIMDALCKEGRSAEAYGYIET 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR V+P +VTY L++G+C+ ++ RA+ +++EM G EPN + YNT + GL + G+
Sbjct: 71 MRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + + YT+L+ G C+AG L A +L M + G +P P YN
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K ++ +A L+++M SG PD LT+ +++ C+ ++D A+ + ++MK G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LI L R + EA ++MI RGL P+ T+
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 13/290 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P V TF IL+ +A + A E N A +F ++D+LCK+G
Sbjct: 7 IPTVV---TFGILVDGLCKANRLTDAFELVEVMAERGCFPN----ALVFNGIMDALCKEG 59
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A Y + + S PT+ YNIL++G+ + + + A EM PN VT
Sbjct: 60 RSAEAYGYIETMRSMGVS--PTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVT 117
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF- 205
Y T + G C+ +VD A+ L + M ++ I + Y T+IDGL +AG+ E +++
Sbjct: 118 YNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177
Query: 206 -LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
C P P Y +++ CK + A K+ K M G LP T+ + + +
Sbjct: 178 NSGCVPKPG--CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHR 235
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++DA+ L ++M +G P + Y+ L+ L + ++ A ++ +EM RG
Sbjct: 236 IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG 285
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
++ PTV + IL++G ++ + DA M + PN + + +++ C+ R
Sbjct: 3 EKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSA 62
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A ++ MR G+ P + YN +IDG + + +++ P VTY + +
Sbjct: 63 EAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G CK G ++ A + + M + Y + GK+ +A +L +M SG
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCV 182
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P Y+ +L LCK +++ A ++ K M G D T M++ CR ++ D+A
Sbjct: 183 PKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLL 242
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ M GL P + + L D + G + A +L M S
Sbjct: 243 LQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMIS 283
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G +P+ T+ K ++ DA L M E G P+ L ++ ++ LCKE +
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
A + M+ G + T +LI C+ K A ++M RG P+++T+
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYN 119
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 158/305 (51%), Gaps = 3/305 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ CK G+ S YF + +++ + P V + L+ G+F KN++ A R +E+ +
Sbjct: 84 LLNRSCKAGKFNE-SLYFLECL-VNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILE 140
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ P+V Y ++ G+C++ +++ A +++ M+ G P+ + YN +I L +
Sbjct: 141 SHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL 200
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++++ L+ PT++TYT L++ G + A K+L+ M++RG LP TYN R
Sbjct: 201 ALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 260
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G VE A L + G PD ++Y+ILL+ + K D ++ EM RGC+
Sbjct: 261 GMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 320
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T ++LI LCR + DEA + + MI + L P ++ L K G LA +
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380
Query: 378 NVMSS 382
+ M S
Sbjct: 381 DYMIS 385
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 158/348 (45%), Gaps = 6/348 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI G + A+ E + + + ++ +CK+G V+ A+E
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEM----LARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P V YNILL + + E+ EM PN VTY L+
Sbjct: 275 ITSLTS--KGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR R+D AI ++K M ++ + P+ Y+ +I L + GR + G+M+ + P +
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V Y +++ CK G+ A +I + G P+ ++YN G A+ +
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G PD +TY+ L+ LC++ ++ AI + +M+ G + + +++ LC++ +
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
D+A F +MI +G P+ T+ L + G A +L N + S
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 7/340 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L+ R +AG +++ E N K + L L+ ++ AS
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVN----KGYTPDVILCTKLIKGFFNFKNIEKASRVMEI- 138
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
L+ P V YN +++G+ + ++ A + M+ P++VTY ++ C R
Sbjct: 139 --LESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
++ A+ ++ ++ + P I Y +I+ + G E ++E L P M TY
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++++G CK G +E A++++ + S+G P +YN R F GK ++ L +M
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+++TY IL+ LC+ ++D AI V K M + D + LI LC+ + D A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ MI G +P + + + K G A ++ N
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 416
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 23/281 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF-- 58
+I L + D A +L I PD S D LI + G ++ AI ++
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP---LISALCKEGRLDLAIGIMDYMI 384
Query: 59 ANN-LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+N L + N+++ +L +LCK G A E F+K + + P V YN +++
Sbjct: 385 SNGCLPDIVNYNT-------ILAALCKNGNANQALEIFNKLRGM--GCPPNVSSYNTMIS 435
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + A M + + P+ +TY +L+ CR V+ AI L+ +M + G P
Sbjct: 436 ALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 495
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
I YN V+ GL + R ++ GM + P TY L++G AG A ++
Sbjct: 496 TVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELA 555
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+ SR + + F + K +++Y+++ S
Sbjct: 556 NSLFSRDVISQDS--------FKRLNKTFPMLDVYKELSNS 588
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 145/306 (47%), Gaps = 4/306 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A F IL+ LC G V A E S P + YNILL+G R V A
Sbjct: 213 AFTFNILIRGLCTAGDVDEAFELLGDMGSFGCS--PDIVTYNILLHGLCRIDQVDRARDL 270
Query: 132 WLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
E+ K PNVV+Y T++ GYCRL ++D A L EM + G +PN ++ ++DG V
Sbjct: 271 LEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFV 330
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+AG GM ++ L P ++T TSL+ GYC+AG + + + M +R +
Sbjct: 331 KAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLY 390
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ K ++++A NL R + +S P Y+ ++ CK +D A + EM
Sbjct: 391 TYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEM 450
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ C D T T+LI C + EA F M+ G P +T + L+ K GM
Sbjct: 451 E-EKCKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMP 509
Query: 371 ALAQKL 376
A ++
Sbjct: 510 GEAARI 515
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V VYN LN + + DA + E+ + + + T+ L+ G C VD A L+
Sbjct: 178 VIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLG 237
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF-LVCEPGPTMVTYTSLVKGYCKA 227
+M G P+ + YN ++ GL + + ++E L CE P +V+YT+++ GYC+
Sbjct: 238 DMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRL 297
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
++ AS + M+ G P+ T++ F K G + A+ +++K++ G P+ +T
Sbjct: 298 SKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITL 357
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L+ C+ ++ + + +EM R +L T ++LI LC+ + EA + +
Sbjct: 358 TSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQ 417
Query: 348 RGLVPHYLTFKRLNDEFKKRG 368
+VP + + D + K G
Sbjct: 418 SDIVPLAFVYNPVIDGYCKSG 438
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 134/319 (42%), Gaps = 36/319 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------I 53
+I+ L A + D A+ LL D PD V T+ IL+ R V+ A
Sbjct: 219 LIRGLCTAGDVDEAFELLGDMGSFGCSPDIV---TYNILLHGLCRIDQVDRARDLLEEVC 275
Query: 54 WTFEFANNLDM----------VKNFDSGASLFEILLDSLCK----------QGRVKA--- 90
EFA N+ + D +SLF ++ S K G VKA
Sbjct: 276 LKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDM 335
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
AS +K L AP V L+NG+ R+ V W EM N+ N+ TY L
Sbjct: 336 ASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVL 395
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM-ERFLVCE 209
+ C+ R+ A L++ +++ I P A VYN VIDG ++G +E + ++ E C+
Sbjct: 396 ISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKCK 455
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +T+T L+ G+C G A I M++ G P T K G +A
Sbjct: 456 PDK--LTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAA 513
Query: 270 NLYRKMIESGYTPDRLTYH 288
+ + E+ + + +YH
Sbjct: 514 RIKETLFENQESILKKSYH 532
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 9/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +LL SLC+ G +A + + Q P R+ L++ + + ++ E
Sbjct: 111 YNMLLRSLCQAGLHNSAKLLYDSMRSDGQ--LPDSRLLGFLVSSFALADRFDVSKELLAE 168
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ V +V+ Y + + R+D AI L +E+ + +A +N +I GL AG
Sbjct: 169 AQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGD 228
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK-MMISRGFLPSPTTYN 253
+E ++ P +VTY L+ G C+ ++ A +L+ + + F P+ +Y
Sbjct: 229 VDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYT 288
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + K+++A +L+ +M+ SG P+ T+ L+ K + A+ + K++
Sbjct: 289 TVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFH 348
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
GC ++ T T LI+ CR + + +M R + + T+ L K A
Sbjct: 349 GCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEA 408
Query: 374 QKLCNVMSS---VPRSM---ELLDSRCK 395
+ L ++ VP + ++D CK
Sbjct: 409 RNLLRILKQSDIVPLAFVYNPVIDGYCK 436
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 15/180 (8%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY L++ C+AG A + M S G LP + F+ + + + L +
Sbjct: 110 TYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEA 169
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE-MKCRGCDIDLDTSTMLIHLLCRMYK 334
SG D + Y+ L IL K ++LD AI + +E M+ C +D T +LI LC
Sbjct: 170 QCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSC-LDAFTFNILIRGLCTAGD 228
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
DEA DM G P +T+ L LC + V R+ +LL+ C
Sbjct: 229 VDEAFELLGDMGSFGCSPDIVTYN------------ILLHGLCRI-DQVDRARDLLEEVC 275
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 167/361 (46%), Gaps = 41/361 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I ++G+VEAA F + ++ + + + LL+ CK G +K A
Sbjct: 1227 TYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVIT----YNSLLNGYCKAGNLKEALLL 1282
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + APTV YNIL++G+ R ++++A EM ++ PNV TY L++G
Sbjct: 1283 FGDLRR--AGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGS 1340
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNT------------------------------ 184
+R + A EM +G++P+ YNT
Sbjct: 1341 LNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDT 1400
Query: 185 -----VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+I GL + G ++ + + + P +TYT L+ +C+ G L A KI
Sbjct: 1401 VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN 1460
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MIS G LPS T+ + + G + A +RKM+E G P+ +TY++L+ LC+ +
Sbjct: 1461 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 1520
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LA EM RG + T T+LI C++ +++A + +M + G+ P YLT K
Sbjct: 1521 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 1580
Query: 360 L 360
L
Sbjct: 1581 L 1581
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 160/377 (42%), Gaps = 46/377 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I R G +E A E + + K S + L+ L +G VK Y
Sbjct: 1158 TYNVVITGLTRKGDLEEAA---ELVEGMRLSKKASSFT--YNPLITGLLARGCVKKV--Y 1210
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + ++ PTV YN +++G +S V+ A+ + EMR + P+V+TY +L+ GY
Sbjct: 1211 DLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGY 1270
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C+ + A+ L ++R+ G+ P + YN +IDG G EE + E + E G P
Sbjct: 1271 CKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEE--MGEQGCLP 1328
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS------------------------ 248
+ TYT L+KG L A + M+S+G P
Sbjct: 1329 NVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELR 1388
Query: 249 -----------PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
TYN K G ++DA L KM+ +G PD +TY L+ C+
Sbjct: 1389 EVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCER 1448
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A ++ M G T T++IH CR A F M+ G+ P+ +T+
Sbjct: 1449 GLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 1508
Query: 358 KRLNDEFKKRGMTALAQ 374
L + G T LA
Sbjct: 1509 NVLIHALCRMGRTQLAS 1525
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 145/363 (39%), Gaps = 69/363 (19%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER---- 130
+ LLDS K+GR + + + P YN+++ G R ++++A
Sbjct: 1122 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 1181
Query: 131 ------------------------------FWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
LEM E + P VVTY ++ G + V
Sbjct: 1182 MRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLV 1241
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A EMR G+ P+ I YN++++G +AG +E + PT++TY L
Sbjct: 1242 EAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIL 1301
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYN-----------------YFFRYFSK-- 261
+ GYC+ GDLE A + + M +G LP+ TY +F SK
Sbjct: 1302 IDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGL 1361
Query: 262 ----------------FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
G + A L ++ G + D +TY+IL+ LCK L A +
Sbjct: 1362 QPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKE 1421
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ +M G D T T LIH C EA F +MI GL+P +TF + +
Sbjct: 1422 LQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYC 1481
Query: 366 KRG 368
+RG
Sbjct: 1482 RRG 1484
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 143/311 (45%), Gaps = 9/311 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L ++G ++ A+E + ++ + T YN L+ G VK LE
Sbjct: 1159 YNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT---YNPLITGLLARGCVKKVYDLQLE 1215
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E + P VVTY ++ G + V+ A EMR G+ P+ I YN++++G +AG
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + PT++TY L+ GYC+ GDLE A + + M +G LP+ TY
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE---DKLDLAIQVSKEMK 311
+ + A + +M+ G PD Y+ + C E + A ++ + +
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGDIARAFELREVLM 1392
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
G D T +LIH LC+ +A M+ GL P +T+ L +RG+
Sbjct: 1393 LEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLR 1452
Query: 372 LAQKLCNVMSS 382
A+K+ N M S
Sbjct: 1453 EARKIFNNMIS 1463
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 36/255 (14%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVE 191
EM + + P++VTY TL++ + + R D+ L+KEM R G PN + YN VI GL
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168
Query: 192 AGRFEEVSGMMERFLVCEPG----------------------------------PTMVTY 217
G EE + ++E + + PT+VTY
Sbjct: 1169 KGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 1228
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+++ G ++G +E A M + G LP TYN + K G +++A+ L+ +
Sbjct: 1229 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 1288
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G P LTY+IL+ C+ L+ A + +EM +GC ++ T T+L+ +
Sbjct: 1289 AGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAM 1348
Query: 338 ASAEFEDMIRRGLVP 352
A F++M+ +GL P
Sbjct: 1349 AREFFDEMLSKGLQP 1363
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
YNIL++G ++ N+KDA+ ++M + P+ +TY L+ +C + A ++ M
Sbjct: 1402 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+G+ P+A+ + +I G G + L P +TY L+ C+ G
Sbjct: 1462 ISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRT 1521
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ AS M+ RG + + TY K G EDAM Y +M ++G PD LT+ L
Sbjct: 1522 QLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKAL 1581
Query: 291 LK 292
LK
Sbjct: 1582 LK 1583
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 136/335 (40%), Gaps = 44/335 (13%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD + T+ L+ Y +AG ++ A+ F + + + IL+D C+ G
Sbjct: 1257 LPDVI---TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLT----YNILIDGYCRLG 1309
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN--- 143
++ A K + +Q P V Y IL+ G +++ A F+ EM + + P+
Sbjct: 1310 DLEEAR--ILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367
Query: 144 --------------------------------VVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
VTY L+ G C+ + A L +M
Sbjct: 1368 YNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
G++P+ I Y +I E G E + + P+ VT+T ++ YC+ G+L
Sbjct: 1428 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLY 1487
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A + M+ G P+ TYN + G+ + A + + +M+E G ++ TY +L+
Sbjct: 1488 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 1547
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
CK + A++ EM G D T L+
Sbjct: 1548 DGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M++ S + IL+ LCK G +K A E + K + P Y L++
Sbjct: 1392 MLEGISSDTVTYNILIHGLCKTGNLKDAKEL--QMKMVSNGLQPDCITYTCLIHAHCERG 1449
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+++A + + M + + P+ VT+ ++ YCR + A ++M +EG+EPN I YN
Sbjct: 1450 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 1509
Query: 184 TVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+I L GR + S M+ER LV TYT L+ G CK G+ E A +
Sbjct: 1510 VLIHALCRMGRTQLASHHFHEMLERGLVA----NKYTYTLLIDGNCKVGNWEDAMRFYFE 1565
Query: 240 MISRGFLPSPTTYNYFFRYF 259
M G P T+ + F
Sbjct: 1566 MHQNGIHPDYLTHKALLKGF 1585
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 5/238 (2%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM V P+V ++ R D + +EM + GIEP+ + YNT++D ++ G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133
Query: 194 RFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK-MMISRGFLPSPT 250
R ++V+ +++ G P VTY ++ G + GDLE A+++++ M +S+ S
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKK--ASSF 1191
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN G V+ +L +M G P +TY+ ++ L + ++ A EM
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ G D+ T L++ C+ EA F D+ R GL P LT+ L D + + G
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+EM G+ P+ N V+ L +A R++++ + E L P++VTY +L+ + K
Sbjct: 1073 REMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKE 1132
Query: 228 GDLEGASKILKMMISRGF--LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G + + +LK M +RG LP+ TYN ++ G +E+A L M S
Sbjct: 1133 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA-SSF 1191
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ L+ L + + EM+ G + T +IH L + + A +F +M
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251
Query: 346 IRRGLVPHYLTFKRLNDEFKKRG 368
GL+P +T+ L + + K G
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAG 1274
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K A L + + PD + T+ LI + G++ A F N
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCI---TYTCLIHAHCERGLLREARKIF---N 1459
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N+ + A F +++ + C++G + +A +F RK L++ P YN+L++
Sbjct: 1460 NM-ISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF--RKMLEEGVEPNEITYNVLIHALC 1516
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + A + EM + + N TY L++G C++ + A+R EM + GI P+ +
Sbjct: 1517 RMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYL 1576
Query: 181 VYNTVIDGL 189
+ ++ G
Sbjct: 1577 THKALLKGF 1585
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 168/333 (50%), Gaps = 8/333 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ ILI YA + + A +E +M +N + ++ ++ C+ G V+ AS
Sbjct: 254 TYTILIEWYASSERIGEAEKVYE-----EMCERNVEMDVYVYTSMISWNCRAGNVRRASA 308
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + + + P + L++G ++ ++ AE EM+ + V NVV + T+++G
Sbjct: 309 LFDEM--ICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDG 366
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC+ +D A RL M ++G E + YN + GL + R+EE ++ + P
Sbjct: 367 YCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPN 426
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VT + ++ YC+ G+L + L+ + RG +P+ TYN +SK KV+ A L
Sbjct: 427 VVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKA 486
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M+E G PD TY L+ C DK+D A+++ EM +G ++ T T +I L +
Sbjct: 487 EMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEG 546
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ DEA +++M+R GL+P F+ L K
Sbjct: 547 RADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 2/308 (0%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
D G I++D LC++G V A E ++ + PTV YN LLN K+ +
Sbjct: 179 DIGVQSLTIVVDVLCRRGEVGRAKELMNEMAA--RGVVPTVFTYNTLLNACVVRKDREGV 236
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ M +E V ++VTY L+E Y R+ A ++ +EM + +E + VY ++I
Sbjct: 237 DEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISW 296
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
AG S + + + P T+ +L+ G CKAG +E A +L+ M +G +
Sbjct: 297 NCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
+N + K G +++A L M G+ D TY+IL LCK + + A +V
Sbjct: 357 VVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLN 416
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M +G ++ T I + C+ E ++ +RG+VP+ +T+ L D + K
Sbjct: 417 VMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNE 476
Query: 369 MTALAQKL 376
A L
Sbjct: 477 KVKQAHXL 484
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 7/255 (2%)
Query: 130 RFWLEMRKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
RF+ M + V V + +V+ CR V RA L+ EM G+ P YNT+++
Sbjct: 167 RFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNA 226
Query: 189 LV---EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
V + +E+ G+MER V ++VTYT L++ Y + + A K+ + M R
Sbjct: 227 CVVRKDREGVDEILGLMEREGVV---ASLVTYTILIEWYASSERIGEAEKVYEEMCERNV 283
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
Y + + G V A L+ +MI G P+ T+ L+ +CK +++ A
Sbjct: 284 EMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEI 343
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ +EM+C+G D+++ ++ C+ DEA + M R+G T+ L
Sbjct: 344 LLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLC 403
Query: 366 KRGMTALAQKLCNVM 380
K A+++ NVM
Sbjct: 404 KLHRYEEAKRVLNVM 418
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 5/242 (2%)
Query: 144 VVTYGTLVEGYC----RLRRVDRAIRLVKEMRKEG-IEPNAIVYNTVIDGLVEAGRFEEV 198
V+ G +VEG + +V+ +R + M + G ++ V+D L G
Sbjct: 142 VMEKGLVVEGRSCFXKKCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRA 201
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+M PT+ TY +L+ D EG +IL +M G + S TY +
Sbjct: 202 KELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEW 261
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
++ ++ +A +Y +M E D Y ++ C+ + A + EM CRG +
Sbjct: 262 YASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPN 321
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
T LI +C+ + + A E+M +G+ + + F + D + KRGM A +L +
Sbjct: 322 TXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQD 381
Query: 379 VM 380
+M
Sbjct: 382 IM 383
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 44/362 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LIR+ A+ F +DM D A L+ +++ LCK ++ A+ Y
Sbjct: 16 TFGSLIRKLCELNFTNKALQIFH--QMIDMKVKPD--AFLYTVVIGHLCKINKLDLAASY 71
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + P Y +L++ F++ + + + EM + +P +VTY T+V GY
Sbjct: 72 FEQM--VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGY 129
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R+D+A+ L++ ++ G P+ +Y+T+IDGL + R EE + E + +
Sbjct: 130 CKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDV 187
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV--------- 265
+ YTS + G CKAG L+ A + MI G P P +YN K +V
Sbjct: 188 IVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQ 247
Query: 266 --------------------------EDAMNLYRKMIESG-YTPDRLTYHILLKILCKED 298
E+A + +M+E+G P +TY ++ LCK D
Sbjct: 248 AMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKAD 307
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+LD A V ++M+ GC D+ T T +I C++ + DEA F+ M RG + +
Sbjct: 308 RLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYN 367
Query: 359 RL 360
L
Sbjct: 368 IL 369
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 149/294 (50%), Gaps = 17/294 (5%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
GH P+ V T+ ++ Y +AG ++ A+ L SG SL+ L+D LC
Sbjct: 114 GHS-PELV---TYATVVNGYCKAGRIDQAL---SLMRRLKGTGRSPSG-SLYSTLIDGLC 165
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K R + A E F E+ V VY ++G ++ + +A+ ++M + P+
Sbjct: 166 KHDRHEEARELF----EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 221
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V+Y ++ C+ RV A L+ + + P V ++DGL ++ R EE ++E
Sbjct: 222 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 281
Query: 204 RFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
R L E G P++VTY++++ G CKA L+ A +L+ M G +P TY F
Sbjct: 282 RML--EAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFC 339
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G++++A L+++M E G D + Y+IL++ C+ K+D AI + +EM RG
Sbjct: 340 KVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM+ +TP +VT+G+L+ C L ++A+++ +M ++P+A +Y VI L +
Sbjct: 4 EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + E+ + P VTYT LV KA E +I + M+S+G P TY
Sbjct: 64 KLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYA 123
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ K G+++ A++L R++ +G +P Y L+ LCK D+ + A ++ EM
Sbjct: 124 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMA-A 181
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D+ T I LC+ K DEA A MI G P +++ + K + A
Sbjct: 182 GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEA 241
Query: 374 QKLCN------VMSSVPRSMELLDSRCK 395
++L + M VP L+D CK
Sbjct: 242 KELMDQAMERKCMPGVPVCTVLVDGLCK 269
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 132/294 (44%), Gaps = 34/294 (11%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PT+ + L+ A + + +M V P+ Y ++ C++ ++D A
Sbjct: 12 PTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 71
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++M + G P+ + Y ++ L +A ++E+ + E L P +VTY ++V GYCK
Sbjct: 72 FEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 131
Query: 227 AGDLEGASKILKMMISRGFLPSPT---------------------------------TYN 253
AG ++ A +++ + G PS + Y
Sbjct: 132 AGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIVYT 191
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K GK+++A ++ KMIE+G PD ++Y++++ LCK++++ A ++ + R
Sbjct: 192 SFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMER 251
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRLNDEFKK 366
C + T+L+ LC+ + +EA E M+ G P +T+ + D K
Sbjct: 252 KCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCK 305
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L M + G P+ T+ R + A+ ++ +MI+ PD Y +++ LC
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K +KLDLA ++M GC D T T+L+H L + K+++ FE+M+ +G P +
Sbjct: 61 KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRS------MELLDSRCK 395
T+ + + + K G A L + RS L+D CK
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCK 166
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 162/336 (48%), Gaps = 14/336 (4%)
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS 104
R G V++ + F NLD+ S I+LD LCK+G V+ RK +D+
Sbjct: 202 RGGQVDSCLRFFRRMVNLDVEVTVYS----LTIVLDGLCKRGDVEMG------RKLMDEV 251
Query: 105 WAPTVR----VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
A V+ YN + G+F+ ++ M KE V NVVTY L+ G+ + ++
Sbjct: 252 AAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKI 311
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A RL +EMR++GIE + VY ++I +G + + + P+ TY +L
Sbjct: 312 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGAL 371
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CKAG +E A ++ M +G +P +N + + G V++A+ L M + G
Sbjct: 372 IHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL 431
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
D Y+ + LCK ++ D A + M RG + + T LI + C+ F EA
Sbjct: 432 ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKR 491
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F +M +G VP+ +T+ L D + KRG A KL
Sbjct: 492 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 527
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 166/328 (50%), Gaps = 10/328 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI ++ G +E A FE K ++ ++ ++ C+ G VK A
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMRE----KGIEADVYVYTSIISCNCRSGNVKRALVL 352
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + D+ P+ Y L++G ++ ++ A+ EM+ + + N V + TL++GY
Sbjct: 353 FDEMT--DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C VD A+RL M K+G+E + YN++ GL + R +E G++ F + E G P
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL--FSMVERGVSP 468
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+++T+L+ YCK G+ A ++ + M +G +P+ TYN +SK G +++A L
Sbjct: 469 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 528
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++ G PD T L+ C + K+D+A+++ EM RG ++ T T +I L +
Sbjct: 529 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 588
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +EA +++M GL P + L
Sbjct: 589 GRSEEAFKLYDEMKETGLTPDDTVYSSL 616
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 159/308 (51%), Gaps = 6/308 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ G+++ A F + +E + V VY +++ RS NVK A + E
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMRE--KGIEADVYVYTSIISCNCRSGNVKRALVLFDE 355
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+ TYG L+ G C+ +++ A LV EM+ +GI+ N +++NT+IDG E+G
Sbjct: 356 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 415
Query: 195 FEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+E + + ++ + G + Y S+ G CK + A +L M+ RG P+ ++
Sbjct: 416 VDE--ALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 473
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K G +A ++R+M E G P+ +TY++L+ K + A ++ E++
Sbjct: 474 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 533
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
RG D+ T T LIH C K D A F++M +RGLVP+ +T+ + K G +
Sbjct: 534 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 593
Query: 373 AQKLCNVM 380
A KL + M
Sbjct: 594 AFKLYDEM 601
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 10/265 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ LI +AG +EAA + N K D +F L+D C+ G V A
Sbjct: 364 SAHTYGALIHGVCKAGQMEAA----QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEA 419
Query: 92 S--EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+ ++K L+ V YN + +G + +A+ M + V+PN +++ T
Sbjct: 420 LRLQVVMEKKGLESD----VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++ YC+ A R+ +EM ++G PN I YN +IDG + G +E + +
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + T TSL+ G C G ++ A K+ M RG +P+ TY SK G+ E+A
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595
Query: 270 NLYRKMIESGYTPDRLTYHILLKIL 294
LY +M E+G TPD Y L+ L
Sbjct: 596 KLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R +VD +R + M +E V+DGL + G E +M+ +V
Sbjct: 202 RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVV 261
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY + ++GY K DL G ++IL +M G + TY FS GK+E+A L+ +M
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
E G D Y ++ C+ + A+ + EM +G T LIH +C+ +
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 381
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ A +M +G+ + + F L D + + GM A +L VM
Sbjct: 382 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 163 AIRLVKEMRKEGI---EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A+ + M K+G E + +VY + L G+ + R + + T+ + T
Sbjct: 174 ALEAFEHMEKKGFHIDERSCLVY---LLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR-YFSK--FGKVEDAMNLYRKMI 276
++ G CK GD+E K++ + ++G + TYN F YF + G V + + L K
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK-- 288
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G + +TY +L+ K++ A ++ +EM+ +G + D+ T +I CR
Sbjct: 289 -EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F++M +GL+P T+ L K G AQ L N M
Sbjct: 348 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 391
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 37/153 (24%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF--- 131
F L+D CK+G A F + +E + P + YN+L++G+ + N+K+A +
Sbjct: 473 FTTLIDIYCKEGNFVEAKRVFREMEE--KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530
Query: 132 --------------------------------WLEMRKENVTPNVVTYGTLVEGYCRLRR 159
+ EM + + PNVVTY ++ G + R
Sbjct: 531 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+ A +L EM++ G+ P+ VY++++ L A
Sbjct: 591 SEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 175/388 (45%), Gaps = 14/388 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ + A+ ++F+SAW L+ P S T IL RYA G A+ TF
Sbjct: 111 VDIAARMRDFNSAWALVGRMRSLRLGP---SPKTLAILAERYASNGKPHRAVRTFLSMAE 167
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ ++ S F LLD LCK RV+ A K L + P YNIL NG+
Sbjct: 168 HGIRQDLHS----FNTLLDILCKSKRVETAHSLL---KTLTSRFRPDTVTYNILANGYCL 220
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
K A R EM + + P +VTY T+++GY R ++ A EM+K E + +
Sbjct: 221 IKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVT 280
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y TVI G AG ++ + + P + TY +L++ CK +E A + + M
Sbjct: 281 YTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMA 340
Query: 242 SRGF-LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G +P+ TYN R G +E A+ +M E G TY+++++ C ++
Sbjct: 341 REGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEV 400
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGLVPHYLTF 357
+ A++V +M C +LDT +LI + K ++ A DM+ RG +P TF
Sbjct: 401 EKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTF 460
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPR 385
R+ + G A+++ + S R
Sbjct: 461 NRVLNGLVITGNQDFAKEILRMQSRCGR 488
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 146/285 (51%), Gaps = 4/285 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ +++ C+ G + S+ R E+ P V YN LLNG + + + DAE
Sbjct: 18 IYTMVIGGFCRAGLM---SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 74
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EMR+ V P++ T+ TL+ GYC ++D+A++L M + + P+ + YNT+IDG+
Sbjct: 75 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 134
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G ++ + + + E P VTY+ L+ +C+ G +E A L MI++G LP+ TY
Sbjct: 135 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 194
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + + + G V +KM+ + +PD +TY+ L+ KEDK+ A ++ M+
Sbjct: 195 NSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK 254
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D+ T MLI+ EA FE M +G+ P T+
Sbjct: 255 EKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 299
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 156/326 (47%), Gaps = 9/326 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V + ++I + RAG++ A+ + + + + LL+ LCK+
Sbjct: 13 VPDGV---IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD----VVTYNTLLNGLCKER 65
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R+ A ++ +E + P + + L++G+ + A + + M + + P++VT
Sbjct: 66 RLLDAEGLLNEMRE--RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL++G CR +D+A L +M I PN + Y+ +ID E G+ E+ G ++ +
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++TY S++KGYC++G++ K L+ M+ P TYN + K K+
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
DA L M + PD +TY++L+ + A + ++M +G + D T +I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVP 352
+ EA ++M++RG P
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAP 329
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 4/276 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P +Y +++ G+ R+ + DA R EM P+VVTY TL+ G C+ RR+ A
Sbjct: 13 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 72
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ EMR+ G+ P+ + T+I G G+ ++ + + L P +VTY +L+ G C
Sbjct: 73 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ GDL+ A+ + M SR P+ TY+ + G+VEDA +MI G P+ +
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ ++K C+ + + ++M DL T LIH + K +A M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALA----QKLC 377
+ + P +T+ L + F G A +K+C
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 288
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 12/252 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y G ++ A+ F+ N + + L+D +C+QG + A++
Sbjct: 88 TFTTLIHGYCIEGKLDKALQLFDTMLN----QRLRPDIVTYNTLIDGMCRQGDLDKANDL 143
Query: 95 F---HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ H R+ P Y+IL++ V+DA F EM + + PN++TY +++
Sbjct: 144 WDDMHSREIF-----PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 198
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GYCR V + + +++M + P+ I YNT+I G ++ + + ++ +
Sbjct: 199 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 258
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VTY L+ G+ G+++ A I + M ++G P TY G ++A L
Sbjct: 259 PDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 318
Query: 272 YRKMIESGYTPD 283
+ +M++ G+ PD
Sbjct: 319 HDEMLQRGFAPD 330
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EMR + P+ V Y ++ G+CR + A+R+ EM G P+ + YNT+++GL +
Sbjct: 6 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + G++ P + T+T+L+ GYC G L+ A ++ M+++ P TYN
Sbjct: 66 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ G ++ A +L+ M P+ +TY IL+ C++ +++ A EM +
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T +I CR + + M+ + P +T+ L + K A
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245
Query: 374 QKLCNVM 380
KL N+M
Sbjct: 246 FKLLNMM 252
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%)
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++EMR G+ P+ ++Y VI G AG + + + + C P +VTY +L+ G CK
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
L A +L M RG P T+ + GK++ A+ L+ M+ PD +T
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ +C++ LD A + +M R + T ++LI C + ++A ++MI
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+G++P+ +T+ + + + G + QK M
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 217
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L+ M G +P Y F + G + DA+ + +M+ G PD +TY+ LL LCK
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E +L A + EM+ RG DL T T LIH C K D+A F+ M+ + L P +T
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS---VPRSME---LLDSRCK 395
+ L D ++G A L + M S P + L+DS C+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 168
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
M R+M G PD + Y +++ C+ + A++V EM GC D+ T L++
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LC+ + +A +M RG+ P TF L + G A +L + M
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 112
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 158/360 (43%), Gaps = 36/360 (10%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L++ Y G + +A+ + +V N + +L+D CK G ++ A E++ +
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPN----KVTYSVLIDGCCKNGNIEKAFEFYSEM 206
Query: 99 KELD------------------QSWA--------------PTVRVYNILLNGWFRSKNVK 126
K QSW V +N LL+ + +
Sbjct: 207 KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMN 266
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A W E+ + ++PNVV+Y ++ G+CR ++ A ++ KEM G PNA+ + ++
Sbjct: 267 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILM 326
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DG + G E + R PT T ++KG CKAG + +S+GF+
Sbjct: 327 DGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFV 386
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ YN F K G + A N+YR+M E G TP +TY L+ CK + +DLA+++
Sbjct: 387 PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 446
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+MK +G +D+ LI C+ A ++ GL P+ + + FK
Sbjct: 447 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 506
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 160/351 (45%), Gaps = 57/351 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF IL+ Y + G +E A F + +++ + I++ LCK GR +
Sbjct: 321 TFTILMDGYFKKGDIENAFSIFHRMKDANILPT----DTTLGIIIKGLCKAGRSFEGRDL 376
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F+K + Q + PT YN +++G+ + N+ A + EM + +TP+ VTY +L++G+
Sbjct: 377 FNKF--VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 434
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +D A++L+ +M+++G++ + Y T+ID
Sbjct: 435 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID--------------------------- 467
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
G+CK D++ A ++L + G P+ YN F VE+A++LY+K
Sbjct: 468 --------GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 519
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G D TY L+ L K +L A + EM +G D T+LI+ LC +
Sbjct: 520 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 579
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK----------------RLNDEFKKRGM 369
F+ A EDM + ++P L + RL+DE RG+
Sbjct: 580 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 161/394 (40%), Gaps = 73/394 (18%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRK----ELDQ--------------------------- 103
++L + K+G + A ++F + K ELDQ
Sbjct: 43 LHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMR 102
Query: 104 --SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
W P + ++ + NV +A R +M + N+ +L++GYC +
Sbjct: 103 AAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR 162
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE-------------------VSGMM 202
A+ LV E+ + G+ PN + Y+ +IDG + G E+ ++ ++
Sbjct: 163 SALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 222
Query: 203 ERFLVC--------------EPG-PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
E +L C E G + T+ +L+ CK G + A + +I++G P
Sbjct: 223 EGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 282
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ +YN + + A +Y++M+++G+TP+ +T+ IL+ K+ ++ A +
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
MK T ++I LC+ + E F + +G VP + + + D F K
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402
Query: 368 GMTALA----QKLCNV--MSSVPRSMELLDSRCK 395
G LA +++C V S L+D CK
Sbjct: 403 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 436
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 126/333 (37%), Gaps = 71/333 (21%)
Query: 106 APTVRVYNILLNGWFRSK-----------------------------------NVKDAER 130
P+++ NILL R N+ +AE+
Sbjct: 2 TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+L+ + V + Y V C A+ L++EMR G P + +VI V
Sbjct: 62 HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G E + + + C + TSL+KGYC G+L A ++ + G +P+
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKM----------------------------------- 275
TY+ K G +E A Y +M
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ESG + T++ LL LCKE K++ A + E+ +G ++ + +I CR
Sbjct: 242 LESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ A +++M+ G P+ +TF L D + K+G
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 333
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
PS N + +A L+ KM+ G T D T H++L+ KE + A Q
Sbjct: 3 PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ K RG ++D + ++ +HLLC A + +M G +P TF + K
Sbjct: 63 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122
Query: 367 RGMTALAQKLCNVMSSVPRSMEL 389
G A A +L + M + +SM L
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNL 145
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 8/348 (2%)
Query: 28 PDFVSKDTFV--ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
PD + D+ V I++ AG A+ A M K F +++ L+D C
Sbjct: 172 PDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDA----MGKGFVPNVAVYNALIDGYCST 227
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G ++ A + F + + P VR Y L+ G+ +S V+ A + M + + PNVV
Sbjct: 228 GDLELAIDIFKGMQS--KGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVV 285
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL++G C ++ A RL+ M G+ PN +ID L + GR EE +
Sbjct: 286 TYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSL 345
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ V YTS++ CK+G +GA +++ +I+ GF+P Y+ + K+
Sbjct: 346 VQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKL 405
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+A++L MIESG + + + IL+ +E + D +S M G D+ T T+
Sbjct: 406 LEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVF 465
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
I C+ + ++A + MI G+ P+ T+ L + G+ + A
Sbjct: 466 IRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQA 513
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 6/323 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L++ AGMV A+ F + ++ I++ LC GR A
Sbjct: 146 TYAALLQGLCGAGMVREAMAVFAGM----WPDGCAPDSHVYSIMVHGLCGAGRAGEAVAL 201
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P V VYN L++G+ + +++ A + M+ + PNV TY L+ G+
Sbjct: 202 L--TDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGF 259
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +V+RA+ L M + G+ PN + Y T+I G G E ++ C P
Sbjct: 260 CKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNE 319
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T L+ CK G +E A + L ++ +G + Y K GK + A NL +K
Sbjct: 320 WTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQK 379
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+I G+ PD Y L+ LC+E+KL AI + +M G + T+LI R ++
Sbjct: 380 IITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFR 439
Query: 335 FDEASAEFEDMIRRGLVPHYLTF 357
D + M G+ P +T+
Sbjct: 440 SDSPKMISDRMAAAGVKPDVVTY 462
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 148/337 (43%), Gaps = 9/337 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD + +FV+ Y R G+ A F + + LL LC G
Sbjct: 106 APDSHAYTSFVL---GYCRTGLFAHACRLFLLMPQRGCART----PFTYAALLQGLCGAG 158
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V+ A F AP VY+I+++G + +A + + PNV
Sbjct: 159 MVREAMAVFAGM--WPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L++GYC ++ AI + K M+ +G PN Y +I G ++G+ E + R +
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTYT+L++G C G LE A ++L M + G P+ T K G++E
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A +++ G +++ Y ++ LCK K D A + +++ G D + LI
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
LCR K EA + DMI G+ + + F L D+
Sbjct: 397 DGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDK 433
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 144/350 (41%), Gaps = 14/350 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y AG + AA ++ L DS A +L C+ G A
Sbjct: 76 TYTTLINAYCHAGDLPAA--KRHLSSLLRAGLAPDSHAYTSFVL--GYCRTGLFAHACRL 131
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + A T Y LL G + V++A + M + P+ Y +V G
Sbjct: 132 FLLMPQ--RGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGL 189
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEP 210
C R A+ L+ + +G PN VYN +IDG G E GM + +
Sbjct: 190 CGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL--- 246
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + TYT L+ G+CK+G +E A + MI G P+ TY + G +E A
Sbjct: 247 -PNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFR 305
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L M G P+ T +L+ LCK +++ A Q + +G ++ T +I LC
Sbjct: 306 LLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALC 365
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ KFD A + +I G VP + L D + A L N M
Sbjct: 366 KSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 117/227 (51%), Gaps = 10/227 (4%)
Query: 77 ILLDSLCKQGRVKAASEYF----HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+L+D+LCK GR++ A ++ K +++Q +Y +++ +S A
Sbjct: 324 VLIDALCKHGRIEEAQQFLGSLVQKGIKVNQV------IYTSMIDALCKSGKFDGAHNLM 377
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
++ E P+ Y +L++G CR ++ AI L+ +M + G++ NA+ + +ID +
Sbjct: 378 QKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLRE 437
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R + + +R P +VTYT ++ YC+ G +E A ++ MI G P+ TTY
Sbjct: 438 FRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTY 497
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
N + ++ G V A + + MI++G P+ +Y +LL +L K++
Sbjct: 498 NTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNS 544
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 124/299 (41%), Gaps = 18/299 (6%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +R N LL R + D E M N+ TY TL+ YC + A R
Sbjct: 41 PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP----GPTMVTYTSLVK 222
+ + + G+ P++ Y + + G G F R + P T TY +L++
Sbjct: 97 LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHAC----RLFLLMPQRGCARTPFTYAALLQ 152
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G C AG + A + M G P Y+ G+ +A+ L + G+ P
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVP 212
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ Y+ L+ C L+LAI + K M+ +GC ++ T T LI C+ K + A +
Sbjct: 213 NVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLY 272
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRS------MELLDSRCK 395
MI GL P+ +T+ L G A +L + M + + + L+D+ CK
Sbjct: 273 SRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 155/397 (39%), Gaps = 57/397 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T ++LI + G +E A +F +L + K ++ ++D+LCK G+ A
Sbjct: 321 TCLVLIDALCKHGRIEEAQ---QFLGSL-VQKGIKVNQVIYTSMIDALCKSGKFDGAHNL 376
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+K + + + P +Y+ L++G R + +A +M + V N V + L++ +
Sbjct: 377 M--QKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKH 434
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R R D + M G++P+ + Y I + GR E+ MM + + P +
Sbjct: 435 LREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNL 494
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY---------------------- 252
TY +L+KGY G + A LK MI G P+ +Y
Sbjct: 495 TTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSIS 554
Query: 253 -----------------------------NYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ F R SK ++E+A + M + TP
Sbjct: 555 LWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPS 614
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
Y +++ + L A++ M R L++ +I LC F A + F
Sbjct: 615 EDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFG 674
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
D++ + + +K L D ++G TA +L + M
Sbjct: 675 DILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFM 711
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 27/320 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K+ +FD A L+ I VPD + LI R + AI
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPD---AHMYSSLIDGLCRENKLLEAISLLN--- 413
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+++ + A F IL+D ++ R + S + P V Y + + +
Sbjct: 414 --DMIESGVQANAVPFTILIDKHLREFR--SDSPKMISDRMAAAGVKPDVVTYTVFIRSY 469
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++DAE ++M V PN+ TY TL++GY L V +A +K M G +PN
Sbjct: 470 CQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPND 529
Query: 180 IVYNTVIDGLVEAGRFEEVSG----------------MMERFLVCEPGPTMVTYTSLVKG 223
Y ++ L++ + ++ ++E + + Y ++
Sbjct: 530 ESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRC 589
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
K LE A L M S PS Y + +++A+ M++ Y P
Sbjct: 590 LSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPR 649
Query: 284 RLTYHILLKILCKEDKLDLA 303
+Y ++ LC+E A
Sbjct: 650 LESYRFIICALCEEGSFHTA 669
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 14/231 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLD------------SL 82
T+ LI+ YA G+V A + + + N +S L +LL SL
Sbjct: 496 TYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISL 555
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
K +K E + +L S A VY+ + + +++A+ F + M+ N+TP
Sbjct: 556 WKIVDMKVLEELLEEVIKLQCSSAS--YVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTP 613
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ Y ++E R++ + A+R + M K P Y +I L E G F +
Sbjct: 614 SEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIF 673
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
L E + + L+ G + G+ S++L M + P Y+
Sbjct: 674 GDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 158/360 (43%), Gaps = 36/360 (10%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L++ Y G + +A+ + +V N + +L+D CK G ++ A E++ +
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPN----KVTYSVLIDGCCKNGNIEKAFEFYSEM 324
Query: 99 KELD------------------QSWA--------------PTVRVYNILLNGWFRSKNVK 126
K QSW V +N LL+ + +
Sbjct: 325 KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMN 384
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A W E+ + ++PNVV+Y ++ G+CR ++ A ++ KEM G PNA+ + ++
Sbjct: 385 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILM 444
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DG + G E + R PT T ++KG CKAG + +S+GF+
Sbjct: 445 DGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFV 504
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ YN F K G + A N+YR+M E G TP +TY L+ CK + +DLA+++
Sbjct: 505 PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 564
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+MK +G +D+ LI C+ A ++ GL P+ + + FK
Sbjct: 565 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 624
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 160/351 (45%), Gaps = 57/351 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF IL+ Y + G +E A F + +++ + I++ LCK GR +
Sbjct: 439 TFTILMDGYFKKGDIENAFSIFHRMKDANILPT----DTTLGIIIKGLCKAGRSFEGRDL 494
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F+K + Q + PT YN +++G+ + N+ A + EM + +TP+ VTY +L++G+
Sbjct: 495 FNKF--VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 552
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +D A++L+ +M+++G++ + Y T+ID
Sbjct: 553 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID--------------------------- 585
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
G+CK D++ A ++L + G P+ YN F VE+A++LY+K
Sbjct: 586 --------GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 637
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G D TY L+ L K +L A + EM +G D T+LI+ LC +
Sbjct: 638 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 697
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK----------------RLNDEFKKRGM 369
F+ A EDM + ++P L + RL+DE RG+
Sbjct: 698 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 748
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 143/331 (43%), Gaps = 40/331 (12%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
W P + ++ + NV +A R +M + N+ +L++GYC + A+
Sbjct: 224 WIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSAL 283
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE-------------------VSGMMERF 205
LV E+ + G+ PN + Y+ +IDG + G E+ ++ ++E +
Sbjct: 284 VLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGY 343
Query: 206 LVC--------------EPG-PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
L C E G + T+ +L+ CK G + A + +I++G P+
Sbjct: 344 LKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVV 403
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+YN + + A +Y++M+++G+TP+ +T+ IL+ K+ ++ A + M
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
K T ++I LC+ + E F + +G VP + + + D F K G
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 523
Query: 371 ALA----QKLCNV--MSSVPRSMELLDSRCK 395
LA +++C V S L+D CK
Sbjct: 524 NLASNVYREMCEVGITPSTVTYTSLIDGFCK 554
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 38/295 (12%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
++YN L+ + N+ +AE+ +L+ + V + Y V C A+ L++
Sbjct: 160 TKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLR 217
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
EMR G P + +VI V+ G E + + + C + TSL+KGYC G
Sbjct: 218 EMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQG 277
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM------------- 275
+L A ++ + G +P+ TY+ K G +E A Y +M
Sbjct: 278 NLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 337
Query: 276 ----------------------IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ESG + T++ LL LCKE K++ A + E+ +
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAK 396
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
G ++ + +I CR + A +++M+ G P+ +TF L D + K+G
Sbjct: 397 GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 451
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 165/358 (46%), Gaps = 36/358 (10%)
Query: 39 LIRRYARAGMVEAAIWTFEF-ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
L+R+ G + FEF A + D + F S +F+ L+ S C R A E F+
Sbjct: 119 LLRQALGGGTTNSIREIFEFLAASRDRL-GFKSSI-VFDYLIKSCCDMNRADEAFECFYT 176
Query: 98 RKE----------------------LDQSWA-----------PTVRVYNILLNGWFRSKN 124
KE + +W +V +NI++N +
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+K A+ F M V PN+VTY T+V GYC RV+ A ++ M+++ IEP++ Y +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G+ + GR EE S + E + P+ V Y +L+ G+C G+L+ AS M+ +G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ +TYN + ++A + +++ E G +PD +TY+IL+ C+ A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ EM G T T L+H+L + + EA F+ + G++P + F L D
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 158/324 (48%), Gaps = 8/324 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI + G +E A FE +MV K A ++ L+D C +G + AS
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFE-----EMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
Y K + L + +PT+ YN L++ F + +AE E++++ ++P+ +TY L+ G
Sbjct: 348 Y--KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YCR +A L EM GI+P Y +++ L + R +E + ++ P
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ + +L+ G+C +++GA ++LK M P T+N + + GKVE+A L+
Sbjct: 466 AIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G PD ++++ L+ + + A +V EM G + + T L+ LC+
Sbjct: 526 EMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQ 585
Query: 334 KFDEASAEFEDMIRRGLVPHYLTF 357
+ D A ++M+ +G+ P T+
Sbjct: 586 EGDLAEELLKEMVSKGMTPDDTTY 609
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 157/334 (47%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF I+I + G ++ A +F +++ + ++ C GRV+AA
Sbjct: 223 TFNIMINVLCKEGKLKKAK---DFVGHME-TSGVKPNIVTYNTIVHGYCSSGRVEAADAI 278
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K Q P Y L++G + +++A + + EM ++ + P+ V Y TL++G+
Sbjct: 279 LTTMKR--QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C +D A EM K+GI P YN++I L R +E M++ P
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY L+ GYC+ + + A + M++ G P+ TY SK ++++A +L++K
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G PD + ++ L+ C + A ++ K+M D T ++ CR K
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA F++M RRG+ P +++F L + +RG
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV----PDFVSKDTFVILIRRYARAGMVEAAIWTF 56
MI VL K + A D +G E P+ V+ +T ++ Y +G VEAA
Sbjct: 227 MINVLCKEGKLKKAK----DFVGHMETSGVKPNIVTYNT---IVHGYCSSGRVEAADAIL 279
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ + + + L+ +CKQGR++ AS+ F + + + P+ +YN L+
Sbjct: 280 TTMKR----QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM--VQKGLRPSAVIYNTLI 333
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ N+ A + EM K+ ++P + TY +L+ +R D A ++KE++++GI
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+AI YN +I+G ++ + + L PT TYTSL+ K ++ A +
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K + S G LP +N V+ A L + M PD +T++ +++ C+
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E K++ A ++ EMK RG D + LI R +A +M+ G P LT
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L K LA++L M S
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVS 599
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 13/254 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--F 58
+I L + D A C++ + PD + T+ ILI Y R + A +
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAI---TYNILINGYCRCANAKKAFLLHDEML 423
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A+ + K + LL L K+ R+K A + F +K + P ++N L++G
Sbjct: 424 ASGIKPTKK------TYTSLLHVLSKKNRMKEADDLF--KKITSEGVLPDAIMFNALIDG 475
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ NVK A +M + V P+ VT+ T+++G+CR +V+ A L EM++ GI+P+
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I +NT+I G G ++ + L PT++TY +LV+G CK + + A ++LK
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 239 MMISRGFLPSPTTY 252
M+S+G P TTY
Sbjct: 596 EMVSKGMTPDDTTY 609
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 172/387 (44%), Gaps = 43/387 (11%)
Query: 31 VSKDTFVI--LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
+S DTF +I + R +++A+ F N + + + L++ LC GRV
Sbjct: 416 MSPDTFTYTSMILGHCRKHDLDSALQVF----NQMAKEGCEPNTVTYSTLINGLCDSGRV 471
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A + R+ + PT + +DA R +++M+ + PNV TY
Sbjct: 472 NEAFDLI--REMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 529
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF------------- 195
L+ G C + AI L M ++G+ PN + YN +I+ LVE R
Sbjct: 530 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 589
Query: 196 ----------EEVSG------------MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
E + G +M L +VTY +++KGYC +G+ A
Sbjct: 590 GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+IL +M G P +Y F K K+E A L+ +M++ G P+ +TY L+
Sbjct: 650 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
CK++KLD A + + MK GC ++ T +LIH L + F A + MI G+ P+
Sbjct: 710 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVM 380
+T+ + D K G T+LA ++ N M
Sbjct: 770 VVTYTAMIDGLCKNGSTSLALEMFNKM 796
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 9/358 (2%)
Query: 11 FDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS 70
++ AW L +D P+ T+ LI +G+++ AI F + + N +
Sbjct: 506 YEDAWRLFVDMKNKGCEPNVY---TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+L IL+++ R+K A + + YN ++ G+ + K A
Sbjct: 563 YNALINILVENR----RIKYAFVVLNLMGR--NGLFTNIVTYNEMIKGYCILGDPKKAML 616
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
M + + N+VTY T+++GYC A+R++ MR G +P+ Y +I G
Sbjct: 617 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 676
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ + E G+ + P VTYT+L+ GYCK L+ A+ +L+ M G P+
Sbjct: 677 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 736
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN +K A L + MIE G P+ +TY ++ LCK LA+++ +M
Sbjct: 737 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+GC +L T + LI L + K +EA F ++ R GL+P +T+ ++ + + G
Sbjct: 797 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 159/333 (47%), Gaps = 7/333 (2%)
Query: 50 EAAIWTFEFANNLDMVKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAP 107
EA T F LDM+ LF LL L + G A + +H+ L + P
Sbjct: 329 EAMARTMSF---LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM--LSEGVQP 383
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ +YN ++N + NV DAE ++ + ++P+ TY +++ G+CR +D A+++
Sbjct: 384 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 443
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+M KEG EPN + Y+T+I+GL ++GR E ++ ++ PT T T + C
Sbjct: 444 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 503
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G E A ++ M ++G P+ TY G ++ A+ L+ +M G P+ +TY
Sbjct: 504 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 563
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+ L+ IL + ++ A V M G ++ T +I C + +A +M++
Sbjct: 564 NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG + +T+ + + G T A ++ ++M
Sbjct: 624 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 656
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 1/284 (0%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + + + YN ++ G+ S N A R MR P+ +Y L+ G+C++ ++
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A L EM +G+ PN + Y +IDG + + + + ++E P + TY L
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G K + GA ++ K+MI G P+ TY K G A+ ++ KMIE G
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ LTY L++ L +E K++ A + E++ G D T +I K + A
Sbjct: 802 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 861
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
MI+ G P T+ L K + A Q+L + VP
Sbjct: 862 FLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA-DQRLAALPDVVP 904
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 61/367 (16%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK ++ A+ K P V+ YN+L++G + N AE
Sbjct: 703 YTALIDGYCKDEKLDTATSLLEHMKR--SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 760
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +E + PNVVTY +++G C+ A+ + +M ++G PN + Y+++I L + G+
Sbjct: 761 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 820
Query: 195 FEE----------------------------VSGMME-------RFLVCEPGPTMVTYTS 219
EE +SG +E R + PT+ TY
Sbjct: 821 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 880
Query: 220 LVKGY--------------------CKAG----DLEGASKILKMMISRGFLPSPTTYNYF 255
L+KG C G D + S + + S N
Sbjct: 881 LIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNAL 940
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
S G+ +A L MI G PD+ Y+ LL L + +DLA+ V K M +GC
Sbjct: 941 VSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGC 1000
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ L+ LI LC++++ EA FE+M+ R P + L D + G L +
Sbjct: 1001 EVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCME 1060
Query: 376 LCNVMSS 382
++M +
Sbjct: 1061 FLHIMET 1067
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y L+ RL + M EG++PN ++YN VI+ L + G + +M++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E P TYTS++ G+C+ DL+
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLD---------------------------------- 437
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A+ ++ +M + G P+ +TY L+ LC +++ A + +EM G T T
Sbjct: 438 -SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 496
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
I LC M +++A F DM +G P+ T+ L G+ +A L + MS
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL+ C+ RV A F + + + P V +YN +++G +SK V +A
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQM--VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+ + P+VVTY +L+ G C R A R+V M K I P+ +N +ID V+ GR
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E E + P +VTY+ L+ G C L+ A ++ M+S+G P TY+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K KVE M L+ +M + G + +TY IL++ C+ KL++A ++ + M G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
++ T +L+H LC K ++A DM + G+ +T+ + K G A A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 146/285 (51%), Gaps = 2/285 (0%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
ILL+ C+ ++ A + K +L P++ + LLNG+ R V DA + +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHE--PSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
PNVV Y T+++G C+ ++VD A+ L+ M K+GI P+ + YN++I GL +GR+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + M+ E P + T+ +L+ K G + A + + MI R P TY+
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ ++++A ++ M+ G PD +TY IL+ CK K++ +++ EM RG
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T T+LI CR K + A F M+ G+ P+ +T+ L
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 6/290 (2%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
NILLN + R + A F +M K P++VT+G+L+ G+CR RV A+ + +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G +PN ++YNT+IDGL ++ + + ++ R GP +VTY SL+ G C +G
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A++++ M R P T+N K G+V +A Y +MI PD +TY +L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +LD A ++ M +GC D+ T ++LI+ C+ K + F +M +RG+V
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCKD 396
+ +T+ L + + G +A+++ C V ++ LL C +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 171/354 (48%), Gaps = 12/354 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSL 82
GHE P V TF L+ + R V A++ F+ MV + ++ ++D L
Sbjct: 146 GHE-PSIV---TFGSLLNGFCRGDRVYDALYMFD-----QMVGMGYKPNVVIYNTIIDGL 196
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK +V A + ++ ++ P V YN L++G S DA R M K + P
Sbjct: 197 CKSKQVDNALDLLNRMEK--DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V T+ L++ + RV A +EM + ++P+ + Y+ +I GL R +E M
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P +VTY+ L+ GYCK+ +E K+ M RG + + TY + + +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GK+ A ++R+M+ G P+ +TY++LL LC K++ A+ + +M+ G D D+ T
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++I +C+ + +A + + +GL+P T+ + K+G+ A L
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 23/298 (7%)
Query: 1 MIKVLAKAKEFDSAWCLL----LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF 56
+I L K+K+ D+A LL D IG PD V+ ++ + +G+ + W+
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIG----PDVVTYNSLI--------SGLCSSGRWSD 239
Query: 57 EFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYN 113
M K F L+D+ K+GRV A E++ + R+ LD P + Y+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD----PDIVTYS 295
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+L+ G + +AE + M + P+VVTY L+ GYC+ ++V+ ++L EM +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G+ N + Y +I G AG+ + R + C P ++TY L+ G C G +E A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
IL M G TYN R K G+V DA ++Y + G PD TY ++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 143/286 (50%), Gaps = 16/286 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ L+ LC GR A+ ++E+ P V +N L++ + V +AE F+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREI----YPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + ++ P++VTY L+ G C R+D A + M +G P+ + Y+ +I+G ++
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 193 GRFEEVSGMMERFLVCEPGP-----TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
+ E GM L CE VTYT L++GYC+AG L A +I + M+ G P
Sbjct: 340 KKVEH--GMK---LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN GK+E A+ + M ++G D +TY+I+++ +CK ++ A +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+ C+G D+ T T ++ L + EA A F M G++P+
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ ++ LL+ + K W +M+ + N+ T L+ +CR ++ A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + + ++++G R + M ++ + P +V Y +++ G CK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ ++ A +L M G P TYN G+ DA + M + PD T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
++ L+ KE ++ A + +EM R D D+ T ++LI+ LC + DEA F M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+G P +T+ L + + K KL MS
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
Y +L R + D+ + M + P++ + L+ ++++ D I L ++M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
GI N N +++ + + + + P++VT+ SL+ G+C+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A + M+ G+ P+ YN K +V++A++L +M + G PD +TY+ L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC + A ++ M R D+ T LI + + EA +E+MIRR L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 352 PHYLTFKRL 360
P +T+ L
Sbjct: 289 PDIVTYSLL 297
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 21/232 (9%)
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF---LVCE 209
G+C RR +EM + GI RF ++ ++ F + C
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGI------------------RFMKLDDSLDLFFHMVQCR 76
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P++ ++ L+ K + + + M G + T N F + ++ A+
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ KMI+ G+ P +T+ LL C+ D++ A+ + +M G ++ +I L
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
C+ + D A M + G+ P +T+ L G + A ++ + M+
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 176/353 (49%), Gaps = 13/353 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAG-MVEAAIWTFEF 58
+I L K K A C L ++ ++ P+ V T+ LI + G ++EA E
Sbjct: 215 IIDSLCKNKLVGEA-CNLYSEMNAKQIYPNVV---TYTTLIYGFCIMGCLIEAVALLNEM 270
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+KN + F IL+D+L K+G++KAA + P V YN L++G
Sbjct: 271 K-----LKNINPDVYTFSILIDALGKEGKMKAAKIVLAVM--MKAYVKPDVVTYNSLVDG 323
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+F VK A+ + M + VTP V +Y +++G C+ + VD AI L +EM+ + + PN
Sbjct: 324 YFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPN 383
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I +N++IDGL ++GR V ++++ ++TY+SL+ CK L+ A + K
Sbjct: 384 TITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFK 443
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI++ P TY K G+++ A +++ ++ GY D TY +++ CK
Sbjct: 444 KMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAG 503
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
D A+ + +M+ GC + T ++I L + D+A +MI RGL+
Sbjct: 504 LFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 154/302 (50%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ LCK G KAA + +E +S P V +YNI+++ ++K V +A + E
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEE--RSIKPDVVMYNIIIDSLCKNKLVGEACNLYSE 234
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY TL+ G+C + + A+ L+ EM+ + I P+ ++ +ID L + G+
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGK 294
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++ + P +VTY SLV GY +++ A + M G P +Y
Sbjct: 295 MKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTI 354
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K V++A++L+ +M P+ +T++ L+ LCK ++ + +M+ R
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + LI LC+ D+A A F+ MI + + P T+ L D K G +AQ
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQ 474
Query: 375 KL 376
++
Sbjct: 475 EV 476
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 2/283 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C G + A ++ K ++ P V ++IL++ + +K A+
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKL--KNINPDVYTFSILIDALGKEGKMKAAKIVLAV 304
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K V P+VVTY +LV+GY + V A + M + G+ P Y +IDGL +
Sbjct: 305 MMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKM 364
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E P +T+ SL+ G CK+G + ++ M R L TY+
Sbjct: 365 VDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSS 424
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++ A+ L++KMI PD TY IL+ LCK +L +A +V + + +G
Sbjct: 425 LIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKG 484
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+D+ T T++I C+ FDEA A M G +P+ +TF
Sbjct: 485 YHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITF 527
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 153/337 (45%), Gaps = 8/337 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K S IL++ C G++ + L + + P V L+ G V
Sbjct: 98 KGITSDLVTLNILINCFCHLGQITLSFSVL--ATILKRGYHPDVITLTTLIKGLCLRGEV 155
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K A +F ++ + ++YGTL+ G C++ AI+L++ + + I+P+ ++YN +
Sbjct: 156 KKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNII 215
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
ID L + E + + P +VTYT+L+ G+C G L A +L M +
Sbjct: 216 IDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNI 275
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P T++ K GK++ A + M+++ PD +TY+ L+ +++ A
Sbjct: 276 NPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKY 335
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
V M G + + T++I LC+ DEA + FE+M + ++P+ +TF L D
Sbjct: 336 VFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLC 395
Query: 366 KRGMTALAQKLCNVM------SSVPRSMELLDSRCKD 396
K G A L + M + V L+D+ CK+
Sbjct: 396 KSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKN 432
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +N +L+ + + A + + +T ++VT L+ +C L ++ + +
Sbjct: 67 PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ + K G P+ I T+I GL G ++ + + E ++Y +L+ G CK
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ + A ++++ + R P YN K V +A NLY +M P+ +T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ C L A+ + EMK + + D+ T ++LI L + K A M+
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306
Query: 347 RRGLVPHYLTFKRLNDEF 364
+ + P +T+ L D +
Sbjct: 307 KAYVKPDVVTYNSLVDGY 324
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 76/186 (40%), Gaps = 3/186 (1%)
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + R L+ P P + +++ K A + K + +G T N
Sbjct: 51 NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F G++ + ++ +++ GY PD +T L+K LC ++ A++ ++
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+D + LI+ LC++ + A ++ R + P + + + D K + A
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA-- 228
Query: 376 LCNVMS 381
CN+ S
Sbjct: 229 -CNLYS 233
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+++ DA+ L+ +M+ P ++ +L L K + AI +SK + +G
Sbjct: 43 HYNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITS 102
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
DL T +LI+ C + + + + +++RG P +T L RG
Sbjct: 103 DLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRG 153
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 170/347 (48%), Gaps = 9/347 (2%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
+G PD F I+ YA+ M++ A+ F+ + N + + L+D+
Sbjct: 334 VGNGVSPD---HHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT----YGALIDA 386
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LCK GRV A F++ +D+ P + V++ L+ G + AE + E+ + +
Sbjct: 387 LCKLGRVDDAVLKFNQM--IDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIR 444
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
+ V + TL+ CR RV A RL+ M + G+ P+ I YNT++DG GR +E + +
Sbjct: 445 LDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKL 504
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
++ + P VTY +L+ GYCKA ++ A + + M+ +G P TYN +
Sbjct: 505 LDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQ 564
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G+ +A LY MI S + TY+I++ LCK + +D A ++ + + +D+ T
Sbjct: 565 TGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFT 624
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ ++I L + + ++A F + GLVP T+ + + K G
Sbjct: 625 ANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 671
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 173/390 (44%), Gaps = 42/390 (10%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ ILI + R G ++ F N +F LL LC RV A
Sbjct: 91 SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVN---DTVIFSQLLKGLCDAKRVDEA 147
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE---NVTPNVVTYG 148
++ +R + P V Y+ILL G+ K ++A M + + TPNVVTY
Sbjct: 148 TDILLRRMP-EFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYT 206
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF--- 205
T+++G C+ + VDRA + + M +G+ PN Y +I G + G+++EV M++
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTH 266
Query: 206 --------------LVCEPG------------------PTMVTYTSLVKGYCKAGDLEGA 233
+C+ G P + Y L+ GY G L
Sbjct: 267 GLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEM 326
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
L +M+ G P +N F ++K +++AM+++ KM + +P+ +TY L+
Sbjct: 327 HSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDA 386
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LCK ++D A+ +M G D+ + L++ LC + K+++A F +++ +G+
Sbjct: 387 LCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLD 446
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ F L + G AQ+L ++M V
Sbjct: 447 TVFFNTLMCNLCREGRVMEAQRLIDLMLRV 476
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 41/310 (13%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF-- 131
++ +LLD LCK GR A F + + P V +Y ILL+G+ ++ + F
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDS--VIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331
Query: 132 ---------------------------------WLEMRKENVTPNVVTYGTLVEGYCRLR 158
+ +MR++ ++PN+VTYG L++ C+L
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLG 391
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VT 216
RVD A+ +M EG+ P+ V+++++ GL ++E+ + F V + G + V
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELF--FEVLDQGIRLDTVF 449
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+ +L+ C+ G + A +++ +M+ G P +YN G++++A L ++
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G PD++TY+ LL CK ++D A + +EM +G D+ T ++H L + +F
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569
Query: 337 EASAEFEDMI 346
EA + MI
Sbjct: 570 EAKELYLSMI 579
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F L+ +LC++GRV A L P V YN L++G + + +A +
Sbjct: 449 FFNTLMCNLCREGRVMEAQRLIDLM--LRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+ + P+ VTY TL+ GYC+ RR+D A L +EM +G+ P+ + YNT++ GL + G
Sbjct: 507 VIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 566
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
RF E + + + TY ++ G CK ++ A K+ + S+ T N
Sbjct: 567 RFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTAN 626
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
K G+ EDAM+L+ + G PD TY ++ + L KE L+
Sbjct: 627 IMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 674
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 165/386 (42%), Gaps = 11/386 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKDTFV--ILIRRYARAGMVEAAIWTFE 57
++K L AK D A +LL ++ P+F + D F IL++ + E A+
Sbjct: 134 LLKGLCDAKRVDEATDILLRRM-----PEFGCTPDVFSYSILLKGFCNEKRAEEALELLS 188
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ D + + ++D LCK V A F + +D+ P Y L++
Sbjct: 189 MMAD-DGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVF--QHMIDKGVRPNNHTYTCLIH 245
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ K+ + EM + P+ Y L++ C+ R A + + ++GI+P
Sbjct: 246 GYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKP 305
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N +Y ++ G G E+ ++ + P + + Y K ++ A I
Sbjct: 306 NVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIF 365
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M + P+ TY K G+V+DA+ + +MI+ G TPD + L+ LC
Sbjct: 366 DKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTV 425
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
DK + A ++ E+ +G +D L+ LCR + EA + M+R G+ P +++
Sbjct: 426 DKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISY 485
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L D G A KL +V+ S+
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVIVSI 511
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 163/405 (40%), Gaps = 44/405 (10%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
+A+E ++ D G P+ V T+ +I +A MV+ A F+ + K
Sbjct: 179 RAEEALELLSMMADDGDGSHTPNVV---TYTTVIDGLCKAQMVDRAKGVFQHMID----K 231
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+ L+ G+ K + + P +Y +LL+ ++
Sbjct: 232 GVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMST--HGLQPDCYIYAVLLDYLCKNGRCT 289
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGY-------------------------------- 154
+A + + ++ + PNV YG L+ GY
Sbjct: 290 EARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMF 349
Query: 155 CRLRR---VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
C + +D A+ + +MR++ + PN + Y +ID L + GR ++ + +
Sbjct: 350 CAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMT 409
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + ++SLV G C E A ++ ++ +G +N + G+V +A L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL 469
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M+ G PD ++Y+ L+ C ++D A ++ + G D T L+H C+
Sbjct: 470 IDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCK 529
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ D+A + F +M+ +GL P +T+ + + G + A++L
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 574
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAE---RFWLEMRKE---NVTPNVVTYGTLVEGY 154
L + +VR +N LL R++ +E + M +E V P+ TY L+ +
Sbjct: 43 LTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCF 102
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPN-AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-- 211
CR+ R+ + K G N ++++ ++ GL +A R +E + ++ R + E G
Sbjct: 103 CRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMP-EFGCT 161
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG---FLPSPTTYNYFFRYFSKFGKVEDA 268
P + +Y+ L+KG+C E A ++L MM G P+ TY K V+ A
Sbjct: 162 PDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRA 221
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+++ MI+ G P+ TY L+ K +Q+ +EM G D +L+
Sbjct: 222 KGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDY 281
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LC+ + EA F+ +IR+G+ P+ + L + G + ++M
Sbjct: 282 LCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 2/257 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C GR+ A++ + P YN LL+G+ +++ + DA + E
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVIVSI--GLKPDKVTYNTLLHGYCKARRIDDAYSLFRE 542
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +TP+VVTY T++ G + R A L M + N YN +I+GL +
Sbjct: 543 MLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNF 602
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + T ++ K G E A + + + G +P TY
Sbjct: 603 VDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCL 662
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +E+ L+ M E+G P+ + L++ L ++ A ++ +
Sbjct: 663 IAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKN 722
Query: 315 CDIDLDTSTMLIHLLCR 331
++ T++MLI + R
Sbjct: 723 FSLEASTTSMLISIYSR 739
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 13/278 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN--FDSGASLFEILLDSLCKQ 85
PD +S +T L+ + G ++ A A LD++ + + LL CK
Sbjct: 480 PDVISYNT---LVDGHCLTGRIDEA------AKLLDVIVSIGLKPDKVTYNTLLHGYCKA 530
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
R+ A F R+ L + P V YN +L+G F++ +A+ +L M N+
Sbjct: 531 RRIDDAYSLF--REMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY ++ G C+ VD A ++ + + ++ + N +I L++ GR E+ +
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI 648
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P + TY + + K G LE ++ M G P+ N R+ G +
Sbjct: 649 SAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDI 708
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
A K+ E ++ + T +L+ I + + LA
Sbjct: 709 NRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLA 746
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 21/251 (8%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS+ V A LE+ E V + G+L ++ A++L EM +
Sbjct: 3 RSRRVTAAADRCLEL--ERVIADRAHSGSL--------GLNDALKLFDEMLTHARPASVR 52
Query: 181 VYNTVIDGLVEA---GRFEEVSGMMERFL---VCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+N ++ + A E V + R + + P+ TYT L+ +C+ G L+
Sbjct: 53 AFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGF 112
Query: 235 KILKMMISRGFLPSPTT-YNYFFRYFSKFGKVEDAMN-LYRKMIESGYTPDRLTYHILLK 292
+++ G+ + T ++ + +V++A + L R+M E G TPD +Y ILLK
Sbjct: 113 AAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLK 172
Query: 293 ILCKEDKLDLAIQVSKEMKCRG---CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
C E + + A+++ M G ++ T T +I LC+ D A F+ MI +G
Sbjct: 173 GFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKG 232
Query: 350 LVPHYLTFKRL 360
+ P+ T+ L
Sbjct: 233 VRPNNHTYTCL 243
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 176/345 (51%), Gaps = 8/345 (2%)
Query: 38 ILIRRYARAGMVEAA------IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
ILI + + G + +A I + N + G L + D C G++K A
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F+K + ++ P V + IL++G+ + VK+A+ M + + P VVTY +L+
Sbjct: 162 VDLFNKM--ILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GY +++V++A + M + G+ P+ Y+ +I+G + +E +++ +
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VTY+SL+ G CK+G + A K++ M RG P+ TY+ K +V++A+ L
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+M G P+ TY IL+K LC+ KL+ A +V +++ +G ++++ T T++I C
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCD 399
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
FDEA M G +P+ T++ + K+ +A+KL
Sbjct: 400 KGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKL 444
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 153/304 (50%), Gaps = 12/304 (3%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL-----LNGWFRSKN-----V 125
IL++S C+ G + +A K L + P N L LNG K+ +
Sbjct: 101 NILINSFCQLGHIPSAFSVL--TKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
KDA + +M EN+ P+V T+ LV+G+C+ RV A ++ M +GI+P + YN++
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+DG + + + P + +Y+ L+ G+CK ++ A ++LK M +
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+P+ TY+ K GK+ A+ L +M + G P+ +TY +L LCK ++D AI
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ +MK +G ++ T T+LI LC+ K ++A FED++ +G + T+ + F
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC 398
Query: 366 KRGM 369
+G+
Sbjct: 399 DKGL 402
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 144/276 (52%), Gaps = 6/276 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF IL+ + + G V+ A M++ G + L+D +V A
Sbjct: 179 TFTILVDGFCKEGRVKEAKNVLAMM----MIQGIKPGVVTYNSLMDGYFLVKQVNKAKSI 234
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F+ +L S P ++ Y+IL+NG+ + K + +A EM + + PNVVTY +L++G
Sbjct: 235 FNTMAQLGVS--PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++ A++LV EM G PN + Y++++D L + + + ++ + P M
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT L+KG C++G LE A K+ + ++ +G + TY + F G ++A+ L K
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSK 412
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
M ++G P+ TY I++ L K+D+ ++A ++ EM
Sbjct: 413 MEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 21/299 (7%)
Query: 90 AASEYFHKRKELD-----------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ S FH ++D Q+ P +N +L +SK+ +M
Sbjct: 32 STSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFR 91
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE------- 191
+ PN+V L+ +C+L + A ++ ++ K G +PN I NT+I GL
Sbjct: 92 GIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDK 151
Query: 192 ---AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
G+ ++ + + ++ P + T+T LV G+CK G ++ A +L MM+ +G P
Sbjct: 152 HCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPG 211
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN + +V A +++ M + G +PD +Y IL+ CK +D A+++ K
Sbjct: 212 VVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLK 271
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EM + ++ T + LI LC+ K A ++M RG P+ +T+ + D K
Sbjct: 272 EMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKN 330
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ IL++ CK +K E KE+ P V Y+ L++G +S + A +
Sbjct: 250 YSILINGFCK---IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVD 306
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM PN+VTY ++++ C+ +VD AI L+ +M+ +GI+PN Y +I GL ++G
Sbjct: 307 EMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSG 366
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E+ + E LV + TYT +++G+C G + A +L M G +P+ TY
Sbjct: 367 KLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYE 426
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGY 280
K + E A L +MIE+ +
Sbjct: 427 IIILSLFKKDENEMAEKLLCEMIETNF 453
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 16/294 (5%)
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +V DA + + ++N TP + + ++ + + + L ++M GI+PN
Sbjct: 37 FHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 96
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG----------YCKAG 228
+ N +I+ + G ++ + L P +T +L+KG +C G
Sbjct: 97 LVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVG 156
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
L+ A + MI P T+ F K G+V++A N+ M+ G P +TY+
Sbjct: 157 KLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYN 216
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ +++ A + M G D+ + ++LI+ C++ DEA ++M +
Sbjct: 217 SLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK 276
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRCKD 396
++P+ +T+ L D K G + A KL + M ++ +LD+ CK+
Sbjct: 277 QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKN 330
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 239 MMISRGFLPSP----------TTYNYFFRYFS------KFGKVEDAMNLYRKMIESGYTP 282
M++ GF+P T+ F YFS V+DA++L+ ++++ TP
Sbjct: 1 MLLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTP 60
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ ++ +L L K + +S++M+ RG +L +LI+ C++ A +
Sbjct: 61 PNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVL 120
Query: 343 EDMIRRGLVPHYLTFKRL 360
+++ G P+ +T L
Sbjct: 121 TKILKMGYKPNTITLNTL 138
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + D+A LL P+ T+ ILI+ ++G +E A FE
Sbjct: 323 ILDALCKNHQVDNAIALLTQMKNQGIQPNMY---TYTILIKGLCQSGKLEDARKVFEDL- 378
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+VK + + +++ C +G A K + D P + Y I++ F
Sbjct: 379 ---LVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME--DNGCIPNAKTYEIIILSLF 433
Query: 121 RSKNVKDAERFWLEMRKEN 139
+ + AE+ EM + N
Sbjct: 434 KKDENEMAEKLLCEMIETN 452
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 164/341 (48%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + +T + + R+ RA A + +VK + I+++ LCK+G
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRM-------VVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A K ++ P V +YN +++ KNV DA + EM + + PNVVTY
Sbjct: 237 IDLALSLLKKMEQ--GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ C R A RL+ +M + I PN + ++ +ID V+ G+ E + + +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + TY+SL+ G+C L+ A + ++MIS+ P+ TYN + F K +V++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
M L+R+M + G + +TY L+ + + D A V K+M G D+ T ++L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LC K + A FE + R + P T+ + + K G
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ L + R A + + + P + Y I++NG + ++ A +
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRM--VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P VV Y T+++ C + V+ A+ L EM +GI PN + YN++I L GR
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + S ++ + + P +VT+++L+ + K G L A K+ MI R P TY+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F ++++A +++ MI P+ +TY+ L+K CK ++D +++ +EM RG
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ T T LIH + + D A F+ M+ G++P +T+ L D G A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 9/357 (2%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ D A L D + P V F L+ A+ + I E NL + N
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVE---FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
+ + IL++ C++ ++ A K +L + P + N LLNG+ + DA
Sbjct: 118 T----YSILINCFCRRSQLSLALAVLAKMMKL--GYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+M + P+ T+ TL+ G R R A+ LV M +G +P+ + Y V++GL
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G + ++++ + P +V Y +++ C ++ A + M ++G P+
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN R +G+ DA L MIE P+ +T+ L+ KE KL A ++ E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
M R D D+ T + LI+ C + DEA FE MI + P+ +T+ L F K
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 179/386 (46%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + D A LL G P V +T + + Y V A+ F +
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN---VNDALNLFTEMD 283
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + L+ LC GR AS +++ P V ++ L++ +
Sbjct: 284 N----KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKINPNVVTFSALIDAFV 337
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +AE+ + EM K ++ P++ TY +L+ G+C R+D A + + M + PN +
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
YNT+I G +A R +E M +R LV G T VTYT+L+ G+ +A + + A +
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLV---GNT-VTYTTLIHGFFQARECDNAQIV 453
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M+S G LP TY+ GKVE A+ ++ + S PD TY+I+++ +CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
K++ + + +G ++ T T ++ CR +EA A F +M G +P T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L + G A + +L M S
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRS 599
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 13/325 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + A LL D I P+ V TF LI + + G + A ++
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVV---TFSALIDAFVKEGKLVEAEKLYD--- 350
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + D + L++ C R+ A F + + P V YN L+ G+
Sbjct: 351 --EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTLIKGF 406
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V + + EM + + N VTY TL+ G+ + R D A + K+M +G+ P+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y+ ++DGL G+ E + E + P + TY +++G CKAG +E +
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ TY F + G E+A L+R+M E G PD TY+ L++ ++
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTM 324
+ ++ +EM R C D ST+
Sbjct: 587 KAASAELIREM--RSCRFVGDASTI 609
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 183/395 (46%), Gaps = 17/395 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L +K D A ++ + H PD ++ + +I + RA +++A +
Sbjct: 98 LIHGLFTSKTIDKAI-QVMHILENHGHPDLIAYNA---IITGFCRANRIDSAYQVLDRMK 153
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K F + IL+ SLC +G + +A E+ K + L ++ PTV Y IL+
Sbjct: 154 N----KGFSPDIVTYNILIGSLCSRGMLDSALEF--KNQLLKENCKPTVVTYTILIEATL 207
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A + EM + N+ P++ TY +++ G CR VDRA +++ + +G P+ I
Sbjct: 208 LQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVI 267
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN ++ GL+ G++E +M + +VTY+ L+ C+ G +E +LK M
Sbjct: 268 TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM 327
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P Y+ K G+V+ A+ + MI G PD + Y+ +L LCK+ +
Sbjct: 328 KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRA 387
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A+ + +++ GC + + + L A +M+ +G+ P +T+ L
Sbjct: 388 DEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSL 447
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCK 395
+ GM A +L ME+ S CK
Sbjct: 448 ISCLCRDGMVDEAIELL-------VDMEMESSECK 475
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 6/308 (1%)
Query: 78 LLDSL---CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
LL SL CK G S YF R +++ P V + L++G F SK + A + +
Sbjct: 60 LLKSLSRSCKAGNFNE-SLYF-LRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQV-MH 116
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + P+++ Y ++ G+CR R+D A +++ M+ +G P+ + YN +I L G
Sbjct: 117 ILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGM 176
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + L PT+VTYT L++ G ++ A K+L M+ P TYN
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R + G V+ A + + GY PD +TY+ILL+ L + K + ++ +M RG
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C+ ++ T ++LI +CR K +E +DM ++GL P + L K G LA
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356
Query: 375 KLCNVMSS 382
++ +VM S
Sbjct: 357 EVLDVMIS 364
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 161/397 (40%), Gaps = 79/397 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I +A DSA+ +LD++ PD V T+ ILI GM+++A+ EF
Sbjct: 132 IITGFCRANRIDSAY-QVLDRMKNKGFSPDIV---TYNILIGSLCSRGMLDSAL---EFK 184
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD----------------- 102
N L + +N + IL+++ QG + A + + E++
Sbjct: 185 NQL-LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243
Query: 103 ----------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ +AP V YNILL G + +M NVVT
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ CR +V+ + L+K+M+K+G++P+ Y+ +I L + GR + +++ +
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +V Y +++ CK + A I + + G P+ ++YN F G
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423
Query: 267 DAMNLYRKMIESGYTPDRLTYH-------------------------------------I 289
A+ + +M++ G PD +TY+ I
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+L LCK ++ AI+V M +GC + T T LI
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLI 520
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 17/283 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD + T+ IL+R G++ W + DMV + ++ + +L+ S+C+ G
Sbjct: 264 PDVI---TYNILLR-----GLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDG 315
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V+ K+ + P Y+ L+ + V A M + P++V
Sbjct: 316 KVEEGVGLLKDMKK--KGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVN 373
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ C+ +R D A+ + +++ + G PNA YN++ L G GM+ L
Sbjct: 374 YNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEML 433
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL--KMMISRGFLPSPTTYNYFFRYFSKFGK 264
P +TY SL+ C+ G ++ A ++L M S PS +YN K +
Sbjct: 434 DKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSR 493
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKIL----CKEDKLDLA 303
V DA+ + M++ G P+ TY L++ + C D DLA
Sbjct: 494 VSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLA 536
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 11/267 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ +LI R G VE + + DM K ++ L+ +LCK+GRV A E
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLK-----DMKKKGLKPDGYCYDPLIAALCKEGRVDLAIE 357
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ P + YN +L + K +A + ++ + +PN +Y ++
Sbjct: 358 VLDVM--ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSA 415
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG 211
RA+ ++ EM +G++P+ I YN++I L G +E ++ + E
Sbjct: 416 LWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECK 475
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P++V+Y ++ G CK + A ++L M+ +G P+ TTY + G + DA +L
Sbjct: 476 PSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535
Query: 272 YRKMIESGYTPDRLTYHILLKILCKED 298
++ + ++ L K CK D
Sbjct: 536 ATTLVNMDAISEH-SFERLYKTFCKLD 561
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 151/299 (50%), Gaps = 9/299 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW--APTVRVYNILLNGWFR---SKNVKDAE 129
F ++ LC+ G+++ A + K +W AP+V YN L++G+ + + N+ +
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIK----AWGLAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + ++P VT+G L+ GYC+ A+R+ +EM+++GI + + YN++I GL
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ EE +ME P +T+ ++KG+CK G + A+ + M R P
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
Y + + GK+EDAM + M + G +P+ TY+ L+ + A + E
Sbjct: 370 VIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
MK +G + D+ T +LI LC + +A ++M GL P++LT+ + F +G
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 4/300 (1%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A F +L++ CK AA F + K+ Q A +V YN L++G V++ +
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQ--QGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM ++PN +T+G +++G+C+ + A + M + +EP+ ++Y +IDG
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRR 381
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E+ + E P + TY L+ G+ ++GD AS +L M +G T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM- 310
YN G+V A+ L +M E G P+ LTY+ +++ C + + A ++ M
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
KCR ++ T + I C++ K DEA+ +M+ + LVP+ +T++ + + ++G T
Sbjct: 502 KCRK-RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++L+ +L + + A + F E P+ N LL G +K V AE+ +
Sbjct: 121 IADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFR 180
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE-- 191
+ V+P++ T+ T++ G CR+ ++ +A + K+++ G+ P+ YN++IDG +
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240
Query: 192 -AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AG V +++ + PT VT+ L+ GYCK + A ++ + M +G S
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN GKVE+ + L +M + G +P+ +T+ +LK CK+ + A M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
R + D+ T+LI R+ K ++A A E M ++G+ P+ T+ L F + G
Sbjct: 361 TERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 8/280 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI Y + AA+ FE + + + L+ LC +G+V+ +
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQ----QGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ ++L S P + +L G+ + + DA + M + NV P+VV Y L++GY
Sbjct: 322 MEEMEDLGLS--PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGY 379
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RL +++ A+ + + M K+GI PN YN +I G +G + SG+++ +
Sbjct: 380 RRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADV 439
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ C G++ A K+L M G P+ TYN + F G ++ A + +
Sbjct: 440 VTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM--KC 312
M + + +TY++ +K C+ K+D A + EM KC
Sbjct: 500 MEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKC 539
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 11/317 (3%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S LL L RV A + F R L + +P + +N +++G R ++ A
Sbjct: 157 SSVNALLAGLVGAKRVDLAEKAF--RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 133 LEMRKENVTPNVVTYGTLVEGYCR------LRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+++ + P+V TY +L++GYC+ + VD L+KEM + GI P A+ + +I
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLI 271
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G + + E ++VTY SL+ G C G +E K+++ M G
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ T+ + F K G + DA + M E PD + Y IL+ + K++ A+ V
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ M +G ++ T LI R + AS ++M +G+ +T+ L
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451
Query: 367 RGMTALAQKLCNVMSSV 383
+G A KL + MS V
Sbjct: 452 KGEVRKAVKLLDEMSEV 468
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 25/268 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI G VE + E +L + N + F +L CK+G + A+++
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT----FGCVLKGFCKKGMMADANDW 356
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
E ++ P V +Y IL++G+ R ++DA M K+ ++PNV TY L+ G+
Sbjct: 357 IDGMTE--RNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R A L+ EM+++GIE + + YN +I L G + +++ P
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY ++++G+C G+++ A +I M + TYN F +YF + GK+++A +L +
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNE 534
Query: 275 MI-------------------ESGYTPD 283
M+ E GYTPD
Sbjct: 535 MLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI ++R+G +A + K ++ + +L+ +LC +G V+ A +
Sbjct: 406 TYNCLITGFSRSGDWRSASGLLDEMKE----KGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ E+ P YN ++ G+ N+K A M K NVVTY ++ +
Sbjct: 462 LDEMSEV--GLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
C++ ++D A L+ EM + + PN I Y T+ +G++E G ++ G
Sbjct: 520 CQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 189/416 (45%), Gaps = 45/416 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK LA +K D A L + P+ V+ + +I +AG +E + FE +
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVA---YTAVIDGLLKAGRIEDGLKNFEEMS 170
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V + + +++D LCK + A + F + + + P Y L++G+
Sbjct: 171 GSSCVPT----RTTYTVVIDGLCKAQMLPDACKVFEQM--VQKGCVPDTITYTTLIDGFS 224
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE---- 176
++ + +A + M + P VTYG++V G+C+L ++ A ++ +MR+ G E
Sbjct: 225 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLF 284
Query: 177 -------------------------------PNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
P+ I+Y ++ID L GR E + +
Sbjct: 285 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +TY ++++ + K G++E A +IL++M G P YN + K +V
Sbjct: 345 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERV 404
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRGCDIDLDTSTM 324
+ A +Y +M+ SG P+ +T+++L+ L K+ K D A + KEM + L + T+
Sbjct: 405 DQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTI 464
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LI L + + EA +F++MI RG++P T+ L K G A+KL M
Sbjct: 465 LIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 520
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 168/381 (44%), Gaps = 13/381 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I LA + D A+ I PD ++ F LI + +AG + A
Sbjct: 13 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIA---FTTLIHGFCKAGQPQVGHKLLNQA- 68
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+K F L+ ++ CK G + YF + + + V Y ++ G
Sbjct: 69 ----LKRFRPDVFLYTSVIHGYCKAGDLDTG--YF---RAVTPKASLDVISYTTVIKGLA 119
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
SK + +A + E++ +PNVV Y +++G + R++ ++ +EM P
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VIDGL +A + + E+ + P +TYT+L+ G+ KA ++ A K+L +M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++G P+ TY F K + +A + +M E G P + LL + +
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A QV EM RGC D+ T LI LL + EA F+ MI +G P LT+ +
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359
Query: 361 NDEFKKRGMTALAQKLCNVMS 381
F K G A ++ +M+
Sbjct: 360 IQNFSKIGNVEAAGEILELMA 380
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 119/243 (48%), Gaps = 3/243 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ L+D L GRV A F +++ AP Y ++ + + NV+ A
Sbjct: 320 LYTSLIDLLFSTGRVPEARHVFDSM--IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 377
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M K V P+ Y +L++GY +L RVD+A + M GI+PNA+ +N ++ GL + G
Sbjct: 378 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437
Query: 194 RFEEVSGMMERFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ + + + L E PT+V+YT L+ G KAG + A + MI RG +P TY
Sbjct: 438 KTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTY 497
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+K G++ +A L M++ G PD Y L+ L +D A V +EM
Sbjct: 498 TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK 557
Query: 313 RGC 315
RGC
Sbjct: 558 RGC 560
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+ G +F LL +GR + A + + + AP V +Y L++ F + V +A
Sbjct: 280 EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA--RGCAPDVILYTSLIDLLFSTGRVPEA 337
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ M ++ P+ +TYGT+++ + ++ V+ A +++ M K G+ P+ YN+++DG
Sbjct: 338 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
V+ R ++ G+ +R + P VT+ L+ G K G + A + K M+ + +P
Sbjct: 398 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP- 456
Query: 249 PT--TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
PT +Y K G+V +A +++MI+ G P+ TY L+ L K ++ A ++
Sbjct: 457 PTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 516
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++M G + D+ + LI L D A F++M++RG P+ +T+K L F+
Sbjct: 517 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRA 576
Query: 367 RG 368
G
Sbjct: 577 AG 578
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 128/307 (41%), Gaps = 31/307 (10%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PT+ YN +++G + +A +F+ M P+V+ + TL+ G+C+ + +L
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 167 VKEMRKE---------------------------GIEPNA----IVYNTVIDGLVEAGRF 195
+ + K + P A I Y TVI GL ++ R
Sbjct: 65 LNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRI 124
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E + E P +V YT+++ G KAG +E K + M +P+ TTY
Sbjct: 125 DEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVV 184
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K + DA ++ +M++ G PD +TY L+ K K+D A ++ M +G
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 244
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ T ++H C++ +EA M RG P F L + +G A +
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 304
Query: 376 LCNVMSS 382
+ M++
Sbjct: 305 VLTEMTA 311
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI--LLDSLCKQGRVKAAS 92
T+ +I+ +++ G VEAA L+++ G F L+D K RV A
Sbjct: 355 TYGTIIQNFSKIGNVEAA------GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 408
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGTLV 151
+ + + P +N+L++G F+ A + EM KE V P +V+Y L+
Sbjct: 409 GVYDRM--VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G + RV A +EM GI P Y ++I L +AGR E ++E +
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + Y++L+ G + ++ A + + M+ RG P+ TY R F G+ D
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 582
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ IL+D L K GRV SE F + +E+ D+ P Y L+ ++ + +A++
Sbjct: 462 YTILIDGLGKAGRV---SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 518
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K V P+V Y L+ G VD A + +EM K G PN + Y + G AG
Sbjct: 519 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578
Query: 194 RFEEVSGMMERF 205
R ++ + + F
Sbjct: 579 RALDLEAVKQHF 590
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 190/385 (49%), Gaps = 14/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK L +A + A L+ + +PD + TF +++ + G ++ A+ E
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPD---EKTFTTIMQGFIEEGNLDGAMRVKE--- 254
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV+ +L++ CK+GR++ A + + L + + P +N+L+NG
Sbjct: 255 --QMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMS-LREGFFPDKYTFNMLVNGL 311
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ +VK A M +E P++ TY +L+ G C+L VD A++++ +M + PN
Sbjct: 312 SKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNT 371
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
+ YNT+I L + + EE + + ++ G P + TY SL++G C + + A ++
Sbjct: 372 VTYNTIISTLCKENQVEEATKLA--LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELY 429
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M ++G P TYN GK+++A+NL ++M SG + +TY+ L+ CK
Sbjct: 430 KEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKN 489
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++ A ++ +M+ +G + T LI LC+ + +EAS + MI GL P T+
Sbjct: 490 KRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTY 549
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
L F K G A + M+S
Sbjct: 550 NSLLTYFCKAGDIKKAADIVQTMAS 574
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 45/366 (12%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV--KNFDSGASLFEILLDSLCKQGR 87
F K TF +L+ ++ G V+ A+ +DM+ + FD + L+ LCK G
Sbjct: 298 FPDKYTFNMLVNGLSKTGHVKHALEV------MDMMLREGFDPDIYTYNSLISGLCKLGE 351
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + ++ E D S P YN +++ + V++A + L + + + P+V TY
Sbjct: 352 VDEAVKVLNQMIERDCS--PNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTY 409
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEP------------------------------ 177
+L++G C R A+ L KEM+ +G P
Sbjct: 410 NSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEV 469
Query: 178 -----NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
N I YNT+IDG + R E + ++ + VTY +L+ G CK+ +E
Sbjct: 470 SGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEE 529
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
AS+++ MI G P TYN YF K G ++ A ++ + M G PD +TY L+
Sbjct: 530 ASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIA 589
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LCK +++ A ++ + ++ +G ++ +I L R + EA F +MI + P
Sbjct: 590 GLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAP 649
Query: 353 HYLTFK 358
+T+K
Sbjct: 650 DAVTYK 655
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 192/430 (44%), Gaps = 44/430 (10%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGM---------------- 48
L KA EFD+ +L + V D D+ ++ I YA G+
Sbjct: 99 LGKAGEFDAMKDILKEMKISLSVID---NDSLLVFIESYASFGLYNEILQFVDAMEVEFG 155
Query: 49 VEAAIWTFEF-------ANNLDMVKNFDSG---------ASLFEILLDSLCKQGRVKAAS 92
V A + F N L +V+ S S F IL+ +LC+ +++ A
Sbjct: 156 VVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAI 215
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+ + D P + + ++ G+ N+ A R +M + VT LV
Sbjct: 216 LLMEEME--DFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVN 273
Query: 153 GYCRLRRVDRAIRLVKEMR-KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G+C+ R++ A+R ++EM +EG P+ +N +++GL + G + +M+ L
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + TY SL+ G CK G+++ A K+L MI R P+ TYN K +VE+A L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ G PD TY+ L++ LC +A+++ KEMK +GC D T MLI LC
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM--SSVPRSM-- 387
K EA ++M G + +T+ L D F K A A+++ + M V R+
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513
Query: 388 --ELLDSRCK 395
L+D CK
Sbjct: 514 YNTLIDGLCK 523
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 134/223 (60%), Gaps = 4/223 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWL 133
+ +L+DSLC +G+++ A + KE++ S A V YN L++G+ ++K + +AE +
Sbjct: 444 YNMLIDSLCFRGKLQEA---LNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFD 500
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + V+ N VTY TL++G C+ RV+ A +L+ +M EG+ P+ YN+++ +AG
Sbjct: 501 QMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAG 560
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ + +++ P +VTY +L+ G CKAG +E A+K+L+ + +G +P YN
Sbjct: 561 DIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYN 620
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ + + ++A+ L+R+MIE PD +TY I+ + LC+
Sbjct: 621 PVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQ 663
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 177/385 (45%), Gaps = 18/385 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E D A +L I P+ V+ +T +I + VE A
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNT---IISTLCKENQVEEA-------T 391
Query: 61 NLDMV---KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L +V K + L+ LC A E + + K + P YN+L++
Sbjct: 392 KLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMK--TKGCHPDEFTYNMLID 449
Query: 118 GW-FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
FR K +++A EM NV+TY TL++G+C+ +R+ A + +M +G+
Sbjct: 450 SLCFRGK-LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVS 508
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
N++ YNT+IDGL ++ R EE S +M++ ++ P TY SL+ +CKAGD++ A+ I
Sbjct: 509 RNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADI 568
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
++ M S G P TY K G+VE A L R + G Y+ +++ L +
Sbjct: 569 VQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFR 628
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYL 355
+ A+++ +EM + D T ++ LC+ EA +M+ RG VP +
Sbjct: 629 RKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFS 688
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVM 380
+F L + M KL +++
Sbjct: 689 SFYMLAEGLFSLAMVGTLIKLIDMV 713
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 37/247 (14%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
++ +P++ ++ V+ L +AG F+ + +++ + + ++ Y G
Sbjct: 81 KQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLY 140
Query: 231 EGASKILKMM-ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ + M + G + + YN+ K++ + M+ G PD T++I
Sbjct: 141 NEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200
Query: 290 LLKILCK-----------------------------------EDKLDLAIQVSKEMKCRG 314
L+K LC+ E LD A++V ++M G
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM-IRRGLVPHYLTFKRLNDEFKKRGMTALA 373
C + T +L++ C+ + +EA E+M +R G P TF L + K G A
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHA 320
Query: 374 QKLCNVM 380
++ ++M
Sbjct: 321 LEVMDMM 327
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + + +G+ + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ 414
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+++ C+ + S ++M R G P +T+ L
Sbjct: 380 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVL 428
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ N S +F L+ + + G ++ A E + +E + W P +L +
Sbjct: 58 FAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRKVLEH 116
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 117 -LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRP 175
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G +E + L P + TY+ L+ G CK ++GA+ +
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLF 235
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + EM +G D T T LI C+ D A + MI+ + + +
Sbjct: 296 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L + G + A+K+ M SV
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSV 381
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+ F + L + P + L++G ++ V A + +M +++ P+++TY
Sbjct: 228 MDGANGLFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 346 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 406 GSKLLKEMQRDGHAPSVVTYNVLM 429
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
SL E+++ ++G+ +AS F E + + V++ L+ + S ++DA +
Sbjct: 40 SLIEVVVS---RKGK-GSASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECY 95
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
R+ + T ++E +L+ +E+ + G + +N ++ +
Sbjct: 96 RLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKD 155
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G + + P++V+Y +L+ GY + GDL+ ++ M++ G P TY
Sbjct: 156 GDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY 215
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K K++ A L+ +M+ G P+ +T+ L+ CK ++DLA+++ K+M
Sbjct: 216 SVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ DL T LI+ LC+ +A ++M +GL P T+ L D K G
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 44/253 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A L + + VP+ V TF LI + + G V+ A+ ++
Sbjct: 218 LINGLCKESKMDGANGLFDEMLVKGLVPNGV---TFTTLIDGHCKNGRVDLAMEIYKQML 274
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ + + + L+ LCK+G +K A + + + P Y L++G
Sbjct: 275 SQSLLPDLIT----YNTLIYGLCKKGDLKQAHDLIDEMSM--KGLKPDKFTYTTLIDGCC 328
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ A M +EN+ + V Y L+ G C+ R A ++++EM G++P+
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDT- 387
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
TYT +V +CK GD+ SK+LK M
Sbjct: 388 ----------------------------------GTYTMIVNEFCKKGDVWKGSKLLKEM 413
Query: 241 ISRGFLPSPTTYN 253
G PS TYN
Sbjct: 414 QRDGHAPSVVTYN 426
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 279 LPDLITYNT---LIYGLCKKGDLKQA---HDLIDEMSM-KGLKPDKFTYTTLIDGCCKEG 331
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E H+++ + ++ Y L++G + DAE+ EM + P+ T
Sbjct: 332 DLDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGT 389
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
Y +V +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 390 YTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 191/402 (47%), Gaps = 40/402 (9%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFE------------FANNL--DMVKNFDSGAS---- 73
S F ++++ Y G+ + A++ F+ N+L ++VKN ++ +
Sbjct: 121 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 180
Query: 74 -------------LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ I++++ CK G+V A+ + K + L P + Y+ L+NG+
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL--GVEPNIVTYHSLINGYV 238
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNA 179
+V+ A+ M ++ V+ NVVTY L++GYC+ ++D A ++++ M++E + P+
Sbjct: 239 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 298
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +IDG G+ ++ +++ L + SL+ GYCK G++ A ++
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ P +YN + + G +A NL KM++ G P LTY+ LLK LC+
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A+Q+ M RG D + L+ L +M F+ AS ++D++ RG +TF
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ K G A+++ + M + S + L+D CK
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 171/377 (45%), Gaps = 43/377 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V T+ LI Y G VEAA +F + + +N + + +L+ CKQ +
Sbjct: 225 PNIV---TYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT----YTLLIKGYCKQCK 277
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM------------ 135
+ A + +E + + P R Y +L++G+ R+ + DA R EM
Sbjct: 278 MDEAEKVLRGMQE-EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 336
Query: 136 ---------RKE--------------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
R E N+ P+ +Y TL++GYCR A L +M +
Sbjct: 337 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 396
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
EGIEP + YNT++ GL G F++ + + P V Y++L+ G K + EG
Sbjct: 397 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 456
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
AS + K +++RGF S T+N K GK+ +A ++ KM + G +PD +TY L+
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 516
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
CK + A +V M+ ++ LI L + + E + +M RGL P
Sbjct: 517 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 576
Query: 353 HYLTFKRLNDEFKKRGM 369
+ +T+ L D + K GM
Sbjct: 577 NIVTYGALIDGWCKEGM 593
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 186/436 (42%), Gaps = 69/436 (15%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++K L + FD A W L++ + PD V T + G+ + + FE
Sbjct: 409 LLKGLCRVGAFDDALQIWHLMMKR---GVAPDEVGYSTLL--------DGLFK--MENFE 455
Query: 58 FANNL---DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS---------- 104
A+ L + + F F ++ LCK G++ A E F K K+L S
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515
Query: 105 -----------------------WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
+P++ +YN L++G F+S+ + + EM +T
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
PN+VTYG L++G+C+ +D+A EM + G+ N I+ +T++ GL GR +E + +
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
M++ + P + +K + ++ + L LP+ YN K
Sbjct: 636 MQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 692
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
GKV+DA + + G+ PD TY L+ +D A ++ EM RG ++ T
Sbjct: 693 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 752
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL----- 376
LI+ LC+ D A F + ++GL P+ +T+ L D + K G A KL
Sbjct: 753 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 812
Query: 377 ---------CNVMSSV 383
CN++ SV
Sbjct: 813 EEGISPSIQCNLLESV 828
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 133/284 (46%), Gaps = 4/284 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ LLD C++G SE F+ K L + PTV YN LL G R DA + W
Sbjct: 371 YNTLLDGYCREGH---TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 427
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M K V P+ V Y TL++G ++ + A L K++ G + I +NT+I GL + G
Sbjct: 428 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 487
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E + ++ P +TY +L+ GYCKA ++ A K+ M PS YN
Sbjct: 488 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYN 547
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K ++ + +L +M G TP+ +TY L+ CKE LD A EM
Sbjct: 548 SLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTEN 607
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
G ++ + ++ L R+ + DEA+ + M+ G P + F
Sbjct: 608 GLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF 651
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 3/278 (1%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+++PTV ++++L + K+A + M K P++ + +L+ + A
Sbjct: 119 AFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 176
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ ++M + GI P+ + + +++ + G+ +E +G +++ P +VTY SL+ G
Sbjct: 177 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 236
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTP 282
Y GD+E A +LK M +G + TY + + K K+++A + R M E+ P
Sbjct: 237 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 296
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D Y +L+ C+ K+D A+++ EM G +L LI+ C+ + EA
Sbjct: 297 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
M+ L P ++ L D + + G T+ A LC+ M
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 394
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ R F SPT ++ + + + G ++A+ ++ M + G P + + LL L K +
Sbjct: 114 VYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGET 173
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A V ++M G D+ +++++ C+ K DEA+ + M G+ P+ +T+ L
Sbjct: 174 HTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSL 233
Query: 361 NDEFKKRGMTALAQKLCNVMS 381
+ + G A+ + MS
Sbjct: 234 INGYVSLGDVEAAKGVLKFMS 254
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 183/380 (48%), Gaps = 11/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ VL + ++F+S ++ +G ++ +TF I I+ +A A + A+ FE
Sbjct: 275 MMSVLGRTRQFES----MMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMK 330
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NFD+G LLD+L GR K E ++L+ + P +R Y +LLNGW
Sbjct: 331 RY----NFDAGVDTINCLLDNL---GRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWC 383
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R KN+ +A R W EM + P+++ + T++EG + ++ AI+L + M+ +G PN
Sbjct: 384 RIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVR 443
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I L + + +E + + P YT L+ G+ ++ +LK M
Sbjct: 444 TYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEM 503
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G TYN + + +DA+ +Y+KMI++G TY++++K
Sbjct: 504 KEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNY 563
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ V +EM +GC D ++ + I L R + +EA E+MI +G+ L + +
Sbjct: 564 EMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKF 623
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+F + G + ++L M
Sbjct: 624 AADFSRAGKPDILEELARKM 643
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 43/220 (19%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM----ERFLVCEPGPTMVTYTSLVKGYCK 226
+K G N+ YN ++ L +FE + GM+ E+ L+ TM T++ +K +
Sbjct: 261 QKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-----TMETFSIAIKAFAA 315
Query: 227 AGDLEGASKILKMM----------------------------------ISRGFLPSPTTY 252
A + + A + ++M + F P+ TY
Sbjct: 316 AKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTY 375
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ + + +A + +MI+ G+ PD + +H +L+ L K K AI++ + MK
Sbjct: 376 TVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKA 435
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+G ++ T T+LI LC+ K EA F++M+ G P
Sbjct: 436 KGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQP 475
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 173/335 (51%), Gaps = 13/335 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTF-EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI +G ++ A + E A N ++ +L+ + GR++ E
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAEN-----GVSPDVVVYNTMLNGYLRAGRIEECLE 321
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ K +++ TV YNIL+ G F + V +A W + +++ + +TYG LV G
Sbjct: 322 LW---KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 378
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG 211
C+ +++A+ +++E + + Y+++I+GL GR +EV+G++++ C+P
Sbjct: 379 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 438
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + +++ G+ +A LE A + M+S+G P+ TYN SK + +A L
Sbjct: 439 PYVC--NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 496
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++M++ G+ P+ +TY +L+ LC+ KLD+A+ + + +G D+ ++IH LC
Sbjct: 497 VKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCS 556
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
K ++A + +M +R VP+ +T L + F K
Sbjct: 557 SGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYK 591
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 15/369 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK+ + K+FD A LL G PD S T LI A+ G + A+ F+
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGT---LINSLAKNGYMSDALKLFDEMP 186
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + IL+D K+G + ASE + +R S P + YN+++NG
Sbjct: 187 E----RGVTPDVACYNILIDGFFKKGDILNASEIW-ERLLKGPSVYPNIPSYNVMINGLC 241
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ W M+K ++ TY TL+ G C +D A R+ KEM + G+ P+ +
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 301
Query: 181 VYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
VYNT+++G + AGR E E+ +ME+ E T+V+Y L++G + ++ A I
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEK----EGCRTVVSYNILIRGLFENAKVDEAISIW 357
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ + TY K G + A+++ + D Y ++ LC+E
Sbjct: 358 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 417
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+LD V +M GC + +I+ R K ++A F +M+ +G P +T+
Sbjct: 418 GRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 477
Query: 358 KRLNDEFKK 366
L + K
Sbjct: 478 NTLINGLSK 486
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 150/330 (45%), Gaps = 14/330 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA--- 91
++ ILIR V+ AI +E D + + + +L+ LCK G + A
Sbjct: 336 SYNILIRGLFENAKVDEAISIWELLPEKDCCAD----SMTYGVLVHGLCKNGYLNKALSI 391
Query: 92 -SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E + R +LD Y+ ++NG R + + +M K PN +
Sbjct: 392 LEEAENGRGDLD------TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAV 445
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G+ R +++ A+R M +G P + YNT+I+GL +A RF E +++ L
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGW 505
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P M+TY+ L+ G C+ L+ A + + +GF P +N GKVEDA+
Sbjct: 506 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 565
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
LY +M + P+ +T++ L++ K + A ++ + G D+ + + + LC
Sbjct: 566 LYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLC 625
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ +A D + RG++P +T+ L
Sbjct: 626 SCHRISDAVGFLNDAVDRGVLPTAITWNIL 655
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 156/343 (45%), Gaps = 42/343 (12%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
++ YA+ M + A+ F+ + + G + LL++L + + A +F
Sbjct: 58 LVAHAYAKNSMPDQALDIFQ---RMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 114
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ + S P ++ YNIL+ R K A+ M + +P+V +YGTL+ +
Sbjct: 115 FETMGLS--PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKN 172
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL----------- 206
+ A++L EM + G+ P+ YN +IDG + G S + ER L
Sbjct: 173 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 232
Query: 207 -------VC------------------EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
+C E G + TY++L+ G C +G+L+GA+++ K M
Sbjct: 233 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 292
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G P YN + + G++E+ + L++ M + G ++Y+IL++ L + K+D
Sbjct: 293 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVD 351
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
AI + + + + C D T +L+H LC+ ++A + E+
Sbjct: 352 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 394
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 141/327 (43%), Gaps = 57/327 (17%)
Query: 6 AKAKEFDSAWCLLLDKIGGHEVPDFVSKD-TFVILIRRYARAGMVEAAIWTFEFANNLDM 64
AK E S W LL +K D + T+ +L+ + G + A+ E A N
Sbjct: 348 AKVDEAISIWELLPEK-------DCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN--- 397
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
D + +++ LC++GR+ + + + P V N ++NG+ R+
Sbjct: 398 -GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK--HGCKPNPYVCNAVINGFVRASK 454
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY-- 182
++DA RF+ M + P VVTY TL+ G + R A LVKEM ++G +PN I Y
Sbjct: 455 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSL 514
Query: 183 ---------------------------------NTVIDGLVEAGRFEEV----SGMMERF 205
N +I GL +G+ E+ S M +R
Sbjct: 515 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRN 574
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
V P +VT+ +L++G+ K D E ASKI ++ G P +YN + ++
Sbjct: 575 CV----PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRI 630
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLK 292
DA+ ++ G P +T++IL++
Sbjct: 631 SDAVGFLNDAVDRGVLPTAITWNILVQ 657
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +R YN LLN S +AE F+L ++PN+ TY L++ CR ++ D+A L
Sbjct: 87 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 146
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M +G P+ Y T+I+ L + G + + + P + Y L+ G+ K
Sbjct: 147 LNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 206
Query: 227 AGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
GD+ AS+I +++ P+ +YN K GK +++ ++ +M ++ D
Sbjct: 207 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 266
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ LC LD A +V KEM G D+ +++ R + +E ++ M
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326
Query: 346 IRRG 349
+ G
Sbjct: 327 EKEG 330
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LC+ ++ A + + L++ + P V+++NI+++G S V+DA + + E
Sbjct: 512 YSLLMNGLCQGKKLDMALNLWCQ--ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 569
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M++ N PN+VT+ TL+EG+ ++R +RA ++ + + G++P+ I YN + GL R
Sbjct: 570 MKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHR 629
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ G + + PT +T+ LV+GY
Sbjct: 630 ISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 37/268 (13%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
+ Y + D+A+ + + M + G +P YN++++ L+E+ +++E F
Sbjct: 59 VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 118
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + TY L+K C+ + A ++L M +GF P +Y +K G + DA
Sbjct: 119 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDA 178
Query: 269 MNLYRKMIESGYTPD-------------------------RL-----------TYHILLK 292
+ L+ +M E G TPD RL +Y++++
Sbjct: 179 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 238
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LCK K D + ++ MK DL T + LIH LC D A+ +++M G+ P
Sbjct: 239 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 298
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + + + + + G +L VM
Sbjct: 299 DVVVYNTMLNGYLRAGRIEECLELWKVM 326
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KA+ F A+ L+ + + P+ + T+ +L+ + ++ A+ + A
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMI---TYSLLMNGLCQGKKLDMALNLWCQA- 535
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F + I++ LC G+V+ A + + + K+ ++ P + +N L+ G++
Sbjct: 536 ---LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ--RNCVPNLVTHNTLMEGFY 590
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ + A + W + + + P++++Y ++G C R+ A+ + + G+ P AI
Sbjct: 591 KVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAI 650
Query: 181 VYNTVIDG-LVEAGRFEEV 198
+N ++ G L G E V
Sbjct: 651 TWNILVQGYLALKGYMEPV 669
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 167/357 (46%), Gaps = 17/357 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-FEILLDSLCKQ 85
PDF+ T ILI Y V+ F A +M++ S ++ F L+ LC
Sbjct: 124 APDFI---TLNILINCYCNLNKVD-----FGLAVLGEMLRRGHSPNTVTFTSLVKGLCLG 175
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN------ 139
R+ A+ RK + + P V Y LLNG + N A + EM N
Sbjct: 176 SRISEATGLL--RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVT 233
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
+ PN+V Y T+++ C+ +D+ L EM+ GI P+ + Y+++I G+ GR+E
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
G+ + P +VT+ L+ CKAG +E A+ +LK+MI RG P TYN F
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
G+++DA +L+ M G D ++Y++L+ CK ++ A ++ +EM C+ +
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T L+ L R K +A F +M L P T+ L D K + A +L
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 43/330 (13%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++DSLCK G + E F + K + +P V Y+ +++G + + A+ + EM
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMK--GRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD 301
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
E V PNVVT+ L++ C+ +++ A L+K M + G P+ YNT+IDG GR ++
Sbjct: 302 EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDD 361
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ V+Y L+ GYCK+G + A K+ + M+ + +P+ TYN
Sbjct: 362 ARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLT 421
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA-------------- 303
+ GKV DA NL+ +M TP+ TY+ILL LCK + L A
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481
Query: 304 -----------------IQVSKEMKCR----GCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
I++++E+ R G + ++ T T++IH LC+ + + A F
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541
Query: 343 EDMIRRGLVPHYLTFKRL------NDEFKK 366
M +G P+ +TF L NDE +K
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQK 571
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 163/369 (44%), Gaps = 15/369 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K D L L+ G PD V+ + + GM W E A
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSII--------HGMCHTGRW--EGAK 293
Query: 61 NL--DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L +MV + F +L+D+LCK G+++ A+ + + + +P YN L++
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLL--KLMIQRGESPDTFTYNTLID 351
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ + DA ++ M + + + V+Y L+ GYC+ R+ A +L +EM + I P
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP 411
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
I YNT++ GL G+ + + V + P TY L+ G CK L A ++
Sbjct: 412 TVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELF 471
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + F PS +N K K+E A L+ ++ G P+ +TY +++ LCK
Sbjct: 472 HYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKS 531
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+L+ A + M+ +GC +L T L+ C+ + + ++M + P T
Sbjct: 532 GQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTI 591
Query: 358 KRLNDEFKK 366
+ D K
Sbjct: 592 SIVVDLLSK 600
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 152/305 (49%), Gaps = 10/305 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-FEILLDSLCKQGRVKAASE 93
TF +LI +AG +E A + M++ +S + + L+D C +GR+ A +
Sbjct: 310 TFNVLIDALCKAGKMEEANHLLKL-----MIQRGESPDTFTYNTLIDGFCLEGRIDDARD 364
Query: 94 YFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F ++ T V YN+L+NG+ +S + +A++ + EM + + P V+TY TL+
Sbjct: 365 LF---VSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLT 421
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G R +V A L EM+ + P + YN ++DGL + E + + P
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++ + L+ G CKA +E A ++ + G P+ TY K G++E+A +L+
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M E G P+ +T++ L++ C+ D++ +++ +EM + D T ++++ LL +
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKD 601
Query: 333 YKFDE 337
K+ E
Sbjct: 602 EKYRE 606
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 145/326 (44%), Gaps = 7/326 (2%)
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
D V N L E L S CK G +K + + +D P + +N LL +
Sbjct: 47 DTVSNAPDRGQL-ENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKI 105
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
K D + M + P+ +T L+ YC L +VD + ++ EM + G PN + +
Sbjct: 106 KRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTF 165
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI- 241
+++ GL R E +G++ + + P +VTY +L+ G C G+ A K+ + M+
Sbjct: 166 TSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLN 225
Query: 242 -SRGF----LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ GF P+ Y K G ++ L+ +M G +PD + Y ++ +C
Sbjct: 226 GNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCH 285
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ + A + EM G ++ T +LI LC+ K +EA+ + MI+RG P T
Sbjct: 286 TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFT 345
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L D F G A+ L M S
Sbjct: 346 YNTLIDGFCLEGRIDDARDLFVSMES 371
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 52/320 (16%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA + + A LL I E PD + +T LI + G ++ A F
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNT---LIDGFCLEGRIDDARDLFVSME 370
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K ++ A + +L++ CK GR+ A + + R+ + + PTV YN LL G F
Sbjct: 371 S----KGIETDAVSYNVLINGYCKSGRMVEAKKLY--REMMCKEIMPTVITYNTLLTGLF 424
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTL------------------------------ 150
R V+DA + EM+ ++TP TY L
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484
Query: 151 -----VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS----GM 201
++G C+ R+++ A L + EG+EPN I Y +I GL ++G+ E GM
Sbjct: 485 IFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGM 544
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
E+ P +VT+ +L++G+C+ +++ ++L+ M + F P +T + SK
Sbjct: 545 EEKGCA----PNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600
Query: 262 FGKVEDAMNLYRKMIESGYT 281
K + ++L G T
Sbjct: 601 DEKYREYLHLLPTFPAQGQT 620
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query: 78 LLDSLCKQGRVKAASE----YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ ++C R AA ++ R +L + APTVRVYN LL+ R V +
Sbjct: 93 LVAAICAFARAGAADRALKTFYRARHDLGCA-APTVRVYNHLLDALLRENLVAAVVPVYD 151
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
MRK V PNV TY L++ C+ RV A R++ EM ++G P+ + + T+I L +
Sbjct: 152 NMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLD 211
Query: 194 RFEEVSG------------------------MMERFLVCEP------GPTMVTYTSLVKG 223
R +E G M E FLV + P V YTS+V
Sbjct: 212 RLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGA 271
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+CKA +L A IL M++ G +P+ T+ + F GKV DA+ ++ M+ G+ P
Sbjct: 272 FCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPS 331
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
++Y++L++ LC L A+ V M C D+ T + LI + D A + +
Sbjct: 332 TISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWN 391
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
DM G P+ + + + D K+ M A+ L + MS
Sbjct: 392 DMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMS 429
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 15/363 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ KA+E A +L + VP+ TF +L++ + G V A+ +
Sbjct: 268 IVGAFCKARELRMACAILARMVTEGCVPNV---QTFTVLVKGFFDDGKVHDALGMW---- 320
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + + + +L+ LC G +K A F + D P VR Y+ L++G+
Sbjct: 321 NWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD--CLPDVRTYSTLIDGFS 378
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ ++ A W +M PNVV Y +V+ C+ D+A L+ +M E PN +
Sbjct: 379 KAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTL 438
Query: 181 VYNTVIDGLVE---AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+NT+I L + AGR V M R+ C P TY L+ G + G+ E A ++L
Sbjct: 439 TFNTLIRSLCDLGRAGRALNVFHGMRRY-GCPPNDR--TYNELLHGLFREGNCEDALRML 495
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M++ GF S +YN + +++AM L +MI G PD T++ ++ CKE
Sbjct: 496 TEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKE 555
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ A + M C ++ T L+ LC +K D+A M+ G+ P+ T+
Sbjct: 556 GNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATW 615
Query: 358 KRL 360
L
Sbjct: 616 NVL 618
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 4/315 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ + CK ++ A + + + P V+ + +L+ G+F V DA W
Sbjct: 265 YTSIVGAFCKARELRMACAILARM--VTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNW 322
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E P+ ++Y L+ G C + + RA+ + M K P+ Y+T+IDG +AG
Sbjct: 323 MVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGD 382
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + P +V YT++V CK + A ++ M P+ T+N
Sbjct: 383 LDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNT 442
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R G+ A+N++ M G P+ TY+ LL L +E + A+++ EM G
Sbjct: 443 LIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHG 502
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ L + I LC+M EA MI +G+ P TF + + K G A
Sbjct: 503 FELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAA 562
Query: 375 KLCNVMSSV--PRSM 387
+ M +V PR++
Sbjct: 563 WMLGRMDAVNCPRNI 577
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 11/285 (3%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL--EM 135
++ +LCK R+ A + + S+ V L G FR + V F + EM
Sbjct: 203 IISALCKLDRLDEARGILAEMTPVGASYNAVVHA----LCGQFRMREV-----FLVVDEM 253
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ P+ V Y ++V +C+ R + A ++ M EG PN + ++ G + G+
Sbjct: 254 VHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKV 313
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ GM + P+ ++Y L++G C GDL+ A + M LP TY+
Sbjct: 314 HDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTL 373
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
FSK G ++ AM+++ M +G P+ + Y ++ +LCK+ D A + +M C
Sbjct: 374 IDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENC 433
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T LI LC + + A F M R G P+ T+ L
Sbjct: 434 PPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNEL 478
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 56 FEFANNLD---MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVY 112
F+ A NL ++N F L+ SLC GR A FH + P R Y
Sbjct: 418 FDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRY--GCPPNDRTY 475
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N LL+G FR N +DA R EM ++V+Y T + G C++R + A+ L+ M
Sbjct: 476 NELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMII 535
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+GI+P+A +N +I + G + M+ R +V YTSL+ G C L+
Sbjct: 536 QGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDD 595
Query: 233 ASKILKMMISRGFLPSPTTYNYFFR-YFSKFGKVEDAMNLYRKMIE 277
A L M+ G P+ T+N R F+ G + M+L +IE
Sbjct: 596 AMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTI-GPMHLIDHIIE 640
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGF------------------------------ 245
+ + V+ AGDL+G L+ M RG
Sbjct: 57 AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA 116
Query: 246 -------LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
P+ YN+ + V + +Y M ++G P+ TY++L+K LC+ D
Sbjct: 117 RHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQND 176
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ A ++ EM +GC D + T +I LC++ + DEA +M G
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG 227
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 17/363 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K A+ L + I P V TF LI + G + A F
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV---TFSSLIYGFCIVGKFKDAFRLF---- 251
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N ++KN + A F IL+D+LCK+G++K A + + PTV YN L++G+
Sbjct: 252 NEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVM--MKEGVEPTVVTYNTLMDGYC 309
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V A+ + + V PN +Y ++ G+C+++ VD A+ L EM GI P+ +
Sbjct: 310 LVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKV 369
Query: 181 VYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
YN++IDGL +AGR +E V M C P +VTY SL+ +CK ++ A +
Sbjct: 370 TYNSLIDGLCKAGRIPYAWELVDEMHNN---CIPA-DIVTYNSLIDVFCKNQHVDKAIAL 425
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+K + G P+ TYN K G++++A ++++ ++ GY + TY+I++ LCK
Sbjct: 426 VKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCK 485
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E D A + +M+ G D T +I L + ++A +M+ +G+V +
Sbjct: 486 EGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFE 545
Query: 357 FKR 359
+R
Sbjct: 546 IRR 548
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 154/301 (51%), Gaps = 4/301 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWL 133
+ IL++ LCK G+ +AA + ++++ T V +Y+ +++G + K V DA +
Sbjct: 161 YGILINGLCKMGQTRAALQVL---RQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYS 217
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + P VVT+ +L+ G+C + + A RL EM + I P+A +N ++D L + G
Sbjct: 218 EMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEG 277
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ +E ++ + PT+VTY +L+ GYC ++ A +L ++ P+ +YN
Sbjct: 278 KIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYN 337
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F K V++A+ L+ +M G P ++TY+ L+ LCK ++ A ++ EM
Sbjct: 338 IMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNN 397
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D+ T LI + C+ D+A A + + G+ P+ T+ L D K G A
Sbjct: 398 CIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNA 457
Query: 374 Q 374
Q
Sbjct: 458 Q 458
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 2/317 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+VK F L+ C G+ K A F++ + ++ P +NIL++ +
Sbjct: 220 IVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEM--VMKNINPDAYTFNILVDALCKEG 277
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+K+A+ M KE V P VVTY TL++GYC + V +A ++ + + + PN+ YN
Sbjct: 278 KIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYN 337
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I+G + +E + P VTY SL+ G CKAG + A +++ M +
Sbjct: 338 IMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNN 397
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
TYN F K V+ A+ L +K+ E G P+ TY+IL+ LCK +L A
Sbjct: 398 CIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNA 457
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
V +++ +G +++ T ++I+ LC+ FDEA M G++P +T++ +
Sbjct: 458 QDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQA 517
Query: 364 FKKRGMTALAQKLCNVM 380
+ AQKL M
Sbjct: 518 LFHKDENEKAQKLLREM 534
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 153/328 (46%), Gaps = 22/328 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ C G++ A F K IL G + V +A F
Sbjct: 105 LSILINCYCHLGQMTFAFSVFAK----------------ILKMGLCLNGKVNEALLFHDH 148
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ N VTYG L+ G C++ + A+++++++ + + N ++Y+T+IDGL +
Sbjct: 149 VLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKL 208
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ G+ +V PT+VT++SL+ G+C G + A ++ M+ + P T+N
Sbjct: 209 VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNI 268
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GK+++A N+ M++ G P +TY+ L+ C +++ A V +
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR 328
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + ++I+ C++ DEA F +M RG+ PH +T+ L D K G A
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388
Query: 375 KLCNVMSS--VPRSM----ELLDSRCKD 396
+L + M + +P + L+D CK+
Sbjct: 389 ELVDEMHNNCIPADIVTYNSLIDVFCKN 416
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 187/372 (50%), Gaps = 22/372 (5%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
MI L K +FD + W + G ++ T+ LI +G ++ A ++
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDL------YTYSTLIHGLCGSGNLDGATRVYK 314
Query: 58 FANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+M +N ++ +L+ + GR++ E + K +++ TV YNIL+
Sbjct: 315 -----EMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW---KVMEKEGCRTVVSYNILI 366
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G F + V +A W + +++ + +TYG LV G C+ +++A+ +++E +
Sbjct: 367 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGD 426
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ Y+++I+GL GR +EV+G++++ C+P P + +++ G+ +A LE A
Sbjct: 427 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC--NAVINGFVRASKLEDAL 484
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ M+S+G P+ TYN SK + +A L ++M+ G+ P+ +TY +L+ L
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C+ KLD+A+ + + +G D+ ++IH LC K ++A + +M +R VP+
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604
Query: 355 LTFKRLNDEFKK 366
+T L + F K
Sbjct: 605 VTHNTLMEGFYK 616
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 15/369 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK+ + K+FD A LL PD S T LI A+ G + A+ F+
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGT---LINSLAKNGYMSDALKLFDEMP 211
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + + IL+D K+G + ASE + +R S P + YN+++NG
Sbjct: 212 ERGVTPD----VACYNILIDGFFKKGDILNASEIW-ERLLKGPSVYPNIPSYNVMINGLC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ W M+K ++ TY TL+ G C +D A R+ KEM + G+ P+ +
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326
Query: 181 VYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
VYNT+++G + AGR E E+ +ME+ E T+V+Y L++G + ++ A I
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEK----EGCRTVVSYNILIRGLFENAKVDEAISIW 382
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ + TY K G + A+++ + D Y ++ LC+E
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 442
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+LD V +M GC + +I+ R K ++A F +M+ +G P +T+
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502
Query: 358 KRLNDEFKK 366
L + K
Sbjct: 503 NTLINGLSK 511
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +R YN LLN S +AE F+L ++PN+ TY L++ CR ++ D+A L
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 171
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M ++G P+ Y T+I+ L + G + + + P + Y L+ G+ K
Sbjct: 172 LNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 231
Query: 227 AGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
GD+ AS+I +++ P+ +YN K GK +++ ++ +M ++ D
Sbjct: 232 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ LC LD A +V KEM G D+ +++ R + +E ++ M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351
Query: 346 IRRG 349
+ G
Sbjct: 352 EKEG 355
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 14/274 (5%)
Query: 6 AKAKEFDSAWCLLLDKIGGHEVPDFVSKD-TFVILIRRYARAGMVEAAIWTFEFANNLDM 64
AK E S W LL +K D + T+ +L+ + G + A+ E A N
Sbjct: 373 AKVDEAISIWELLPEK-------DCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN--- 422
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
D + +++ LC++GR+ + + + P V N ++NG+ R+
Sbjct: 423 -GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK--HGCKPNPHVCNAVINGFVRASK 479
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
++DA RF+ M + P VVTY TL+ G + R A LVKEM +G +PN I Y+
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+++GL + + + + + L P + + ++ G C +G +E A ++ M R
Sbjct: 540 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+P+ T+N F K E A ++ +++S
Sbjct: 600 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 37/314 (11%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
++ T V++ +L F K V R +R + T+++ Y + D+A
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97
Query: 164 IRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+ + + M + G +P YN++++ L+E+ +++E F P + TY L+K
Sbjct: 98 LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
C+ + A ++L M +GF P +Y +K G + DA+ L+ +M E G TP
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217
Query: 283 D-------------------------RL-----------TYHILLKILCKEDKLDLAIQV 306
D RL +Y++++ LCK K D + ++
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
MK DL T + LIH LC D A+ +++M G+ P + + + + + +
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337
Query: 367 RGMTALAQKLCNVM 380
G +L VM
Sbjct: 338 AGRIEECLELWKVM 351
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 12/235 (5%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAG 228
R G V++ ++ L + VS ++E R C+ P V T ++K Y K
Sbjct: 35 RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCK-CPEDVALT-VIKAYAKNS 92
Query: 229 DLEGASKILKMMISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
+ A I + M G P +YN + K ++A + + G +P+ TY
Sbjct: 93 MPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTY 152
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+IL+KI C++ + D A ++ M +G D+ + LI+ L + +A F++M
Sbjct: 153 NILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLC-------NVMSSVPRSMELLDSRCK 395
RG+ P + L D F K+G A ++ +V ++P +++ CK
Sbjct: 213 RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 267
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 135/246 (54%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P R Y +L+NG+ + ++ AE +M+ + V N + + T+++GYCR VD A+++
Sbjct: 106 PNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI 165
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M K G+E + YNT+ GL R +E ++ + P VTYT+L+ +CK
Sbjct: 166 KAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCK 225
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD+ A ++ + M +G PS TYN ++K G + +A ++M + G+ PD T
Sbjct: 226 DGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYT 285
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ C K+D+A+++ +EMK RG + ++ T LI L + + + A ++DM+
Sbjct: 286 YASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDML 345
Query: 347 RRGLVP 352
+ GL+P
Sbjct: 346 KAGLIP 351
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 154/331 (46%), Gaps = 40/331 (12%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV----YNILLNGWFRSKNVKDAERFW 132
+++D LCK GRV A R+ LD V + YN LL+ + R K+ +
Sbjct: 19 VVVDGLCKSGRVDDA------RRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 72
Query: 133 LEMRKEN------------------------VTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
M E V PN TYG L+ G+C++ +++ A L+
Sbjct: 73 EIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 132
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+M+ +G+ N I++NT+IDG G ++ + ME+ V + TY +L G C
Sbjct: 133 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV---ELDIYTYNTLACGLC 189
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ L+ A +L +MI G +P+ TY K G + +A L+R+M E G TP +
Sbjct: 190 RVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVV 249
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY++++ K+ + A + KEM+ +G D+ T L+H C K D A FE+M
Sbjct: 250 TYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEM 309
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+RG P+ + + L K G + A +L
Sbjct: 310 KQRGTEPNVVAYTALISGLAKEGRSEAAFQL 340
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 26/281 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG------RV 88
T+ +LI + + G +EAA + N +F ++D C++G ++
Sbjct: 110 TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLN----QIIFNTMIDGYCRKGMVDDALKI 165
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
KAA E ELD + YN L G R + +A+ M + V PN VTY
Sbjct: 166 KAAMEKMGV--ELD------IYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYT 217
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-- 206
TL+ +C+ + A RL +EM ++G P+ + YN +I G + G E ERF
Sbjct: 218 TLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREA----ERFRKE 273
Query: 207 VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ + G P + TY SLV G+C G ++ A K+ + M RG P+ Y +K G+
Sbjct: 274 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 333
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
E A LY M+++G PD Y L+ L +++ D+ +
Sbjct: 334 SEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 374
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 36/252 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
+I K + ++A LL D + G V +++ F +I Y R GMV+ A
Sbjct: 114 LINGFCKIGQMEAAEMLLAD-MQGQGVG--LNQIIFNTMIDGYCRKGMVDDALKIKAAME 170
Query: 53 -------IWTFE-FANNLDMVKNFDSGASLFEILLDS---------------LCKQGRVK 89
I+T+ A L V D +L I+++ CK G +
Sbjct: 171 KMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMV 230
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A F R+ ++ P+V YN++++G+ + ++++AERF EM K+ P+V TY +
Sbjct: 231 EARRLF--REMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYAS 288
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
LV G+C +VD A++L +EM++ G EPN + Y +I GL + GR E + + L
Sbjct: 289 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 348
Query: 210 PGPTMVTYTSLV 221
P Y++LV
Sbjct: 349 LIPDDSLYSALV 360
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 19/241 (7%)
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV---EAGRF 195
+V+P + +V+G C+ RVD A RL+ +M + G+ NA+ YN+++D V + GR
Sbjct: 11 SVSP--LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRV 68
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E+ +ME ++ G G K+L + G P+ TY
Sbjct: 69 QEILEIME--------------NEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVL 114
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K G++E A L M G +++ ++ ++ C++ +D A+++ M+ G
Sbjct: 115 INGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV 174
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++D+ T L LCR+ + DEA MI G+VP+Y+T+ L K G A++
Sbjct: 175 ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARR 234
Query: 376 L 376
L
Sbjct: 235 L 235
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 194/398 (48%), Gaps = 18/398 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ VL K + FD W L++++ +E V+ DT ++RR A++G A+ F
Sbjct: 172 MVDVLGKCRNFDLMW-ELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF---- 226
Query: 61 NLDMVKNFDSGASLFEI--LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L+M K++ + L+D+L K+ ++ A E F K L + P R +NIL++G
Sbjct: 227 -LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK---LFDTIKPDARTFNILIHG 282
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +++ DA M+ TP+VVTY + VE YC+ R +++EMR+ G PN
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y V+ L ++ + E G+ E+ P Y+SL+ K G + A++I +
Sbjct: 343 VVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES---GYTPDRLTYHILLKILC 295
M ++G YN + E A+ L ++M + +P+ TY LLK+ C
Sbjct: 403 DMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCC 462
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ K+ L + M ID+ T +LI LC K +EA FE+ +R+G+VP
Sbjct: 463 HKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDS 522
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSR 393
T K L DE +K+ M K+ S+ +S ++DS
Sbjct: 523 TCKMLVDELEKKNMAEAKLKI----QSLVQSKTMIDSH 556
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 163/344 (47%), Gaps = 7/344 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L+ + R V+ A+ F + + FDS + F IL+ LC+ G+V A E F++
Sbjct: 208 LLNQLVRGNQVDEAVCFFR--EQMGLHGPFDSCS--FNILIRGLCRIGKVDKAFELFNEM 263
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVTPNVVTYGTLVEGYCRL 157
+ S P V YN L+NG+ R V E+ K +++P+VVTY +++ GYC+L
Sbjct: 264 RGFGCS--PDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKL 321
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
++++A L M GI+PNA +N +I+G + G M E L+ P ++T+
Sbjct: 322 GKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITF 381
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
TSL+ G+C+ G +E + K+ + +R P+ T+ K ++ +A R +
Sbjct: 382 TSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKW 441
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
Y+ ++ CK +D A + EM+ + C D T T+LI C + E
Sbjct: 442 RHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSE 501
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
A + F M+ G P +T L K GM A ++ + S
Sbjct: 502 AISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIAS 545
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 20/290 (6%)
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + ++ + + R Y+ LL + A+ + M + +P+ G LV
Sbjct: 123 FFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSA 182
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------FEEVSGMMERFLV 207
+ + A V +G+E + +VYN +++ LV + F E G+ F
Sbjct: 183 TDAGKFNIARTWV-----DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDS 237
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
C ++ L++G C+ G ++ A ++ M G P TYN F + +V+
Sbjct: 238 C-------SFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDR 290
Query: 268 AMNLYRKMI-ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+L ++++ ++ +PD +TY ++ CK K++ A + M G + T +LI
Sbjct: 291 GHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILI 350
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ ++ A +E+M+ G P +TF L D + G + KL
Sbjct: 351 NGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKL 400
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
S YN + +V++A+ +R+ + D +++IL++ LC+ K+D A ++
Sbjct: 201 SLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELF 260
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRLNDEFKK 366
EM+ GC D+ T LI+ CR+ + D ++++ + L P +T+ + + K
Sbjct: 261 NEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCK 320
Query: 367 RGMTALAQKLCNVMSS 382
G A L N M S
Sbjct: 321 LGKMEKASILFNNMIS 336
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 172/369 (46%), Gaps = 9/369 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L + + FDS W I VPD + +L + + G+ + +L +
Sbjct: 174 LVRRRRFDSVWVDYQLMISRGLVPDV---HIYFVLFQCCFKQGLYSKKEKLLDEMTSLGI 230
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
N ++ I + LC+ +++ A + F K+ P + Y+ +++G+ ++ N
Sbjct: 231 KPN----VYIYTIYILDLCRDNKMEEAEKMFELMKK--HGVLPNLYTYSAMIDGYCKTGN 284
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V+ A + E+ + PNVV +GTLV+G+C+ R + A L M K G++PN VYN
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G ++G E G++ P + TYT L+ G C + A+++ + M +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS TYN + K +E A++L +M SG P+ +T+ L+ C + A+
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ EM +G D+ T T LI + EA + DM+ G+ P+ TF L D F
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 365 KKRGMTALA 373
K G ++A
Sbjct: 525 WKEGRLSVA 533
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 176/421 (41%), Gaps = 58/421 (13%)
Query: 1 MIKVLAKAKEFDSAWCL---LLDKIGGHEVPDFVSK----------------DTFVILIR 41
+I VL A ++ A CL L++++ H P +S F +LI
Sbjct: 81 VIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIM 140
Query: 42 RYARAGMVEAAIWT-------------FEFANNLDMVKNFDS---------------GAS 73
+ G+ E A+W N L + FDS
Sbjct: 141 EFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA----PTVRVYNILLNGWFRSKNVKDAE 129
++ +L KQG Y K K LD+ + P V +Y I + R +++AE
Sbjct: 201 IYFVLFQCCFKQGL------YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAE 254
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ + M+K V PN+ TY +++GYC+ V +A L KE+ + PN +V+ T++DG
Sbjct: 255 KMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGF 314
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+A + + P + Y L+ G+CK+G++ A +L M S P
Sbjct: 315 CKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY +V +A L++KM P TY+ L+ CKE ++ A+ + E
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND-EFKKRG 368
M G + ++ T + LI C + A + +M +G+VP +T+ L D FK+
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 369 M 369
M
Sbjct: 495 M 495
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 8/324 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR-VKAASE 93
T+ +I Y + G V A ++ +++ N +F L+D CK V A S
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN----VVVFGTLVDGFCKARELVTARSL 326
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ H K P + VYN L++G +S N+ +A EM N++P+V TY L+ G
Sbjct: 327 FVHMVK---FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C +V A RL ++M+ E I P++ YN++I G + E+ + P
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++T+++L+ GYC D++ A + M +G +P TY K +++A+ LY
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M+E+G P+ T+ L+ KE +L +AI +E + + T LI LC+
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 334 KFDEASAEFEDMIRRGLVPHYLTF 357
AS F DM G+ P ++
Sbjct: 564 YILRASRFFSDMRSCGITPDICSY 587
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 133/340 (39%), Gaps = 83/340 (24%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTFEF 58
++ KA+E +A L + H V V + +V LI + ++G + A+
Sbjct: 310 LVDGFCKARELVTARSLFV-----HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+L N + IL++ LC + +V A+ F K K ++ P+ YN L++G
Sbjct: 365 MESL----NLSPDVFTYTILINGLCIEDQVAEANRLFQKMK--NERIFPSSATYNSLIHG 418
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD----------------- 161
+ + N++ A EM V PN++T+ TL++GYC +R +
Sbjct: 419 YCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Query: 162 ------------------RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------FE 196
A+RL +M + GI PN + ++DG + GR ++
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Query: 197 E----------------VSGMME--------RFLV----CEPGPTMVTYTSLVKGYCKAG 228
E + G+ + RF C P + +Y S++KG+ +
Sbjct: 539 ENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+ + MI G LP+ R++ G V+ A
Sbjct: 599 RITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 2/288 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC +GR A L + P V Y ILL + K A + E
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDM--LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDE 216
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P+++TY +V G C+ RVD AI +K + G EPN + YN V+ GL A R
Sbjct: 217 MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E+ +M P +VT+ L+ C+ G +E A ++L + G P+ +YN
Sbjct: 277 WEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP 336
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K K++ AM M+ G PD ++Y+ LL LC+ ++D A+++ ++K +G
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
C L + +I L + K EA +M+ +GL P +T+ ++
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISS 444
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 5/306 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ C G++ AA +R D P YN L+ G +A +
Sbjct: 127 YNAMVAGYCVTGQLDAA-----RRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDD 181
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVTY L+E C+ +A++L+ EMR +G P+ I YN V++G+ + GR
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ P V+Y ++KG C A E A K++ M +G+ P+ T+N
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + G VE AM + ++ + G TP+ L+Y+ +L CK+ K+D A+ + M RG
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ + L+ LCR + D A + +G P +++ + D K G T A
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 375 KLCNVM 380
+L N M
Sbjct: 422 ELLNEM 427
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 142/286 (49%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL++ CK+ K A + + + + AP + YN+++NG + V DA F
Sbjct: 194 YTILLEATCKRSGYKQAMKLLDEMRA--KGCAPDIITYNVVVNGICQEGRVDDAIEFLKS 251
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ PN V+Y +++G C R + A +L+ EM ++G PN + +N +I L G
Sbjct: 252 LPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGL 311
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++++ P ++Y ++ +CK ++ A +++M+SRG P +YN
Sbjct: 312 VEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNT 371
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G+V+ A+ L ++ + G TP ++Y+ ++ L K K A+++ EM +G
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ T + + LCR + +EA F + G+ P+ + + +
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAI 477
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 166/394 (42%), Gaps = 46/394 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYA-RAGMVEAAIWTFEFA 59
+I+ L +A +L D + VPD V T+ IL+ R+G +A E
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVV---TYTILLEATCKRSGYKQAMKLLDEM- 217
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
K + ++++ +C++GRV A E+ P YNI+L G
Sbjct: 218 ----RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLP--SHGCEPNTVSYNIVLKGL 271
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ +DAE+ EM ++ PNVVT+ L+ CR V+ A+ ++ ++ K G PN+
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN ++ + + + +E + P +V+Y +L+ C+ G+++ A ++L
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY------------ 287
+ +G P +YN +K GK ++A+ L +M+ G PD +TY
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDR 451
Query: 288 -----------------------HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+ +L LCK + AI + M GC + T T+
Sbjct: 452 IEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTI 511
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
LI L EA ++ RG+V L K
Sbjct: 512 LIEGLTYEGLVKEARELLGELCSRGVVSKGLINK 545
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 137/289 (47%), Gaps = 10/289 (3%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
L L ++G ++ A L+ S AP L+ S +A R
Sbjct: 66 LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCA--ALIKKLCASGRTAEARRVLAACE-- 121
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
P+V+ Y +V GYC ++D A RLV +M +EP++ YNT+I GL GR
Sbjct: 122 ---PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNA 175
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+++ L P +VTYT L++ CK + A K+L M ++G P TYN
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ G+V+DA+ + + G P+ ++Y+I+LK LC ++ + A ++ EM +G +
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPN 295
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ T MLI LCR + A + + + G P+ L++ + F K+
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQ 344
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 9/294 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L A+ ++ A L+ + P+ V TF +LI R G+VE A+ +
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVV---TFNMLISFLCRRGLVEPAMEVLDQIP 323
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N S + +L + CKQ ++ A + + + P + YN LL
Sbjct: 324 KYGCTPNSLS----YNPILHAFCKQKKMDRAMAFVELM--VSRGCYPDIVSYNTLLTALC 377
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R V A +++ + TP +++Y T+++G + + A+ L+ EM +G++P+ I
Sbjct: 378 RGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDII 437
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+T+ GL R EE + P V Y +++ G CK + A + M
Sbjct: 438 TYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYM 497
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
IS G +P+ +TY + G V++A L ++ G L +++L
Sbjct: 498 ISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLL 551
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 177 PNAI----VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--------------------- 211
PNA+ V N + GLV G EE ++E EP
Sbjct: 53 PNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAE 112
Query: 212 ---------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P ++ Y ++V GYC G L+ A +++ M P TYN R
Sbjct: 113 ARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGR 169
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+ +A+ + M+ G PD +TY ILL+ CK A+++ EM+ +GC D+ T
Sbjct: 170 GRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITY 229
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++++ +C+ + D+A + + G P+ +++
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYN 265
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 169/364 (46%), Gaps = 45/364 (12%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
++D V I +ARAG + A+ TF A++L D G ++ LLD+L ++ V A
Sbjct: 85 TEDALVAAIGAFARAGSADRALKTFYRASDLGC---RDPGVRVYNHLLDALLRENMVGAV 141
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ ++ P V YN+L+ ++ V A + EM ++ P+ V++GT+V
Sbjct: 142 VPVYDNMRKAGVD--PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIV 199
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G C+L RV+ A + E P YN V+ L R EV ++ +
Sbjct: 200 SGMCKLGRVEEARGFLAE-----TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQ 254
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VTYT++V +CKA +L A IL M+S G P+ T+ + F + GKV DA+++
Sbjct: 255 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 314
Query: 272 YRKMIESGYTPDRLTYHILLKILC-----------------------------------K 296
+ M++ G+ P ++Y++L++ LC
Sbjct: 315 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 374
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
LD A+ + EMK GC ++ T +I +LC+ FD+A + + M+ P+ +T
Sbjct: 375 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVT 434
Query: 357 FKRL 360
F L
Sbjct: 435 FNTL 438
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 11/361 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ KA+E A +L + P+ + TF L++ + G V A+ + +
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVL---TFTALVKGFFEDGKVHDALSMWHW-- 317
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV + +++ + +L+ LC G +K A ++F+ K + P Y+ L++G+
Sbjct: 318 ---MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR--NALLPNATTYSTLVDGF 372
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++ A W EM+ PNVV Y +++ C+ D+A L+ +M + PN
Sbjct: 373 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT 432
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +NT+I L + GR + P TY L+ G + G+ + A ++
Sbjct: 433 VTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIE 492
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++ GF S TYN + + AM L +M+ G PD T++ ++ CKE K
Sbjct: 493 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 552
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ +A + +M C ++ T+LI LC K A M+ G+ P+ T+
Sbjct: 553 VSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 612
Query: 360 L 360
L
Sbjct: 613 L 613
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 149/343 (43%), Gaps = 10/343 (2%)
Query: 40 IRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRK 99
+RR A AG V+ + + ++ + + + G A + F++
Sbjct: 58 VRRLAAAGDVDGVQYALQEMR----LRGVACTEDALVAAIGAFARAGSADRALKTFYRAS 113
Query: 100 ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR 159
+L P VRVYN LL+ R V + MRK V PNV TY L+ C+ R
Sbjct: 114 DLG-CRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDR 172
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
VD A +++ EM ++G P+ + + T++ G+ + GR EE G + E P +Y +
Sbjct: 173 VDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA-----ETVPVQASYNA 227
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+V C + ++ M+ RG P+ TY F K ++ A + +M+ G
Sbjct: 228 VVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG 287
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
TP+ LT+ L+K ++ K+ A+ + M G + +LI LC + A
Sbjct: 288 CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGAL 347
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
F M R L+P+ T+ L D F G A + N M S
Sbjct: 348 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKS 390
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 4/315 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D+ CK ++ A + + P V + L+ G+F V DA W
Sbjct: 260 YTTIVDAFCKARELRMACAILARM--VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHW 317
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E P+ ++Y L+ G C + + A+ M++ + PNA Y+T++DG AG
Sbjct: 318 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 377
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + P +V YT+++ CK + A ++ M+ P+ T+N
Sbjct: 378 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 437
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+V A+N++ M +G P+ TY+ LL L +E A + EM G
Sbjct: 438 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 497
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ L T +I+ LC+M A M+ +G+ P TF + + K G ++A
Sbjct: 498 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 557
Query: 375 KLCNVMSSV--PRSM 387
L M++V PR++
Sbjct: 558 CLLGQMNAVNCPRNV 572
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
++ N F L+ LC GRV A FH + P R YN LL+G FR
Sbjct: 424 LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR--NGCHPNDRTYNELLHGLFREG 481
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N KDA +EM ++VTY T++ C++ A+ L+ M +GI+P+A +N
Sbjct: 482 NHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFN 541
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I + G+ + ++ + +V YT L+ C G L A L M+
Sbjct: 542 AIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYE 601
Query: 244 GFLPSPTTYNYFFR-YFSKFGKVEDAMNLYRKMIE 277
G P+ T+N R F+ G + ++L++ ++E
Sbjct: 602 GICPNEATWNVLVRAIFTNIGTI-GPIHLFKYIVE 635
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 176/375 (46%), Gaps = 27/375 (7%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +F+ A+ ++ + + VPD T+ +I +A V+ A F+
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRKGFVPD---ASTYTKVITFLCQAKRVDKAFLLFQ----- 476
Query: 63 DMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+M K + + IL+DS CK G ++ A +F + + S P V Y LL+ + +
Sbjct: 477 EMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCS--PNVVTYTALLHAYLK 534
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM----------- 170
SK + A + M + PN +TY L++G C+ + +A + ++
Sbjct: 535 SKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDF 594
Query: 171 -----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+ I PN + Y +++GL +A + + +++ L P + Y +LV G+C
Sbjct: 595 YFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFC 654
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+++ A ++ M G+LPS TY K G+++ AM + +M++ P+ +
Sbjct: 655 KVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVV 714
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY ++ LCK + + A+ + M+ +GC ++ T T LI L + K D F M
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774
Query: 346 IRRGLVPHYLTFKRL 360
+G P+Y+T++ L
Sbjct: 775 KTKGCAPNYVTYRIL 789
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 31/392 (7%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L +AK D A+ L + K+G + PD T+ ILI + +AG++E A F+
Sbjct: 458 VITFLCQAKRVDKAFLLFQEMKKVGVN--PDVY---TYTILIDSFCKAGLIEQAQSWFDE 512
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ N + + LL + K ++ A++ FH+ + + P Y+ L++G
Sbjct: 513 MRSAGCSPNVVT----YTALLHAYLKSKQLYQANDIFHRM--VGDACYPNAITYSALIDG 566
Query: 119 WFRSKNVKDA---------------ERFWLEMR-KENVTPNVVTYGTLVEGYCRLRRVDR 162
++ ++ A F+ E + + ++PNVVTYG LV G C+ ++V
Sbjct: 567 LCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSD 626
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A L+ M G EPN IVY+ ++DG + G + + R C P++ TYTSL+
Sbjct: 627 AHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLID 686
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
K G L+ A K+L M+ P+ TY K G+ E A+NL M + G +P
Sbjct: 687 RMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSP 746
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ +TY L+ L K K+D +++ +MK +GC + T +LI+ C D+A
Sbjct: 747 NVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLL 806
Query: 343 EDMIRRGLVPHYLTFKRLNDE-FKKRGMTALA 373
++M ++ P YL R + F KR + +L
Sbjct: 807 DEM-KQTHWPKYLQGYRTTVQGFSKRFLASLG 837
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 146/307 (47%), Gaps = 7/307 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D CK G + +A E F + + + P+V Y L++ F+ + A +
Sbjct: 645 VYDALVDGFCKVGEIDSAQEVFLRMTKC--GYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K++ PNVVTY +V+G C+ ++A+ L+ M K+G PN + Y +IDGL +AG
Sbjct: 703 QMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + + P VTY L+ C AG L+ A +L M + Y
Sbjct: 763 KVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYR 822
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ FSK + ++ L +M P Y +L+ K +L+ A+++ KEM
Sbjct: 823 TTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEV 880
Query: 314 GCDIDL---DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+++ D T LI LC + +EA A + +M RRG+VP F L +R
Sbjct: 881 SSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKW 940
Query: 371 ALAQKLC 377
A +LC
Sbjct: 941 NEALQLC 947
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 175/424 (41%), Gaps = 37/424 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A F+ A L +P+ V+ T + + + G + I
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRII------- 329
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N+ M + + SLF L+ + C A + F++ P VYNI +
Sbjct: 330 NMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTC--GCPPGYVVYNIFIGSIC 387
Query: 121 RSKNVKD------AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+ + + AE+ + EM + N + C + + ++A ++VKEM ++G
Sbjct: 388 GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKG 447
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
P+A Y VI L +A R ++ + + P + TYT L+ +CKAG +E A
Sbjct: 448 FVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQ 507
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
M S G P+ TY + K ++ A +++ +M+ P+ +TY L+ L
Sbjct: 508 SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLD----------------TSTMLIHLLCRMYKFDEA 338
CK ++ A +V ++ +I+ D T L++ LC+ K +A
Sbjct: 568 CKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDA 627
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDS 392
+ M+ G P+ + + L D F K G AQ++ C + SV L+D
Sbjct: 628 HDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDR 687
Query: 393 RCKD 396
KD
Sbjct: 688 MFKD 691
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 11/293 (3%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L +L+ C QG A E + K D + P+ YN L+ + V+ A R
Sbjct: 171 LLNVLVRRCCLQGLWGEALEELGRLK--DFGYRPSAVTYNALVQVLASAGQVEMAFRVQK 228
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + T G+ + C+ R A+ L + +E + + ++ +I GL+EA
Sbjct: 229 EMSASGFCMDRSTVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEAS 285
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F E + R P +VTY +L+ G+ K L +I+ MM++ G PSP+ +N
Sbjct: 286 LFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFN 345
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK------LDLAIQVS 307
+ A L+ +M G P + Y+I + +C ++ LDLA +V
Sbjct: 346 SLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVY 405
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+EM C ++ + LC + KF++A ++M+R+G VP T+ ++
Sbjct: 406 EEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKV 458
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 11/248 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++ + G E A+ K + L+D L K G+V A E
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEK----KGCSPNVVTYTALIDGLGKAGKVDAGLEL 770
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + K + AP Y IL+N + + DA EM++ + + Y T V+G+
Sbjct: 771 FMQMKT--KGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF 828
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ R ++ L++EM P A VY +ID +AGR E + + + M
Sbjct: 829 SK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNM 886
Query: 215 VT---YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
+ +TSL++ C + +E A + M RG +P + + + + K +A+ L
Sbjct: 887 ASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
Query: 272 YRKMIESG 279
+ + G
Sbjct: 947 CYGICQEG 954
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 187 DGLVEAGRFEEVSGMMERFL--VCEPGPTMVT--YTSLVKGYCKAGDLEGASKILKMMIS 242
D L E FE+ + ER L + E ++ LV+ C G A + L +
Sbjct: 138 DALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKD 197
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE----D 298
G+ PS TYN + + G+VE A + ++M SG+ DR T + LCKE D
Sbjct: 198 FGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGD 257
Query: 299 KLDLAIQVSKEMKCRGCDIDLDT--STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
LDL + +E D LDT T +I L F+EA + M +P+ +T
Sbjct: 258 ALDL---LERE------DFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVT 308
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
++ L F K+ +++ N+M
Sbjct: 309 YRTLLTGFLKKKQLGWCKRIINMM 332
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR-VYNILLNGWFRSKNVKDAER 130
A ++ +L+DS K GR++ A E + E+ S + ++ L+ S V++A
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVA 910
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ EMR+ + P++ + LV+G + + A++L + +EG+
Sbjct: 911 LYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 166/350 (47%), Gaps = 14/350 (4%)
Query: 39 LIRRYARAGMVEAA-IWTFEFANNLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASE 93
L+RR R VE W F ++ DSG F +L+ CK G V +A
Sbjct: 111 LLRRVVRLRPVELERSWAF-------YLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARL 163
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + + + PTV +N L++G ++ V++ R M E V P+V T+ L+ G
Sbjct: 164 VFDEIPK--RGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALING 221
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ R+D L EM +G+ PN + + +IDG + G+ + + L P
Sbjct: 222 LCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPD 281
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY +L+ G CK GDL+ A +++ M + G P T+ K+G +E A+ + R
Sbjct: 282 LVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKR 341
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M+E G D + + +L+ LC++ ++ A ++ ++M G D T TM++ C+
Sbjct: 342 RMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKG 401
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
++M G VP +T+ L + K+G A+ L + M +V
Sbjct: 402 NVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNV 451
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 171/363 (47%), Gaps = 11/363 (3%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
E + +W L+ + P+F F +L+ + + G V +A F+ +
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFF---FFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVV 178
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDA 128
S F L+ CK G A E F + ++ + P V ++ L+NG + + +
Sbjct: 179 S----FNTLISGCCKAG---AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEG 231
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ EM + + PN VT+ L++G C+ +VD A++ + M +G+ P+ + YN +I+G
Sbjct: 232 SLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALING 291
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + G +E ++ P +T+T+L+ G CK GD+E A +I + M+ G
Sbjct: 292 LCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELD 351
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
+ + G+V DA + R M+ +G+ PD TY +++ CK+ + + ++ K
Sbjct: 352 DVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLK 411
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EM+ G + T L++ LC+ + A + M+ G+ P+ +T+ L + K G
Sbjct: 412 EMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471
Query: 369 MTA 371
+
Sbjct: 472 SSV 474
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 129/300 (43%), Gaps = 44/300 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G ++ F+ +V N F +L+D CK G+V A +
Sbjct: 214 TFSALINGLCKEGRLDEGSLLFDEMCGKGLVPN----GVTFTVLIDGQCKGGKVDLALKN 269
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F L Q P + YN L+NG + ++K+A R EM + P+ +T+ TL++G
Sbjct: 270 FQMM--LAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGC 327
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-------- 206
C+ ++ A+ + + M +EGIE + + + +I GL GR + M+ L
Sbjct: 328 CKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDD 387
Query: 207 ---------VCEPG------------------PTMVTYTSLVKGYCKAGDLEGASKILKM 239
C+ G P +VTY +L+ G CK G ++ A +L
Sbjct: 388 PTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDA 447
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++ G P+ TYN SK G D ++++ E G D +Y L+ K K
Sbjct: 448 MLNVGVAPNDITYNILLEGHSKHGSSVD-VDIFNS--EKGLVKDYASYTALVNESSKTSK 504
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 6/317 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G ++ AI N ++K + + IL+D+LCK+G+VK A
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLL----NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
L P V Y+ L++G+F VK A+ + M VTP+V TY L+ G+
Sbjct: 292 L--AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + VD A+ L KEM ++ + P + Y+++IDGL ++GR V +++ +
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADV 409
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY+SL+ G CK G L+ A + M + P+ T+ K G+++DA +++
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ GY + TY++++ CK+ L+ A+ + +M+ GC + T +I L + +
Sbjct: 470 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529
Query: 335 FDEASAEFEDMIRRGLV 351
D+A MI RGL+
Sbjct: 530 NDKAEKLLRQMIARGLL 546
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 170/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI+ G V+ A+ F + L + + F + L++ +CK G
Sbjct: 127 PDTVTLNT---LIKGLCLKGQVKKAL---HFHDKL-LAQGFQLNQVSYATLINGVCKIGD 179
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + RK + P V +Y+ +++ + + V +A + EM + ++ +VVTY
Sbjct: 180 TRGAIKLL--RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 237
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C ++ AI L+ EM + I PN YN ++D L + G+ +E ++ L
Sbjct: 238 STLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY++L+ GY +++ A + M G P TY F K V++
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDE 357
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+NL+++M + P +TY L+ LCK ++ + EM+ RG D+ T + LI
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLID 417
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ D A A F M + + P+ TF L D K G AQ++
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 2/316 (0%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + + L+ C +G++K A ++ + ++ P V YNIL++ +
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM--VLKTINPNVYTYNILVDALCKEGK 284
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
VK+A+ M K V P+V+TY TL++GY + V +A + M G+ P+ Y
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+G + +E + + P +VTY+SL+ G CK+G + ++ M RG
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
TY+ K G ++ A+ L+ KM + P+ T+ ILL LCK +L A
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V +++ +G +++ T ++I+ C+ +EA M G +P+ TF+ +
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Query: 365 KKRGMTALAQKLCNVM 380
K+ A+KL M
Sbjct: 525 FKKDENDKAEKLLRQM 540
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 6/297 (2%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + +N +L+ + + K+ A + + + P+++T L+ +C + ++
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G P+ + NT+I GL G+ ++ ++ L V+Y +L+ G C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K GD GA K+L+ + R P+ Y+ K+ V +A L+ +M G + D +
Sbjct: 176 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ C E KL AI + EM + + ++ T +L+ LC+ K EA + M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 346 IRRGLVPHYLTFKRLND------EFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
++ + P +T+ L D E KK A L V V L++ CK+
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 114/258 (44%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+NV DA + M TP ++ + +++ + +++ A+ L + +GI+P+ I
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I+ G+ ++ + L P VT +L+KG C G ++ A +++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+GF + +Y K G A+ L RK+ P+ Y ++ LCK +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + EM +G D+ T + LI+ C K EA +M+ + + P+ T+ L D
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 363 EFKKRGMTALAQKLCNVM 380
K G A+ + VM
Sbjct: 278 ALCKEGKVKEAKSVLAVM 295
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
++ VD A+ M P I +N ++D + + + R + P ++T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
L+ +C G + +L ++ RG+ P T N + G+V+ A++ + K++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G+ ++++Y L+ +CK AI++ +++ R +++ + +I LC+
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELL 390
EA F +M +G+ +T+ L F G A L N M +V L+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 391 DSRCKD 396
D+ CK+
Sbjct: 277 DALCKE 282
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%)
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
+++++F V+DA++ + +M+ +TP + ++ +L K A+ +S
Sbjct: 25 SSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHR 84
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ +G DL T +LI+ C M + + +++RG P +T L
Sbjct: 85 LELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 167/343 (48%), Gaps = 14/343 (4%)
Query: 32 SKDTFVILIRRYARAGMVEAAI-----WTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
S+ +F ++ + Y +A + AI +FEF VK+F+S +L+ + + G
Sbjct: 106 SEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCK-PTVKSFNS-------VLNVIIQAG 157
Query: 87 RVKAASEYF-HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
A E++ H D + P V +N+++ + V +A + EM P+
Sbjct: 158 FHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAY 217
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL++G C++ R+D A+ L+ EM+ EG P+ +N +I+GL + G F V+ +++
Sbjct: 218 TYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNM 277
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P VTY +L+ G C G L+ A +L M+S +P+ TY K G+
Sbjct: 278 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRA 337
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
D + M E GY + Y +L+ L KE K + A+++ KE +GC ++ + L
Sbjct: 338 LDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSAL 397
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ LCR K DEA +M +G P+ TF L F + G
Sbjct: 398 VDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVG 440
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 4/272 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L KQGR + +E + + VY++L++G F+ ++A R + E
Sbjct: 324 YGTIINGLVKQGRALDGARVLVLMEE--RGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKE 381
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ N V Y LV+G CR R+ D A++++ EM +G PNA +++++ G E G
Sbjct: 382 SMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGN 441
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + V Y+ L+ G CK G + A + M++ G P Y+
Sbjct: 442 SHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSS 501
Query: 255 FFRYFSKFGKVEDAMNLYRKMI--ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ G VE+A+ LY +M+ E PD +TY+IL LCK+ + A+ + M
Sbjct: 502 MIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLD 561
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
RGCD DL T + + +L + A+F D
Sbjct: 562 RGCDPDLVTCNIFLRMLREKLDPPQDGAKFLD 593
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 42/383 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAAS 92
+F ++ +AG + A+ EF N++ K+ + ++ F +++ S+CK G V A
Sbjct: 145 SFNSVLNVIIQAGFHDRAL---EFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAI 201
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
E F R+ + P Y L++G + + +A EM+ E P+ T+ L+
Sbjct: 202 ELF--REMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLIN 259
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C+ R +LV M +G PN + YNT+I GL G+ ++ +++R + + P
Sbjct: 260 GLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVP 319
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VTY +++ G K G +++L +M RG++ + Y+ K GK E+AM L+
Sbjct: 320 NEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLF 379
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT----------- 321
++ ++ G + + Y L+ LC++ K D A+++ EM +GC + T
Sbjct: 380 KESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEV 439
Query: 322 ------------------------STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++LIH LC+ K EA + M+ G P + +
Sbjct: 440 GNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAY 499
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ G A KL N M
Sbjct: 500 SSMIQGLCDAGSVEEALKLYNEM 522
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 144/334 (43%), Gaps = 18/334 (5%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEI----LLDSLCK 84
F S TF +LI + G +F +V N F G E+ L+ LC
Sbjct: 248 FPSPATFNVLINGLCKKG---------DFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
+G++ A + + P Y ++NG + D R + M + N
Sbjct: 299 KGKLDKALSLLDRM--VSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNE 356
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
Y LV G + + + A+RL KE +G + N ++Y+ ++DGL + +E ++
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSE 416
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
P T++SL+KG+ + G+ A ++ K M + Y+ K GK
Sbjct: 417 MTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGK 476
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD--IDLDTS 322
V +AM ++ KM+ +G PD + Y +++ LC ++ A+++ EM C D D+ T
Sbjct: 477 VMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITY 536
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+L + LC+ A M+ RG P +T
Sbjct: 537 NILFNALCKQSSISRAVDLLNSMLDRGCDPDLVT 570
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 179/438 (40%), Gaps = 94/438 (21%)
Query: 33 KDTFVILIRRYARAGMVEAAIWTF----EFA------------------NNLDMVKNFDS 70
+D F+ +I Y R G E A+ F EF N M+ +
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 71 GAS---------LFEILLDSLCKQGRVKAASEYF-------------------------- 95
+ ILL +LCK RV AA + F
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 96 --HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+EL + P+V VYN L++G + ++ A + EM V PNVV+Y ++
Sbjct: 229 KIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINS 288
Query: 154 YCRLRRVDRAIRLVKEM-----------------------------------RKEGIEPN 178
C V+ A L +M ++G EPN
Sbjct: 289 LCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT+I GL G EE + ++ P + TY+ L+ G+ K+GDL GAS+
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MIS G P+ TY K + A +L KM G TP+ +T++ +K LC
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNG 468
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+++ A+++ + M+ GC ++ T L+ L RM K++EA F+++ R L P+ +T+
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 359 RLNDEFKKRGMTALAQKL 376
+ F + GM A +L
Sbjct: 529 TVLYGFSRAGMMGEALQL 546
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 7/309 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF +++ + G + A + F++ E PTVR+YN LL+ + +
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEF--GCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M+K+ + PNV TY L++ C+ RVD A +L EM +G P+A+ Y T++ L +AG
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ ++ + RF P++ Y +L+ G CK G +E A K+L M+ G P+ +Y+
Sbjct: 229 KIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
G VE A L+ +M G + T+ L+K KL A+ + K M
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
GC+ ++ LIH LC +EA + M R G +P+ T+ L D F K G A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 374 QKLCNVMSS 382
+ N M S
Sbjct: 404 SETWNRMIS 412
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 181/418 (43%), Gaps = 49/418 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L K D+A L ++ PD V T+ ++ +AG ++ A
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAV---TYTTMVSSLCKAGKIDDA-------- 233
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ F ++ L+D +CK+GR++ A + + +D P V Y+ ++N
Sbjct: 234 -RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEM--MDNGVDPNVVSYSCIINSLC 290
Query: 121 RSKNVK-----------------------------------DAERFWLEMRKENVTPNVV 145
S NV+ +A W M ++ PNVV
Sbjct: 291 VSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVV 350
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y TL+ G C ++ A+++ +M++ G PN Y+ +IDG ++G S R
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +VTYT +V CK + A+ +++ M G P+ T+N F + G+V
Sbjct: 411 ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRV 470
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E AM L +M G P+ TY+ LL L + +K + A + +E++ R +L T +
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTV 530
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
++ R EA F + RG P +T+ + + K+G +A +L +SS+
Sbjct: 531 LYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 3/287 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC G ++ A + + + P V Y+IL++G+ +S ++ A W
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQR--SGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PNVVTY +V+ C+ D+A LV++M EG PN + +NT I GL GR
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ER P + TY L+ + E A + + + +R P+ TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ-VSKEMKCR 313
FS+ G + +A+ L+ K + G PD +TY+ ++ CK+ K+ +A Q V + +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ T T LI C +EA A + I +G+ P++ T+ L
Sbjct: 590 EWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 45/301 (14%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V+ +T LI G +E A+ + + N + + IL+D K G
Sbjct: 347 PNVVAYNT---LIHGLCSNGSLEEALQVCDQMQRSGCLPN----VTTYSILIDGFAKSGD 399
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ ASE +++ + P V Y +++ ++ A +M E TPN +T+
Sbjct: 400 LVGASETWNRM--ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTF 457
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T ++G C RV+ A++L++ M+ G PN YN ++D L ++EE G+ +
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV-- 265
P +VTY +++ G+ +AG + A ++ + RG P TYN + K GKV
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577
Query: 266 ----------------------------------EDAMNLYRKMIESGYTPDRLTYHILL 291
E+AM K I G P+ T++ L+
Sbjct: 578 AAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Query: 292 K 292
+
Sbjct: 638 R 638
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F + LC GRV+ A + + + P + YN LL+ FR ++A + E
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQ--GHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ N+ PN+VTY T++ G+ R + A++L + G P++I YNT+I + G+
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 195 FEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + ++ER + E P ++TYTSL+ G C ++E A L I++G P+ T+N
Sbjct: 575 VKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWN 634
Query: 254 YFFRYF 259
R F
Sbjct: 635 ALVRCF 640
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 5/258 (1%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
++ T Y +++ R + + +M+ + + + ++ GY R+ ++
Sbjct: 68 NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+++ + + G +P +YN ++D L+ +F+ ++ + P + TY L+K
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
CK ++ A K+ M ++G P TY K GK++DA L + + P
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKP 242
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
Y+ L+ +CKE ++++AI++ EM G D ++ + + +I+ LC + A A F
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 343 EDMIRRGLVPHYLTFKRL 360
M RG + TF L
Sbjct: 303 AQMFLRGCDANIHTFTPL 320
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 172/335 (51%), Gaps = 13/335 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTF-EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI +G ++ A + E A N ++ +L+ + GR++ E
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAEN-----GVSPDVVVYNTMLNGYLRAGRIEECLE 346
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ K +++ TV YNIL+ G F + V +A W + +++ + +TYG LV G
Sbjct: 347 LW---KVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 403
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG 211
C+ +++A+ +++E + + Y+++I+GL GR +EV+G++++ C+P
Sbjct: 404 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 463
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + +++ G+ +A LE A + M+S+G P+ TYN SK + +A L
Sbjct: 464 PHVC--NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++M+ G+ P+ +TY +L+ LC+ KLD+A+ + + +G D+ ++IH LC
Sbjct: 522 VKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCS 581
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
K ++A + +M +R VP+ +T L + F K
Sbjct: 582 SGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 169/369 (45%), Gaps = 15/369 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK+ + K+FD A LL PD S T LI A+ G + A+ F+
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGT---LINSLAKNGYMSDALKLFDEMP 211
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + IL+D K+G + ASE + +R S P + YN+++NG
Sbjct: 212 E----RGVTPDVACYNILIDGFFKKGDILNASEIW-ERLLKGPSVYPNIPSYNVMINGLC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ W M+K ++ TY TL+ G C +D A R+ KEM + G+ P+ +
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326
Query: 181 VYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
VYNT+++G + AGR E E+ +ME+ E T+V+Y L++G + ++ A I
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEK----EGCRTVVSYNILIRGLFENAKVDEAISIW 382
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ + TY K G + A+++ + D Y ++ LC+E
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 442
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+LD V +M GC + +I+ R K ++A F +M+ +G P +T+
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502
Query: 358 KRLNDEFKK 366
L + K
Sbjct: 503 NTLINGLSK 511
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 150/330 (45%), Gaps = 14/330 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA--- 91
++ ILIR V+ AI +E D + + + +L+ LCK G + A
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCAD----SMTYGVLVHGLCKNGYLNKALSI 416
Query: 92 -SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E + R +LD Y+ ++NG R + + +M K PN +
Sbjct: 417 LEEAENGRGDLD------TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G+ R +++ A+R M +G P + YNT+I+GL +A RF E +++ L
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P M+TY+ L+ G C+ L+ A + + +GF P +N GKVEDA+
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
LY +M + P+ +T++ L++ K + A ++ + G D+ + + + LC
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLC 650
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ +A D + RG++P +T+ L
Sbjct: 651 SCHRISDAVGFLNDAVDRGVLPTAITWNIL 680
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 57/327 (17%)
Query: 6 AKAKEFDSAWCLLLDKIGGHEVPDFVSKD-TFVILIRRYARAGMVEAAIWTFEFANNLDM 64
AK E S W LL +K D + T+ +L+ + G + A+ E A N
Sbjct: 373 AKVDEAISIWELLPEK-------DCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN--- 422
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
D + +++ LC++GR+ + + + P V N ++NG+ R+
Sbjct: 423 -GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK--HGCKPNPHVCNAVINGFVRASK 479
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY-- 182
++DA RF+ M + P VVTY TL+ G + R A LVKEM +G +PN I Y
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539
Query: 183 ---------------------------------NTVIDGLVEAGRFEEV----SGMMERF 205
N +I GL +G+ E+ S M +R
Sbjct: 540 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
V P +VT+ +L++G+ K D E ASKI ++ G P +YN + ++
Sbjct: 600 CV----PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRI 655
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLK 292
DA+ ++ G P +T++IL++
Sbjct: 656 SDAVGFLNDAVDRGVLPTAITWNILVR 682
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +R YN LLN S +AE F+L ++PN+ TY L++ CR ++ D+A L
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 171
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M ++G P+ Y T+I+ L + G + + + P + Y L+ G+ K
Sbjct: 172 LNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 231
Query: 227 AGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
GD+ AS+I +++ P+ +YN K GK +++ ++ +M ++ D
Sbjct: 232 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ LC LD A +V KEM G D+ +++ R + +E ++ M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351
Query: 346 IRRG 349
+ G
Sbjct: 352 EKEG 355
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 37/314 (11%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
++ T V++ +L F K V R +R + T+++ Y + D+A
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97
Query: 164 IRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+ + + M + G +P YN++++ L+E+ +++E F P + TY L+K
Sbjct: 98 LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
C+ + A ++L M +GF P +Y +K G + DA+ L+ +M E G TP
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217
Query: 283 D-------------------------RL-----------TYHILLKILCKEDKLDLAIQV 306
D RL +Y++++ LCK K D + ++
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
MK DL T + LIH LC D A+ +++M G+ P + + + + + +
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337
Query: 367 RGMTALAQKLCNVM 380
G +L VM
Sbjct: 338 AGRIEECLELWKVM 351
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KA+ F A+ L+ + + P+ + T+ +L+ + ++ A+ + A
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMI---TYSLLMNGLCQGKKLDMALNLWCQA- 560
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F + I++ LC G+V+ A + + + K+ + P + +N L+ G++
Sbjct: 561 ---LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ--RKCVPNLVTHNTLMEGFY 615
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ + A + W + + P++++Y ++G C R+ A+ + + G+ P AI
Sbjct: 616 KVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAI 675
Query: 181 VYNTVIDGLVEAG 193
+N ++ +++ G
Sbjct: 676 TWNILVRAVLDNG 688
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 12/235 (5%)
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAG 228
R G V++ ++ L + VS ++E R C+ P V T ++K Y K
Sbjct: 35 RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCK-CPEDVALT-VIKAYAKNS 92
Query: 229 DLEGASKILKMMISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
+ A I + M G P +YN + K ++A + + G +P+ TY
Sbjct: 93 MPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTY 152
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+IL+KI C++ + D A ++ M +G D+ + LI+ L + +A F++M
Sbjct: 153 NILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLC-------NVMSSVPRSMELLDSRCK 395
RG+ P + L D F K+G A ++ +V ++P +++ CK
Sbjct: 213 RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 267
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKA 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M SG P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L ++F K G A KL +
Sbjct: 325 EAGHYGLLIEKFCKAGQYDKAVKLLD 350
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L S + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSNTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGS 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GSGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EPNA YN +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPNA--YNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 137/282 (48%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V +N L+NG R V +AE M + PN VTYGT+V G C++ D A+ L++
Sbjct: 10 VVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLR 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M + I+ + ++Y +ID L + G + + P ++TY ++ G C G
Sbjct: 70 KMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A ++L+ MI P T+N F K GK+ +A LYR+M+ PD +TY+
Sbjct: 130 KWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ CK +LD A + M +G ++ T LI CR + D+ +M+RR
Sbjct: 190 SLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRR 249
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
GLVP +++ L F + G AQ L M S R + +L
Sbjct: 250 GLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRWILIL 291
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 2/274 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC++GRV A + E P Y ++NG + + A +
Sbjct: 13 FNTLMNGLCREGRVLEAEALVDRMVE--NGHQPNEVTYGTIVNGMCKMGDTDSALNLLRK 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++ +VV Y +++ C+ +A L EM +GI PN + YN +IDG G+
Sbjct: 71 MDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGK 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + ++ + P +VT+ +L+ + K G + A ++ + M+ R P TYN
Sbjct: 131 WTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNS 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K +++DA +++ M+ G +P+ +T + L+ C+ ++D I++ EM RG
Sbjct: 191 LIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRG 250
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
D + LIH C+ + A F++MI +
Sbjct: 251 LVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 17/247 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + K + DSA LL H D V + +I R + G A F +
Sbjct: 51 IVNGMCKMGDTDSALNLLRKMDESHIKADVV---IYTAIIDRLCKDGHHSKAQNLFTEMH 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + N + + ++D C G+ A + R ++ + P V +N L+N +
Sbjct: 108 DKGIFPNVLT----YNCMIDGCCSYGKWTDAEQLL--RDMIESNVDPDVVTFNALINAFV 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +AE + EM N+ P+ +TY +L++G+C+ R+D A + M +G PN I
Sbjct: 162 KEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVI 221
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
NT+I G A R ++ + M+ R LV P V+Y +L+ G+C+AGDL A +
Sbjct: 222 TINTLIGGCCRAKRVDDGIKLLHEMLRRGLV----PDSVSYNTLIHGFCQAGDLNAAQDL 277
Query: 237 LKMMISR 243
+ MIS+
Sbjct: 278 FQEMISQ 284
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M ++G + + + +NT+++GL GR E +++R + P VTY ++V G CK GD
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 230 LEGASKILKM-----------------------------------MISRGFLPSPTTYNY 254
+ A +L+ M +G P+ TYN
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+GK DA L R MIES PD +T++ L+ KE K+ A ++ +EM R
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D T LI C+ + D+A F+ M+ +G P+ +T L
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTL 226
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 169/364 (46%), Gaps = 45/364 (12%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
++D V I +ARAG + A+ TF A++L D G ++ LLD+L ++ V A
Sbjct: 32 TEDALVAAIGAFARAGSADRALKTFYRASDLGC---RDPGVRVYNHLLDALLRENMVGAV 88
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ ++ P V YN+L+ ++ V A + EM ++ P+ V++GT+V
Sbjct: 89 VPVYDNMRKAGVD--PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIV 146
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G C+L RV+ A + E P YN V+ L R EV ++ +
Sbjct: 147 SGMCKLGRVEEARGFLAE-----TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQ 201
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +VTYT++V +CKA +L A IL M+S G P+ T+ + F + GKV DA+++
Sbjct: 202 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 261
Query: 272 YRKMIESGYTPDRLTYHILLKILC-----------------------------------K 296
+ M++ G+ P ++Y++L++ LC
Sbjct: 262 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 321
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
LD A+ + EMK GC ++ T +I +LC+ FD+A + + M+ P+ +T
Sbjct: 322 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVT 381
Query: 357 FKRL 360
F L
Sbjct: 382 FNTL 385
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 11/361 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ KA+E A +L + P+ + TF L++ + G V A+ + +
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVL---TFTALVKGFFEDGKVHDALSMWHW-- 264
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV + +++ + +L+ LC G +K A ++F+ K + P Y+ L++G+
Sbjct: 265 ---MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR--NALLPNATTYSTLVDGF 319
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++ A W EM+ PNVV Y +++ C+ D+A L+ +M + PN
Sbjct: 320 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT 379
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ +NT+I L + GR + P TY L+ G + G+ + A ++
Sbjct: 380 VTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIE 439
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++ GF S TYN + + AM L +M+ G PD T++ ++ CKE K
Sbjct: 440 MLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGK 499
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ +A + +M C ++ T+LI LC K A M+ G+ P+ T+
Sbjct: 500 VSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 559
Query: 360 L 360
L
Sbjct: 560 L 560
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 6/304 (1%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ + + G A + F++ +L P VRVYN LL+ R V + MRK
Sbjct: 40 IGAFARAGSADRALKTFYRASDLG-CRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKA 98
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
V PNV TY L+ C+ RVD A +++ EM ++G P+ + + T++ G+ + GR EE
Sbjct: 99 GVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 158
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
G + E P +Y ++V C + ++ M+ RG P+ TY
Sbjct: 159 RGFLA-----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
F K ++ A + +M+ G TP+ LT+ L+K ++ K+ A+ + M G
Sbjct: 214 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 273
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ +LI LC + A F M R L+P+ T+ L D F G A + N
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 333
Query: 379 VMSS 382
M S
Sbjct: 334 EMKS 337
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 4/315 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D+ CK ++ A + + P V + L+ G+F V DA W
Sbjct: 207 YTTIVDAFCKARELRMACAILARM--VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHW 264
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E P+ ++Y L+ G C + + A+ M++ + PNA Y+T++DG AG
Sbjct: 265 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 324
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + P +V YT+++ CK + A ++ M+ P+ T+N
Sbjct: 325 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 384
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+V A+N++ M +G P+ TY+ LL L +E A + EM G
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 444
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ L T +I+ LC+M A M+ +G+ P TF + + K G ++A
Sbjct: 445 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 504
Query: 375 KLCNVMSSV--PRSM 387
L M++V PR++
Sbjct: 505 CLLGQMNAVNCPRNV 519
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
++ N F L+ LC GRV A FH + P R YN LL+G FR
Sbjct: 371 LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR--NGCHPNDRTYNELLHGLFREG 428
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N KDA +EM ++VTY T++ C++ A+ L+ M +GI+P+A +N
Sbjct: 429 NHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFN 488
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I + G+ + ++ + +V YT L+ C G L A L M+
Sbjct: 489 AIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYE 548
Query: 244 GFLPSPTTYNYFFR-YFSKFGKVEDAMNLYRKMIE 277
G P+ T+N R F+ G + ++L++ ++E
Sbjct: 549 GICPNEATWNVLVRAIFTNIGTI-GPIHLFKYIVE 582
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 37/342 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F +++D K G + A + K + + S P YN +NG+ + N+ AE F
Sbjct: 201 FNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKK 260
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + PNV TY TLV+GY R+ ++ A RL E+ ++G+ PN+++YN++I L G
Sbjct: 261 EMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEG 320
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG------------------------- 228
E S ++ + P TY+ +++G C+ G
Sbjct: 321 DMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHN 380
Query: 229 ----------DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L GA ++L M RG +P T+ K GKVE+A+ +Y KMI++
Sbjct: 381 VVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKT 440
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ L Y+ ++ KE D AI + ++ G D+ T LIH C K D+A
Sbjct: 441 GEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQA 499
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F +M G++ ++T+ L + K G A++L +M
Sbjct: 500 FALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMM 541
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 142/273 (52%), Gaps = 16/273 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+++ LC+ G + A ++ + L+ S +N+++N RS N+ A++
Sbjct: 344 YSIVIEGLCRNGYLNEAFKFL--QMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLAN 401
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVT+GTL++ +C+ +V+ AI++ ++M K G +PN ++YN+VI+G + G
Sbjct: 402 MYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGS 461
Query: 195 FEEVSGMME---RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
F+ +++ R + + +VTY +L+ GYC G ++ A + M + G L S T
Sbjct: 462 FDPAILLIDTLRRMGLFD----VVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVT 517
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN K G V A L + M+ G PD +TY IL+ K+ + I++ M
Sbjct: 518 YNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMV 577
Query: 312 CRGCDIDLDT-STMLIHLLCRMYKFDEASAEFE 343
+G D T TM+I LL E S EF+
Sbjct: 578 LKGVVPDRQTYQTMVIPLL------QEESVEFD 604
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 172/386 (44%), Gaps = 25/386 (6%)
Query: 1 MIKVLAKAKEFDSAWCLL-----LDKIGGHEVPDFV---------SKDTFVILIRRYARA 46
+I VL +K +D A ++ ++ I EV D + S F L+R +
Sbjct: 47 VIHVLVNSKRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQI 106
Query: 47 GMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSW 105
G E A +E L + F + L L K V + ++ KE+ +
Sbjct: 107 GATEGA---YEVITKLQL-DGFWVTVHAWNNFLSHLLKLNDV---NRFWKMYKEMVSYGY 159
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
V +N+++ + + +A K + PNVVT+ +++G ++ +D A++
Sbjct: 160 IENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALK 219
Query: 166 LVKEMRKEG---IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
LV++M ++P+++ YN+ ++G + G + L E P + TY +LV
Sbjct: 220 LVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVD 279
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
GY + G LE A ++ ++ +G LP+ YN + S G +E A L MI+ P
Sbjct: 280 GYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYP 339
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D+ TY I+++ LC+ L+ A + + + D + ++I+ LCR A
Sbjct: 340 DQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLL 399
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRG 368
+M RGLVP +TF L D K G
Sbjct: 400 ANMYVRGLVPDVVTFGTLIDRHCKDG 425
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 149/326 (45%), Gaps = 7/326 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ Y R G +E A F + L + K + ++ ++ L +G ++ AS
Sbjct: 273 TYATLVDGYTRVGSLENA---FRLCDEL-VEKGLLPNSVIYNSIIHWLSMEGDMEGASLL 328
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+D+ P Y+I++ G R+ + +A +F + + ++ + ++ ++
Sbjct: 329 LSDM--IDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYL 386
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR + A +L+ M G+ P+ + + T+ID + G+ E + E+ + P +
Sbjct: 387 CRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNL 446
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+ Y S++ G+ K G + A ++ + G TYN + GK++ A L+ +
Sbjct: 447 LIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSE 505
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M SG +TY+ L+ LCK + A ++ K M RG D T T+LI +
Sbjct: 506 MRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCS 565
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
+E + M+ +G+VP T++ +
Sbjct: 566 PEEVIELHDYMVLKGVVPDRQTYQTM 591
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
T+ + + + K D+ K+ K M+S G++ + T+N K G++ +A+++
Sbjct: 127 TVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVI 186
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTM--LIHLL 329
+ +++G P+ +T+++++ K +DLA+++ ++M+ GC + D+ T ++
Sbjct: 187 YRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGF 246
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
C++ A ++M+ + + P+ T+ L D + + G A +LC+
Sbjct: 247 CKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCD 295
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 179/438 (40%), Gaps = 94/438 (21%)
Query: 33 KDTFVILIRRYARAGMVEAAIWTF----EFA------------------NNLDMVKNFDS 70
+D F+ +I Y R G E A+ F EF N M+ +
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 71 GAS---------LFEILLDSLCKQGRVKAASEYF-------------------------- 95
+ ILL +LCK RV AA + F
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 96 --HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+EL + P+V VYN L++G + ++ A + EM V PNVV+Y ++
Sbjct: 229 KIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINS 288
Query: 154 YCRLRRVDRAIRLVKEM-----------------------------------RKEGIEPN 178
C V+ A L +M ++G EPN
Sbjct: 289 LCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YNT+I GL G EE + ++ P + TY+ L+ G+ K+GDL GAS+
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MIS G P+ TY K + A +L KM G TP+ +T++ +K LC
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNG 468
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+++ A+++ + M+ GC ++ T L+ L RM K++EA F+++ R L P+ +T+
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 359 RLNDEFKKRGMTALAQKL 376
+ F + GM A +L
Sbjct: 529 TVLYGFSRAGMMGEALQL 546
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 7/309 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF +++ + G + A + F++ E PTVR+YN LL+ + +
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEF--GCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M+K+ + PNV TY L++ C+ RVD A +L EM +G P+A+ Y T++ L +AG
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ ++ + RF P++ Y +L+ G CK G +E A K+L M+ G P+ +Y+
Sbjct: 229 KIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
G VE A L+ +M G + T+ L+K KL A+ + K M
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
GC+ ++ LIH LC +EA + M R G +P+ T+ L D F K G A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 374 QKLCNVMSS 382
+ N M S
Sbjct: 404 SETWNRMIS 412
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 139/287 (48%), Gaps = 3/287 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC G ++ A + + + P V Y+IL++G+ +S ++ A W
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQR--SGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PNVVTY +V+ C+ D+A LV++M EG PN I +NT I GL GR
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ER P + TY L+ + E A + + + +R P+ TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ-VSKEMKCR 313
FS+ G + +A+ L+ K + G PD +TY+ ++ CK+ K+ +A Q V + +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ T T LI C +EA A + I +G+ P++ T+ L
Sbjct: 590 EWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 181/418 (43%), Gaps = 49/418 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L K D+A L ++ PD V T+ ++ +AG ++ A
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAV---TYTTMVSSLCKAGKIDDA-------- 233
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ F ++ L+D +CK+GR++ A + + +D P V Y+ ++N
Sbjct: 234 -RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEM--MDNGVDPNVVSYSCIINSLC 290
Query: 121 RSKNVK-----------------------------------DAERFWLEMRKENVTPNVV 145
S NV+ +A W M ++ PNVV
Sbjct: 291 VSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVV 350
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y TL+ G C ++ A+++ +M++ G PN Y+ +IDG ++G S R
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +VTYT +V CK + A+ +++ M G P+ T+N F + G+V
Sbjct: 411 ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRV 470
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E AM L +M G P+ TY+ LL L + +K + A + +E++ R +L T +
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTV 530
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
++ R EA F + RG P +T+ + + K+G +A +L +SS+
Sbjct: 531 LYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 45/301 (14%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V+ +T LI G +E A+ + + N + + IL+D K G
Sbjct: 347 PNVVAYNT---LIHGLCSNGSLEEALQVCDQMQRSGCLPN----VTTYSILIDGFAKSGD 399
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ ASE +++ + P V Y +++ ++ A +M E TPN +T+
Sbjct: 400 LVGASETWNRM--ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITF 457
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T ++G C RV+ A++L++ M+ G PN YN ++D L ++EE G+ +
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV-- 265
P +VTY +++ G+ +AG + A ++ + RG P TYN + K GKV
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577
Query: 266 ----------------------------------EDAMNLYRKMIESGYTPDRLTYHILL 291
E+AM K I G P+ T++ L+
Sbjct: 578 AAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Query: 292 K 292
+
Sbjct: 638 R 638
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F + LC GRV+ A + + + P + YN LL+ FR ++A + E
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQ--GHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ N+ PN+VTY T++ G+ R + A++L + G P++I YNT+I + G+
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 195 FEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + ++ER + E P ++TYTSL+ G C ++E A L I++G P+ T+N
Sbjct: 575 VKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWN 634
Query: 254 YFFRYF 259
R F
Sbjct: 635 ALVRCF 640
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%), Gaps = 5/258 (1%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
++ T Y +++ R + + +M+ + + + ++ GY R+ ++
Sbjct: 68 NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+++ + + G +P +YN ++D L+ +F+ ++ + P + TY L+K
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
CK ++ A K+ M ++G P TY K GK++DA L + + P
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKP 242
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
Y+ L+ +CKE ++++AI++ EM G D ++ + + +I+ LC + A A F
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 343 EDMIRRGLVPHYLTFKRL 360
M RG + TF L
Sbjct: 303 AQMFLRGCDANIHTFTPL 320
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 8/330 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ--SWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ ILL LC + R + A H D P V Y ++NG R + A +
Sbjct: 170 YNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLF 229
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + ++PN +TY L+ GYC + AI + ++M ++G+EP+ + YNT++ L +
Sbjct: 230 DEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKN 289
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR E + + + P Y +L+ GY G L ++L +M+ G P +
Sbjct: 290 GRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++K G V++AM + KM + G P+ +TY ++ LC+ K+D A+ +
Sbjct: 350 NILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
G + LIH LC K+D+A +MI RG+ P+ + F L + K GM
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469
Query: 373 AQKLCNVMSSVPRSME------LLDSRCKD 396
A+ + ++M V + L+D C D
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLD 499
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ GMV+ A+ F + N + + ++D+LC+ G+V A F
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVT----YGTVMDALCRVGKVDDAMSQF 404
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ + + P V+ L++G AE +EM + PN + + TL+ C
Sbjct: 405 DRL--ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLC 462
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ V RA + M + ++ + I Y T+IDG G+ +E + ++E ++ P V
Sbjct: 463 KEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEV 522
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +++ GYCK G +E A + + M S+G P Y+ + ++ A LY M
Sbjct: 523 TYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM 582
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD----TSTMLIHLLCR 331
I+ G TY+I+L+ LC+ + D A+++ + C ID T ++I L +
Sbjct: 583 IKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNL----CLIDFHLQNRTFNIMIDALLK 638
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTF 357
+ DEA F ++ RGLVP+ +T+
Sbjct: 639 GGRHDEAKDLFASLLARGLVPNVVTY 664
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 157/333 (47%), Gaps = 15/333 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ I+I +RAG ++ A FA +++ + + A F LL LC R A +
Sbjct: 98 TYSIVIGCCSRAGHLDLA-----FAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV----TPNVVTYGT 149
+R P YNILL G + A M ++ P+VV+Y T
Sbjct: 153 IALRRMPA-LGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTT 211
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ G R ++D+A L EM +G+ PN I YN ++ G +G+ +E G+ + +C
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRK--MCR 269
Query: 210 PG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
G P +VTY +L+ CK G A K+ M+ +G P + Y ++ G +
Sbjct: 270 DGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQ 329
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L M+ +G PD ++IL+ K +D A+ +M+ +G ++ T ++
Sbjct: 330 MHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMD 389
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LCR+ K D+A ++F+ +I GL P+ + F+ L
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTL 422
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 12/373 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + + D A+CL + + P+ + T+ L+ Y +G + AI F
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCI---TYNCLLHGYCSSGKPKEAIGIFR--- 265
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M ++ + + L+ LCK GR A + F + + P +Y LL+G+
Sbjct: 266 --KMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSM--VKKGHKPDSSIYGTLLHGY 321
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + M + P+ + L+ Y + VD A+ +MR++G+ PN
Sbjct: 322 ATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNI 381
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y TV+D L G+ ++ +R + P V + +L+ G C + A ++
Sbjct: 382 VTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVE 441
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI RG P+ +N + K G V A N++ M+ D +TY L+ C + K
Sbjct: 442 MIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGK 501
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D A ++ + M G + T +I+ C+ + ++A + F M +G+ P + +
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYST 561
Query: 360 -LNDEFKKRGMTA 371
L+ F+ R + A
Sbjct: 562 ILHGLFQTRRIAA 574
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 4/303 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L ++G++ A F + LDQ +P YN LL+G+ S K+A + +
Sbjct: 209 YTTVINGLLREGQLDKAYCLFDEM--LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRK 266
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V P+VVTY TL+ C+ R A ++ M K+G +P++ +Y T++ G G
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY 326
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ +++ + P + L+ Y K G ++ A M +G P+ TY
Sbjct: 327 LVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGT 386
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ GKV+DAM+ + ++I G TP+ + + L+ LC DK D A +++ EM RG
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446
Query: 315 -CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
C + +T+L H LC+ A F+ M+R + +T+ L D + G A
Sbjct: 447 ICPNTIFFNTLLNH-LCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEA 505
Query: 374 QKL 376
KL
Sbjct: 506 TKL 508
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 2/245 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F LL+ LCK+G V A F +D V Y L++G+ V +A +
Sbjct: 453 FFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQC--DVITYTTLIDGYCLDGKVDEATKLLE 510
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + V PN VTY T++ GYC+ R++ A L ++M +G+ P ++Y+T++ GL +
Sbjct: 511 GMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTR 570
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + + C + TY +++G C+ + A ++ + F T+N
Sbjct: 571 RIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFN 630
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G+ ++A +L+ ++ G P+ +TY +++K L ++ L+ + ++
Sbjct: 631 IMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKN 690
Query: 314 GCDID 318
GC D
Sbjct: 691 GCTAD 695
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 7/275 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y G V+ A E LD VK + +++ CK GR++ A
Sbjct: 488 TYTTLIDGYCLDGKVDEATKLLE-GMVLDGVK---PNEVTYNTIINGYCKNGRIEDACSL 543
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F R+ + P + +Y+ +L+G F+++ + A+ +L M K + + TY +++G
Sbjct: 544 F--RQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGL 601
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ D A+R+ + +N +ID L++ GR +E + L P +
Sbjct: 602 CQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNV 661
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY ++K + G LE + + G N + G+V A K
Sbjct: 662 VTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSK 721
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
+ E+ ++ + T L+ L K D I E
Sbjct: 722 IDENNFSLEASTAESLV-FLVSSGKYDQHINSIPE 755
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 210 PGPTMVTYTSLVKGYC-KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + TY S+V G C +AG L+ A L +I G+ T++ + + DA
Sbjct: 92 PRADLCTY-SIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDA 150
Query: 269 MNL-YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR----GCDIDLDTST 323
M++ R+M G TP+ +Y+ILLK LC E++ A+ + M GC D+ + T
Sbjct: 151 MDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYT 210
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+I+ L R + D+A F++M+ +G+ P+ +T+ L
Sbjct: 211 TVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCL 247
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 172/372 (46%), Gaps = 41/372 (11%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ +LI+ GM + A+ + V N + + IL+D LC++G+++ A
Sbjct: 276 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHT----YTILIDRLCREGKIEEA 331
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F RK L P + +N L+NG+ + V A + M K N PN+ TY L+
Sbjct: 332 NGVF--RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 389
Query: 152 EGYCR----------LRRV-------DR------------------AIRLVKEMRKEGIE 176
EG CR LRRV DR A + M G+E
Sbjct: 390 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE 449
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ + +IDGL + GR E+ +G++ + VT+T+L+ G+CK G + +
Sbjct: 450 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 509
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M+ L + T+N F K K+ +A + KM++ G P +T+ IL++ C+
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ L++++ + MK GC ++ T T++I+ LC + +EA M G+ P++ T
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629
Query: 357 FKRLNDEFKKRG 368
+ L K G
Sbjct: 630 YAVLVKAHVKAG 641
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 149/286 (52%), Gaps = 1/286 (0%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C++ + A F K + +++ P Y+IL++G + +++A + EM ++ P
Sbjct: 217 CRRDDLGEAFRVFEKMSK-EENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 275
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ TY L++ C + D+A++++ EM + PN Y +ID L G+ EE +G+
Sbjct: 276 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 335
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L P ++T+ +L+ GYCK G + A ++L +M P+ TYN +
Sbjct: 336 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
K A L R+++++G PDR+TY+IL+ CKE +L++A + M G + D T
Sbjct: 396 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 455
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T LI LC++ + ++A+ M+++G+ +TF L D K G
Sbjct: 456 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 501
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 153/340 (45%), Gaps = 43/340 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ LC+ GR++ A + K++ +++ P+ R Y +L+ A + E
Sbjct: 245 YSILIHGLCEAGRLEEAFQL--KQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 302
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNV TY L++ CR +++ A + ++M K G+ P I +N +I+G + G
Sbjct: 303 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 362
Query: 195 FEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
V + V E G P + TY L++G C+ A +L+ ++ G LP T
Sbjct: 363 ---VVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 419
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN F K G++ A N++ M +G PD T+ L+ LCK +L+ A + M
Sbjct: 420 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 479
Query: 312 CRGCDIDLDTSTMLIHLLCRM-----------------------------------YKFD 336
+G +D T T LI C++ YK +
Sbjct: 480 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 539
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA+A M++ GLVP +T L + + G TAL+ K+
Sbjct: 540 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 579
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 41/316 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y + G V +A + N + + L++ LC+ K+ +
Sbjct: 349 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT----YNELMEGLCRVS--KSYKAF 402
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R+ +D P YNIL++G+ + + A + M + P+ T+ L++G
Sbjct: 403 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 462
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------------------- 194
C+L R+++A ++ M K+GI + + + +IDG + G+
Sbjct: 463 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 522
Query: 195 ---------------FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
E + M+ + + P++VT+T L++G+C+AG+ + K+L+
Sbjct: 523 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 582
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G P+ TY G+VE+A + M G +P+ TY +L+K K +
Sbjct: 583 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 642
Query: 300 LDLAIQVSKEMKCRGC 315
LD A Q+ M GC
Sbjct: 643 LDRAFQIVSTMVKNGC 658
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 157/382 (41%), Gaps = 51/382 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLCKQGRVKA 90
TF LI + G +E A MVK G SL F L+D CK G+ K
Sbjct: 454 TFTALIDGLCKLGRLEQANGILG-----SMVK---KGISLDEVTFTALIDGHCKIGKAKD 505
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
F E T +N L+ + + +A +M K + P+VVT+ L
Sbjct: 506 VCFLFENMVE--NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 563
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+EG+CR ++++++ M++ G PN Y +I+GL GR EE ++
Sbjct: 564 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 623
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF------------RY 258
P TY LVK + KAG L+ A +I+ M+ G P+ Y+ R
Sbjct: 624 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARA 683
Query: 259 FSKFGKVED-------------AMNLYRKM-----------IESGYTPDRLTYHILLKIL 294
S G ++ + +++R M I+ P Y+ L+ L
Sbjct: 684 LSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGL 743
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CKE ++ A Q++++M G D S+++ H C+ K+D + ++ VP +
Sbjct: 744 CKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY-CKTCKYDNCLEFMKLVLDNKFVPSF 802
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
++ + + G AQKL
Sbjct: 803 ASYCWVIHGLRNEGRVQEAQKL 824
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ +L A + + M EG I Y TV++ L + G + + L
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKV 265
G TSLV C+ DL A ++ KM P+ TY+ + G++
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E+A L ++M+E G P TY +L+K C D A+++ EM + C ++ T T+L
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I LCR K +EA+ F M++ GL P +TF L + + K G A +L +VM
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 119/312 (38%), Gaps = 48/312 (15%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP V T ILI + RAG ++ E N + + I+++ LC G
Sbjct: 554 VPSVV---THTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT----YTIIINGLCNNG 606
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
RV+ A S P Y +L+ ++ + A + M K PN
Sbjct: 607 RVEEAETILFSMSSFGVS--PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 664
Query: 147 YGTLVEGYC-------------------------------------RLRRVDRAIRLVKE 169
Y L+ G+ RL VD A+++ E
Sbjct: 665 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE 724
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
++K G+ P +YN ++ GL + GR E + + + P +S+++ YCK
Sbjct: 725 IKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCK 782
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ + +K+++ F+PS +Y + G+V++A L ++ + +
Sbjct: 783 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTP 842
Query: 290 LLKILCKEDKLD 301
++ L KE++ D
Sbjct: 843 SIEFLMKEEEDD 854
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 48/205 (23%)
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M GF S Y+ +K A +YR+M+ G+ + Y ++ LCK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183
Query: 297 E-----------------------------------DKLDLAIQV----SKEMKCRGCDI 317
D L A +V SKE CR +
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
T ++LIH LC + +EA ++M+ +G P T+ L GMT A K+
Sbjct: 244 ---TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKML 300
Query: 378 NVMSS---VPRSME---LLDSRCKD 396
+ M++ VP L+D C++
Sbjct: 301 DEMATKACVPNVHTYTILIDRLCRE 325
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 23/404 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L +A D L+ + +PD T+ IL R G + F +
Sbjct: 271 LLSGLCRAGRMDETRALMDEMTSYSMLPDGF---TYSILFDGLTRTGDSRTMLSLFGES- 326
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K GA ILL+ LCK G+V A + + PT +YN L+NG+
Sbjct: 327 ---LKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML--VHTGLVPTTAIYNTLINGYC 381
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++++ A + +M+ ++ P+ +TY L+ G C++ + A LV EM K G++P+
Sbjct: 382 QVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVE 441
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+NT+ID AG+ E+ +S M ++ + ++++ S+VK +CK G + A I
Sbjct: 442 TFNTLIDAYGRAGQLEKCFTVLSDMQDKGI----KSNVISFGSVVKAFCKNGKIPEAVAI 497
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI + +P+ YN + + G E A L KM SG + TY++LLK LCK
Sbjct: 498 LDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCK 557
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
++D A ++ + +G D+ + +I C D A ++M + + P T
Sbjct: 558 NSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRT 617
Query: 357 FKRLNDEFKKRG----MTALAQKLCNVMSSVPRSMELLDSRCKD 396
+ L G M L Q + V +V S + +RC++
Sbjct: 618 YHPLLSALGSAGRVHDMECLYQHM--VHKNVEPSSSIYGTRCEN 659
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P YN+++ G +RS DA + + EM V PN +TY T+++G+ + ++ RL
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M ++G +PN + YN ++ GL AGR +E +M+ P TY+ L G +
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD + + +G + T + K GKV A + ++ +G P
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ C+ L A + ++MK R D T LI+ LC+M EA +M
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
+ G+ P TF L D + + G
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAG 454
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 37/343 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L + G+ A + F + +D+ AP YN +++G + +++ R +
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEM--VDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQ 255
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ PNVVTY L+ G CR R+D L+ EM + P+ Y+ + DGL G
Sbjct: 256 MLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGD 315
Query: 195 FEEVSGMMERFL-----------------VCEPG------------------PTMVTYTS 219
+ + L +C+ G PT Y +
Sbjct: 316 SRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNT 375
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GYC+ DL+GA I + M SR P TYN K + +A +L +M +SG
Sbjct: 376 LINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG 435
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P T++ L+ + +L+ V +M+ +G ++ + ++ C+ K EA
Sbjct: 436 VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAV 495
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
A +DMI + +VP+ + + D + + G T A L M S
Sbjct: 496 AILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKS 538
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 151/346 (43%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +L+ RAG ++ + + M+ + + IL D L + G +
Sbjct: 267 TYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD----GFTYSILFDGLTRTGDSRTMLSL 322
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + L + +ILLNG + V AE+ + + P Y TL+ GY
Sbjct: 323 FGE--SLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGY 380
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++R + A + ++M+ I P+ I YN +I+GL + E ++ P++
Sbjct: 381 CQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSV 440
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T+ +L+ Y +AG LE +L M +G + ++ + F K GK+ +A+ +
Sbjct: 441 ETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDD 500
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI P+ Y+ ++ + + A + ++MK G + T +L+ LC+ +
Sbjct: 501 MIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQ 560
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
DEA ++ +GL P +++ + +G T A +L M
Sbjct: 561 IDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM 606
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 6/239 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +TF LI Y RAG +E + K S F ++ + CK G++ A
Sbjct: 439 SVETFNTLIDAYGRAGQLEKCFTVLSDMQD----KGIKSNVISFGSVVKAFCKNGKIPEA 494
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ + P +VYN +++ + S + A +M+ V+ ++ TY L+
Sbjct: 495 VAILDDM--IHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C+ ++D A L+ + +G+ P+ + YNT+I G + +++ +
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT+ TY L+ AG + + + M+ + PS + Y SK ++ M+
Sbjct: 613 PTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKKEMS 671
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ N +++ L+ GR +V + P + V+ AGDL+ A +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 237 LKMMISRGFLPSPT--TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
L+ M P P +YN + GK DA+ ++ +M++ G P+++TY+ ++
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
K L+ ++ +M G ++ T +L+ LCR + DE A ++M ++P
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 355 LTFKRLNDEFKKRG 368
T+ L D + G
Sbjct: 301 FTYSILFDGLTRTG 314
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 58 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 113
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ L+ + ++ +NIL++ + + N++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 114 --QEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYI 171
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + +E + + + LV P V
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGV 231
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A L +M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEM 291
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 292 SLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 351
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ G P T+ + +EF K+G KL M
Sbjct: 352 VDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQ 397
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + W P+V YN L++G+ R ++ + R
Sbjct: 127 FFNILMHRFCKEGNIRVAQSVF----DAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRL 182
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM G+ P + + T+IDG +
Sbjct: 183 KSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCK 242
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GBL+ A ++ M +G P T
Sbjct: 243 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKIT 302
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 303 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 362
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ S ++M R G VP +T+ L
Sbjct: 363 SVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 411
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A+E F + L P + L++G ++ V A + +
Sbjct: 198 YSVLINGLCKEXKMDEANELFDEM--LVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQ 255
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +++ P+++TY TL+ G C+ + +A L+ EM +G +P+ I Y T+IDG + G
Sbjct: 256 MLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGD 315
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +R + V YT+L+ G C+ G A K+L+ M+S G P TY
Sbjct: 316 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTM 375
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
F K G V L ++M G+ P +TY++L+
Sbjct: 376 IINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 41 FAAILETKGTQRSDIXVFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRK---V 96
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + K K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 97 LEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGL 156
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT++ G + G +E + P + TY+ L+ G CK ++ A++
Sbjct: 157 RPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANE 216
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ G +P T+ K G+V+ AM +Y++M+ PD +TY+ L+ LC
Sbjct: 217 LFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC 276
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L A + EM +G D T T LI C+ D A + MI+ + +
Sbjct: 277 KKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 336
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 337 AYTALISGLCQEGRSVDAEKMLREMLSV 364
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +T + + + + + +A + E + +K + L+D CK+G
Sbjct: 262 LPDLITYNTLIYGLCK--KGBLKQAHVLIXEMS-----LKGXKPDKITYTTLIDGCCKEG 314
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E H+++ + ++ Y L++G + DAE+ EM P+ T
Sbjct: 315 DLDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRT 372
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
Y ++ +C+ V +L+KEM+++G P+ + YN +++G
Sbjct: 373 YTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 191/402 (47%), Gaps = 40/402 (9%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFE------------FANNL--DMVKNFDSGAS---- 73
S F ++++ Y G+ + A++ F+ N+L ++VKN ++ +
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214
Query: 74 -------------LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ I++++ CK G+V A+ + K + L P + Y+ L+NG+
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL--GVEPNIVTYHSLINGYV 272
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNA 179
+V+ A+ M ++ V+ NVVTY L++GYC+ ++D A ++++ M++E + P+
Sbjct: 273 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +IDG G+ ++ +++ L + SL+ GYCK G++ A ++
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ P +YN + + G +A NL KM++ G P LTY+ LLK LC+
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A+Q+ M RG D + L+ L +M F+ AS ++D++ RG +TF
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ K G A+++ + M + S + L+D CK
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 171/377 (45%), Gaps = 43/377 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V T+ LI Y G VEAA +F + + +N + + +L+ CKQ +
Sbjct: 259 PNIV---TYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT----YTLLIKGYCKQCK 311
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM------------ 135
+ A + +E + + P R Y +L++G+ R+ + DA R EM
Sbjct: 312 MDEAEKVLRGMQE-EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 370
Query: 136 ---------RKE--------------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
R E N+ P+ +Y TL++GYCR A L +M +
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
EGIEP + YNT++ GL G F++ + + P V Y++L+ G K + EG
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
AS + K +++RGF S T+N K GK+ +A ++ KM + G +PD +TY L+
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
CK + A +V M+ ++ LI L + + E + +M RGL P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610
Query: 353 HYLTFKRLNDEFKKRGM 369
+ +T+ L D + K GM
Sbjct: 611 NIVTYGALIDGWCKEGM 627
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 194/451 (43%), Gaps = 84/451 (18%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++K L + FD A W L++ + PD V T + G+ + + FE
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMMKR---GVAPDEVGYSTLL--------DGLFK--MENFE 489
Query: 58 FANNL---DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS---------- 104
A+ L + + F F ++ LCK G++ A E F K K+L S
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549
Query: 105 -----------------------WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
+P++ +YN L++G F+S+ + + EM +T
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 609
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
PN+VTYG L++G+C+ +D+A EM + G+ N I+ +T++ GL GR +E + +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 202 MERFL------------------------------VCEPG--PTMVTYTSLVKGYCKAGD 229
M++ + C+ P + Y + G CK G
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
++ A + M+ +GF+P TY +S G V++A L +M+ G P+ +TY+
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ LCK + +D A ++ ++ +G ++ T LI C++ D A + MI G
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ P +T+ L + K G + KL N M
Sbjct: 850 ISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 135/292 (46%), Gaps = 4/292 (1%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNV 125
N + + LLD C++G SE F+ K L + PTV YN LL G R
Sbjct: 397 NLKPDSYSYNTLLDGYCREGH---TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
DA + W M K V P+ V Y TL++G ++ + A L K++ G + I +NT+
Sbjct: 454 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I GL + G+ E + ++ P +TY +L+ GYCKA ++ A K+ M
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 573
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
PS YN K ++ + +L +M G TP+ +TY L+ CKE LD A
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
EM G ++ + ++ L R+ + DEA+ + M+ G P + F
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF 685
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 18/278 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPD---FVSKDTFVILIRRYARAGMVEAAIWTFE 57
M+ L + D A L+ + PD F+ D I++ A + ++ + TF
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADS--LDESCKTFL 710
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
NN+ ++ I + LCK G+V A +F + + P Y L++
Sbjct: 711 LPNNI-----------VYNIAIAGLCKTGKVDDARRFFSMLSL--KGFVPDNFTYCTLIH 757
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ + NV +A R EM + + PN+VTY L+ G C+ VDRA RL ++ ++G+ P
Sbjct: 758 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + YNT+IDG + G + + ++ + P++VTY++L+ G CK GD+E + K+L
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
MI G Y + + + G+++ LY M
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 22/340 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQ 85
P+ V T+ LI + + GM++ A F++ +M +N + + ++ L +
Sbjct: 609 TPNIV---TYGALIDGWCKEGMLDKA-----FSSYFEMTENGLSANIIICSTMVSGLYRL 660
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+ A+ +K +D + P + L R ++ E K + PN +
Sbjct: 661 GRIDEAN--LLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNI 715
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGM 201
Y + G C+ +VD A R + +G P+ Y T+I G AG +E M
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ R LV P +VTY +L+ G CK+ +++ A ++ + +G P+ TYN + K
Sbjct: 776 LRRGLV----PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G ++ A L KMIE G +P +TY L+ LCK ++ ++++ +M G D L
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
L+ R + + ++ M R L ++ K+++
Sbjct: 892 YCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQVD 931
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 3/278 (1%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+++PTV ++++L + K+A + M K P++ + +L+ + A
Sbjct: 153 AFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ ++M + GI P+ + + +++ + G+ +E +G +++ P +VTY SL+ G
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 270
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTP 282
Y GD+E A +LK M +G + TY + + K K+++A + R M E+ P
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D Y +L+ C+ K+D A+++ EM G +L LI+ C+ + EA
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
M+ L P ++ L D + + G T+ A LC+ M
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ R F SPT ++ + + + G ++A+ ++ M + G P + + LL L K +
Sbjct: 148 VYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGET 207
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A V ++M G D+ +++++ C+ K DEA+ + M G+ P+ +T+ L
Sbjct: 208 HTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSL 267
Query: 361 NDEFKKRGMTALAQKLCNVMS 381
+ + G A+ + MS
Sbjct: 268 INGYVSLGDVEAAKGVLKFMS 288
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 179/357 (50%), Gaps = 11/357 (3%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
VL +A+ F W L+ + PD ++ T +I++ R A+ V + +F L
Sbjct: 118 VLGRARRFPHMWNLVANT--RRICPDALTPRTAMIVLGRVAKVCSVRETVASFRCLARL- 174
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
D A LF LL +LC++ + A FH L + +NILL+GW K
Sbjct: 175 -FHTVDP-AVLFNALLRTLCQEKSMSDARNVFHA---LKYEFRVNRHTFNILLSGW---K 226
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +DAE F EMR+ V P++VTY +L++ +C+ R V +A +L+ EMR + I P+ I Y
Sbjct: 227 SAEDAEAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDIITYT 286
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL G+ ++ +++ P + Y + ++ + A L A ++ M+S+
Sbjct: 287 SLIGGLGLIGQPDKAKDLLKEMYELGCYPDVPAYNAAIRNFVIAKRLGDAFALMDQMVSK 346
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P+PTTYN FFR + + A LY +M G P+ + ++++ + K+ LA
Sbjct: 347 GLMPNPTTYNLFFRCYYWAFDIGSAWRLYERMRSEGCYPNTQSCMFIIRLCHRYGKVALA 406
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ +M S +L+ LLC K ++A F M+ G P + F+R+
Sbjct: 407 LELWSDMVSSSFGSLTLVSDVLLDLLCDEGKLEDAERCFCQMVELGQKPSNVAFRRI 463
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++S C RV A K +L P + L+ G + + +A + +
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQ--PDTATFTTLIRGIYVEGKIGEALHLFDK 156
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E P+VVTYGTL+ G C++ AIRL+ M ++ +PN YNT+ID L + +
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TY SL+ C + + + +L M+ +P ++N
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV +A ++ KMI+ G P+ +TY L+ C ++D A++V M C+G
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C ++ + LI+ C++ + D+A F +M R+ L+P +T+ L
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 166/361 (45%), Gaps = 12/361 (3%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLF 75
L DK+ G PD V T+ LI + G AAI MV KN +
Sbjct: 153 LFDKMIGEGFRPDVV---TYGTLINGLCKVGNTSAAIRLLG-----SMVQKNCQPNVFAY 204
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
++DSLCK +V A F + + + +P + YN L++ K EM
Sbjct: 205 NTIIDSLCKDRQVTEAFNLF--SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ P+VV++ T+V+ C+ +V A +V +M + G+EPN + Y ++DG
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E + + + P +++Y +L+ GYCK ++ A + M + +P TY+
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+++DA+ L+ +M+ P+ +TY ILL LCK L A+ + K ++
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
D D+ + + I +CR + + A F ++ +GL P T+ + + +RG+ A K
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502
Query: 376 L 376
L
Sbjct: 503 L 503
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 150/303 (49%), Gaps = 4/303 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ + +G++ A F K + + + P V Y L+NG + N A R
Sbjct: 134 FTTLIRGIYVEGKIGEALHLFDKM--IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++N PNV Y T+++ C+ R+V A L EM +GI P+ YN++I L
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ V+ ++ + + P +V++ ++V CK G + A ++ MI RG P+ TY
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++++A+ ++ M+ G P+ ++Y+ L+ CK ++D A+ + EM CR
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM-CRQ 370
Query: 315 CDI-DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
I D T + LIH LC + + +A A F +M+ +P+ +T++ L D K A A
Sbjct: 371 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 430
Query: 374 QKL 376
L
Sbjct: 431 MAL 433
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 33/288 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKR----------------------KELDQS-------- 104
F ++D+LCK+G+V A + K E+D++
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 105 ---WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P V YN L+NG+ + + + A + EM ++ + P+ VTY TL+ G C + R+
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
AI L EM PN + Y ++D L + E +++ P + +
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G C+AG+LE A + + S+G P TY+ + G +++A L+R+M E+G T
Sbjct: 454 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 513
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ Y+ + + + ++ AIQ+ +EM RG D T T+ + +L
Sbjct: 514 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+ +N LL + K+ +M + PN+ T L+ +C L RV A +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G +P+ + T+I G+ G+ E + ++ + P +VTY +L+ G CK
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ A ++L M+ + P+ YN K +V +A NL+ +M+ G +PD T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LC + + EM D+ + ++ LC+ K EA + MI
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 347 RRGLVPHYLTFKRLND 362
+RG+ P+ +T+ L D
Sbjct: 299 QRGVEPNVVTYTALMD 314
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 4/293 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F LL S+ K +K S ++D P + +IL+N + V A
Sbjct: 64 FNKLLTSIAK---MKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLA 120
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++ K P+ T+ TL+ G ++ A+ L +M EG P+ + Y T+I+GL + G
Sbjct: 121 KILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVG 180
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ + P + Y +++ CK + A + M+++G P TYN
Sbjct: 181 NTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 240
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + L +M++S PD ++++ ++ LCKE K+ A V +M R
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
G + ++ T T L+ C + + DEA F+ M+ +G +P+ +++ L + + K
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 10/261 (3%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+ V + L+ +++ + L +M GI PN + +I+ R +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + L P T+T+L++G G + A + MI GF P TY K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G A+ L M++ P+ Y+ ++ LCK+ ++ A + EM +G D+ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
LIH LC + ++ + +M+ ++P ++F + D K G A + + M
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM- 297
Query: 382 SVPRSME--------LLDSRC 394
+ R +E L+D C
Sbjct: 298 -IQRGVEPNVVTYTALMDGHC 317
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 117/253 (46%), Gaps = 13/253 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ +S +T LI Y + ++ A++ F +++ + + L+ LC
Sbjct: 338 MPNVISYNT---LINGYCKIQRIDKAMYLFGEMCRQELIPD----TVTYSTLIHGLCHVE 390
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R++ A FH+ Q P + Y ILL+ +++ + +A + N+ P++
Sbjct: 391 RLQDAIALFHEMVACSQ--IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 448
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
++G CR ++ A L + +G++P+ Y+ +I+GL G +E S +
Sbjct: 449 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE-- 506
Query: 207 VCEPGPTM--VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ E G T+ Y ++ +G+ + + A ++L+ M++RGF +T F + S G
Sbjct: 507 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566
Query: 265 VEDAMNLYRKMIE 277
+ + R+ ++
Sbjct: 567 DQSLKQILREFVQ 579
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 9/206 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + A L + + ++P+ V T+ IL+ + + A+ +
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLV---TYRILLDYLCKNRYLAEAMALLKAIE 438
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N D + I +D +C+ G ++AA + F + P V Y+I++NG
Sbjct: 439 G----SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS--KGLQPDVWTYSIMINGLC 492
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + +A + + EM + T N Y T+ G+ R RAI+L++EM G +A
Sbjct: 493 RRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAS 552
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L + G + + ++ F+
Sbjct: 553 TMTLFVKMLSDDGLDQSLKQILREFV 578
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 161/320 (50%), Gaps = 10/320 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ +RAG + ++ KN + ++++ C+ G V+ ASE
Sbjct: 220 TYTILVDGLSRAGDISKVEAVYDEMKR----KNVAGDVYFYSAVINAYCRGGNVRRASEV 275
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + P R Y L+NG+ + ++ AE +M+ V N + + T+++GY
Sbjct: 276 FDEC--VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
CR V++A+ + M K GIE + YNT+ GL R E+ ++ ++ E G P
Sbjct: 334 CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH--IMAEKGVAP 391
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
V+YT+L+ + K GD+ A ++ + M +G PS TYN + K G + +A
Sbjct: 392 NYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFK 451
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M + G PD TY L+ C K+D+A+++ +EMK RG ++ T L+ L +
Sbjct: 452 KEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKE 511
Query: 333 YKFDEASAEFEDMIRRGLVP 352
+ +EA ++DM+ GL P
Sbjct: 512 GRSEEAFQLYDDMLAAGLTP 531
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 8/309 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L + G + + + K ++ A V Y+ ++N + R NV+ A + E
Sbjct: 221 YTILVDGLSRAGDISKVEAVYDEMKR--KNVAGDVYFYSAVINAYCRGGNVRRASEVFDE 278
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
V PN TYG L+ G+C++ +++ A L+ +M+ G+ N IV+NT+IDG G
Sbjct: 279 CVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGM 338
Query: 195 FE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
E E+ +ME+ + + TY +L G C+ +E A K+L +M +G P+ +
Sbjct: 339 VEKALEIKAVMEKMGIEL---DIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y +K G + +A L+R M G P +TY++++ K + A + KEM+
Sbjct: 396 YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ T L+H C K D A FE+M RG P+ + + L K G +
Sbjct: 456 KKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSE 515
Query: 372 LAQKLCNVM 380
A +L + M
Sbjct: 516 EAFQLYDDM 524
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 129/264 (48%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+++++G+ +S +V DA E+ + V N Y +L++ Y R R D L+KEM
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G+EP Y ++DGL AG +V + + + Y++++ YC+ G++
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
AS++ + G P+ TY F K G++E A L M G +++ ++ ++
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMID 331
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+ ++ A+++ M+ G ++D+ T L LCR+ + ++A M +G+ P
Sbjct: 332 GYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAP 391
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL 376
+Y+++ L K G A++L
Sbjct: 392 NYVSYTTLISIHAKEGDMVEARRL 415
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 18/289 (6%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFE 76
+ D+ GH V ++ T+ LI + + G +EAA DM ++ +F
Sbjct: 275 VFDECVGHGVEP--NERTYGALINGFCKIGQIEAAEMLLA-----DMQLRGVGHNQIVFN 327
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++D C+ G V+ A E +++ + YN L G R ++DA++ M
Sbjct: 328 TMIDGYCRHGMVEKALEIKAVMEKMGIEL--DIYTYNTLACGLCRVNRMEDAKKLLHIMA 385
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++ V PN V+Y TL+ + + + A RL ++M +G P+ + YN +IDG ++ G
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445
Query: 197 EVS----GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
E M ++ LV P + TY LV G+C G ++ A ++ + M RG P+ Y
Sbjct: 446 EAERFKKEMEKKGLV----PDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAY 501
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+K G+ E+A LY M+ +G TPD Y +L+ L + + D
Sbjct: 502 TALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 40/254 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLD----KIGGHEVPDFVSKDTFVILIRRYARAGMVEAA---- 52
+I K + ++A LL D +G +++ F +I Y R GMVE A
Sbjct: 294 LINGFCKIGQIEAAEMLLADMQLRGVGHNQI-------VFNTMIDGYCRHGMVEKALEIK 346
Query: 53 -----------IWTFE-FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE 100
I+T+ A L V + L I+ + V + KE
Sbjct: 347 AVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKE 406
Query: 101 LDQSWA-------------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
D A P+V YN++++G+ ++ ++++AERF EM K+ + P++ TY
Sbjct: 407 GDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTY 466
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
LV G+C +VD A+RL +EM+ G +PN + Y ++ GL + GR EE + + L
Sbjct: 467 AGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLA 526
Query: 208 CEPGPTMVTYTSLV 221
P Y+ LV
Sbjct: 527 AGLTPDDTLYSVLV 540
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+ V+DG ++G ++ G+++ G Y SL+ Y + + + + +LK M +
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
RG P+ TY S+ G + +Y +M D Y ++ C+ +
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A +V E G + + T LI+ C++ + + A DM RG+ + + F + D
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMID 331
Query: 363 EFKKRGMTALAQKLCNVM 380
+ + GM A ++ VM
Sbjct: 332 GYCRHGMVEKALEIKAVM 349
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 188/383 (49%), Gaps = 11/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I+V+ K DSA + + + G ++ DF F L+ Y +G V A+ F
Sbjct: 35 LIQVVVSRKGKDSASDVFEAILETKGTQISDFY---VFSGLMIAYLESGFVRDAVQCFRL 91
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ FD+ + E L++ K +++ ++ L+ + ++ +NIL+
Sbjct: 92 TKQHKIRVPFDTCRKVLEHLMEFR----YFKLVWDFY--KEVLECGYPASLYFFNILMQR 145
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + ++ A+ + + K + P+VV++ TL+ GY +L +D RL M G +P+
Sbjct: 146 FCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPD 205
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y+ +I+GL + G+ +E + + L P VT+T+L+ G+CK ++ A +I K
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+S+G P TYN K G+++ +L +MI +G PD+++Y L+ CKE
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L++A+++ +M +D T LI LCR + +A +M+ GL P T+
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYT 385
Query: 359 RLNDEFKKRGMTALAQKLCNVMS 381
+ +EF K+ + A KL M
Sbjct: 386 MIINEFCKKRDSKTASKLLREMQ 408
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + W P+V +N L+NG+ + ++ + R
Sbjct: 138 FFNILMQRFCKEGEMRLAQSVF----DAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M P+V TY L+ G C+ ++D A L EM G+ PN + + T+I G +
Sbjct: 194 KSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ + + ++ L P ++TY +L+ G CK G+L+ ++ MI G P +
Sbjct: 254 NEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKIS 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A+ L KMI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ AS +M R G VP +T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 140/280 (50%), Gaps = 8/280 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL++R+ + G + A F+ + + S F L++ K G + E F
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVS----FNTLINGYIKLGDL---DEGF 191
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + S A P V Y+IL+NG + + +A + EM + PN VT+ TL+ G+
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +VD A+ + K+M +G+ P+ I YNT+I GL + G ++V +++ ++ P
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
++YT+L+ G CK GDLE A ++ MI Y + G+ DA + R+
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLRE 371
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
M+ G PD TY +++ CK+ A ++ +EM+ G
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K ++ G+ S +N + F K G++ A +++ + + G P ++++ L+ K
Sbjct: 125 KEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKL 184
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LD ++ M G D+ T ++LI+ LC+ K DEA+ F +M+ GLVP+ +TF
Sbjct: 185 GDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTF 244
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
L K LA ++ M S S +L+
Sbjct: 245 TTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLI 277
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 15/337 (4%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTF-----EFANNLDMVKNFDSGASLFEILLDSLCK 84
F+ K+ F+++ + Y +A + E A+ F EF VK+F+S +L+ + +
Sbjct: 94 FLEKN-FIVMFKAYGKAHLPEKAVDLFHRMWGEFQCK-QTVKSFNS-------VLNVIVQ 144
Query: 85 QGRVKAASEYF-HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+G A E++ H + P +N+++ R V A + E+ N P+
Sbjct: 145 EGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPD 204
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
TY TL+ G C+ R+D A+ L+ EM+ EG PN + +N +I L + G + +++
Sbjct: 205 NYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVD 264
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P VTY +LV G C G LE A +L M+S +P+ T+ F G
Sbjct: 265 NMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQG 324
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ D + + G+ + Y L+ LCKE K + A+++ KEM +GC + +
Sbjct: 325 RASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYS 384
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LI LCR K DEA +M +G +P+ T+ L
Sbjct: 385 ALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSL 421
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 168/379 (44%), Gaps = 35/379 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFE----------------FANNLDMVKNFDSGASL---- 74
TF ++I+ R G+V+ AI F + L + D SL
Sbjct: 172 TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM 231
Query: 75 -----------FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
F +L+ +LCK+G + A++ + P YN L++G
Sbjct: 232 QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNM--FLKGCVPNEVTYNALVHGLCLKG 289
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ A +M PN VT+GTL+ G+ R R++ + G N VY+
Sbjct: 290 KLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYS 349
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL + G+F + + + + GP + Y++L+ G C+ G L+ A L M ++
Sbjct: 350 SLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNK 409
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G+LP+ TY+ R + + G A+ ++++M + + + Y IL+ LCK+ K A
Sbjct: 410 GYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEA 469
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV--PHYLTFKRLN 361
+ V K+M RG +D+ + +IH C ++ F M+ +G V P +T+ L
Sbjct: 470 LMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILL 529
Query: 362 DEFKKRGMTALAQKLCNVM 380
+ F + A + N+M
Sbjct: 530 NAFCIQKSIFRAIDILNIM 548
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 152/377 (40%), Gaps = 46/377 (12%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A LL + P+ V+ F +LI + G + A + +N+
Sbjct: 215 LCKEERIDEAVSLLDEMQVEGTFPNLVA---FNVLISALCKKGDLGRAA---KLVDNM-F 267
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+K + L+ LC +G+++ A ++ + P + L+NG+
Sbjct: 268 LKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM--VSNKCVPNDVTFGTLINGFVMQGR 325
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
D R + + N Y +L+ G C+ + ++A+ L KEM +G PN IVY+
Sbjct: 326 ASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSA 385
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD--------------- 229
+IDGL G+ +E G + P TY+SL++GY +AGD
Sbjct: 386 LIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNN 445
Query: 230 -----------LEGASK---------ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
+ G K + K M+SRG Y+ F VE +
Sbjct: 446 CIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGL 505
Query: 270 NLYRKMIESG--YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
L+ +M+ G PD +TY+ILL C + + AI + M +GCD D T + +
Sbjct: 506 KLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLK 565
Query: 328 LLCRMYKFDEASAEFED 344
L + EF D
Sbjct: 566 TLRENMNPPQDGREFLD 582
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE- 173
L+ S + + E +M++E + + + Y + ++A+ L M E
Sbjct: 67 LIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEF 126
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP---GPTMVTYTSLVKGYCKAGDL 230
+ +N+V++ +V+ G F + + P +T+ ++K C+ G +
Sbjct: 127 QCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLV 186
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++ + + R P TY+ K ++++A++L +M G P+ + +++L
Sbjct: 187 DKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVL 246
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK+ L A ++ M +GC + T L+H LC K ++A + M+
Sbjct: 247 ISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKC 306
Query: 351 VPHYLTFKRLNDEFKKRG 368
VP+ +TF L + F +G
Sbjct: 307 VPNDVTFGTLINGFVMQG 324
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ T+N + + G V+ A+ ++R++ PD TY L+ LCKE+++D A+ +
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM+ G +L +LI LC+ A+ ++M +G VP+ +T+ L
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287
Query: 367 RGMTALAQKLCNVMSS 382
+G A L N M S
Sbjct: 288 KGKLEKAVSLLNQMVS 303
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTF-EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ L+R Y AG AI + E ANN N + IL++ LCK G+ A
Sbjct: 417 TYSSLMRGYFEAGDSHKAILVWKEMANN-----NCIHNEVCYSILINGLCKDGKFMEALM 471
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN--VTPNVVTYGTLV 151
+ ++ L + V Y+ +++G+ + V+ + + +M + V P+V+TY L+
Sbjct: 472 VW--KQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILL 529
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+C + + RAI ++ M +G +P+ I + + L E + P
Sbjct: 530 NAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLREN--------------MNPPQ 575
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
LV K GASKI+++M+ + LP +T+ + K V A++
Sbjct: 576 DGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAIS 634
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 13/380 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ LA A + D L L ++ VP ++ V + +ARAG + A+ TF A +
Sbjct: 62 VRRLAAAGDVDGVQ-LALQEMRLRGVP--CTEGALVAAVGAFARAGAPDRALKTFYRAVH 118
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAAS-EYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ + L+ L+D+L ++ V A Y + RK+ P V YN+L+
Sbjct: 119 -DLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKD---GVHPNVFTYNLLVRALC 174
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V A + EM ++ P+ VTY T+V C+L R+D A ++ M P A
Sbjct: 175 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAA 229
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN ++ L R +EV ++ + P ++TYT++V +CKAG+L A IL M
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 289
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P+ T+ R G+V DA++++R M+ G+ P ++Y+IL++ LC L
Sbjct: 290 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 349
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + M+ GC ++ T + LI + A + + DM R G P+ + + +
Sbjct: 350 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 409
Query: 361 NDEFKKRGMTALAQKLCNVM 380
D F K+ M A+ L + M
Sbjct: 410 VDVFCKKLMFNQAKSLIDKM 429
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 141/309 (45%), Gaps = 9/309 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ LCK R+ A+E + P YN ++ R +++ +
Sbjct: 201 YATIVSVLCKLDRLDEATEVL-------AAMPPVAASYNAIVLALCREFRMQEVFSVVSD 253
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNV+TY T+V+ +C+ + A ++ M G PN + + ++ GL + GR
Sbjct: 254 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 313
Query: 195 FEEVSGMMERFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ M R++V E P+ V+Y L++G C GDL+GAS IL M G P+ TY+
Sbjct: 314 VHDALDMW-RWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYS 372
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
FSK G + A++++ M SG P+ + Y ++ + CK+ + A + +M
Sbjct: 373 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 432
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
C + T LI LC + A F +M R G VP+ T+ L + G A
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 492
Query: 374 QKLCNVMSS 382
+ M S
Sbjct: 493 LHMVTEMQS 501
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 155/362 (42%), Gaps = 13/362 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI--WTFEF 58
++ KA E A +L + P+ V TF L+R G V A+ W +
Sbjct: 269 IVDAFCKAGELRMACAILARMVITGCTPNVV---TFTALVRGLFDDGRVHDALDMWRWMV 325
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A + + + IL+ LC G +K AS + ++ P VR Y+ L++G
Sbjct: 326 A------EGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ--HGCFPNVRTYSTLIDG 377
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++ ++ A W +M + PNVV Y +V+ +C+ ++A L+ +M E PN
Sbjct: 378 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 437
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ +NT+I L + R G+ P TY L+ G + G+ A ++
Sbjct: 438 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 497
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M S G S TYN + +AM KMI G P+ T+ ++ CKE
Sbjct: 498 EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 557
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ +A + M C ++ T+L+ LC K +A M+ G+ P+ +T+
Sbjct: 558 EVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWN 617
Query: 359 RL 360
L
Sbjct: 618 VL 619
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 3/322 (0%)
Query: 63 DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
DMV + + ++D+ CK G ++ A + + P V + L+ G F
Sbjct: 253 DMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM--VITGCTPNVVTFTALVRGLFD 310
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
V DA W M E P+ V+Y L+ G C + + A ++ M + G PN
Sbjct: 311 DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRT 370
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y+T+IDG +AG + P +V YT++V +CK A ++ M+
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 430
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
P+ T+N R +V A+ ++ +M G P+ TY+ L+ L +E
Sbjct: 431 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 490
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A+ + EM+ G ++ L T ++ LC+ EA MI +G+ P+ TF +
Sbjct: 491 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 550
Query: 362 DEFKKRGMTALAQKLCNVMSSV 383
+ K G +A + M+ V
Sbjct: 551 HAYCKEGEVRMAAWMLGAMNVV 572
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+++N F L+ SLC RV A FH+ + P R YN L++G FR
Sbjct: 430 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR--HGCVPNGRTYNELIHGLFREG 487
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N DA EM+ + ++VTY T+V G C+ R A+ V +M +GI+PNA ++
Sbjct: 488 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFS 547
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I + G + M+ V ++ YT L+ C L A L M+
Sbjct: 548 AIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYE 607
Query: 244 GFLPSPTTYNYFFR-YFSKFGKVEDA 268
G P+ T+N R F G +E +
Sbjct: 608 GIYPNTVTWNVLVRGVFRNLGCIEPS 633
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 75 FSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 SMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A +L EM + + PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A+ ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A++ F + L ++ P + L++G ++ V A + +
Sbjct: 215 YSVLINGLCKENKMDDANKLFDEM--LVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 272
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +++ P+++TY TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGD 332
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +R + V YT+L+ G C+ G A K+L+ M+S G P TY
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 392
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
F K G V L ++M G+ P +TY++L+
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G +E + L P + TY+ L+ G CK ++ A+K+ M+ + +P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGV 248
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+ L A + EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G D T T LI C+ D A + MI+ + + + L + G +
Sbjct: 309 SMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 369 VDAEKMLREMLSV 381
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 128/279 (45%)
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+AS F E + + V++ L+ G+ S ++DA + R+ + T
Sbjct: 53 SASAVFAAILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRK 112
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++E +L+ +E+ + G + +N ++ + G + +
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P++V+Y +L+ GY + GDL+ ++ M++ G P TY+ K K++DA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDAN 232
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ P+ +T+ L+ CK ++DLA+++ K+M + DL T LI+ L
Sbjct: 233 KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ +A+ ++M +GL P +T+ L D K G
Sbjct: 293 CKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEG 331
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 109/239 (45%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ + L+ GY + AI + R+ + V++ L++ F+ V G
Sbjct: 71 DIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E L C ++ + L+ +CK GD+ A + + G PS +YN + +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G +++ L M+ SG PD TY +L+ LCKE+K+D A ++ EM + + T
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF 250
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T LI C+ + D A ++ M+ + L+P +T+ L K+G A L + MS
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMS 309
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 279 LPDLITYNT---LIYGLCKKGDLKQA---NDLIDEMSM-KGLQPDKITYTTLIDGCCKEG 331
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E H+++ + ++ Y L++G + DAE+ EM + P+ T
Sbjct: 332 DLDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDART 389
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
Y ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 173/355 (48%), Gaps = 14/355 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN--FDSGASLFEILLDSLCKQGRVK 89
S TF I+ RYA AG + A+ F L+M ++ F AS F +LD LCK RV+
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLF-----LNMHEHGCFQDLAS-FNTILDVLCKSKRVE 178
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E F + L ++ YN++LNGW K A EM + + PN+ TY T
Sbjct: 179 KAYELF---RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+++G+ R ++ A EM+K E + + Y TV+ G AG + + + +
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P++ TY ++++ CK ++E A + + M+ RG+ P+ TTYN R G+
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH-L 328
L ++M G P+ TY+++++ + +++ A+ + ++M C +LDT +LI +
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 329 LCRMYKFDEASAE--FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
R D A +M+ RG +P TF R+ + G A A+++ + S
Sbjct: 416 FVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQS 470
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P+ T+ + E Y + D+A++L M + G + +NT++D L ++ R
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ + R L VTY ++ G+C A ++LK M+ RG P+ TTYN
Sbjct: 177 VEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F + G++ A + +M + D +TY ++ ++ A V EM G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T +I +LC+ + A FE+M+RRG P+ T+ L
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 24/281 (8%)
Query: 13 SAWCLLLDKIGGHEV----------PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ WCL+ EV P+ + +T +++ + RAG + A W F L
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNT---MLKGFFRAGQIRHA-WEF----FL 254
Query: 63 DMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+M K + + + ++ G +K A F + + + P+V YN ++ +
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM--IREGVLPSVATYNAMIQVLCK 312
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
NV++A + EM + PNV TY L+ G R L++ M EG EPN
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC---KAGDLEGASKILK 238
YN +I E E+ G+ E+ + P + TY L+ G ++ D+ A K+L
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLL 432
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
M+ RGF+P T+N G A + R +SG
Sbjct: 433 EMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 36/266 (13%)
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++F L + TPN+V L + + + + +E + +A ++ ID
Sbjct: 43 DQFLLSTKTTPWTPNLVN-SVLKRLWNHGPKALQFFHFLDNHHREYVH-DASSFDLAIDI 100
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
V ++ R GP+ T+ + + Y AG + A K+ M G
Sbjct: 101 AARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQD 160
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYR----------------------------------K 274
++N K +VE A L+R +
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKE 220
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E G P+ TY+ +LK + ++ A + EMK R C+ID+ T T ++H +
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
A F++MIR G++P T+ +
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAM 306
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 28/334 (8%)
Query: 75 FEILLDSLCKQGRVKAASEYFH----------------------------KRKELDQSWA 106
+ ILL+ LC + R + A E H K LDQ +
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKMLDQRIS 113
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V YN ++ +++ V A M K V P+ +TY ++V G+C + AI
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 173
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+K+MR +G+EP+ + YN+++D L + GR E + + P + TY +L++GY
Sbjct: 174 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L +L +M+ G P+ ++ ++K KVE+AM ++ KM + G P+ +T
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ +LCK +++ A+ ++M G D LIH LC K+++A F +M+
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG+ + F + D K G + KL ++M
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 2/285 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ +LCK V A E + P YN +++G+ S K+A F +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTM--VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKK 176
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + V P+VVTY +L++ C+ R A ++ M K G++P+ Y T++ G G
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ G+++ + P ++ LV Y K +E A + M +G P+ TY
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+VEDAM + +MI+ G PD + Y+ L+ LC DK + A ++ EM RG
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ +I C+ + E+ F+ M+R G+ P +T R
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGR 401
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 30/295 (10%)
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA-------------------------ER 130
H EL + P V YNILLNG ++A
Sbjct: 38 HVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 131 FWLE-----MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
F+ E M + ++PNVVTY +++ C+ + VD+A+ ++ M K G+ P+ + YN++
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ G +G+ +E +++ P +VTY SL+ CK G A KI M RG
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TTY + ++ G + + L M+ +G P+ + IL+ K++K++ A+
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
V +M+ +G + + T +I +LC+ + ++A FE MI GL P + + L
Sbjct: 278 VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 10/244 (4%)
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE--PNAIVYN 183
+DA + E+ + + P+V +Y L+ G C R A+ L+ M +G + P+ + Y+
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
TVI+G + G ++ M+++ + P +VTY S++ CKA ++ A ++L M+
Sbjct: 93 TVINGFFKEGDLDK---MLDQRI----SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TYN F G+ ++A+ +KM G PD +TY+ L+ LCK + A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ M RG D+ T L+ E + M+R G+ P++ F L
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265
Query: 364 FKKR 367
+ K+
Sbjct: 266 YAKQ 269
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTYT 218
A + E+ + GI P+ YN +++GL + R +E ++ ++ + G P +V+Y+
Sbjct: 36 ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLH--IMADDGGDCPPDVVSYS 92
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G+ K GDL+ K+L IS P+ TYN K V+ AM + M++S
Sbjct: 93 TVINGFFKEGDLD---KMLDQRIS----PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY+ ++ C + AI K+M+ G + D+ T L+ LC+ + EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM 247
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F IL+ YA+ VE A+ F + + A + ++D LCK GRV+ A Y
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQ----QGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +D+ P VYN L++ + AE +LEM + + + + ++++ +
Sbjct: 314 FEQM--IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 371
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAI 180
C+ RV + +L M + G++P+ I
Sbjct: 372 CKEGRVIESGKLFDLMVRIGVKPDII 397
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYNYFFRYFSKFGKVEDAM 269
P + +Y L+ G C + A ++L +M G P +Y+ F K G ++
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD--- 105
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
KM++ +P+ +TY+ ++ LCK +D A++V M G D T ++H
Sbjct: 106 ----KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
C + EA + M G+ P +T+ L D K G A+K+ + M+
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 168/370 (45%), Gaps = 40/370 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y G VEAA +F + + +N + + +L+ CKQ ++ A +
Sbjct: 263 TYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT----YTLLIKGYCKQCKMDEAEKV 318
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM------------------- 135
+E + + P R Y +L++G+ R+ + DA R EM
Sbjct: 319 LRGMQE-EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377
Query: 136 --RKE--------------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R E N+ P+ +Y TL++GYCR A L +M +EGIEP
Sbjct: 378 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 437
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT++ GL G F++ + + P V Y++L+ G K + EGAS + K
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+++RGF S T+N K GK+ +A ++ KM + G +PD +TY L+ CK
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ A +V M+ ++ LI L + + E + +M RGL P+ +T+
Sbjct: 558 VGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGA 617
Query: 360 LNDEFKKRGM 369
L D + K GM
Sbjct: 618 LIDGWCKEGM 627
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 190/402 (47%), Gaps = 40/402 (9%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFE------------FANNL--DMVKNFDSGAS---- 73
S F ++++ Y G+ + A++ F+ N+L ++VKN ++ +
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214
Query: 74 -------------LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ I++++ CK G+V A+ + K + L P + Y+ L+NG+
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL--GVEPNIVTYHSLINGYV 272
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNA 179
+V+ A+ M ++ V+ NVVTY L++GYC+ ++D A ++++ M++E + P+
Sbjct: 273 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y +IDG G+ ++ +++ L + SL+ GYCK G++ A ++
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ P +YN + + G +A NL KM++ G P LTY+ LLK LC+
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A+Q+ M G D + L+ L +M F+ AS ++D++ RG +TF
Sbjct: 453 FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ K G A+++ + M + S + L+D CK
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 195/451 (43%), Gaps = 84/451 (18%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++K L + FD A W L++ K G PD V T + G+ + + FE
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMM-KXG--VAPDEVGYSTLL--------DGLFK--MENFE 489
Query: 58 FANNL---DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS---------- 104
A+ L + + F F ++ LCK G++ A E F K K+L S
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549
Query: 105 -----------------------WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
+P++ +YN L++G F+S+ + + EM +T
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLT 609
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
PN+VTYG L++G+C+ +D+A EM + G+ N I+ +T++ GL GR +E + +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 202 MERFL------------------------------VCEPG--PTMVTYTSLVKGYCKAGD 229
M++ + C+ P + Y + G CK G
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
++ A + M+ +GF+P TY +S G V++A L +M+ G P+ +TY+
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ LCK + +D A ++ ++ +G ++ T LI C++ D A + MI G
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ P +T+ L + K G + KL N M
Sbjct: 850 ISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 142/311 (45%), Gaps = 6/311 (1%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNV 125
N + + LLD C++G SE F+ K L + PTV YN LL G R
Sbjct: 397 NLKPDSYSYNTLLDGYCREGH---TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
DA + W M K V P+ V Y TL++G ++ + A L K++ G + I +NT+
Sbjct: 454 DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I GL + G+ E + ++ P +TY +L+ GYCKA ++ A K+ M
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXI 573
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
PS YN K ++ + +L +M G TP+ +TY L+ CKE LD A
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
EM G ++ + ++ L R+ + DEA+ + M+ G P + F L + +
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF--LKSDIR 691
Query: 366 KRGMTALAQKL 376
+ +A L
Sbjct: 692 YAAIQKIADSL 702
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 18/247 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPD---FVSKDTFVILIRRYARAGMVEAAIWTFE 57
M+ L + D A L+ + PD F+ D I++ A + ++ + TF
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADS--LDESCKTFL 710
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
NN+ ++ I + LCK G+V A +F + + P Y L++
Sbjct: 711 LPNNI-----------VYNIAIAGLCKTGKVDDARRFFSMLSL--KGFVPDNFTYCTLIH 757
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ + NV +A R EM + + PN+VTY L+ G C+ VDRA RL ++ ++G+ P
Sbjct: 758 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N + YNT+IDG + G + + ++ + P++VTY++L+ G CK GD+E + K+L
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877
Query: 238 KMMISRG 244
MI G
Sbjct: 878 NQMIKAG 884
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 96/186 (51%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P VYNI + G ++ V DA RF+ + + P+ TY TL+ GY VD A RL
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM + G+ PN + YN +I+GL ++ + + + P +VTY +L+ GYCK
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+++ A K+ MI G PS TY+ K G +E +M L +MI++G +
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891
Query: 287 YHILLK 292
Y L++
Sbjct: 892 YCTLVQ 897
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 19/310 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI + + GM++ A F++ +M +N + + ++ L + GR+ A+
Sbjct: 614 TYGALIDGWCKEGMLDKA-----FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN- 667
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+K +D + P + L R ++ E K + PN + Y + G
Sbjct: 668 -LLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAG 723
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCE 209
C+ +VD A R + +G P+ Y T+I G AG +E M+ R LV
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV-- 781
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +VTY +L+ G CK+ +++ A ++ + +G P+ TYN + K G ++ A
Sbjct: 782 --PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAF 839
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L KMIE G +P +TY L+ LCK ++ ++++ +M G D L L+
Sbjct: 840 KLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGG 899
Query: 330 CRMYKFDEAS 339
+ ++E S
Sbjct: 900 FKTSNYNEMS 909
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 3/278 (1%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+++PTV ++++L + K+A + M K P++ + +L+ + A
Sbjct: 153 AFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ ++M + GI P+ + + +++ + G+ +E +G +++ P +VTY SL+ G
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 270
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYTP 282
Y GD+E A +LK M +G + TY + + K K+++A + R M E+ P
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D Y +L+ C+ K+D A+++ EM G +L LI+ C+ + EA
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
M+ L P ++ L D + + G T+ A LC+ M
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ R F SPT ++ + + + G ++A+ ++ M + G P + + LL L K +
Sbjct: 148 VYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGET 207
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A V ++M G D+ +++++ C+ K DEA+ + M G+ P+ +T+ L
Sbjct: 208 HTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSL 267
Query: 361 NDEFKKRGMTALAQKLCNVMS 381
+ + G A+ + MS
Sbjct: 268 INGYVSLGDVEAAKGVLKFMS 288
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 165/358 (46%), Gaps = 36/358 (10%)
Query: 39 LIRRYARAGMVEAAIWTFEF-ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
L+++ G + FEF A + D + F S +F+ L+ S C R A E F+
Sbjct: 119 LLKQALGGGTTNSIREIFEFLAASRDRL-GFKSSI-VFDYLIKSCCDMNRADEAFECFYT 176
Query: 98 RKE----------------------LDQSWA-----------PTVRVYNILLNGWFRSKN 124
KE + +W +V +NI++N +
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+K A+ F M V PN+VTY T+V GYC RV+ A ++ M+++ IEP++ Y +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G+ + GR EE S + E + P+ V Y +L+ G+C G+L+ AS M+ +G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ +TYN + ++A + +++ E G +PD +TY+IL+ C+ A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ EM G T T L+H+L + + EA F+ + G++P + F L D
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 159/324 (49%), Gaps = 8/324 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI + G +E A FE +MV K A ++ L+D C +G + AS
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFE-----EMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
Y K + L + +PT+ YN L++ F + +AE E++++ ++P+ +TY L+ G
Sbjct: 348 Y--KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YCR +A L EM GI+P Y +++ L + R +E + ++ P
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++ + +L+ G+C +++GA ++LK M P T+N + + GKVE+A L+
Sbjct: 466 VIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G PD ++++ L+ + + A +V EM G + + T L+ LC+
Sbjct: 526 EMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQ 585
Query: 334 KFDEASAEFEDMIRRGLVPHYLTF 357
+ D A ++M+ +G+ P T+
Sbjct: 586 EGDLAEELLKEMVSKGMTPDDTTY 609
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 157/334 (47%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF I+I + G ++ A +F +++ + ++ C GRV+AA
Sbjct: 223 TFNIMINVLCKEGKLKKAK---DFVGHME-TSGVKPNIVTYNTIVHGYCSSGRVEAADAI 278
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K Q P Y L++G + +++A + + EM ++ + P+ V Y TL++G+
Sbjct: 279 LTTMKR--QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C +D A EM K+GI P YN++I L R +E M++ P
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY L+ GYC+ + + A + M++ G P+ TY SK ++++A +L++K
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G PD + ++ L+ C + A ++ K+M D T ++ CR K
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA F++M RRG+ P +++F L + +RG
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV----PDFVSKDTFVILIRRYARAGMVEAAIWTF 56
MI VL K + A D +G E P+ V+ +T ++ Y +G VEAA
Sbjct: 227 MINVLCKEGKLKKAK----DFVGHMETSGVKPNIVTYNT---IVHGYCSSGRVEAADAIL 279
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ + + + L+ +CKQGR++ AS+ F + + + P+ +YN L+
Sbjct: 280 TTMKR----QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM--VQKGLRPSAVIYNTLI 333
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ N+ A + EM K+ ++P + TY +L+ +R D A ++KE++++GI
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+AI YN +I+G ++ + + L PT TYTSL+ K ++ A +
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K + S G LP +N V+ A L + M PD +T++ +++ C+
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E K++ A ++ EMK RG D + LI R +A +M+ G P LT
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L K LA++L M S
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVS 599
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 13/254 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--F 58
+I L + D A C++ + PD + T+ ILI Y R + A +
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAI---TYNILINGYCRCANAKKAFLLHDEML 423
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A+ + K + LL L K+ R+K A + F +K + P V ++N L++G
Sbjct: 424 ASGIKPTKK------TYTSLLHVLSKKNRMKEADDLF--KKITSEGVLPDVIMFNALIDG 475
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ NVK A +M + V P+ VT+ T+++G+CR +V+ A L EM++ GI+P+
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
I +NT+I G G ++ + L PT++TY +LV+G CK + + A ++LK
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 239 MMISRGFLPSPTTY 252
M+S+G P TTY
Sbjct: 596 EMVSKGMTPDDTTY 609
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%)
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+ + L+K C + A + M +G LP+ T N F K + E A LY +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M T++I++ +LCKE KL A M+ G ++ T ++H C +
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ A A M R+ + P T+ L K+G A K+
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI 313
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 154/306 (50%), Gaps = 13/306 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYF-HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+ LC + + + A E H + + +P V YN +++G+F+ V A +
Sbjct: 165 YNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFH 224
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + P+VVTY +L++G C+ + +D+A+ +++ M +G+ P+ YN +I G G
Sbjct: 225 EMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLG 284
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ EE ++++ P +VTY+ L++ YCK G A + M+ +G P+ T Y+
Sbjct: 285 QLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 344
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
++ G + D +L MI G + ++IL+ K +D A+ EM+
Sbjct: 345 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQN 404
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D+ + + +IH+LC+ + ++A F M+ GL P+ ++F T+L
Sbjct: 405 GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF------------TSLI 452
Query: 374 QKLCNV 379
LC++
Sbjct: 453 HGLCSI 458
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 2/300 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D K+G V A FH+ + Q P V YN L++G +++ + A
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEM--MGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQH 260
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V P+ TY ++ GYC L +++ A+RL+K+M G++P+ + Y+ +I + GR
Sbjct: 261 MFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGR 320
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P Y L+ GY G L +L +MI G +N
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K G V+ AM + +M ++G PD ++Y ++ ILCK +++ A+ +M G
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ + T LIH LC + ++ + +MI RG+ P + + D K G AQ
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 159/330 (48%), Gaps = 37/330 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ + K G V A F + ++ P V Y+ +++ ++ V+DA + +
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQ--NGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQ 435
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E ++PN++++ +L+ G C + + L EM GI P+AI NT++D L + GR
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P +V+Y +L+ GYC G ++ + K L M+S G P TYN
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 255 FFRYFSKFGKVEDAMNLYR-----------------------------------KMIESG 279
+ K G+VEDA+ LYR KM++ G
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
TY+ +L LC+ +D A+++ ++++ + ++D+ T +++I+ L ++ + DEA
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
+ F M+ RG VP +T+ + + G+
Sbjct: 676 SLFSAMVLRGPVPDVITYSLMIKSHIEEGL 705
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 11/250 (4%)
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGR 194
R +NVT N L++G C R D A+ +V + M + G P+ YN +I GL +
Sbjct: 123 RVQNVTLN-----QLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKK 177
Query: 195 FEEVSGMMERFLVCEPG----PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+E ++ + + G P +V+Y +++ G+ K G+++ A + M+ +G P
Sbjct: 178 SQEALELLIH-MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVV 236
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K ++ A+ + + M + G PD TY+I+++ C +L+ A+++ K+M
Sbjct: 237 TYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM 296
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G D+ T ++LI C++ + EA + F+ M+R+G P+ + L + +G
Sbjct: 297 SGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 356
Query: 371 ALAQKLCNVM 380
+ L ++M
Sbjct: 357 IDVRDLLDLM 366
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 44/326 (13%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS T + ++ + G VE A++ F + + N S F L+ LC G
Sbjct: 408 PDVVSYSTVIHIL---CKTGRVEDAVYHFNQMVSEGLSPNIIS----FTSLIHGLCSIGE 460
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
K E + +++ P N +++ + V +A+ F+ + V P+VV+Y
Sbjct: 461 WKKVEELAFEM--INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSY 518
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++GYC + ++D +I+ + M G+ P++ YN++++G + GR E+ +
Sbjct: 519 NTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFR 578
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF----------- 256
+ +T ++ G +AG + A ++ M+ RG TYN
Sbjct: 579 KDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDE 638
Query: 257 -----------------RYFS-------KFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
R FS K G++++A +L+ M+ G PD +TY +++K
Sbjct: 639 ALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIK 698
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDID 318
+E L+ + + M+ GC D
Sbjct: 699 SHIEEGLLEESDNLFLSMEKNGCAAD 724
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 13/292 (4%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKD-------AERFWLEMRKENVTPNVVTYGTLVEG 153
L Q+ +V +N +L R+ + A + M + V G L+
Sbjct: 41 LPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRC 100
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-- 211
+C + R+D A K G + N +I GL + R ++ M+ R + E G
Sbjct: 101 FCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMP-ELGYT 159
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL---PSPTTYNYFFRYFSKFGKVEDA 268
P + +Y +L+KG C + A ++L M + G P+ +YN F K G+V+ A
Sbjct: 160 PDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKA 219
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
L+ +M+ G PD +TY+ L+ LCK +D A+ + + M +G D T ++I
Sbjct: 220 YFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRG 279
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C + + +EA + M GL P +T+ L + K G A A+ + + M
Sbjct: 280 YCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS +T LI Y G ++ +I + ++ + + + + LL+ K GR
Sbjct: 513 PDVVSYNT---LIDGYCFVGKMDESIKQLDRMVSIGLRPD----SWTYNSLLNGYFKNGR 565
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ A + + D + NI+L+G F++ + A +++M + TY
Sbjct: 566 VEDALALYREMFRKDVKFCAITS--NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETY 623
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T++ G C VD A+R+ +++R + E + ++ VI+ L++ GR +E + ++
Sbjct: 624 NTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVL 683
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P P ++TY+ ++K + + G LE + + M G N R + G V
Sbjct: 684 RGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRR 743
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKE 297
A K+ E ++ + T +L+ I+ ++
Sbjct: 744 AGTYLTKIDEKNFSLEASTAALLIPIVSEK 773
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 4/224 (1%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ L M + G+ A + +I GR + FL VT L+K
Sbjct: 75 AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 223 GYCKAGDLEGA-SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGY 280
G C + A + + M G+ P +YN + K ++A+ L M + GY
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 281 --TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
+P+ ++Y+ ++ KE ++D A + EM +G D+ T LI LC+ D+A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
A + M +G++P T+ + + G A +L MS
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 298
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 16/360 (4%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----------------FEILLDSL 82
+ R RAG+ I F L K D + + ++ SL
Sbjct: 146 FVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSL 205
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C R + A + + + +P V +N +++G+F+ V A + EM ++ V P
Sbjct: 206 CGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVP 265
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V TY ++V+ C+ R +D+A ++++M +G+EP+ + YN +I G +G ++E + M
Sbjct: 266 DVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMF 325
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P VT++S + CK G + A +I + M ++G +P +Y+ ++
Sbjct: 326 RKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATE 385
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+ D NL+ M + G + +IL+ K +D A+ V EM+ +G ++ T
Sbjct: 386 GRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTY 445
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ LI CRM + +A +F MI G+ P+ + L F G A++ + M S
Sbjct: 446 STLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMS 505
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 7/332 (2%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
ILI +A+ GM++ A+ F + N + + L+ + C+ GR+ A E F +
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT----YSTLISAFCRMGRLADAMEKFSQ 467
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT-PNVVTYGTLVEGYCR 156
+ P VY+ L++G+ ++ A+ F EM + + PN+V + +++ C
Sbjct: 468 MISI--GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
RV A + + G P + +N++IDG G+ E+ G+++ + P +VT
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
+LV GYCK+G ++ + + M+ + P+ TYN + G+ A ++ +MI
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMI 645
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+SG D TY ILLK LC+ D D AI + ++ C D+ +I+ L ++ + +
Sbjct: 646 DSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRRE 705
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EA+ F + GLVP+ T+ + K G
Sbjct: 706 EANDLFAAISTSGLVPNVSTYGVMIRNLLKEG 737
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 39/311 (12%)
Query: 98 RKELDQSWAP-TVRVYNILLNGWFR----------------------------------- 121
R+E AP TVR Y IL++ R
Sbjct: 112 REEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCH 171
Query: 122 SKNVKDAERFWLE-MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG--IEPN 178
+K +A L M + + P+ ++Y T+++ C R A+ +V+ M KEG P+
Sbjct: 172 AKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPD 231
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ +NTVI G + G + + + P + TY S+V CKA ++ A +L+
Sbjct: 232 VVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLR 291
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ +G P TYN +S G +++ ++RKM G PD +T+ + LCK
Sbjct: 292 QMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHG 351
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A ++ + M +G D+ + ++L+H +F + + F M +G+V +
Sbjct: 352 RSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCIN 411
Query: 359 RLNDEFKKRGM 369
L KRGM
Sbjct: 412 ILISAHAKRGM 422
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 23/388 (5%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+K L AK D A +LL ++ VPD +S +T + + +R+
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRS------------QE 213
Query: 61 NLDMVKNF-------DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYN 113
LDMV+ F ++ KQG V A F++ + + P V YN
Sbjct: 214 ALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEM--VQKGVVPDVGTYN 271
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+++ +++ + AE +M + V P+ VTY ++ GY + ++ ++M +
Sbjct: 272 SIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSK 331
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G+ P+ + +++ + L + GR ++ + + P +V+Y+ L+ GY G
Sbjct: 332 GLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADM 391
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ + M +G + + N +K G +++AM ++ +M G P+ +TY L+
Sbjct: 392 NNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISA 451
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV-P 352
C+ +L A++ +M G + + LIH C +A +M+ +GL P
Sbjct: 452 FCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRP 511
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + F + G AQ + N++
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLV 539
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 129 ERFWLEMRKENVTP-NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
R E V P V TYG L++ CR RR D V + + G++ I T +
Sbjct: 108 NRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLK 167
Query: 188 GLVEAGRFEE-VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
L A R +E V ++ R P ++Y +++K C + A +++ M G
Sbjct: 168 CLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR 227
Query: 247 PSP--TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
SP ++N F K G+V A NL+ +M++ G PD TY+ ++ LCK +D A
Sbjct: 228 CSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAE 287
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
V ++M +G + D T +IH + E++ F M +GL+P +TF
Sbjct: 288 FVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSL 347
Query: 365 KKRGMTALAQKLCNVMSS 382
K G + A+++ M++
Sbjct: 348 CKHGRSKDAEEIFQYMTT 365
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 99/238 (41%), Gaps = 14/238 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNL----DMVKNFDSGASLFEILLDSLCKQGRVKA 90
TF LI Y G +E A + ++ D+V N L+ CK G++
Sbjct: 550 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTN--------NTLVSGYCKSGKIDD 601
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
F R+ L + PT YNI+L+G R+ A++ + EM ++ TY L
Sbjct: 602 GLILF--REMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 659
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++G CR D AI L ++ + + + NT+I+ L + R EE + +
Sbjct: 660 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGL 719
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + TY +++ K G +E A + M G PS N R + G + A
Sbjct: 720 VPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGRVKAAS 92
+F+++ R Y +A + E A+ F MV F S+ F +L+ + +G
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFH-----RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL 168
Query: 93 EYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E++ ++ + +P +N+++ + V A + M ++ P+ TY TL
Sbjct: 169 EFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTL 228
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++G C+ R+D A+ L+ EM+ EG P+ ++YN +IDGL + G V+ +++ +
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGC 288
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P VTY +L+ G C G L+ A +L+ M+S +P+ TY K + D
Sbjct: 289 FPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGAR 348
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L M E GY ++ Y +L+ L KE K + A+ + K+M +GC ++ + +I LC
Sbjct: 349 LLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLC 408
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
R K +EA MI G +P+ T+ L F K G++ A
Sbjct: 409 REGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEA 451
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 154/331 (46%), Gaps = 2/331 (0%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +F ++ G+ + +++ N +M N F +++ +LCK G V A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRA 206
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E F E + P Y L++G + + + +A EM+ E +P+ V Y L+
Sbjct: 207 IEVFRGMPE--KKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C+ + R +LV M +G PN + YNT+I GL G+ ++ ++ER + +
Sbjct: 265 DGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VTY +L+ G K +++L M RG+ + Y+ K GK E+AM L
Sbjct: 325 PNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTL 384
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++KM E G P+ + Y ++ LC+E K + A ++ M GC ++ T + L+ +
Sbjct: 385 WKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFK 444
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+EA + +M G + + L D
Sbjct: 445 TGLSEEAIQVWREMDETGCSRNEFCYSVLID 475
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ +L+D LCK+G + ++ + P YN L++G + A
Sbjct: 259 IYNVLIDGLCKKGDLSRVTKLVDNM--FLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M PN VTYGTL+ G + RR RL+ M + G N +Y+ +I GL + G
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEG 376
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ EE + ++ P +V Y++++ G C+ G A +IL MIS G LP+ TY+
Sbjct: 377 KAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYS 436
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F K G E+A+ ++R+M E+G + + Y +L+ LC ++ A+ V +M
Sbjct: 437 SLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
G D + +I LC + D A + +M+
Sbjct: 497 GIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 5/285 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC +G++ A + + P Y L+NG + + D R +
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERM--VSSKCIPNDVTYGTLINGLVKQRRAMDGARLLIS 352
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N Y L+ G + + + A+ L K+M ++G PN +VY+ VIDGL G+
Sbjct: 353 MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGK 412
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ + P + TY+SL+KG+ K G E A ++ + M G + Y+
Sbjct: 413 PNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSV 472
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR- 313
G+V++AM ++ KM+ G PD + Y ++K LC +D A+++ EM C+
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 314 --GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
D+ T +L+ LC A M+ RG P +T
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 10/325 (3%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F ++ T+ LI G ++ A+ E + + N + L++ L KQ R
Sbjct: 289 FPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN----DVTYGTLINGLVKQRRAM 344
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+ +E + + +Y++L++G F+ ++A W +M ++ PN+V Y
Sbjct: 345 DGARLLISMEE--RGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSA 402
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+++G CR + + A ++ M G PN Y++++ G + G EE +
Sbjct: 403 VIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETG 462
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
Y+ L+ G C G ++ A + M++ G P Y+ + G ++ A+
Sbjct: 463 CSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAAL 522
Query: 270 NLYRKMI---ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
LY +M+ E PD +TY+ILL LC + + A+ + M RGCD D+ T +
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFL 582
Query: 327 HLLC-RMYKFDEASAEFEDMIRRGL 350
+ L + +E + E+++ R L
Sbjct: 583 NTLSEKSDSCEEGRSFLEELVARLL 607
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 23/239 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L++ + + G+ E AI + + +N + +L+D LC GRVK A
Sbjct: 434 TYSSLMKGFFKTGLSEEAIQVWREMDETGCSRN----EFCYSVLIDGLCGVGRVKEAMMV 489
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM---RKENVTPNVVTYGTLV 151
+ K L P Y+ ++ G ++ A + + EM + P+VVTY L+
Sbjct: 490 WSKM--LTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C + V RA+ L+ M G +P+ I NT ++ L E CE G
Sbjct: 548 DGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD------------SCEEG 595
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ + LV K + GA KI+++M+ + P +T+ K K+ A+N
Sbjct: 596 RSFL--EELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAIN 652
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 167/354 (47%), Gaps = 18/354 (5%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCKQGRVKAA 91
+ +L+R + G V+ W + DMV SG S F +L+ LC G + A
Sbjct: 24 YNVLLRSCTKEGRVDCVSWLCK-----DMVA---SGVSPETYTFNVLIGLLCDSGCLDDA 75
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E F K E + P + IL+ G+ R+ EMR+ +PN V Y TL+
Sbjct: 76 RELFDKMPE--KGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLI 133
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE-- 209
+C+ + D A +LV EMRK+G+ P+ + +N I L +G+ E S + + E
Sbjct: 134 SSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVL 193
Query: 210 --PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P P ++TY ++ G+CK G LE A + + M L + +YN + + GK+ +
Sbjct: 194 GLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLE 253
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A + ++M++ G P+ +Y+I++ LCK L A + + M G D T T L+H
Sbjct: 254 AQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLH 313
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
C K EA+ +M+R G P+ T L K G + A++L M+
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 167/401 (41%), Gaps = 68/401 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+F IL+R Y RAG + L F ++ L+ S CK+G+ A +
Sbjct: 93 SFGILVRGYCRAGFTSKGLELLGEMRRL----GFSPNKVVYNTLISSFCKEGKTDDAEKL 148
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV----TPNVVTYGTL 150
+ ++ +P V +N ++ S V +A R + +M+ + V PN++TY +
Sbjct: 149 VDEMRK--DGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLM 206
Query: 151 VEGYC-----------------------------------RLRRVDRAIRLVKEMRKEGI 175
+ G+C R+ ++ A ++KEM G+
Sbjct: 207 LGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGM 266
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
EPN YN V+DGL + G + +M P VTYT+L+ GYC G + A+
Sbjct: 267 EPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANN 326
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L+ M+ G P+ T N K G++ +A L +KM E GY D +T +I++ LC
Sbjct: 327 VLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLC 386
Query: 296 KEDKLDLAIQVSKEMKCRG-----------------------CDIDLDTSTMLIHLLCRM 332
KLD AI++ M G C DL + + +I LC+
Sbjct: 387 NNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKA 446
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ EA +F +M+ + L P + F K G + A
Sbjct: 447 GRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 156/350 (44%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +LI +G ++ A F+ K + F IL+ C+ G E
Sbjct: 58 TFNVLIGLLCDSGCLDDARELFDKMPE----KGCEPNEYSFGILVRGYCRAGFTSKGLEL 113
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + L ++P VYN L++ + + DAE+ EMRK+ ++P+VVT+ +
Sbjct: 114 LGEMRRL--GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISAL 171
Query: 155 CRLRRVDRAIRLVKEMRKEGI----EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
C +V A R+ ++M+ + + +PN I YN ++ G + G EE + E+ V E
Sbjct: 172 CSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+Y + G + G L A +LK M+ G P+ +YN K G + DA
Sbjct: 232 LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARM 291
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L R M SG PD +TY LL C K+ A V +EM GC + T +L++ L
Sbjct: 292 LMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLW 351
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + EA + M +G V +T + D G A ++ N M
Sbjct: 352 KEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGM 401
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 162/359 (45%), Gaps = 36/359 (10%)
Query: 19 LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
+D++ G P+ + T+ +++ + + GM+E A FE + + N +S + I
Sbjct: 189 IDEVLGLPQPNII---TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRES----YNIW 241
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
L L + G++ A ++ +D P V YNI+++G ++ + DA M
Sbjct: 242 LLGLVRIGKLLEAQLVL--KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS 299
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
V P+ VTY TL+ GYC +V A +++EM ++G PN N ++ L + GR E
Sbjct: 300 GVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEA 359
Query: 199 SGMMERFLVCEPGPTMVTYTS--LVKGYCKAGDLEGASKILKMMISRG------------ 244
++++ + E G + T T ++ G C G L+ A +I+ M + G
Sbjct: 360 EELLQK--MNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417
Query: 245 -----------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+P +Y+ K G+V +A + +M+ PD Y + +
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
CKE K+ A +V K+M+ +GC+ L T LI L + E ++M RG+ P
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSP 536
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 142/332 (42%), Gaps = 36/332 (10%)
Query: 77 ILLDSLCKQGRVKAASE-----YFHKRKELD----------------QSWAPTVRVYNIL 115
I++D LC G++ A E + H L + P + Y+ +
Sbjct: 380 IVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTI 439
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++G ++ V +A++ ++EM +N+ P+ Y + +C+ ++ A R++K+M K+G
Sbjct: 440 ISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGC 499
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
YN++I GL + E+ G+++ P + Y +++ C+ G ++ A
Sbjct: 500 NKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSK---FGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
+L M+ +G P+ ++++ + F K F V++ + + LT++ LL
Sbjct: 560 VLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELL- 618
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM----LIHLLCRMYKFDEASAEFEDMIRR 348
+ + +KE+ D D LI LC+ K D+AS +I +
Sbjct: 619 -------VGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDK 671
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
G +F + D KRG A +L M
Sbjct: 672 GYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 6/221 (2%)
Query: 162 RAIRLVKEMRKEGIE--PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+AI K +R E P+ +YN ++ + GR + VS + + + P T+
Sbjct: 2 KAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNV 61
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ C +G L+ A ++ M +G P+ ++ R + + G + L +M G
Sbjct: 62 LIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLG 121
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
++P+++ Y+ L+ CKE K D A ++ EM+ G D+ T I LC K EAS
Sbjct: 122 FSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEAS 181
Query: 340 AEFEDMIRRGLV----PHYLTFKRLNDEFKKRGMTALAQKL 376
F DM ++ P+ +T+ + F K GM A+ L
Sbjct: 182 RIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARAL 222
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 113/284 (39%), Gaps = 41/284 (14%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD +S T + + + R G EA E M KN ++++++ + S CK+G
Sbjct: 430 MPDLISYSTIISGLCKAGRVG--EAKKKFIEM-----MGKNLQPDSAIYDVFIHSFCKEG 482
Query: 87 RVKAA-----------------------------SEYFHKRKELDQ----SWAPTVRVYN 113
++ +A ++ F +D+ +P V +YN
Sbjct: 483 KISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYN 542
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+L+ VKDA EM ++ ++PN+ ++ L++ +C+ A+ + E+
Sbjct: 543 NVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDF-SAVDEIFEIALN 601
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
+Y+ + L+ G + + E L Y L+ CK L+ A
Sbjct: 602 VCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDA 661
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
S IL +I +G+ P ++ K G +A L KM+E
Sbjct: 662 SGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 28/334 (8%)
Query: 75 FEILLDSLCKQGRVKAASEYFH----------------------------KRKELDQSWA 106
+ ILL+ LC + R + A E H K LDQ +
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKMLDQRIS 113
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V YN ++ +++ V A M K V P+ +TY ++V G+C + AI
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 173
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+K+MR +G+EP+ + YN+++D L + GR E + + P + TY +L++GY
Sbjct: 174 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L +L +M+ G P+ ++ ++K KVE+AM ++ KM + G P+ +T
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ +LCK +++ A+ ++M G D LIH LC K+++A F +M+
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG+ + F + D K G + KL ++M
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 3/291 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ +LCK V A E + P YN +++G+ S K+A F +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTM--VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKK 176
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + V P+VVTY +L++ C+ R A ++ M K G++P+ Y T++ G G
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ G+++ + P ++ LV Y K +E A + M +G P+ TY
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+VEDAM + +MI+ G PD + Y+ L+ LC DK + A ++ EM RG
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ +I C+ + E+ F+ M+R G+ P +T R NDE K
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGR-NDEAK 406
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 30/295 (10%)
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA-------------------------ER 130
H EL + P V YNILLNG ++A
Sbjct: 38 HVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 131 FWLE-----MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
F+ E M + ++PNVVTY +++ C+ + VD+A+ ++ M K G+ P+ + YN++
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ G +G+ +E +++ P +VTY SL+ CK G A KI M RG
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TTY + ++ G + + L M+ +G P+ + IL+ K++K++ A+
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
V +M+ +G + + T +I +LC+ + ++A FE MI GL P + + L
Sbjct: 278 VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE--PNAIVYN 183
+DA + E+ + + P+V +Y L+ G C R A+ L+ M +G + P+ + Y+
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
TVI+G F+E G +++ L P +VTY S++ CKA ++ A ++L M+
Sbjct: 93 TVINGF-----FKE--GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TYN F G+ ++A+ +KM G PD +TY+ L+ LCK + A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ M RG D+ T L+ E + M+R G+ P++ F L
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265
Query: 364 FKKR 367
+ K+
Sbjct: 266 YAKQ 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 34/343 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L + +PD + T+ ++ + +G + AI +
Sbjct: 122 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCM---TYNSIVHGFCSSGQPKEAIVFLKKMR 178
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D LCK GR A + F + + P + Y LL G+
Sbjct: 179 S----DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK--RGLKPDITTYGTLLQGYA 232
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + M + + PN + LV Y + +V+ A+ + +MR++G+ PNA+
Sbjct: 233 TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 292
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVID L ++GR E+ E+ + P + Y SL+ C E A ++ M
Sbjct: 293 TYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEM 352
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT-------------- 286
+ RG S +N K G+V ++ L+ M+ G PD +T
Sbjct: 353 LDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAF 412
Query: 287 -----------YHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
Y ++ + + + L+ Q+ M+ GC +D
Sbjct: 413 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 455
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTYT 218
A + E+ + GI P+ YN +++GL + R +E ++ ++ + G P +V+Y+
Sbjct: 36 ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLH--IMADDGGDCPPDVVSYS 92
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G+ K GDL+ K+L IS P+ TYN K V+ AM + M++S
Sbjct: 93 TVINGFFKEGDLD---KMLDQRIS----PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY+ ++ C + AI K+M+ G + D+ T L+ LC+ + EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM 247
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 16/260 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F IL+ YA+ VE A+ F + + A + ++D LCK GRV+ A Y
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQ----QGLNPNAVTYGTVIDVLCKSGRVEDAMLY 313
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +D+ P VYN L++ + AE +LEM + + + + ++++ +
Sbjct: 314 FEQM--IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 371
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ RV + +L M + G++P+ I GR +E + F P
Sbjct: 372 CKEGRVIESGKLFDLMVRIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNY 421
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY + + G LE ++ M G N+ R + G++ A
Sbjct: 422 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 481
Query: 275 MIESGYTPDRLTYHILLKIL 294
+ E ++ + T + + +L
Sbjct: 482 IDEKHFSLEASTASLFIDLL 501
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 167/349 (47%), Gaps = 15/349 (4%)
Query: 11 FDSAWCLLLDKIGGHEVP---DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
F+ A+ L + + +P DF T +RRY E I+ F+ +++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRY------ETVIY---FSQKMELY-G 101
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F IL+ C+ R+ A K +L + P++ + LL+G+ + D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL--GYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + M K PNVV Y TL++G C+ ++ A+ L+ EM K+G+ + + YNT++
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL +GR+ + + M+ + P +VT+T+L+ + K G+L+ A ++ K MI P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN G++ DA + M G P+ +TY+ L+ CK +D +++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ M C G + D+ T LIH C++ K A F M+ R + P +T
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 10/318 (3%)
Query: 31 VSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGR 87
+S D +F ILI + R + A+ M+K ++ F LL C R
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLG-----KMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + + P V VYN L++G ++ + A EM K+ + +VVTY
Sbjct: 157 IGDAFSLVILM--VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C R A R++++M K I P+ + + +ID V+ G +E + + +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY S++ G C G L A K +M S+G P+ TYN F KF V++
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
M L+++M G+ D TY+ L+ C+ KL +A+ + M R D+ T +L+H
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 328 LLCRMYKFDEASAEFEDM 345
LC + + A +F+DM
Sbjct: 395 GLCVNGEIESALVKFDDM 412
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 7/297 (2%)
Query: 64 MVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MVK+ ++ ++ L+D LCK G + A E ++ ++ + V YN LL G S
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK--KGLGADVVTYNTLLTGLCYS 224
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
DA R +M K ++ P+VVT+ L++ + + +D A L KEM + ++PN + Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N++I+GL GR + + L+ G P +VTY +L+ G+CK ++ K+ + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFD--LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
GF TYN + + GK+ A++++ M+ TPD +T+ ILL LC ++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ A+ +M+ I + ++IH LC+ K ++A F + G+ P T+
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
YF ++ EL + + + IL++ + R + A +M K P++VT+G+L+ G
Sbjct: 92 YFSQKMEL-YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C + R+ A LV M K G EPN +VYNT+IDGL + G ++ G
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY +L+ G C +G A+++L+ M+ R P T+ F K G +++A LY+
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+MI+S P+ +TY+ ++ LC +L A + M +GC ++ T LI C+
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
DE F+ M G T+ L + + G +A
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ + LL + + F +M ++ ++ ++ L+ +CR R+ A+ +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + + +++ G R + ++ + P +V Y +L+ G CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+L A ++L M +G TYN G+ DA + R M++ PD +T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L+ + K+ LD A ++ KEM D + T +I+ LC + +A F+ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+G P+ +T+ L F K M KL MS
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L G+ S +DA + EM P++V + L+ LRR + I ++M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I + + ++T L+ +C+ L A
Sbjct: 102 ISHD-----------------------------------LYSFTILIHCFCRCSRLSFAL 126
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+L M+ G+ PS T+ F ++ DA +L M++SGY P+ + Y+ L+ L
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CK +L++A+++ EM+ +G D+ T L+ LC ++ +A+ DM++R + P
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
+TF L D F K+G AQ+L
Sbjct: 247 VTFTALIDVFVKQGNLDEAQEL 268
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
PD V TF LI + + G ++ A ++ +M+++ D + +++ LC G
Sbjct: 244 PDVV---TFTALIDVFVKQGNLDEAQELYK-----EMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R+ A + F + P V YN L++G+ + + V + + + M E ++ T
Sbjct: 296 RLYDAKKTFDLMAS--KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV------------------------- 181
Y TL+ GYC++ ++ A+ + M + P+ I
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 182 ----------YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
YN +I GL +A + E+ + R V P TYT ++ G CK G
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 232 GASKILKMMISRGFL 246
A ++++ M G +
Sbjct: 474 EADELIRRMKEEGII 488
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 2/292 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K ++ + +L+D LCK R +A Y +K + AP YN L+NG + + +
Sbjct: 39 KGIEADVCTYNMLIDDLCKNNR--SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKI 96
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A R + EM N++PN VTY L++G+C ++A+RL+ M +G+ P+ + Y +
Sbjct: 97 GGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGAL 156
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ GL + +F+ +MER + YT+++ G CK G L+ + ++L MM G
Sbjct: 157 LSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGA 216
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P T++ F K GK+++A + KM ++G P+ + Y L+ CK+ + A +
Sbjct: 217 SPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFR 276
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
M G D+D +LI LCR + EA M L P+ +TF
Sbjct: 277 NYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITF 328
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ PT+ YN +LN + K A M + + +V TY L++ C+ R +
Sbjct: 4 SGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAK 63
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
L+K+MRK I PN YNT+I+GL++ + + + L+ P VTY L+
Sbjct: 64 GYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILID 123
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G+C G+ E A ++L +M ++G P Y SK K + A +L ++ SG
Sbjct: 124 GHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVV 183
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
Y ++ LCK LD ++Q+ M G D+ T ++LI+ C+ K A
Sbjct: 184 GYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVI 243
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRG 368
M + GL P+Y+ + L K+G
Sbjct: 244 CKMFKAGLAPNYVIYATLIYNSCKKG 269
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 154/353 (43%), Gaps = 41/353 (11%)
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS 104
+ G AA + +E + K + +LD + G+++ + F K + S
Sbjct: 478 KVGQSNAASYIYEEMEH----KGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQS--GS 531
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P++ YNILL+G+ + K++ +F+ M + ++P+ +T +++ G C+ +D
Sbjct: 532 LTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGF 591
Query: 165 RLVKEMRKE-----------------------------------GIEPNAIVYNTVIDGL 189
+++K+M E GI P+ YN + GL
Sbjct: 592 KMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGL 651
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
A E ++ L PT Y SL+ G C+ GD++GA ++ M + G
Sbjct: 652 NRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWD 711
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
+ R ++ GKVE+AM + M++ P T+ L+ +LCK+ KL A+++ +
Sbjct: 712 VAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGK 771
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
M G +D+ +LI LC A +E+M RGL P+ T+ L D
Sbjct: 772 MALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLID 824
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 129/305 (42%), Gaps = 3/305 (0%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
G + ++D LCK G + + + +P + +++L+NG+ ++ +K+A+
Sbjct: 184 GYRAYTAMIDGLCKHGLLDESLQLLDMM--FKDGASPDIITFSVLINGFCKAGKIKNAKE 241
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+M K + PN V Y TL+ C+ + A R M + G + + + N +I L
Sbjct: 242 VICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLC 301
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AGR E M + P +T+ ++ GY GD A + MI G PS
Sbjct: 302 RAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHF 361
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY + K G + +A L K+ D Y+ +L CK KL A+ + EM
Sbjct: 362 TYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEM 421
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRLNDEFKKRGM 369
D T +++ L R K A FE + RG L P+ + + L D K G
Sbjct: 422 VQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQ 481
Query: 370 TALAQ 374
+ A
Sbjct: 482 SNAAS 486
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 163/351 (46%), Gaps = 10/351 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD T+ I++ +R G + A+ FE A ++ L D L K G
Sbjct: 427 LPD---SHTYAIILAGLSRKGKMVPALLFFEKA---LARGTLSPNKVMYTSLFDGLFKVG 480
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ AAS Y ++ E + P N +L+G+ R ++ E+ +++M+ ++TP++ T
Sbjct: 481 QSNAAS-YIYEEME-HKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLAT 538
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ GY + + + + + M + GI P+ + +++I GL ++G + M+++ +
Sbjct: 539 YNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMI 598
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ + +T L+ C+ + A +L + G +P TYN F ++ +
Sbjct: 599 MEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALR 658
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-DLDTSTML 325
++ L M+E G TP Y L+ +C+ + A ++ EM+ G D+ S M
Sbjct: 659 ESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAM- 717
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ L + K +EA + M+++ L+P TF L K+ + A KL
Sbjct: 718 VRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKL 768
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 20/387 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K D + LL PD + TF +LI + +AG ++ A
Sbjct: 191 MIDGLCKHGLLDESLQLLDMMFKDGASPDII---TFSVLINGFCKAGKIKNAKEV----- 242
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNIL 115
+ K F +G + ++ L+ + CK+G + +E F + ++ + N+L
Sbjct: 243 ---ICKMFKAGLAPNYVIYATLIYNSCKKGDI---TEAFRNYATMTRTGHDVDYFICNVL 296
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
++ R+ V +AE F M ++ PN +T+ ++ GY L +A + EM K G
Sbjct: 297 ISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGH 356
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ Y +++ GL + G E ++ + Y +++ CK G L A
Sbjct: 357 CPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVA 416
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-YTPDRLTYHILLKIL 294
+ M+ LP TY S+ GK+ A+ + K + G +P+++ Y L L
Sbjct: 417 LFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGL 476
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
K + + A + +EM+ +G + D ++ RM K ++ F M L P
Sbjct: 477 FKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSL 536
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMS 381
T+ L + K+ K N+M+
Sbjct: 537 ATYNILLHGYSKKKDLLKCSKFYNIMT 563
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P +VTY T++ C+ R A L+ M +GIE + YN +ID L + R
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++++ P TY +L+ G K + GA+++ M+ P+ TYN
Sbjct: 61 SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G E A+ L M G PD + Y LL L K K D+A + + ++ G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ T +I LC+ DE+ + M + G P +TF L + F K G
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAG 234
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M G P + YNT+++ + GR++ S +++R + TY L+ CK
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+LK M R P+ TYN K K+ A ++ +M+ +P+R+TY+I
Sbjct: 61 SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ C + A+++ M+ +G D L+ L ++ KFD A + E + G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+V Y + + D K G+ + +L ++M
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMM 211
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + PTV + L++ + + +A + +M V +VV Y L+ G C
Sbjct: 738 LQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDA 797
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDG------------LVEAGRFEEVSGMMERFLV- 207
A L +EM++ G+ PN Y T+ID LV +FE++ G+++ +V
Sbjct: 798 LAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVYLEQFEKLVGILKHRMVG 857
Query: 208 ------CEPGP 212
EP P
Sbjct: 858 TKLKLRVEPCP 868
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 176/379 (46%), Gaps = 14/379 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV--PDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
++ +A+A +FD LL + + G EV FV + +L+++ V AI+ F+
Sbjct: 114 LVTWMAQASDFDMVKKLLAE-VQGKEVRINSFVYNNLLSVLVKQ----NQVHEAIYLFKE 168
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+V F IL+ LC+ G V A E F + P V YN L+NG
Sbjct: 169 Y----LVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESF--GCLPDVVTYNTLING 222
Query: 119 WFRSKNVKDAERFWLEMR-KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
++ V+ + E++ + + +P++VTY +++ G+C+ ++ A L +EM + GI+P
Sbjct: 223 LCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQP 282
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
N I +N +IDG + G E M + + +VT+TSL+ GYC+AG + K
Sbjct: 283 NVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFW 342
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+M +R P+ TY K ++ +A + ++ S P Y+ ++ CK
Sbjct: 343 NVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKA 402
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+D + KEM+ + CD D T T+LI C + EA F M+ P +T
Sbjct: 403 GNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITV 462
Query: 358 KRLNDEFKKRGMTALAQKL 376
L K GM A ++
Sbjct: 463 NSLISCLLKAGMPNEAYRI 481
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 37/340 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE--- 57
++ VL K + A L + + PD TF ILIR R G V+ A F+
Sbjct: 149 LLSVLVKQNQVHEAIYLFKEYLVMQSPPD---TWTFNILIRGLCRVGGVDRAFEVFKDME 205
Query: 58 -------------FANNLDMVKNFDSGASLF-EI---------------LLDSLCKQGRV 88
N L G LF EI ++ CK G++
Sbjct: 206 SFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKM 265
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
K AS F + + P V +N+L++G+ + N+ +AE + +M + + +VVT+
Sbjct: 266 KEASNLFEEM--MRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFT 323
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
+L++GYCR +V+ ++ M+ + P Y +I+ L + R E + +
Sbjct: 324 SLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNS 383
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P Y ++ G+CKAG+++ + ILK M + P T+ G++ +A
Sbjct: 384 SIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEA 443
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
+N++ +M+ + PD +T + L+ L K + A ++ K
Sbjct: 444 INIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRK 483
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 12/279 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE--VPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L KA E C L +I PD V T+ +I + ++G ++ A FE
Sbjct: 219 LINGLCKANEVQRG-CELFKEIQSRSDCSPDIV---TYTSIISGFCKSGKMKEASNLFEE 274
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
M F +L+D K G + A + K D S V + L++G
Sbjct: 275 M----MRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCS--ADVVTFTSLIDG 328
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ R+ V +FW M+ NV+P V TY L+ C+ R++ A + +++ I P
Sbjct: 329 YCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPK 388
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+YN VIDG +AG +E + +++ P VT+T L+ G+C G + A I
Sbjct: 389 PFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFN 448
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
M++ P T N K G +A + + +E
Sbjct: 449 RMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALE 487
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 144/329 (43%), Gaps = 12/329 (3%)
Query: 79 LDSLCKQGRVKAAS---EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
L SL RV+A++ FH + + + P ++ ++ + N +LE
Sbjct: 3 LFSLTGPFRVRASTIAIARFHGQTQGGSRFYPDRQLTPLIAFEVIKRFNNPKVGFKFLEF 62
Query: 136 RKENVTPN--VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+ N+ N TY L+ C++ D + M +G P++ + ++ + +A
Sbjct: 63 SRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQAS 122
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F+ V ++ E Y +L+ K + A + K + P T+N
Sbjct: 123 DFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFN 182
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
R + G V+ A +++ M G PD +TY+ L+ LCK +++ ++ KE++ R
Sbjct: 183 ILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSR 242
Query: 314 G-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
C D+ T T +I C+ K EAS FE+M+R G+ P+ +TF L D F K G A
Sbjct: 243 SDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAE 302
Query: 373 AQKLCNVM------SSVPRSMELLDSRCK 395
A+ + M + V L+D C+
Sbjct: 303 AEAMYRKMAYFDCSADVVTFTSLIDGYCR 331
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+ G LV + D +L+ E++ + + N+ VYN ++ LV+ +
Sbjct: 99 MGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQ 158
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + +LV + P T+ L++G C+ G ++ A ++ K M S G LP TYN
Sbjct: 159 VHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNT 218
Query: 255 FFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K +V+ L++++ S +PD +TY ++ CK K+ A + +EM
Sbjct: 219 LINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRS 278
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T +LI ++ EA A + M +TF L D + + G
Sbjct: 279 GIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHG 338
Query: 374 QKLCNVMSS 382
K NVM +
Sbjct: 339 LKFWNVMKT 347
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 172/360 (47%), Gaps = 12/360 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF LIR G + A+ F+ M+ + F + L++ L
Sbjct: 130 GHQ-PD---PTTFTTLIRGLCVEGKIGEALHLFD-----KMIDEGFQPNVVTYGTLINGL 180
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK G AA ++ + P V +Y +++ + + V +A + +M + ++P
Sbjct: 181 CKVGNTSAAIRLLRSMEQGNCQ--PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 238
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ TY +LV C L L+ +M I P+ ++++TV+D L + G+ E ++
Sbjct: 239 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 298
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + P +VTYT+L+ G+C +++ A K+ MM+ +GF P +Y + K
Sbjct: 299 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
K++ AM L+ +M + PD TY+ L+ LC +L AI + EM RG DL T
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++L+ LC+ +EA A + + L P + + D + G A+ L + +SS
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 162/342 (47%), Gaps = 6/342 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G AAI +++ N ++ ++DSLCK +V A
Sbjct: 172 TYGTLINGLCKVGNTSAAI---RLLRSMEQ-GNCQPDVVIYTSIIDSLCKDRQVTEAFNL 227
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + Q +P + Y L++ K +M + P+VV + T+V+
Sbjct: 228 FSQM--VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +V A +V M + G+EP+ + Y T++DG +E + + + P +
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
++YT+L+ GYCK ++ A + + M + ++P TYN G+++DA+ L+ +
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ G PD +TY ILL LCK L+ A+ + K ++ + D+ ++I +CR +
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ A F ++ +GL P T+ + KRG+ A KL
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V +++ +++ + V +A M + V P+VVTY TL++G+C +D A+++
Sbjct: 273 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 332
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M ++G P+ I Y T+I+G + + ++ + E E P TY +L+ G C
Sbjct: 333 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCH 392
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A + M++RG +P TY+ K +E+AM L + + S PD
Sbjct: 393 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQV 452
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+I++ +C+ +L+ A + + +G + T ++IH LC+ +EA+ F +M
Sbjct: 453 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 512
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P T+ + F + T A +L M
Sbjct: 513 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F ++D+LCK+G+V A E + + P V Y L++G + +A + +
Sbjct: 277 IFSTVVDALCKEGKVTEAHEIVDMM--IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 334
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEA 192
M ++ P+V++Y TL+ GYC++ ++D+A+ L +EM RKE I P+ YNT++ GL
Sbjct: 335 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDTKTYNTLMYGLCHV 393
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSL-------------------------------- 220
GR ++ + + P +VTY+ L
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453
Query: 221 ---VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+ G C+AG+LE A + + S+G PS TYN K G + +A L+ +M
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 513
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ +PD TY+ + + + ++ AIQ+ +EM RG D
Sbjct: 514 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 13/289 (4%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V NIL+N + V A ++ K P+ T+ TL+ G C ++ A+ L
Sbjct: 98 PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 157
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M EG +PN + Y T+I+GL + G ++ P +V YTS++ CK
Sbjct: 158 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 217
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A + M+ +G P TY + + L +M+ S PD +
Sbjct: 218 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 277
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ ++ LCKE K+ A ++ M RG + D+ T T L+ C + DEA F+ M+
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 337
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCK 395
R+G P +++ T L C + + ++M L + C+
Sbjct: 338 RKGFAPDVISY------------TTLINGYCKI-HKIDKAMYLFEEMCR 373
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 10/261 (3%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P++V + L+ +++ + L +M G+ PN N +I+ R +
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + L P T+T+L++G C G + A + MI GF P+ TY K
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G A+ L R M + PD + Y ++ LCK+ ++ A + +M +G D+ T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T L+H LC + ++ + M+ ++P + F + D K G A ++ ++M
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM- 301
Query: 382 SVPRSME--------LLDSRC 394
+ R +E L+D C
Sbjct: 302 -IQRGVEPDVVTYTTLMDGHC 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L A L + + ++PD V T+ IL+ + +E A+ +
Sbjct: 390 LCHVGRLQDAIALFHEMVARGQMPDLV---TYSILLDSLCKNRHLEEAMALLKAIE---- 442
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
N + ++ I++D +C+ G ++AA + F + P+V YNI+++G +
Sbjct: 443 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS--SKGLHPSVWTYNIMIHGLCKRGL 500
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +A + ++EM + +P+ TY T+ G+ + RAI+L++EM G ++
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 47/211 (22%)
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R L P P++V + L+ K + M S G P+ T N F
Sbjct: 55 RLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLN 114
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL----------------------- 300
+V A ++ K+++ G+ PD T+ L++ LC E K+
Sbjct: 115 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYG 174
Query: 301 ------------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
AI++ + M+ C D+ T +I LC+ + EA F M+ +
Sbjct: 175 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 234
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
G+ P T+ T+L LCN+
Sbjct: 235 GISPDIFTY------------TSLVHALCNL 253
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 182/379 (48%), Gaps = 25/379 (6%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
++ L K+ D A LL ++ IG PD + T+ +LI + G VE AI +E
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLK--PDLL---TYSVLIHGLCKRGAVEEAIELYEE 470
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + N + + ++ L ++G + A YF + D A + +YNI+++G
Sbjct: 471 MCSKRIYPN----SFVCSAIISGLFEKGAISEAQMYFDSVTKSDV--AEEIILYNIMIDG 524
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + N+ +A R + ++ ++ ++P +VT+ +L+ G+C+ ++ A++L+ ++ G+ P
Sbjct: 525 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 584
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++ Y T+++G E G + M+ PT +TYT +VKG CK G L + ++LK
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M +RG P TYN + F K ++ A L+ +M++ P +TY++L+ LC
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 704
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A ++ ++ + + T +I C A F M+ RG
Sbjct: 705 NLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF-------- 756
Query: 359 RLNDEFKKRGMTALAQKLC 377
E R +A+ +LC
Sbjct: 757 ----EVSIRDYSAVINRLC 771
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 174/361 (48%), Gaps = 43/361 (11%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
IL+D LC+Q R++ A + R+ + + P+V +N L++G+ + +V A+ F+ M
Sbjct: 240 ILIDGLCRQSRLQDAVTFL--RETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMI 297
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
K + P+V +Y L+ G C ++ A+ +M G+EP+ + YN + +G G
Sbjct: 298 KYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLIS 357
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+++R L+ P +VTYT L+ G+C+ G++E + K+ + M+S+G S TY
Sbjct: 358 GAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLL 417
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM------ 310
K G++++A+ L +M G PD LTY +L+ LCK ++ AI++ +EM
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY 477
Query: 311 ----KCRG-------------CDIDLDTST------------MLIHLLCRMYKFDEASAE 341
C + D+ T ++I ++ EA
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 537
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN---VMSSVPRSM---ELLDSRCK 395
++ +I +G+ P +TF L F K+G A A KL + V VP S+ L++ C+
Sbjct: 538 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCE 597
Query: 396 D 396
+
Sbjct: 598 E 598
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 161/368 (43%), Gaps = 44/368 (11%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ IL + G++ A + ++ + + IL+ C+ G
Sbjct: 338 PDIV---TYNILANGFRILGLISGAWKVVQRM----LLNGLNPDLVTYTILICGHCQMGN 390
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ + + K K L Q ++ Y +LL+ +S + +A EM + P+++TY
Sbjct: 391 IEESFKL--KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV--------- 198
L+ G C+ V+ AI L +EM + I PN+ V + +I GL E G E
Sbjct: 449 SVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 508
Query: 199 SGMMERFL------------------------VCEPG--PTMVTYTSLVKGYCKAGDLEG 232
S + E + + E G PT+VT+ SL+ G+CK G L
Sbjct: 509 SDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 568
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A K+L + G +P+ TY + + G + ++ +M P ++TY +++K
Sbjct: 569 AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 628
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LCKE +L ++Q+ K M RG D T +I C+ + +A M++ L P
Sbjct: 629 GLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 688
Query: 353 HYLTFKRL 360
+T+ L
Sbjct: 689 SPVTYNVL 696
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 165/351 (47%), Gaps = 10/351 (2%)
Query: 19 LDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
L + GG E P VS F L+ + + G V+ A F ++ + S + I
Sbjct: 258 LRETGGEEFGPSVVS---FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYS----YNI 310
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL LC G ++ A E+ + + + P + YNIL NG+ + A + M
Sbjct: 311 LLHGLCVAGSMEEALEFTNDME--NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL 368
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ P++VTY L+ G+C++ ++ + +L ++M +G++ + + Y ++ L ++GR +E
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++ V P ++TY+ L+ G CK G +E A ++ + M S+ P+ +
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 488
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ G + +A + + +S + + Y+I++ K + A++ K++ +G
Sbjct: 489 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 548
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ T LI+ C+ K EA + + GLVP +T+ L + + + G
Sbjct: 549 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 599
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFW---LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
++ YN LL N++ + W E++ V N T L++G CR R+ A+
Sbjct: 202 SIATYNSLL------YNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAV 255
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
++E E P+ + +N ++ G + G + + P + +Y L+ G
Sbjct: 256 TFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGL 315
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
C AG +E A + M + G P TYN F G + A + ++M+ +G PD
Sbjct: 316 CVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDL 375
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY IL+ C+ ++ + ++ ++M +G + + T T+L+ LC+ + DEA +
Sbjct: 376 VTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHE 435
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
M GL P LT+ L KRG A +L M S
Sbjct: 436 MEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCS 473
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 3/264 (1%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
W V+++L + R++ V DA +M+ N+ ++ TY +L+ LR D
Sbjct: 164 WDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIMW 220
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ E++ G+ N +IDGL R ++ + E GP++V++ +L+ G+
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G ++ A MMI G LP +YN G +E+A+ M G PD
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY+IL + A +V + M G + DL T T+LI C+M +E+ E
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRG 368
M+ +GL +T+ L K G
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSG 424
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 114/250 (45%), Gaps = 6/250 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + + G + A+ + V + + L++ C++G + + +
Sbjct: 552 TFNSLIYGFCKKGKLAEAVKLLDTIK----VHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 607
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H+ + ++ PT Y +++ G + + ++ + M + P+ +TY T+++ +
Sbjct: 608 LHEMEA--KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 665
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + +A +L +M + ++P+ + YN +I+GL G ++ ++ T
Sbjct: 666 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 725
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V YT+++K +C GD++ A M+ RGF S Y+ K + DA +
Sbjct: 726 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 785
Query: 275 MIESGYTPDR 284
M+ G PD+
Sbjct: 786 MLTHGIPPDQ 795
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 16/269 (5%)
Query: 18 LLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LLD I H VP V T+ L+ Y G + + F+ + ++ K +
Sbjct: 572 LLDTIKVHGLVPTSV---TYTTLMNGYCEEGDMHS---MFDMLHEME-AKAIKPTQITYT 624
Query: 77 ILLDSLCKQGRVKAASE---YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ LCK+GR+ + + Y + R P YN ++ + ++ +++ A +
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYAR-----GLFPDQITYNTVIQSFCKAHDLQKAFQLHN 679
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + ++ P+ VTY L+ G C + A RL+ ++ + I + Y T+I G
Sbjct: 680 QMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKG 739
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ + + ++ Y++++ CK + A MM++ G P
Sbjct: 740 DVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICL 799
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
F + G ++ MI+ G P
Sbjct: 800 VMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 139/273 (50%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YNI++N R A +M K P+VVT +L+ G+C+ RV AI LV +M
Sbjct: 48 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 107
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G P+ ++YNT+IDG + G + + +R VTY SLV G C +G
Sbjct: 108 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 167
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A+++++ M+ R +P+ T+ F K GK +AM LY +M PD TY+ L+
Sbjct: 168 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC ++D A Q+ M +GC D+ T LI+ C+ + DE + F +M +RGLV
Sbjct: 228 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
+T+ + + + G AQ++ + M S P
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 320
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 140/268 (52%), Gaps = 5/268 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ C+ RV A + K +E+ + P V +YN +++G + V DA + M +
Sbjct: 86 LINGFCQGNRVFDAIDLVSKMEEM--GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 143
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ V + VTY +LV G C R A RL+++M I PN I + VID V+ G+F E
Sbjct: 144 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 203
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E P + TY SL+ G C G ++ A ++L +M+++G LP TYN
Sbjct: 204 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 263
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K +V++ L+R+M + G D +TY+ +++ + + D A ++ M R
Sbjct: 264 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--- 320
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDM 345
++ T ++L++ LC ++ ++A FE+M
Sbjct: 321 NIRTYSILLYGLCMNWRVEKALVLFENM 348
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 155/300 (51%), Gaps = 5/300 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F ++ ++D CK G V A E F R E D A V YN L+ G S D
Sbjct: 111 FRPDVVIYNTIIDGSCKIGLVNDAVELFD-RMERDGVRADAV-TYNSLVAGLCCSGRWSD 168
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A R +M ++ PNV+T+ +++ + + + A++L +EM + ++P+ YN++I+
Sbjct: 169 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 228
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL GR +E M++ + P +VTY +L+ G+CK+ ++ +K+ + M RG +
Sbjct: 229 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 288
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TYN + + + G+ + A ++ +M P+ TY ILL LC +++ A+ +
Sbjct: 289 DTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLF 345
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ M+ ++D+ T ++IH +C++ ++A F + +GL P +++ + F ++
Sbjct: 346 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 405
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 5/286 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+++ LC+ R A K + + P V + L+NG+ + V DA +
Sbjct: 48 YNIVINCLCRCSRFVIALSVVGKMMKF--GYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 105
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VV Y T+++G C++ V+ A+ L M ++G+ +A+ YN+++ GL +GR
Sbjct: 106 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 165
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + +M ++ + P ++T+T+++ + K G A K+ + M R P TYN
Sbjct: 166 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 225
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+V++A + M+ G PD +TY+ L+ CK ++D ++ +EM RG
Sbjct: 226 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 285
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D T +I + + D A F M R P+ T+ L
Sbjct: 286 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL 328
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 46 AGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELD 102
AG+ + W+ DMV ++ F ++D K+G+ A + + + R+ +D
Sbjct: 158 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 217
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
P V YN L+NG V +A++ M + P+VVTY TL+ G+C+ +RVD
Sbjct: 218 ----PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 273
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+L +EM + G+ + I YNT+I G +AGR + + R + P + TY+ L+
Sbjct: 274 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLY 330
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL----------- 271
G C +E A + + M TTYN K G VEDA +L
Sbjct: 331 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 390
Query: 272 ------------------------YRKMIESGYTP 282
YRKM E G P
Sbjct: 391 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 20/181 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K+K D L + V D ++ +T +I+ Y +AG +AA F +
Sbjct: 261 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT---IIQGYFQAGRPDAAQEIF---S 314
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRK----ELDQSWAPTVRVYNILL 116
+D N + + ILL LC RV+ A F + ELD + YNI++
Sbjct: 315 RMDSRPNIRT----YSILLYGLCMNWRVEKALVLFENMQKSEIELD------ITTYNIVI 364
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G + NV+DA + + + + P+VV+Y T++ G+CR R+ D++ L ++M+++G+
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424
Query: 177 P 177
P
Sbjct: 425 P 425
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-FEILLDSLCKQ 85
+PD V+ +T LI + ++ V+ F +M + G ++ + ++ +
Sbjct: 252 LPDVVTYNT---LINGFCKSKRVDEGTKLFR-----EMAQRGLVGDTITYNTIIQGYFQA 303
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR AA E F + P +R Y+ILL G + V+ A + M+K + ++
Sbjct: 304 GRPDAAQEIFSRMDS-----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
TY ++ G C++ V+ A L + + +G++P+ + Y T+I G
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 402
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%)
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI LPS ++ +K + ++L+ M G D +Y+I++ LC+ +
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+A+ V +M G + D+ T + LI+ C+ + +A M G P + +
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120
Query: 360 LNDEFKKRGMTALAQKL 376
+ D K G+ A +L
Sbjct: 121 IIDGSCKIGLVNDAVEL 137
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 139/273 (50%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YNI++N R A +M K P+VVT +L+ G+C+ RV AI LV +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G P+ ++YNT+IDG + G + + +R VTY SLV G C +G
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A+++++ M+ R +P+ T+ F K GK +AM LY +M PD TY+ L+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC ++D A Q+ M +GC D+ T LI+ C+ + DE + F +M +RGLV
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
+T+ + + + G AQ++ + M S P
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 140/268 (52%), Gaps = 5/268 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ C+ RV A + K +E+ + P V +YN +++G + V DA + M +
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEM--GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ V + VTY +LV G C R A RL+++M I PN I + VID V+ G+F E
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E P + TY SL+ G C G ++ A ++L +M+++G LP TYN
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K +V++ L+R+M + G D +TY+ +++ + + D A ++ M R
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--- 379
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDM 345
++ T ++L++ LC ++ ++A FE+M
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENM 407
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 155/300 (51%), Gaps = 5/300 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F ++ ++D CK G V A E F R E D A V YN L+ G S D
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFD-RMERDGVRADAV-TYNSLVAGLCCSGRWSD 227
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A R +M ++ PNV+T+ +++ + + + A++L +EM + ++P+ YN++I+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL GR +E M++ + P +VTY +L+ G+CK+ ++ +K+ + M RG +
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TYN + + + G+ + A ++ +M P+ TY ILL LC +++ A+ +
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ M+ ++D+ T ++IH +C++ ++A F + +GL P +++ + F ++
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+++ LC+ R A K + + P V + L+NG+ + V DA +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKF--GYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VV Y T+++G C++ V+ A+ L M ++G+ +A+ YN+++ GL +GR
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + +M ++ + P ++T+T+++ + K G A K+ + M R P TYN
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+V++A + M+ G PD +TY+ L+ CK ++D ++ +EM RG
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
D T +I + + D A F M R + Y
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 46 AGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELD 102
AG+ + W+ DMV ++ F ++D K+G+ A + + + R+ +D
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
P V YN L+NG V +A++ M + P+VVTY TL+ G+C+ +RVD
Sbjct: 277 ----PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+L +EM + G+ + I YNT+I G +AGR + + R + P + TY+ L+
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLY 389
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL----------- 271
G C +E A + + M TTYN K G VEDA +L
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 272 ------------------------YRKMIESGYTP 282
YRKM E G P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 119/259 (45%)
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S N+++ + +M + P++V + ++ + + D I L M GI +
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN VI+ L RF ++ + + P +VT +SL+ G+C+ + A ++ M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
GF P YN K G V DA+ L+ +M G D +TY+ L+ LC +
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ ++M R ++ T T +I + + KF EA +E+M RR + P T+ L
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 362 DEFKKRGMTALAQKLCNVM 380
+ G A+++ ++M
Sbjct: 287 NGLCMHGRVDEAKQMLDLM 305
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 20/181 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K+K D L + V D ++ +T +I+ Y +AG +AA E +
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT---IIQGYFQAGRPDAAQ---EIFS 373
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRK----ELDQSWAPTVRVYNILL 116
+D N + + ILL LC RV+ A F + ELD + YNI++
Sbjct: 374 RMDSRPNIRT----YSILLYGLCMNWRVEKALVLFENMQKSEIELD------ITTYNIVI 423
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G + NV+DA + + + + P+VV+Y T++ G+CR R+ D++ L ++M+++G+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 177 P 177
P
Sbjct: 484 P 484
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-FEILLDSLCKQ 85
+PD V+ +T LI + ++ V+ F +M + G ++ + ++ +
Sbjct: 311 LPDVVTYNT---LINGFCKSKRVDEGTKLFR-----EMAQRGLVGDTITYNTIIQGYFQA 362
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR AA E F + P +R Y+ILL G + V+ A + M+K + ++
Sbjct: 363 GRPDAAQEIFSRMDS-----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
TY ++ G C++ V+ A L + + +G++P+ + Y T+I G
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 172/372 (46%), Gaps = 41/372 (11%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ +LI+ GM + A+ + V N + + IL+D LC++G+++ A
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHT----YTILIDRLCREGKIEEA 354
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F RK L P + +N L+NG+ + V A + M K N PN+ TY L+
Sbjct: 355 NGVF--RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 412
Query: 152 EGYCR----------LRRV-------DR------------------AIRLVKEMRKEGIE 176
EG CR LRRV DR A + M G+E
Sbjct: 413 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE 472
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ + +IDGL + GR E+ +G++ + VT+T+L+ G+CK G + +
Sbjct: 473 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 532
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M+ L + T+N F K K+ +A + KM++ G P +T+ IL++ C+
Sbjct: 533 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 592
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ L++++ + MK GC ++ T T++I+ LC + +EA M G+ P++ T
Sbjct: 593 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 652
Query: 357 FKRLNDEFKKRG 368
+ L K G
Sbjct: 653 YAVLVKAHVKAG 664
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 149/286 (52%), Gaps = 1/286 (0%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C++ + A F K + +++ P Y+IL++G + +++A + EM ++ P
Sbjct: 240 CRRDDLGEAFRVFEKMSK-EENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 298
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ TY L++ C + D+A++++ EM + PN Y +ID L G+ EE +G+
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L P ++T+ +L+ GYCK G + A ++L +M P+ TYN +
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
K A L R+++++G PDR+TY+IL+ CKE +L++A + M G + D T
Sbjct: 419 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 478
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T LI LC++ + ++A+ M+++G+ +TF L D K G
Sbjct: 479 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 524
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 156/349 (44%), Gaps = 43/349 (12%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N + + IL+ LC+ GR++ A + K++ +++ P+ R Y +L+
Sbjct: 259 ENCRPNSVTYSILIHGLCEAGRLEEAFQL--KQEMVEKGCQPSTRTYTVLIKAKCDIGMT 316
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A + EM + PNV TY L++ CR +++ A + ++M K G+ P I +N +
Sbjct: 317 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
I+G + G V + V E G P + TY L++G C+ A +L+ ++
Sbjct: 377 INGYCKEGW---VVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 433
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G LP TYN F K G++ A N++ M +G PD T+ L+ LCK +L+
Sbjct: 434 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 493
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRM------------------------------ 332
A + M +G +D T T LI C++
Sbjct: 494 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 553
Query: 333 -----YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
YK +EA+A M++ GLVP +T L + + G TAL+ K+
Sbjct: 554 ALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 602
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 153/366 (41%), Gaps = 35/366 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLCKQGRVKA 90
TF LI + G +E A MVK G SL F L+D CK G+ K
Sbjct: 477 TFTALIDGLCKLGRLEQANGILG-----SMVK---KGISLDEVTFTALIDGHCKIGKAKD 528
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
F E T +N L+ + + +A +M K + P+VVT+ L
Sbjct: 529 VCFLFENMVE--NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 586
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+EG+CR ++++++ M++ G PN Y +I+GL GR EE ++
Sbjct: 587 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 646
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF------------RY 258
P TY LVK + KAG L+ A +I+ M+ G P+ Y+ R
Sbjct: 647 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARA 706
Query: 259 FSKFGKV--------EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
S G + E+ N I+ P Y+ L+ LCKE ++ A Q++++M
Sbjct: 707 LSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDM 766
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G D S+++ H C+ K+D + ++ VP + ++ + + G
Sbjct: 767 VKHGLFPDKAISSIIEHY-CKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRV 825
Query: 371 ALAQKL 376
AQKL
Sbjct: 826 QEAQKL 831
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 41/317 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y + G V +A + N + + L++ LC+ K+ +
Sbjct: 372 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT----YNELMEGLCRVS--KSYKAF 425
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R+ +D P YNIL++G+ + + A + M + P+ T+ L++G
Sbjct: 426 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 485
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------------------- 194
C+L R+++A ++ M K+GI + + + +IDG + G+
Sbjct: 486 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 545
Query: 195 ---------------FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
E + M+ + + P++VT+T L++G+C+AG+ + K+L+
Sbjct: 546 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 605
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G P+ TY G+VE+A + M G +P+ TY +L+K K +
Sbjct: 606 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 665
Query: 300 LDLAIQVSKEMKCRGCD 316
LD A Q+ M GC
Sbjct: 666 LDRAFQIVSTMVKNGCQ 682
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ +L A + + M EG I Y TV++ L + G + + L
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKV 265
G TSLV C+ DL A ++ KM P+ TY+ + G++
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E+A L ++M+E G P TY +L+K C D A+++ EM + C ++ T T+L
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I LCR K +EA+ F M++ GL P +TF L + + K G A +L +VM
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 396
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 151/356 (42%), Gaps = 39/356 (10%)
Query: 20 DKIGGHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFE 76
+ I G V +S D TF LI + + G + + FE +MV+N + A F
Sbjct: 495 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE-----NMVENRCLTTAHTFN 549
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
LD+L K ++ A+ K + P+V + IL+ G R+ + + M+
Sbjct: 550 CFLDALGKDYKLNEANAMLGKM--MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 607
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-- 194
+ +PNV TY ++ G C RV+ A ++ M G+ PN Y ++ V+AGR
Sbjct: 608 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 667
Query: 195 --FEEVSGMMERFLVCEPGPTMVTYTSLVKGYC------------KAGDLEGAS------ 234
F+ VS M++ C+P + Y++L+ G+ GDL+ S
Sbjct: 668 RAFQIVSTMVKNG--CQPNSHI--YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEN 723
Query: 235 --KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
L I + +P+ YN+ K G++ +A L + M++ G PD+ I ++
Sbjct: 724 DNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IE 782
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
CK K D ++ K + + +IH L + EA D++R
Sbjct: 783 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 838
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 32/296 (10%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP V T ILI + RAG ++ E N + + I+++ LC G
Sbjct: 577 VPSVV---THTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT----YTIIINGLCNNG 629
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
RV+ A S P Y +L+ ++ + A + M K PN
Sbjct: 630 RVEEAETILFSMSSFGVS--PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 687
Query: 147 YGTLVEGYCRLRRV--DRAIR-------------------LVKEMRKEGIEPNAIVYNTV 185
Y L+ G+ RA+ L E++K G+ P +YN +
Sbjct: 688 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFL 746
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ GL + GR E + + + P +S+++ YCK + + +K+++ F
Sbjct: 747 VVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKF 805
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+PS +Y + G+V++A L ++ + + ++ L KE++ D
Sbjct: 806 VPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDD 861
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 48/205 (23%)
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M GF S Y+ +K A +YR+M+ G+ + Y ++ LCK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206
Query: 297 E-----------------------------------DKLDLAIQV----SKEMKCRGCDI 317
D L A +V SKE CR +
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
T ++LIH LC + +EA ++M+ +G P T+ L GMT A K+
Sbjct: 267 ---TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKML 323
Query: 378 NVMSS---VPRSME---LLDSRCKD 396
+ M++ VP L+D C++
Sbjct: 324 DEMATKACVPNVHTYTILIDRLCRE 348
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 28/334 (8%)
Query: 75 FEILLDSLCKQGRVKAASEYFH----------------------------KRKELDQSWA 106
+ ILL+ LC + R + A E H K LDQ +
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKMLDQRIS 113
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V YN ++ +++ V A M K V P+ +TY ++V G+C + AI
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 173
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+K+MR +G+EP+ + YN+++D L + GR E + + P + TY +L++GY
Sbjct: 174 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L +L +M+ G P+ ++ ++K KVE+AM ++ KM + G P+ +T
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ +LCK +++ A+ ++M G D LIH LC K+++A F +M+
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
RG+ + F + D K G + KL ++M
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ +LCK V A E + P YN +++G+ S K+A F +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTM--VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKK 176
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + V P+VVTY +L++ C+ R A ++ M K G++P+ Y T++ G G
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ G+++ + P ++ LV Y K +E A + M +G P+ TY
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+VEDAM + +MI+ G PD + Y+ L+ LC DK + A ++ EM RG
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +I C+ + E+ F+ M+R G+ P +T R
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRF 402
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 30/295 (10%)
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA-------------------------ER 130
H EL + P V YNILLNG ++A
Sbjct: 38 HVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 131 FWLE-----MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
F+ E M + ++PNVVTY +++ C+ + VD+A+ ++ M K G+ P+ + YN++
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ G +G+ +E +++ P +VTY SL+ CK G A KI M RG
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P TTY + ++ G + + L M+ +G P+ + IL+ K++K++ A+
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
V +M+ +G + + T +I +LC+ + ++A FE MI GL P + + L
Sbjct: 278 VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE--PNAIVYN 183
+DA + E+ + + P+V +Y L+ G C R A+ L+ M +G + P+ + Y+
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
TVI+G F+E G +++ L P +VTY S++ CKA ++ A ++L M+
Sbjct: 93 TVINGF-----FKE--GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G +P TYN F G+ ++A+ +KM G PD +TY+ L+ LCK + A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ M RG D+ T L+ E + M+R G+ P++ F L
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265
Query: 364 FKKR 367
+ K+
Sbjct: 266 YAKQ 269
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 180/423 (42%), Gaps = 61/423 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L + +PD + T+ ++ + +G + AI +
Sbjct: 122 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCM---TYNSIVHGFCSSGQPKEAIVFLKKMR 178
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE------------LDQSWA-- 106
+ + + L+D LCK GR A + F + L Q +A
Sbjct: 179 S----DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATK 234
Query: 107 -------------------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
P V++IL+ + + + V++A + +MR++ + PN VTY
Sbjct: 235 GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTY 294
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
GT+++ C+ RV+ A+ ++M EG+ P++IVYN++I L ++E+ + L
Sbjct: 295 GTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD 354
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT-----------YNYFF 256
+ + + S++ +CK G + + K+ +M+ G P T Y+ F
Sbjct: 355 RGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFV 414
Query: 257 RYFSKFGKVEDA----------MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
+ F + + N S P TY+I+L LCK D A+++
Sbjct: 415 NIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRM 474
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ + ++ T ++I L ++ + DEA F GLVP+Y T++ + +
Sbjct: 475 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 534
Query: 367 RGM 369
+G+
Sbjct: 535 QGL 537
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTYT 218
A + E+ + GI P+ YN +++GL + R +E ++ ++ + G P +V+Y+
Sbjct: 36 ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLH--IMADDGGDCPPDVVSYS 92
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G+ K GDL+ K+L IS P+ TYN K V+ AM + M++S
Sbjct: 93 TVINGFFKEGDLD---KMLDQRIS----PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY+ ++ C + AI K+M+ G + D+ T L+ LC+ + EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM 247
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 27/304 (8%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL+ YA+ VE A+ F + + A + ++D LCK GRV+ A YF
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQ----QGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 314
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ P VYN L++ + AE +LEM + + + + ++++ +C
Sbjct: 315 EQM--IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHC 372
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNT-----------------VIDGLVEAGRFEEV 198
+ RV + +L M + G++P+ I + + G E+
Sbjct: 373 KEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKE 432
Query: 199 SGMMER----FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + GP + TY ++ G CK + A ++ + + T+N
Sbjct: 433 TPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 492
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+ ++A +L+ +G P+ TY ++ + + + L+ Q+ M+ G
Sbjct: 493 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 552
Query: 315 CDID 318
C +D
Sbjct: 553 CTVD 556
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 11/184 (5%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ S P + YNI+L+G ++K DA R + + ++ T+ +++ ++ R D
Sbjct: 445 NSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRND 504
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL- 220
A L G+ PN Y + + ++ G EE+ + FL E V L
Sbjct: 505 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD---QLFLSMEDNGCTVDSGMLN 561
Query: 221 --VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL----YRK 274
V+ + G++ A L M+ + F +T + F S GK ++ Y+
Sbjct: 562 FIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQEYHIFLPEKYKS 620
Query: 275 MIES 278
IES
Sbjct: 621 FIES 624
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 155/302 (51%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L S+C GR + A + + V VY+ +++G F+ V +A + E
Sbjct: 177 YSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHE 236
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V PNVVTY +++ C+ R VD+A ++++M G++P+ + YNT+I G G+
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+++ M + P VT ++ V CK G +E A + M+++G + +Y+
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + D NL+ M+ G P++ ++IL+ K + A+ + ++M+ RG
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ D+ T +IH CRM D+A +F MI +G+ P++ ++ L F G A+
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE 476
Query: 375 KL 376
+L
Sbjct: 477 EL 478
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 146/303 (48%), Gaps = 2/303 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++ L K+G+V A + FH+ + Q P V YN +++ +++ V A+
Sbjct: 213 VYSTVVHGLFKEGKVGEACDLFHEMTQ--QGVPPNVVTYNSVIHALCKARAVDKAQGILR 270
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M V P+ VTY TL+ GY L + +A+R+ KEM G+ PN + +T + L + G
Sbjct: 271 QMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHG 330
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R EE + L +++Y++L+ GY AG L S + +M+ G +P+ +N
Sbjct: 331 RIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFN 390
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
++K G V +AM ++ M + G PD LTY ++ C+ +D A+ M +
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + + LI C +A ++ +GL P L+F L + K G A
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510
Query: 374 QKL 376
Q++
Sbjct: 511 QRI 513
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 180/402 (44%), Gaps = 15/402 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L +G PD V+ +T LI Y+ G + A+ F+
Sbjct: 252 VIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNT---LIHGYSTLGQWKQAVRMFKEMT 308
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ N + ++ L CK GR++ A E+F L + + Y+ LL+G+
Sbjct: 309 SRGVIPNTVTCSTFVAFL----CKHGRIEEAREFFDSM--LAKGHKLNIISYSTLLHGYA 362
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + D + M ++ + PN + LV GY + V A+ + ++M+K G+ P+ +
Sbjct: 363 TAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVL 422
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y VI G ++ + P Y L++G+C GDL A +++ +
Sbjct: 423 TYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI 482
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++G P ++ + K G+V +A ++ +I +G D + L+ C K+
Sbjct: 483 RNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKM 542
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A +V M G + D+ T L++ C+ + D+ F +++ +G+ P T+ +
Sbjct: 543 SEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGII 602
Query: 361 NDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCKD 396
D G TA A+++ + ++P LL C++
Sbjct: 603 LDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRN 644
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 8/350 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKA 90
++ F IL+ YA+ GMV A++ FE DM K + + ++ + C+ G +
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFE-----DMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + F+ +D+ P VY L+ G+ ++ AE E+R + + P ++++ +L
Sbjct: 440 AMDKFNHM--IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASL 497
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ C+ RV A R+ + + G + + ++ ++IDG G+ E + + +
Sbjct: 498 INHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGI 557
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +VTY +LV G CK G ++ + + ++ +G P+ TY G+ A
Sbjct: 558 EPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKE 617
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++++MIESG TY ILL LC+ + + AI V +++ D+ ++I +
Sbjct: 618 MFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMF 677
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ + +EA F + GLVP T+ + + K G A+ + +VM
Sbjct: 678 KARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVM 727
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 38/301 (12%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR- 165
PTV Y+IL++ R++ + A F+ + ++ + +V+ +L+ G C +R D A+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 166 LVKEMRKEGIEPNAI-------------------------------------VYNTVIDG 188
L M + G P+AI VY+TV+ G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + G+ E + P +VTY S++ CKA ++ A IL+ M+ G P
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN +S G+ + A+ ++++M G P+ +T + LCK +++ A +
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M +G +++ + + L+H + S F M+R G+VP+ F L + + K G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 369 M 369
M
Sbjct: 401 M 401
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 12/269 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGA--SLFEILLDSLCKQGRVKAAS 92
+F LI + G V FE DM+ A ++F L+D C G++ S
Sbjct: 493 SFASLINHLCKEGRV------FEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKM---S 543
Query: 93 EYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E F + P + Y L+NG ++ + D + E+ + V P TYG ++
Sbjct: 544 EAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIIL 603
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G R A + +EM + GI Y+ ++ GL EE + ++
Sbjct: 604 DGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVK 663
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
+V ++ KA E A + + G +P+ TY K G VE+A +
Sbjct: 664 FDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGV 723
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ M++SG +P +++++ L ++ ++
Sbjct: 724 FSVMLKSGLSPTSHFINVIVRTLLEKGEI 752
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE-VSG 200
P V TY L++ CR RR+D A + ++G++ + IV ++++ GL +A R +E V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ R P ++Y++++K C G + A IL+M + +G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQG---------------- 204
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
G + + Y ++ L KE K+ A + EM +G ++
Sbjct: 205 -----------------GGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVV 247
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T +IH LC+ D+A M+ G+ P +T+ L + G A ++ M
Sbjct: 248 TYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEM 307
Query: 381 SS 382
+S
Sbjct: 308 TS 309
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 171/348 (49%), Gaps = 13/348 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ++++ V++A+ V N + +++ L+ SL K RV A +
Sbjct: 213 TFGVVMKALCAVNEVDSALSVLRDMTKHGCVPN----SVIYQTLIHSLSKCNRVNEALQL 268
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P +N ++ G + + +A + M TP+ +TYG L+ G
Sbjct: 269 LEEM--FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGL 326
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C++ RVD A L + K P ++++NT+I G V GR ++ ++ +V G P
Sbjct: 327 CKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSD-MVTSYGIVP 381
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ TY SL+ GY K G + A ++L+ M ++G P+ +Y F K GK+++A NL
Sbjct: 382 DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLL 441
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M G P+ + ++ L+ CKE ++ A+++ +EM +GC D+ T LI LC +
Sbjct: 442 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 501
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ A DMI G+V + +T+ L + F +RG A+KL N M
Sbjct: 502 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 180/374 (48%), Gaps = 14/374 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K + A LL + VPD + + ++ + ++ R EAA + N
Sbjct: 252 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN--EAA----KMVN 305
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +++ F + L++ LCK GRV AA + F++ + PT ++N L++G+
Sbjct: 306 RM-LIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK------PTSVIFNTLIHGFV 358
Query: 121 RSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ DA+ +M + P+V TY +L+ GY + V A+ ++++MR +G +PN
Sbjct: 359 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNV 418
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y ++DG + G+ +E ++ P V + L+ +CK + A +I +
Sbjct: 419 YSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 478
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G P T+N + +++ A+ L R MI G + +TY+ L+ + +
Sbjct: 479 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 538
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ A ++ EM +G +D T LI LCR + D+A + FE M+R GLVP ++
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598
Query: 360 LNDEFKKRGMTALA 373
L + + GM A
Sbjct: 599 LINGLCRSGMVEEA 612
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 172/361 (47%), Gaps = 10/361 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I D A +L D + + VPD + ++ LI Y + G+V A+
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS---LIYGYWKKGLVGLALEVLRDM 409
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N N S + IL+D CK G++ A ++ P +N L++ +
Sbjct: 410 RNKGCKPNVYS----YTILVDGFCKLGKIDEAYNLLNEMSA--DGLKPNTVGFNCLISAF 463
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A + EM ++ P+V T+ +L+ G C + + A+ L+++M EG+ N
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+I+ + G +E ++ + +TY SL+KG C+AG+++ A + +
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G +PS + N + G VE+A+ ++M+ G TPD +T++ L+ LC+ +
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 643
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ + + ++++ G D T L+ LC+ +A ++ I G VP+ T+
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSI 703
Query: 360 L 360
L
Sbjct: 704 L 704
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 32/295 (10%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
S PT + YN++L K A + +M + P + T+G +++ C + VD A
Sbjct: 171 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSA 230
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ ++++M K G PN+++Y T+I L + R E ++E + P T+ ++ G
Sbjct: 231 LSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 290
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK--------- 274
CK + A+K++ M+ RGF P TY Y K G+V+ A +L+ +
Sbjct: 291 LCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIF 350
Query: 275 ----------------------MIES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
M+ S G PD TY+ L+ K+ + LA++V ++M+
Sbjct: 351 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMR 410
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+GC ++ + T+L+ C++ K DEA +M GL P+ + F L F K
Sbjct: 411 NKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ LC+ +K A + R + + YN L+N + R +K+A + E
Sbjct: 491 FNSLISGLCEVDEIKHA--LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 548
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + +TY +L++G CR VD+A L ++M ++G+ P++I N +I+GL +G
Sbjct: 549 MVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGM 608
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE + ++ P +VT+ SL+ G C+AG +E + + + + G P TYN
Sbjct: 609 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNT 668
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+ K G V DA L + IE G+ P+ T+ ILL+ L ++ LD
Sbjct: 669 LMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 13/219 (5%)
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM---ERFLVCEPGPTMVTYTS-- 219
RL+ +M+ EGI ++ +++ +AG + + +M CEP T +Y
Sbjct: 126 RLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEP--TFKSYNVVL 183
Query: 220 --LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
LV G C + A+ + M+SR P+ T+ + +V+ A+++ R M +
Sbjct: 184 EILVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTK 239
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G P+ + Y L+ L K ++++ A+Q+ +EM GC D +T +I LC+ + +E
Sbjct: 240 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 299
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A+ M+ RG P +T+ L + K G A+ L
Sbjct: 300 AAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK L +A E D A L + VP +S + ILI R+GMVE A+ EF
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN---ILINGLCRSGMVEEAV---EFQK 617
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +++ F L++ LC+ GR++ F K + + P YN L++
Sbjct: 618 EM-VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA--EGIPPDTVTYNTLMSWLC 674
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ V DA E ++ PN T+ L++ +DR
Sbjct: 675 KGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 172/372 (46%), Gaps = 41/372 (11%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ +LI+ GM + A+ + V N + + IL+D LC++G+++ A
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHT----YTILIDRLCREGKIEEA 288
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F RK L P + +N L+NG+ + V A + M K N PN+ TY L+
Sbjct: 289 NGVF--RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 346
Query: 152 EGYCR----------LRRV-------DR------------------AIRLVKEMRKEGIE 176
EG CR LRRV DR A + M G+E
Sbjct: 347 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE 406
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ + +IDGL + GR E+ +G++ + VT+T+L+ G+CK G + +
Sbjct: 407 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 466
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M+ L + T+N F K K+ +A + KM++ G P +T+ IL++ C+
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ L++++ + MK GC ++ T T++I+ LC + +EA M G+ P++ T
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 586
Query: 357 FKRLNDEFKKRG 368
+ L K G
Sbjct: 587 YAVLVKAHVKAG 598
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 149/286 (52%), Gaps = 1/286 (0%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C++ + A F K + ++S P Y+IL++G + +++A + EM ++ P
Sbjct: 174 CRRDDLGEAFRVFEKMSK-EESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 232
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ TY L++ C + D+A++++ EM + PN Y +ID L G+ EE +G+
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 292
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L P ++T+ +L+ GYCK G + A ++L +M P+ TYN +
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
K A L R+++++G PDR+TY+IL+ CKE +L++A + M G + D T
Sbjct: 353 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 412
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T LI LC++ + ++A+ M+++G+ +TF L D K G
Sbjct: 413 TALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 458
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 41/316 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI Y + G V +A + N + + L++ LC+ K+ +
Sbjct: 306 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRT----YNELMEGLCRVS--KSYKAF 359
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R+ +D P YNIL++G+ + + A + M + P+ T+ L++G
Sbjct: 360 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 419
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------------------- 194
C+L R+++A ++ M K+GI + + + +IDG + G+
Sbjct: 420 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 479
Query: 195 ---------------FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
E + M+ + + P++VT+T L++G+C+AG+ + K+L+
Sbjct: 480 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 539
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G P+ TY G+VE+A + M G +P+ TY +L+K K +
Sbjct: 540 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 599
Query: 300 LDLAIQVSKEMKCRGC 315
LD A Q+ M GC
Sbjct: 600 LDRAFQIVSTMVKNGC 615
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 157/382 (41%), Gaps = 51/382 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLCKQGRVKA 90
TF LI + G +E A MVK G SL F L+D CK G+ K
Sbjct: 411 TFTALIDGLCKLGRLEQANGILG-----SMVK---KGISLDEVTFTALIDGHCKIGKAKD 462
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
F E T +N L+ + + +A +M K + P+VVT+ L
Sbjct: 463 VCFLFENMVE--NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 520
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+EG+CR ++++++ M++ G PN Y +I+GL GR EE ++
Sbjct: 521 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 580
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF------------RY 258
P TY LVK + KAG L+ A +I+ M+ G P+ Y+ R
Sbjct: 581 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARA 640
Query: 259 FSKFGKVED-------------AMNLYRKM-----------IESGYTPDRLTYHILLKIL 294
S G ++ + +++R M I+ P Y+ L+ L
Sbjct: 641 LSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGL 700
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CKE ++ A Q++++M G D S+++ H C+ K+D + ++ VP +
Sbjct: 701 CKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY-CKTCKYDNCLEFMKLVLDNKFVPSF 759
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
++ + + G AQKL
Sbjct: 760 ASYCWVIHGLRNEGRVQEAQKL 781
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ +L A + + M EG I Y TV++ L + G + + L
Sbjct: 96 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKV 265
G TSLV C+ DL A ++ KM P+ TY+ + G++
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
E+A L ++M+E G P TY +L+K C D A+++ EM + C ++ T T+L
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I LCR K +EA+ F M++ GL P +TF L + + K G A +L +VM
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 330
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 119/312 (38%), Gaps = 48/312 (15%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP V T ILI + RAG ++ E N + + I+++ LC G
Sbjct: 511 VPSVV---THTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT----YTIIINGLCNNG 563
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
RV+ A S P Y +L+ ++ + A + M K PN
Sbjct: 564 RVEEAETILFSMSSFGVS--PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 621
Query: 147 YGTLVEGYC-------------------------------------RLRRVDRAIRLVKE 169
Y L+ G+ RL VD A+++ E
Sbjct: 622 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE 681
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
++K G+ P +YN ++ GL + GR E + + + P +S+++ YCK
Sbjct: 682 IKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCK 739
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ + +K+++ F+PS +Y + G+V++A L ++ + +
Sbjct: 740 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTP 799
Query: 290 LLKILCKEDKLD 301
++ L KE++ D
Sbjct: 800 SIEFLMKEEEDD 811
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 48/205 (23%)
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M GF S Y+ +K A +YR+M+ G+ + Y ++ LCK
Sbjct: 81 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140
Query: 297 E-----------------------------------DKLDLAIQV----SKEMKCRGCDI 317
D L A +V SKE CR +
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
T ++LIH LC + +EA ++M+ +G P T+ L GMT A K+
Sbjct: 201 ---TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKML 257
Query: 378 NVMSS---VPRSME---LLDSRCKD 396
+ M++ VP L+D C++
Sbjct: 258 DEMATKACVPNVHTYTILIDRLCRE 282
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 170/335 (50%), Gaps = 13/335 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI G V+ A+ ++ +MVK + + LL+ C+ G++K E
Sbjct: 292 TYSSLICGLCDVGNVDGAVEVYK-----EMVKRSVVVDVVTYNALLNGFCRAGKIK---E 343
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + + V YNI + G F ++ V++A W +R+ + TYG L+ G
Sbjct: 344 SFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHG 403
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF--LVCEPG 211
C+ +++A++++KE + G + +A Y++++DGL + GR +E G++ + CE
Sbjct: 404 LCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELS 463
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + L+ G+ +A LE A + M ++G P+ +YN K + DA +
Sbjct: 464 PHVCN--PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSF 521
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++M+E + PD +TY +L+ LC+ K+D+A+ + +++ +G + D+ +L+H LC
Sbjct: 522 VKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCS 581
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
K ++A + +M + +P+ +T L D K
Sbjct: 582 AGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYK 616
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 43/328 (13%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
K +E S W LL + G + T+ +LI + G + A+ + A D
Sbjct: 374 KVEEAISVWELLRRRGSGAD------STTYGVLIHGLCKNGHLNKALKILKEAK--DGGD 425
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHK----------------------------- 97
D+ A + ++D L KQGRV A H+
Sbjct: 426 KLDAFA--YSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEA 483
Query: 98 ----RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
R+ + +PTV YN L+NG +++ DA F EM +++ P+++TY L++G
Sbjct: 484 ICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDG 543
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +++D A+ L +++ +G+EP+ ++N ++ GL AG+ E+ + P
Sbjct: 544 LCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPN 603
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VT+ +L+ G KA + E AS I M GF P +YN + G++ D + L+
Sbjct: 604 LVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFD 663
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLD 301
+++G P +T++IL++ + K LD
Sbjct: 664 DALKNGILPTSITWYILVRAVLKLGPLD 691
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 168/356 (47%), Gaps = 21/356 (5%)
Query: 6 AKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV 65
K KE W ++ G + VS + F IR VE AI +E ++
Sbjct: 339 GKIKESFELWVMM----GKENCHNVVSYNIF---IRGLFENRKVEEAISVWE------LL 385
Query: 66 KNFDSGA--SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+ SGA + + +L+ LCK G + A + + K D Y+ +++G +
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAK--DGGDKLDAFAYSSIVDGLSKQG 443
Query: 124 NVKDAERFWLEMRKEN--VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
V +A +M K ++P+V L+ G+ R +++ AI +EM +G P +
Sbjct: 444 RVDEALGIVHQMDKYGCELSPHVCN--PLINGFVRASKLEEAICFFREMETKGCSPTVVS 501
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YNT+I+GL +A RF + ++ L + P M+TY+ L+ G C+ ++ A + + ++
Sbjct: 502 YNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVL 561
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+G P T +N GK+EDA+ LY M +S P+ +T++ L+ L K + +
Sbjct: 562 VKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECE 621
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+A + M G D+ + + + LC + + A F+D ++ G++P +T+
Sbjct: 622 MASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITW 677
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 163/344 (47%), Gaps = 26/344 (7%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ L+ + A ++E A + + ++ N + + IL+ K+ ++
Sbjct: 116 SYNALLNAFIEANLLEKAESFLAYFETVGILPNLQT----YNILIKISVKK------RQF 165
Query: 95 FHKRKELDQSWA----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ LD W+ P V Y ++NG +S ++ A + EM + + P+V+ Y +
Sbjct: 166 VEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIM 225
Query: 151 VEGYCRLRRVDRAI------RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
++G+ +R D RLVK + PN + YN +I+GL + GRF+E M ER
Sbjct: 226 IDGF--FKRGDYVQGKEIWERLVK---GSCVYPNVVTYNVMINGLCKMGRFDESLEMWER 280
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
E + TY+SL+ G C G+++GA ++ K M+ R + TYN F + GK
Sbjct: 281 MKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGK 340
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
++++ L+ M + + ++Y+I ++ L + K++ AI V + ++ RG D T +
Sbjct: 341 IKESFELWVMMGKEN-CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGV 399
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LIH LC+ ++A ++ G + + D K+G
Sbjct: 400 LIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQG 443
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P + +Y L+ + +++A + GI PN YN +I V+ +F E G+
Sbjct: 112 PGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGL 171
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
++ + P + +Y +++ G K+GDL A ++ M RG +P YN F K
Sbjct: 172 LDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFK 231
Query: 262 FGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
G ++ ++++ S P+ +TY++++ LCK + D ++++ + MK C++DL
Sbjct: 232 RGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLF 291
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T + LI LC + D A +++M++R +V +T+ L + F + G
Sbjct: 292 TYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAG 339
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 10/266 (3%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
+L + K A + F K +E+ P +R YN LLN + + ++ AE F
Sbjct: 84 VLKAYAKSKMPNEALDCFQKMEEI-FGCKPGIRSYNALLNAFIEANLLEKAESFLAYFET 142
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG---- 193
+ PN+ TY L++ + R+ A L+ M + ++P+ Y TVI+G+V++G
Sbjct: 143 VGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVS 202
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL-PSPTTY 252
E M ER LV P ++ Y ++ G+ K GD +I + ++ + P+ TY
Sbjct: 203 ALEVFDEMFERGLV----PDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTY 258
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N K G+ ++++ ++ +M ++ D TY L+ LC +D A++V KEM
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEA 338
R +D+ T L++ CR K E+
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGKIKES 344
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ F A+ + + + PD + T+ +L+ + ++ A+ +
Sbjct: 505 LINGLCKAERFSDAYSFVKEMLEKDWKPDMI---TYSLLMDGLCQGKKIDMALNLWRQV- 560
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+VK + ++ IL+ LC G+++ A + K+ + P + +N L++G +
Sbjct: 561 ---LVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQ--SNCLPNLVTHNTLMDGLY 615
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ + A W M K P++++Y ++G C R+ I L + K GI P +I
Sbjct: 616 KARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSI 675
Query: 181 VYNTVIDGLVEAGRFEEVS 199
+ ++ +++ G + +S
Sbjct: 676 TWYILVRAVLKLGPLDSLS 694
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 6/316 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ILI G V A+ E ++++ + S + +L++ LCK G+ A +
Sbjct: 148 TFTILINGLCVKGDVGRAV---ELVDHVEKT-GYRSDVKTYGVLINGLCKMGKTSEAVGW 203
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K +E ++W P V VY+ +++G + V +A LEM + + PN+VTY L++G
Sbjct: 204 LRKMEE--RNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGL 261
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C R A L+ EM K G+ P+ N ++D L + G+ + ++ ++ P +
Sbjct: 262 CNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDV 321
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY SL+ YC ++ A+++ ++M+SRG LP Y + K + AM+L +
Sbjct: 322 FTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDE 381
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI+ G+TPD +T+ L+ C+ + A ++ M G +L T +++ LC+
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441
Query: 335 FDEASAEFEDMIRRGL 350
EA + F M + L
Sbjct: 442 LSEALSLFHAMEKSNL 457
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 165/373 (44%), Gaps = 19/373 (5%)
Query: 25 HEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCK 84
HE+ +K F+ +R ++G +++ F + + + S F +LL + K
Sbjct: 29 HEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVID-FTLLLGFIVK 87
Query: 85 QGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
A KE+ S P + N+++N K V M K + P
Sbjct: 88 MKHYTTAISLV---KEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEP 144
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+VVT+ L+ G C V RA+ LV + K G + Y +I+GL + G+ E G +
Sbjct: 145 SVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWL 204
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P +V Y++++ G CK G + A + M +G P+ TY + F
Sbjct: 205 RKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNF 264
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+ ++A +L +M++ G PD + +IL+ +LCKE K+ A V M G D+ T
Sbjct: 265 GRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTY 324
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI C + DEA+ FE M+ RG +P + + T+L C + +
Sbjct: 325 NSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAY------------TSLIHGWCKI-KN 371
Query: 383 VPRSMELLDSRCK 395
+ ++M LLD K
Sbjct: 372 INKAMHLLDEMIK 384
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + A LL + + +PD S + V ++ + + ++ I
Sbjct: 257 LIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVG 316
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V ++S L+D C Q ++ A+ F + + P + Y L++GW
Sbjct: 317 EVPDVFTYNS-------LIDRYCLQNQMDEATRVFELM--VSRGCLPDIVAYTSLIHGWC 367
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ KN+ A EM K TP+VVT+ TL+ G+C++ R A L M K G PN
Sbjct: 368 KIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQ 427
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++DGL ++ E + +V Y+ ++ G C AG L A ++ +
Sbjct: 428 TCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCL 487
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++G + Y F+K G ++ A +L M E+G PD TY++ ++ L E ++
Sbjct: 488 PAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREI 547
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+I+ M+ +G +D T+ M+I+ L
Sbjct: 548 ARSIKYLTMMRDKGFSVDATTTEMIINYL 576
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 130/284 (45%), Gaps = 2/284 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR K A + ++ P ++ NIL++ + + A+
Sbjct: 254 YTCLIQGLCNFGRWKEAGSLLDEMMKM--GVMPDLQSLNILVDVLCKEGKIMQAKSVIGF 311
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+V TY +L++ YC ++D A R+ + M G P+ + Y ++I G +
Sbjct: 312 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +++ + P +VT+T+L+ G+C+ G A ++ M G +P+ T
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 431
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + +A++L+ M +S + + Y I+L +C KL+ A+++ + +G
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
I++ T++I+ + D+A +M G +P T+
Sbjct: 492 LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYN 535
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
+PD V+ + LI + + + A+ + +M+K F + L+ C+
Sbjct: 353 LPDIVA---YTSLIHGWCKIKNINKAMHLLD-----EMIKVGFTPDVVTWTTLIGGFCQV 404
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR AA E F + Q P ++ I+L+G +S+ + +A + M K N+ N+V
Sbjct: 405 GRPLAAKELFLNMHKYGQ--VPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIV 462
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
Y +++G C +++ A+ L + +G++ N Y +I+G + G ++ ++
Sbjct: 463 IYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNM 522
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
P TY V+G ++ + K L MM +GF TT Y S
Sbjct: 523 EENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLS 577
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 VMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+A +M+ GL P T+ + +EF K+G
Sbjct: 369 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 401
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+ TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + +R L P ++TY +L+ G CK GDL+ A+ ++ M+ +G P T
Sbjct: 260 KGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVL 428
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 2/217 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A+E F + L + P + L++G + V A +
Sbjct: 215 YSVLINGLCKESKMDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKR 272
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +++ P+++TY TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGD 332
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +R + V YT+L+ G C+ G A K+L+ M+S G P TY
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 392
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
F K G V L ++M +G+ P +TY++L+
Sbjct: 393 IINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLM 429
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 148/328 (45%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 58 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRK---V 113
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + K K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G +E + L P TY+ L+ G CK ++ A++
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANE 233
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LC
Sbjct: 234 LFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLC 293
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L A + EM +G D T T LI C+ D A + MI+ + +
Sbjct: 294 KKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 353
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 354 AYTALISGLCQEGRSVDAEKMLREMLSV 381
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 140/301 (46%), Gaps = 4/301 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F SL ++++ ++G+ +AS F E + + V++ L+ + S ++D
Sbjct: 35 FSEAKSLIQVVVS---RKGK-GSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRD 90
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + R+ + T ++E +L+ +E+ + G + +N ++
Sbjct: 91 AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMH 150
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
+ G + + P++V+Y +L+ GY + GDL+ ++ M++ G P
Sbjct: 151 RFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQP 210
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TY+ K K++DA L+ +M+ G P+ +T+ L+ CK+ ++DLA+++
Sbjct: 211 DXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIY 270
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
K M + DL T LI+ LC+ +A+ ++M+ +GL P +T+ L D K
Sbjct: 271 KRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKE 330
Query: 368 G 368
G
Sbjct: 331 G 331
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + A E H+++ + ++ Y L++G + DAE+ E
Sbjct: 320 YTTLIDGCCKEGDLDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + RL+KEM++ G P+ + YN +++G
Sbjct: 378 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ LCK+G + A K ++ V +Y +++ KNV DA + E
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEK--GKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I PN + ++ +ID V+ G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P + TY+SL+ G+C L+ A + ++MIS+ P+ TYN
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +VE+ M L+R+M + G + +TY+ L++ L + D+A ++ K+M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T ++L+ LC+ K ++A FE + + + P T+ + + K G
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 4/304 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ ++D+LC V A F E+D + P V YN L+ DA R
Sbjct: 257 IYTTIIDALCNYKNVNDALNLF---TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M + + PNVVT+ L++ + + ++ A +L EM K I+P+ Y+++I+G
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R +E M E + + P +VTY +L+KG+CKA +E ++ + M RG + + TY
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + + G + A +++KM+ G PD +TY ILL LCK KL+ A+ V + ++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+ D+ T ++I +C+ K ++ F + +G+ P+ + + + F ++G+
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 373 AQKL 376
A L
Sbjct: 554 ADAL 557
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 8/324 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C R+ A + ++ + P +N L++G F +A M
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVME--YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P++ TYGT+V G C+ +D A+ L+K+M K IE + ++Y T+ID L +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ P +VTY SL++ C G AS++L MI R P+ T++
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K GK+ +A LY +MI+ PD TY L+ C D+LD A + + M + C
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T LI C+ + +E F +M +RGLV + +T+ L + G +AQK+
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 378 NVMSS--VPRSM----ELLDSRCK 395
M S VP + LLD CK
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCK 477
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 181/386 (46%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + D A LL G D V T + + Y V A+ F +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN---VNDALNLFTEMD 282
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + L+ LC GR AS +++ P V ++ L++ +
Sbjct: 283 N----KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKINPNVVTFSALIDAFV 336
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +AE+ + EM K ++ P++ TY +L+ G+C R+D A + + M + PN +
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
YNT+I G +A R EE M +R LV G T VTY +L++G +AGD + A KI
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLV---GNT-VTYNTLIQGLFQAGDCDMAQKI 452
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M+S G P TY+ K+GK+E A+ ++ + +S PD TY+I+++ +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
K++ + + +G ++ T +I CR +EA A F +M G +P+ T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L + G A + +L M S
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRS 598
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 131/262 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ++NG + ++ A +M K + +VV Y T+++ C + V+ A+ L
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM +GI PN + YN++I L GR+ + S ++ + + P +VT+++L+ + K
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ MI R P TY+ F ++++A +++ MI P+ +T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ +++ +EM RG + T LI L + D A F+ M+
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D K G
Sbjct: 458 SDGVPPDIITYSILLDGLCKYG 479
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 159/330 (48%), Gaps = 11/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + A LL D I P+ V TF LI + + G + A ++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVV---TFSALIDAFVKEGKLVEAEKLYD--- 349
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + D + L++ C R+ A F + + P V YN L+ G+
Sbjct: 350 --EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTLIKGF 405
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V++ + EM + + N VTY TL++G + D A ++ K+M +G+ P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y+ ++DGL + G+ E+ + E + P + TY +++G CKAG +E +
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ Y F + G E+A L+R+M E G P+ TY+ L++ ++
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ KEM+ G D T +M+I++L
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINML 615
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 134/272 (49%), Gaps = 1/272 (0%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
A TV VYN LLN +K E + EM + P+VVT+ TL++ CR +V A+
Sbjct: 51 QADTV-VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+++EM G+ P+ + T++ G VE G E + R L T VT L+ GY
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G +E A ++ I+ GF P TYN F + V A+ + M++ G+ PD
Sbjct: 170 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
TY+I++ LCK +L+ A + +M RGC D+ T LI LC + +EA
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 289
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ +G+ P TF L + K G LA +L
Sbjct: 290 VTVKGVSPDVYTFNILINALCKVGDPHLALRL 321
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ +LC R++ A + R+ + +P V +NIL+N + + A R +
Sbjct: 265 TTFNTLIAALCTGNRLEEALDL--ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 322
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM+ TP+ VTY TL++ C L ++ +A+ L+K+M G + I YNT+IDGL +
Sbjct: 323 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 382
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R EE + ++ + +T+ +L+ G CK ++ A +++ MIS G P+ TY
Sbjct: 383 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 442
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++ K G ++ A ++ M +G+ D +TY L+ LCK + +A++V + M+
Sbjct: 443 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 502
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+G ++ L R +A + F +M G P LT+K
Sbjct: 503 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 548
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 178/382 (46%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A + +A +L + PD + TF L++ + G +EAA+ A
Sbjct: 95 LMKALCRAHQVRTAVLMLEEMSSRGVAPD---ETTFTTLMQGFVEEGSIEAALRVK--AR 149
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L+M + +L++ CK GRV+ A Y ++E+ + P YN +NG
Sbjct: 150 MLEM--GCSATKVTVNVLINGYCKLGRVEDALGYI--QQEIADGFEPDQITYNTFVNGLC 205
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +V A + M +E P+V TY +V C+ +++ A ++ +M G P+
Sbjct: 206 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 265
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I L R EE + + V P + T+ L+ CK GD A ++ + M
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+ A++L + M +G +TY+ ++ LCK+ ++
Sbjct: 326 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 385
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A +V +M +G + T LI LC+ K D+A MI GL P+ +T+ +
Sbjct: 386 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 445
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ K+G A + M++
Sbjct: 446 LTHYCKQGDIKKAADILETMTA 467
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 172/368 (46%), Gaps = 19/368 (5%)
Query: 45 RAGMVEAAIWTFE----FANNLDMVKN-------FDSGASLFEILLDSLCKQGRVKAASE 93
+ G+V + + ++E F + +D++ N + ++ LL+ L + ++K
Sbjct: 16 KLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLES 75
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + + P V +N L+ R+ V+ A EM V P+ T+ TL++G
Sbjct: 76 VYSEMGA--RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG 133
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+ ++ A+R+ M + G + N +I+G + GR E+ G +++ + P
Sbjct: 134 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 193
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+TY + V G C+ + A K++ +M+ G P TYN K G++E+A +
Sbjct: 194 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 253
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M++ G PD T++ L+ LC ++L+ A+ +++++ +G D+ T +LI+ LC++
Sbjct: 254 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV--PRSM---- 387
A FE+M G P +T+ L D G A L M S PRS
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 373
Query: 388 ELLDSRCK 395
++D CK
Sbjct: 374 TIIDGLCK 381
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + + A +L + +PD TF LI +E A+ + A
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDIT---TFNTLIAALCTGNRLEEAL---DLAR 288
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ VK F IL+++LCK G A F + K + P YN L++
Sbjct: 289 QV-TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK--NSGCTPDEVTYNTLIDNLC 345
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ A +M + +TY T+++G C+ R++ A + +M +GI NAI
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 405
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL + + ++ ++ + + P +TY S++ YCK GD++ A+ IL+ M
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K G+ + A+ + R M G P Y+ +L+ L + + +
Sbjct: 466 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 525
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M+ +G +P + +F+
Sbjct: 526 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 585
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 586 LAEGLLNLGM 595
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 14/349 (4%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+K T +LI Y + G VE A+ + ++ F+ + ++ LC+ V
Sbjct: 158 TKVTVNVLINGYCKLGRVEDALGYIQ----QEIADGFEPDQITYNTFVNGLCQNDHVG-- 211
Query: 92 SEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
H K +D + P V YNI++N ++ +++A+ +M P++ T+
Sbjct: 212 ----HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ C R++ A+ L +++ +G+ P+ +N +I+ L + G + E
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +L+ C G L A +LK M S G S TYN K ++E+
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 387
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A ++ +M G + + +T++ L+ LCK+ K+D A ++ +M G + T ++
Sbjct: 388 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 447
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ +A+ E M G +T+ L + K G T +A K+
Sbjct: 448 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 496
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 88/243 (36%), Gaps = 53/243 (21%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K+ D A+ L+ I P+ + T+ ++ Y + G ++ A E
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNI---TYNSILTHYCKQGDIKKAADILETMT 466
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F+ + L++ LCK GR + A + R + PT + YN +L F
Sbjct: 467 ----ANGFEVDVVTYGTLINGLCKAGRTQVALKVL--RGMRIKGMRPTPKAYNPVLQSLF 520
Query: 121 RSKNVKDAER------------------------------------FWLEMRKENVTPNV 144
R N++DA F LEM + P
Sbjct: 521 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 580
Query: 145 VTYGTLVEGYCRLRRVD---RAIRLVKE---MRKEGIEP--NAIVYNTVIDGLVEAGRFE 196
++ L EG L D RAI ++ E +R+ + + D L GRF
Sbjct: 581 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 640
Query: 197 EVS 199
E++
Sbjct: 641 EIN 643
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
VYN LLN +K E + EM + P+VVT+ TL++ CR +V A+ +++EM
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ P+ + T++ G VE G E + R L T VT L+ GYCK G +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++ I+ GF P TYN F + V A+ + M++ G+ PD TY+I+
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK +L+ A + +M RGC D+ T LI LC + +EA + +G+
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
P TF L + K G LA +L
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRL 413
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 178/382 (46%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A + +A +L + PD + TF L++ + G +EAA+ A
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPD---ETTFTTLMQGFVEEGSIEAALRVK--AR 241
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L+M + +L++ CK GRV+ A Y ++E+ + P YN +NG
Sbjct: 242 MLEM--GCSATKVTVNVLINGYCKLGRVEDALGYI--QQEIADGFEPDQITYNTFVNGLC 297
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +V A + M +E P+V TY +V C+ +++ A ++ +M G P+
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I L R EE + + V P + T+ L+ CK GD A ++ + M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+ A++L + M +G +TY+ ++ LCK+ ++
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A +V +M +G + T LI LC+ K D+A MI GL P+ +T+ +
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSI 537
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ K+G A + M++
Sbjct: 538 LTHYCKQGDIKKAADILETMTA 559
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ +LC R++ A + R+ + +P V +NIL+N + + A R +
Sbjct: 357 TTFNTLIAALCTGNRLEEALDL--ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM+ TP+ VTY TL++ C L ++ +A+ L+K+M G + I YNT+IDGL +
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R EE + ++ + +T+ +L+ G CK ++ A ++ MIS G P+ TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITY 534
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++ K G ++ A ++ M +G+ D +TY L+ LCK + +A++V + M+
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+G ++ L R +A + F +M G P LT+K
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 159/342 (46%), Gaps = 8/342 (2%)
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N L + + ++ LL+ L + ++K + + + P V +N L+
Sbjct: 134 NQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA--RGIKPDVVTFNTLMKAL 191
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R+ V+ A EM V P+ T+ TL++G+ ++ A+R+ M + G
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ N +I+G + GR E+ G +++ + P +TY + V G C+ + A K++ +
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G P TYN K G++E+A + +M++ G PD T++ L+ LC ++
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A+ +++++ +G D+ T +LI+ LC++ A FE+M G P +T+
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 360 LNDEFKKRGMTALAQKLCNVMSSV--PRSM----ELLDSRCK 395
L D G A L M S PRS ++D CK
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 168/370 (45%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + + A +L + +PD TF LI +E A+ + A
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDIT---TFNTLIAALCTGNRLEEAL---DLAR 380
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ VK F IL+++LCK G A F + K + P YN L++
Sbjct: 381 QV-TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK--NSGCTPDEVTYNTLIDNLC 437
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ A +M + +TY T+++G C+ R++ A + +M +GI NAI
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL + + ++ G++ + + P +TY S++ YCK GD++ A+ IL+ M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K G+ + A+ + R M G P Y+ +L+ L + + +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M+ +G +P + +F+
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 678 LAEGLLNLGM 687
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 14/353 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+K T +LI Y + G VE A+ + ++ F+ + ++ LC+ V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQ----QEIADGFEPDQITYNTFVNGLCQNDHVG-- 303
Query: 92 SEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
H K +D + P V YNI++N ++ +++A+ +M P++ T+
Sbjct: 304 ----HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ C R++ A+ L +++ +G+ P+ +N +I+ L + G + E
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +L+ C G L A +LK M S G S TYN K ++E+
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A ++ +M G + + +T++ L+ LCK+ K+D A + +M G + T ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILT 539
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C+ +A+ E M G +T+ L + K G T +A K+ M
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 72/298 (24%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE--------------------- 173
+ +++ P Y ++ + +D LV EMR+E
Sbjct: 65 LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124
Query: 174 ----------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
GI+ + +VYN +++ LVE + + + + P +VT+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY------------------------- 252
+L+K C+A + A +L+ M SRG P TT+
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 253 ----------NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
N + K G+VEDA+ ++ I G+ PD++TY+ + LC+ D +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A++V M G D D+ T ++++ LC+ + +EA M+ RG +P TF L
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 88/243 (36%), Gaps = 53/243 (21%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K+ D A+ L+ I P+ + T+ ++ Y + G ++ A E
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNI---TYNSILTHYCKQGDIKKAADILETMT 558
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F+ + L++ LCK GR + A + R + PT + YN +L F
Sbjct: 559 ----ANGFEVDVVTYGTLINGLCKAGRTQVALKVL--RGMRIKGMRPTPKAYNPVLQSLF 612
Query: 121 RSKNVKDAER------------------------------------FWLEMRKENVTPNV 144
R N++DA F LEM + P
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672
Query: 145 VTYGTLVEGYCRLRRVD---RAIRLVKE---MRKEGIEP--NAIVYNTVIDGLVEAGRFE 196
++ L EG L D RAI ++ E +R+ + + D L GRF
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 732
Query: 197 EVS 199
E++
Sbjct: 733 EIN 735
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 41/366 (11%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F S T L+ +A V+ + F+ + + + LF ++++ C GRV
Sbjct: 159 FPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPD----VYLFSTMVNAFCTGGRVD 214
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E F K +++ AP V YN +++G ++ + +A +F +M KE V P++VTYG
Sbjct: 215 DAIELFRKMEKV--GVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGV 272
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L+ G +L R D A ++KEM G PN +VYNT+IDG G + + +
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS--------------------------- 242
P VT SL++GYCK+ +E A +L+ M++
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL 392
Query: 243 --------RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
R F P+ + GK +A+ L+ +++E G+ + +T + L+ L
Sbjct: 393 LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGL 452
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C+ + A ++ KEM RG +D + LI C+ K +E E+M+RRG+ P
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM 512
Query: 355 LTFKRL 360
T+ L
Sbjct: 513 YTYNML 518
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 2/252 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +LL LC G+++ A +H+ K+ P Y I+++G+ ++ V++ E+ + E
Sbjct: 515 YNMLLHGLCNMGKIEEAGGLWHECKK--NGNFPDAYTYGIMIDGYCKANRVEEGEKLFQE 572
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N V YGTL+ YC + A RL +MR GI + Y+++I GL G
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + +++ P +V YT+L+ GYCK G + IL+ M P+ TY
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G ++ A L +M + G PD +TY+ L CKE K++ A++V M G
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752
Query: 315 CDIDLDTSTMLI 326
+D T T LI
Sbjct: 753 ISLDDITYTTLI 764
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 193/424 (45%), Gaps = 46/424 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI-WTFEFA 59
+I+ K+ + + A LL + + G V +++ TF +I R ++A+ + E
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEMLTGGGV---INQGTFTSVIHRLCLKCRFDSALLFIMEM- 398
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+++NF L +L+ LC+ G+ A E +++ L++ +A N L++G
Sbjct: 399 ----LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL--LEKGFAANTVTSNALIHGL 452
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + ++A + EM + + + ++Y TL+ C+ +V+ +L +EM + GI+P+
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM 512
Query: 180 IVYNTVIDGLVEAGRFEEVSGM-----------------------------------MER 204
YN ++ GL G+ EE G+ +
Sbjct: 513 YTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQE 572
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ + V Y +L++ YC+ G++ A ++ M SRG + TY+ S G
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V+ A L +M + G +P+ + Y L+ CK ++ + +EM + T T+
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
+I+ C++ A+ +M ++G+VP +T+ L + F K G A K+C++MS+
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752
Query: 385 RSME 388
S++
Sbjct: 753 ISLD 756
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 165/374 (44%), Gaps = 37/374 (9%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ++ + G V+ AI F + + N + + ++ LCK GR+ A ++
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVT----YNNIIHGLCKNGRLDEAFQFK 255
Query: 96 HKR--------------------------------KEL-DQSWAPTVRVYNILLNGWFRS 122
K KE+ D+ +AP VYN L++G+ R
Sbjct: 256 EKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRI 315
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
N+ A + +M ++PN VT +L++GYC+ +++ A L++EM G N +
Sbjct: 316 GNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTF 375
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+VI L RF+ + L+ P T LV G C+ G A ++ ++
Sbjct: 376 TSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLE 435
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+GF + T N + G E+A L ++M+E G D ++Y+ L+ CKE K++
Sbjct: 436 KGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEE 495
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
++ +EM RG D+ T ML+H LC M K +EA + + + G P T+ + D
Sbjct: 496 GFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMID 555
Query: 363 EFKKRGMTALAQKL 376
+ K +KL
Sbjct: 556 GYCKANRVEEGEKL 569
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL SL K VK + + F P V +++ ++N + V DA + +M K
Sbjct: 168 LLSSLVKANEVKMSYQVFDIMCHC--GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK 225
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
V PNVVTY ++ G C+ R+D A + ++M KE ++P+ + Y +I+GLV+ RF+E
Sbjct: 226 VGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDE 285
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ +++ P V Y +L+ GYC+ G++ A +I MIS G P+ T N +
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K ++E A +L +M+ G ++ T+ ++ LC + + D A+ EM R
Sbjct: 346 GYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKP 405
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T+L+ LC+ K EA + ++ +G + +T L + G A KL
Sbjct: 406 NDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL 464
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+ + CK+G+V+ E F ++E+ + P + YN+LL+G +++A W
Sbjct: 480 YNTLILACCKEGKVE---EGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWH 536
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E +K P+ TYG +++GYC+ RV+ +L +EM IE NA+VY T+I E G
Sbjct: 537 ECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENG 596
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E + + T TY+SL+ G G ++ A+++L M G P+ Y
Sbjct: 597 NMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYT 656
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ K G++ ++ ++M + P+++TY I++ CK + A ++ EM +
Sbjct: 657 ALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK 716
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
G D T L + C+ K +EA + M G+ +T+ L D + K
Sbjct: 717 GIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 169/389 (43%), Gaps = 27/389 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + FD A C+L + P+ V +T LI Y R G + A+ +
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNT---LIDGYCRIGNISTALQIRD--- 326
Query: 61 NLDMVKNFDSGASLF-EILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNIL 115
DM+ N S S+ L+ CK +++ A E ++Q +V ++ +
Sbjct: 327 --DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV-IHRLC 383
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L F S A F +EM N PN LV G C+ + AI L + ++G
Sbjct: 384 LKCRFDS-----ALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF 438
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
N + N +I GL EAG EE + M+ER LV + ++Y +L+ CK G +E
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDS----ISYNTLILACCKEGKVE 494
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
K+ + M+ RG P TYN GK+E+A L+ + ++G PD TY I++
Sbjct: 495 EGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMI 554
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CK ++++ ++ +EM + + LI C EA +DM RG+
Sbjct: 555 DGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIP 614
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T+ L G+ A +L + M
Sbjct: 615 QTSATYSSLIHGLSNIGLVDSANQLLDEM 643
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 38/303 (12%)
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGW---FRSKNVKDAERFWLEMRKENVTPNVV 145
+ A +FH E A V V ++L++ + F+ + + + + P++
Sbjct: 104 RTAFNFFHFASETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLK 163
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T L+ + V + ++ M G+ P+ +++T+++ GR ++ + +
Sbjct: 164 TCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKM 223
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASK------------------------------ 235
P +VTY +++ G CK G L+ A +
Sbjct: 224 EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERF 283
Query: 236 -----ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
ILK M RG+ P+ YN + + G + A+ + MI +G +P+ +T + L
Sbjct: 284 DEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSL 343
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
++ CK ++++ A + +EM G I+ T T +IH LC +FD A +M+ R
Sbjct: 344 IQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNF 403
Query: 351 VPH 353
P+
Sbjct: 404 KPN 406
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 42/322 (13%)
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVK---------DAERFWLEMRKENVTP---- 142
H+ K +QS +V ++IL N F S K + ++ +L + NV P
Sbjct: 50 HQLKAPNQSLINSV--FSILSNPSFDSSKSKQLLLHLSPHEFDQCFLAIGSNNVNPRTAF 107
Query: 143 NVVTYG--TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
N + TL E + VD I VY+T L FE S
Sbjct: 108 NFFHFASETLFEPAVAVTVVDLLIH---------------VYSTQFKHLGFGVVFELFSL 152
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ + L P++ T L+ KA +++ + ++ +M G P ++ F
Sbjct: 153 LANKGLF----PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
G+V+DA+ L+RKM + G P+ +TY+ ++ LCK +LD A Q ++M+ L
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T +LI+ L ++ +FDEA+ ++M RG P+ + + L D + + G + A ++ + M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328
Query: 381 SS---VPRSM---ELLDSRCKD 396
S P S+ L+ CK
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKS 350
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 160/344 (46%), Gaps = 37/344 (10%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F+ F LL C R++ A F + + + P V Y L++ +++++
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQ--IVGMGFRPNVVTYTTLIHCLCKNRHLNH 205
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + +M + PNVVTY +LV G C + R A L+++M K GI+PN I + +ID
Sbjct: 206 AVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALID 265
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
V+ G+ E + + + P + TYT+L+ G C G L+ A ++ +M S G+ P
Sbjct: 266 AFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-------YT------------------- 281
+ TY F K +VED ++ +M + G YT
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385
Query: 282 ---------PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
PD TY++LL LC ++ A+ + K M+ R DI++ T T++I +C++
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K ++A F + +G+ P+ +T+ + F +RG A L
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADAL 489
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 166/368 (45%), Gaps = 8/368 (2%)
Query: 21 KIGGHEVPDFVSKDTFVILIRRYARA-GMVEAAIWTFEFANNLDMVKNFDSGASL----- 74
+I H +S F IR ++ ++ + +F LD+ L
Sbjct: 25 QISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVD 84
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL + K R F + + L S P + NI++N RS A F +
Sbjct: 85 FTRLLSVIAKMKRFDVVISLFEQMQILGIS--PVLYTCNIVMNCVCRSSQPCRASCFLGK 142
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K P++VT+ +L+ G+C R++ A+ L ++ G PN + Y T+I L +
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRH 202
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + P +VTY SLV G C+ G A+ +L+ M+ RG P+ T+
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+ +A LY+ MI+ PD TY L+ LC +LD A Q+ M+ G
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNG 322
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T T LIH C+ + ++ + F +M ++GLV + +T+ L + G +AQ
Sbjct: 323 YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQ 382
Query: 375 KLCNVMSS 382
++ N M S
Sbjct: 383 EVFNQMGS 390
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 17/319 (5%)
Query: 65 VKNFDSGASLFE---------------ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTV 109
+K FD SLFE I+++ +C+ + AS + K +L + P +
Sbjct: 95 MKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKL--GFEPDL 152
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
+ LL+G+ ++DA + ++ PNVVTY TL+ C+ R ++ A+ + +
Sbjct: 153 VTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQ 212
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M GI PN + YN+++ GL E GR+ + + ++ + P ++T+T+L+ + K G
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGK 272
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A ++ K+MI P TY +G++++A ++ M +GY P+ +TY
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ CK +++ ++ EM +G + T T+LI C + + D A F M R
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 350 LVPHYLTFKRLNDEFKKRG 368
P T+ L D G
Sbjct: 393 APPDIRTYNVLLDGLCYNG 411
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 12 DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
D+AW LL D + P+ + TF LI + + G + A ++ + + + +
Sbjct: 240 DAAW-LLRDMMKRGIQPNVI---TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFT- 294
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
+ L++ LC GR+ A + F+ + + P Y L++G+ +SK V+D +
Sbjct: 295 ---YTALINGLCTYGRLDEARQMFYLMES--NGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ EM ++ + N +TY L++GYC + R D A + +M P+ YN ++DGL
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G E+ + + E +VTYT +++G CK G +E A + + S+G P+ T
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVIT 469
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
Y F + G + +A L++KM E G+ P+
Sbjct: 470 YTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 10/283 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC+ GR A+ R + + P V + L++ + + + +A+ +
Sbjct: 225 YNSLVSGLCEIGRWSDAAWLL--RDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKV 282
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +V P+V TY L+ G C R+D A ++ M G PN + Y T+I G ++ R
Sbjct: 283 MIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKR 342
Query: 195 FEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
E+ + M ++ LV +TYT L++GYC G + A ++ M SR P
Sbjct: 343 VEDGTKIFYEMSQKGLVANT----ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIR 398
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN G VE A+ +++ M + + +TY I+++ +CK K++ A + +
Sbjct: 399 TYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSL 458
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+G ++ T T +I CR EA A F+ M G +P+
Sbjct: 459 FSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI+ Y G + A F + + + +LLD LC G V+ A
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGS----RRAPPDIRTYNVLLDGLCYNGYVEKALMI 419
Query: 95 FH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F +++E+D + + Y I++ G + V+DA + + + + PNV+TY T++
Sbjct: 420 FKYMRKREMDIN----IVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 475
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
G+CR + A L K+M+++G PN V
Sbjct: 476 GFCRRGFIHEADALFKKMKEDGFLPNESV 504
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 27/361 (7%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS F LI AR G + A+ F +V + ++ IL+D C+ G
Sbjct: 394 LPDLVS---FSSLIGVLARNGHLYQALMHFREMERSGIVPD----NVIYTILIDGFCRNG 446
Query: 87 RVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
A S+ R E L + V YN LNG + K DA+ + EM + + P+
Sbjct: 447 ---ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ TL+ GYC+ +D+A+ L + M + ++P+ + YNT+IDG +AG + +
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ + P ++Y +++ G+C +G L A + M+ +G P+ T N + + + G +
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A KMI +G PD +Y+ L+ KE L+ A + EM+ RG ++ T ++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK----------------RLNDEFKKRGM 369
++ C K EA MI G+ P T+ R +DE +RG+
Sbjct: 684 LNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Query: 370 T 370
Sbjct: 744 V 744
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 2/291 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL L + G V A E + + + V NI++N + + ++ F +M
Sbjct: 228 LLGGLVRTGWVDLAWEIYGE--VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ V ++VTY TL+ YCR V+ A +L+ G+EP + YN ++ GL + G+++
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++ L P TY +L+ C+ ++ A +I M RG LP +++
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
++ G + A+ +R+M SG PD + Y IL+ C+ L A+++ EM RGC +
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T ++ LC+ F +A F +M+ RG+VP + TF L + K G
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG 516
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 175/415 (42%), Gaps = 44/415 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K ++F++ L D G D V+ +T LI Y R G+VE A F+ N
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT---LINAYCREGLVEEA---FQLLN 316
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + G + +L LCK G+ A + + +L P YN LL
Sbjct: 317 SFS-SRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL--GLTPNAATYNTLLVEIC 373
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R N+ +A+ + EM + V P++V++ +L+ R + +A+ +EM + GI P+ +
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL---------------------------------V 207
+Y +IDG G + M + L +
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 208 CEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E G P T+T+L++GYCK G+++ A + + M+ P TYN F K G++
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A L+ MI PD ++Y +L C L A+ + +M +G +L T L
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I CR +A MI G++P ++ L D + K A L N M
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 180/380 (47%), Gaps = 11/380 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K ++D A +L++ + P+ + +T ++ I R R ++EA F+ + +
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICR--RDNILEAQ-EIFDEMSRRGV 393
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSK 123
+ + S +SL +L + G + A +F +E+++S P +Y IL++G+ R+
Sbjct: 394 LPDLVSFSSLIGVL----ARNGHLYQALMHF---REMERSGIVPDNVIYTILIDGFCRNG 446
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ DA + EM +VVTY T + G C+ + A L EM + G+ P+ +
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFT 506
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T+I G + G ++ + E + P VTY +L+ G+CKAG++ A ++ MI +
Sbjct: 507 TLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+P +Y F G + +A+NL +M+E G P+ +T + L+K C+ + A
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ +M G D + LI + ++A +M +RGL + +T+ + +
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Query: 364 FKKRGMTALAQKLCNVMSSV 383
F G A+++ M +
Sbjct: 687 FCAEGKMQEAEQVLRKMIEI 706
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 134/266 (50%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+Y++L+ + ++K +++ + +R++ V+ ++ L+ G R VD A + E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ GIE N N +++ L + +FE V + +VTY +L+ YC+ G +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++L SRG P TYN K GK + A ++ +M++ G TP+ TY+ L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L +C+ D + A ++ EM RG DL + + LI +L R +A F +M R G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
VP + + L D F + G + A K+
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKM 454
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 15/282 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K K F A L + + VPDF TF LIR Y + G ++ A+ FE M
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFY---TFTTLIRGYCKDGNMDKALNLFE-----AM 528
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFR 121
V+ N + L+D CK G + A E + RK++ P Y +LNG+
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI----IPDHISYGTVLNGFCS 584
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S + +A +M ++ + PN+VT TL++GYCR + +A + +M GI P++
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YNT+IDG ++ E+ ++ ++TY ++ G+C G ++ A ++L+ MI
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
G P TY+ +++A + +M++ G PD
Sbjct: 705 EIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS---LVKGYCKAGDLEGASK 235
++Y+ ++ V+A + E S E F + V+ + L+ G + G ++ A +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGS---EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
I ++ G + T N K K E+ M M G D +TY+ L+ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+E ++ A Q+ RG + L T +++ LC++ K+D A +M++ GL P+
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMS 381
T+ L E +R AQ++ + MS
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMS 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
G + Y LV+ Y +A L S+ +++ +G S N + G V+ A
Sbjct: 184 GSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+Y +++ G + T +I++ LCK+ K + + +M+ +G D+ T LI+ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
R +EA RG+ P LT+ +
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 235 KILKMMISRGFLPSPT--TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K+++ +IS F Y+ R + + K+ + ++ + G + + LL
Sbjct: 171 KVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLG 230
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L + +DLA ++ E+ G ++++ T ++++ LC+ KF+ DM +G+
Sbjct: 231 GLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFA 290
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
+T+ L + + + G+ A +L N SS R ME
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSS--RGME 324
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 175/368 (47%), Gaps = 12/368 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ VLA+A A L + VP + TF + R R G A+
Sbjct: 145 VLSVLARADCHADALALYRRMVHRDRVPP--TTFTFGVAARALCRLGRANEALALLRGMA 202
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V + A L++ ++ +LC QG V A+ ++ L A V ++ ++ G
Sbjct: 203 RHGCVPD----AVLYQTVIHALCDQGGVTEAATLLNEM--LLMGCAADVNTFDDVVRGMC 256
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V++A R M + P V+TYG L++G CR+R+ D A + M E N +
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVV 312
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++NTVI G + G+ E + + E + P TY+ L+ G CK G + A ++L+ M
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+GF P+ TY F K G +D L +M G T + Y+ ++ LCK+ ++
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A+ + +EM+ +GC+ D+ + +I+ LC + +EA FE+++ G+V + +T+ +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 361 NDEFKKRG 368
+ G
Sbjct: 493 IHALLRDG 500
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+K A + IL+ LCK GR+ +A + ++ + +AP V Y I+L+ + ++
Sbjct: 339 LKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK--KGFAPNVVTYTIVLHSFCKNGM 396
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
D EM + +T N Y ++ C+ R+D A+ L++EMR +G P+ YNT
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I L + EE M E L +TY +++ + G + A ++ K MI G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+YN + K G V+ ++ L +M E G P+ ++Y+IL+ LCKE ++ A+
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++SK+M +G D+ T LI+ LC+M A E + + P +T+ L
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 632
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 10/305 (3%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M K G + LL LC+ + A + EL+ V ++N ++ G
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN------VVLFNTVIGGCLAEG 325
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +A + M + P+ TY L+ G C+L R+ A+RL++EM K+G PN + Y
Sbjct: 326 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYT 385
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT--YTSLVKGYCKAGDLEGASKILKMMI 241
V+ + G +++ ++E + G T+ + Y ++ CK G ++ A +++ M
Sbjct: 386 IVLHSFCKNGMWDDTRALLEE--MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S+G P +YN + ++E+A +++ ++E G + +TY+ ++ L ++ +
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A++++KEM GC +D+ + LI +C+ D + E+M +G+ P+ +++ L
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563
Query: 362 DEFKK 366
E K
Sbjct: 564 SELCK 568
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 149/303 (49%), Gaps = 2/303 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF ++ +G++ A+E + + P Y+IL++G + + A R
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGL--KGCQPDAHTYSILMHGLCKLGRISSAVRLLR 370
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K+ PNVVTY ++ +C+ D L++EM +G+ N+ YN +I L + G
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E G+++ P + +Y +++ C +E A + + ++ G + + TYN
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ G+ +DA+ L ++MI G + D ++Y+ L+K +CK+ +D ++ + +EM +
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + + +LI LC+ + +A + M+ +GL P +T+ L + K G A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610
Query: 374 QKL 376
L
Sbjct: 611 LNL 613
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 6/269 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I++ + + GM + E + K + + ++ +LCK GR+ A
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMS----AKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + Q P + YN ++ ++ +++AE + + +E V N +TY T++
Sbjct: 439 IQEMRS--QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R R A+RL KEM G + + YN +I + + G + ++E P
Sbjct: 497 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 556
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y L+ CK + A ++ K M+++G P TYN K G + A+NL K
Sbjct: 557 VSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK 616
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLA 303
+ PD +TY+IL+ CK LD A
Sbjct: 617 LHNENVHPDIITYNILISWHCKVRLLDDA 645
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 111/289 (38%), Gaps = 68/289 (23%)
Query: 162 RAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-------------- 206
RA+ L+ ++ R+ G++P+ YN V+ L A + + R +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 207 ----VCEPG------------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+C G P V Y +++ C G + A+ +L M+ G
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK-------- 296
T++ R G+V +A L +M+ G P +TY LL+ LC+
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 297 -----------------------EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
E KL A ++ + M +GC D T ++L+H LC++
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ A +M ++G P+ +T+ + F K GM + L MS+
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 186/359 (51%), Gaps = 26/359 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKAGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++ ++GR + YF+K +++ PT +N+L+ G+F
Sbjct: 108 ELGVERTIKSYDALFKVI----SRRGRYMMSKRYFNKM--VNEGIEPTRHTFNVLIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ +TP+V+TY T++ GY R+++++ A + EM++ I+P +
Sbjct: 162 LSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G R ++ ++E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 282 VDKYV--APTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIEYYCKA 339
Query: 298 DKLDLAIQ-----VSKEMKCR---GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
+ D A++ + K++ R ++L LI LC + +A+ E ++R+
Sbjct: 340 GQYDKAVKLLDKLIEKDIILRPQSTLHMELSAYNPLIEYLCN----NGQTAKAETLVRQ 394
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R + N + ++E R +++ A ++
Sbjct: 15 VYNVL----HGAKNAEHALQFFRWVE-RSNLLEHNREIHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ + M++ G P+ T+N F GKVE A + M TPD +TY+
Sbjct: 130 RYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R D + T T LI + + D+A E+M
Sbjct: 190 TMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGL 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S M L+ S+CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCK 303
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 22/261 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ YA V+ A+ E L + N A + LL LC ++ A
Sbjct: 222 TYTTLIKGYASVDRVDDALRLVEEMKGLGIKPN----AITYSTLLPGLCNAEKMSEARSI 277
Query: 95 FHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ +D+ APT ++ L++ ++ N+ A M + +V YG L+E
Sbjct: 278 L--KEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIEY 335
Query: 154 YCRLRRVDRAIRLVKEMRKEGI--EPNAIV------YNTVIDGLVEAGRFEEVSGMMERF 205
YC+ + D+A++L+ ++ ++ I P + + YN +I+ L G+ + ++ +
Sbjct: 336 YCKAGQYDKAVKLLDKLIEKDIILRPQSTLHMELSAYNPLIEYLCNNGQTAKAETLVRQL 395
Query: 206 L---VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ V +P + +L++G+ + G + A ++LK+M+ R + Y+ + + K
Sbjct: 396 MKLGVQDP----TSLNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKK 451
Query: 263 GKVEDAMNLYRKMIESGYTPD 283
+ DA MIE+ + PD
Sbjct: 452 NEPADAKAALDSMIENDHLPD 472
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKQGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKV 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKVGQYDKAVKLLD 350
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E ++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C++ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN I+ L G+ + ++ + + PT + +L++G + G
Sbjct: 362 QSTLHLEPSA--YNPXIEYLCNNGQAXKAETLVRQLXKLGVQDPTALN--TLIRGXSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPD 472
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D CK V AA F + + Q P + YN L+NG + + +A W +
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQR--QGLKPNIVTYNSLINGLSNNGKLDEAIALWDK 333
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN+VT+ L+ G+C+ + + A +L ++ ++ + PNAI +NT+ID +AG
Sbjct: 334 MVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGM 393
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE + L P + TY L+ G C+ ++ A K+L M + TYN
Sbjct: 394 MEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNI 453
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K G+ A L +M+ G P+ +TY+ L+ C E L A++V +M+ G
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T +LI C+ K ++A+ +M+ +GL P+ T+ + E ++G
Sbjct: 514 KRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 157/307 (51%), Gaps = 5/307 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD---AE 129
+ F I ++ LCK G++ A + K ++P + YN L++G + + A+
Sbjct: 201 TTFNIFINGLCKAGKLNKAEDVIEDIKAW--GFSPNIVTYNTLIDGHCKKGSAGKMYRAD 258
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
EM + PN +T+ TL++G+C+ V A +EM+++G++PN + YN++I+GL
Sbjct: 259 AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ +E + ++ + P +VT+ +L+ G+CK ++ A K+ + + +P+
Sbjct: 319 SNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
T+N F K G +E+ L+ M++ G P+ TY+ L+ LC+ + A ++ E
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ D+ T +LI C+ + +A +M+ G+ P+++T+ L D + G
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498
Query: 370 TALAQKL 376
A K+
Sbjct: 499 LKAALKV 505
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 9/263 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V T+ LI + G ++ AI ++ L + N + F L++ CK+
Sbjct: 306 PNIV---TYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVT----FNALINGFCKKKM 358
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+K A + F E Q P +N +++ + ++ +++ M E + PNV TY
Sbjct: 359 IKEARKLFDDIAE--QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTY 416
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G CR + V A +L+ EM ++ + + YN +I G + G + ++ L
Sbjct: 417 NCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLN 476
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +L+ GYC G+L+ A K+ M G + TYN + F K GK+ED
Sbjct: 477 VGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLED 536
Query: 268 AMNLYRKMIESGYTPDRLTYHIL 290
A L +M+E G P+R TY ++
Sbjct: 537 ANRLLNEMLEKGLNPNRTTYDVV 559
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 152/316 (48%), Gaps = 5/316 (1%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
+ A + ++L+ + + +A E F R+ D + ++ N LL+ + + +
Sbjct: 128 ANALITDMLVLAYVTNLEIHSACEVF--RRVQDYGFKLSLNSCNPLLSALVKGNETGEMQ 185
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ EM K + PN+ T+ + G C+ ++++A ++++++ G PN + YNT+IDG
Sbjct: 186 YVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGH 245
Query: 190 VE---AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ AG+ +++ L + P +T+ +L+ G+CK ++ A + M +G
Sbjct: 246 CKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ TYN S GK+++A+ L+ KM+ G P+ +T++ L+ CK+ + A ++
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++ + + T +I C+ +E A M+ G+ P+ T+ L +
Sbjct: 366 FDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCR 425
Query: 367 RGMTALAQKLCNVMSS 382
A+KL N M +
Sbjct: 426 NQNVRAAKKLLNEMEN 441
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL +L K G +Y +K + + P + +NI +NG ++ + AE +++
Sbjct: 171 LLSALVK-GNETGEMQYVYKEM-IKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228
Query: 138 ENVTPNVVTYGTLVEGYCR---LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+PN+VTY TL++G+C+ ++ RA ++KEM I PN I +NT+IDG +
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E P +VTY SL+ G G L+ A + M+ G P+ T+N
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K +++A L+ + E P+ +T++ ++ CK ++ + M G
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T LI LCR A +M L +T+ L + K G + A+
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAE 468
Query: 375 KLCNVMSSV 383
KL M +V
Sbjct: 469 KLLGEMLNV 477
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGR 87
F + T+ LI R V AA L+ ++N++ A + + IL+ CK G
Sbjct: 410 FPNVSTYNCLIAGLCRNQNVRAA------KKLLNEMENYELKADVVTYNILIGGWCKDGE 463
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A + + L+ P YN L++G+ N+K A + +M KE NVVTY
Sbjct: 464 PSKAEKLLGEM--LNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTY 521
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
L++G+C+ +++ A RL+ EM ++G+ PN Y+ V ++E G ++ G +
Sbjct: 522 NVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHL 576
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 183/388 (47%), Gaps = 20/388 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L A E D A LL + G P+ + + L+R Y R+G + FE +
Sbjct: 156 LIRGLCDAAELDGALELLGEMCGSGVHPNVI---VYSCLLRGYCRSGRWQDVSKVFEEMS 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + +F +D LCK+GR+ A + K + + P V YN+L+N
Sbjct: 213 RL----GVEPDVIMFTGFIDDLCKKGRIGKAVKV--KDIMVQRGLEPNVVTYNVLINCLC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG--IEPN 178
+ +V++A EM + V P+VVTY TL+ G + +D A+ L++EM + +EP+
Sbjct: 267 KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPD 326
Query: 179 AIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ +N+VI GL + GR + M ER +C +VTY L+ G+ + + A
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMC----NLVTYNYLIGGFLRVHKVNMAM 382
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++ +IS G P TY+ FSK +V+ A R M + G + Y LL L
Sbjct: 383 NLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAAL 442
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C+ ++ A+ + EM C +D + +++ C+ A +DM+ GL P
Sbjct: 443 CQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDA 501
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+T+ L + F K G A+++ M++
Sbjct: 502 VTYSILINMFAKLGDLEEAERVLKQMAA 529
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 163/347 (46%), Gaps = 12/347 (3%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR--VKAA 91
D +L RR A + EA + D V + I+L +LC++G +A
Sbjct: 46 DAAALLNRRLRAAPVTEACSLLSALPDVRDAVS--------YNIVLAALCRRGGDLRQAL 97
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
S +E + P Y +++ G S+ +A M+ V +VVTYGTL+
Sbjct: 98 SLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLI 157
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G C +D A+ L+ EM G+ PN IVY+ ++ G +GR+++VS + E
Sbjct: 158 RGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVE 217
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P ++ +T + CK G + A K+ +M+ RG P+ TYN K G V +A+ L
Sbjct: 218 PDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALAL 277
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM--LIHLL 329
+M + G PD +TY+ L+ L ++D A+ + +EM ++ D T +IH L
Sbjct: 278 RNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGL 337
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C++ + +A + E M RG + + +T+ L F + +A L
Sbjct: 338 CKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNL 384
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 5/245 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++ LCK GR++ A E + + YN L+ G+ R V A E
Sbjct: 330 FNSVIHGLCKIGRMRQAISVREMMAE--RGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSE 387
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + P+ TY L+ G+ +L VDRA ++ M + GI Y ++ L + G
Sbjct: 388 LISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGM 447
Query: 195 FEEVSGMM-ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E+ + E + C G V Y++++ G CK+GD++ A ++L+ M+ G P TY+
Sbjct: 448 MEQAMVLFNEMDMNC--GLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYS 505
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F+K G +E+A + ++M SG+ PD + L+K E +++ + + EM+ +
Sbjct: 506 ILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565
Query: 314 GCDID 318
ID
Sbjct: 566 NVAID 570
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 160/335 (47%), Gaps = 11/335 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS F LI AR G + A+ F +V + ++ IL+D C+ G
Sbjct: 394 LPDLVS---FSSLIGVLARNGHLYQALMHFREMERSGIVPD----NVIYTILIDGFCRNG 446
Query: 87 RVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
A S+ R E L + V YN LNG + K DA+ + EM + + P+
Sbjct: 447 ---ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T+ TL+ GYC+ +D+A+ L + M + ++P+ + YNT+IDG +AG + +
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ + P ++Y +++ G+C +G L A + M+ +G P+ T N + + + G +
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A KMI +G PD +Y+ L+ KE L+ A + EM+ RG ++ T ++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ C K EA MI G+ P T+ L
Sbjct: 684 LNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 175/415 (42%), Gaps = 44/415 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K ++F++ L D G D V+ +T LI Y R G+VE A F+ N
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT---LINAYCREGLVEEA---FQLLN 316
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + G + +L LCK G+ A + + +L P YN LL
Sbjct: 317 SFS-SRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL--GLTPNAATYNTLLVEIC 373
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R N+ +A+ + EM + V P++V++ +L+ R + +A+ +EM + GI P+ +
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL---------------------------------V 207
+Y +IDG G + M + L +
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 208 CEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E G P T+T+L++GYCK G+++ A + + M+ P TYN F K G++
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A L+ MI PD ++Y +L C L A+ + +M +G +L T L
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I CR +A MI G++P ++ L D + K A L N M
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 2/303 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL L + G V A E + + + V NI++N + + ++ F +M
Sbjct: 228 LLGGLVRTGWVDLAWEIYGE--VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ V ++VTY TL+ YCR V+ A +L+ G+EP + YN ++ GL + G+++
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++ L P TY +L+ C+ ++ A +I M RG LP +++
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
++ G + A+ +R+M SG PD + Y IL+ C+ L A+++ EM RGC +
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ T ++ LC+ F +A F +M+ RG+VP + TF L + K G A L
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 378 NVM 380
M
Sbjct: 526 EAM 528
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 180/380 (47%), Gaps = 11/380 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K ++D A +L++ + P+ + +T ++ I R R ++EA F+ + +
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICR--RDNILEAQ-EIFDEMSRRGV 393
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSK 123
+ + S +SL +L + G + A +F +E+++S P +Y IL++G+ R+
Sbjct: 394 LPDLVSFSSLIGVL----ARNGHLYQALMHF---REMERSGIVPDNVIYTILIDGFCRNG 446
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ DA + EM +VVTY T + G C+ + A L EM + G+ P+ +
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFT 506
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T+I G + G ++ + E + P VTY +L+ G+CKAG++ A ++ MI +
Sbjct: 507 TLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+P +Y F G + +A+NL +M+E G P+ +T + L+K C+ + A
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ +M G D + LI + ++A +M +RGL + +T+ + +
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Query: 364 FKKRGMTALAQKLCNVMSSV 383
F G A+++ M +
Sbjct: 687 FCAEGKMQEAEQVLRKMIEI 706
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 134/266 (50%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+Y++L+ + ++K +++ + +R++ V+ ++ L+ G R VD A + E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ GIE N N +++ L + +FE V + +VTY +L+ YC+ G +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++L SRG P TYN K GK + A ++ +M++ G TP+ TY+ L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L +C+ D + A ++ EM RG DL + + LI +L R +A F +M R G+
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
VP + + L D F + G + A K+
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKM 454
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 23/286 (8%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K K F A L + + VPDF TF LIR Y + G ++ A+ FE M
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFY---TFTTLIRGYCKDGNMDKALNLFE-----AM 528
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFR 121
V+ N + L+D CK G + A E + RK++ P Y +LNG+
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI----IPDHISYGTVLNGFCS 584
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S + +A +M ++ + PN+VT TL++GYCR + +A + +M GI P++
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644
Query: 182 YNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
YNT+IDG ++ E+ ++ M +R L ++TY ++ G+C G ++ A ++L
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQF----NIITYNLILNGFCAEGKMQEAEQVL 700
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ MI G P TY+ +++A + +M++ G PD
Sbjct: 701 RKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS---LVKGYCKAGDLEGASK 235
++Y+ ++ V+A + E S E F + V+ + L+ G + G ++ A +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGS---EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
I ++ G + T N K K E+ M M G D +TY+ L+ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+E ++ A Q+ RG + L T +++ LC++ K+D A +M++ GL P+
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMS 381
T+ L E +R AQ++ + MS
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMS 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
G + Y LV+ Y +A L S+ +++ +G S N + G V+ A
Sbjct: 184 GSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+Y +++ G + T +I++ LCK+ K + + +M+ +G D+ T LI+ C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
R +EA RG+ P LT+ +
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 235 KILKMMISRGFLPSPT--TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K+++ +IS F Y+ R + + K+ + ++ + G + + LL
Sbjct: 171 KVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLG 230
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L + +DLA ++ E+ G ++++ T ++++ LC+ KF+ DM +G+
Sbjct: 231 GLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFA 290
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
+T+ L + + + G+ A +L N SS R ME
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSS--RGME 324
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
VYN LLN +K E + EM + P+VVT+ TL++ CR +V A+ +++EM
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ P+ + T++ G VE G E + R L T VT L+ GYCK G +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++ I+ GF P TYN F + V A+ + M++ G+ PD TY+I+
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK +L+ A + +M RGC D+ T LI LC + +EA + +G+
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
P TF L + K G LA +L
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRL 413
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ +LC R++ A + R+ + +P V +NIL+N + + A R +
Sbjct: 357 TTFNTLIAALCTGNRLEEALDL--ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM+ TP+ VTY TL++ C L ++ +A+ L+K+M G + I YNT+IDGL +
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R EE + ++ + +T+ +L+ G CK ++ A +++ MIS G P+ TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++ K G ++ A ++ M +G+ D +TY L+ LCK + +A++V + M+
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+G ++ L R +A + F +M G P LT+K
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 178/382 (46%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A + +A +L + PD + TF L++ + G +EAA+ A
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPD---ETTFTTLMQGFVEEGSIEAALRVK--AR 241
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L+M + +L++ CK GRV+ A Y ++E+ + P YN +NG
Sbjct: 242 MLEM--GCSATKVTVNVLINGYCKLGRVEDALGYI--QQEIADGFEPDQITYNTFVNGLC 297
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +V A + M +E P+V TY +V C+ +++ A ++ +M G P+
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I L R EE + + V P + T+ L+ CK GD A ++ + M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+ A++L + M +G +TY+ ++ LCK+ ++
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A +V +M +G + T LI LC+ K D+A MI GL P+ +T+ +
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 537
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ K+G A + M++
Sbjct: 538 LTHYCKQGDIKKAADILETMTA 559
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 159/342 (46%), Gaps = 8/342 (2%)
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N L + + ++ LL+ L + ++K + + + P V +N L+
Sbjct: 134 NQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA--RGIKPDVVTFNTLMKAL 191
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R+ V+ A EM V P+ T+ TL++G+ ++ A+R+ M + G
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ N +I+G + GR E+ G +++ + P +TY + V G C+ + A K++ +
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G P TYN K G++E+A + +M++ G PD T++ L+ LC ++
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A+ +++++ +G D+ T +LI+ LC++ A FE+M G P +T+
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 360 LNDEFKKRGMTALAQKLCNVMSSV--PRSM----ELLDSRCK 395
L D G A L M S PRS ++D CK
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + + A +L + +PD TF LI +E A+ + A
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDIT---TFNTLIAALCTGNRLEEAL---DLAR 380
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ VK F IL+++LCK G A F + K + P YN L++
Sbjct: 381 QV-TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK--NSGCTPDEVTYNTLIDNLC 437
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ A +M + +TY T+++G C+ R++ A + +M +GI NAI
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL + + ++ ++ + + P +TY S++ YCK GD++ A+ IL+ M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K G+ + A+ + R M G P Y+ +L+ L + + +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M+ +G +P + +F+
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 678 LAEGLLNLGM 687
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 158/353 (44%), Gaps = 14/353 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+K T +LI Y + G VE A+ + ++ F+ + ++ LC+ V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQ----QEIADGFEPDQITYNTFVNGLCQNDHVG-- 303
Query: 92 SEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
H K +D + P V YNI++N ++ +++A+ +M P++ T+
Sbjct: 304 ----HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ C R++ A+ L +++ +G+ P+ +N +I+ L + G + E
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +L+ C G L A +LK M S G S TYN K ++E+
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A ++ +M G + + +T++ L+ LCK+ K+D A ++ +M G + T ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C+ +A+ E M G +T+ L + K G T +A K+ M
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 72/298 (24%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE--------------------- 173
+ +++ P Y ++ + +D LV EMR+E
Sbjct: 65 LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124
Query: 174 ----------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
GI+ + +VYN +++ LVE + + + + P +VT+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY------------------------- 252
+L+K C+A + A +L+ M SRG P TT+
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 253 ----------NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
N + K G+VEDA+ ++ I G+ PD++TY+ + LC+ D +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A++V M G D D+ T ++++ LC+ + +EA M+ RG +P TF L
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 88/243 (36%), Gaps = 53/243 (21%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K+ D A+ L+ I P+ + T+ ++ Y + G ++ A E
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNI---TYNSILTHYCKQGDIKKAADILETMT 558
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F+ + L++ LCK GR + A + R + PT + YN +L F
Sbjct: 559 ----ANGFEVDVVTYGTLINGLCKAGRTQVALKVL--RGMRIKGMRPTPKAYNPVLQSLF 612
Query: 121 RSKNVKDAER------------------------------------FWLEMRKENVTPNV 144
R N++DA F LEM + P
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672
Query: 145 VTYGTLVEGYCRLRRVD---RAIRLVKE---MRKEGIEP--NAIVYNTVIDGLVEAGRFE 196
++ L EG L D RAI ++ E +R+ + + D L GRF
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 732
Query: 197 EVS 199
E++
Sbjct: 733 EIN 735
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ LCK+G + A K ++ V +Y +++ KNV DA + E
Sbjct: 207 YGTVVNGLCKRGDIDLALSLLKKMEK--GKIEADVVIYTTIIDALCNYKNVNDALNLFTE 264
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I PN + ++ +ID V+ G+
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P + TY+SL+ G+C L+ A + ++MIS+ P+ TYN
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +VE+ M L+R+M + G + +TY+ L++ L + D+A ++ K+M G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T ++L+ LC+ K ++A FE + + + P T+ + + K G
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 4/304 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ ++D+LC V A F E+D + P V YN L+ DA R
Sbjct: 241 IYTTIIDALCNYKNVNDALNLF---TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 297
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M + + PNVVT+ L++ + + ++ A +L EM K I+P+ Y+++I+G
Sbjct: 298 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 357
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R +E M E + + P +VTY +L+KG+CKA +E ++ + M RG + + TY
Sbjct: 358 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 417
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + + G + A +++KM+ G PD +TY ILL LCK KL+ A+ V + ++
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 477
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+ D+ T ++I +C+ K ++ F + +G+ P+ + + + F ++G+
Sbjct: 478 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 537
Query: 373 AQKL 376
A L
Sbjct: 538 ADAL 541
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 8/324 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C R+ A + ++ + P +N L++G F +A M
Sbjct: 140 LLNGYCHGKRISEAVALVDQMFVME--YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 197
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P++ TYGT+V G C+ +D A+ L+K+M K IE + ++Y T+ID L +
Sbjct: 198 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 257
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ P +VTY SL++ C G AS++L MI R P+ T++
Sbjct: 258 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K GK+ +A LY +MI+ PD TY L+ C D+LD A + + M + C
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 377
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T LI C+ + +E F +M +RGLV + +T+ L + G +AQK+
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437
Query: 378 NVMSS--VPRSM----ELLDSRCK 395
M S VP + LLD CK
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCK 461
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 181/386 (46%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + D A LL G D V T + + Y V A+ F +
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN---VNDALNLFTEMD 266
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + L+ LC GR AS +++ P V ++ L++ +
Sbjct: 267 N----KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKINPNVVTFSALIDAFV 320
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +AE+ + EM K ++ P++ TY +L+ G+C R+D A + + M + PN +
Sbjct: 321 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 380
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
YNT+I G +A R EE M +R LV G T VTY +L++G +AGD + A KI
Sbjct: 381 TYNTLIKGFCKAKRVEEGMELFREMSQRGLV---GNT-VTYNTLIQGLFQAGDCDMAQKI 436
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M+S G P TY+ K+GK+E A+ ++ + +S PD TY+I+++ +CK
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
K++ + + +G ++ T +I CR +EA A F +M G +P+ T
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L + G A + +L M S
Sbjct: 557 YNTLIRARLRDGDKAASAELIKEMRS 582
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 131/262 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ++NG + ++ A +M K + +VV Y T+++ C + V+ A+ L
Sbjct: 202 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 261
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM +GI PN + YN++I L GR+ + S ++ + + P +VT+++L+ + K
Sbjct: 262 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 321
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ MI R P TY+ F ++++A +++ MI P+ +T
Sbjct: 322 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 381
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ +++ +EM RG + T LI L + D A F+ M+
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D K G
Sbjct: 442 SDGVPPDIITYSILLDGLCKYG 463
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 159/330 (48%), Gaps = 11/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + A LL D I P+ V TF LI + + G + A ++
Sbjct: 280 LIRCLCNYGRWSDASRLLSDMIERKINPNVV---TFSALIDAFVKEGKLVEAEKLYD--- 333
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + D + L++ C R+ A F + + P V YN L+ G+
Sbjct: 334 --EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTLIKGF 389
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V++ + EM + + N VTY TL++G + D A ++ K+M +G+ P+
Sbjct: 390 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 449
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y+ ++DGL + G+ E+ + E + P + TY +++G CKAG +E +
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 509
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ Y F + G E+A L+R+M E G P+ TY+ L++ ++
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 569
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ KEM+ G D T +M+I++L
Sbjct: 570 KAASAELIKEMRSCGFVGDASTISMVINML 599
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 198/438 (45%), Gaps = 91/438 (20%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKA 339
Query: 263 GKVEDAMNLYRKMIE---------------SGYTP------------------------- 282
G+ + A+ L K+IE S Y P
Sbjct: 340 GQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLG 399
Query: 283 --DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
D + L++ +E D A ++ K M R D + +L+ + + +A A
Sbjct: 400 VQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKA 459
Query: 341 EFEDMIRRGLVPHYLTFK 358
+ MI +P F+
Sbjct: 460 ALDSMIENDHLPDSALFR 477
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGLLIENFCKAGQYDKAVKLLD 350
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 171/347 (49%), Gaps = 18/347 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD T I++ Y +AG VE A+ EF ++ + F+ A + L+D G
Sbjct: 63 VPDVF---TCAIMVNAYCKAGKVERAV---EFVREMEKL-GFELNAVSYNSLVDGYVSLG 115
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN-VTPNVV 145
++ A E + +L+ G+ + V++AE+ EM KE+ V +
Sbjct: 116 DIEGAKGVLKFMSE--KGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEY 173
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
YG L++GYC++ ++ AIR+ EM K G++ N V N++I+G + G+ E ER
Sbjct: 174 AYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHE----GERL 229
Query: 206 LVC----EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
L+C + P +Y +LV GYC+ G A + M+ +G P+ TYN + +
Sbjct: 230 LMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCR 289
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
FG +DA+ L+ M++ G TP+ + Y LL L K A+ + ++ RG + +
Sbjct: 290 FGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYA 349
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+I+ LC+M + D A F+ M G P +T++ L+D + K G
Sbjct: 350 FNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVG 396
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 162/383 (42%), Gaps = 41/383 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F +I + G ++ A TF+ L + + L D CK G V+ A +
Sbjct: 349 AFNTMINGLCKMGEMDGAKETFKRMEELGCKPD----GITYRTLSDGYCKVGNVEEA--F 402
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K K + P++ +YN L+ G F SK + EM ++PNVVTYG L+ G+
Sbjct: 403 KIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGW 462
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME----------- 203
C R+D+A EM +G PN I+ + ++ L GR +E + +++
Sbjct: 463 CDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDH 522
Query: 204 -----------RFLVC--------EPG-----PTMVTYTSLVKGYCKAGDLEGASKILKM 239
R L C E P V Y + G CK+G + A +
Sbjct: 523 RCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLG 582
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ F P TY FS G V +A NL +M+ G P+ TY+ LL LCK
Sbjct: 583 LSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGY 642
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD A ++ ++ +G ++ T +LI C+ EA M++ G+ P +T+
Sbjct: 643 LDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSS 702
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
L + F K+ A KL N M +
Sbjct: 703 LINGFCKQSDVEEAMKLLNEMKA 725
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 167/401 (41%), Gaps = 49/401 (12%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLD--MVKNFDSGASLFEILLDSLCKQGRVK 89
+K T +LI+ Y + VE A D +V + GA L+D CK G++
Sbjct: 135 NKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGA-----LIDGYCKVGKMG 189
Query: 90 AASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A R E L + V N L+NG+ ++ V + ER + MRK ++ P+ +Y
Sbjct: 190 DA---IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC 246
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
TLV+GYCR +A + +M ++GIEP + YNT++ GL G +++ + L
Sbjct: 247 TLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQR 306
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P V Y +L+ G K GD A + +++RG S +N K G+++ A
Sbjct: 307 GVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGA 366
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCK-------------------------------- 296
+++M E G PD +TY L CK
Sbjct: 367 KETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVG 426
Query: 297 ---EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
K+ I + EM RG ++ T LI C + D+A + + +MI +G P+
Sbjct: 427 LFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPN 486
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
+ ++ + G A L M +LD RC
Sbjct: 487 VIICSKIVSSLYRLGRIDEANMLLQKMVDFDL---VLDHRC 524
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 147/330 (44%), Gaps = 42/330 (12%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++L ++G VK A F + + P++R N LL+ + A + +MR
Sbjct: 1 MILKVYAEKGMVKNALHVFDNMGKYGRK--PSLRSCNSLLSNLVKRGESYSAVLVYDQMR 58
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ ++ P+V T +V YC+ +V+RA+ V+EM K G E NA+ YN+++DG V G E
Sbjct: 59 RLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIE 118
Query: 197 EVSGMMERFLVCEPGP--TMVTYTSLVKGYCKAGDLEGASKILKMMISR-GFLPSPTTYN 253
G+++ + E G VT T L+KGYCK +E A K+L+ M G + Y
Sbjct: 119 GAKGVLK--FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYG 176
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESG---------------------------------- 279
+ K GK+ DA+ + +M++ G
Sbjct: 177 ALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKL 236
Query: 280 -YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
PD +Y L+ C++ A V +M +G + + T L+ LCR + +A
Sbjct: 237 DLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDA 296
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ M++RG+ P+ + + L D K G
Sbjct: 297 LRLWHLMLQRGVTPNEVGYCTLLDGLFKMG 326
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 93/186 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P VYNI + G +S V DA RF+L + + TP+ TY TL+ G+ V+ A L
Sbjct: 555 PNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNL 614
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM +G+ PN YN +++GL ++G + + ++ + P +VTY L+ GYCK
Sbjct: 615 RDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCK 674
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G A + M+ G PS TY+ F K VE+AM L +M S T
Sbjct: 675 SGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIAT 734
Query: 287 YHILLK 292
+ L++
Sbjct: 735 FSKLVE 740
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ I + LCK G+V A +F S+ P Y L++G+ + V +A
Sbjct: 559 VYNIAMAGLCKSGKVNDARRFFLGLSH--GSFTPDNFTYCTLIHGFSAAGYVNEAFNLRD 616
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + PN+ TY L+ G C+ +DRA RL ++ +G+ PN + YN +IDG ++G
Sbjct: 617 EMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSG 676
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E + + L P+++TY+SL+ G+CK D+E A K+L M + + T++
Sbjct: 677 SPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFS 736
Query: 254 YFFRYFSKFGKVEDAMNLYRKM 275
+ G V+ L+ M
Sbjct: 737 KLVEGCIQHGDVKKMSKLHNMM 758
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 170/421 (40%), Gaps = 56/421 (13%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
MI L K E D A ++++G PD + T+ L Y + G VE A E
Sbjct: 353 MINGLCKMGEMDGAKETFKRMEELGCK--PDGI---TYRTLSDGYCKVGNVEEAFKIKEK 407
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLN 117
++ + + SL L S K S+ E+D + +P V Y L+
Sbjct: 408 MEKEEIFPSIEMYNSLIVGLFTS-------KKISKLIDLLAEMDTRGLSPNVVTYGALIA 460
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------- 170
GW + A + EM + PNV+ +V RL R+D A L+++M
Sbjct: 461 GWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVL 520
Query: 171 -------------------------RKEGIE---PNAIVYNTVIDGLVEAGRFEEVSGMM 202
+ I+ PN +VYN + GL ++G+ V+
Sbjct: 521 DHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGK---VNDAR 577
Query: 203 ERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
FL G P TY +L+ G+ AG + A + M+++G +P+ TTYN
Sbjct: 578 RFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGL 637
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K G ++ A L+ K+ G P+ +TY+IL+ CK A+ + +M G +
Sbjct: 638 CKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSI 697
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
T + LI+ C+ +EA +M + TF +L + + G KL N+
Sbjct: 698 ITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNM 757
Query: 380 M 380
M
Sbjct: 758 M 758
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%)
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++K Y + G ++ A + M G PS + N K G+ A+ +Y +M
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD T I++ CK K++ A++ +EM+ G +++ + L+ + + A
Sbjct: 62 IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ M +G++ + +T L + K+ A+K+
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKV 158
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 181/384 (47%), Gaps = 13/384 (3%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+++ K DSA + +L+ G +V F LI Y +G + AI F
Sbjct: 35 LIQIVVSRKGKDSASAVFATILETKGAQRSDIYV----FSGLITAYLESGFLRDAIECFR 90
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FD+ + E L+ K K ++ ++ L+ + ++ +NIL++
Sbjct: 91 LTRENKYWVPFDTCRKVLEHLM----KLKYFKLVWSFY--KEILECRYPASLYFFNILMD 144
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + ++ A+ + + K + P+VV++ TL+ GY +L +D RL M G++P
Sbjct: 145 RFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQP 204
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I+GL + + +E + + L P VT+T+L+ G+CK G L+ A +I
Sbjct: 205 DVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIY 264
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M+S+GF P TYN K G + A +L +M G PD++TY L+ CKE
Sbjct: 265 KQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A + K M +D + T LI LC+ + +A +M+ GL P T+
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTY 384
Query: 358 KRLNDEFKKRGMTALAQKLCNVMS 381
+ EF K G + KL M
Sbjct: 385 TIVMHEFCKNGDVKMGSKLLKEMQ 408
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+D CK+G ++ A F + W P+V +N L+NG+ + ++ + R
Sbjct: 138 FFNILMDRFCKEGEIRLAQSVFDGITK----WGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A +L EM G+ PN + + T+IDG +
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ + + ++ L P +TY +L+ G CK GDL A + M +G P T
Sbjct: 254 NGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MI+ D ++Y L+ LCKE + A ++ +EM
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T T+++H C+ S ++M R G VP +T
Sbjct: 374 SVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 174/373 (46%), Gaps = 15/373 (4%)
Query: 14 AWCLLLDKIGGHE-VPDFVSKDTFVILIRRYAR--AGMVEAAIWTFEFANNLDMVKNFDS 70
++C ++ + H+ +P+ +K I++ R + A V A I + A D+
Sbjct: 15 SYCTMIHFLCTHQMLPE--AKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIY----- 67
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+F L+ + + G ++ A E F +E ++ W P +L + + K K
Sbjct: 68 ---VFSGLITAYLESGFLRDAIECFRLTRE-NKYWVPFDTCRKVLEH-LMKLKYFKLVWS 122
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L++ +C+ + A + + K G+ P+ + +NT+++G +
Sbjct: 123 FYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYI 182
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G +E + P + TY+ L+ G CK ++ A K+ M+ RG +P+
Sbjct: 183 KLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGV 242
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K GK++ AM +Y++M+ G++PD +TY+ L+ LCK+ L A + EM
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEM 302
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G D T T LI C+ + A + MI+ + +++ L K G +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRS 362
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 363 VDAEKMLREMLSV 375
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 139/264 (52%), Gaps = 2/264 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR--LRRVDRAI 164
PTV+V+N ++ + RS DA + MR +++ P++V++ TL+ + A+
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ E+R+ G+ P+AI YNT+I + ++ + E + E P + TY ++V +
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
+ G + A + K ++ +GF P TYN F+K G VE + +++++G+ D
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY+ ++ + K +LDLA+ + EM+ GC D T T+L+ L +M + EA E+
Sbjct: 239 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 298
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRG 368
M GL P +TF L + K G
Sbjct: 299 MADAGLKPTLVTFSALICAYAKSG 322
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 183/424 (43%), Gaps = 36/424 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVI---------------LIRRYA 44
M+ V A++ FD A LL D + ++ PD VS +T + L+
Sbjct: 67 MMGVYARSGRFDDARQLL-DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVR 125
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCK------------QGRVKAAS 92
+AG+ AI + N D ++FE ++ S C+ GR A
Sbjct: 126 QAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQ 185
Query: 93 EYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E KEL ++ + P YN LL + + +V+ ER E+ K + +TY T++
Sbjct: 186 EAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMI 245
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
Y ++ R+D A+ L EMR G P+A+ Y ++D L + R E ++E
Sbjct: 246 HMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLK 305
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+VT+++L+ Y K+G + A + M+ G P Y F++ + M L
Sbjct: 306 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVL 365
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
YR MI+ GY PD Y +LL L K ++ D V ++M+ L S++LI C
Sbjct: 366 YRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC- 424
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN-VMSSVPRSMELL 390
+ ++ + +G P + + D ++K G L + VP S L+
Sbjct: 425 ---ISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLI 481
Query: 391 DSRC 394
S C
Sbjct: 482 -SEC 484
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 161/363 (44%), Gaps = 15/363 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I Y + G ++ A+ ++ + + A + +L+DSL K R+ A +
Sbjct: 240 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPD----AVTYTVLVDSLGKMDRISEAGKV 295
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ D PT+ ++ L+ + +S DAER + M + V P+ + Y +++ +
Sbjct: 296 LEEMA--DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVF 353
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF-LVCEPGPT 213
R + + L + M K+G +P+ +Y ++ L + +E+ G+++ V E P
Sbjct: 354 ARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPL 413
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+++ + L+K C + +GAS +LK +G+ P + + K GK E ++L
Sbjct: 414 VIS-SILIKAECIS---QGAS-LLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE 468
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQ--VSKEMKCRGC-DIDLDTSTMLIHLLC 330
+ + L + +LCK K+ AIQ K+M RG D D LI L
Sbjct: 469 WIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLE 528
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
F EA F DM G+VP ++ + + G A +L + + S+ +L
Sbjct: 529 EAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNIL 588
Query: 391 DSR 393
R
Sbjct: 589 SCR 591
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 117/280 (41%), Gaps = 6/280 (2%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++L++ K G V + ++ K + P + +Y I+++ +K +D E EM
Sbjct: 697 LMLEAFAKAGDVFEVMKIYNGMKA--AGYLPNMHLYRIMISLLCHNKRFRDVELMVAEME 754
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
P++V TL+ Y DR I + + + G+EP+ YNT+I ++ + F
Sbjct: 755 GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI--VMYSRNFR 812
Query: 197 EVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
G + + + G P + +Y L+ KA E A + + M ++G+ + + Y+
Sbjct: 813 PEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHM 872
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + A +L M E G P T HIL+ D A +V +K
Sbjct: 873 MMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSN 932
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+I + ++ R + + +M R G+ P +
Sbjct: 933 LEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDH 972
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 117/257 (45%), Gaps = 6/257 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT-YGTLVEGYCRLRRVDRAIR 165
P+ ++Y ++ R + A + + + +++ N+++ ++E Y +L+ +A
Sbjct: 550 PSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAEN 609
Query: 166 LVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
VK +++E G++ ++N +I E+G +E + + + P PT+ + +++
Sbjct: 610 FVKGLKQESGVDRR--IWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRAL 667
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
G L+ +++ + S +T F+K G V + M +Y M +GY P+
Sbjct: 668 IVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNM 727
Query: 285 LTYHILLKILCKEDKL-DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
Y I++ +LC + D+ + V+ EM+ G DL L+ + FD +
Sbjct: 728 HLYRIMISLLCHNKRFRDVELMVA-EMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYH 786
Query: 344 DMIRRGLVPHYLTFKRL 360
++ GL P T+ L
Sbjct: 787 SILEAGLEPDEDTYNTL 803
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 4/293 (1%)
Query: 94 YFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
Y H R D + PTV N ++ + + E++ ++ + T
Sbjct: 638 YEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLL 697
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++E + + V +++ M+ G PN +Y +I L RF +V M+
Sbjct: 698 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 757
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +V +L+ Y G+ + ++ ++ G P TYN +S+ + E+
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 817
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +M + G TP +Y ILL K + A + +EM+ +G ++ M++ +
Sbjct: 818 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 877
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+A M G+ P T L + G A+K+ N + S
Sbjct: 878 RNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKS 930
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 121/303 (39%), Gaps = 10/303 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
V + + LI YA +G+ E A F+ + +S ++ +L GR+
Sbjct: 620 VDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVES----VNGMMRALIVDGRLDE 675
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ ++LD + + + ++L + ++ +V + + + M+ PN+ Y +
Sbjct: 676 LYVVVQELQDLDIKISKSTVL--LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIM 733
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ C +R +V EM G +P+ +V NT++ G F+ + L
Sbjct: 734 ISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGL 793
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TY +L+ Y + E +L M RG P +Y K E A
Sbjct: 794 EPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADL 853
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L+ +M GY +R YH+++KI A + MK G + + T +H+L
Sbjct: 854 LFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIAT----MHILM 909
Query: 331 RMY 333
Y
Sbjct: 910 TSY 912
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 1/246 (0%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
++ + + K + AE F +++E+ + + L+ Y + A + M K+G
Sbjct: 594 MIEAYGKLKLWQQAENFVKGLKQESGVDRRI-WNALIHAYAESGLYEHARAIFDIMIKKG 652
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
P N ++ L+ GR +E+ +++ + + T +++ + KAGD+
Sbjct: 653 PLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVM 712
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
KI M + G+LP+ Y + D + +M +G+ PD + + LL +
Sbjct: 713 KIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMY 772
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
D I+V + G + D DT LI + R ++ +E +M +RGL P
Sbjct: 773 TGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKL 832
Query: 355 LTFKRL 360
++K L
Sbjct: 833 ESYKIL 838
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 115/308 (37%), Gaps = 6/308 (1%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+SK T ++++ +A+AG V + + + N L+ I++ LC R +
Sbjct: 690 ISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNM----HLYRIMISLLCHNKRFRD 745
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ + + P + V N LL + + N + + + + P+ TY TL
Sbjct: 746 VELMVAEME--GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 803
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ Y R R + L+ EM K G+ P Y ++ +A +E+ + E
Sbjct: 804 IVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY 863
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
Y ++K Y A + A +L M G P+ T + + G ++A
Sbjct: 864 RLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEK 923
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ + S L Y +L + L I EMK G + D T I
Sbjct: 924 VLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 983
Query: 331 RMYKFDEA 338
+ D+A
Sbjct: 984 LCEQTDDA 991
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ILL ++K + A+ + EMR + N Y +++ Y R +A L
Sbjct: 830 PKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHL 889
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M+++GIEP + ++ +G +E ++ + + Y++++ Y +
Sbjct: 890 LSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLR 949
Query: 227 AGDLE-GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDR 284
D G +K+L+M G P + F R S + +DA+ L + + + G+ P R
Sbjct: 950 NRDYSLGITKLLEMK-RDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIR 1008
Query: 285 L 285
L
Sbjct: 1009 L 1009
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 37/169 (21%)
Query: 246 LPSPTTYNYFFRYFSKFGKVED-------------------------------------A 268
LP+ +N +++ G+ +D A
Sbjct: 58 LPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVA 117
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ L ++ ++G PD +TY+ L+ + LD A+ V +EM C DL T ++ +
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 177
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
R K EA F++++ +G P +T+ L F K G +++C
Sbjct: 178 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVC 226
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 168/344 (48%), Gaps = 10/344 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ ILI R+G V++A + DMVK S++ L+ C+ GR A +
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYS-----DMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK 355
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVE 152
++ S + YNI+ G S V +A ++ + + +P+ VT+GTL+
Sbjct: 356 FW---DSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIH 412
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C +RA ++++ R G E + Y+++I+ + GR + + + + + P
Sbjct: 413 GLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKP 472
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
Y +L+ G+C+ + A KI M S G P+ TYN K K ++A +L
Sbjct: 473 NSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLT 532
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M+E G+ PD TY L++ LC++ K+D+A+++ E+ G +D+ +LIH LC
Sbjct: 533 KEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSA 592
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K DEA + +M + P+ +T+ L D F + G A L
Sbjct: 593 GKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 149/336 (44%), Gaps = 38/336 (11%)
Query: 62 LDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
LD + N+ + A + LL + G + A + + + D +P + Y ++L+G
Sbjct: 216 LDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVR-DPGASPNLATYKVMLDGL 274
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ K+A W M N + VTYG L+ G CR VD A R+ +M K G+ +
Sbjct: 275 CKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDV 334
Query: 180 IVYNTVIDGLVEAGRFEE----------------------VSGMMERFLVCEP------- 210
VYN++I G E GR E G+++ +V E
Sbjct: 335 SVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQL 394
Query: 211 ------GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
P VT+ +L+ G C+ G A +IL+ + G +Y+ F K G+
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGR 454
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
DA +Y+ M++ G P+ Y+ L+ C+ K++ AI++ EM GC + T
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LI LC+ K+ EAS+ ++M+ RG P T+ L
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASL 550
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 13/330 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I+ + +GMV A E L+ + F L+ LC+ G A E
Sbjct: 370 TYNIMTKGLLDSGMVSEAT---ELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEI 426
Query: 95 F----HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ +ELD V Y+ ++N + + DA + M K+ PN Y L
Sbjct: 427 LEDARNSGEELD------VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNAL 480
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G+CR+ +++ AI++ EM G P I YNT+IDGL +A +++E S + + L
Sbjct: 481 INGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGF 540
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + TY SL++G C+ ++ A +I ++ G +N GKV++A
Sbjct: 541 KPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFC 600
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+Y +M E +P+ +TY+ L+ + +D A + + G D+ T I LC
Sbjct: 601 IYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLC 660
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ E +++ G++P +T+ L
Sbjct: 661 SCNRTPEGVLLLNEVLATGIMPTVITWSIL 690
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 17/291 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLC 83
PD K TF LI G A E A N SG L + +++ C
Sbjct: 402 PD---KVTFGTLIHGLCENGYANRAFEILEDARN--------SGEELDVFSYSSMINRFC 450
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K GR A+E + + + P VYN L+NG+ R + DA + ++EM P
Sbjct: 451 KDGRTHDANEVY--KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPT 508
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
++TY TL++G C+ + A L KEM + G +P+ Y ++I GL + + + +
Sbjct: 509 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWD 568
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L ++ + L+ G C AG ++ A I M + P+ TYN F + G
Sbjct: 569 EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIG 628
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ A +L+ ++++G PD +TY+ +K LC ++ + + E+ G
Sbjct: 629 SIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 679
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 9/273 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P F S+ ++++ ++RA M +AA+ F +L + + G LLD+ + R
Sbjct: 79 PRF-SESAALVVLSAFSRALMPDAALAAFR---DLPSLLGCNPGVRSHNTLLDAFVRARR 134
Query: 88 VKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
A +F + AP ++ YNI+L +V A + +R+ V P+ V
Sbjct: 135 YSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRV 194
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY TL+ G + ++D A+ L+ EM G++ +A+ YN ++ G G FE+ + E+
Sbjct: 195 TYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQ- 253
Query: 206 LVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
LV +PG P + TY ++ G CK G + A ++ M++ TY + G
Sbjct: 254 LVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG 313
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
V+ A +Y M+++G D Y+ L+K C+
Sbjct: 314 DVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCE 346
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 2/192 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D LCK + + AS ++ L++ + P +R Y L+ G R K V A R W E
Sbjct: 512 YNTLIDGLCKAEKYQEASSL--TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDE 569
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + +V+ + L+ G C +VD A + EM+++ PN + YNT++DG E G
Sbjct: 570 ILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGS 629
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + L P +VTY + +KG C +L +++ G +P+ T++
Sbjct: 630 IDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSI 689
Query: 255 FFRYFSKFGKVE 266
R K+G ++
Sbjct: 690 LVRAVIKYGPIQ 701
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 40/275 (14%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRK----ENVTPNVVTYGTLVEGYCRLRRVDR 162
P VR +N LL+ + R++ DA+ F+ + + PN+ TY ++ C VDR
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ L +R+ G+ P+ VTY++L+
Sbjct: 177 AVSLFSSLRRRGVAPD-----------------------------------RVTYSTLMS 201
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGYT 281
G K L+ A +L M + G YN + G E AM ++ +++ + G +
Sbjct: 202 GLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGAS 261
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ TY ++L LCK + A +V M D T +LIH LCR D A+
Sbjct: 262 PNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARV 321
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ DM++ GLV + L F + G T A K
Sbjct: 322 YSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 7/172 (4%)
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM----ISRGFLPSPTTYNYFFR 257
+ L C PG + ++ +L+ + +A A + R P+ TYN R
Sbjct: 109 LPSLLGCNPG--VRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILR 166
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
G V+ A++L+ + G PDR+TY L+ L K D+LD A+ + EM G
Sbjct: 167 SLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQA 226
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIR-RGLVPHYLTFKRLNDEFKKRG 368
D L+ R F++A +E ++R G P+ T+K + D K G
Sbjct: 227 DAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY----TPDRLTYHILLKILCKEDK 299
G P ++N F + + DA + + + P+ TY+I+L+ LC
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D A+ + ++ RG D T + L+ L + + D A ++M G+ + +
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 360 LNDEFKKRGMTALAQKL 376
L + GM A K+
Sbjct: 234 LLSGCFRTGMFEKAMKV 250
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 175/362 (48%), Gaps = 19/362 (5%)
Query: 42 RYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL 101
R+ A + AA+W F DS +++ + C+QGR + ++ F + E+
Sbjct: 196 RFEEADALLAAMWAQGFC--------LDSATC--TVVVRAFCRQGRFRNVTDLFRRMSEM 245
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P + Y+ ++G VK A EM + + PNV T+ +L++G C++ ++
Sbjct: 246 GTP--PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWME 303
Query: 162 RAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
RA RL +K ++ +PN Y +I G + G+ ++ R + P TYT+L
Sbjct: 304 RAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTL 363
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G+CK G + A +++ M GFLP+ TYN F K GK+++A + R G
Sbjct: 364 IHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGL 423
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
D++TY IL+ CK+ + A+ + K+M + C D+ T T +I + C+ + +++
Sbjct: 424 HLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQ 483
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRSM---ELLDSRC 394
F+ + GLVP T+ + + + G A K+ M +P S+ L+ S C
Sbjct: 484 LFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLC 543
Query: 395 KD 396
K+
Sbjct: 544 KE 545
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 1/276 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P R + L+ G R ++A+ M + + T +V +CR R L
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M + G PN + Y+ IDGL E G ++ ++E + P + T+TSL+ G CK
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298
Query: 227 AGDLEGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G +E A ++ LK++ S + P+ TY + K GK+ A L +M+E G P+
Sbjct: 299 IGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ CK D A ++ +MK G ++ T +I C+ K EA
Sbjct: 359 TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMA 418
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+GL +T+ L E K+G A L M+
Sbjct: 419 TSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMA 454
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 151/347 (43%), Gaps = 9/347 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I Y + G + A + N ++ + L+ CK G A E
Sbjct: 324 TYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT----YTTLIHGHCKGGSFDRAFEL 379
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+K K + + P + YN ++ G+ + +++A + + + + VTY L+ +
Sbjct: 380 MNKMKL--EGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEH 437
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + A+ L K+M ++ P+ Y T+I + + E+ + ++ L PT
Sbjct: 438 CKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTK 497
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYTS++ GYC+ G L A K+ + M+ G LP TY K ++E+A L+
Sbjct: 498 QTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFET 557
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M++ P +T L C+ DK+ +A+ + R T+ L+ L +
Sbjct: 558 MLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---QAHTADALVRKLSTVGN 614
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
D AS ++++ + + T+ + + ALA ++ +S
Sbjct: 615 LDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKIS 661
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
V P+ ++ LV G CR R + A L+ M +G ++ V+ GRF V
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ + R P MV Y++ + G C+ G ++ A +L+ M+ +G P+ T+
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295
Query: 259 FSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G +E A L+ K+++ S Y P+ TY +++ CKE KL A + M +G
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ +T T LIH C+ FD A M G +P+ T+ + F K+G A K+
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVL 415
Query: 378 NVMSS 382
+ +S
Sbjct: 416 RMATS 420
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 11/180 (6%)
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFR----YFSKFGKVEDAMNLYRKMIESGYT 281
+AG L A+ +L + S G T N+ R + F +A + + G
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARA-AGGVR 178
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD ++ L+ C+E + + A + M +G +D T T+++ CR +F +
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRCK 395
F M G P+ + + D +RG A + M +V L+D CK
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 146/307 (47%), Gaps = 2/307 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ L+D CK G V A F K L P Y++L+NG+F+ ++ + +
Sbjct: 195 IYTTLIDGCCKNGDVMLAKNLFCKMDRL--GLVPNQHTYSVLMNGFFKQGLQREGFQMYE 252
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + + PN Y L+ YC VD+A ++ EMR++GI + YN +I GL
Sbjct: 253 NMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+F E ++ + P +VTY L+ G+C G ++ A ++ + S G P+ TYN
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYN 372
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+SK + A++L ++M E ++TY IL+ + + D A ++ M+
Sbjct: 373 TLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKS 432
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D+ T ++LIH C EAS F+ + L P+ + + + + K G + A
Sbjct: 433 GLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492
Query: 374 QKLCNVM 380
+L N M
Sbjct: 493 LRLLNEM 499
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 19/347 (5%)
Query: 19 LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
+D++G VP+ + T+ +L+ + + G+ +E N +V N A + L
Sbjct: 219 MDRLG--LVPN---QHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPN----AYAYNCL 269
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ C G V A + F + +E + A V YNIL+ G R K +A + ++ K
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMRE--KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV 327
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGR 194
++PN+VTY L+ G+C + ++D A+RL +++ G+ P + YNT+I G + AG
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ V M ER + + VTYT L+ + + + A ++ +M G +P TY+
Sbjct: 388 LDLVKEMEERCI----ARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSV 443
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +++A ++ + E P+ + Y+ ++ CKE A+++ EM G
Sbjct: 444 LIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
++ + + LLCR K+ EA MI GL P +K ++
Sbjct: 504 MVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVH 550
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 1/280 (0%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+Y+ ++N + S + A F M E P T+ L+ R D+A + +
Sbjct: 91 LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL 150
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ + + NA + +I G EAG F V ++ P +V YT+L+ G CK GD+
Sbjct: 151 KSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDV 209
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A + M G +P+ TY+ F K G + +Y M SG P+ Y+ L
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCL 269
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ C + +D A +V EM+ +G + T +LI LCR KF EA + + GL
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
P+ +T+ L + F G A +L N + S S L+
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 41/290 (14%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LI Y GMV+ A F K G + IL+ LC+ + A + HK
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMRE----KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
++ S P + YNIL+NG+ + A R + +++ ++P +VTY TL+ GY ++
Sbjct: 325 NKVGLS--PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382
Query: 159 RVDRAIRLVKEMR-----------------------------------KEGIEPNAIVYN 183
+ A+ LVKEM K G+ P+ Y+
Sbjct: 383 NLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYS 442
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I G G +E S + P V Y +++ GYCK G A ++L M+
Sbjct: 443 VLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
G +P+ ++ + K ++A L +MI SG P Y ++ K+
Sbjct: 503 GMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 9/347 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PDF+ + ILI + G V+ A +E + + + F + +LL L K G
Sbjct: 444 PDFI---VYSILIHGLCKEGFVQRAYQLYE---QMRLKRKFPHHFAQRAVLL-GLFKNGN 496
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A YF +D V +YNI+++G+ R + +A + + +M + +TP+VVT+
Sbjct: 497 ISEARNYFDTWTRMD--LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+CR + A ++++ +R +G+ P+ + Y T+++ E G +E+ +
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEA 614
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
PT VTYT L+KG C+ + + ++L+ M ++G LP TYN + F K ++
Sbjct: 615 NAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITK 674
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ LY M+ P ++TY +L+ LC L ++ ++ R + T +I
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIK 734
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C + +A F M+ +G V + + + KRG+ A+
Sbjct: 735 AHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAK 781
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 166/361 (45%), Gaps = 44/361 (12%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
IL+ LC+Q +++ A + H ++ P++ N +++ + + + A + M
Sbjct: 241 SILIHGLCEQSKLEDAISFLHDSNKV---VGPSIVSINTIMSKFCKVGLIDVARSXFCLM 297
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K + + +Y L+ G C +D A+ +M K G+EP+ + YNT+ G + G
Sbjct: 298 VKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLM 357
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
++++ L+ P +VTYT+L+ G+C+ G++E A K+ + +SRGF + YN
Sbjct: 358 SGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNML 417
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG- 314
K G++E+A+ L+ +M PD + Y IL+ LCKE + A Q+ ++M+ +
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477
Query: 315 ------------------------------CDIDLDTSTMLIHLL----CRMYKFDEASA 340
+DL +L +++ R+ EA
Sbjct: 478 FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRC 394
+ MI RG+ P +TF L + F +RG A+K+ V+ SV L+++ C
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597
Query: 395 K 395
+
Sbjct: 598 E 598
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 55/400 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLD--KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L + + + A L D K+ G P VS +T ++ ++ + G+++ A F
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKVVG---PSIVSINT---IMSKFCKVGLIDVARSXFCL 296
Query: 59 ANNLDMVKN---FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
MVKN DS + + ILL LC G + A + ++ P V YN L
Sbjct: 297 -----MVKNGLLHDSFS--YNILLHGLCVAGSMDEALGFTDDMEK--HGVEPDVVTYNTL 347
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
G+ + A + +M + + P++VTY TL+ G+C++ ++ A++L +E G
Sbjct: 348 AKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF 407
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+ N I YN ++ L + GR EE + + P + Y+ L+ G CK G ++ A +
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467
Query: 236 ILKMM-ISRGF----------------------------------LPSPTTYNYFFRYFS 260
+ + M + R F + YN +
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ + +AM LY KMIE G TP +T++ L+ C+ L A ++ + ++ +G +
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T T L++ C + E +M +VP ++T+ L
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVL 627
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 12/314 (3%)
Query: 43 YARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD 102
Y+R M+ A++ +L NF + + LL ++ + + E+
Sbjct: 180 YSRHEMIHDALFVIAKMKDL----NFQASVPTYNSLLHNM------RHTDIMWDVYNEIK 229
Query: 103 QSWAPTVR-VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
S AP +IL++G ++DA F + K V P++V+ T++ +C++ +D
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLID 288
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A M K G+ ++ YN ++ GL AG +E G + P +VTY +L
Sbjct: 289 VARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLA 348
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
KG+ G + GA K+++ M+ +G P TY + G +E+A+ L ++ + G+
Sbjct: 349 KGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFK 408
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
+ + Y++LL LCK +++ A+ + EM+ + D ++LIH LC+ A
Sbjct: 409 LNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQL 468
Query: 342 FEDMIRRGLVPHYL 355
+E M + PH+
Sbjct: 469 YEQMRLKRKFPHHF 482
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 18/366 (4%)
Query: 20 DKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
D + H V PD V+ +T L + + G++ A + +++ + + L
Sbjct: 330 DDMEKHGVEPDVVTYNT---LAKGFLLLGLMSGARKVVQKM----LLQGLNPDLVTYTTL 382
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ C+ G ++ A + +++ L + + V YN+LL+ + +++A + EM
Sbjct: 383 ICGHCQMGNIEEALKL--RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETL 440
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ P+ + Y L+ G C+ V RA +L ++MR + P+ V+ GL + G E
Sbjct: 441 RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEA 500
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ + + +V Y ++ GY + + A ++ MI RG PS T+N
Sbjct: 501 RNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLING 560
Query: 259 FSKFGKVEDAMNLYRKMIE----SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G + +A RKM+E G P +TY L+ C+ + EM+
Sbjct: 561 FCRRGDLMEA----RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
T T+LI LCR K E+ E M +GL+P +T+ + F K A
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676
Query: 375 KLCNVM 380
+L N+M
Sbjct: 677 QLYNMM 682
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 147/324 (45%), Gaps = 24/324 (7%)
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWF 120
L+ +N+DS ++++L + + + A K K+L+ Q+ PT YN LL+
Sbjct: 160 LEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPT---YNSLLH--- 213
Query: 121 RSKNVKDAERFW---LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
N++ + W E++ + T L+ G C +++ AI + + K + P
Sbjct: 214 ---NMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGP 269
Query: 178 NAIVYNTVID-----GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+ + NT++ GL++ R M++ L+ + +Y L+ G C AG ++
Sbjct: 270 SIVSINTIMSKFCKVGLIDVAR-SXFCLMVKNGLLHDS----FSYNILLHGLCVAGSMDE 324
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A M G P TYN + F G + A + +KM+ G PD +TY L+
Sbjct: 325 ALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLIC 384
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+ ++ A+++ +E RG +++ ML+ LC++ + +EA F++M L P
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL 376
++ + L K G A +L
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQL 468
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + R G + A E +K + L+++ C+ G ++ E
Sbjct: 553 TFNTLINGFCRRGDLMEARKMLEVIR----LKGLVPSVVTYTTLMNAYCEVGNMQ---EM 605
Query: 95 FHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
FH E++ + PT Y +L+ G R + ++ + M + + P+ VTY T+++
Sbjct: 606 FHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQC 665
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM----ERFLV-- 207
+C+ + + +A++L M +P + Y +I+ L G ++V M+ +R +
Sbjct: 666 FCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725
Query: 208 -----------CEPGP------------------TMVTYTSLVKGYCKAGDLEGASKILK 238
C G ++ Y++++ CK G + A
Sbjct: 726 KXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFV 785
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
MM+S G P P F + G +++SG+
Sbjct: 786 MMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKV 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGXLIENFCKVGQYDKAVKLLD 350
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C++ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMEXL 483
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKX 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKXGQYDKAVKLLD 350
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCK 303
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 137/306 (44%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR-VYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNXIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 156/297 (52%), Gaps = 6/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR---SKNVKDAERF 131
F +++++LCK G++ A + K ++P V YN L++G+ + + + A+
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVY--GYSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM + V+PN+ T+ L++G+ + + ++++ KEM + + PN I YN++I+GL
Sbjct: 284 LKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCN 343
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E GM ++ + P ++TY SL+ G+CK G ++ A + + +G P+
Sbjct: 344 GGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRM 403
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + K GK++D L +M G PD TY+ L+ LC+ ++ A ++ ++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+G DL T +L+ C + +A+ ++M + GL P +LT+ + + K G
Sbjct: 464 NKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEG 519
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 179/374 (47%), Gaps = 48/374 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFEILLDSLCK---QGRVKA 90
TF ++I + G + A E DM V + + L+D CK G++
Sbjct: 225 TFNVVINALCKTGKMNKARDVME-----DMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A ++ ++ +P + +NIL++G+++ N+ + + + EM ++V PNV+TY +L
Sbjct: 280 ADAVL--KEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSL 337
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM--------- 201
+ G C +++ AI + +M G++PN I Y+++I+G + G +E M
Sbjct: 338 INGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGT 397
Query: 202 -----MERFLV---CEPG------------------PTMVTYTSLVKGYCKAGDLEGASK 235
M L+ C+ G P + TY L+ G C+ G++E A K
Sbjct: 398 RPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ + ++G LP T++ + G+ A L ++M + G P LTY+I++K C
Sbjct: 458 LFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYC 516
Query: 296 KEDKLDLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
KE L A + +M K R +++ + +L+ + K ++A+ +M+ +GLVP+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 355 LTFKRLNDEFKKRG 368
+T++ + +E +G
Sbjct: 577 ITYEIVKEEMVDKG 590
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 162/328 (49%), Gaps = 12/328 (3%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ +L KQ R A EY +K + + + P V +N+++N ++ + A +M+
Sbjct: 194 LMVALLKQNR-SADVEYLYK-EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKV 251
Query: 138 ENVTPNVVTYGTLVEGYCRL---RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+PNVV+Y TL++GYC+L ++ +A ++KEM + + PN +N +IDG +
Sbjct: 252 YGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDN 311
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + L + P ++TY SL+ G C G + A + M+S G P+ TY+
Sbjct: 312 LPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHS 371
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G +++A++++ + G P Y++L+ CK K+D + +EM+ G
Sbjct: 372 LINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T LI LCR + A F+ + +GL P +TF L + + RG + A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAA 490
Query: 375 KLCNVMSSV---PRSME---LLDSRCKD 396
L MS + PR + ++ CK+
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIMMKGYCKE 518
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+NV N + LV Y R + K G + +A+ ++ L++ R +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSAD 206
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
V + + + + P + T+ ++ CK G + A +++ M G+ P+ +YN
Sbjct: 207 VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLID 266
Query: 258 YFSKF---GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K GK+ A + ++M+E+ +P+ T++IL+ K+D L +++V KEM +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQD 326
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
++ T LI+ LC K +EA + M+ G+ P+ +T+ L + F K GM
Sbjct: 327 VIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN---LDMVKNFDSGASLFEILLDSLC 83
VPD T+ LI R G +EAA F+ N D+V F IL++ C
Sbjct: 433 VPDV---GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVT--------FHILMEGYC 481
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN-VTP 142
+G + A+ + ++ P YNI++ G+ + N+K A +M KE +
Sbjct: 482 SRGESRKAAMLLKEMSKM--GLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
NV +Y L++GY + +++ A L+ EM ++G+ PN I Y V + +V+ G ++ G +
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHL 599
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 206/392 (52%), Gaps = 21/392 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI---WTFE 57
M+ +L + ++FD W LL++ + +S T +++ R A+ V + W F+
Sbjct: 114 MLYILGRNRKFDQIWELLIET--KRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFK 171
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+V +F A F LL +LC++ + A +H L + P ++ +NILL+
Sbjct: 172 -----RLVPDFFDTAC-FNALLRTLCQEKSMTDARNVYH---SLKHQFQPDLQTFNILLS 222
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
GW K+ ++AE F+ EM+ + + P+VVTY +L++ YC+ R +++A +L+ +MR+E P
Sbjct: 223 GW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP 279
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ I Y TVI GL G+ ++ +++ P + Y + ++ +C A L A K++
Sbjct: 280 DVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TTYN FFR S + + LY +M+ + P+ + L+K+ +
Sbjct: 340 DEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH 399
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+K+D+A+++ ++M +G S +L+ LLC + K +EA +M+ +G P ++F
Sbjct: 400 EKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
Query: 358 KRLNDEF----KKRGMTALAQKLCNVMSSVPR 385
KR+ K + L QK+ + +PR
Sbjct: 460 KRIKLLMELANKHDEVNNLIQKMAIFSTEIPR 491
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 182/380 (47%), Gaps = 13/380 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ LA A + D L L ++ VP ++ V + +ARAG + A+ TF A +
Sbjct: 68 VRRLAAAGDVDGVQ-LELQEMRLRGVP--CTEGALVAAVGAFARAGAPDRALKTFYRAVH 124
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF-HKRKELDQSWAPTVRVYNILLNGWF 120
D+ + L+ L+D+L ++ V A + + RK+ Q P V YN+L+
Sbjct: 125 -DLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQ---PNVFTYNLLVRALC 180
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V A + EM + P+ VTYGT+V C L RVD A ++ P A
Sbjct: 181 QNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS-----AAPPVAA 235
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN VI L R +EV ++ + P ++TYT++V +CKAG+L A IL M
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P+ T+ G+V DA+++++ M+ G+ P ++Y++L++ LC L
Sbjct: 296 VITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDL 355
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A V +M+ GC + T + LI + D A + + DM R G P+ + + +
Sbjct: 356 KGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNM 415
Query: 361 NDEFKKRGMTALAQKLCNVM 380
F K+ M A+ L + M
Sbjct: 416 VGVFCKKLMFNQAESLIDKM 435
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 7/286 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ +LC GRV A+E + P YN ++ R +++ +
Sbjct: 207 YGTIVSALCTLGRVDEATEVL-------SAAPPVAASYNAVILALCREFRMQEVFAVVGD 259
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNV+TY T+V +C+ + A ++ M G PN + ++ GL GR
Sbjct: 260 MVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGR 319
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ M + + P+ V+Y L++G C GDL+GAS +L M G P+ TY+
Sbjct: 320 VHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYST 379
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
FSK G ++ A++++ M SG P+ + Y ++ + CK+ + A + +M
Sbjct: 380 LIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVEN 439
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C + T LI LC + A F +M R G P+ T+ L
Sbjct: 440 CPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNEL 485
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 144/327 (44%), Gaps = 3/327 (0%)
Query: 58 FANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
FA DMV + + ++++ CK G ++ A + + P V + L+
Sbjct: 254 FAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM--VITGCTPNVATFTALV 311
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G F V DA W M E P+ V+Y L+ G C + + A ++ +M + G
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF 371
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PNA Y+T+IDG +AG + + P +V YT++V +CK A +
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESL 431
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M+ P+ T+N R +V A+ ++ +M G P+ TY+ LL L +
Sbjct: 432 IDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFR 491
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E A+Q+ EM+ G ++ L T ++ LC+M EA MI RG+ P T
Sbjct: 492 EGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFT 551
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSSV 383
F + + K G +A + M+ V
Sbjct: 552 FTAIIHAYCKEGEVRMAAWILGAMNVV 578
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 162/394 (41%), Gaps = 46/394 (11%)
Query: 4 VLAKAKEF--DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+LA +EF + ++ D +G P+ + T+ ++ + +AG + A
Sbjct: 241 ILALCREFRMQEVFAVVGDMVGRGLQPNVI---TYTTIVNAFCKAGELRMACAILARM-- 295
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
++ + F L+ L GRV A + + + + + WAP+ YN+L+ G
Sbjct: 296 --VITGCTPNVATFTALVGGLFNDGRVHDALDMW--KCMVAEGWAPSTVSYNVLIRGLCS 351
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
++K A +M + PN TY TL++G+ + +D AI + +M + G +PN +V
Sbjct: 352 VGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVV 411
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y ++ + F + ++++ LV P VT+ +L++ C + A + M
Sbjct: 412 YTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMR 471
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY----------------------------- 272
G P+ TYN + G DA+ +
Sbjct: 472 RHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGR 531
Query: 273 ------RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+MI G PD T+ ++ CKE ++ +A + M C ++ T+L+
Sbjct: 532 EAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILM 591
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LC K ++A M+ G+ P+ +T+ L
Sbjct: 592 AELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVL 625
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+V+N F L+ SLC RV A FH+ + P R YN LL+G FR
Sbjct: 436 LVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRR--HGCPPNGRTYNELLHGLFREG 493
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N DA + +EM+ + ++VTY T+V G C++R A+ V M GI+P+A +
Sbjct: 494 NCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFT 553
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I + G + ++ V G ++ YT L+ C LE A L M+
Sbjct: 554 AIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYE 613
Query: 244 GFLPSPTTYNYFFR 257
G P+ T+N R
Sbjct: 614 GIYPNTVTWNVLVR 627
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 8/264 (3%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRV 88
F + T+ LI +++AG ++ AI + DM ++ ++ ++ CK+
Sbjct: 371 FPNARTYSTLIDGFSKAGDLDGAISIWN-----DMTRSGCKPNVVVYTNMVGVFCKKLMF 425
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A K L ++ P +N L+ + V A + EMR+ PN TY
Sbjct: 426 NQAESLIDKM--LVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYN 483
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ G R A+++V EM+ GIE + + YNTV+ GL + E + R +V
Sbjct: 484 ELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVR 543
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P T+T+++ YCK G++ A+ IL M + Y K+EDA
Sbjct: 544 GIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDA 603
Query: 269 MNLYRKMIESGYTPDRLTYHILLK 292
M KM+ G P+ +T+++L++
Sbjct: 604 MVYLLKMLYEGIYPNTVTWNVLVR 627
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+V+ A F ++ + CK+G V+ A+ ++ + VY IL+
Sbjct: 541 IVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVN--CGRNILVYTILMAELCNQD 598
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
++DA + L+M E + PN VT+ LV G R
Sbjct: 599 KLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFR 631
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 184/408 (45%), Gaps = 31/408 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-IWTFEFA 59
++K L K D A LL++ PD VS + +I ++ G VE A + F
Sbjct: 190 LLKALCKNNRVDGACKLLVEMSNKGCEPDVVS---YTTVISSMSKLGKVEEARELSIRFQ 246
Query: 60 NNLDMV-------------------------KNFDSGASLFEILLDSLCKQGRVKAASEY 94
N+ + K D + ++ SL G V+ A
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAV 306
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K + +P V + L+ G+F V +A W M +E PNVV Y TL+ G
Sbjct: 307 WAKM--FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C ++ A+ + +M + G PN Y +IDG +AG S + + + P +
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V YTS+V C++ A +++ M + P+ T+N F + G+VE A+NL+ +
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G +P+ TY+ +L L KE+++ A+++ EM+ +G +++L T + C + K
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
F+EA M+ G+ P +T+ L + +G A +L + +S+
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSA 592
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 11/346 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I+I + R V+ + + ++ LF ++++ + G + A +
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMK----LEGISCSEDLFINVINTYRRVGLAEQALKM 136
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F++ +E PTV++YN LL+ + E + M+++ PNV TY L++
Sbjct: 137 FYRIREF--GCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKAL 194
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ RVD A +L+ EM +G EP+ + Y TVI + + G+ EE + RF P +
Sbjct: 195 CKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNV 249
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
Y +L+ G+C+ ++ +L M+ +G P+ TY+ S G VE A+ ++ K
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAK 309
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G +P+ T+ L+K ++ A+ + M G + ++ LIH LC K
Sbjct: 310 MFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGK 369
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA + M R G P+ T+ L D F K G A ++ N M
Sbjct: 370 MGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 11/329 (3%)
Query: 35 TFVILIRRYARAGMVEAA--IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAAS 92
TF L++ Y G V A IW N + F+ + L+ LC G++ A
Sbjct: 321 TFTSLMKGYFMRGRVLEALNIW------NRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAV 374
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
K + +P V Y L++G+ ++ ++ A W +M PNVV Y ++V
Sbjct: 375 SVSSKMER--NGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVN 432
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
CR +A L+++M + PN + +NT I GL +GR E + + P
Sbjct: 433 VLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ TY ++ G K ++ A +++ M +G + TYN F F GK E+A+ L
Sbjct: 493 NIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLL 552
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-DLDTSTMLIHLLCR 331
KM+ G PD +TY+ L C + K+ AIQ+ ++ G + ++ T L+ +C
Sbjct: 553 GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICN 612
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+EA + M+ G+ + T+ L
Sbjct: 613 QIGVEEAVLYLDKMLNEGICLNAATWNAL 641
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 11/264 (4%)
Query: 34 DTFVILIRRYARAGMVEAA--IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
T+ LI +A+AG + A IW N M ++ +++ LC+ A
Sbjct: 390 STYGALIDGFAKAGDLVGASEIW------NKMMTNGCIPNVVVYTSMVNVLCRSSMFSQA 443
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
K + P +N + G S V+ A + +M + +PN+ TY ++
Sbjct: 444 WSLIEKMS--TDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVL 501
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G + R+ A+ LV EM ++G+E N + YNT+ G G+FEE ++ + LV
Sbjct: 502 DGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVK 561
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG-FLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +TY +L YC G ++ A ++L + + G ++P Y VE+A+
Sbjct: 562 PDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVL 621
Query: 271 LYRKMIESGYTPDRLTYHILLKIL 294
KM+ G + T++ L++ L
Sbjct: 622 YLDKMLNEGICLNAATWNALVRGL 645
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 133/291 (45%), Gaps = 6/291 (2%)
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
AS YF +++ T Y I++ R +V + +M+ E ++ + + +
Sbjct: 62 ASNYFRSIAN-SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINV 120
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ Y R+ ++A+++ +R+ G +P +YN ++D ++ RF+ + +
Sbjct: 121 INTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGK 180
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + TY L+K CK ++GA K+L M ++G P +Y SK GKVE+A
Sbjct: 181 EPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARE 240
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L + + P+ Y+ L+ C+E K+ + +M +G D ++ T + +I L
Sbjct: 241 LSIR-----FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLS 295
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ + A A + M RG P+ TF L + RG A + N M+
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMA 346
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 152/306 (49%), Gaps = 6/306 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I++D LCK+G + A + K + S P V YN L++G+ + +++ E+ E
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCS--PDVVTYNSLIDGYGKCGELEEVEKLVGE 254
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR P+VVTY LV +C+ R++RA EM++EG+ N + ++T +D + G
Sbjct: 255 MRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGM 314
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P VTYT LV G CKAG L+ A + M+ +G + TY
Sbjct: 315 VREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTV 374
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV +A +++R M +G + L Y L+ + A+ + EMK +G
Sbjct: 375 LVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKG 434
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE-FKKRGMT--- 370
++D+ LI LC + K DEA + M GL P+ + + + D FK R +
Sbjct: 435 MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAI 494
Query: 371 ALAQKL 376
AL QK+
Sbjct: 495 ALLQKM 500
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 162/350 (46%), Gaps = 8/350 (2%)
Query: 35 TFVILIRRYARAGMVE-AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ L+ +AG ++ A + T E + + +L+D LCK+G+V A +
Sbjct: 336 TYTCLVDGTCKAGRLDDALVLTNEMVQ-----QGVPLNVVTYTVLVDGLCKEGKVAEAED 390
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + +Y L++G F KN + A EM+ + + +V YG L+ G
Sbjct: 391 VFRLMER--AGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWG 448
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C L+++D A L+ +M + G++PN ++Y ++D +A + E ++++ + P
Sbjct: 449 LCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPN 508
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY +LV G CKAG ++ A M+ G P+ Y K G+++ A+ L
Sbjct: 509 IVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLD 568
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+MI+ G + D + L+ K+ L A + +M G +DL T + C +
Sbjct: 569 EMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLN 628
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
EA +MI G+ P + + L ++ +K G A L N M S+
Sbjct: 629 MIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S+ + LL L +G + A + +EL P R N +L R ++ + A R +
Sbjct: 129 SVVDTLLSLLADRGLLDDAVLALARVREL--RVPPNTRTCNHILLCLARERSSELAWRLF 186
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
++ PNV T+ +++ C+ + A L+ M+ G P+ + YN++IDG +
Sbjct: 187 EQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKC 242
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G EEV ++ C P +VTY +LV +CK G +E A M G + + T+
Sbjct: 243 GELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTF 302
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ F F K G V +AM L+ +M G P+ +TY L+ CK +LD A+ ++ EM
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G +++ T T+L+ LC+ K EA F M R G+ + L + L
Sbjct: 363 QGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTL 410
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 145/297 (48%), Gaps = 8/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ CK GR++ A YF + K + V ++ ++ + ++ V++A + + +
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKR--EGVMANVVTFSTFVDAFCKNGMVREAMKLFAQ 324
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + + PN VTY LV+G C+ R+D A+ L EM ++G+ N + Y ++DGL + G+
Sbjct: 325 MRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384
Query: 195 F---EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
E+V +MER + + YT+L+ G+ + E A +L M +G +
Sbjct: 385 VAEAEDVFRLMERAGI---RANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSL 441
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K+++A +L KM E G P+ + Y ++ K K AI + ++M
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
G ++ T L+ LC+ DEA + F M+ GL P+ + L D K G
Sbjct: 502 DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNG 558
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 5/267 (1%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ DA +R+ V PN T ++ R R + A RL +++ PN +N
Sbjct: 144 LDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNI 199
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+ID L + G E ++ R P +VTY SL+ GY K G+LE K++ M G
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TYN F KFG++E A + + +M G + +T+ + CK + A+
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ +M+ +G + T T L+ C+ + D+A +M+++G+ + +T+ L D
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGL 379
Query: 365 KKRGMTALAQKLCNVMSSVP-RSMELL 390
K G A A+ + +M R+ ELL
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELL 406
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++DSLCK G + F R+ ++ P V VY+ L+NG R +++A + E
Sbjct: 82 YGLVIDSLCKDGLAIKGLKMF--REMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDE 139
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + NV+TY +L+ CR A R +M EGI P+ + + T+ID L + G+
Sbjct: 140 MVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGK 199
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P +VTY SL+ G C ++ A ++ ++M+ RG +YN
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ GK E+AM L+RKM TP TY ILLK L + ++ A ++ M+ G
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
LDT T+L+ LC+ +EA F +
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL 350
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 155/325 (47%), Gaps = 8/325 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ +C +G+V A E F K + + +Y L+N +++ + A M
Sbjct: 15 LVKGMCFEGKVMDALELFDKMTR--SGFQGDILLYGYLINALRKTRQARRAVELHRRMLS 72
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
E + N TYG +++ C+ + +++ +EM GI PN IVY+++I+GL G+ E
Sbjct: 73 EICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLRE 132
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + ++TY SL+ C+ G + A++ M+ G LP T+
Sbjct: 133 AVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLID 192
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ SK GKV++A ++ MI+ G P+ +TY+ LL LC ++D A+++ + M RG I
Sbjct: 193 HLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKI 252
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ + LI+ C K +EA F M L P T+ L + G A++L
Sbjct: 253 DVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELF 312
Query: 378 NVMSSVPRSME------LLDSRCKD 396
N M +S LLD CK+
Sbjct: 313 NNMQICGQSPSLDTYTVLLDGLCKN 337
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 8/285 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI R G+ + A TF MV + F L+D L K+G+V+ A +
Sbjct: 151 TYNSLIHASCRFGLWKEATRTFS-----QMVGEGILPDVVTFTTLIDHLSKKGKVQEAYK 205
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + Q AP + YN LLNG + A R + M + + +V++Y TL+ G
Sbjct: 206 IFELM--IKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC + + A+ L ++M+ E + P+ Y ++ L + GR + +C P+
Sbjct: 264 YCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPS 323
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TYT L+ G CK G +E A + + + S + PS Y+ + + E AM ++
Sbjct: 324 LDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFD 383
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
++ G P+ +TY+I++ LCKE KL A ++ +M+ GC+ D
Sbjct: 384 EIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQD 428
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 154/320 (48%), Gaps = 8/320 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
LI R G + A+ F+ +MV + + + L+ + C+ G K A+ F +
Sbjct: 120 LINGLCRVGKLREAVNLFD-----EMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQ 174
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ + P V + L++ + V++A + + M K+ PN+VTY +L+ G C
Sbjct: 175 M--VGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLH 232
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
++D A+RL + M + GI+ + I YNT+I+G +G+ EE + + E P++ TY
Sbjct: 233 HQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTY 292
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T L+K + G + A ++ M G PS TY K G +E+A++++R +
Sbjct: 293 TILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS 352
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
Y P Y IL+ + + + + A+++ E+ G ++ T ++I+ LC+ K E
Sbjct: 353 IKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLE 412
Query: 338 ASAEFEDMIRRGLVPHYLTF 357
A F M G ++F
Sbjct: 413 AERLFVQMEESGCEQDEISF 432
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 2/301 (0%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F L+ L+++L K + + A E H+R L + + Y ++++ +
Sbjct: 40 FQGDILLYGYLINALRKTRQARRAVE-LHRRM-LSEICSGNFFTYGLVIDSLCKDGLAIK 97
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
+ + EM + PNV+ Y +L+ G CR+ ++ A+ L EM +GI+ N I YN++I
Sbjct: 98 GLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIH 157
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G ++E + + + P +VT+T+L+ K G ++ A KI ++MI +G P
Sbjct: 158 ASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAP 217
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN +++ A+ L+ M+E G D ++Y+ L+ C K + A+ +
Sbjct: 218 NIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLF 277
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
++M+ + T T+L+ L + + A F +M G P T+ L D K
Sbjct: 278 RKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKN 337
Query: 368 G 368
G
Sbjct: 338 G 338
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 155/331 (46%), Gaps = 15/331 (4%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS-GASLFEILLD 80
+G +PD V TF LI ++ G V+ A FE M+K ++ + LL+
Sbjct: 176 VGEGILPDVV---TFTTLIDHLSKKGKVQEAYKIFEL-----MIKQGEAPNIVTYNSLLN 227
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
LC ++ A F E + V YN L+NG+ S ++A + +M+ E +
Sbjct: 228 GLCLHHQMDHAVRLFEVMVE--RGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEEL 285
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
TP++ TY L++ + R+ A L M+ G P+ Y ++DGL + G EE
Sbjct: 286 TPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAID 345
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ + P++ Y+ L+ G +A E A +I + + G +P+ TYN
Sbjct: 346 VFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC 405
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K GK+ +A L+ +M ESG D ++++ +++ +E+++ A++ K M+ + +
Sbjct: 406 KEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDS 465
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ ML++L Y D S+E + LV
Sbjct: 466 VTLMLVNL----YAADAQSSELPNNFLHELV 492
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 35/204 (17%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY----------------- 254
P +VT ++LVKG C G + A ++ M GF Y Y
Sbjct: 7 PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66
Query: 255 ------------FFRY------FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
FF Y K G + ++R+MI G P+ + Y L+ LC+
Sbjct: 67 HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
KL A+ + EM +G ++ T LIH CR + EA+ F M+ G++P +T
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
F L D K+G A K+ +M
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELM 210
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G+ P+ T + + GKV DA+ L+ KM SG+ D L Y L+ L K + A
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+++ + M C + T ++I LC+ + F +MI G+ P+ + + L
Sbjct: 64 VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
VYN LLN +K E + EM + P+VVT+ TL++ CR +V A+ +++EM
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM 207
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ P+ + T++ G VE G E + R L T VT L+ GYCK G +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++ I+ GF P TYN F + V A+ + M++ G+ PD TY+I+
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK +L+ A + +M RGC D+ T LI LC + +EA + +G+
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
P TF L + K G LA +L
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRL 413
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ +LC R++ A + R+ + +P V +NIL+N + + A R +
Sbjct: 357 TTFNTLIAALCTGNRLEEALDL--ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM+ TP+ VTY TL++ C L ++ +A+ L+K+M G + I YNT+IDGL +
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R EE + ++ + +T+ +L+ G CK ++ A +++ MIS G P+ TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N ++ K G ++ A ++ M +G+ D +TY L+ LCK + +A++V + M+
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+G ++ L R +A + F +M G P LT+K
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 178/382 (46%), Gaps = 9/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A + +A +L + PD + TF L++ + G +EAA+ A
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPD---ETTFTTLMQGFVEEGSIEAALRVK--AR 241
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L+M + +L++ CK GRV+ A Y ++E+ + P YN +NG
Sbjct: 242 MLEM--GCSATKVTVNVLINGYCKLGRVEDALGYI--QQEIADGFEPDQITYNTFVNGLC 297
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ +V A + M +E P+V TY +V C+ +++ A ++ +M G P+
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+I L R EE + + V P + T+ L+ CK GD A ++ + M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+ A++L + M +G +TY+ ++ LCK+ ++
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A +V +M +G + T LI LC+ K D+A MI GL P+ +T+ +
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 537
Query: 361 NDEFKKRGMTALAQKLCNVMSS 382
+ K+G A + M++
Sbjct: 538 LTHYCKQGDIKKAADILETMTA 559
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 159/342 (46%), Gaps = 8/342 (2%)
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N L + + ++ LL+ L + ++K + + + P V +N L+
Sbjct: 134 NQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA--RGIKPDVVTFNTLMKAL 191
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R+ V+ A EM V P+ T+ TL++G+ ++ A+R+ M + G
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ N +I+G + GR E+ G +++ + P +TY + V G C+ + A K++ +
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G P TYN K G++E+A + +M++ G PD T++ L+ LC ++
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A+ +++++ +G D+ T +LI+ LC++ A FE+M G P +T+
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 360 LNDEFKKRGMTALAQKLCNVMSSV--PRSM----ELLDSRCK 395
L D G A L M S PRS ++D CK
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 10/370 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + + A +L + +PD TF LI +E A+ + A
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDIT---TFNTLIAALCTGNRLEEAL---DLAR 380
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ VK F IL+++LCK G A F + K + P YN L++
Sbjct: 381 QV-TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK--NSGCTPDEVTYNTLIDNLC 437
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ A +M + +TY T+++G C+ R++ A + +M +GI NAI
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL + + ++ ++ + + P +TY S++ YCK GD++ A+ IL+ M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ GF TY K G+ + A+ + R M G P Y+ +L+ L + + +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR-MYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A+ + +EM G D T ++ LCR EA +M+ +G +P + +F+
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677
Query: 360 LNDEFKKRGM 369
L + GM
Sbjct: 678 LAEGLLNLGM 687
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 158/353 (44%), Gaps = 14/353 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
+K T +LI Y + G VE A+ + ++ F+ + ++ LC+ V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQ----QEIADGFEPDQITYNTFVNGLCQNDHVG-- 303
Query: 92 SEYFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
H K +D + P V YNI++N ++ +++A+ +M P++ T+
Sbjct: 304 ----HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ C R++ A+ L +++ +G+ P+ +N +I+ L + G + E
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +L+ C G L A +LK M S G S TYN K ++E+
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A ++ +M G + + +T++ L+ LCK+ K+D A ++ +M G + T ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
C+ +A+ E M G +T+ L + K G T +A K+ M
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 72/298 (24%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE--------------------- 173
+ +++ P Y ++ + +D LV EMR+E
Sbjct: 65 LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124
Query: 174 ----------------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
GI+ + +VYN +++ LVE + + + + P +VT+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY------------------------- 252
+L+K C+A + A +L+ M SRG P TT+
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 253 ----------NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
N + K G+VEDA+ ++ I G+ PD++TY+ + LC+ D +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A++V M G D D+ T ++++ LC+ + +EA M+ RG +P TF L
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 88/243 (36%), Gaps = 53/243 (21%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K+ D A+ L+ I P+ + T+ ++ Y + G ++ A E
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNI---TYNSILTHYCKQGDIKKAADILETMT 558
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F+ + L++ LCK GR + A + R + PT + YN +L F
Sbjct: 559 ----ANGFEVDVVTYGTLINGLCKAGRTQVALKVL--RGMRIKGMRPTPKAYNPVLQSLF 612
Query: 121 RSKNVKDAER------------------------------------FWLEMRKENVTPNV 144
R N++DA F LEM + P
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672
Query: 145 VTYGTLVEGYCRLRRVD---RAIRLVKE---MRKEGIEP--NAIVYNTVIDGLVEAGRFE 196
++ L EG L D RAI ++ E +R+ + + D L GRF
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVSAIRGYLKIRKFYDALATFGRFL 732
Query: 197 EVS 199
E++
Sbjct: 733 EIN 735
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 8/346 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEY 94
F ILI ++R V+ F F+ ++K F+ A F L++ LC + + A E+
Sbjct: 122 FNILINCFSRLQRVD-----FAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + + P + YN ++ G+ + A +M K P++V Y T+++G
Sbjct: 177 FDEM--VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R V A+ + E++ +G+ P+ Y+ ++ GL + + EE S + + P +
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+ LV CK G L A I+K+MI +G P+ TYN + KV +A ++
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI G P+ ++Y+IL+ CK ++D A ++ EM RG + LI LC+ +
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA F+DM +G P +T L D K G A +L M
Sbjct: 415 HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 159/334 (47%), Gaps = 22/334 (6%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ + RV A K +L + P ++ L+NG A F+ E
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKL--GFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE--- 191
M PN+ TY T+++G+C++ + A+ L+K+M K G P+ ++YNT+IDGL +
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239
Query: 192 ----AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
F E+ G R P + TY+ L+ G C + E AS + M+S +P
Sbjct: 240 VSEALDIFSEIKGKGVR-------PDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMP 292
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
T+N K G + +A + + MIE G P+ TY+ L+ C ++K+ A V
Sbjct: 293 DVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVF 352
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M +GC ++ + +LI+ C+ + DEA F++M RGL+P+ + L +
Sbjct: 353 DAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQA 412
Query: 368 GMTALAQKLCNVMSSVPRSME------LLDSRCK 395
G A++L M + S + LLDS CK
Sbjct: 413 GRHCEARELFKDMQAQGCSPDLVTCTILLDSLCK 446
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 175/375 (46%), Gaps = 23/375 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIR------RYARAGMVEAAIW 54
+I ++ + D A+ +L I PD V TF LI ++ARA
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAV---TFSSLINGLCFEDKFARA-------- 173
Query: 55 TFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYN 113
EF + + + + + ++ CK G+ A K++D++ P + +YN
Sbjct: 174 -MEFFDEM-VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLL---KKMDKAGGRPDIVIYN 228
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+++G + + V +A + E++ + V P+V TY L+ G C + + A L EM
Sbjct: 229 TIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL 288
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
I P+ + +N ++D L + G E G+++ + P TY SL+ GYC + A
Sbjct: 289 NIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEA 348
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ MI++G +P+ +YN + K ++++A L+ +M G P+ Y+ L+
Sbjct: 349 RMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISG 408
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LC+ + A ++ K+M+ +GC DL T T+L+ LC++ D A F M L P+
Sbjct: 409 LCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468
Query: 354 YLTFKRLNDEFKKRG 368
+T+ L K G
Sbjct: 469 LVTYDILIRAMYKSG 483
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 130/257 (50%)
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N++DA + M ++ P +V + L+ R++ + L K + IE + +N
Sbjct: 64 NIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I+ R + ++ + + P VT++SL+ G C A + M++
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G+ P+ TYN + F K GK A+ L +KM ++G PD + Y+ ++ LCK+ + A
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+ + E+K +G D+ T ++L+H LC + +EASA F +M+ ++P +TF L D+
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303
Query: 364 FKKRGMTALAQKLCNVM 380
K GM + AQ + +M
Sbjct: 304 LCKEGMLSEAQGIIKIM 320
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 6/231 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ + E A F +L+++ + + F IL+D LCK+G + A
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT----FNILVDKLCKEGMLSEAQGI 316
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ +++ P YN L+NG+ V +A + M + PNVV+Y L+ GY
Sbjct: 317 I--KIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGY 374
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +R+D A L EM G+ PN YNT+I GL +AGR E + + P +
Sbjct: 375 CKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDL 434
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
VT T L+ CK G L+ A ++ + M P+ TY+ R K GK+
Sbjct: 435 VTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + ++ LL+ R K+ + + +V + L+ + RL+RVD A +
Sbjct: 82 PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EP+A+ ++++I+GL +F + + P + TY +++KG+CK
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A +LK M G P YN K V +A++++ ++ G PD T
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y IL+ LC D+ + A + EM D+ T +L+ LC+ EA + MI
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321
Query: 347 RRGLVPHYLTFKRLNDEF 364
+G+ P+Y T+ L + +
Sbjct: 322 EKGVEPNYATYNSLMNGY 339
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 13/302 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+IK K + A LL +DK GG PD V +T +I + +V A+ F
Sbjct: 195 IIKGFCKIGKTTVAVGLLKKMDKAGGR--PDIVIYNT---IIDGLCKDRLVSEALDIFSE 249
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
K + IL+ LC + + AS F++ L+ P V +NIL++
Sbjct: 250 IKG----KGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN--IMPDVVTFNILVDK 303
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +A+ M ++ V PN TY +L+ GYC +V A + M +G PN
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YN +I+G +A R +E + + P Y +L+ G C+AG A ++ K
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M ++G P T K G +++A+ L+R M +S P+ +TY IL++ + K
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
Query: 299 KL 300
K+
Sbjct: 484 KI 485
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 206/392 (52%), Gaps = 21/392 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI---WTFE 57
M+ +L + ++FD W LL++ + +S T +++ R A+ V + W F+
Sbjct: 113 MLYILGRNRKFDQIWELLIET--KRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFK 170
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+V +F A F LL +LC++ + A +H L + P ++ +NILL+
Sbjct: 171 -----RLVPDFFDTAC-FNALLRTLCQEKSMTDARNVYH---SLKHQFQPDLQTFNILLS 221
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
GW K+ ++AE F+ EM+ + + P+VVTY +L++ YC+ R +++A +L+ +MR+E P
Sbjct: 222 GW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP 278
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ I Y TVI GL G+ ++ +++ P + Y + ++ +C A L A K++
Sbjct: 279 DVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 338
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TTYN FFR S + + LY +M+ + P+ + L+K+ +
Sbjct: 339 DEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH 398
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+K+D+A+++ ++M +G S +L+ LLC + K +EA +M+ +G P ++F
Sbjct: 399 EKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 458
Query: 358 KRLNDEF----KKRGMTALAQKLCNVMSSVPR 385
KR+ K + L QK+ + +PR
Sbjct: 459 KRIKLLMELANKHDEVNNLIQKMAIFSTEIPR 490
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKX 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLD 350
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 136/306 (44%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQXXKAETLVRQLXKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 165/341 (48%), Gaps = 8/341 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL--FEILLDSLCKQGRV 88
V + FV++ + Y +A + E A+ F+ M F+ ++ F +L+ + ++G
Sbjct: 93 VVEKCFVVIFKAYGKAHLPEKAVGLFD-----RMAYEFECKRTVKSFNSVLNVIIQEGLF 147
Query: 89 KAASEYF-HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A E++ H + +P V +N+++ + V DA + + +M P+V TY
Sbjct: 148 YRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTY 207
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++G C+ R+D A+ L+ EM+ +G P+ + +N +I+GL + G V+ +++ +
Sbjct: 208 CTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFL 267
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +L+ G C G LE A +L M+S +P+ TY K G+ D
Sbjct: 268 KGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALD 327
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
+ M E GY + Y L+ L KE K A+Q+ KEM + C+++ + +I
Sbjct: 328 GARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVID 387
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LCR K DEA +M P+ T+ L F + G
Sbjct: 388 GLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAG 428
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 149/328 (45%), Gaps = 12/328 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI G +E AI + + V N + + +++ L KQGR +
Sbjct: 276 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVT----YGTIINGLVKQGRALDGARV 331
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+E + + VY+ L++G F+ ++A + + EM + N + Y +++G
Sbjct: 332 LALMEE--RGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGL 389
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR + D A+ ++ EM +PNA Y++++ G EAG + M +
Sbjct: 390 CRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNE 449
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V Y+ L+ G CK G ++ A + M+ +G P Y S G VEDA+ LY +
Sbjct: 450 VCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNE 509
Query: 275 MI--ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M+ E PD +TY+ILL LCK+ + AI + M RGCD DL T + + L
Sbjct: 510 MLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREK 569
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ EF D GLV L +R+
Sbjct: 570 LDPPQDGREFLD----GLVVRLLKRQRV 593
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 178/394 (45%), Gaps = 24/394 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK + K D A + D PD T+ L+ +A ++ A+ +
Sbjct: 175 VIKTMCKVGLVDDAVQMFRDMPVSKCQPDVY---TYCTLMDGLCKADRIDEAV---SLLD 228
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + F S + F +L++ LCK+G + ++ + AP YN L++G
Sbjct: 229 EMQIDGCFPSPVT-FNVLINGLCKKGDLARVAKLVDNM--FLKGCAPNEVTYNTLIHGLC 285
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ A M PNVVTYGT++ G + R R++ M + G N
Sbjct: 286 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEY 345
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VY+ +I GL + G+ +E + + V E + Y++++ G C+ G + A ++L M
Sbjct: 346 VYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEM 405
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P+ TY+ + F + G A+ +++ M + +T + + Y +L+ LCK+ K+
Sbjct: 406 TNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKV 465
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI--RRGLVPHYLTFK 358
A+ V +M +GC D+ +I+ L ++A + +M+ P +T+
Sbjct: 466 KEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYN 525
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
L + AL ++ SS+ R+++LL+S
Sbjct: 526 IL--------LNALCKQ-----SSISRAIDLLNS 546
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 137/325 (42%), Gaps = 33/325 (10%)
Query: 4 VLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD 63
++ + + D A L L + G+ V ++V + LI + G + A+ F+
Sbjct: 319 LVKQGRALDGARVLALMEERGYHVNEYV----YSALISGLFKEGKSQEAMQLFKEMT--- 371
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
VK + ++ ++D LC+ G+ A E + + P Y+ L+ G+F +
Sbjct: 372 -VKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT--NNRCKPNAYTYSSLMKGFFEAG 428
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
N A W +M K N T N V Y L+ G C+ +V A+ + +M +G +P+ + Y
Sbjct: 429 NGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYG 488
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
++I+GL AG E+ + L EP P +VTY L+ CK + A +L M+
Sbjct: 489 SMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSML 548
Query: 242 SRGFLPSPTTYNYFFRYFS---------------------KFGKVEDAMNLYRKMIESGY 280
RG P T F R K +V A + M++
Sbjct: 549 DRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLL 608
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQ 305
P T+ +++ LC K+ AIQ
Sbjct: 609 PPKPSTWTRVVEDLCNPKKVQAAIQ 633
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%)
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I PN + +N VI + + G ++ M V + P + TY +L+ G CKA ++ A
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+L M G PSP T+N K G + L M G P+ +TY+ L+ L
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGL 284
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C + KL+ AI + M C ++ T +I+ L + + + + M RG +
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNE 344
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
+ L K G + A +L
Sbjct: 345 YVYSALISGLFKEGKSQEAMQL 366
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 170/347 (48%), Gaps = 11/347 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ++++ + V++A V N + ++++L+ +L + RV A +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPN----SIIYQMLIHALSENNRVNEAMKL 257
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P V+ +N +++G ++ + +A + M + T + + G L+ G
Sbjct: 258 LEEM--FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGL 315
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-GPT 213
CR+ +VD A + M + PN ++YNT+I+G V +GRFEE ++ + +V P
Sbjct: 316 CRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ ++ G CK G L A + L M+ +GF P+ TY F K G E+A +
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G + + + Y+ L+ LCK+ K+ A+Q+ EM +GC D+ T LI+ LC+
Sbjct: 432 SMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
K +EA + DM+ G++ + +T+ L F + + A KL M
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 14/348 (4%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
I G E F TF I+I + G + +A+ EF + + + K F+ + IL+D
Sbjct: 365 IAGFEPDAF----TFNIMIDGLCKKGYLVSAL---EFLDEM-VKKGFEPNVITYTILIDG 416
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
CKQG + AS+ + + + YN L+ + ++DA + + EM +
Sbjct: 417 FCKQGHFEEASKVVNSMSA--KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCK 474
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P++ T+ +L+ G C+ +++ A+ L ++M EG+ N + YNT+I + ++ +
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKL 534
Query: 202 ME--RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ RF C +TY L+K CK G E +++ M PS + N F
Sbjct: 535 VGEMRFRGCPLDN--ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
+ GKV DA+ R MI+ G TPD +TY+ L+ LCK + A+ + ++ +G D
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
T LI C F++A + G +P+ +T+ L + F K
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 46/384 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF +I +AG + A + ++++F + A + L+ LC+ G+V A
Sbjct: 272 TFNDVIHGLCKAGRIHEAAKLHDRM----LLRDFTADALIQGYLMHGLCRMGKVDEA--- 324
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA-ERFWLEMRKENVTPNVVTYGTLVEG 153
R L + P +YN L+NG+ S ++A + + M P+ T+ +++G
Sbjct: 325 ---RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDG 381
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ + A+ + EM K+G EPN I Y +IDG + G FEE S ++
Sbjct: 382 LCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLN 441
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
V Y L+ CK G ++ A ++ M S+G P T+N K K+E+A+ LYR
Sbjct: 442 TVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYR 501
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID--------------- 318
M+ G + +TY+ L+ + + + A ++ EM+ RGC +D
Sbjct: 502 DMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTG 561
Query: 319 --------------------LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+++ +LI+ CR K ++A DMI+RGL P +T+
Sbjct: 562 ATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYN 621
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
L + K G A L N + +
Sbjct: 622 SLINGLCKMGRFQEALNLFNGLQA 645
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 166/371 (44%), Gaps = 14/371 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K E DSA LL D VP+ + + +LI + V A+ E
Sbjct: 206 VMKAFCMVNEVDSACSLLRDMTKHGCVPNSI---IYQMLIHALSENNRVNEAMKLLEEM- 261
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + F ++ LCK GR+ A++ H R L + + + L++G
Sbjct: 262 ---FLMGCEPDVQTFNDVIHGLCKAGRIHEAAK-LHDRMLL-RDFTADALIQGYLMHGLC 316
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNA 179
R V +A M + PN V Y TL+ GY R + A L+ K M G EP+A
Sbjct: 317 RMGKVDEAR----AMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+N +IDGL + G ++ + P ++TYT L+ G+CK G E ASK++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M ++G + YN K GK++DA+ +Y +M G PD T++ L+ LCK DK
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A+ + ++M G + T LIH R+ +A +M RG +T+
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 360 LNDEFKKRGMT 370
L K G T
Sbjct: 553 LIKALCKTGAT 563
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 152/306 (49%), Gaps = 2/306 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
++ F+ A F I++D LCK+G + +A E+ + + + + P V Y IL++G+ +
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM--VKKGFEPNVITYTILIDGFCKQG 421
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ ++A + M + ++ N V Y L+ C+ ++ A+++ EM +G +P+ +N
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++I GL + + EE G+ L+ VTY +L+ + + ++ A K++ M R
Sbjct: 482 SLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFR 541
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G TYN + K G E + L +M P + +IL+ C+ K++ A
Sbjct: 542 GCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDA 601
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+Q ++M RG D+ T LI+ LC+M +F EA F + +G+ P +T+ L
Sbjct: 602 LQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISR 661
Query: 364 FKKRGM 369
+ G+
Sbjct: 662 YCYEGL 667
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 32/310 (10%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ PT + YN++L K A + +M ++P V T+G +++ +C + VD A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+++M K G PN+I+Y +I L E R E ++E + P + T+ ++ G
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 225 CKAGDLEGASKILKMMISRGF-----------------------------LPSPTT--YN 253
CKAG + A+K+ M+ R F +P+P T YN
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 254 YFFRYFSKFGKVEDAMN-LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ G+ E+A + LY+ M+ +G+ PD T++I++ LCK+ L A++ EM
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G + ++ T T+LI C+ F+EAS M +GL + + + L K G
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 373 AQKLCNVMSS 382
A ++ MSS
Sbjct: 461 ALQMYGEMSS 470
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 41/299 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI + + G E A + N++ K + L+ +LCK G+++ A +
Sbjct: 409 TYTILIDGFCKQGHFEEAS---KVVNSMS-AKGLSLNTVGYNCLIGALCKDGKIQDALQM 464
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P + +N L+ G ++ +++A + +M E V N VTY TL+ +
Sbjct: 465 YGEMSS--KGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-------- 206
RL + +A +LV EMR G + I YN +I L + G E+ G++E+
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSI 582
Query: 207 ---------VCEPG------------------PTMVTYTSLVKGYCKAGDLEGASKILKM 239
C G P +VTY SL+ G CK G + A +
Sbjct: 583 NSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNG 642
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ ++G P TYN + G DA L K + +G+ P+ +T+ IL+ K +
Sbjct: 643 LQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNN 701
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y L+ G+ + K+LK M G + + + RY+ K G A L M
Sbjct: 97 YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156
Query: 277 ES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ P +Y+++L+IL + +A V +M RG + T +++ C + +
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D A + DM + G VP+ + ++ L + A KL
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKL 257
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
V D F +LI+ Y + G+ + A+ TF + D + + + ++LD L ++ +
Sbjct: 124 VHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYT----YNMILDVLIQKNFLLL 179
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + + +L+ P V ++IL++G +S NVKDA + EM + + P+ TY +
Sbjct: 180 ALTVYTRMMKLN--CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVV 237
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G CR +RVD A RL +M+ G+ P+ + N +++G R +E ++ F
Sbjct: 238 ISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGY 297
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ Y+ L++G +A E + + MI P Y + ++ GKV DA+
Sbjct: 298 VLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALE 357
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M ESG PD + Y++L+K C L A + E+ C ++ T ++LI +C
Sbjct: 358 LLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMC 417
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
R +A F +M + G P +TF L D K G A L
Sbjct: 418 RNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLL 463
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 151/327 (46%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+ K G A E F ++ D + P V YN++L+ + + A +
Sbjct: 129 FFVLIKVYLKMGLTDKAMETFGSMRDFDCT--PDVYTYNMILDVLIQKNFLLLALTVYTR 186
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K N PNV T+ L++G C+ V A+ L EM + GI P+A Y VI GL + R
Sbjct: 187 MMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + ++ GP VT +L+ G+C ++ A +L++ G++ Y+
Sbjct: 247 VDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSC 306
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
R + + ED LYRKMIE PD Y I++K L + K+ A+++ EM G
Sbjct: 307 LIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESG 366
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D +LI C M EA + ++ R P+ T+ L + G+T AQ
Sbjct: 367 VVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQ 426
Query: 375 KLCNVMSSV---PRSM---ELLDSRCK 395
++ N M + P ++ L+D CK
Sbjct: 427 EIFNEMEKLGCYPSAVTFNSLIDGLCK 453
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 15/285 (5%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
N L+ I++ L + G+V+ A E ++ E P YN+L+ G+ +
Sbjct: 331 NVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTE--SGVVPDTVCYNVLIKGFCDMGLLS 388
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
+A LE+ + + PNV TY L+ G CR A + EM K G P+A+ +N++I
Sbjct: 389 EARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLI 448
Query: 187 DGLVEAGRFE---------EVSGMMERFLVCEPGPTMV----TYTSLVKGYCKAGDLEGA 233
DGL + G+ E E+ FL GP+ V + +V+ C +G + A
Sbjct: 449 DGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKA 508
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+IL + G P TYN F K G A L+R+M G +PD +TY L+
Sbjct: 509 YRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLING 568
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
L + + + A +V +M+ GC D ++ +CR + A
Sbjct: 569 LLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRA 613
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 162/407 (39%), Gaps = 85/407 (20%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ILI ++G V+ A+ F+ ++ + A + +++ LC+ RV A
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPD----AFTYCVVISGLCRSKRVDDAYRL 253
Query: 95 FHKRKE-------------------LDQ--------------SWAPTVRVYNILLNGWFR 121
F K K+ LD+ + VR Y+ L+ G FR
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+K +D + + +M ++NV P+V Y +++G +V A+ L+ EM + G+ P+ +
Sbjct: 314 AKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC 373
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I G + G E + + P + TY+ L+ G C+ G A +I M
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM-------------------------- 275
G PS T+N K G++E A L+ KM
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQ 493
Query: 276 ----------------------IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+SG P TY+IL+ CK + A ++ +EM+ +
Sbjct: 494 KMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFK 553
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T LI+ L R + ++A F+ M + G P ++ +
Sbjct: 554 GLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTM 600
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 142/339 (41%), Gaps = 56/339 (16%)
Query: 30 FVSKDTFVILIRRYARAGMVEAA---IWTFEFANNLDMVKNFDSGASL------FEILLD 80
+ S TF LI + G +E A + E N + G S + +++
Sbjct: 438 YPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVE 497
Query: 81 SLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
LC G + A + D AP + YNIL+NG+ + N A + + EM+ + +
Sbjct: 498 QLCDSGLIHKAYRILMQLA--DSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGL 555
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV--------------- 185
+P+ VTYGTL+ G R +R + A ++ +M K G P+A VY T+
Sbjct: 556 SPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFS 615
Query: 186 -------------------IDGLVEAGRFEE-VSGMME---RFLVCEPGPTMVTYTSLVK 222
I+G E E+ V G++E + + GP Y +
Sbjct: 616 LWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGP----YAIWLI 671
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY-T 281
G C+ + A KI ++ + +P + K G ++ A++++ IE GY
Sbjct: 672 GLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLL 731
Query: 282 PDRLTYHILLKILCKEDKL--DLAIQVSKEMKCRGCDID 318
R+ IL K++ ++ ++ D AI + MK G D+D
Sbjct: 732 RRRVANRILTKLVRRKGEMGKDRAIYLLCRMKSVGYDLD 770
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
LE + L+ + + G + + + K G + AM + M + TPD TY++
Sbjct: 107 LELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNM 166
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+L +L +++ L LA+ V M C ++ T ++LI LC+ +A F++M +RG
Sbjct: 167 ILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRG 226
Query: 350 LVPHYLTF----------KRLNDEFK 365
++P T+ KR++D ++
Sbjct: 227 ILPDAFTYCVVISGLCRSKRVDDAYR 252
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 162/342 (47%), Gaps = 15/342 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++R Y G A+ E N ++ N A L+ I+L LCK G+ K A +
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPAN----AKLYNIILTHLCKHGKEKEALDL 61
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H S AP + YNIL+N + ++DA+ M+ + ++VTY TL+ G
Sbjct: 62 LHSMAT--TSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGL 119
Query: 155 CRLR----RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
CR RV+RA RL +EM +G P ++ Y VID L+ E+ +++ L+ E
Sbjct: 120 CRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLD--LMHEN 177
Query: 211 GPT--MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
G +VTY L+ + KAG ++ A + M +RG +P TYN F K GKVE+A
Sbjct: 178 GCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEA 237
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
L+ +M G P+ TY + K ++ A EM+ G +D + LI
Sbjct: 238 NKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALIST 296
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+C++ K +M+ +G P+ +TF + + K T
Sbjct: 297 ICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNT 338
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N TY T+V GYC +A+ L++ M+ + NA +YN ++ L + G+ +E ++
Sbjct: 3 NAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLL 62
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P + TY L+ CK G LE A +++MM +R TYN +
Sbjct: 63 HSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRK 122
Query: 263 G----KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
G +VE A L+ +M++ G+TP +TY +++ L + + A +V M GC D
Sbjct: 123 GNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFD 182
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
L T MLI+ + D+A F +M RG +P +T+ + D F K G A KL
Sbjct: 183 LVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKL 240
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 6/286 (2%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
+ A + ++ C+ G + A K + ++YNI+L + K+A
Sbjct: 2 ANAFTYSTIVRGYCEDGETRQALALLEHMK--NAEVPANAKLYNIILTHLCKHGKEKEAL 59
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
M + P++ TY L+ C++ R++ A LV+ M+ + + YNT+I GL
Sbjct: 60 DLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGL 119
Query: 190 VEAG----RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
G R E + E + PT VTYT ++ + E A K+L +M G
Sbjct: 120 CRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGC 179
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
TYN F+K G ++ AM+L+ +M G PD +TY+ ++ CK K++ A +
Sbjct: 180 AFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANK 239
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ EMK RG + T T + + + +A A +M + GLV
Sbjct: 240 LFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV 285
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 11/273 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG----RVKA 90
T+ ILI + G +E A E D + + + L+ LC++G RV+
Sbjct: 76 TYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVT----YNTLIHGLCRKGNGRFRVER 131
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A F + +D+ PT Y ++++ R K + A++ M + ++VTY L
Sbjct: 132 AFRLFEEM--VDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNML 189
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ + + +D+A+ L EM G P+ + YN+V+DG +AG+ EE + +
Sbjct: 190 INRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGI 249
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TYTS+ KAG ++ A L M G + + +Y K GK +
Sbjct: 250 FPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDA-ISYVALISTICKLGKGKLGFQ 308
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
L R+M+E G+ P+ +T++++ + L KE D A
Sbjct: 309 LLREMLEKGFKPNLVTFNVVFEALSKESNTDDA 341
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 20/275 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVP-DFVSKDTFVI-LIRRYARAGMVEAAIWTFEF 58
+I L K + A L+ + + + P D V+ +T + L R+ VE A FE
Sbjct: 80 LINALCKVGRLEDAQGLV-EMMQARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFE- 137
Query: 59 ANNLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+MV + S+ + +++D+L + + A + E A + YN+L+N
Sbjct: 138 ----EMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHE--NGCAFDLVTYNMLIN 191
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ ++ + A ++EM P+VVTY ++V+G+C+ +V+ A +L EM+ GI P
Sbjct: 192 RFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFP 251
Query: 178 NAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
N Y ++ D ++AGR ++ M + LV ++Y +L+ CK G +
Sbjct: 252 NGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV-----DAISYVALISTICKLGKGKLG 306
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
++L+ M+ +GF P+ T+N F SK +DA
Sbjct: 307 FQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDA 341
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 4/169 (2%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY+++V+GYC+ G+ A +L+ M + + YN + K GK ++A++L M
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM--- 332
+ PD TY+IL+ LCK +L+ A + + M+ R C D+ T LIH LCR
Sbjct: 66 ATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNG 125
Query: 333 -YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++ + A FE+M+ +G P +T+ + D + M AQK+ ++M
Sbjct: 126 RFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLM 174
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 158/333 (47%), Gaps = 8/333 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+ + F ++ R Y RA + AI F + + +G + LL LCK+ VK
Sbjct: 121 ICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGV----KAGVGDVDQLLYVLCKRKHVKQ 176
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E+F K ++ P + Y+IL+ GW + +A + + EMR+ +VV Y +L
Sbjct: 177 AQEFFDK---VNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSL 233
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+E C+ VD A +L +EM G+ P+A Y+ I E +++R
Sbjct: 234 LEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNL 293
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + TY +VK CK+ ++ A ++L MI RG P +YN + +V A+
Sbjct: 294 VPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALR 353
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M + PDR TY+++LK+L + + D V M+ RG T +++H C
Sbjct: 354 LISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFC 413
Query: 331 RMY-KFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ K +EA FE MI G+ P+ T + L +
Sbjct: 414 KKKGKLEEACKYFEMMIDDGIPPYSCTVELLRN 446
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 11/347 (3%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVY 112
IW +F +++ + + +F ++ + C+ A FH+ D V
Sbjct: 106 IW--DFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMG--DFGVKAGVGDV 161
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+ LL + K+VK A+ F+ ++ E V PN TY L+ G+ + A +L +EMR+
Sbjct: 162 DQLLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRE 220
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G + + YN++++ L + G +E + P +Y+ ++ YC+ D+
Sbjct: 221 RGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHS 280
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A ++L M +P+ TYN + K KV++A L +MIE G +PD +Y+ +
Sbjct: 281 AFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQA 340
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C +++ A+++ M+ C D T M++ +L R+ +FD + + M RG P
Sbjct: 341 FHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYP 400
Query: 353 HYLTFKRLNDEF-KKRGMTALAQKLCNVM--SSVPR---SMELLDSR 393
T+ + F KK+G A K +M +P ++ELL +R
Sbjct: 401 AASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNR 447
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
G + +++++D LC G A E +EL + PTV +YN ++ G R+ V DA +
Sbjct: 53 GETTYKLVVDGLCGAGMANQALELV---RELSGVYTPTVFIYNGIITGLCRASRVMDAYK 109
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+M +E++ PNV TY L+ G CR + A + +EM++ G +PN I Y T+I L
Sbjct: 110 VLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLS 169
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AG +E +M E ++T T++V G CKA L+ A K ++ M G P+
Sbjct: 170 RAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEV 229
Query: 251 TYNYFFRYFSKFGKVEDAMNLY-RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ F + G+++ + + + G + + Y L LCK LD A + +E
Sbjct: 230 TYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEE 289
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ G D+ T +MLI+ R +FD + EDM R G+ P +T+ L
Sbjct: 290 LRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTL 340
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 172/384 (44%), Gaps = 43/384 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +++ AGM A+ E L V + ++ ++ LC+ RV A +
Sbjct: 56 TYKLVVDGLCGAGMANQAL---ELVRELSGV--YTPTVFIYNGIITGLCRASRVMDAYKV 110
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K +++S P V Y ILLNG RS K A + EM++ PN +TYGTL++
Sbjct: 111 LEKM--VEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHL 168
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R +D A+R++ E R + + I T++ GL +A R ++ ME P
Sbjct: 169 SRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNE 228
Query: 215 VTYTSLVKGY------------------------------------CKAGDLEGASKILK 238
VTY++LV G+ CKAG L+ A K ++
Sbjct: 229 VTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVE 288
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ G +P TY+ F++ G+ + ++ L M +G PD +TY L+ +LCKE
Sbjct: 289 ELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKER 348
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K A ++ + M+ G ++ T ++ LC+ K DE +E M++ P +T+
Sbjct: 349 KFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYS 408
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
+ + K GM A KL ++ S
Sbjct: 409 IIMNGLSKAGMLDSAVKLFELIKS 432
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 159/359 (44%), Gaps = 57/359 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ +RAG ++ A+ +L++ + + ++ + LCK R+ A ++
Sbjct: 160 TYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTI----VGGLCKASRLDDALKF 215
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE-------------------- 134
+ +++ P Y+ L++G+ + + RF+ E
Sbjct: 216 MEEMRQM--GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDA 273
Query: 135 ----------------MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+R+ V P+VVTY L+ + R + D ++ L+++MR+ G++P+
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+T+I+ L + +F++ ++E P +VTY S++ G CK+G ++ ++ +
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MM+ P TY+ SK G ++ A+ L+ + S PD Y +++ LC+
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453
Query: 299 KLDLA--------IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
KL+ A + V+ + CR L+ LC + D A E RG
Sbjct: 454 KLEEACGMYHGMEVTVAGDNICRAL-------AGLVAALCDAKRTDSARRIVEVARERG 505
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 40/353 (11%)
Query: 69 DSG---ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
DSG ++ ++L+D+ K GRV+ A+E + D+ AP++R N LL R+ +
Sbjct: 168 DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMR--DRGMAPSIRCCNALLKDLLRADAM 225
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ M ++P+V TY TL+E YC++R D A +++ EMR+ G N + YN +
Sbjct: 226 ALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL 285
Query: 186 IDGLVEAGRFEEVSG-----------------------------------MMERFLVCEP 210
I GL +G EE G +++ E
Sbjct: 286 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 345
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +V Y +L+ G+ + G+ + A K++K M++ G P+ TY+ R K G+++ A
Sbjct: 346 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 405
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L ++M+ + PD +TY+++++ + A ++ EM+ G ++ T +++IH LC
Sbjct: 406 LLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 465
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ + ++AS E+M +GL P+ + L + + G +LA ++ + M+ V
Sbjct: 466 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 518
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 51/366 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
++ L+ LCK G++ AS ++ + S P YN+++ G FR + KDA R E
Sbjct: 387 YDNLVRGLCKMGQMDRASLLL--KQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSE 444
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV------------- 181
M ++PNV TY ++ G C+ ++A L++EM +G++PNA V
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 504
Query: 182 ----------------------YNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMV 215
YN++I GL + GR EE + M ER L+ P
Sbjct: 505 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL----PNEF 560
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY+ L+ GY K GDLE A ++++ M+ G P+ Y + K +E + ++ M
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
++ G D Y IL+ L ++ A +V ++ G D+ + LI LC+
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---EL 389
++A ++M ++G+ P+ + + L D K G + A+ + N + + VP + L
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740
Query: 390 LDSRCK 395
+D CK
Sbjct: 741 IDGSCK 746
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 171/380 (45%), Gaps = 9/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L K + D A LL + PD + T+ ++I + R + A
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTI---TYNLIIEGHFRHHSKKDAFRLLSEME 446
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + N + + I++ LC+ G + AS+ + + P VY L++G+
Sbjct: 447 NAGISPNVYT----YSIMIHGLCQSGEPEKASDLLEEMTT--KGLKPNAFVYAPLISGYC 500
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R NV A + +M K NV P++ Y +L+ G ++ RV+ + + +M++ G+ PN
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 560
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I G ++ G E +++R L P V Y L++ Y K+ D+E S K M
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G + Y S G +E A + + ++G PD Y L+ LCK
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A + EM +G D ++ LI LC+ A F ++ +GLVP+ +T+ L
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740
Query: 361 NDEFKKRGMTALAQKLCNVM 380
D K G + A L N M
Sbjct: 741 IDGSCKVGDISNAFYLYNEM 760
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 164/361 (45%), Gaps = 51/361 (14%)
Query: 65 VKNFDSGASL------FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
V+ F GA + + L+++ CK A + + +E + YN+L+ G
Sbjct: 231 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE--RGCGLNTVTYNVLIAG 288
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
RS V++A F +M + P+ TYG L+ G C+ RR + A L+ EM ++PN
Sbjct: 289 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 348
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+VY +IDG + G +E M++ + P +TY +LV+G CK G ++ AS +LK
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 408
Query: 239 MMISRGFLPSPTTYNYF----FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
M+ P TYN FR+ SK +DA L +M +G +P+ TY I++ L
Sbjct: 409 QMVRDSHRPDTITYNLIIEGHFRHHSK----KDAFRLLSEMENAGISPNVYTYSIMIHGL 464
Query: 295 CKEDKLDLAIQVSKEMKCRG------------------------CDI-----------DL 319
C+ + + A + +EM +G C+I DL
Sbjct: 465 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 524
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
LI L ++ + +E++ F M RGL+P+ T+ L + K G A++L
Sbjct: 525 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 584
Query: 380 M 380
M
Sbjct: 585 M 585
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 42/369 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+ LI Y R G V A F+ ++++ + + L+ L K GRV+ +++Y
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL----YCYNSLIFGLSKVGRVEESTKY 546
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + P Y+ L++G+ ++ +++ AE+ M + PN V Y L+E Y
Sbjct: 547 FAQMQE--RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604
Query: 155 CRLRRVDR-----------------------------------AIRLVKEMRKEGIEPNA 179
+ +++ A R++ + K G P+
Sbjct: 605 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 664
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VY+++I GL + E+ G+++ P +V Y +L+ G CK+GD+ A +
Sbjct: 665 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
++++G +P+ TY K G + +A LY +M+ +G TPD Y +L
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 784
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A+ + +EM RG + + L+ C+ K E ++ RGLVP+ LT +
Sbjct: 785 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843
Query: 360 LNDEFKKRG 368
+ + G
Sbjct: 844 IISGLSEAG 852
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 39/389 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI----LLDSLCKQGRVKA 90
T+ LI Y + G +E+A + + D+G ++ LL+S K ++
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQ--------RMLDTGLKPNDVIYIDLLESYFKSDDIEK 612
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
S F + LDQ R+Y IL++ S N++ A R + K P+V Y +L
Sbjct: 613 VSSTF--KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G C+ ++A ++ EM K+G++PN + YN +IDGL ++G + L
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 730
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P VTYTSL+ G CK GD+ A + M++ G P Y+ S G +E AM
Sbjct: 731 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 790
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M G+ +++ L+ CK K+ +++ + RG + T +I L
Sbjct: 791 LIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 849
Query: 331 RMYKFDEA-------------------SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM-T 370
K E S+ F DMI +G +P + + D K+ +
Sbjct: 850 EAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDK 909
Query: 371 ALAQKLCNVMSSVPRS----MELLDSRCK 395
AL + V S P + ++D+ C+
Sbjct: 910 ALMLRDVIVAKSAPMGCSSYLAIVDNLCR 938
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 150/337 (44%), Gaps = 29/337 (8%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ ILI + +G +EAA V + ++ L+ LCK + A F
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD----VHVYSSLISGLCKTADREKA---F 684
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
E+ + P + YN L++G +S ++ A + + + + PN VTY +L++G
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ + A L EM GI P+A VY+ + G AG E+ ++E + ++
Sbjct: 745 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL-RGHASI 803
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM----- 269
++ +LV G+CK G ++ K+L +++ RG +P+ T S+ GK+ +
Sbjct: 804 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 863
Query: 270 --------------NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+L+ MI G P + +++ CKE LD A+ + + +
Sbjct: 864 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALMLRDVIVAKSA 922
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ + ++ LCR K EA ++M +RG+ P
Sbjct: 923 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 110/281 (39%), Gaps = 54/281 (19%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K D + L+D LCK G + A F+ L + P Y L++G + ++
Sbjct: 693 KGVDPNIVCYNALIDGLCKSGDISYARNVFNSI--LAKGLVPNCVTYTSLIDGSCKVGDI 750
Query: 126 KDAERFWLEMRKENVTPN----------------------------------VVTYGTLV 151
+A + EM +TP+ + ++ LV
Sbjct: 751 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV 810
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G+C+ ++ ++L+ + G+ PNA+ +I GL EAG+ EV +
Sbjct: 811 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 870
Query: 212 PTMVTYTSL------------------VKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++SL ++ +CK G+L+ A + +++++ ++Y
Sbjct: 871 SAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYL 930
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ GK+ +A+NL ++M + G P ILL L
Sbjct: 931 AIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNL 971
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 152/344 (44%), Gaps = 38/344 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRK-ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ +L +LC++G A E + P Y +L+ + A
Sbjct: 80 YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
MR V +VVTYGTL+ G C VD+A+ L+ EM + GIEPN +VY++++ G ++G
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSG 199
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R+E+V + P +V YT L+ CK G + A ++ MM+ RG P+ TYN
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK--------------------- 292
K G V++A+ + +KM E G PD +TY+ L+K
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG 319
Query: 293 ----------------ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
LC ++ A QV M+ GC ++L T +LI L R++K
Sbjct: 320 KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR 379
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A ++M GL P T+ L F K A+ L + M
Sbjct: 380 KAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 176/375 (46%), Gaps = 22/375 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L A E D A L+ + P+ V + L++ Y ++G E F +
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVV---VYSSLLQGYCKSGRWEDVGKVFVEMS 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K + ++ L+DSLCK G+ K A + + P V YN+L+N
Sbjct: 213 E----KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM--VRRGLEPNVVTYNVLINCMC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPN 178
+ +VK+A +M ++ V P+VVTY TL++G + +D A+ L++EM K ++PN
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326
Query: 179 AIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGA 233
+ +N+VI GL + GR + V MME E G +VTY L+ G + + A
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMME-----ETGCMVNLVTYNLLIGGLLRVHKVRKA 381
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+++ M S G P TY+ + F K +V+ A +L M + G P+ Y LL
Sbjct: 382 MELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVA 441
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+C++ ++ A + EM +D+ + +IH C+ A + ++ GL P
Sbjct: 442 MCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500
Query: 354 YLTFKRLNDEFKKRG 368
+T+ + + F K G
Sbjct: 501 AVTYSIVINMFAKSG 515
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 160/352 (45%), Gaps = 41/352 (11%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWA-------PTVR---VYNILLNGWFRSKNVKDA 128
L L ++GR +AA+ + L A P+VR YN +L R + A
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 129 ERFWLEMRKE---NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
M E PN V+Y L+ C R D+A+ L++ MR G+ + + Y T+
Sbjct: 97 GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
I GL +A ++ +M CE G P +V Y+SL++GYCK+G E K+ M +
Sbjct: 157 IRGLCDAAEVDKAVELMGEM--CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK 214
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G P Y K GK + A + M+ G P+ +TY++L+ +CKE + A
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR-RGLV-PHYLTFK--- 358
I V K+M +G D+ T LI L + + DEA E+M+R + +V P+ +TF
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVI 334
Query: 359 -------RLNDEFKKRGMTALAQKLCNVMS------------SVPRSMELLD 391
R+ F+ R M + N+++ V ++MEL+D
Sbjct: 335 QGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 156/311 (50%), Gaps = 6/311 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC V A E + E P V VY+ LL G+ +S +D + ++E
Sbjct: 153 YGTLIRGLCDAAEVDKAVELMGEMCE--SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVE 210
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ + P+VV Y L++ C++ + +A ++ M + G+EPN + YN +I+ + + G
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG---FLPSPTT 251
+E G++++ P +VTY +L+KG +++ A +L+ M+ RG P+ T
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVT 329
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + G++ A + M E+G + +TY++L+ L + K+ A+++ EM
Sbjct: 330 FNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMT 389
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
G + D T ++LI C+M++ D A M RG+ P + L ++GM
Sbjct: 390 SLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449
Query: 372 LAQKLCNVMSS 382
A+ L N M +
Sbjct: 450 RARNLFNEMDN 460
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 16/295 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN---FDSGASLFEILLDSLCK 84
PD V+ +T LI+ + ++ A+W E +MV+ F ++ LC
Sbjct: 288 PDVVTYNT---LIKGLSDVLEMDEAMWLLE-----EMVRGKNIVKPNVVTFNSVIQGLCD 339
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
GR++ A F R ++++ V YN+L+ G R V+ A EM + P+
Sbjct: 340 IGRMRQA---FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
TY L++G+C++ +VDRA L+ MR GIEP Y ++ + E G E +
Sbjct: 397 SFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFN 456
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +V Y++++ G CKAGDL+ A ++LK ++ G P TY+ F+K G
Sbjct: 457 EMDNNFP-LDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSG 515
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+E A + ++M SG+ PD + L++ + +++ +++ +EM + +D
Sbjct: 516 DMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALD 570
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
++ L+ GM+E A F +N NF + ++ CK G +K A E
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEMDN-----NFPLDVVAYSTMIHGACKAGDLKTAKELL 489
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ P Y+I++N + +S +++ A +M P+V + +L++GY
Sbjct: 490 --KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+++ + L++EM + I ++ + +T+ LV +
Sbjct: 548 TKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 157/334 (47%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ Y + G +AA + + K + + +D+LC+ R +A Y
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMAS----KGIGVDVCTYNVFIDNLCRDSR--SAKGY 265
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++ P YN L++G+ R ++ A + + EM N+ PN +TY TL+ G+
Sbjct: 266 LLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGH 325
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + A+RL+ M G+ PN + Y +++GL + F VS ++ER + +
Sbjct: 326 CTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
++YT+++ G CK G LE A ++L M+ P T++ F + GK+ +A + K
Sbjct: 386 ISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCK 445
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M ++G P+ + Y L+ CK L A+ M G D T +L+ CR K
Sbjct: 446 MYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGK 505
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA M R GL P+ +TF + + + G
Sbjct: 506 LEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ILL++LC++G+ K A F RK + PT YN LLN + + K A +
Sbjct: 178 FNILLNALCERGKFKNAG--FLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDC 235
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + +V TY ++ CR R + L+K MR+ + PN I YNT+I G V G+
Sbjct: 236 MASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGK 295
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + + P +TY +L+ G+C G++ A +++ +M+S G P+ TY
Sbjct: 296 IEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGA 355
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + ++ +M G ++Y ++ LCK L+ A+Q+ +M
Sbjct: 356 LLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVS 415
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ D+ T ++LI+ R+ K + A M + GLVP+ + + L + K G
Sbjct: 416 VNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMG 469
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 17/370 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI--LLDSLCKQGRVKAAS 92
TF +I Y +G A F D + +F SLF LL LC G + A
Sbjct: 527 TFDCIINGYGNSGDALKAFSVF------DKMNSFGHFPSLFTYGGLLKGLCIGGHINEAL 580
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
++FH+ + + A ++N L RS N+ DA EM + P+ TY L+
Sbjct: 581 KFFHRLRCIPN--AVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIA 638
Query: 153 GYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
G C+ ++ A+ L K + K + PN VY +++DGL++ G + E L +
Sbjct: 639 GLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVE 698
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P V + ++ Y + G + IL M S+ + TYN ++K + L
Sbjct: 699 PDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFML 758
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
Y+ MI G+ PD+ ++H L+ C+ D+AI++ + + G ID T MLI C
Sbjct: 759 YKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCE 818
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRS-- 386
+ +A + M + ++P+ T+ L + + A ++ V+ SVP +
Sbjct: 819 RNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQ 878
Query: 387 -MELLDSRCK 395
+ L++ C+
Sbjct: 879 YITLINGMCR 888
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 144/344 (41%), Gaps = 38/344 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++D LCK G ++ A + L S P V +++L+NG+FR + +A+ +
Sbjct: 388 YTAMIDGLCKNGMLEEAVQLLDDM--LKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCK 445
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K + PN + Y TL+ YC++ + A+ M G + N ++ G+
Sbjct: 446 MYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGK 505
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY-- 252
EE M P VT+ ++ GY +GD A + M S G PS TY
Sbjct: 506 LEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGG 565
Query: 253 -----------NYFFRYFSKF----------------------GKVEDAMNLYRKMIESG 279
N ++F + G + DA+ L +M+ +
Sbjct: 566 LLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTND 625
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEA 338
+ PD TY L+ LCK+ K+ A+ +S + +G + T L+ L + A
Sbjct: 626 FLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAA 685
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
FE+M+ + + P + F + D++ ++G T+ + + M S
Sbjct: 686 LYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKS 729
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 37/335 (11%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+S ++F++L+ + V A + F+ + P+V N++L + + V
Sbjct: 102 NSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGF--RGLNPSVYTCNMVLGSLVKEQKVDMF 159
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
F+ M + + P+V T+ L+ C + A L+++M + G+ P A+ YNT+++
Sbjct: 160 WSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNW 219
Query: 189 LVEAGRFEEVSGMMERFL-------VCEPG----------------------------PT 213
+ GR++ S +++ VC P
Sbjct: 220 YCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPN 279
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+TY +L+ G+ + G +E A+K+ M LP+ TYN G + +A+ L
Sbjct: 280 EITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMD 339
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M+ G P+ +TY LL L K + + + + M+ G + + T +I LC+
Sbjct: 340 VMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNG 399
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA +DM++ + P +TF L + F + G
Sbjct: 400 MLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVG 434
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 41/365 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+ L+ + G AA++ FE N K+ + F +++D ++G+ ++
Sbjct: 668 VYTSLVDGLLKHGHARAALYIFEEMLN----KDVEPDTVAFNVIIDQYSRKGKTSKVNDI 723
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K ++ + YNILL+G+ + + + +M + P+ ++ +L+ GY
Sbjct: 724 LSTMKS--KNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781
Query: 155 CRLRRVDRAIR-----------------------------------LVKEMRKEGIEPNA 179
C+ + D AI+ LVK+M + + PN
Sbjct: 782 CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN + +GL+ F + +++ L PT Y +L+ G C+ G+++GA K+
Sbjct: 842 DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G + R + K+E+A+ + M+E P T+ L+ + CKE
Sbjct: 902 MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ A+++ M+ +D+ +LI LC + A +E+M +R L P+ +
Sbjct: 962 VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIV 1021
Query: 360 LNDEF 364
L D F
Sbjct: 1022 LIDSF 1026
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 142/310 (45%), Gaps = 6/310 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+++ L+D L K G +AA F + L++ P +N++++ + R
Sbjct: 667 AVYTSLVDGLLKHGHARAALYIFEEM--LNKDVEPDTVAFNVIIDQYSRKGKTSKVNDIL 724
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M+ +N+ N+ TY L+ GY + + R L K+M + G P+ ++++I G ++
Sbjct: 725 STMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS 784
Query: 193 GRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
F+ V+ + R++ E G + T+ L+ +C+ +++ A +++K M +P+
Sbjct: 785 KSFD-VAIKILRWITLE-GHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVD 842
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN F + A + + ++ESG P Y L+ +C+ + A+++ EM
Sbjct: 843 TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEM 902
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
K G + ++ L K + A + M+ ++P TF L + K
Sbjct: 903 KTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANV 962
Query: 371 ALAQKLCNVM 380
A A +L ++M
Sbjct: 963 AKALELRSIM 972
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 7/253 (2%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+N+L+ + +K A +M + V PNV TY L G R +A R+++ +
Sbjct: 809 FNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLL 868
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G P Y T+I+G+ G + + + V +++V+G + +E
Sbjct: 869 ESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIE 928
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A +L +M+ +P+ T+ + K V A+ L M D + Y++L+
Sbjct: 929 NAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLI 988
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC ++ A ++ +EMK R + +LI C E+ D+ R L+
Sbjct: 989 SGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELM 1048
Query: 352 PHYLTFKRLNDEF 364
RLN +F
Sbjct: 1049 -------RLNQQF 1054
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF--- 95
++R A + +E AIW + + ++ + F L+ CK+ V A E
Sbjct: 917 IVRGLANSKKIENAIWVLDLMLEMQIIPT----VATFTTLMHVYCKEANVAKALELRSIM 972
Query: 96 -HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H +LD V YN+L++G + +++ A + + EM++ ++ PN Y L++ +
Sbjct: 973 EHCHVKLD------VVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026
Query: 155 C 155
C
Sbjct: 1027 C 1027
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 166/310 (53%), Gaps = 16/310 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I++L +A + + A C+LLD G E +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEW----DEDMWVLMIDSYGKEGIVQESVKLFQKM 106
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
L + + S +LF+++L ++GR A YF+K L + PT +N+++ G+
Sbjct: 107 EELGVERTIKSYDALFKVIL----RRGRFMMAKRYFNKM--LSEGIEPTRHXFNVMIWGF 160
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F S V+ A RF+ +M+ ++P+V+TY T++ GY R++++D A + EM+ IEP
Sbjct: 161 FLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTV 220
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y T+I G V + ++ ++E P +TY++L+ G C A + A ILK
Sbjct: 221 VTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKE 280
Query: 240 MISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M+ + +PT + F R S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 281 MVDKYM--APTDNSIFXRLISSQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCK 338
Query: 297 EDKLDLAIQV 306
+ D A+++
Sbjct: 339 AGQHDKAVKL 348
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P ++TY +++ GY + ++ A
Sbjct: 145 GIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCKTGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKAGQHDKAVKLLD 350
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GRF + L PT + ++ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+++A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAP 288
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ +N F GKVE A + M +PD +TY+
Sbjct: 130 RFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K+D A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRSM--ELLDSRCK 395
G+ P+ +T+ L N E + L + + M+ S+ L+ S+CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCK 303
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 133/295 (45%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ D A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMDEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GYGIKPN----AITYSTLLPGLCNAEKMSEARSIL--KEMVDKYMAPTDNSIFXRLISSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHMEPSA--YNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPD 472
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 20/386 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K A+ L I PD V TF LI + G +E A F
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVV---TFSALIYGFCIVGQLEEAFGLFR--- 267
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+MV KN + F IL+D+LCK+G +K A + + P V Y+ L++G+
Sbjct: 268 --EMVLKNINPDYYTFNILVDALCKEGNLKGAKNML--VVMMKEGVMPNVVTYSSLMDGY 323
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
V A+ + + PN +Y T++ G+C+++ VD A+ L +M+ +GI P+
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDK 383
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN++IDGL ++GR +++ + TY L+ CK ++ A ++K
Sbjct: 384 VTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKK 443
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P T+N K G++++A ++++ ++ GY+ + TY+I++ LCKE
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGL 503
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG---------L 350
D A + +M G D T LI L + ++A +MI R +
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEM 563
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
V H + + ++F K+G A+ L
Sbjct: 564 VLHLESEAKDQEKFGKKGYYAITTNL 589
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 155/328 (47%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ C + A + K L + P +N L+ G + VK+A F
Sbjct: 106 FNILINCYCHMAEMNFA--FSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDH 163
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + +YGTL+ G C++ A+++++++ + ++ N ++YNT+ID L +
Sbjct: 164 VLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKL 223
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + + + P +VT+++L+ G+C G LE A + + M+ + P T+N
Sbjct: 224 VIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNI 283
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G ++ A N+ M++ G P+ +TY L+ C ++++ A V + G
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + +I+ C++ DEA + F DM +G+ P +T+ L D K G + A
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAW 403
Query: 375 KLCNVMSSVPRSME------LLDSRCKD 396
+L + M + L+D+ CK+
Sbjct: 404 ELVDEMHDNGQPANIFTYNCLIDALCKN 431
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 4/281 (1%)
Query: 107 PTVRV--YNILLNGWFRSKNVKDAERFWLEMRKE--NVTPNVVTYGTLVEGYCRLRRVDR 162
PT + +N +L +S N L R E +TP++ T+ L+ YC + ++
Sbjct: 62 PTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNF 121
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A ++ ++ K G EP+ I +NT+I GL G+ +E + L +Y +L+
Sbjct: 122 AFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLIN 181
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CK G+ A ++L+ + + + YN K V DA LY +MI +P
Sbjct: 182 GLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISP 241
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +T+ L+ C +L+ A + +EM + + D T +L+ LC+ A
Sbjct: 242 DVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNML 301
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
M++ G++P+ +T+ L D + A+ + N +S +
Sbjct: 302 VVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM 342
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 109/278 (39%), Gaps = 43/278 (15%)
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG--RFEEVSGMMERFLVCEPGPTMVTY 217
VD + + + + I +N ++ LV++ + + R P + T+
Sbjct: 47 VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
L+ YC ++ A ++ ++ G+ P T+N + GKV++A++ + ++
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSK----------------------------- 308
G+ D+ +Y L+ LCK + A+Q+ +
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226
Query: 309 ------EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+M + D+ T + LI+ C + + +EA F +M+ + + P Y TF L D
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 363 EFKKRGMTALAQKLC------NVMSSVPRSMELLDSRC 394
K G A+ + VM +V L+D C
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 152/344 (44%), Gaps = 38/344 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRK-ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ +L +LC++G A E + P Y +L+ + A
Sbjct: 80 YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
MR V +VVTYGTL+ G C VD+A+ L+ EM + GIEPN +VY++++ G ++G
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSG 199
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R+E+V + P +V YT L+ CK G + A ++ MM+ RG P+ TYN
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK--------------------- 292
K G V++A+ + +KM E G PD +TY+ L+K
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG 319
Query: 293 ----------------ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
LC ++ A QV M+ GC ++L T +LI L R++K
Sbjct: 320 KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR 379
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A ++M GL P T+ L F K A+ L + M
Sbjct: 380 KAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 184/392 (46%), Gaps = 28/392 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFA 59
+I+ L A E D A L+ + P+ V + L++ Y ++G E F E +
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVV---VYSSLLQGYCKSGRWEDVGKVFVEMS 212
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILLN 117
K + ++ L+DSLCK G+ K A R+ L+ P V YN+L+N
Sbjct: 213 E-----KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE----PNVVTYNVLIN 263
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGI 175
+ +VK+A +M ++ V P+VVTY TL++G + +D A+ L++EM K +
Sbjct: 264 CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIV 323
Query: 176 EPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDL 230
+PN + +N+VI GL + GR + V MME E G +VTY L+ G + +
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMME-----ETGCMVNLVTYNLLIGGLLRVHKV 378
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A +++ M S G P TY+ + F K +V+ A +L M + G P+ Y L
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPL 438
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L +C++ ++ A + EM +D+ + +IH C+ A + ++ GL
Sbjct: 439 LVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
P +T+ + + F K G A + M++
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 147/317 (46%), Gaps = 34/317 (10%)
Query: 107 PTVR---VYNILLNGWFRSKNVKDAERFWLEMRKE---NVTPNVVTYGTLVEGYCRLRRV 160
P+VR YN +L R + A M E PN V+Y L+ C R
Sbjct: 72 PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYT 218
D+A+ L++ MR G+ + + Y T+I GL +A ++ +M CE G P +V Y+
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM--CESGIEPNVVVYS 189
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL++GYCK+G E K+ M +G P Y K GK + A + M+
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ +TY++L+ +CKE + AI V K+M +G D+ T LI L + + DEA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309
Query: 339 SAEFEDMIR-RGLV-PHYLTFK----------RLNDEFKKRGMTALAQKLCNVMS----- 381
E+M+R + +V P+ +TF R+ F+ R M + N+++
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369
Query: 382 -------SVPRSMELLD 391
V ++MEL+D
Sbjct: 370 GGLLRVHKVRKAMELMD 386
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 16/295 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN---FDSGASLFEILLDSLCK 84
PD V+ +T LI+ + ++ A+W E +MV+ F ++ LC
Sbjct: 288 PDVVTYNT---LIKGLSDVLEMDEAMWLLE-----EMVRGKNIVKPNVVTFNSVIQGLCD 339
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
GR++ A F R ++++ V YN+L+ G R V+ A EM + P+
Sbjct: 340 IGRMRQA---FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
TY L++G+C++ +VDRA L+ MR GIEP Y ++ + E G E +
Sbjct: 397 SFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFN 456
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +V Y++++ G CKAGDL+ A ++LK ++ G P TY+ F+K G
Sbjct: 457 EMDNNFP-LDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSG 515
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+E A + ++M SG+ PD + L++ + +++ +++ +EM + +D
Sbjct: 516 DMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALD 570
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
++ L+ GM+E A F +M NF + ++ CK G +K A E
Sbjct: 435 YIPLLVAMCEQGMMERARNLFN-----EMDNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ P Y+I++N + +S +++ A +M P+V + +L++GY
Sbjct: 490 --KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+++ + L++EM + I ++ + +T+ LV +
Sbjct: 548 TKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 64 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLRYFKLVWGFY 119
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A + + K + P+VV+Y TL+ GY
Sbjct: 120 --EEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYI 177
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL MR G++P+ Y+ +I+GL + ++ + + + LV P V
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G + A L +M
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 357
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 358 XDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 403
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 133 FFNILMHRFCKDGDIRVAPLVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 188
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
MR V P+V TY L+ G C+ +D A L EM +G+ PN + + T+IDG +
Sbjct: 189 KSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCK 248
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +LV G CK GDL A ++ M +G P T
Sbjct: 249 NGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFT 308
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 309 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREML 368
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 369 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVL 417
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 2/218 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ + A+E F + L + P + L++G ++ V A + +
Sbjct: 204 YSVLINGLCKESXMDDANELFDEM--LVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQ 261
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+++TY TLV G C+ +++A L+ EM +G++P+ Y T+IDG + G
Sbjct: 262 MLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGD 321
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +R + V YT+L+ G C+ G A K+L+ M+S G P TY
Sbjct: 322 LDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTM 381
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
F K G V L ++M +G+ P +TY++L+
Sbjct: 382 IINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMN 419
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 47 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRK---V 102
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + + K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 103 LEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGL 162
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G +E + P + TY+ L+ G CK ++ A++
Sbjct: 163 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANE 222
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LC
Sbjct: 223 LFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLC 282
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L+ A + EM +G D T T LI C+ D A + MI+ + +
Sbjct: 283 KKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDV 342
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 343 AYTALISGLCQEGRSXDAEKMLREMLSV 370
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + AA E H+++ + ++ Y L++G + DAE+ E
Sbjct: 309 YTTLIDGCCKEGDLDAAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLRE 366
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM++ G P + YN +++G
Sbjct: 367 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 148/306 (48%), Gaps = 9/306 (2%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVR 110
+W F + ++L+ + + F IL+ CK+G +K A F + W PT
Sbjct: 120 VWGF-YEDSLEC--GYPASLYFFNILMHRFCKEGEIKLAQSVF----DAITKWGLRPTAV 172
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ R ++ + R M+ V P+V TY L+ G C+ ++D A L EM
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEM 232
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ PN + + T+IDG + GR + + ++ L P ++TY +L+ G CK GDL
Sbjct: 233 LDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++ M +G P TY K G +E A ++MI+ D + Y L
Sbjct: 293 KQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 412
Query: 351 VPHYLT 356
VP +T
Sbjct: 413 VPSVVT 418
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 160/346 (46%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
L+ + ++ +NIL++ + + +K A+ + + K + P V++ TL+ GY
Sbjct: 125 ED--SLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M+ G++P+ Y+ +I+GL + + + + + L P V
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 303 SMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ +C+ + A + + K G+ P A+ +NT+++G + G +E +
Sbjct: 139 FNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQ 198
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + TY+ L+ G CK ++ A+++ M+ G +P+ T+ K G+V+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLI 318
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
C+ + A + MI+ + + + L + G + A+K+ M SV
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 80/209 (38%), Gaps = 35/209 (16%)
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
++ L+ Y ++G L A + ++ F T + K + Y +
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSL 128
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQV------------------------------ 306
E GY ++IL+ CKE ++ LA V
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLD 188
Query: 307 -----SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
M+ G D+ T ++LI+ LC+ K D A+ F +M+ GLVP+ +TF L
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLI 248
Query: 362 DEFKKRGMTALAQKLCNVMSSVPRSMELL 390
D K G LA ++ M S S +L+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLI 277
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 8/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ IL+ Y + G E A + F+ MV +N + I ++ LCK GR A +
Sbjct: 525 TYSILMDGYFKNGDTEYAFYVFD-----RMVDENIVPSDFTYNIKINGLCKVGRTSEAQD 579
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+K +++ + P YN +++G+ + +V A + EM + V+PNV+TY TL+ G
Sbjct: 580 ML--KKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C+ D A+++ EMR +G+E + Y +IDG + E S + L P
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPN 697
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
V Y SL+ GY ++E A + K M+ G TY K G++ A++LY
Sbjct: 698 SVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYS 757
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G PD + Y +L+ LC + +L+ A ++ EM+ ++ LI +
Sbjct: 758 EMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAG 817
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA +M+ +GL P+ T+ L + K G +AL L
Sbjct: 818 NLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLL 860
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 36/320 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF--- 131
+ +L++ CK G + A + + + K +++ PTV + N L+ G+ + ++ ++A +
Sbjct: 387 YAVLIEWCCKNGNMAKAYDLYTQMK--NKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444
Query: 132 -------------------------------WLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
W +M + + P V+Y +++ G+CR +
Sbjct: 445 AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNL 504
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A + +M G++PN I Y+ ++DG + G E + +R + P+ TY
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK G A +LK + +GF+P TYN F K G V A+ YR+M ESG
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
+P+ +TY L+ CK + DLA+++ EM+ +G ++D+ LI C+ + AS
Sbjct: 625 SPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASW 684
Query: 341 EFEDMIRRGLVPHYLTFKRL 360
F +++ GL P+ + + L
Sbjct: 685 LFSELLDGGLSPNSVIYNSL 704
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 151/369 (40%), Gaps = 40/369 (10%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L+ Y +A + AI F D+V LL +L K + A E + K
Sbjct: 180 LLNSYIKANKLNDAIGCFNRLVESDIV----PWIKFLNFLLTALVKNDMIYEAREVYEKM 235
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
L V+ I++ + N ++A++F+LE + V + Y +++ +C+
Sbjct: 236 V-LKGVHGDCFTVH-IMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNL 293
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
V+ A L+K+MR +G P+ + +VI V+ G E + + + C +V T
Sbjct: 294 DVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVAT 353
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+LVKGYCK L A + M G P+ TY + K G + A +LY +M
Sbjct: 354 TLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNK 413
Query: 279 GYTP----------------------------------DRLTYHILLKILCKEDKLDLAI 304
P + TY+ LL LCKE K+ A
Sbjct: 414 NICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEAT 473
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ ++M +G + +I CR D A++ F DM+ GL P+ +T+ L D +
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533
Query: 365 KKRGMTALA 373
K G T A
Sbjct: 534 FKNGDTEYA 542
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 113/268 (42%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
+R+YN LLN + ++ + DA + + + ++ P + L+ + + A + +
Sbjct: 174 IRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYE 233
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M +G+ + + ++ ++ EE Y+ +++ +CK
Sbjct: 234 KMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNL 293
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
D+E A +LK M +G++PS T+ K G + +A+ L +M+ G + +
Sbjct: 294 DVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVAT 353
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+K CK+DKL A++ +M G + T +LI C+ +A + M +
Sbjct: 354 TLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNK 413
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ P L F K A KL
Sbjct: 414 NICPTVFIVNSLIRGFLKVESREEASKL 441
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y L+ Y KA L A ++ +P N+ K + +A +Y KM+
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G D T HI+++ K++ + A + E K RG +D +++I C+ +
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELL 390
A +DM +G VP TF + K+G A +L C V +V + L+
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356
Query: 391 DSRCK 395
CK
Sbjct: 357 KGYCK 361
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%)
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ F ++ + ++ Y L+ Y + +++ AI + + I P N ++
Sbjct: 159 DHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTA 218
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
LV+ E + E+ ++ T +++ K + E A K SRG
Sbjct: 219 LVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLD 278
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
Y+ + F K VE A L + M + G+ P T+ ++ K+ + A+++
Sbjct: 279 AAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EM G +++ +T L+ C+ K A F+ M G P+ +T+ L + K G
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398
Query: 369 MTALAQKLCNVMSS 382
A A L M +
Sbjct: 399 NMAKAYDLYTQMKN 412
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 162/328 (49%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D K G ++ + F++ K D P + YN L+N + + + + A ++ E
Sbjct: 327 YNSLIDGYGKVGSLEEVASLFNEMK--DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSE 384
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + PNVVTY TL++ +C+ + AI+L +MR+ G+ PN Y ++ID +AG
Sbjct: 385 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGN 444
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ L +VTYT+L+ G CKAG + A ++ + M+ G P+ Y
Sbjct: 445 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 504
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K ++EDAM + ++M E PD + Y ++ C + KL+ + +EMK RG
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA- 373
+ ST +I + K +A F++M G+ +T+ L D K G+ LA
Sbjct: 565 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAV 624
Query: 374 QKLCNVMS-----SVPRSMELLDSRCKD 396
C ++S +V L+D CK+
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKN 652
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LLD LCK GR+ A E F R L +P +VY L++G+ +++ ++DA + +
Sbjct: 467 YTALLDGLCKAGRMIEAEEVF--RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 524
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N+ P+++ YG+++ G+C R+++ +++EM+ GI N ++ T+ID +AG+
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + T+VTY L+ G CKAG +E A M+S G P+ Y
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTS 644
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K +E A L+ +M G TPD + L+ K L A+ + M
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ DL T L+ + + +A F +MI +G++P + L E+ KRG A
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764
Query: 375 KLCNVM 380
+L N M
Sbjct: 765 ELKNEM 770
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 11/364 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFANNLDMVKNFDSGASLFEILLDSLCKQ 85
VPD + T+ LI Y + + A F E NN + L+D+ CK+
Sbjct: 356 VPDII---TYNGLINCYCKFEKMPRAFEYFSEMKNN-----GLKPNVVTYSTLIDAFCKE 407
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G ++ A + F + P Y L++ ++ N+ +A + +M + V N+V
Sbjct: 408 GMMQGAIKLFVDMRR--TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 465
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L++G C+ R+ A + + M K+GI PN VY ++ G ++A R E+ ++++
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
C P ++ Y S++ G+C LE IL+ M SRG +P + K GK
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA+N +++M + G +TY +L+ LCK ++LA+ M G ++ T L
Sbjct: 586 SDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSL 645
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
I LC+ + A F++M RG+ P F L D K G A L + M+ +
Sbjct: 646 IDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 705
Query: 386 SMEL 389
+L
Sbjct: 706 EFDL 709
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 143/291 (49%), Gaps = 2/291 (0%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
SG+ +F++L + G ++ A+E F + + P R N LL+ +S N +
Sbjct: 217 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRT--LPKARSCNFLLHRLSKSGNGQLVR 274
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+F+ +M + P+V TY +++ C+ ++ + RL +MR+ G+ P+ + YN++IDG
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G EEV+ + P ++TY L+ YCK + A + M + G P+
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ F K G ++ A+ L+ M +G P+ TY L+ CK L A ++ +
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M G +++ T T L+ LC+ + EA F M++ G+ P+ + L
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 505
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++D+ K G+ A +F + + D T+ Y +L++G ++ V+ A ++ M
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQ--DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ PNV Y +L++G C+ ++ A +L EM+ G+ P+ + +IDG ++ G +E
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 692
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++ R + YTSLV G+ + G+L A K MI +G LP R
Sbjct: 693 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ K G++++A+ L +M G + T
Sbjct: 753 EYYKRGQLDEAIELKNEMERMGLITESAT 781
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 37/309 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKQGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDS----LCKQ---------------------------GRVK 89
L + + S +LF+++L + K+ G+V+
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVE 167
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A+ +F K + S P V YN ++NG++R K ++AE++++EM+ N+ P VVTY T
Sbjct: 168 TANRFFEDMKSREIS--PDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTT 225
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E +++ +
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKY 285
Query: 210 PGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
PT + L+ CK+G+L+ AS +LK MI Y F K G+ + A
Sbjct: 286 LAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQA 345
Query: 269 MNLYRKMIE 277
+ L K+IE
Sbjct: 346 VKLLDKLIE 354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP + +I G +G+ E + E E P +VTY +++ GY + E A
Sbjct: 145 GIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ + Y LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D AS + MIR +
Sbjct: 265 LCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKAGQYDQAVKLLD 350
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 108/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ L+ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + + L+ LC K EA + ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAP 288
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 29/308 (9%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKXEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L+
Sbjct: 248 GFGIKPN----AIXYSTLLPGLCNAEKMSEARSIL--KEMMDKYLAPTDNSIFMRLITSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL---VCEPGPTMVTYTSLVKGYCK 226
EP+A YN +I+ L G+ + ++ + L V +P +L++G+ +
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAAKAETLVRQLLKWGVQDP----TALNTLIRGHSQ 415
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++LK+M+ R + Y+ + + K + DA MIE+ + PD
Sbjct: 416 EGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSAL 475
Query: 287 YHILLKIL 294
+ +++ L
Sbjct: 476 FRSVMESL 483
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+ F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K + A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ + + L N E + L + + ++ S M L+ S+CK
Sbjct: 250 GIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCK 303
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 157/307 (51%), Gaps = 9/307 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G ++ AI N ++K + + IL+D+LCK+G+VK A
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLL----NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
L P V Y+ L++G+F VK A+ + M VTP+V TY L+ G+
Sbjct: 292 L--AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + VD A+ L KEM ++ + P + Y+++IDGL ++GR V +++ +
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANV 409
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY+SL+ G CK G L+ A + M +G P+ T+ K G+++DA +++
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++ GY + TY++++ CK+ L+ A+ + +M+ GC D T ++I ++K
Sbjct: 470 LLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII---IALFK 526
Query: 335 FDEASAE 341
DE
Sbjct: 527 KDENGGN 533
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 171/350 (48%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI+ G V+ A+ F + L + + F + L++ +CK G
Sbjct: 127 PDTVTLNT---LIKGLCLKGQVKKAL---HFHDKL-LAQGFQLNQVSYGTLINGVCKIGD 179
Query: 88 VKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+AA + K +D P V +Y+ +++ + + V +A + EM + ++ +VVT
Sbjct: 180 TRAAIKLLQK---IDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G+C ++ AI L+ EM + I PN YN ++D L + G+ +E ++ L
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++TY++L+ GY +++ A + M G P TY F K V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A+NL+++M + P +TY L+ LCK ++ + EM RG ++ T + LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLI 416
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ D A A F M +G+ P+ TF L D K G AQ++
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 466
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 167/375 (44%), Gaps = 17/375 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQG 86
PD + T ILI + G + TF F+ ++K + L+ LC +G
Sbjct: 92 PDLI---TLNILINCFCHMGQI-----TFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+VK A +FH K L Q + Y L+NG + + + A + ++ PNVV
Sbjct: 144 QVKKAL-HFHD-KLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVM 201
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T+++ C+ + V A L EM +GI + + Y+T+I G G+ +E G++ +
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + TY LV CK G ++ A +L +M+ P TY+ + +V+
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A +++ M G TPD TY IL+ CK +D A+ + KEM + + T + LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV--- 383
LC+ + ++M RG + +T+ L D K G A L N M
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Query: 384 PRSME---LLDSRCK 395
P + LLD CK
Sbjct: 442 PNTFTFTILLDGLCK 456
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 10/342 (2%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LL KI G P+ V T + + +Y +V A F VK + +
Sbjct: 186 LLQKIDGRLTKPNVVMYSTIIDALCKYQ---LVSEAYGLFSEMT----VKGISADVVTYS 238
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L+ C +G++K A ++ + ++ P V YNIL++ + VK+A+ M
Sbjct: 239 TLIYGFCIEGKLKEAIGLLNEM--VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
K V P+V+TY TL++GY + V +A + M G+ P+ Y +I+G + +
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + + P +VTY+SL+ G CK+G + ++ M RG + TY+
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLI 416
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G ++ A+ L+ KM + G P+ T+ ILL LCK +L A +V +++ +G
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+++ T ++I C+ +EA M G +P +TF+
Sbjct: 477 LNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFE 518
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 135/297 (45%), Gaps = 6/297 (2%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + +N +L+ + + K+ A + + + P+++T L+ +C + ++
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
++ ++ K G P+ + NT+I GL G+ ++ ++ L V+Y +L+ G C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVC 175
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K GD A K+L+ + R P+ Y+ K+ V +A L+ +M G + D +
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ C E KL AI + EM + + ++ T +L+ LC+ K EA + M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 346 IRRGLVPHYLTFKRLND------EFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
++ + P +T+ L D E KK A L V V L++ CK+
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ C G++ K L + + P + L+NG V A F +
Sbjct: 964 LNILINCFCHMGQITFNFSIL--AKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDK 1021
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + N V+YGTL+ G C++ AI+L++++ +P+ ++YNT+ID L +
Sbjct: 1022 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQL 1081
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ G+ V +VTY +L+ G+C G L+ A +L M+ + P+ TYN
Sbjct: 1082 VSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNI 1141
Query: 255 FFRYFSKFGK--VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
K GK +++++++ KM ++G + +T+ I++ L ++D+ D ++ EM
Sbjct: 1142 LVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIA 1201
Query: 313 RG 314
RG
Sbjct: 1202 RG 1203
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + NIL+N + + ++ K P+ +T+ TL+ G C +V++A+
Sbjct: 959 PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++ +G + N + Y T+I+G+ + G ++ + P +V Y +++ CK
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A + M +G TYN F GK+++A+ L KM+ P+ T
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138
Query: 287 YHILLKILCKEDK--LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
Y+IL+ LCKE K LD ++ + +M+ GC + T ++I L + D+ +
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHE 1198
Query: 345 MIRRGLV 351
MI RGL+
Sbjct: 1199 MIARGLL 1205
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 115/258 (44%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+NV DA + M TP ++ + +++ + +++ A+ L + +GI+P+ I
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N +I+ G+ ++ + L P VT +L+KG C G ++ A +++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+GF + +Y K G A+ L +K+ P+ + Y ++ LCK +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + EM +G D+ T + LI+ C K EA +M+ + + P+ T+ L D
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 363 EFKKRGMTALAQKLCNVM 380
K G A+ + VM
Sbjct: 278 ALCKEGKVKEAKSVLAVM 295
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 149 TLVEGYCR-----LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
T V Y R ++ A+ L + +GI+P+ N +I+ G+ ++
Sbjct: 926 TSVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILA 985
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L P +T+T+L+ G C G + A ++++GF + +Y K G
Sbjct: 986 KILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIG 1045
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
A+ L RK+ PD + Y+ ++ LCK + A + EM +G D+ T
Sbjct: 1046 DTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYN 1105
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
LI+ C + K EA M+ + + P+ T+ L D K G L + L S+
Sbjct: 1106 TLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESL-----SM 1160
Query: 384 PRSMELLDSRCK 395
ME D+ CK
Sbjct: 1161 LSKME--DNGCK 1170
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 6/246 (2%)
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT 216
++ VD A+ M P I +N ++D + + + R + P ++T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
L+ +C G + +L ++ RG+ P T N + G+V+ A++ + K++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
G+ ++++Y L+ +CK AI++ +++ R ++ + +I LC+
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELL 390
EA F +M +G+ +T+ L F G A L N M +V L+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 391 DSRCKD 396
D+ CK+
Sbjct: 277 DALCKE 282
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%)
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
+++++F V+DA++ + +M+ +TP + ++ +L K A+ +S
Sbjct: 25 SSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHR 84
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ +G DL T +LI+ C M + + +++RG P +T L
Sbjct: 85 LELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 40/353 (11%)
Query: 69 DSG---ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
DSG ++ ++L+D+ K GRV+ A+E + D+ AP++R N LL R+ +
Sbjct: 41 DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMR--DRGLAPSIRCCNALLKDLLRADAM 98
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ M ++P+V TY TL+E YC++R D A +++ EMR+ G N + YN +
Sbjct: 99 ALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL 158
Query: 186 IDGLVEAGRFEEVSG-----------------------------------MMERFLVCEP 210
I GL +G EE G +++ E
Sbjct: 159 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 218
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +V Y +L+ G+ + G+ + A K++K M++ G P+ TY+ R K G+++ A
Sbjct: 219 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 278
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L ++M+ + PD +TY+++++ + A ++ EM+ G ++ T +++IH LC
Sbjct: 279 LLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 338
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ + ++AS E+M +GL P+ + L + + G +LA ++ + M+ V
Sbjct: 339 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 391
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 169/366 (46%), Gaps = 51/366 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
++ L+ LCK G++ AS ++ + S P YN+++ G FR N KDA R E
Sbjct: 260 YDNLVRGLCKMGQMDRASLLL--KQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSE 317
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV------------- 181
M ++PNV TY ++ G C+ ++A L++EM +G++PNA V
Sbjct: 318 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 377
Query: 182 ----------------------YNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMV 215
YN++I GL + GR EE + M ER L+ P
Sbjct: 378 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL----PNEF 433
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY+ L+ GY K GDLE A ++++ M+ G P+ Y + K +E + ++ M
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
++ G D Y IL+ L ++ A +V E++ G D+ + LI LC+
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---EL 389
++A ++M ++G+ P+ + + L D K G + A+ + N + + VP + L
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613
Query: 390 LDSRCK 395
+D CK
Sbjct: 614 IDGSCK 619
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 172/380 (45%), Gaps = 9/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L K + D A LL + PD + T+ ++I + R + A
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTI---TYNLIIEGHFRHHNKKDAFRLLSEME 319
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + N + + I++ LC+ G + AS+ + + P VY L++G+
Sbjct: 320 NAGISPNVYT----YSIMIHGLCQSGEPEKASDLLEEMTT--KGLKPNAFVYAPLISGYC 373
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R NV A + +M K NV P++ Y +L+ G ++ RV+ + + +M++ G+ PN
Sbjct: 374 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 433
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I G ++ G E +++R L P V Y L++ Y K+ D+E S K M
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G + Y S G +E A + ++ ++G PD Y L+ LCK
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A + EM +G D ++ LI LC+ A F ++ +GLVP+ +T+ L
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613
Query: 361 NDEFKKRGMTALAQKLCNVM 380
D K G + A L N M
Sbjct: 614 IDGSCKVGDISNAFYLYNEM 633
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 43/357 (12%)
Query: 65 VKNFDSGASL------FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
V+ F GA + + L+++ CK A + + +E + YN+L+ G
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE--RGCGLNTVTYNVLIAG 161
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
RS V++A F +M + P+ TYG L+ G C+ RR + A L+ EM ++PN
Sbjct: 162 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 221
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+VY +IDG + G +E M++ + P +TY +LV+G CK G ++ AS +LK
Sbjct: 222 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 281
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ P TYN + +DA L +M +G +P+ TY I++ LC+
Sbjct: 282 QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 341
Query: 299 KLDLAIQVSKEMKCRG------------------------CDI-----------DLDTST 323
+ + A + +EM +G C+I DL
Sbjct: 342 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 401
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LI L ++ + +E++ F M RGL+P+ T+ L + K G A++L M
Sbjct: 402 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 164/369 (44%), Gaps = 42/369 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+ LI Y R G V A F+ ++++ + + L+ L K GRV+ +++Y
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL----YCYNSLIFGLSKVGRVEESTKY 419
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + P Y+ L++G+ ++ +++ AE+ M + PN V Y L+E Y
Sbjct: 420 FAQMQE--RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477
Query: 155 CRLRRVDR-----------------------------------AIRLVKEMRKEGIEPNA 179
+ +++ A R++ E+ K G P+
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV 537
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
VY+++I GL + E+ G+++ P +V Y +L+ G CK+GD+ A +
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
++++G +P+ TY K G + +A LY +M+ +G TPD Y +L
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L+ A+ + +EM RG + + L+ C+ K E ++ RGLVP+ LT +
Sbjct: 658 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 716
Query: 360 LNDEFKKRG 368
+ + G
Sbjct: 717 IISGLSEAG 725
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 169/389 (43%), Gaps = 39/389 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI----LLDSLCKQGRVKA 90
T+ LI Y + G +E+A + + D+G ++ LL+S K ++
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQ--------RMLDTGLKPNDVIYIDLLESYFKSDDIEK 485
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
S F + LDQ R+Y IL++ S N++ A R E+ K P+V Y +L
Sbjct: 486 VSSTF--KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G C+ ++A ++ EM K+G++PN + YN +IDGL ++G + L
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 603
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P VTYTSL+ G CK GD+ A + M++ G P Y+ S G +E AM
Sbjct: 604 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 663
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M G+ +++ L+ CK K+ +++ + RG + T +I L
Sbjct: 664 LIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 722
Query: 331 RMYKFDEA-------------------SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM-T 370
K E S+ F DMI +G +P + + D K+ +
Sbjct: 723 EAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDK 782
Query: 371 ALAQKLCNVMSSVPRS----MELLDSRCK 395
AL + V S P + ++D+ C+
Sbjct: 783 ALMLRDVIVAKSAPMGCSSYLAIVDNLCR 811
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 29/334 (8%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ ILI + +G +EAA V + ++ L+ LCK + A F
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPD----VHVYSSLISGLCKTADREKA---F 557
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
E+ + P + YN L++G +S ++ A + + + + PN VTY +L++G
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ + A L EM GI P+A VY+ + G AG E+ ++E + ++
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL-RGHASI 676
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM----- 269
++ +LV G+CK G ++ K+L +++ RG +P+ T S+ GK+ +
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736
Query: 270 --------------NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+L+ MI G P + +++ CKE LD A+ + + +
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALMLRDVIVAKSA 795
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ + ++ LCR K EA ++M +RG
Sbjct: 796 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 9/347 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PDF+ + ILI + G V+ A +E + + + F + +LL L K G
Sbjct: 444 PDFI---VYSILIHGLCKEGFVQRAYQLYE---QMRLKRKFPHHFAQRAVLL-GLFKNGN 496
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A YF +D V +YNI+++G+ R + +A + + +M + +TP+VVT+
Sbjct: 497 ISEARNYFDTWTRMD--LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+CR + A ++++ +R +G+ P+ + Y T+++ E G +E+ +
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEA 614
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
PT VTYT L+KG C+ + + ++L+ M ++G LP TYN + F K ++
Sbjct: 615 NAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITK 674
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ LY M+ P ++TY +L+ LC L ++ ++ R + T +I
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIK 734
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C + +A F M+ +G V + + + KRG+ A+
Sbjct: 735 AHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAK 781
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 167/361 (46%), Gaps = 44/361 (12%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
IL+ LC+Q +++ A + H ++ P++ N +++ + + + A F+ M
Sbjct: 241 SILIHGLCEQSKLEDAISFLHDSNKV---VGPSIVSINTIMSKFCKVGLIDVARSFFCLM 297
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
K + + +Y L+ G C +D A+ +M K G+EP+ + YNT+ G + G
Sbjct: 298 VKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLM 357
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
++++ L+ P +VTYT+L+ G+C+ G++E A K+ + +SRGF + YN
Sbjct: 358 SGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNML 417
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG- 314
K G++E+A+ L+ +M PD + Y IL+ LCKE + A Q+ ++M+ +
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477
Query: 315 ------------------------------CDIDLDTSTMLIHLL----CRMYKFDEASA 340
+DL +L +++ R+ EA
Sbjct: 478 FPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRC 394
+ MI RG+ P +TF L + F +RG A+K+ V+ SV L+++ C
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597
Query: 395 K 395
+
Sbjct: 598 E 598
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 55/400 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLD--KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L + + + A L D K+ G P VS +T ++ ++ + G+++ A F
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKVVG---PSIVSINT---IMSKFCKVGLIDVARSFFCL 296
Query: 59 ANNLDMVKN---FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
MVKN DS + + ILL LC G + A + ++ P V YN L
Sbjct: 297 -----MVKNGLLHDSFS--YNILLHGLCVAGSMDEALGFTDDMEK--HGVEPDVVTYNTL 347
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
G+ + A + +M + + P++VTY TL+ G+C++ ++ A++L +E G
Sbjct: 348 AKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF 407
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
+ N I YN ++ L + GR EE + + P + Y+ L+ G CK G ++ A +
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467
Query: 236 ILKMM-ISRGF----------------------------------LPSPTTYNYFFRYFS 260
+ + M + R F + YN +
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ + +AM LY KMIE G TP +T++ L+ C+ L A ++ + ++ +G +
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T T L++ C + E +M +VP ++T+ L
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVL 627
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 12/314 (3%)
Query: 43 YARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD 102
Y+R M+ A++ +L NF + + LL ++ + + E+
Sbjct: 180 YSRHEMIHDALFVIAKMKDL----NFQASVPTYNSLLHNM------RHTDIMWDVYNEIK 229
Query: 103 QSWAPTVR-VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
S AP +IL++G ++DA F + K V P++V+ T++ +C++ +D
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLID 288
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A M K G+ ++ YN ++ GL AG +E G + P +VTY +L
Sbjct: 289 VARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLA 348
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
KG+ G + GA K+++ M+ +G P TY + G +E+A+ L ++ + G+
Sbjct: 349 KGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFK 408
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
+ + Y++LL LCK +++ A+ + EM+ + D ++LIH LC+ A
Sbjct: 409 LNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQL 468
Query: 342 FEDMIRRGLVPHYL 355
+E M + PH+
Sbjct: 469 YEQMRLKRKFPHHF 482
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 18/366 (4%)
Query: 20 DKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEIL 78
D + H V PD V+ +T L + + G++ A + +++ + + L
Sbjct: 330 DDMEKHGVEPDVVTYNT---LAKGFLLLGLMSGARKVVQKM----LLQGLNPDLVTYTTL 382
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ C+ G ++ A + +++ L + + V YN+LL+ + +++A + EM
Sbjct: 383 ICGHCQMGNIEEALKL--RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETL 440
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ P+ + Y L+ G C+ V RA +L ++MR + P+ V+ GL + G E
Sbjct: 441 RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEA 500
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ + + +V Y ++ GY + + A ++ MI RG PS T+N
Sbjct: 501 RNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLING 560
Query: 259 FSKFGKVEDAMNLYRKMIE----SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G + +A RKM+E G P +TY L+ C+ + EM+
Sbjct: 561 FCRRGDLMEA----RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
T T+LI LCR K E+ E M +GL+P +T+ + F K A
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676
Query: 375 KLCNVM 380
+L N+M
Sbjct: 677 QLYNMM 682
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 145/323 (44%), Gaps = 22/323 (6%)
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWF 120
L+ +N+DS ++++L + + + A K K+L+ Q+ PT YN LL+
Sbjct: 160 LEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPT---YNSLLH--- 213
Query: 121 RSKNVKDAERFW---LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
N++ + W E++ + T L+ G C +++ AI + + K + P
Sbjct: 214 ---NMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGP 269
Query: 178 NAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
+ + NT++ + G + M++ L+ + +Y L+ G C AG ++ A
Sbjct: 270 SIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDS----FSYNILLHGLCVAGSMDEA 325
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
M G P TYN + F G + A + +KM+ G PD +TY L+
Sbjct: 326 LGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICG 385
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
C+ ++ A+++ +E RG +++ ML+ LC++ + +EA F++M L P
Sbjct: 386 HCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPD 445
Query: 354 YLTFKRLNDEFKKRGMTALAQKL 376
++ + L K G A +L
Sbjct: 446 FIVYSILIHGLCKEGFVQRAYQL 468
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 109/282 (38%), Gaps = 43/282 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + R G + A E +K + L+++ C+ G ++ E
Sbjct: 553 TFNTLINGFCRRGDLMEARKMLEVIR----LKGLVPSVVTYTTLMNAYCEVGNMQ---EM 605
Query: 95 FHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
FH E++ + PT Y +L+ G R + ++ + M + + P+ VTY T+++
Sbjct: 606 FHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQC 665
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C+ + + +A++L M +P + Y +I+ L G ++V M+
Sbjct: 666 FCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725
Query: 214 MVTYTSLVKGYCKAGDLEGA-------------------SKILK---------------- 238
VTY +++K +C G + A S ++
Sbjct: 726 KVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFV 785
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
MM+S G P P F + G +++SG+
Sbjct: 786 MMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 171/343 (49%), Gaps = 13/343 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS +T LI Y+R G A+ F + KN + L+D C+ G
Sbjct: 344 MPDLVSYNT---LIYGYSRLGNFAEALLLFSELRS----KNLVPSVVTYNTLIDGGCRTG 396
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A K + P V + IL+ G+ + N+ A+ + EM + P+ +
Sbjct: 397 NLDIAKGM--KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIA 454
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T + G +L +A + +EM+ EG P+ I YN +I+GL + G F++ + ++++
Sbjct: 455 YTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMR 514
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P VTYTS++ + +G L A ++ M+ +G PS TY ++ G+++
Sbjct: 515 LEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLD 574
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + +M + G +P+ +TY+ L+ LCKE+ +D+A + EM+ +G + T T+LI
Sbjct: 575 FAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVP----HYLTFKRLNDEFK 365
+ + + +A ++DM+ R + P H K L+ ++K
Sbjct: 635 NENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 12/355 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLD---MVKNFDSGASLFEILLDSLCKQGR 87
VS T+ LIR + + M FE AN+L + + + ++ SLC+ GR
Sbjct: 275 VSAHTYNPLIRGFCKKEM-------FEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGR 327
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A Y +++ P + YN L+ G+ R N +A + E+R +N+ P+VVTY
Sbjct: 328 VSDARRYLDVM--VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTY 385
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++G CR +D A + +M K G+ P+ + + ++ G + G + + L
Sbjct: 386 NTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLS 445
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + YT+ + G K G+ A + + M + GF P TYN K G +D
Sbjct: 446 RGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDD 505
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L +KM G PD +TY ++ L A +V +M +G + T T+LIH
Sbjct: 506 ANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIH 565
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ D A F++M +G+ P+ +T+ L K M +A L M S
Sbjct: 566 SYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMES 620
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 16/369 (4%)
Query: 28 PDFVSKDT-FVILIRRYARAGMVEAAIWTFEFA-------NNLDMV------KNFDSGAS 73
P+F +T FV ++ A+ G ++ A W E A LD++ +N +
Sbjct: 79 PNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVK 138
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L ++L+ K+ ++ F+K ++ P VR N +L V + E +
Sbjct: 139 LLDLLIQVFAKKLILEKCLMVFYKM--VNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYS 196
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M K + P +VT+ T+++ C+ V RA+ ++ MR G +PN + YN +++GL G
Sbjct: 197 VMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKG 256
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F+ ++E+ + + TY L++G+CK E A+ + + M+ RG LP+ TYN
Sbjct: 257 EFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYN 316
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ G+V DA M+ PD ++Y+ L+ + A+ + E++ +
Sbjct: 317 TIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSK 376
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ T LI CR D A +DMI+ GL P +TF L F + G +A
Sbjct: 377 NLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMA 436
Query: 374 QKLCNVMSS 382
++L + M S
Sbjct: 437 KELFDEMLS 445
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 35/286 (12%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILL------DS 81
PD V TF IL+R + + G NL M K LF+ +L D
Sbjct: 415 PDVV---TFTILVRGFCQMG-------------NLPMAK------ELFDEMLSRGLKPDC 452
Query: 82 LCKQGRVKA------ASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ R+ S+ F ++E+ + + P + YN+L+NG + N DA +
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQK 512
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR E + P+ VTY +++ + + +A + +M K+GI P+ + Y +I GR
Sbjct: 513 MRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGR 572
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + P ++TY +L+ G CK ++ A + M S+G P+ TY
Sbjct: 573 LDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTI 632
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
S +DA+ LY+ M++ PD T+ L+K L K+ KL
Sbjct: 633 LINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKL 678
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 14/338 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLCKQGRVKA 90
T+ LI +AG ++ AI + +MV+ G L + +L+D LCK+ +V
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLD-----EMVRQ---GVPLNVVTYTVLVDGLCKERKVAE 381
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + ++ +Y L++G F +KN + A EM+ + + ++ YG L
Sbjct: 382 AEDVLRMMEK--AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++G C + ++D A L+ +M + G+EPN I+Y T++D ++G+ E M+++ L
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P ++TY +L+ G CKAG ++ A M G P+ Y K G + +A+
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L+ +M+ G + D++ Y LL K+ L A + +M G +DL T I C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ EA F +MI G+ P + L +++K G
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 156/327 (47%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I++D LCK+G + A F + KE+ P V +N L++G+ + + + E+ E
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEM--GCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR+ +VVTY L+ +C+ R++ A M++EG+ N + ++T +D + G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + V TYT L+ G CKAG L+ A +L M+ +G + TY
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K KV +A ++ R M ++G + L Y L+ + A+ + EMK +G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG----MT 370
++D+ LI LC ++K DEA + M GL P+Y+ + + D K G
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488
Query: 371 ALAQKLCN--VMSSVPRSMELLDSRCK 395
A+ QK+ + +V L+D CK
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCK 515
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 5/281 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V + LL+ + DA R +R+ V PN T ++ RL R DR+ RLV+ +
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHIL---LRLAR-DRSGRLVRRL 179
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
++ PN +N VID L + G E + R P +VT+ SL+ GY K G+L
Sbjct: 180 FEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ ++++ M G TYN F KFG++E A + M G + +T+
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CKE + A+++ +M+ RG ++ T T LI C+ + D+A ++M+R+G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP-RSMELL 390
+ +T+ L D K A A+ + +M R+ ELL
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 158/315 (50%), Gaps = 5/315 (1%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
G ++ ++ SL K G + A E F K +S P++ YN+L+N + A
Sbjct: 9 GGDAYDFVVQSLAKAGMLAQALEVFETMK--SESCVPSLVTYNVLINSRCNAGEFGKALD 66
Query: 131 FWLEMRKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ M++E V P+ TY TL+ G C + A +L+ EMR + I N Y+++I L
Sbjct: 67 LFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSL 126
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
V+ + EE ++E + P + + +++G+ ++ ++E A ++ + M+ G+ P
Sbjct: 127 VKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMI--ESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+Y+ +K GK+++++ + +M +GY P+ +T+ L+ LC+ +L+ A++V
Sbjct: 187 VSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 246
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M GC + T T LI LCR K +A FE M + + P + + L + KR
Sbjct: 247 GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306
Query: 368 GMTALAQKLCNVMSS 382
G A+KL MS
Sbjct: 307 GSMDEAEKLYREMSG 321
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 150/306 (49%), Gaps = 7/306 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++ + ++ A E + ++ + P Y+IL++G + + ++ + E
Sbjct: 154 FNGVMQGFARSNNMEKAREVYQHM--VESGYKPDNVSYHILIHGLAKIGKLDESLKILSE 211
Query: 135 M--RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M R PNV+T+ TL+ G CR +++A+ + M + G +PN Y T+I GL A
Sbjct: 212 MAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRA 271
Query: 193 GRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI-SRGFLPSPT 250
+ + + E+ C P P V Y SL+ GYCK G ++ A K+ + M G P+
Sbjct: 272 EKVIQARELFEKMTQACIP-PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV 330
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+N F K GK+ A L +M G D TY IL+ L + KLD A++V K+M
Sbjct: 331 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQM 390
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ + +D + + LC+ D+A A FE + G VP+ TF+ L++ K G
Sbjct: 391 REKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRV 450
Query: 371 ALAQKL 376
AQKL
Sbjct: 451 EDAQKL 456
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 169/355 (47%), Gaps = 8/355 (2%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+ D + +++ A+AGM+ A+ FE + V + + + +L++S C G
Sbjct: 8 IGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVT----YNVLINSRCNAGEFGK 63
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + F K ++ P YN L++G S N + A + EMR +N+ NV TY ++
Sbjct: 64 ALDLFQSMKR-EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++ + + + + ++++EM G P+ +N V+ G + E+ + + +
Sbjct: 123 IKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY 182
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISR--GFLPSPTTYNYFFRYFSKFGKVEDA 268
P V+Y L+ G K G L+ + KIL M R G++P+ T++ + G++E A
Sbjct: 183 KPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKA 242
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ ++ M+E+G P++ TY L+ LC+ +K+ A ++ ++M D LI
Sbjct: 243 LEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAG 302
Query: 329 LCRMYKFDEASAEFEDMI-RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
C+ DEA + +M GL P +TF L D F K G A +L M +
Sbjct: 303 YCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 156/318 (49%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ + A + FE + KN + ++++ C+ G V+ ASE
Sbjct: 215 TYTILVDGLSAARDITKVEAVFEEMKS----KNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + P Y L+NG+ + ++ AE +M+ V N + + T+++GY
Sbjct: 271 FDEC--VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR VD+A+ + M K GIE + YNT+ GL A R +E ++ + P
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+YT+L+ +C GD+ A ++ + M G PS TYN + K G + +A ++
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKE 448
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G PD +Y L+ C K+D+A+++ +EMK RG +L T LI L + +
Sbjct: 449 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 508
Query: 335 FDEASAEFEDMIRRGLVP 352
+EA +++M+ GL P
Sbjct: 509 SEEAFQLYDNMLGDGLTP 526
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 153/309 (49%), Gaps = 8/309 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L + F + K ++ + V Y+ ++N + R+ NV+ A + E
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKS--KNLSGDVYFYSSVINAYCRAGNVRRASEVFDE 273
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ PN TYG L+ G+C++ +++ A LV +M+ G+ N IV+NT+IDG
Sbjct: 274 CVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNM 333
Query: 195 FE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ E+ +ME+ + + TY +L G +A ++ A +L++MI +G P+ +
Sbjct: 334 VDKALEIKMIMEKMGI---ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y G + +A L+R+M +G P +TY++++ K+ + A + KEM+
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME 450
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ + L+H C K D A FE+M +RG P+ + + L K G +
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 372 LAQKLCNVM 380
A +L + M
Sbjct: 511 EAFQLYDNM 519
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+++++G+ +S V A + EM + V N + Y +L++ Y R + DR ++K M
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
EGIEP Y ++DGL A +V + E + Y+S++ YC+AG++
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
AS++ + G P+ TY F K G++E A L M G +++ ++ ++
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+++ +D A+++ M+ G ++D+ T L L R + DEA MI +G+ P
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386
Query: 353 HYLTFKRL 360
+++++ L
Sbjct: 387 NHVSYTTL 394
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 16/276 (5%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFEILLDSLCKQGRVKA 90
++ T+ LI + + G +EAA DM V+ +F ++D C++ V
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVT-----DMQVRGVGINQIVFNTMIDGYCRKNMVDK 336
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E +++ V YN L G R+ + +A+ M ++ V PN V+Y TL
Sbjct: 337 ALEIKMIMEKMGIEL--DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 394
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS----GMMERFL 206
+ +C + A RL +EM G EP+ + YN ++DG ++ G E M ++ L
Sbjct: 395 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGL 454
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V P + +Y +LV G+C G ++ A ++ + M RG P+ Y +K G+ E
Sbjct: 455 V----PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+A LY M+ G TPD Y L+ L + K ++
Sbjct: 511 EAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNV 546
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
++VTP ++ +V+GYC+ RV A +L+ EM + G++ NA+ YN+++D
Sbjct: 139 DSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDA--------- 187
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
Y + D + +++LK+M + G P+ TY
Sbjct: 188 --------------------------YTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
S + ++ +M + D Y ++ C+ + A +V E G +
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T LI+ C++ + + A DM RG+ + + F + D + ++ M A ++
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 378 NVM 380
+M
Sbjct: 342 MIM 344
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 152/315 (48%), Gaps = 5/315 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++++C +G V A P Y +L S+ K+ E E
Sbjct: 324 YNVLINAMCNEGDVDEALNILSNLPS--HGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N P+ VT+ T+V C+ VDRAI +V M + G + + Y++++DGL + GR
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ R P + YT+++KG C E A +++ M+ P T+N
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G V+ A+ + +M E+G +PD +TY+ ++ LC E +D A+++ +++ G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ T L+ LC + ++++A +M+R P LTF + ++G+ A
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 375 KLCNVMSS---VPRS 386
+ +M+ VP S
Sbjct: 622 ETLKIMAENGCVPNS 636
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 22/356 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++ Y RAG +E A N + F F L+ +LC +GR+ A
Sbjct: 221 TYNTMVNGYCRAGRIEDA---RRLINGMP----FPPDTFTFNPLIRALCVRGRIPDALAV 273
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F L + +P+V Y+ILL+ + + A EMR + P++VTY L+
Sbjct: 274 FDDM--LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAM 331
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C VD A+ ++ + G +P+A+ Y V+ L + R++EV ++ P
Sbjct: 332 CNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDE 391
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+ ++V C+ G ++ A +++ M G + TY+ G+V+DA+ L +
Sbjct: 392 VTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSR 451
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G PD + Y +LK LC ++ + A ++ EM C C D T ++ LC+
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
D A E M G P +T+ + D LCN S + +MELL
Sbjct: 512 VDRAIRVVEQMSENGCSPDIVTYNCIID------------GLCN-ESCIDDAMELL 554
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 181/444 (40%), Gaps = 77/444 (17%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L ++ + LL + + PD V TF ++ + G+V+ AI + +
Sbjct: 362 VLKSLCGSERWKEVEELLAEMTSNNCAPDEV---TFNTIVTSLCQQGLVDRAIEVVDHMS 418
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V + + + +LD LC GRV A E + K P Y +L G
Sbjct: 419 EHGCVADIVT----YSSILDGLCDVGRVDDAVELLSRLKSY--GCKPDTIAYTTVLKGLC 472
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + AE EM + P+ VT+ T+V C+ VDRAIR+V++M + G P+ +
Sbjct: 473 STEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV 532
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY---------------- 224
YN +IDGL ++ ++ C P +VT+ +L+KG
Sbjct: 533 TYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM 592
Query: 225 -------------------CKAGDLEGASKILKMMISRGFLPSPTTY------------- 252
C+ G L A + LK+M G +P+ +TY
Sbjct: 593 MRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKA 652
Query: 253 --------------------NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
N +K GK+E+A++L R M+ +G PD TY L
Sbjct: 653 QAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAY 712
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+C+ED D A+++ + ++ G D ++ CR + D A F M+ G +P
Sbjct: 713 GVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMP 772
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL 376
T+ L + G+ A++L
Sbjct: 773 DESTYVILLEALAYGGLLDEAKRL 796
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 19/360 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS-----GASLFEILLDSL 82
PD V T+ +LI G V+ A L+++ N S A + +L SL
Sbjct: 319 PDIV---TYNVLINAMCNEGDVDEA---------LNILSNLPSHGCKPDAVTYTPVLKSL 366
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C R K E + + AP +N ++ + V A M +
Sbjct: 367 CGSERWKEVEELLAEMTS--NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA 424
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++VTY ++++G C + RVD A+ L+ ++ G +P+ I Y TV+ GL ++E +M
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELM 484
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
L + P VT+ ++V C+ G ++ A ++++ M G P TYN
Sbjct: 485 AEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNE 544
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
++DAM L + G PD +T++ LLK LC D+ + A Q+ M C D T
Sbjct: 545 SCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTF 604
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+I LC+ +A + M G VP+ T+ + D K G A +L + M++
Sbjct: 605 NTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTN 664
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 21/356 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L ++++ A L+ + + PD V TF ++ + G+V+ AI E
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEV---TFNTVVASLCQKGLVDRAIRVVE--- 520
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
M +N S + + ++D LC + + A E + P + +N LL G
Sbjct: 521 --QMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC--GCKPDIVTFNTLLKGL 576
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+DAE+ M + N P+ +T+ T++ C+ + +AI +K M + G PN+
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636
Query: 180 IVYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
Y+ V+D L++AG+ E +SGM P ++TY +++ KAG +E A
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGMTNGT------PDLITYNTVISNLTKAGKMEEALD 690
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L++M+S G P TTY + + A+ + R++ ++G +PD Y+ +L C
Sbjct: 691 LLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFC 750
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
++ + DLAI M GC D T +L+ L DEA + G++
Sbjct: 751 RDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 19/396 (4%)
Query: 2 IKVLAKAKEFDSAWCLLLDKI---GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
++ L + E D A +L D + GG P V + ILI+R G V A F
Sbjct: 157 LRSLVQRGEIDEAL-VLFDSMASGGGRNCPPVVPCN---ILIKRLCSDGRVSDAERVFAA 212
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
V +++ +++ C+ GR++ A + + P +N L+
Sbjct: 213 LGPSATVVTYNT-------MVNGYCRAGRIEDARRLING-----MPFPPDTFTFNPLIRA 260
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ DA + +M +P+VVTY L++ C+ +A+ L+ EMR +G EP+
Sbjct: 261 LCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPD 320
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ YN +I+ + G +E ++ P VTYT ++K C + + ++L
Sbjct: 321 IVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M S P T+N + G V+ A+ + M E G D +TY +L LC
Sbjct: 381 EMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVG 440
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D A+++ +K GC D T ++ LC +++ A +M+ P +TF
Sbjct: 441 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFN 500
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
+ ++G+ A ++ MS S +++ C
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNC 536
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 183/390 (46%), Gaps = 21/390 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ VL + ++F++ ++ K+ ++ +TF I I+ +A A + + F+
Sbjct: 106 MMCVLGRTRQFET----MVAKLEEMGEKGLLTMETFSIAIKAFAEAKQRKKEVGIFDLMK 161
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F G + LLDSL K A F K K+ + P+++ Y ILL+GW
Sbjct: 162 KY----GFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKD---RFTPSLQTYTILLSGWC 214
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R KN+ +A R W EM P++V + ++EG + ++ AI+L + M+ +G PN
Sbjct: 215 RLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVR 274
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLV-----CEPGPTMVTYTSLVKGYCKAGDLEGASK 235
Y +I + E +E F V C+P + YT L+ G+ + ++
Sbjct: 275 SYTIMIQDFCKQKLMGEA---IEYFDVMVDRGCQPDAAL--YTCLITGFGRQKKMDMVYS 329
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+LK M RG P TYN + + +DA+ +Y+KMI+SG P TY++++K
Sbjct: 330 LLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYF 389
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
++ ++ EM +GC D ++ + I L R + EA E+M+ +G+ L
Sbjct: 390 VTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKALKL 449
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
+ + + K G + ++L M+ V +
Sbjct: 450 DYNKFASDISKTGNAVILEELARKMNFVGK 479
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 169/340 (49%), Gaps = 15/340 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNL--DM-VKNFDSGASLFEILLDSLCKQGRVKAA 91
+F IL+R +A A FE N L +M + S + ++L +LC + + A
Sbjct: 31 SFNILLRGFA-------ARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKA 83
Query: 92 SEYFHKRKE-----LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
YF+ R E + AP Y +++G F++ N ++ +M P ++T
Sbjct: 84 VSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLT 143
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y LV+G C+ +V+RA + +EM ++G +P+ I Y+++IDGL +AGR +E +++ +
Sbjct: 144 YTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMI 203
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P PT V YTS+V G CK G ++ A K ++ M R P TY++ + GKVE
Sbjct: 204 ARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVE 263
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A + +M + PD ++Y + ++ L + + A +V + M +GC D+ T ++I
Sbjct: 264 EAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIII 323
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
C+ A+ M + + P+ + + D F K
Sbjct: 324 DNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVK 363
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 177/368 (48%), Gaps = 31/368 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ +L+ +A VE A FE +M+ K + L+D L K GRV A
Sbjct: 143 TYTVLVDGLCKAHKVERACDVFE-----EMIRKGHKPDIIAYSSLIDGLSKAGRVDEA-- 195
Query: 94 YFHKRKELDQSWA----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
RK +D A PT Y ++ G + +++A + EMR+ + P V TY
Sbjct: 196 ----RKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF 251
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+V GY + +V+ A +++EM P+ I Y I+ L GR EE + E +
Sbjct: 252 IVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 311
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P M TY ++ +CK G + A+ +L++M P+ Y F K ++E+A+
Sbjct: 312 CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEAL 371
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID--LDTSTMLIH 327
LY+++++ G P +TY+ ++ LCK K+D A+++ +EM+ R +++ + T +M+IH
Sbjct: 372 ELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIH 431
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSM 387
L ++ + A +MI G++P T+ T+L Q L V R+M
Sbjct: 432 GLGKVGMEERAFDLLAEMIDNGVIPDCFTY------------TSLIQTLAGA-GKVSRAM 478
Query: 388 ELLDSRCK 395
ELL+ K
Sbjct: 479 ELLEEMLK 486
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 171/361 (47%), Gaps = 14/361 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KA D A L+ I P V+ + ++ + G ++ A+ T +
Sbjct: 182 LIDGLSKAGRVDEARKLVDLMIARGPPPTAVA---YTSIVAGLCKCGRIQEAVKTIQEMR 238
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGW 119
+ D+ + ++ G+V+ E F +E+ D+ AP Y + +
Sbjct: 239 RRRLRPRVDT----YSFIVTGYIGMGKVE---EAFAVMEEMADRDCAPDTISYTMFIEAL 291
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++AE+ + M ++ P++ TYG +++ +C+ + A +++ M K ++PN
Sbjct: 292 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 351
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+Y ++DG V++ R EE + +R L P+ VTY +++ CK ++ A ++L+
Sbjct: 352 YIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE 411
Query: 240 MISRG--FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M R PS TY+ K G E A +L +MI++G PD TY L++ L
Sbjct: 412 MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 471
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K+ A+++ +EM G D T L+ +LCR D A ++M+R G P+ TF
Sbjct: 472 GKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTF 530
Query: 358 K 358
K
Sbjct: 531 K 531
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 148/345 (42%), Gaps = 47/345 (13%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL +L + G++ A +F P V +NILL G+ + + EM+
Sbjct: 3 LLLALVRGGQLSDALGFFQS-----SISEPNVSSFNILLRGFAARDDFEVVNALLREMKA 57
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK------EGIE-PNAIVYNTVIDGLV 190
+T N T+G ++ C R +D+A+ + E IE P+++ Y ++DGL
Sbjct: 58 RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+AG ++ E+ + + PT++TYT LV G CKA +E A + + MI +G P
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK-------------- 296
Y+ SK G+V++A L MI G P + Y ++ LCK
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237
Query: 297 ---------------------EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
K++ A V +EM R C D + TM I L + +
Sbjct: 238 RRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 297
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+EA FE M+ +G P T+ + D F K G A A + +M
Sbjct: 298 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLM 342
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N+++ LV G+ + G + + P + ++ L++G+ D E + +L+ M +
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSI---SEPNVSSFNILLRGFAARDDFEVVNALLREMKA 57
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR-------KMIESGYTPDRLTYHILLKILC 295
RG + T+ ++ A++ + ++ E+ PD +TY ++ L
Sbjct: 58 RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K D ++ ++M C+ L T T+L+ LC+ +K + A FE+MIR+G P +
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVM 380
+ L D K G A+KL ++M
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLM 202
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
+D P Y L+ + V A EM K + P+ TYGTLV+ CR V
Sbjct: 450 IDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDV 508
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTV 185
D A L++EM + G PN + V
Sbjct: 509 DAAWDLLQEMMRNGHTPNEFTFKAV 533
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKQGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK M+ Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKA 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + M+R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKAGQYDKAVKLLD 350
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 132/295 (44%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ ++LK+M+ R + YN + + K + DA MIE+ + PD
Sbjct: 418 SPDSXFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPD 472
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 12/296 (4%)
Query: 70 SGASLFEILLDSLCKQ-GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
S ASL +L+ +LCK G + AA F R+ ++ P Y L+ G R + +A
Sbjct: 154 SVASL-NVLIKALCKNSGTMDAALRIF--REMPNRGCPPHSYTYGTLIXGLCRLGKIGEA 210
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ + EM + +P VVTY +L+ G C+ + +D AIRL++EM +GI+PN Y++++DG
Sbjct: 211 KELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDG 270
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
++G +++ + P M+TY++LV G CK G L+ A +IL M +G P
Sbjct: 271 HCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPD 330
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-------LCKEDKLD 301
Y F K +A N +M+ G +P+RLT+ + ++I LC E +
Sbjct: 331 AGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-N 389
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
A Q+ M+ RG ID T L++ C +A+ ++M+ G +P T+
Sbjct: 390 RAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTW 445
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 159/331 (48%), Gaps = 15/331 (4%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ-GRVKA 90
S TF ++I R A F A L + + + ++ E + S+C+ GRV
Sbjct: 49 SHQTFSLMISRLVSAN-------HFRLAEEL-LCRMKEEKCNITEDIFLSICRAYGRVHK 100
Query: 91 ---ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A F K KE + P+ + Y + +K A RF+ MR+ + P+V +
Sbjct: 101 PLDAVRVFRKMKEYE--CEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASL 158
Query: 148 GTLVEGYCRLR-RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
L++ C+ +D A+R+ +EM G P++ Y T+I GL G+ E + +
Sbjct: 159 NVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEME 218
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT+VTY SL+ G C++ DL+ A ++L+ M S+G P+ TY+ K G
Sbjct: 219 TKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSS 278
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A+ L M+ + P+ +TY L+ LCKE KL A+++ MK +G D +I
Sbjct: 279 RALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKII 338
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
C + KF EA+ ++M+ G+ P+ LT+
Sbjct: 339 SGFCDICKFHEAANFLDEMVLGGISPNRLTW 369
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKE--NVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
+ ++++++ + + + AE M++E N+T ++ + ++ Y R+ + A+R+
Sbjct: 51 QTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDI--FLSICRAYGRVHKPLDAVRVF 108
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK- 226
++M++ EP+ Y TV LV + + P++ + L+K CK
Sbjct: 109 RKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKN 168
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G ++ A +I + M +RG P TY + GK+ +A L+++M +P +T
Sbjct: 169 SGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVT 228
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ LC+ LD AI++ +EM +G ++ T + L+ C+ A + M+
Sbjct: 229 YXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMV 288
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
R +P+ +T+ L K G
Sbjct: 289 SRRHLPNMITYSTLVHGLCKEG 310
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 162/336 (48%), Gaps = 13/336 (3%)
Query: 42 RYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL 101
R+ A + AA+W + F ++ +++ + C+QGR + F + E+
Sbjct: 196 RFEEADALLAAMWR----------EGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEM 245
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P V Y ++G + VK A EM + + PNV T+ +L++G C++ +
Sbjct: 246 GNP--PNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTE 303
Query: 162 RAIRL-VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
RA RL +K ++ +PN Y +I G + G+ ++ R + P TYT+L
Sbjct: 304 RAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTL 363
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G+C+ G + A +++ M GFLP+ TYN F K GK++ A + R G
Sbjct: 364 IDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGL 423
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD++TY +L+ CK+ + A+ + +M C D+DT T +I + C+ + +++
Sbjct: 424 CPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQ 483
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F+ + GLVP T+ + + + G + A K+
Sbjct: 484 LFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
V P+ ++ LV G C+ R + A L+ M +EG ++ V+ GRF +V
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
G+ R + P +V YT+ V G CK G ++ A +L+ M+ +G P+ T+
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295
Query: 259 FSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G E A L+ K+++ S Y P+ TY +++ CKE KL A + M +G
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ +T T LI CR FD A M G +P+ T+ + F K+G A K+
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415
Query: 378 NVMSS 382
+ +S
Sbjct: 416 RMATS 420
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 2/291 (0%)
Query: 93 EYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ H R+ D P R + L+ G + ++A+ M +E + + T +V
Sbjct: 164 HFAHARQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVV 223
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+CR R L M + G PN + Y +DGL + G ++ ++E +
Sbjct: 224 RAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLK 283
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + T+TSL+ G CK G E A ++ LK++ S + P+ TY + K GK+ A
Sbjct: 284 PNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEM 343
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M+E G P+ TY L+ C+ D A ++ +MK G ++ T +I C
Sbjct: 344 LLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFC 403
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ K +A +GL P +T+ L E K+G A L N M+
Sbjct: 404 KKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMA 454
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 20/319 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I Y + G + A + N ++ + L+D C+ G A E
Sbjct: 324 TYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT----YTTLIDGHCRGGSFDRAFEL 379
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+K K + + P + YN ++ G+ + ++ A + + + P+ VTY L+ +
Sbjct: 380 MNKMKL--EGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEH 437
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + A+ L +M + P+ Y T+I + + E+ + ++ L PT
Sbjct: 438 CKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTK 497
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYTS++ GYC+ G A K+ + M+ G LP P TY K ++E+A L+
Sbjct: 498 QTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFET 557
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQ----VSKEMKCRGCDI---------DLDT 321
M++ P +T L C+ DK +A+ + K + D +LD
Sbjct: 558 MLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADALVRKLSAVDNLDA 617
Query: 322 STMLI-HLLCRMYKFDEAS 339
+++ + ++L + Y D A+
Sbjct: 618 ASLFLKNVLDKHYAVDHAT 636
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 195/436 (44%), Gaps = 55/436 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ V A+ K A LL +++ PD +T+ +LI Y A E A FA
Sbjct: 125 LLDVFARTKRHREAGNLLKNELATIFRPDV---ETWNVLITGYCLAREPEEA-----FAV 176
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+M ++F SL ++L LCK G+V AA ++F + + +S + ++IL+NG
Sbjct: 177 IREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF---EAVRRSMPVSAATFSILING 233
Query: 119 ----------------------------------WF-RSKNVKDAERFWLEMRKENVTPN 143
W ++K +++A ++ TP
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPT 293
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+ TY L+ G C++ R++ AI L++++ G P+ + Y ++IDGL + R E + +
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
V YT+L++G + G + AS + K M S G +P T + SK G
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++ A+ +++ M G P+ + Y L+ LCK K+D A+++ +MK C D T
Sbjct: 414 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 473
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+LI LC+ + A A F++M+ G P T+ L K G T A C V+ +
Sbjct: 474 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAA---CGVLDDM 530
Query: 384 PRS----MELLDSRCK 395
S L+D CK
Sbjct: 531 SSSRFVYSSLVDGLCK 546
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 170/386 (44%), Gaps = 26/386 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LAK K+ A L++KI + ++ T+ L+ + G +E AI
Sbjct: 265 IVNWLAKNKKIQEA-VALMEKITANGCTPTIA--TYNALLNGLCKMGRLEEAI------- 314
Query: 61 NLDMVKNF-DSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
D+++ D+G + + L+D L K+ R A + F ++ + A Y L
Sbjct: 315 --DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF--KEMASRGLALDTVCYTAL 370
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ G ++ + A + M P+VVT T+++G + R+ A+R+ K M G+
Sbjct: 371 IRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 430
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
PN +VY+ +I GL +A + + M+ + P +TY L+ G CK+GD+E A
Sbjct: 431 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 490
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
M+ G P TYN K G + A + M S R Y L+ LC
Sbjct: 491 FFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSS-----RFVYSSLVDGLC 545
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K KL+ + EM+ G + T T LI LC+ + DEA + F + IR+ +PH
Sbjct: 546 KSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLF-NAIRKEGMPHPY 603
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMS 381
+ + K G Q + M+
Sbjct: 604 AYNSIISALIKSGKVNEGQAVYQEMT 629
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 45/312 (14%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ LIR + G + A ++ + V + + ++D L K GR+ AA F
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVT----LSTMIDGLSKAGRIGAAVRIF 422
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ + AP VY+ L++G +++ + A +M+K TP+ +TY L++G C
Sbjct: 423 KSMEA--RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 480
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ V+ A EM + G +P+ YN +I GL +AG + G+++ + +
Sbjct: 481 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLD-----DMSSSRF 535
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGF------------------------------ 245
Y+SLV G CK+G LEG + M G
Sbjct: 536 VYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIR 595
Query: 246 ---LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+P P YN K GKV + +Y++M + PDR+TY+ LL + +++D
Sbjct: 596 KEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDR 654
Query: 303 AIQVSKEMKCRG 314
A EM RG
Sbjct: 655 AHYYYLEMTGRG 666
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 31/254 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA++ D A +L PD + T+ ILI ++G VEAA F+
Sbjct: 440 LIHGLCKARKMDCALEMLAQMKKAFCTPDTI---TYNILIDGLCKSGDVEAARAFFD--- 493
Query: 61 NLDMVKNFDSGAS----LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ ++G + IL+ LCK G AA + + VY+ L+
Sbjct: 494 -----EMLEAGCKPDVYTYNILISGLCKAGNTDAACGVL-------DDMSSSRFVYSSLV 541
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G +S ++ + EM + V N T L+ C+ RVD A+ L +RKEG+
Sbjct: 542 DGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM- 599
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
P+ YN++I L+++G+ E + M R+ P VTY +L+ G A ++ A
Sbjct: 600 PHPYAYNSIISALIKSGKVNEGQAVYQEMTRWW----KPDRVTYNALLNGMIGANRMDRA 655
Query: 234 SKILKMMISRGFLP 247
M RG++P
Sbjct: 656 HYYYLEMTGRGYVP 669
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G + + N ++D R E +++ L P + T+ L+ GYC A + E A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173
Query: 234 SKILKMMISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
+++ M G PS T+N K GKV AM+ + + + T+ IL+
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILIN 232
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L K + A +++E GC ID+ T T +++ L + K EA A E + G P
Sbjct: 233 GLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTP 292
Query: 353 HYLTFKRLNDEFKKRG 368
T+ L + K G
Sbjct: 293 TIATYNALLNGLCKMG 308
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 148/302 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL SLC QG+ A + E +P V YN +++G+F+ +V A + E
Sbjct: 188 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 247
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P++VTY ++V C+ R +D+A +++M + + PN YN +I G G+
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 307
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E + + P +VT + L+ CK G ++ A + M +G P +YN
Sbjct: 308 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 367
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + D +L+ M+ G PD T+++L+K LD A+ + EM+ G
Sbjct: 368 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T +I LCR+ K D+A +F MI +G+ P + L F G A+
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 487
Query: 375 KL 376
+L
Sbjct: 488 EL 489
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 175/374 (46%), Gaps = 9/374 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA+ D A L + +P+ T+ LI Y+ G + A+ F+
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPN---NWTYNNLIYGYSSTGQWKEAVRVFKEMR 319
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + + +L+ SLCK G++K A + F Q+ P V YNI+LNG+
Sbjct: 320 RHSILPDVVT----LSMLMGSLCKYGKIKEARDVFDTMAMKGQN--PDVFSYNIMLNGYA 373
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ D + M + + P+ T+ L++ Y +D+A+ + EMR G++P+ +
Sbjct: 374 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 433
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVI L G+ ++ + + P Y L++G+C G L A +++ +
Sbjct: 434 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 493
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++ G ++ K G+V DA N++ + G PD + Y++L+ C K+
Sbjct: 494 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 553
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A++V M G + ++ L++ C++ + DE + F +M++RG+ P + + +
Sbjct: 554 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 613
Query: 361 NDEFKKRGMTALAQ 374
D + G T A+
Sbjct: 614 IDGLFEAGRTVPAK 627
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 171/361 (47%), Gaps = 9/361 (2%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
+G PDF TF +LI+ YA GM++ A+ F + + ++ +
Sbjct: 389 LGDGIAPDFY---TFNVLIKAYANCGMLDKAMIIFNEMRD----HGVKPDVVTYRTVIAA 441
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC+ G++ A E F++ +DQ AP YN L+ G+ ++ A+ E+ +
Sbjct: 442 LCRIGKMDDAMEKFNQM--IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
++V + +++ C+L RV A + G+ P+A+VYN ++DG G+ E+ +
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + P +V Y +LV GYCK G ++ + + M+ RG PS Y+ +
Sbjct: 560 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFE 619
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G+ A + +M ESG D TY+I+L+ L K D AI + KE++ I++ T
Sbjct: 620 AGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 679
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+I + + + +EA F + R LVP +T+ + K G+ A+ + + M
Sbjct: 680 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 739
Query: 382 S 382
+
Sbjct: 740 N 740
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 176/377 (46%), Gaps = 27/377 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L + + D A I PD K + LI+ + G +++A E
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYNCLIQGFCTHGSLLKAKELISEIM 494
Query: 60 NN---LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
NN LD+V F ++++LCK GRV A F ++ P VYN+L+
Sbjct: 495 NNGMHLDIV--------FFSSIINNLCKLGRVMDAQNIFDL--TVNVGLHPDAVVYNMLM 544
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ ++ A R + M + PNVV YGTLV GYC++ R+D + L +EM + GI+
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGAS 234
P+ I+Y+ +IDGL EAGR V M+ + E G M TY +++G K + A
Sbjct: 605 PSTILYSIIIDGLFEAGR--TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ K + + + T N + +VE+A +L+ + S P +TY I++ L
Sbjct: 663 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 722
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGLV 351
KE ++ A + M+ GC+ S +L H++ + K +E A A + R
Sbjct: 723 IKEGLVEEAEDMFSSMQNAGCE---PNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 779
Query: 352 PHYLTFKRLNDEFKKRG 368
+LT L D F +G
Sbjct: 780 LEHLTAMLLVDLFSSKG 796
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 9/304 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A+L + C+ G A + + R + + +PT Y IL++ R+ + A
Sbjct: 75 AALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELAL 134
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDG 188
F+ ++ + + N++ L+EG+C +R D A+ ++ E G P+ Y+ ++
Sbjct: 135 AFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 194
Query: 189 LVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
L + G+ + M E VC P +V Y +++ G+ K GD+ A + K M+ RG
Sbjct: 195 LCDQGKSGQADDLLRMMAEGGAVCS--PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 252
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TYN K ++ A R+M+ P+ TY+ L+ + A+
Sbjct: 253 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 312
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V KEM+ D+ T +ML+ LC+ K EA F+ M +G P ++ + + +
Sbjct: 313 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 372
Query: 365 KKRG 368
+G
Sbjct: 373 ATKG 376
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 14/338 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL----FEILLDSLCKQGRVKA 90
T+ LI +AG ++ AI + +MV+ G L + +L+D LCK+ +V
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLD-----EMVRQ---GVPLNVVTYTVLVDGLCKERKVAE 381
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + ++ +Y L++G F +KN + A EM+ + + ++ YG L
Sbjct: 382 AEDVLRMMEK--AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++G C + ++D A L+ +M + G+EPN I+Y T++D ++G+ E M+++ L
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P ++TY +L+ G CKAG ++ A M G P+ Y K G + +A+
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L+ +M+ G + D++ Y LL K+ L A + +M G +DL T I C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ EA F +MI G+ P + L +++K G
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 156/327 (47%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F I++D LCK+G + A F + KE+ P V +N L++G+ + + + E+ E
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEM--GCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR+ +VVTY L+ +C+ R++ A M++EG+ N + ++T +D + G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + V TYT L+ G CKAG L+ A +L M+ +G + TY
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K KV +A ++ R M ++G + L Y L+ + A+ + EMK +G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG----MT 370
++D+ LI LC ++K DEA + M GL P+Y+ + + D K G
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488
Query: 371 ALAQKLCN--VMSSVPRSMELLDSRCK 395
A+ QK+ + +V L+D CK
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCK 515
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 5/281 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V + LL+ + DA R +R+ V PN T ++ RL R DR+ RLV+ +
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHIL---LRLAR-DRSGRLVRRL 179
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
++ PN +N VID L + G E + R P +VT+ SL+ GY K G+L
Sbjct: 180 FEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ ++++ M G TYN F KFG++E A + M G + +T+
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CKE + A+++ +M+ RG ++ T T LI C+ + D+A ++M+R+G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP-RSMELL 390
+ +T+ L D K A A+ + +M R+ ELL
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 176/382 (46%), Gaps = 11/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++++L +K+F W L++ E F +S F I+ R Y+RA + A F
Sbjct: 108 LVEILGSSKQFALLWDFLIE---AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRM 164
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ D + LL SLC + V A E+F K K P+ + Y+IL+ GW
Sbjct: 165 VEFGIKPCVDD----LDQLLHSLCDKKHVNHAQEFFGKAKGF--GIVPSAKTYSILVRGW 218
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R ++ A + + EM + N +++ Y L++ C+ VD ++ +EM G++P+A
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ I +AG +++R + P + T+ ++K CK ++ A +L
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G P TYN Y +V A L +M + PDR TY+++LK+L + +
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY-KFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ + M R + T T++IH L R K +EA FE MI G+ P+ T +
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVE 458
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
L + G + L M
Sbjct: 459 MLRNRLVGWGQMDVVDVLAGKM 480
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 7/281 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ IL+R +AR A F+ + V + + + LLD+LCK G V
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLA----YNALLDALCKSGDVDGG 262
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F + L P + I ++ + + +V A + M++ ++ PNV T+ ++
Sbjct: 263 YKMFQEMGNL--GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+ C+ +VD A L+ EM ++G P+ YN+++ + + ++ R +
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR-YFSKFGKVEDAMN 270
P TY ++K + G + A++I + M R F P+ TY K GK+E+A
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 440
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ MI+ G P T +L L ++D+ ++ +M+
Sbjct: 441 YFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 187/383 (48%), Gaps = 11/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I+V+ K DSA + + + G + DF F L+ Y +G V A+ F
Sbjct: 35 LIQVVVSRKGKDSASDVFEAILETKGTQRSDFY---VFSGLMIAYLESGFVRDAVQCFRL 91
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ FD+ + E L++ K +++ ++ L+ + ++ +NIL+
Sbjct: 92 TKQHKIRVPFDTCRKVLEHLMEF----RYFKLVWDFY--KEVLECGYPASLYFFNILMQR 145
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + ++ A+ + + K + P+VV++ TL+ GY +L +D RL M G +P+
Sbjct: 146 FCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPD 205
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
Y+ +I+GL + G+ +E + + L P VT+T+L+ G+CK ++ A +I K
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+S+G P TYN K G+++ +L +MI +G PD+++Y L+ CKE
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L++A+++ +M +D T LI LCR + +A +M+ GL P T+
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYT 385
Query: 359 RLNDEFKKRGMTALAQKLCNVMS 381
+ +EF K+ + A KL M
Sbjct: 386 MIINEFCKKRDSKTASKLLREMQ 408
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 140/280 (50%), Gaps = 8/280 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL++R+ + G + A F+ + + S F L++ K G + E F
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVS----FNTLINGYIKLGDL---DEGF 191
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + S A P V Y+IL+NG + + +A + EM + PN VT+ TL+ G+
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +VD A+ + K+M +G+ P+ I YNT+I GL + G ++V +++ ++ P
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
++YT+L+ G CK GDLE A ++ MI Y + G+ DA + R+
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLRE 371
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
M+ G PD TY +++ CK+ A ++ +EM+ G
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + W P+V +N L+NG+ + ++ + R
Sbjct: 138 FFNILMQRFCKEGEMRLAQSVF----DAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M P+V TY L+ G C+ ++D A L EM G+ PN + + T+I G +
Sbjct: 194 KSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ + + ++ L P ++TY +L+ G CK G+L+ ++ MI G P +
Sbjct: 254 NEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKIS 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A+ L KMI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ AS +M R G +P +T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K ++ G+ S +N + F K G++ A +++ + + G P ++++ L+ K
Sbjct: 125 KEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKL 184
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LD ++ M G D+ T ++LI+ LC+ K DEA+ F +M+ GLVP+ +TF
Sbjct: 185 GDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTF 244
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
L K LA ++ M S S +L+
Sbjct: 245 TTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLI 277
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 148/302 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL SLC QG+ A + E +P V YN +++G+F+ +V A + E
Sbjct: 185 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 244
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P++VTY ++V C+ R +D+A +++M + + PN YN +I G G+
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 304
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E + + P +VT + L+ CK G ++ A + M +G P +YN
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + D +L+ M+ G PD T+++L+K LD A+ + EM+ G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T +I LCR+ K D+A +F MI +G+ P + L F G A+
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 484
Query: 375 KL 376
+L
Sbjct: 485 EL 486
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 9/374 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA+ D A L + +P+ T+ LI Y+ G + A+ F+
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPN---NWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + + +L+ SLCK G++K A + F Q+ P V YNI+LNG+
Sbjct: 317 RHSILPDVVT----LSMLMGSLCKYGKIKEARDVFDTMAMKGQN--PDVFSYNIMLNGYA 370
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ D + M + + P+ T+ L++ Y +D+A+ + EMR G++P+ +
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVI L G+ ++ + + P Y L++G+C G L A +++ +
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 490
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++ G ++ K G+V DA N++ + G PD + Y +L+ C K+
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM 550
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A++V M G + ++ L++ C++ + DE + F +M++RG+ P + + +
Sbjct: 551 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 610
Query: 361 NDEFKKRGMTALAQ 374
D + G T A+
Sbjct: 611 IDGLFQAGRTVPAK 624
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 171/361 (47%), Gaps = 9/361 (2%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
+G PDF TF +LI+ YA GM++ A+ F + + ++ +
Sbjct: 386 LGDGIAPDFY---TFNVLIKAYANCGMLDKAMIIFNEMRD----HGVKPDVVTYRTVIAA 438
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC+ G++ A E F++ +DQ AP YN L+ G+ ++ A+ E+ +
Sbjct: 439 LCRIGKMDDAMEKFNQM--IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
++V + +++ C+L RV A + G+ P+A+VY+ ++DG G+ E+ +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + P +V Y +LV GYCK G ++ + + M+ RG PS Y+ +
Sbjct: 557 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 616
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G+ A + +M ESG D TY+I+L+ L K D AI + KE++ I++ T
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 676
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+I + + + +EA F + R LVP +T+ + K G+ A+ + + M
Sbjct: 677 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736
Query: 382 S 382
+
Sbjct: 737 N 737
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 175/377 (46%), Gaps = 27/377 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L + + D A I PD K + LI+ + G +++A E
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYNCLIQGFCTHGSLLKAKELISEIM 491
Query: 60 NN---LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
NN LD+V F ++++LCK GRV A F ++ P VY++L+
Sbjct: 492 NNGMHLDIV--------FFSSIINNLCKLGRVMDAQNIFDL--TVNVGLHPDAVVYSMLM 541
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ ++ A R + M + PNVV Y TLV GYC++ R+D + L +EM + GI+
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGAS 234
P+ I+Y+ +IDGL +AGR V ++ + E G M TY +++G K + A
Sbjct: 602 PSTILYSIIIDGLFQAGR--TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 659
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ K + + + T N + +VE+A +L+ + S P +TY I++ L
Sbjct: 660 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 719
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGLV 351
KE ++ A + M+ GC+ S +L H++ + K +E A A + R
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCE---PNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776
Query: 352 PHYLTFKRLNDEFKKRG 368
+LT L D F +G
Sbjct: 777 LEHLTTMLLVDLFSSKG 793
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 9/304 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A+L + C+ G A + + R + + +PT Y IL++ R+ + A
Sbjct: 72 AALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELAL 131
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDG 188
F+ ++ + + N++ L+EG+C +R D A+ ++ E G P+ Y+ ++
Sbjct: 132 AFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 191
Query: 189 LVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
L + G+ + M E VC P +V Y +++ G+ K GD+ A + K M+ RG
Sbjct: 192 LCDQGKSGQADDLLRMMAEGGAVCS--PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 249
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TYN K ++ A R+M+ P+ TY+ L+ + A+
Sbjct: 250 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V KEM+ D+ T +ML+ LC+ K EA F+ M +G P ++ + + +
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369
Query: 365 KKRG 368
+G
Sbjct: 370 ATKG 373
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 179/405 (44%), Gaps = 21/405 (5%)
Query: 1 MIKVLAKAKEFDSAWCL--LLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++ +AK K+FD L + ++G H + T+ ILI + R + A+
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLY------TYNILINCFCRRSQISLALALLG 69
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L ++ LL+ C R+ A + E+ + P + L++
Sbjct: 70 KMMKL----GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM--GYRPDTITFTTLIH 123
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G F +A M + PN+VTYG +V G C+ +D A L+ +M IE
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ +++NT+ID L + ++ + + P +VTY+SL+ C G AS++L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
MI + P+ T+N F K GK +A L+ MI+ PD TY+ L+ C
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D+LD A Q+ + M + C DLDT LI C+ + ++ + F +M RGLV +T+
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS--VPRSME----LLDSRCKD 396
L G AQK+ M S VP + LLD C +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G + A +K + V ++N +++ + ++V DA + E
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEA--AKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A +L+ +M ++ I PN + +N +ID V+ G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F E + + + P + TY SL+ G+C L+ A ++ + M+S+ P TYN
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +VED L+R+M G D +TY L++ L + D A +V K+M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
D+ T ++L+ LC K ++A F+ M
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 167/334 (50%), Gaps = 11/334 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V T+ +++ + G ++ A F N ++ K ++ +F ++DSLCK
Sbjct: 148 PNLV---TYGVVVNGLCKRGDIDLA---FNLLNKMEAAK-IEADVVIFNTIIDSLCKYRH 200
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A F KE++ + P V Y+ L++ DA + +M ++ + PN+VT
Sbjct: 201 VDDALNLF---KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + + A +L +M K I+P+ YN++I+G R ++ M E +
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + TY +L+KG+CK+ +E +++ + M RG + TY + G +
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A ++++M+ G PD +TY ILL LC KL+ A++V M+ +D+ T +I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+C+ K D+ F + +G+ P+ +T+ +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y +++NG + ++ A +M + +VV + T+++ C+ R VD A+ L
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
KEM +GI PN + Y+++I L GR+ + S ++ + + P +VT+ +L+ + K
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A K+ MI R P TYN F +++ A ++ M+ PD T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ ++ +EM RG D T T LI L D A F+ M+
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D G
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNG 409
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 148/312 (47%), Gaps = 10/312 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR AS+ +++ P + +N L++ + + +AE+ +
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDM--IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++ P++ TY +L+ G+C R+D+A ++ + M + P+ YNT+I G ++ R
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 195 FEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
E+ + M R LV G T VTYT+L++G GD + A K+ K M+S G P
Sbjct: 341 VEDGTELFREMSHRGLV---GDT-VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ GK+E A+ ++ M +S D Y +++ +CK K+D + +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G ++ T +I LC EA A + M G +P T+ L + G
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 371 ALAQKLCNVMSS 382
A + +L M S
Sbjct: 517 AASAELIREMRS 528
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 17/348 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L + A LL D I P+ V TF LI + + G VEA
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLV---TFNALIDAFVKEGKFVEAEKL----- 277
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ DM+K + D + L++ C R+ A + F + + P + YN L+ G
Sbjct: 278 -HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM--VSKDCFPDLDTYNTLIKG 334
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +SK V+D + EM + + VTY TL++G D A ++ K+M +G+ P+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ ++DGL G+ E+ + + E + YT++++G CKAG ++ +
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ +G P+ TYN +++A L +KM E G PD TY+ L++ ++
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ ++ +EM R C D ST I L+ M F DM+
Sbjct: 515 DKAASAELIREM--RSCRFVGDAST--IGLVANMLHDGRLDKSFLDML 558
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K P++ + L+ ++++ D I L ++M++ GI N YN +I+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P++VT +SL+ GYC + A ++ M+ G+ P T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL------------ 302
K +A+ L +M++ G P+ +TY +++ LCK +DL
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 303 -----------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
A+ + KEM+ +G ++ T + LI LC ++ +AS
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
DMI + + P+ +TF L D F K G A+KL + M + RS++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM--IKRSID 287
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P++ + L+ K + + + M G + TYN F + ++ A+
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L KM++ GY P +T LL C ++ A+ + +M G D T T LIH L
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME- 388
K EA A + M++RG P+ +T+ + + KRG LA L N M + +
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 389 -----LLDSRCK 395
++DS CK
Sbjct: 186 VIFNTIIDSLCK 197
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 6/326 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI + G +E A F+ + +V N A + L+D C +G ++ A Y
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN----AVTYNTLIDGYCNKGDLERAFSY 300
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + + P+V YN+L++ F + +A+ EMRK+ + P+ +TY L+ GY
Sbjct: 301 --RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 358
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R RA L EM +GIEP + Y ++I L R +E + E+ L P +
Sbjct: 359 SRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 418
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+ + +++ G+C G++E A +LK M + P T+N + + GKVE+A L +
Sbjct: 419 IMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD ++Y+ L+ + + A V EM G + L T LI LC+ +
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQE 538
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++M+ +G+ P T+ L
Sbjct: 539 GDLAEELLKEMVNKGISPDDSTYLSL 564
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+K A F M PNVV+Y T++ GY ++ A R++ MR +GIEP++ Y +
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 248
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G+ + GR EE SG+ ++ + P VTY +L+ GYC GDLE A M+ +G
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+PS +TYN G++ +A ++ ++M + G PD +TY+IL+ + A
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAF 368
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ EM +G + T T LI++L R + EA FE ++ +G+ P + F + D
Sbjct: 369 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGH 428
Query: 365 KKRGMTALAQKLCNVMS--SVPRS----MELLDSRCKD 396
G A L M SVP L+ RC++
Sbjct: 429 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 466
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 9/353 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ VS +T +I Y+ G +E A + VK + + + L+ +CK+GR
Sbjct: 206 PNVVSYNT---IIHGYSSRGNIEGARRILDAMR----VKGIEPDSYTYGSLISGMCKEGR 258
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ AS F K E+ P YN L++G+ +++ A + EM K+ + P+V TY
Sbjct: 259 LEEASGLFDKMVEI--GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 316
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
LV R+ A ++KEMRK+GI P+AI YN +I+G G + + L
Sbjct: 317 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLS 376
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
PT VTYTSL+ + ++ A + + ++ +G P +N G VE
Sbjct: 377 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVER 436
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L ++M PD +T++ L++ C+E K++ A + EMK RG D + LI
Sbjct: 437 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLIS 496
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
R +A ++M+ G P LT+ L K LA++L M
Sbjct: 497 GYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 11/301 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
VP+ V+ +T LI Y G +E A F+ +MVK S + +L+ +L +
Sbjct: 275 VPNAVTYNT---LIDGYCNKGDLERA-----FSYRDEMVKKGIMPSVSTYNLLVHALFME 326
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+ A + + ++ + P YNIL+NG+ R N K A EM + + P V
Sbjct: 327 GRMGEADDMIKEMRK--KGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY +L+ R R+ A L +++ +G+ P+ I++N +IDG G E +++
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P VT+ +L++G C+ G +E A +L M RG P +YN + + G +
Sbjct: 445 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDI 504
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA + +M+ G+ P LTY+ L+K LCK + DLA ++ KEM +G D T L
Sbjct: 505 KDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564
Query: 326 I 326
I
Sbjct: 565 I 565
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 151/319 (47%), Gaps = 37/319 (11%)
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
+G++K A E+ + L + P V YN +++G+ N++ A R MR + + P+
Sbjct: 186 EGKLKKAREFIGFMEGL--GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG---------------- 188
TYG+L+ G C+ R++ A L +M + G+ PNA+ YNT+IDG
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303
Query: 189 ---------------LVEA----GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
LV A GR E M++ P +TY L+ GY + G+
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A + M+S+G P+ TY S+ ++++A +L+ K+++ G +PD + ++
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ C ++ A + KEM + D T L+ CR K +EA ++M RG
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483
Query: 350 LVPHYLTFKRLNDEFKKRG 368
+ P ++++ L + +RG
Sbjct: 484 IKPDHISYNTLISGYGRRG 502
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 163/315 (51%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNXLFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKX 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLD 350
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 23/294 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
EP+A YN +I+ L G+ + ++ R L +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQXXKAETLV-RQLXKLGVQDXTALNTLIRGHSQEGS 418
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD
Sbjct: 419 PDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPD 472
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 186/361 (51%), Gaps = 22/361 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A YF+K L + PT +N+++ G+F
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNVMIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ ++P+VVTY T++ GY R+++++ A + EM+ IEP +
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V + ++ ++E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S K G ++ A ++ + MI + Y IL++ CK
Sbjct: 282 MDKYL--APTDNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKA 339
Query: 298 DKLDLAIQ-----VSKEMKCR-GCDIDLDTS--TMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ D A++ + K++ R + L+ S ++I LC + +A +++ G
Sbjct: 340 GQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNLMIEYLCNNGQASKAETLVRQLMKLG 399
Query: 350 L 350
+
Sbjct: 400 V 400
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S + L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCK 303
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFLRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNLMIEYLCNNGQASKAETLVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 168/365 (46%), Gaps = 41/365 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I ++G+VEAA F + ++ + + + LL+ CK G +K A
Sbjct: 312 TYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVIT----YNSLLNGYCKAGNLKEALLL 367
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG- 153
F + APTV YNI ++G+ R ++++A EM ++ PNV TY L++G
Sbjct: 368 FGDLRR--AGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGS 425
Query: 154 --YCRLRR--------------------------------VDRAIRLVKEMRKEGIEPNA 179
C L + RA+ L + + EGI +
Sbjct: 426 LNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDT 485
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN +I GL + G ++ + + + P +TYT L+ +C+ G L A KI
Sbjct: 486 VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN 545
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MIS G LPS T+ + + G + A +RKM+E G P+ +TY++L+ LC+ +
Sbjct: 546 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 605
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LA EM RG + T T+LI C++ +++A + +M + G+ P YLT K
Sbjct: 606 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 665
Query: 360 LNDEF 364
L F
Sbjct: 666 LVKGF 670
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 156/376 (41%), Gaps = 42/376 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I R G +E A E + + K S + L+ L +G VK Y
Sbjct: 243 TYNVVITGLTRKGDLEEAA---ELVEGMRLSKKASSFT--YNPLITGLLARGCVKKV--Y 295
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + ++ PTV YN +++G +S V+ A+ + EMR + P+V+TY +L+ GY
Sbjct: 296 DLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGY 355
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + A+ L ++R+ G+ P + YN IDG G EE + E P +
Sbjct: 356 CKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNV 415
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS-------------------------- 248
TYT L+KG L A + M+S+G P
Sbjct: 416 CTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREV 475
Query: 249 ---------PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
TYN K G ++DA L KM+ +G PD +TY L+ C+
Sbjct: 476 LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 535
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L A ++ M G T T++IH CR A F M+ G+ P+ +T+
Sbjct: 536 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 595
Query: 360 LNDEFKKRGMTALAQK 375
L + G T LA
Sbjct: 596 LIHALCRMGRTQLASH 611
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 156/389 (40%), Gaps = 70/389 (17%)
Query: 50 EAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT 108
+AA W A + +M++ + + LLDS K+GR + + + P
Sbjct: 181 DAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPN 240
Query: 109 VRVYNILLNGWFRSKNVKDAER----------------------------------FWLE 134
YN+++ G R ++++A LE
Sbjct: 241 DVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLE 300
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E + P VVTY ++ G + V+ A EMR G+ P+ I YN++++G +AG
Sbjct: 301 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 360
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN- 253
+E + PT++TY + GYC+ GDLE A + + M +G LP+ TY
Sbjct: 361 LKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 420
Query: 254 ----------------YFFRYFSK------------------FGKVEDAMNLYRKMIESG 279
+F SK G + A+ L ++ G
Sbjct: 421 LMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEG 480
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ D +TY+IL+ LCK L A ++ +M G D T T LIH C EA
Sbjct: 481 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 540
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
F +MI GL+P +TF + + +RG
Sbjct: 541 KIFNNMISDGLLPSAVTFTVIIHAYCRRG 569
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 9/311 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ L ++G ++ A+E + ++ + T YN L+ G VK LE
Sbjct: 244 YNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT---YNPLITGLLARGCVKKVYDLQLE 300
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E + P VVTY ++ G + V+ A EMR G+ P+ I YN++++G +AG
Sbjct: 301 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 360
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + PT++TY + GYC+ GDLE A + + M +G LP+ TY
Sbjct: 361 LKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 420
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE---DKLDLAIQVSKEMK 311
+ + A + +M+ G PD Y+ + C E + A+++ + +
Sbjct: 421 LMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGDIARALELREVLM 477
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
G D T +LIH LC+ +A M+ GL P +T+ L +RG+
Sbjct: 478 LEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLR 537
Query: 372 LAQKLCNVMSS 382
A+K+ N M S
Sbjct: 538 EARKIFNNMIS 548
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
R+ AP V+ N +L + D EM + + P++VTY TL++ + +
Sbjct: 158 REMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKE 217
Query: 158 RRVDRAIRLVKEM--RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R D+ L+KEM R G PN + YN VI GL G EE + ++E + + +
Sbjct: 218 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF- 276
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY L+ G G ++ + M + G +P+ TYN + G VE A + +M
Sbjct: 277 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 336
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD +TY+ LL CK L A+ + +++ G + T + I CR+
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDL 396
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
+EA E+M +G +P+ T+ L
Sbjct: 397 EEARILKEEMGEQGCLPNVCTYTIL 421
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 5/238 (2%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM V P+V ++ R D + +EM + GIEP+ + YNT++D ++ G
Sbjct: 159 EMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEG 218
Query: 194 RFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILK-MMISRGFLPSPT 250
R ++V+ +++ G P VTY ++ G + GDLE A+++++ M +S+ S
Sbjct: 219 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKK--ASSF 276
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN G V+ +L +M G P +TY+ ++ L + ++ A EM
Sbjct: 277 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 336
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ G D+ T L++ C+ EA F D+ R GL P LT+ D + + G
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+EM G+ P+ N V+ L +A R++++ + E L P++VTY +L+ + K
Sbjct: 158 REMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKE 217
Query: 228 GDLEGASKILKMMISR--GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G + + +LK M +R G LP+ TYN ++ G +E+A L M S
Sbjct: 218 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSF 276
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ L+ L + + EM+ G + T +IH L + + A +F +M
Sbjct: 277 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 336
Query: 346 IRRGLVPHYLTFKRLNDEFKKRG 368
GL+P +T+ L + + K G
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAG 359
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K A L + + PD + T+ LI + G++ A F N
Sbjct: 491 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCI---TYTCLIHAHCERGLLREARKIF---N 544
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N+ + A F +++ + C++G + +A +F RK L++ P YN+L++
Sbjct: 545 NM-ISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWF--RKMLEEGVEPNEITYNVLIHALC 601
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + A + EM + + N TY L++G C++ + A+R EM + GI P+ +
Sbjct: 602 RMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYL 661
Query: 181 VYNTVIDG 188
+ ++ G
Sbjct: 662 THKALVKG 669
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 163/315 (51%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNXLFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKX 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLD 350
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 136/306 (44%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 173/380 (45%), Gaps = 9/380 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K E D A +L + PD T+ ILI + + G VE ++ E
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVY---TYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M + S +SLF LCK+ + + F + T Y+IL+ G+
Sbjct: 388 YSNMEPSLVSYSSLFH----GLCKKRLSDISLDIFRDLGAAGYKYDQTA--YSILIKGFC 441
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ A + EM + N+ P+ + +LV G+C++ A+ M + GI P+
Sbjct: 442 MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIA 501
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N +ID GR EE +M P + TY +++ CK E A ++ +M
Sbjct: 502 TCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLM 561
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ R LPS Y+ F+K + A+ LY +M++ G TPD + Y IL+ ILC ++
Sbjct: 562 LKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRM 621
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + K+M G D + T +I CR+ +A A F +M++RG +P +T+ L
Sbjct: 622 CEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSL 681
Query: 361 NDEFKKRGMTALAQKLCNVM 380
D + K +A L + M
Sbjct: 682 VDGYCKMNRIDIADMLIDEM 701
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 8/329 (2%)
Query: 33 KDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAA 91
+ + ILI+ + G +++A E +MV+N S FE L+ CK G A
Sbjct: 430 QTAYSILIKGFCMQGDLDSAHKLME-----EMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E+F+ L+ P++ N++++ R V++A EM+ + + PN+ TY ++
Sbjct: 485 LEFFNMM--LEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVI 542
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
C+ R+ +RA+ L M K + P+ +VY+T+IDG + ++ + R L
Sbjct: 543 NRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVT 602
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P MV YT L+ C + A + K M G P +Y F + G + A L
Sbjct: 603 PDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWAL 662
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ +M++ G+ P +TY L+ CK +++D+A + EMK +G D+ T +LI R
Sbjct: 663 FNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRR 722
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+A +M G++P ++T+ L
Sbjct: 723 RGNLDKALEMLNEMKENGVLPDHMTYMML 751
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 157/329 (47%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK + DSA L+ + + + PD F L+ + + G+ A+ F
Sbjct: 436 LIKGFCMQGDLDSAHKLMEEMVRNNLAPD---PSNFESLVHGFCKMGLWVNALEFF---- 488
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N+ + + +++D+ C++GRV+ A ++ + Q P + YN ++N
Sbjct: 489 NMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT--QGIFPNLFTYNAVINRLC 546
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + + A + M K NV P+VV Y TL++G+ + +A+ L M K G+ P+ +
Sbjct: 547 KERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMV 606
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I+ L R E + ++ P ++YTS++ G+C+ GD+ A + M
Sbjct: 607 AYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEM 666
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ RG LP+ TY + K +++ A L +M G TPD +TY++L+ + L
Sbjct: 667 LQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNL 726
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
D A+++ EMK G D T ML LL
Sbjct: 727 DKALEMLNEMKENGVLPDHMTYMMLEWLL 755
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 153/354 (43%), Gaps = 12/354 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F +LI+ +A M+E A+ F A + LL L + R +
Sbjct: 181 VFDLLIKVFAANSMLENAVDVFLQAKK----TGLELSTRSCNFLLKCLAEANRREFLRSL 236
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSK------NVKDAERFWLEMRKENVTPNVVTYG 148
F + K P V Y I++N + + + + A EM + +P VVTY
Sbjct: 237 FEEMKS--TGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T + G CR+ V+ A+ V+ + N YN +I GL + G +E ++E C
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + TY+ L+ G+CK GD+E +++ M PS +Y+ F K + +
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
++++R + +GY D+ Y IL+K C + LD A ++ +EM D L+H
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHG 474
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
C+M + A F M+ G++P T + D + G A L N M +
Sbjct: 475 FCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 50/372 (13%)
Query: 74 LFEILLDSLCKQGRVKA-ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ +L D +C +V A E F E + A +V V+++L+ + + +++A +
Sbjct: 143 VYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVF 202
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
L+ +K + + + L++ R + L +EM+ G PN Y T++
Sbjct: 203 LQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTY-TIMMNFYCK 261
Query: 193 GRFEE-------VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
G F E + ++E PT+VTY++ + G C+ G +E A ++ +IS
Sbjct: 262 GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANG 321
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
L + YN K G++++A+ + +M G +PD TY IL+ CK+ ++ +
Sbjct: 322 LVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLY 381
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRM-----------------YKFDE----------- 337
+ +EMK + L + + L H LC+ YK+D+
Sbjct: 382 LIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFC 441
Query: 338 -------ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVP 384
A E+M+R L P F+ L F K G+ A + N+M S+
Sbjct: 442 MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIA 501
Query: 385 RSMELLDSRCKD 396
++D+ C++
Sbjct: 502 TCNVIIDAHCRE 513
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 102/271 (37%), Gaps = 63/271 (23%)
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC----------- 208
V R I+ M+K G + + TV++ L AG EV ++ R +VC
Sbjct: 105 VARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALL-RDIVCYYNKVNLDAFE 163
Query: 209 ----------EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ +++ + L+K + LE A + G S + N+ +
Sbjct: 164 LFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKC 223
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK----EDKLDL--AIQVSKEMKC 312
++ + E +L+ +M +G P+ TY I++ CK E +D A ++ +EM+
Sbjct: 224 LAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER 283
Query: 313 RG---------------CDIDLDTSTM--------------------LIHLLCRMYKFDE 337
G C + S + +IH LC+ + DE
Sbjct: 284 NGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDE 343
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
A E+M G+ P T+ L F K+G
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQG 374
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 12/368 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI + R + A+ L N + +SL L+ C R+ A
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL----LNGYCHSKRISEAVAL 173
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P +N L++G F +A M + P++VTYG +V G
Sbjct: 174 VDQM--FVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ D A L+ +M + +EP ++Y T+IDGL + ++ + + P +
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY+SL+ C G AS++L MI R P T++ F K GK+ +A LY +
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M++ P +TY L+ C D+LD A Q+ + M + C D+ + + LI C+ +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS--VPRSM----E 388
DE F +M +RGLV + +T+ L + G +AQ++ M S VP ++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 389 LLDSRCKD 396
LLD CK+
Sbjct: 472 LLDGLCKN 479
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 153/294 (52%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G A +K ++ P V +Y +++G ++K++ DA + E
Sbjct: 224 YGVVVNGLCKRGDTDLAFILLNKMEQ--GKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I P+ ++ +ID V+ G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P++VTY+SL+ G+C L+ A ++ + M+S+ P +Y+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +V++ M L+R+M + G + +TY L++ L + D+A ++ KEM G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T L+ LC+ K ++A FE + R + P T+ + + K G
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 24/376 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K D A L + P+ V+ + + + Y R W+
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR--------WSDASRL 313
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ + + F L+D+ K+G++ A + + + + +S P++ Y+ L+NG+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGF 371
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +A++ + M ++ P+VV+Y TL++G+C+ +RVD + L +EM + G+ N
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y T+I GL +AG + + + + P ++TY +L+ G CK G LE A + +
Sbjct: 432 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ P+ TYN K GKVED +L+ + G PD + Y+ ++ C++
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD-EASAEFEDMIRR---------- 348
+ A + KEMK G + LI R+ D EASAE +R
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIR--ARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 349 GLVPHYLTFKRLNDEF 364
GLV + L RL+ F
Sbjct: 610 GLVTNMLHDGRLDKSF 625
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 172/350 (49%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +++ + G + A F N ++ K + G ++ ++D LCK
Sbjct: 219 PDLV---TYGVVVNGLCKRGDTDLA---FILLNKMEQGK-LEPGVLIYTTIIDGLCKNKH 271
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F KE++ + P V Y+ L++ DA R +M + + P+V T
Sbjct: 272 MDDALNLF---KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A +L EM K I+P+ + Y+++I+G R +E M E +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +V+Y++L+KG+CKA ++ ++ + M RG + + TY + + G +
Sbjct: 389 SKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCD 448
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A ++++M+ G P+ +TY+ LL LCK KL+ A+ V + ++ + + T ++I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++ F ++ +G+ P + + + F ++G A L
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+ + N TY L+ +CR ++ A+ ++ +M K G EPN + +++++G +
Sbjct: 106 QMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R E ++++ V P VT+ +L+ G A ++ M+++G P TY
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYG 225
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G + A L KM + P L Y ++ LCK +D A+ + KEM+ +
Sbjct: 226 VVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T + LI LC ++ +AS DMI R + P TF L D F K G A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 374 QKLCNVMSSVPRSME 388
+KL + M V RS++
Sbjct: 346 EKLYDEM--VKRSID 358
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+GL E + ++ + + P P+++ ++ L+ K + + + M + G
Sbjct: 55 NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
+ TY+ F + ++ A+ + KM++ GY P+ +T LL C ++ A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+M G + T LIH L K EA A + M+ +G P +T+ + + K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 367 RGMTALAQKLCNVM 380
RG T LA L N M
Sbjct: 234 RGDTDLAFILLNKM 247
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 9/328 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++ Y RAG +E A L F F L+ +LC +GRV A
Sbjct: 132 TYNTMVNGYCRAGRIEDA-------RRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAV 184
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F L + +P+V Y+ILL+ ++ + A EMR + P++VTY L+
Sbjct: 185 FDDM--LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAM 242
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C VD A+ ++ ++ G +P+A+ Y V+ L + R++EV + + P
Sbjct: 243 CNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDE 302
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+ ++V C+ G ++ A K++ M G +P TY+ G+V+DA+ L +
Sbjct: 303 VTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ G PD + Y +LK LC ++ + A ++ EM C C D T +I LC+
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLND 362
D A E M G P +T+ + D
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIID 450
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 2/307 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++++C +G V A P Y +L S+ K+ E + E
Sbjct: 235 YNVLINAMCNEGDVDEALNILSDLPS--HGCKPDAVTYTPVLKSLCGSERWKEVEELFAE 292
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+ VT+ T+V C+ VDRAI++V M + G P+ + Y++++DGL + GR
Sbjct: 293 MASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ R P + YT+++KG C E A +++ M+ P T+N
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G V+ A+ + +M E+G PD +TY+ ++ LC E +D A+++ ++ G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C D+ T L+ LC + ++++A +M+ P TF + ++G+ A
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532
Query: 375 KLCNVMS 381
+ +M+
Sbjct: 533 ETLKIMA 539
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 164/398 (41%), Gaps = 77/398 (19%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V TF ++ + G+V+ AI + + + + + +S+ LD LC GR
Sbjct: 300 PDEV---TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSI----LDGLCDVGR 352
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A E + K P Y +L G + + AE EM + P+ VT+
Sbjct: 353 VDDAVELLSRLKSY--GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTF 410
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV----------------- 190
T++ C+ VDRAI++V++M + G P+ + YN++IDGL
Sbjct: 411 NTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQS 470
Query: 191 ------------------EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
R+E+ +M + + P T+ +++ C+ G L
Sbjct: 471 YGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQ 530
Query: 233 ASKILKMMISRGFLPSPTTYNYF---------------------------------FRYF 259
A + LK+M G +P+ +TYN
Sbjct: 531 AIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNI 590
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
+K GK+E+A++L R M+ +G +PD +TY L +C+ED D AI++ ++ G D
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDA 650
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++ C+ ++ D A F M+ G +P T+
Sbjct: 651 TFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTY 688
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 144/337 (42%), Gaps = 37/337 (10%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF----- 131
IL+ LC GRV A F + TV YN ++NG+ R+ ++DA R
Sbjct: 103 ILIKRLCSGGRVADAERVFATL-----GASATVVTYNTMVNGYCRAGRIEDARRLISGMP 157
Query: 132 ---------------------------WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ +M +P+VVTY L++ C+ +A+
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ EMR +G EP+ + YN +I+ + G +E ++ P VTYT ++K
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
C + + ++ M S P T+N + G V+ A+ + M E G PD
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDI 337
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY +L LC ++D A+++ +K GC D T ++ LC + +++ A +
Sbjct: 338 VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAE 397
Query: 345 MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
M+ P +TF + ++G+ A K+ MS
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 31/365 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L ++++ A L+ + + PD V TF +I + G+V+ AI E +
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEV---TFNTVIASLCQKGLVDRAIKVVEQMS 434
Query: 61 ----NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNI 114
N D+V + ++D LC + + A E QS+ P + +N
Sbjct: 435 ENGCNPDIVT--------YNSIIDGLCNERCIDDAMELLSNL----QSYGCKPDIVTFNT 482
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
LL G +DAE+ + M + P+ T+ T++ C+ + +AI +K M + G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 175 IEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
PN YN V+D L++AG+ +E +SGM P ++TY +++ KAG +
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT------PDLITYNTVISNITKAGKM 596
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A +L++M+S G P TY + + A+ + ++ + G +PD Y+ +
Sbjct: 597 EEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDI 656
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L C+ + D+AI M GC D T +L+ L DEA ++ G+
Sbjct: 657 LLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716
Query: 351 VPHYL 355
+ L
Sbjct: 717 LDKSL 721
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 134/308 (43%), Gaps = 4/308 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++ SLC+QG V A + E P + Y+ +L+G V DA
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSE--HGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
++ P+ + Y T+++G C + + + A L+ EM P+ + +NTVI L + G
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++E+ P +VTY S++ G C ++ A ++L + S G P T+N
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + EDA L M+ S PD T++ ++ LC++ L AI+ K M G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C + T +++ L + K EA M P +T+ + K G A
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEAL 600
Query: 375 KLCNVMSS 382
L VM S
Sbjct: 601 DLLRVMVS 608
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VV L++ C RV A R+ + G + YNT+++G AGR E+
Sbjct: 98 VVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDA----R 150
Query: 204 RFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
R + P P T+ L++ C G + A + M+ RG PS TY+ K
Sbjct: 151 RLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKA 210
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
AM L +M G PD +TY++L+ +C E +D A+ + ++ GC D T
Sbjct: 211 SGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTY 270
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T ++ LC ++ E F +M P +TF + ++G+ A K+ + MS
Sbjct: 271 TPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS 329
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 163/314 (51%), Gaps = 47/314 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
++L ++ L+ +CK+G+L+ A+ +LK MI Y F K G
Sbjct: 284 KYLAPTDNSIIM---RLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAG 340
Query: 264 KVEDAMNLYRKMIE 277
+ + A+ L K+IE
Sbjct: 341 QYDKAVKLLDKLIE 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM-LIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + ++ M LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGLLIENFCKAGQYDKAVKLLD 350
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCK 303
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT + L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIIMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN++I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNSMIEYLCNNGQASKAETLVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 148/302 (49%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL SLC QG+ A + E +P V YN +++G+F+ +V A + E
Sbjct: 198 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 257
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P++VTY ++V C+ R +D+A +++M + + PN YN +I G G+
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 317
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E + + P +VT + L+ CK G ++ A + M +G P +YN
Sbjct: 318 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + D +L+ M+ G PD T+++L+K LD A+ + EM+ G
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T +I LCR+ K D+A +F MI +G+ P + L F G A+
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 497
Query: 375 KL 376
+L
Sbjct: 498 EL 499
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 9/374 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA+ D A L + +P+ T+ LI Y+ G + A+ F+
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPN---NWTYNNLIYGYSSTGQWKEAVRVFKEMR 329
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + + +L+ SLCK G++K A + F Q+ P V YNI+LNG+
Sbjct: 330 RHSILPDVVT----LSMLMGSLCKYGKIKEARDVFDTMAMKGQN--PDVFSYNIMLNGYA 383
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ D + M + + P+ T+ L++ Y +D+A+ + EMR G++P+ +
Sbjct: 384 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 443
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y TVI L G+ ++ + + P Y L++G+C G L A +++ +
Sbjct: 444 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 503
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++ G ++ K G+V DA N++ + G PD + Y +L+ C K+
Sbjct: 504 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM 563
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A++V M G + ++ L++ C++ + DE + F +M++RG+ P + + +
Sbjct: 564 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 623
Query: 361 NDEFKKRGMTALAQ 374
D + G T A+
Sbjct: 624 IDGLFQAGRTVPAK 637
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 172/361 (47%), Gaps = 9/361 (2%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
+G PDF TF +LI+ YA GM++ A+ F + + ++ +
Sbjct: 399 LGDGIAPDFY---TFNVLIKAYANCGMLDKAMIIFNEMRD----HGVKPDVVTYRTVIAA 451
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC+ G++ A E F++ +DQ AP YN L+ G+ ++ A+ E+ +
Sbjct: 452 LCRIGKMDDAMEKFNQM--IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
++V + +++ C+L RV A + G+ P+A+VY+ ++DG G+ E+ +
Sbjct: 510 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + P +V Y +LV GYCK G ++ + + M+ RG PS Y+ +
Sbjct: 570 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 629
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G+ A + +M ESG D TY+I+L+ L K D AI + KE++ I++ T
Sbjct: 630 AGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 689
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+I + + + +EA F + R LVP+ +T+ + K G+ A+ + + M
Sbjct: 690 LNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQ 749
Query: 382 S 382
+
Sbjct: 750 N 750
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 176/377 (46%), Gaps = 27/377 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L + + D A I PD K + LI+ + G +++A E
Sbjct: 448 VIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYNCLIQGFCTHGSLLKAKELISEIM 504
Query: 60 NN---LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
NN LD+V F ++++LCK GRV A F ++ P VY++L+
Sbjct: 505 NNGMHLDIV--------FFSSIINNLCKLGRVMDAQNIFDL--TVNVGLHPDAVVYSMLM 554
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ ++ A R + M + PNVV Y TLV GYC++ R+D + L +EM + GI+
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGAS 234
P+ I+Y+ +IDGL +AGR V M+ + E G M TY +++G K + A
Sbjct: 615 PSTILYSIIIDGLFQAGR--TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ K + + + T N + +VE+A +L+ + S P+ +TY I++ L
Sbjct: 673 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNL 732
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGLV 351
KE ++ A + M+ GC+ S +L H++ + K +E A A + R
Sbjct: 733 IKEGLVEEAEDMFSSMQNAGCE---PNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 789
Query: 352 PHYLTFKRLNDEFKKRG 368
+LT L D F +G
Sbjct: 790 LEHLTAMLLVDLFSSKG 806
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 9/304 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A+L + C+ G A + + R + + +PT Y IL++ R+ + A
Sbjct: 85 AALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELAL 144
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDG 188
F+ ++ + + N++ L+EG+C +R D A+ ++ E G P+ Y+ ++
Sbjct: 145 AFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 204
Query: 189 LVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
L + G+ + M E VC P +V Y +++ G+ K GD+ A + K M+ RG
Sbjct: 205 LCDQGKSGQADDLLRMMAEGGAVCS--PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 262
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TYN K ++ A R+M+ P+ TY+ L+ + A+
Sbjct: 263 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 322
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V KEM+ D+ T +ML+ LC+ K EA F+ M +G P ++ + + +
Sbjct: 323 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 382
Query: 365 KKRG 368
+G
Sbjct: 383 ATKG 386
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 18/316 (5%)
Query: 18 LLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
L +++ G + +P+ V TF IL+ + GMV A FE K + +
Sbjct: 178 LFNEMAGRDAMPNTV---TFTILVDVLCKKGMVSEARCVFETMTE----KGVEPNIYTYN 230
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L++ C + + AS+ F + + AP+V Y+IL+NG+ +S+ + +A+ +M
Sbjct: 231 ALMNGYCLRLEMNDASKVFEIM--VGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMS 288
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++ + PN VTY TL++G C + A L K+M G+ PN Y+ ++DGL + G E
Sbjct: 289 EKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLE 348
Query: 197 E----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
E ++ M ER L P +V Y L++G AG LE A ++ + + G PS TY
Sbjct: 349 EALKLLTSMQERKL----EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTY 404
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + K G ++A L+RKM + G+ PD +Y+++++ + AIQ+ EM
Sbjct: 405 NIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVG 464
Query: 313 RGCDIDLDTSTMLIHL 328
R D T ML+ L
Sbjct: 465 RRFSADSSTFKMLLDL 480
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%)
Query: 5 LAKAKEFDS--AWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+AK K++ + + C +D G H D+ T ILI R + A+
Sbjct: 96 IAKKKQYSTVVSLCNQMDLFGVAHN--DY----TLNILINSLCRLSHIHFAVSVLSKMFK 149
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
L + + + F L++ LC +GR+K A E F++ D P + IL++ +
Sbjct: 150 LGIQPD----SVTFTTLINGLCNEGRIKEAVELFNEMAGRD--AMPNTVTFTILVDVLCK 203
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
V +A + M ++ V PN+ TY L+ GYC ++ A ++ + M +G P+
Sbjct: 204 KGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHS 263
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y+ +I+G ++ R +E ++ + E P VTY +L++G C A L A ++ K M
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMC 323
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S G LP+ TY+ K G +E+A+ L M E PD + Y+IL++ + KL+
Sbjct: 324 SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLE 383
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
+A ++ ++ G + T ++I L + DEA F M G +P ++ +
Sbjct: 384 VAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVII 443
Query: 362 DEFKKRGMTALAQKLCNVM 380
F + + A +L + M
Sbjct: 444 QGFLQNQDPSTAIQLIDEM 462
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 18/283 (6%)
Query: 117 NGWFRSKN-----VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
NG F S N + DA + M N P+ V G + + ++ + L +M
Sbjct: 54 NGGFVSNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMD 113
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
G+ N N +I+ L ++ + P VT+T+L+ G C G ++
Sbjct: 114 LFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIK 173
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A ++ M R +P+ T+ K G V +A ++ M E G P+ TY+ L+
Sbjct: 174 EAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALM 233
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
C +++ A +V + M +GC + + ++LI+ C+ + DEA A M + L+
Sbjct: 234 NGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELI 293
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
P+ +T+ L Q LC+ SS+ + EL C
Sbjct: 294 PNTVTY------------NTLMQGLCHA-SSLLEAQELFKKMC 323
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V +N LL+ + V+++ER ++ K+ + N+ T+ ++G CR + A+ +
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ + +EG+ P+ + YNT+I GL + E + + + P TY +L+ GYCK
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A KIL+ I +GF+P TY + +++ A+ L+ + G P +
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y++L+K LC+E + A+Q+ EM GC D+ T ++I+ LC+M +A+ D I
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453
Query: 347 RRGLVPHYLTFKRLNDEFKKR 367
+G VP TF L D + K+
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQ 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 6/339 (1%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F TF L+ + G V+ + E N + K S F I + LC++G +
Sbjct: 213 FPDVSTFNKLLHTLCKKGEVQES----ERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + + P V YN L+ G ++ NV +AE++ ++ + P+ TY T
Sbjct: 269 GAMSMLDSV--IREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNT 326
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++GYC++ + A ++++ +G P+ Y ++I+GL + + + L
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT++ Y L+KG C+ G + A +++ M G TYN K G V DA
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN 446
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
NL I GY PD T++ L+ CK+ K++ IQ+ +M G D+ T +++ L
Sbjct: 447 NLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL 506
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ K ++ FE M+ +G VP+ +T+ L + K G
Sbjct: 507 SKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAG 545
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + T+ LI + ++ A+ F N + K L+ +L+ LC++G
Sbjct: 353 VPD---EFTYCSLINGLCQNDEIDRALALF----NAALGKGLKPTVILYNMLIKGLCQEG 405
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + ++ E + + YN+++NG + V DA + + P+V T
Sbjct: 406 LILQALQMMNEMSE--NGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFT 463
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF- 205
+ TL++GYC+ +++ I+++ +M G+ P+ I YN+V++GL +A + E+ +ME F
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED---LMETFE 520
Query: 206 LVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ E G P +TY L + CKAG + A ++ ++++G P ++ F+ G
Sbjct: 521 TMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNG 580
Query: 264 KVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
++ A L+R+M E + TY+I++ ++ L + ++ EM GC D T
Sbjct: 581 DLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTY 640
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++I C D +MI +G +P TF R+
Sbjct: 641 RVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRV 678
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 163/384 (42%), Gaps = 60/384 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV--KNFDSGASLFEILLDSLCKQGRVKAAS 92
TF I I+ R GM+ A+ LD V + + L+ LCK V A
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSM------LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAE 306
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+Y HK ++ P YN L++G+ + +++AE+ + P+ TY +L+
Sbjct: 307 KYLHKL--VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLIN 364
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL------ 206
G C+ +DRA+ L +G++P I+YN +I GL + G + MM
Sbjct: 365 GLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSS 424
Query: 207 -----------VCEPG------------------PTMVTYTSLVKGYCKAGDLEGASKIL 237
+C+ G P + T+ +L+ GYCK +E +IL
Sbjct: 425 DIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQIL 484
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M S G P TYN SK K ED M + M+E G P+++TY+IL + LCK
Sbjct: 485 NKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKA 544
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K++ A+ + E+ +G I DT + F + F + L Y F
Sbjct: 545 GKVNEALDLVDEILNKG--ITPDTVS-----------FATIISGFAN--NGDLKGAYQLF 589
Query: 358 KRLNDEFKKRGMTALAQKLCNVMS 381
+R+ +++K TA + N +
Sbjct: 590 RRMGEQYKVSHTTATYNIMINAFA 613
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 148/338 (43%), Gaps = 37/338 (10%)
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ S ++G+V+ A + F + + P+V YN ++N S K A + +L M+
Sbjct: 83 MKSYGRKGKVQEAVDVFERMDFYN--CEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNV 140
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL------VEA 192
+ P+V T+ ++ +CR +R A+RL+ M +G + NA+ Y TV+ G VEA
Sbjct: 141 GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEA 200
Query: 193 ----------GRFEEVSGMMERF-LVCEPG------------------PTMVTYTSLVKG 223
G F +VS + +C+ G + T+ ++G
Sbjct: 201 YELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG 260
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
C+ G L GA +L +I G P TYN K V +A K++ G PD
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
TY+ L+ CK L A ++ + C+G D T LI+ LC+ + D A A F
Sbjct: 321 GFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFN 380
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ +GL P + + L + G+ A ++ N MS
Sbjct: 381 AALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 140/349 (40%), Gaps = 43/349 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
+I L + E D A L +G P + + +LI+ + G++ A
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVI---LYNMLIKGLCQEGLILQALQMMNEMS 418
Query: 53 -------IWTFEF-------------ANNL---DMVKNFDSGASLFEILLDSLCKQGRVK 89
IWT+ ANNL + K + F L+D CKQ +++
Sbjct: 419 ENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKME 478
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+ +K P V YN +LNG ++ +D + M ++ PN +TY
Sbjct: 479 TTIQILNKM--WSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGRFEEVSGMMERF 205
L E C+ +V+ A+ LV E+ +GI P+ + + T+I G G ++ M E++
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
V T TY ++ + + DL K+ M + G P TY F G
Sbjct: 597 KVSH---TTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNT 653
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ +MIE G+ P T+ ++ LC + ++ A+ + M G
Sbjct: 654 DSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNG 702
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KA + + A L+ + + PD VS F +I +A G ++ A F
Sbjct: 541 LCKAGKVNEALDLVDEILNKGITPDTVS---FATIISGFANNGDLKGAYQLFRRMGEQYK 597
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
V + + + I++++ ++ + + F + AP Y ++++G+ + N
Sbjct: 598 VSH---TTATYNIMINAFAEKLDLHMGEKLFLEMGA--GGCAPDTYTYRVMIDGFCITGN 652
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+F LEM ++ P++ T+G ++ C RV A+ ++ M GI P +
Sbjct: 653 TDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 141/285 (49%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ S CK+G ++ A F + W P+V +N L+NG+ + ++ + R
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVF----DAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M+ V P+V TY L+ G C+ ++D A L EM G+ PN++ + T+IDG +
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 254 DGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G ++ T TM+I+ C+ S ++M R G VP +T
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 6/345 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + ++ A+ + + K + P+VV++ TL+ GY
Sbjct: 125 --EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+L ++ RL M+ G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
++T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM 407
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ +C+ + A + + K G+ P+ + +NT+++G ++ G E +
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + TY+ L+ G CK L+ A+++ M+ G +P+ ++ K G+V+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVD 258
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM +Y++M+ +PD +TY+ L+ LCK L A + EM +G D T T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLI 318
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
C+ + A + MI+ + + + L + G + A+K+ M SV
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK G++ A + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS ++N + K G + + L M SG PD TY +L+ LCKE KLD A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDAN 226
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ EM G + + T LI C+ + D A ++ M+ + L P +T+ L
Sbjct: 227 ELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 365 KKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
K G AQ L N MS P + L+D CK+
Sbjct: 287 CKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKE 324
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 195/420 (46%), Gaps = 46/420 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y G+V+ ++ F+ +
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVLMIDSYGNGGIVQESVKLFQKMD 107
Query: 61 NLDMVKNFDSGASLFE-------------------------------ILLDSLCKQGRVK 89
L + + S +LF+ I++ G+V+
Sbjct: 108 ELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVE 167
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A+ +F K ++ P V YN ++NG++R K +++AE++++EM+ N+ P VVTY T
Sbjct: 168 TANRFFEDMK--NREITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTT 225
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++GY + +VD A+RLV+EM+ GI+ NAI Y+T++ GL A + E +++ +
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKY 285
Query: 210 PGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
PT + L+ G CKAG+L+ A+ +LK MI Y + K G+ + A
Sbjct: 286 IAPTDNSIFMRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQA 345
Query: 269 MNLYRKMIE--------SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ L K+IE S + Y+ L+ LC + A + +++ G D
Sbjct: 346 VKLLDKLIEKDIILRPQSTLHMESSAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQ-DPT 404
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LI + D A + M+RR + + L + KR A A+ + M
Sbjct: 405 ALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKRSEPADAKAALDSM 464
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGAKNSEHALQFFRWVE-RSNLFQHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID G +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M TPD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ + +T+ L N E + L + + ++ S M L+ +CK
Sbjct: 250 GIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCK 303
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 137/304 (45%), Gaps = 21/304 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++G
Sbjct: 248 GYGIKAN----AITYSTLLPGLCNAEKMSEARSIL--KEMVDKYIAPTDNSIFMRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI--EP 177
++ N+ A M + +V YG L+E YC+ + D+A++L+ ++ ++ I P
Sbjct: 302 CKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRP 361
Query: 178 NAIV------YNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDL 230
+ + YN +I L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHMESSAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQDPTALN--TLIRGHSQEGSP 419
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD + +
Sbjct: 420 DSAFELLKIMLRRKVDSEKSAYDSLVQSYLKRSEPADAKAALDSMIENDHLPDSSLFRSV 479
Query: 291 LKIL 294
++ L
Sbjct: 480 MESL 483
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 155/318 (48%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ + A + FE + KN + ++++ C+ G V+ ASE
Sbjct: 139 TYTILVDGLSAARDITKVEAVFEEMKS----KNLSGDVYFYSSVINAYCRAGNVRRASEV 194
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + P Y L+NG+ + ++ AE +M+ V N + + T+++GY
Sbjct: 195 FDEC--VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR VD+A+ + M K GIE + YNT+ GL A R +E ++ + P
Sbjct: 253 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 312
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+YT+L+ +C GD+ A ++ + M G PS TYN + K G + +A +
Sbjct: 313 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNE 372
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G PD +Y L+ C K+D+A+++ +EMK RG +L T LI L + +
Sbjct: 373 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 432
Query: 335 FDEASAEFEDMIRRGLVP 352
+EA +++M+ GL P
Sbjct: 433 SEEAFQLYDNMLGDGLTP 450
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 8/353 (2%)
Query: 8 AKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
A D+A LL K PD V+ + +++ Y ++G V A + + N
Sbjct: 44 AGHLDTAADLL--KQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVN 101
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
A + LLD+ ++ +E + ++ PTV Y IL++G ++++
Sbjct: 102 ----ALCYNSLLDAYTREKDDDRVAEMLKVME--NEGIEPTVGTYTILVDGLSAARDITK 155
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
E + EM+ +N++ +V Y +++ YCR V RA + E GIEPN Y +I+
Sbjct: 156 VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALIN 215
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G + G+ E ++ V G + + +++ GYC+ ++ A +I +M G
Sbjct: 216 GFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIEL 275
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TYN + ++++A NL R MIE G P+ ++Y L+ I C E + A ++
Sbjct: 276 DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLF 335
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+EM G + L T +++ + EA +M ++GLVP ++ L
Sbjct: 336 REMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAAL 388
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 152/309 (49%), Gaps = 8/309 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L + F + K ++ + V Y+ ++N + R+ NV+ A + E
Sbjct: 140 YTILVDGLSAARDITKVEAVFEEMKS--KNLSGDVYFYSSVINAYCRAGNVRRASEVFDE 197
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ PN TYG L+ G+C++ +++ A LV +M+ G+ N IV+NT+IDG
Sbjct: 198 CVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNM 257
Query: 195 FE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ E+ +ME+ + + TY +L G +A ++ A +L++MI +G P+ +
Sbjct: 258 VDKALEIKMIMEKMGI---ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 314
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y G + +A L+R+M +G P +TY++++ K+ + A + EM+
Sbjct: 315 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 374
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ + L+H C K D A FE+M +RG P+ + + L K G +
Sbjct: 375 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 434
Query: 372 LAQKLCNVM 380
A +L + M
Sbjct: 435 EAFQLYDNM 443
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 16/276 (5%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFEILLDSLCKQGRVKA 90
++ T+ LI + + G +EAA DM V+ +F ++D C++ V
Sbjct: 206 NEHTYGALINGFCKIGQMEAAEMLV-----TDMQVRGVGINQIVFNTMIDGYCRKNMVDK 260
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E +++ V YN L G R+ + +A+ M ++ V PN V+Y TL
Sbjct: 261 ALEIKMIMEKMGIEL--DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 318
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFL 206
+ +C + A RL +EM G EP+ + YN ++DG ++ G E + M ++ L
Sbjct: 319 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGL 378
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V P + +Y +LV G+C G ++ A ++ + M RG P+ Y +K G+ E
Sbjct: 379 V----PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 434
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+A LY M+ G TPD Y L+ L + K ++
Sbjct: 435 EAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNV 470
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
++VTP ++ +V+GYC+ RV A +L+ EM + G++ NA+ YN+++D
Sbjct: 63 DSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDA--------- 111
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
Y + D + +++LK+M + G P+ TY
Sbjct: 112 --------------------------YTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 145
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
S + ++ +M + D Y ++ C+ + A +V E G +
Sbjct: 146 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 205
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T LI+ C++ + + A DM RG+ + + F + D + ++ M A ++
Sbjct: 206 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 265
Query: 378 NVM 380
+M
Sbjct: 266 MIM 268
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 140/285 (49%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ S CK+G ++ A F + W P+V +N L+NG+ + ++ + R
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVF----DAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M+ V P+V TY L+ G C+ ++D A L EM G+ PN + + T+IDG +
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A + MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G +++ T TM+I+ C+ S ++M R G VP +T
Sbjct: 374 SVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 13/383 (3%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+++ K DSA + +L+ G +V F LI Y +G + AI
Sbjct: 35 LIQIVVSRKGKDSASAVFAAILETRGTQRSDIYV----FSGLITAYLESGFLRDAIECXR 90
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FD+ + E L+ K K ++ + L+ + ++ +NIL++
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY--EESLECGYPASLYFFNILMH 144
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + ++ A+ + + K + P+VV++ TL+ GY +L ++ RL M+ G++P
Sbjct: 145 SFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I+GL + + ++ + + + L P VT+T+L+ G+CK G ++ A +I
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M+S+ P TYN K G ++ A +L +M G PD++TY L+ CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A + K M +D T LI LC+ + +A +M+ GL T+
Sbjct: 325 GDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTY 384
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ +EF K+G KL M
Sbjct: 385 TMIINEFCKKGDVWTGSKLMKEM 407
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ +C+ + A + + K G+ P+ + +NT+++G ++ G E +
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + TY+ L+ G CK ++ A+++ M+ G +P+ T+ K G+V+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRS 386
C+ + A + MI+ + + + L + G + A+K+ M SV
Sbjct: 319 DGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 387 MEL 389
+E+
Sbjct: 379 LEI 381
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 6/218 (2%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK G++ A + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS ++N + K G + + L M SG PD TY +L+ LCKE K+D A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ EM G + T T LI C+ + D A ++ M+ + L P +T+ L
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 365 KKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
K+G AQ L + MS P + L+D CK+
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKE 324
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 158/343 (46%), Gaps = 43/343 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ LC + R+ A++ F + ++L P V Y L+ G N+ A ++ E
Sbjct: 164 FTTLIKGLCVEHRIIEATKLFMRMQKL--GCTPNVVTYGTLIKGLCALGNINIALKWHQE 221
Query: 135 MRKE------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + N PNV++Y +++G C++ + AI L EM +G++PN + ++ +ID
Sbjct: 222 MLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDM 281
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + G+ + ++E + P + TYTSL+KG+C GDL A ++ M S+G+ P
Sbjct: 282 LCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPD 341
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI--------------- 293
+YN + K KVE+AM L+ +M+ G PD T +LLK
Sbjct: 342 VISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR 401
Query: 294 --------------------LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
LCK + A+++ E++ +D++T LI LC+
Sbjct: 402 VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAG 461
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
K + A FE + G+ P + + + F K+G A L
Sbjct: 462 KLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANIL 504
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 15/325 (4%)
Query: 86 GRVKAASEYF--HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+++ S+ F +K+ L W P + NIL+N + + + + P+
Sbjct: 102 AKIEHYSQVFSLYKQMHLAGLW-PDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPD 160
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VVT+ TL++G C R+ A +L M+K G PN + Y T+I GL G +
Sbjct: 161 VVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQ 220
Query: 204 RFL------VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
L V P +++Y+ ++ G CK G+ E A + M+ +G P+ T++
Sbjct: 221 EMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLID 280
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K G+V A L MI+ G P+ TY L+K C L+ A ++ M +G +
Sbjct: 281 MLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEP 340
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D+ + MLI+ C+ K +EA F +M+ G+ P T L G A++L
Sbjct: 341 DVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF 400
Query: 378 NVMS--SVPRSMEL----LDSRCKD 396
V+ ++P+ + + LD CK+
Sbjct: 401 RVIKPYAMPKDLCICCIFLDGLCKN 425
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 13/351 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K ++ A CL + + P+ V TF +LI + G V A E
Sbjct: 243 IIDGLCKVGNWEEAICLFNEMVDQGVQPNVV---TFSVLIDMLCKEGQVIKAKKLLEMMI 299
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +V N + SL + C G + +A E F + + P V YN+L+NG+
Sbjct: 300 QIGIVPNLFTYTSL----IKGFCLVGDLNSAKELFVSMP--SKGYEPDVISYNMLINGYC 353
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V++A + + EM + P+V T G L++ +VD A L + ++ + +
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLC 413
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +DGL + G E + + T+ L+ G CKAG LE A ++ + +
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P Y+ F K G+V+ A L++KM E+G +PD +TY IL++ + +KL
Sbjct: 474 YEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKL 533
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ +Q+ M + D ++ ++C+ DE E+ D+++R V
Sbjct: 534 EKVVQLLHRMIEKDVWPDDGIYAIVEDMVCK----DEKYKEWLDLLQRFFV 580
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 17/329 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
P+ +S + I+I + G E AI F +MV + F +L+D LCK+G
Sbjct: 235 PNVIS---YSIIIDGLCKVGNWEEAICLFN-----EMVDQGVQPNVVTFSVLIDMLCKEG 286
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+V A + ++ P + Y L+ G+ ++ A+ ++ M + P+V++
Sbjct: 287 QVIKAKKLLEMMIQI--GIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVIS 344
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ GYC+ +V+ A++L EM G+ P+ ++ L AG+ ++ E F
Sbjct: 345 YNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAK---ELFR 401
Query: 207 VCEP---GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
V +P + + G CK G + A K+ + S T+ K G
Sbjct: 402 VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAG 461
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K+E A L+ K+ E G PD + Y ++ CK+ ++D A + ++M+ GC DL T +
Sbjct: 462 KLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYS 521
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+L+ K ++ MI + + P
Sbjct: 522 ILMRGFYESNKLEKVVQLLHRMIEKDVWP 550
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 6/282 (2%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
++ +N LL G + ++ + +M + P+++T L+ C + R++ + +
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+ + G P+ + + T+I GL R E + + R P +VTY +L+KG C
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 228 GDLEGASKILKMMISR------GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G++ A K + M++ P+ +Y+ K G E+A+ L+ +M++ G
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ +T+ +L+ +LCKE ++ A ++ + M G +L T T LI C + + A
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
F M +G P +++ L + + K A KL N M V
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHV 371
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 225 CKAGDLE--GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
CK G + A + +M+ F ++N +K +LY++M +G P
Sbjct: 70 CKTGSISVTQAHQFFDLMMRSIF-----SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D LT +IL+ LC ++++ + + RG D+ T T LI LC ++ EA+ F
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
M + G P+ +T+ L +G+ AL
Sbjct: 185 MRMQKLGCTPNVVTYGTL-----IKGLCALGN 211
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 57 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLM----KLRYFKLVWGFY 112
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 113 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 171 RLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 230
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM 290
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 291 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQS 350
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 351 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 396
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 182 KSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 241
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + +R L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 242 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFT 301
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 302 YTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREML 361
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D+ T TM+I+ C+ + S ++M R G P +T+ L
Sbjct: 362 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVL 410
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 157 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LANGVQPDVYTYSVLINGLCKESK 209
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + M +++ P+++TY
Sbjct: 210 MDDANELFDEM--LVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITY 267
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ Y T+IDG + G + +R +
Sbjct: 268 NTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQ 327
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 328 ENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWK 387
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M +G+ P +TY++L+
Sbjct: 388 GSKLLKEMQRNGHAPSVVTYNVLM 411
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 154/342 (45%), Gaps = 9/342 (2%)
Query: 44 ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ 103
+R G A++ FA L+ S +F L+ + + G ++ A E + +E +
Sbjct: 29 SRKGKGSASV---VFATILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HK 84
Query: 104 SWAP--TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
W P T R +L + + K F+ E+ + ++ + L+ +C+ +
Sbjct: 85 LWVPFDTCRK---MLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIR 141
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A + + K G+ P+ + YNT+++G + G +E + L P + TY+ L+
Sbjct: 142 VAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLI 201
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G CK ++ A+++ M+ +G +P+ T+ K G+V+ AM +Y++M+
Sbjct: 202 NGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLL 261
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +TY+ L+ LCK L A + EM +G D T T LI C+ D A
Sbjct: 262 PDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKH 321
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ MI+ + + + L + G + A+K+ M SV
Sbjct: 322 RKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSV 363
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 9/223 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A L + + +P+ V TF LI + + G V+ A+ ++
Sbjct: 200 LINGLCKESKMDDANELFDEMLVKGLIPNGV---TFTTLIDGHCKNGRVDLAMEIYKRML 256
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ + + + L+ LCK G +K A + + + P Y L++G
Sbjct: 257 SQSLLPDLIT----YNTLIYGLCKNGDLKQAHDLIDEMSM--KGLKPDKFTYTTLIDGCC 310
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ A + M +EN+ + V Y L+ G C+ + A ++++EM G++P+
Sbjct: 311 KEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIG 370
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
Y +I+ + G + S +++ P++VTY L+ G
Sbjct: 371 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 186/385 (48%), Gaps = 14/385 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +L KAK++D + ++++ G ++ V+ +T ++RR+A AG E A+ F+
Sbjct: 126 VDILGKAKKWDRLK-VFVERMRGDKL---VTLNTIAKIMRRFAGAGEWEEAVGIFDKLGE 181
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ KN +S +LLD+LCK+ RV+ A EL P +NI ++GW +
Sbjct: 182 FGLEKNTES----MNLLLDTLCKEKRVEQARVVL---LELKSHITPNAHTFNIFIHGWCK 234
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ V++A EM+ P V++Y T++ YC+ + ++ EM G PN+I
Sbjct: 235 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQSEFVKVYEMLSEMEANGSPPNSIT 294
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM-M 240
Y T++ L FEE + R P + Y L+ ++G LE A ++ ++ M
Sbjct: 295 YTTIMSSLNAQKEFEEALRVATRMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVFRVEM 354
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY-TPDRLTYHILLKILCKEDK 299
G + +TYN + + + A+ L ++M S PD TY LL+ K
Sbjct: 355 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 414
Query: 300 LDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ ++ KEM + +D T T LI LCR + A FE+MI + + P + T
Sbjct: 415 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANICEWAYCLFEEMISQDITPRHRTCL 474
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
L +E KK+ M A+++ ++M +V
Sbjct: 475 LLLEEVKKKNMHESAERIEHIMKTV 499
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 157/297 (52%), Gaps = 6/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR---SKNVKDAERF 131
F +++++LCK G++ A + K +P V YN L++G+ + + + A+
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVY--GCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM + +V+PN+ T+ L++G+ + + ++++ KEM + ++PN I YN++I+GL
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E M ++ + P ++TY +L+ G+CK L+ A + + +G +P+
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + K GK++D L +M G PD TY+ L+ LC+ ++ A ++ ++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+G DL T +L+ CR + +A+ ++M + GL P +LT+ + + K G
Sbjct: 464 SKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 182/374 (48%), Gaps = 18/374 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAG----MVEAAIWT 55
+I L K + + A ++ D K+ G P+ VS +T LI Y + G M +A
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCS-PNVVSYNT---LIDGYCKLGGNGKMYKADAVL 284
Query: 56 FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
E N D+ N + F IL+D K + + + F ++ LDQ P V YN L
Sbjct: 285 KEMVEN-DVSPNLTT----FNILIDGFWKDDNLPGSMKVF--KEMLDQDVKPNVISYNSL 337
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+NG + +A +M V PN++TY L+ G+C+ + A+ + ++ +G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P +YN +ID + G+ ++ + E P + TY L+ G C+ G++E A K
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ + S+G LP T++ + + G+ A L ++M + G P LTY+I++K C
Sbjct: 458 LFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 296 KEDKLDLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
KE L A + +M K R +++ + +L+ + K ++A+ +M+ +GLVP+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 355 LTFKRLNDEFKKRG 368
+T++ + +E +G
Sbjct: 577 ITYEIVKEEMVDQG 590
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 9/316 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ +L K+ R A EY +K + + + P V +N+++N ++ + A +M+
Sbjct: 194 LMIALLKENR-SADVEYVYK-EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKV 251
Query: 138 ENVTPNVVTYGTLVEGYCRL---RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+PNVV+Y TL++GYC+L ++ +A ++KEM + + PN +N +IDG +
Sbjct: 252 YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + L + P +++Y SL+ G C G + A + M+S G P+ TYN
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K +++A++++ + G P Y++L+ CK K+D + +EM+ G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T LI LCR + A F+ + +GL P +TF L + + ++G + A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAA 490
Query: 375 KLCNVMSSV---PRSM 387
L MS + PR +
Sbjct: 491 MLLKEMSKMGLKPRHL 506
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 3/235 (1%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+NV N + LV Y R + K G + +A+ ++ L++ R +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
V + + + + P + T+ ++ CK G + A +++ M G P+ +YN
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 258 YFSKF---GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K GK+ A + ++M+E+ +P+ T++IL+ K+D L +++V KEM +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
++ + LI+ LC K EA + + M+ G+ P+ +T+ L + F K M
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD T+ LI R G +EAA F+ + F IL++ C++G
Sbjct: 433 VPDV---GTYNCLIAGLCRNGNIEAAKKLFD-----QLTSKGLPDLVTFHILMEGYCRKG 484
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN-VTPNVV 145
+ A+ + ++ P YNI++ G+ + N+K A +M KE + NV
Sbjct: 485 ESRKAAMLLKEMSKM--GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+Y L++GY + +++ A L+ EM ++G+ PN I Y V + +V+ G ++ G +
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 174/375 (46%), Gaps = 13/375 (3%)
Query: 20 DKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILL 79
D + PD VS F L+ Y R G + A F+ D+V + + L+
Sbjct: 345 DMLKSKFTPDIVS---FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT----YNTLI 397
Query: 80 DSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
LC G + AA K++ DQ P + Y IL+NG F+ V A F+ EM +
Sbjct: 398 HGLCMWGYLDAALRL--KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
+ P+ Y T + G ++ A + +EM G P+ I YN + L + G FEE
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
++E + P VTYTS++ G+ K G L A ++ M+S+G PS TY
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAH 575
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
+ ++ A + KM+E + +TY+ ++ LC ++D A + EM+ +G +
Sbjct: 576 AAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNK 635
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP----HYLTFKRLNDEFKKRGMTALAQK 375
+ T+LI+ C M ++EA + +M+ R + P H + K L+ +++ + +
Sbjct: 636 FSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESL 695
Query: 376 LCNVMSSVPRSMELL 390
+ NV ++ +E+L
Sbjct: 696 IQNVEDNINVRIEML 710
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 22/359 (6%)
Query: 28 PDFV-SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD---SGASLFEILLDSLC 83
PDF S+ F ++ ++ AA W E + +M D +G ++ D +
Sbjct: 113 PDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMI 172
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G + P V+ N +L + A+ + M + + P
Sbjct: 173 RNGLL------------------PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPT 214
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VVTY T+++ YC+ RVD+A+ L+ EM++ G PN + YN +++GL + G E+ G++E
Sbjct: 215 VVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIE 274
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L + TY L+ G+C+ G A +++ M++R P+ +TYN K+
Sbjct: 275 EMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWV 334
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+V + M++S +TPD ++++ LL C+ + A + E+KCR + T
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYN 394
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LIH LC D A ++M +GL P T+ L + K G ++A+ N M S
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 37/343 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA------ 128
+ +LDS CK+GRV A E + +E + P YN+L+NG + ++ A
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQE--RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEE 275
Query: 129 ---------------------------ERFWL--EMRKENVTPNVVTYGTLVEGYCRLRR 159
E F L EM P + TY TL+ G C+ +
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQ 335
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
V +M K P+ + +N+++ G G E + + + PT++TY +
Sbjct: 336 VTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G C G L+ A ++ K M +G P TY K G V A + +M+ G
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PDR Y+ + K +A + +EM G D+ T + +H LC+ F+EA
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
E+M+ GL+P ++T+ + + F K G A+++ N M S
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLS 558
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV YN +L+ + + V A EM++ PN VTY LV G + +++A L
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++EM G+ +A YN +I+G + G F E ++E + PT+ TY +L+ G CK
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ G M+ F P ++N + + G + +A L+ ++ P +T
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LC LD A+++ KEM +G D+ T T+L++ ++ A F +M+
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 347 RRGLVP 352
+GL P
Sbjct: 453 SKGLKP 458
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 178/411 (43%), Gaps = 44/411 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +AK K + + L K+ +P V T I+I + V+ A+ A
Sbjct: 62 LLTSIAKMKHYSTVLSLS-KKMDSFGIPPDVY--TLTIVINSFCHLNRVDFALSVL--AK 116
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + D+ F L+ LC G++ A + F K + + + P V Y L+NG
Sbjct: 117 ILKLGHQPDTAT--FTTLVRGLCVVGKIGEALDVFDKM--VGEGFQPNVVTYGTLMNGLC 172
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + + +A + EM + ++P++ TY +L+ C L L+ EM K I PN +
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N V+D L + G+ E +++ + P +VTY +L+ G+C +++ A K+ MM
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292
Query: 241 ISRG-----------------------------------FLPSPTTYNYFFRYFSKFGKV 265
+ G +P+ TY+ G++
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+DA+ L+ +M+ G P+ +TY ILL LCK +L A+ + K ++ D D+ +
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
I +CR + A F ++ RGL P T + KRG+ A KL
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 37/290 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I++D+LCK+G+V A + + P V Y L++G + +A + +
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMM--IQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDM 291
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + NVV+Y TL+ GYC+++R+D+A+ L +EM ++ + PN + Y+T+I GL GR
Sbjct: 292 MVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR 351
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSL---------------------------------- 220
++ + + C P +VTY+ L
Sbjct: 352 LQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNI 411
Query: 221 -VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+ G C+AGDLE A + + RG P T+N R K G +++A L+R+M E+G
Sbjct: 412 AIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENG 471
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ TY+ + + L + +K AIQ+ +EM RG D+ T+ +L+ +L
Sbjct: 472 CLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 166/387 (42%), Gaps = 43/387 (11%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSL 82
GH+ PD TF L+R G + A+ F+ MV + F + L++ L
Sbjct: 121 GHQ-PDTA---TFTTLVRGLCVVGKIGEALDVFD-----KMVGEGFQPNVVTYGTLMNGL 171
Query: 83 CKQGRVKAASEYF-----------------------------HKRKELDQ----SWAPTV 109
CK ++ A F H L++ P V
Sbjct: 172 CKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNV 231
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
NI+++ + V +A M + V P+VVTY L++G+C +D A+++
Sbjct: 232 VSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDM 291
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M + G N + YNT+I+G + R ++ + E E P +TY++L+ G C G
Sbjct: 292 MVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR 351
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
L+ A + M++ G +P+ TY+ Y K ++ +AM L + + S PD Y+I
Sbjct: 352 LQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNI 411
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ +C+ L+ A + + RG D+ T ++I LC+ DEAS F +M G
Sbjct: 412 AIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENG 471
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ + T+ + + T+ A +L
Sbjct: 472 CLRNGCTYNTITQGLLQNNKTSRAIQL 498
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 154/372 (41%), Gaps = 53/372 (14%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
NF S + F L D+L FH+ L P + + LL + K+
Sbjct: 25 NNFQSKSLHFNTLDDAL----------SSFHRM--LHMHPPPPIFEFAKLLTSIAKMKHY 72
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+M + P+V T ++ +C L RVD A+ ++ ++ K G +P+ + T+
Sbjct: 73 STVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTL 132
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ GL G+ E + ++ + P +VTY +L+ G CK L A + MI++G
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGI 192
Query: 246 LPSPTTYNYFFR-----------------------------------YFSKFGKVEDAMN 270
P TYN K GKV +A +
Sbjct: 193 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHD 252
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ MI+ G PD +TY L+ C ++D A++V M GC ++ + LI+ C
Sbjct: 253 VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYC 312
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRSM 387
++ + D+A FE+M R+ L+P+ +T+ L G A L N M +P +
Sbjct: 313 KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLV 372
Query: 388 E---LLDSRCKD 396
LLD CK+
Sbjct: 373 TYSILLDYLCKN 384
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 156/341 (45%), Gaps = 35/341 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +LL LC + + + A + H E P V Y +++G+F+ V A + E
Sbjct: 87 YTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCE 146
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRA------------------------------- 163
M + P+VVT ++++G C+++ +D+A
Sbjct: 147 MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQ 206
Query: 164 ----IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+R++K+M + G PN + Y+ +ID L + G E ++ + P + TY
Sbjct: 207 LKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGG 266
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GY GDL + ++ +M+ G P +N + K G++++AM + KM + G
Sbjct: 267 LLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQG 326
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD ++Y ++ LCK +LD A+ +M G D+ T LIH K+++A
Sbjct: 327 LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F +M+ RG+ P + F + D+ K G A+ L ++M
Sbjct: 387 ELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLM 427
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 143/354 (40%), Gaps = 47/354 (13%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
++D LCK + A E R+ D+ P YN L++G+ S +K+A R +M +
Sbjct: 162 IIDGLCKVQAMDKAEEVL--RQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSR 219
Query: 138 EN-----VT------------------------------PNVVTYGTLVEGYCRLRRVDR 162
VT PNV TYG L+ GY +
Sbjct: 220 HGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVE 279
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
L+ M + G+ P+ ++N I V+ GR +E + P +++Y +++
Sbjct: 280 MNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMID 339
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G CK G L+ A MI G P + FS +GK E A L+ +M++ G P
Sbjct: 340 GLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRP 399
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ + ++ L KE K+ A + M ++ + +IH K DE
Sbjct: 400 TVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLL 459
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
+DM+ GL P+ +TF L D+ G+ CN L+DS C+D
Sbjct: 460 DDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVAT-CNT---------LIDSCCED 503
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 26/293 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L+ YA G + E N +D MV+N +F I + + K GR+ A
Sbjct: 263 TYGGLLHGYATKGDL------VEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAM 316
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F+K ++ Q P + Y +++G + + A + +M + ++P++V + L+
Sbjct: 317 LTFNKMRQ--QGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIH 374
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G+ + ++A L EM GI P +V+ T+ID L + G+ E + + + P
Sbjct: 375 GFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKP 434
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+V+Y +++ GY AG L+ K+L M+S G P+ T+N L
Sbjct: 435 NVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFN----------------TLL 478
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
M+ G PD T + L+ C++ +++ + + +EM + D T ++
Sbjct: 479 DDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 161/382 (42%), Gaps = 56/382 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A +L H +PD T+ L+ Y +G ++ A+ + +
Sbjct: 162 IIDGLCKVQAMDKAEEVLRQMFDKHIMPDCT---TYNSLVHGYLSSGQLKEAVRILKQMS 218
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE------------LDQSWA-- 106
N + +L+D LCK G A E + + L +A
Sbjct: 219 RHGQPPN----GVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATK 274
Query: 107 -------------------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
P ++NI + + + + +A + +MR++ + P++++Y
Sbjct: 275 GDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISY 334
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
GT+++G C++ R+D A+ +M +G+ P+ +V+ +I G G++E+ + +
Sbjct: 335 GTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMD 394
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
PT+V +T+++ K G + A + +M P+ +YN + GK+++
Sbjct: 395 RGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDE 454
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
+ L M+ G P+ +T++ LL +D L + ++ D+ T LI
Sbjct: 455 VLKLLDDMLSVGLKPNAVTFNTLL-----DDMLSMGLKP-----------DVATCNTLID 498
Query: 328 LLCRMYKFDEASAEFEDMIRRG 349
C + ++ F +M+ +
Sbjct: 499 SCCEDGRIEDVLTLFREMLSKA 520
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 7/246 (2%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
V P VTY L+ C + ++ A + ++ K G+ NAI + ++ L R +
Sbjct: 9 VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68
Query: 200 GMMERF---LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYNY 254
++ R+ L C P + +YT L+KG C E A ++ MM G P+ +Y
Sbjct: 69 NIVIRWTPKLGCT--PDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K +V A L+ +M++ G PD +T + ++ LCK +D A +V ++M +
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T L+H + EA + M R G P+ +T+ L D K G A+
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAR 246
Query: 375 KLCNVM 380
++ N M
Sbjct: 247 EILNSM 252
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 7/268 (2%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
APT Y IL++ + A ++ K + N +++ ++ C +R A+
Sbjct: 10 APTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMN 69
Query: 166 LV-KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG----PTMVTYTSL 220
+V + K G P+ Y ++ GL + + EE ++ ++ E G P +V+YT++
Sbjct: 70 IVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIH--MMAEDGDHCPPNVVSYTTV 127
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G+ K ++ A + M+ RG P T N K ++ A + R+M +
Sbjct: 128 IHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHI 187
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD TY+ L+ +L A+++ K+M G + T +MLI LC+ EA
Sbjct: 188 MPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEARE 247
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
MI+ P+ T+ L + +G
Sbjct: 248 ILNSMIQSRGNPNVATYGGLLHGYATKG 275
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 87/230 (37%), Gaps = 46/230 (20%)
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT VTYT L+ C G L A L +I G + ++ R + DAMN
Sbjct: 10 APTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMN 69
Query: 271 LY-RKMIESGYTPDRLTYHILLKILCKEDKLDLAI------------------------- 304
+ R + G TPD +Y +LLK LC E K + A+
Sbjct: 70 IVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIH 129
Query: 305 ------QVSK------EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+V K EM RG D+ T +I LC++ D+A M + ++P
Sbjct: 130 GFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMP 189
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMS-------SVPRSMELLDSRCK 395
T+ L + G A ++ MS V SM L+D CK
Sbjct: 190 DCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSM-LIDCLCK 238
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 161/311 (51%), Gaps = 41/311 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVLMIDSYGKEGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF++++ ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYDALFKVIM----RRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ +N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E +++ +
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVD 283
Query: 208 CEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT + L+ CKAG+L+ A+ +LK MI Y + K G+ +
Sbjct: 284 KYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYD 343
Query: 267 DAMNLYRKMIE 277
A+ L K+IE
Sbjct: 344 QAVKLLDKLIE 354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M
Sbjct: 85 LMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSX 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P ++TY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M + P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + + K G A KL +
Sbjct: 325 EAGHYGVLIENYCKAGQYDQAVKLLD 350
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GRF + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAP 288
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGAKNSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK + + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S M L+ S+CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCK 303
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGKNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GYGIKPN----AITYSTLLPGLCNAEKMSEARSIL--KEMVDKYIAPTDNSIFMRLISSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ N+ A M + +V YG L+E YC+ + D+A++L+ ++ ++ I
Sbjct: 302 CKAGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +++ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHMEPSA--YNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVGSEKSAYDSLVQSYLKKSEPADAKAALDSMIENDHLPDSSLFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 186/376 (49%), Gaps = 23/376 (6%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
D +V L+R G + AI FEFA + KN L ++ +L + G+V+ A
Sbjct: 41 DDYVFLLRELGNRGDCKKAICCFEFAVKRERKKN--EQGKLASAMISTLGRLGKVEMAKT 98
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + L + + TV ++ +++ + RS +A + + M+ + PN+VTY +++
Sbjct: 99 VF--KAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDA 156
Query: 154 YCRLRRVD--RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE-- 209
C V+ R + + EM + G++P+ I +N+++ + G +E R L CE
Sbjct: 157 -CGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA-----RSLSCEMV 210
Query: 210 ---PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ TY +L+ CK G L+ A +I+ M ++ LP+ TY+ ++K G+++
Sbjct: 211 NRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLD 270
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
DA NL+ +M G + DR++Y+ LL I K + + A+ V +EM+ G D+ T L+
Sbjct: 271 DARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 330
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ------KLCNVM 380
+ YK+D FE+M R + P+ LT+ L D + K G+ A K +
Sbjct: 331 GGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLK 390
Query: 381 SSVPRSMELLDSRCKD 396
+ V L+D+ CK+
Sbjct: 391 ADVVLYSALIDALCKN 406
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 147/338 (43%), Gaps = 9/338 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV--KAAS 92
F +I Y R+G AI F + + N + + ++D+ C +G V K
Sbjct: 114 AFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVT----YNAVIDA-CGKGGVEFKRVL 168
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
E F + L P +N LL + + A EM + ++ TY TL++
Sbjct: 169 EIFDEM--LRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLD 226
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
C+ ++D A ++ EM + I PN + Y+T+IDG +AGR ++ +
Sbjct: 227 AVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISL 286
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
V+Y +L+ Y K G E A + + M + G TYN + K K + ++
Sbjct: 287 DRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVF 346
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M +P+ LTY L+ + K A+ V +E K G D+ + LI LC+
Sbjct: 347 EEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKN 406
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ A + ++M + G+ P+ +T+ + D F + T
Sbjct: 407 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATT 444
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 6/236 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ + G ++ A FE + + KN + ++D K GR+ A
Sbjct: 220 TYNTLLDAVCKGGQLDMA---FEIMSEMP-AKNILPNVVTYSTMIDGYAKAGRLDDARNL 275
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F++ K L S YN LL+ + + ++A EM + +VVTY L+ GY
Sbjct: 276 FNEMKFLGISLDRVS--YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGY 333
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ + D ++ +EM+ + PN + Y+T+ID + G + E + F +
Sbjct: 334 GKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADV 393
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
V Y++L+ CK G +E A +L M G P+ TYN F + E ++
Sbjct: 394 VLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 449
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 160/340 (47%), Gaps = 38/340 (11%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
F G + ++++LCK G +AA + K L + + LL G+ R N++
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI--LKIGFVLDSHIGTSLLLGFCRGLNLR 247
Query: 127 DAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRR-------------------------- 159
DA + + M KE PN V+Y L+ G C + R
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 160 ---------VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+D+A L EM G +PN Y +IDGL G+ EE +G+ + +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P+++TY +L+ GYCK G + A ++L +M R P+ T+N + GK A++
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L ++M+++G +PD ++Y++L+ LC+E ++ A ++ M C + D T T +I+ C
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ K D ASA M+R+G+ +T L D K G T
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 177/396 (44%), Gaps = 45/396 (11%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKA 90
S T+ +LI+ G+++ A F+ +M+ + + +L+D LC+ G+++
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFD-----EMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A+ RK + P+V YN L+NG+ + V A M K PNV T+ L
Sbjct: 355 ANGVC--RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+EG CR+ + +A+ L+K M G+ P+ + YN +IDGL G ++ +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG-------------------------- 244
P +T+T+++ +CK G + AS L +M+ +G
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 245 ---------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
L +P + N SK KV++ + + K+ + G P +TY L+ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ + + ++ + MK GC ++ T++I+ LC+ + +EA M G+ P+++
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
T+ + + G L + L V + V R EL D
Sbjct: 653 TYTVMVKGYVNNG--KLDRALETVRAMVERGYELND 686
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 162/401 (40%), Gaps = 61/401 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS + +LI R G + A N D+ + F ++++ CKQG+
Sbjct: 439 PDIVS---YNVLIDGLCREGHMNTAYKLLSSMNCFDI----EPDCLTFTAIINAFCKQGK 491
Query: 88 VKAASEYF----HKRKELDQSWAPTV-----------------------------RVYNI 114
AS + K LD+ T+ N+
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+L+ + VK+ ++ K + P+VVTY TLV+G R + + R+++ M+ G
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
PN Y +I+GL + GR EE ++ P VTYT +VKGY G L+ A
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 235 KILKMMISRGFLPSPTTYNYFFRYF---------SKFGKVED---------AMNLYRKMI 276
+ ++ M+ RG+ + Y+ + F S+ V D +N ++
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVV 731
Query: 277 ES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
E G L ++ + LCKE + D + + + + RG ++ +++ C K
Sbjct: 732 EQLGGCISGLCIFLVTR-LCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKH 789
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ +++ G VP + +F + KK G A++L
Sbjct: 790 TKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFL--------------------------- 246
M+ Y ++V CK G E A + ++ GF+
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 247 ---------PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
P+ +Y+ + G++E+A L +M E G P TY +L+K LC
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+D A + EM RGC ++ T T+LI LCR K +EA+ M++ + P +T+
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
L + + K G A +L VM
Sbjct: 375 NALINGYCKDGRVVPAFELLTVM 397
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 29/258 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D L + G + + K P V Y I++NG + V++AE+
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKL--SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ V+PN VTY +V+GY ++DRA+ V+ M + G E N +Y++++ G V + +
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Query: 195 ----------------------FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
E+ ++E+ C G + T L CK G +
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRL----CKEGRTDE 757
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
++ +++ ++ RG Y SK K M L +++SG+ P ++ ++++
Sbjct: 758 SNDLVQNVLERGVFLEKAMDIIMESYCSK-KKHTKCMELITLVLKSGFVPSFKSFCLVIQ 816
Query: 293 ILCKEDKLDLAIQVSKEM 310
L KE + A ++ E+
Sbjct: 817 GLKKEGDAERARELVMEL 834
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 154/319 (48%), Gaps = 10/319 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T LI RAG ++ A + +MV K D + +L+D CK+G + E
Sbjct: 394 THTALINGLCRAGELKEADRVLQ-----EMVDKGLDVDVVTYTVLIDGYCKRGNM---VE 445
Query: 94 YFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F E+ + AP V Y L +G + +V+ A EM + + NV TY +L+
Sbjct: 446 AFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLIN 505
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C+ +++A+R++ EM G + Y T+ID L ++G F+ M++ L P
Sbjct: 506 GLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKP 565
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++ TY L+ G+C +G +EG K+L+ M+ + P+ TYN + + ++ +Y
Sbjct: 566 SIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIY 625
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+ M P+ TY+IL+K CK + A+ +EM +G + + + LI LL +
Sbjct: 626 KGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKK 685
Query: 333 YKFDEASAEFEDMIRRGLV 351
KF EA F+ M GL
Sbjct: 686 KKFSEARVFFDKMRNEGLT 704
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 14/365 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFA 59
++K L A A C D++ PD V T+ ++ Y G +E A+ E A
Sbjct: 261 LLKALLSAGRLKDA-CQHFDEMSS--PPDVV---TYGTMVHGYCVRGELENAVKLLDEMA 314
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
K +S A+++ ++ LC +G+V A A V+ +++G+
Sbjct: 315 -----AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTM--HGVALDAVVFTTVISGF 367
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ A R + EM+K + + VT+ L+ G CR + A R+++EM +G++ +
Sbjct: 368 CSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDV 427
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y +IDG + G E + + P +VTYT+L G CK GD+ A+++L
Sbjct: 428 VTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHE 487
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M ++G + TYN KFG +E AM + +M +G+ D TY L+ LCK +
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A + +EM +G + T +L++ C + + E M+ + + P+ +T+
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNS 607
Query: 360 LNDEF 364
L ++
Sbjct: 608 LMKQY 612
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 8/287 (2%)
Query: 35 TFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ +LI Y + G MVEA F N + + + + L D LCKQG V+AA+E
Sbjct: 429 TYTVLIDGYCKRGNMVEA----FRVHNEM-VGRRVAPNVVTYTALSDGLCKQGDVRAANE 483
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
H+ ++ V YN L+NG + N++ A R EM +V TY TL++
Sbjct: 484 LLHEM--CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDT 541
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ DRA +++EM +GI+P+ YN +++G +GR E ++E L P
Sbjct: 542 LCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY SL+K YC +++ ++I K M S+ P+ TYN + K +++A+ ++
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQ 661
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+MIE G +Y L+++L K+ K A +M+ G + D
Sbjct: 662 EMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPD 708
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 40/343 (11%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF-------- 120
D ILL +L GR+K A ++F + S P V Y +++G+
Sbjct: 252 DKNVCSHNILLKALLSAGRLKDACQHFD-----EMSSPPDVVTYGTMVHGYCVRGELENA 306
Query: 121 ---------------------------RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
V DA R +M V + V + T++ G
Sbjct: 307 VKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISG 366
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C + A RL +EM+K G+ + + + +I+GL AG +E +++ +
Sbjct: 367 FCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVD 426
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTYT L+ GYCK G++ A ++ M+ R P+ TY K G V A L
Sbjct: 427 VVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLH 486
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M G + TY+ L+ LCK L+ A+++ EM+ G D+ T T LI LC+
Sbjct: 487 EMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG 546
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+FD A ++M+ +G+ P T+ L + F G +KL
Sbjct: 547 EFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL 589
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 9/290 (3%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+NILL + +KDA + + EM P+VVTYGT+V GYC ++ A++L+ EM
Sbjct: 258 HNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMA 314
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+G+E NA VY +VI L G+ + ++E + V +T+++ G+C GDL
Sbjct: 315 AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A ++ + M RG T+ + G++++A + ++M++ G D +TY +L+
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLI 434
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
CK + A +V EM R ++ T T L LC+ A+ +M +GL
Sbjct: 435 DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLE 494
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ T+ L + K G A ++ M + + L+D+ CK
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCK 544
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 201/426 (47%), Gaps = 58/426 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKA 339
Query: 263 GKVEDAMNLYRKMIE--------SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+ + A+ L K+IE S + Y+ +++ LC + A + +++ G
Sbjct: 340 GQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLG 399
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D LI + D A + M+RR + + L + K+ A A+
Sbjct: 400 VQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAK 458
Query: 375 KLCNVM 380
+ M
Sbjct: 459 AALDSM 464
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S + L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCK 303
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFLRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 176/368 (47%), Gaps = 12/368 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ VLA+A A L + VP + TF + R R G + A+
Sbjct: 145 VLSVLARADCHADALALYRRMVHRDRVPP--TTFTFGVAARALCRLGRADEALALLRGMA 202
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
V + A L++ ++ +LC QG V A+ ++ L A V ++ ++ G
Sbjct: 203 RHGCVPD----AVLYQTVIHALCDQGGVTEAATLLNEM--LLMGCAADVNTFDDVVRGMC 256
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V++A R M + P V+TYG L++G CR+R+ D A + M E N +
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVV 312
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++NTVI G + G+ E + + E + P TY+ L+ G CK G + A ++L+ M
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+GF P+ TY F K G +D L +M G T + Y+ ++ LCK+ ++
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A+ + +EM+ +GC+ D+ + +I+ LC + +EA FE+++ G+V + +T+ +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 361 NDEFKKRG 368
+ G
Sbjct: 493 IHALLRDG 500
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 2/296 (0%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+K A + IL+ LCK GR+ +A R+ + +AP V Y I+L+ + ++
Sbjct: 339 LKGCQPDAHTYSILMHGLCKLGRIGSAVRLL--REMEKKGFAPNVVTYTIVLHSFCKNGM 396
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
D EM + +T N Y ++ C+ R+D A+ L++EMR +G P+ YNT
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I L + EE M E L +TY +++ + G + A ++ K MI G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+YN + K G V+ ++ L +M E G P+ ++Y+IL+ LCKE ++ A+
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++SK+M +G D+ T LI+ LC+M A E + + P +T+ L
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 632
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 10/305 (3%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M K G + LL LC+ + A + EL+ V ++N ++ G
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN------VVLFNTVIGGCLAEG 325
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +A + M + P+ TY L+ G C+L R+ A+RL++EM K+G PN + Y
Sbjct: 326 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYT 385
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT--YTSLVKGYCKAGDLEGASKILKMMI 241
V+ + G +++ ++E + G T+ + Y ++ CK G ++ A +++ M
Sbjct: 386 IVLHSFCKNGMWDDTRALLEE--MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S+G P +YN + ++E+A +++ ++E G + +TY+ ++ L ++ +
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A++++KEM GC +D+ + LI +C+ D + E+M +G+ P+ +++ L
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563
Query: 362 DEFKK 366
E K
Sbjct: 564 SELCK 568
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 149/303 (49%), Gaps = 2/303 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF ++ +G++ A+E + + P Y+IL++G + + A R
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGL--KGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 370
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K+ PNVVTY ++ +C+ D L++EM +G+ N+ YN +I L + G
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E G+++ P + +Y +++ C +E A + + ++ G + + TYN
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ G+ +DA+ L ++MI G + D ++Y+ L+K +CK+ +D ++ + +EM +
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + + +LI LC+ + +A + M+ +GL P +T+ L + K G A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610
Query: 374 QKL 376
L
Sbjct: 611 LNL 613
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 6/267 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I++ + + GM + E + + N + ++ +LCK GR+ A
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG----YNGMIYALCKDGRMDEAMGL 438
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + Q P + YN ++ ++ +++AE + + +E V N +TY T++
Sbjct: 439 IQEMRS--QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R R A+RL KEM G + + YN +I + + G + ++E P
Sbjct: 497 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 556
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y L+ CK + A ++ K M+++G P TYN K G + A+NL K
Sbjct: 557 VSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK 616
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLD 301
+ PD +TY+IL+ CK LD
Sbjct: 617 LHNENVHPDIITYNILISWHCKVRLLD 643
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 110/289 (38%), Gaps = 68/289 (23%)
Query: 162 RAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEA---------------------------- 192
RA+ L+ ++ R+ G++P+ YN V+ L A
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 193 --------GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
GR +E ++ P V Y +++ C G + A+ +L M+ G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK-------- 296
T++ R G+V +A L +M+ G P +TY LL+ LC+
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 297 -----------------------EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
E KL A ++ + M +GC D T ++L+H LC++
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ A +M ++G P+ +T+ + F K GM + L MS+
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 155/318 (48%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ + A + FE + KN + ++++ C+ G V+ ASE
Sbjct: 215 TYTILVDGLSAARDITKVEAVFEEMKS----KNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + P Y L+NG+ + ++ AE +M+ V N + + T+++GY
Sbjct: 271 FDEC--VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR VD+A+ + M K GIE + YNT+ GL A R +E ++ + P
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+YT+L+ +C GD+ A ++ + M G PS TYN + K G + +A +
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNE 448
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G PD +Y L+ C K+D+A+++ +EMK RG +L T LI L + +
Sbjct: 449 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGR 508
Query: 335 FDEASAEFEDMIRRGLVP 352
+EA +++M+ GL P
Sbjct: 509 SEEAFQLYDNMLGDGLTP 526
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 152/309 (49%), Gaps = 8/309 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+D L + F + K ++ + V Y+ ++N + R+ NV+ A + E
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKS--KNLSGDVYFYSSVINAYCRAGNVRRASEVFDE 273
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ PN TYG L+ G+C++ +++ A LV +M+ G+ N IV+NT+IDG
Sbjct: 274 CVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNM 333
Query: 195 FE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ E+ +ME+ + + TY +L G +A ++ A +L++MI +G P+ +
Sbjct: 334 VDKALEIKMIMEKMGI---ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y G + +A L+R+M +G P +TY++++ K+ + A + EM+
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 450
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ + L+H C K D A FE+M +RG P+ + + L K G +
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 372 LAQKLCNVM 380
A +L + M
Sbjct: 511 EAFQLYDNM 519
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 169/377 (44%), Gaps = 24/377 (6%)
Query: 8 AKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
A D+A LL K PD V+ + +++ Y ++G V A + + N
Sbjct: 120 AGHLDTAADLL--KQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVN 177
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
A + LLD+ ++ +E + ++ PTV Y IL++G ++++
Sbjct: 178 ----ALCYNSLLDAYTREKDDDRVAEMLKVME--NEGIEPTVGTYTILVDGLSAARDITK 231
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
E + EM+ +N++ +V Y +++ YCR V RA + E GIEPN Y +I+
Sbjct: 232 VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALIN 291
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G + G+ E ++ V G + + +++ GYC+ ++ A +I +M G
Sbjct: 292 GFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIEL 351
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TYN + ++++A NL R MIE G P+ ++Y L+ I C E + A ++
Sbjct: 352 DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLF 411
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK--------- 358
+EM G + L T +++ + EA +M ++GLVP ++
Sbjct: 412 REMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVN 471
Query: 359 -------RLNDEFKKRG 368
RL +E K+RG
Sbjct: 472 GKVDVALRLFEEMKQRG 488
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 16/276 (5%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFEILLDSLCKQGRVKA 90
++ T+ LI + + G +EAA DM V+ +F ++D C++ V
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVT-----DMQVRGVGINQIVFNTMIDGYCRKNMVDK 336
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E +++ V YN L G R+ + +A+ M ++ V PN V+Y TL
Sbjct: 337 ALEIKMIMEKMGIEL--DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 394
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFL 206
+ +C + A RL +EM G EP+ + YN ++DG ++ G E + M ++ L
Sbjct: 395 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGL 454
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V P + +Y +LV G+C G ++ A ++ + M RG P+ Y +K G+ E
Sbjct: 455 V----PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+A LY M+ G TPD Y L+ L + K ++
Sbjct: 511 EAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNV 546
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
++VTP ++ +V+GYC+ RV A +L+ EM + G++ NA+ YN+++D
Sbjct: 139 DSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDA--------- 187
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
Y + D + +++LK+M + G P+ TY
Sbjct: 188 --------------------------YTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
S + ++ +M + D Y ++ C+ + A +V E G +
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T LI+ C++ + + A DM RG+ + + F + D + ++ M A ++
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 378 NVM 380
+M
Sbjct: 342 MIM 344
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 162/339 (47%), Gaps = 6/339 (1%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
ILI + + G++ A F A L M ++ F L+ LC +G++ A + K
Sbjct: 127 ILINCFCQLGLIPFAFSVF--AKILKM--GYNPNTITFTTLIKGLCLKGQIHQALNFHDK 182
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
L + Y L++G + + A + + V PNVV Y T+++G C+
Sbjct: 183 LVALGFQFNQIS--YGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKD 240
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+ V+ A L EM +GI PN + Y+ +I G G+ ++ + + + P + T+
Sbjct: 241 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTF 300
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
LV +CK+G + A K++ M RG P+ TY+ K +V+ A+ L K+ +
Sbjct: 301 NILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKD 360
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G P+ TY IL+ LC KL+ A + +++ +G DI + T ++ + C+ FDE
Sbjct: 361 QGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDE 420
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
ASA M G +P T++ + K+G +A+KL
Sbjct: 421 ASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKL 459
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
IL++ C+ G + A F K L + P + L+ G + A F ++
Sbjct: 126 NILINCFCQLGLIPFAFSVF--AKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKL 183
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
N ++YGTL++G C++ A+ L++ + + ++PN ++Y+T+IDG+ +
Sbjct: 184 VALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHV 243
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + + P +VTY++L+ G+ G L+ A + MIS P T+N
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNIL 303
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
F K GK+ A+ L +M + G P+ +TY +L LCK ++D A+ + ++K +G
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGI 363
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
++ T T+LI LC K ++A FED++ +G +T+ + F K+G+ A
Sbjct: 364 RPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASA 423
Query: 376 LCNVM 380
L + M
Sbjct: 424 LLSKM 428
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 134/253 (52%), Gaps = 7/253 (2%)
Query: 62 LDMVKNFDS-----GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
LD+++ D ++ ++D +CK V A + + + + + +P V Y+ L+
Sbjct: 212 LDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM--VSKGISPNVVTYSALI 269
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+F +KDA + +M EN+ P+V T+ LV+ +C+ ++ A++LV EM G
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP 329
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PN + Y++++D L + R ++ ++ + P M TYT L+ G C +G LE A I
Sbjct: 330 PNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI 389
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ ++ +G+ + TY F F K G ++A L KM E+G PD TY ++ L K
Sbjct: 390 FEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFK 449
Query: 297 EDKLDLAIQVSKE 309
+ + D+A ++ +E
Sbjct: 450 KGENDMAEKLHRE 462
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 46/325 (14%)
Query: 90 AASEYFHKRKELD-----------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+ S FH ++D Q+ P +N +L +SK+ +M
Sbjct: 57 STSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFR 116
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
+ PN+V L+ +C+L + A + ++ K G PN I + T+I GL G+ +
Sbjct: 117 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA 176
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM------------------- 239
++ + ++Y +L+ G CK G+ A +L+
Sbjct: 177 LNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDG 236
Query: 240 ----------------MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
M+S+G P+ TY+ F GK++DA++L+ KMI PD
Sbjct: 237 MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPD 296
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
T++IL+ + CK K+ A+++ EM RG ++ T + ++ LC+ ++ D+A A
Sbjct: 297 VYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLT 356
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRG 368
+ +G+ P+ T+ L D G
Sbjct: 357 KLKDQGIRPNMHTYTILIDGLCTSG 381
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 120 FRSKN-VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
F S N V DA + + ++N TP + + ++ + + + L K+M GI+PN
Sbjct: 62 FHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPN 121
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ N +I+ + G + + L P +T+T+L+KG C G + A
Sbjct: 122 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHD 181
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+++ GF + +Y K G+ A++L R++ P+ + Y ++ +CK+
Sbjct: 182 KLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDK 241
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++ A + EM +G ++ T + LI + K +A F MI + P TF
Sbjct: 242 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFN 301
Query: 359 RLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDSRCK 395
L D F K G + A KL + M ++ +LD+ CK
Sbjct: 302 ILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 39/206 (18%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N++ Y + + VD A+ L + ++ P AI +N ++ LV++ + V
Sbjct: 51 NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTV---- 106
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
Y S K M RG P+ N F +
Sbjct: 107 -------------LYLS------------------KKMEFRGIKPNLVNCNILINCFCQL 135
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G + A +++ K+++ GY P+ +T+ L+K LC + ++ A+ ++ G + +
Sbjct: 136 GLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISY 195
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRR 348
LI LC++ E A D++RR
Sbjct: 196 GTLIDGLCKV---GETRAAL-DLLRR 217
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 9/334 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS +T + +++ + EA E + K A I++ CK+G
Sbjct: 345 LPDVVSYNTLINGCLEWSK--ISEAFKLLEEMSE-----KGVKPNAVTHNIMVKWYCKEG 397
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ AS K +E ++P YN L+NG+ ++ N+ +A R EM ++N+ + VT
Sbjct: 398 KMDDASNTITKMEE--SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
T++ CR ++++ A +L+ RK G + + Y T+I G + G + + +
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK 515
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E P+ VTY ++ G C+ G E A L ++ G LP TTYN + + G VE
Sbjct: 516 EKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVE 575
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + KM+E+ + PD T +ILL+ LC E L+ A+++ +G ID T LI
Sbjct: 576 KAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLI 635
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LC+ + D+A +M + L P + T+ +
Sbjct: 636 TSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 6/353 (1%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ ++ +T + + RY + V + F A L +V N ++ F I++ C + +
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNT----FNIVIYGYCLENK 223
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
K A E+ + + + S P YN +L+ + + DA ++M+ + PN TY
Sbjct: 224 FKDAVEFLNVMGKYNCS--PDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTY 281
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
LV GYC++ + A +++ M + + P+ YN +I+GL GR EE + +
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+ P +V+Y +L+ G + + A K+L+ M +G P+ T+N +++ K GK++D
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A N KM ESG++PD +TY+ L+ CK + A + EM + +D T ++
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LCR K +EA +RG +++ L + K G A KL + M
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 182/405 (44%), Gaps = 21/405 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K A LL+D +P+ ++T+ IL+ Y + G W E AN
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPN---RNTYNILVYGYCKMG------WLKEAAN 299
Query: 61 NLDMV--KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLN 117
++++ N + +L++ LC +GR++ A F R E++ P V YN L+N
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA---FKLRDEMENLKLLPDVVSYNTLIN 356
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G + +A + EM ++ V PN VT+ +V+ YC+ ++D A + +M + G P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+I+G +AG E M+ VT ++++ C+ LE A K+L
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
RG+ +Y + K G V+ A+ L+ +M E P +TY+ ++ LC+
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K + AI E+ G D T ++H CR ++A M+ P T
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCKD 396
L GM A KL N S ++++ L+ S CK+
Sbjct: 597 NILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 144/365 (39%), Gaps = 67/365 (18%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI Y +AG + A T + KN + +L +LC++ +
Sbjct: 416 PDCVTYNT---LINGYCKAGNMGEAFRTMDEMGR----KNMKMDSVTLNTILRTLCREKK 468
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + ++ + + Y L+ G+F+ NV A + W EM+++ + P+ VTY
Sbjct: 469 LEEAYKLLSSARK--RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 148 G-----------------------------------TLVEGYCRLRRVDRAIRLVKEMRK 172
T++ GYCR V++A + +M +
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+P+ N ++ GL G E+ + ++ VTY +L+ CK G L+
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR-------- 284
A +L M + P TYN + G++ +A KM+E G P +
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNE 706
Query: 285 ---------------LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ Y +K LC E K A+++ E K +G +D T L+ L
Sbjct: 707 TVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766
Query: 330 CRMYK 334
+ K
Sbjct: 767 IKRRK 771
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
+P+ T + Y + + A ++ K+M++ + PN + NT+++ LV VS
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190
Query: 200 GMMERF---LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E F + P + T+ ++ GYC + A + L +M P TYN
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G++ DA +L M G P+R TY+IL+ CK L A V + M
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ T MLI+ LC + +EA ++M L+P +++ L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 161/309 (52%), Gaps = 14/309 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDLWVLMIDSYGKAGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A YF+K L + PT +N+++ G+F
Sbjct: 108 ELGVXRTIKSYDALFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNVMIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ + RF+ +M +TP+VVTY T++ GY R+ +++ + EM+ IEP +
Sbjct: 162 LSGKVETSNRFFXDMXSREITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G R ++ + E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYXSVDRVDBALXLXEEMKXFGIKPNAITYSTLLPGLCDAEKMSEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 282 VXK--YXAPTDNSIFMRLISGQCKVGDLDAAADVJKAMIRLSIPTEAGHYGVLIEXYCKA 339
Query: 298 DKLDLAIQV 306
+ D A+++
Sbjct: 340 GQYDKAVKL 348
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + ++ V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E P +VTY +++ GY + +E
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSREITPDVVTYNTMINGYYRVBKMEEX 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+BA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBALXLXEEMKXFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C++ D A+ + MIR +
Sbjct: 265 LCDAEKMSEARSILKEMVXKYXAPTDNSIFMRLISGQCKVGDLDAAADVJKAMIRLSIPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + + K G A KL +
Sbjct: 325 EAGHYGVLIEXYCKAGQYDKAVKLLD 350
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 7/252 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +KN + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVLHG----AKNSEHALQFFRWVE-RSNLFXHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE + + M TPD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSREITPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + BK++ + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBALXLXEEMKXF 249
Query: 349 GLVPHYLTFKRL 360
G+ P+ +T+ L
Sbjct: 250 GIKPNAITYSTL 261
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 105/232 (45%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ ++ G+ +G +E +++ M
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+ + +M P +TY L+K D++
Sbjct: 177 XSREITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+ + +EMK G + T + L+ LC K EA + ++M+ + P
Sbjct: 237 DBALXLXEEMKXFGIKPNAITYSTLLPGLCDAEKMSEARSILKEMVXKYXAP 288
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 116/261 (44%), Gaps = 22/261 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ Y V+ A+ E + N A + LL LC ++ A
Sbjct: 222 TYTTLIKGYXSVDRVDBALXLXEEMKXFGIKPN----AITYSTLLPGLCDAEKMSEARSI 277
Query: 95 FHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ + + APT ++ L++G + ++ A M + ++ YG L+E
Sbjct: 278 L--KEMVXKYXAPTDNSIFMRLISGQCKVGDLDAAADVJKAMIRLSIPTEAGHYGVLIEX 335
Query: 154 YCRLRRVDRAIRLVKEMRKEGI----------EPNAIVYNTVIDGLVEAGRFEEVSGMME 203
YC+ + D+A++L+ ++ ++ I EP+A YN +I+ L G+ + ++
Sbjct: 336 YCKAGQYDKAVKLLDKVIEKDIISRPQNTLXMEPSA--YNXLIEYLCNNGQTAKAETLVR 393
Query: 204 RFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ + PT + +L++G+ G + A ++LK+M+ R Y+ + + K
Sbjct: 394 ZLMKLGVQDPTALN--TLIRGHSXEGSPDSAFELLKIMLRRKVDSEQXAYDXLXQSYLKK 451
Query: 263 GKVEDAMNLYRKMIESGYTPD 283
+ A MIE+G+ PD
Sbjct: 452 XEPAXAKAALDSMIENGHLPD 472
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 9/302 (2%)
Query: 75 FEILLDSLCKQGRVKAAS---EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
+ L++ CK+G ++ A E RK +P R YN L+ G+ +S NV A
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRK-----LSPNTRTYNELIKGYCKS-NVHKAMGV 449
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+M + V P+VVTY +L++G CR D A RL+ M G+ P+ Y ++ID L +
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ R EE + + P +V YT+L+ GYCKAG ++ A +L+ M+S+ LP+ T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N GK+++A L KM++ G P T IL+ L K+ D A ++M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
G D T T I CR + +A M G+ P T+ L + G T
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 372 LA 373
A
Sbjct: 690 FA 691
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 169/361 (46%), Gaps = 40/361 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHK----------------------RKELDQSWAPTVRV- 111
+ +++ CK G V+ A++Y K RK+LD ++ +
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 112 ----------YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
Y L++G ++ + +A +++M+ + P V TY L++ C R
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A+ LVKEM + GI+PN Y +ID L +FE+ ++ + L P ++TY +L+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
GYCK G +E A ++++M SR P+ TYN + + K V AM + KM+E
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +TY+ L+ C+ D A ++ M RG D T T +I LC+ + +EA
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCK 395
F+ + ++G+ P+ + + L D + K G A + M S +P S+ L+ C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 396 D 396
D
Sbjct: 580 D 580
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 53/408 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L +F+ A LL + +P+ + T+ LI Y + GM+E A+ E
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVI---TYNALINGYCKRGMIEDAVDVVELME 420
Query: 61 NLDMVKNFDSGASL------------------------------FEILLDSLCKQGRVKA 90
+ + N + L + L+D C+ G +
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A D+ P Y +++ +SK V++A + + ++ V PNVV Y L
Sbjct: 481 AYRLLSLMN--DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++GYC+ +VD A ++++M + PN++ +N +I GL G+ +E + + E+ +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT+ T T L+ K GD + A + M+S G P TY F + + + G++ DA +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI-HLL 329
+ KM E+G +PD TY L+K + + A V K M+ GC+ T LI HLL
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 330 -----------------CRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M +FD E M+ + P+ ++++L
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 9/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL+SL + G V + + + L+ P + YN ++NG+ + NV++A ++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEM--LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + P+ TY +L+ GYC+ + +D A ++ EM +G N + Y +I GL A R
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + E PT+ TYT L+K C + A ++K M G P+ TY
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K E A L +M+E G P+ +TY+ L+ CK ++ A+ V + M+ R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T LI C+ +A M+ R ++P +T+ L D + G A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 375 KLCNVMSS---VPRS---MELLDSRCK 395
+L ++M+ VP ++DS CK
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 178/403 (44%), Gaps = 36/403 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
MI L K+K + A C L D + V P+ V + LI Y +AG V+ A E
Sbjct: 503 MIDSLCKSKRVEEA-CDLFDSLEQKGVNPNVV---MYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ KN + F L+ LC G++K A+ + K + PTV IL++
Sbjct: 559 ----LSKNCLPNSLTFNALIHGLCADGKLKEAT--LLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + A + +M P+ TY T ++ YCR R+ A ++ +MR+ G+ P+
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC--KAGDLEGAS--- 234
Y+++I G + G+ +++R P+ T+ SL+K K G +G+
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 235 -------------KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GY 280
++L+ M+ P+ +Y + G + A ++ M + G
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE--- 337
+P L ++ LL CK K + A +V +M C G L++ +LI C +YK E
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI---CGLYKKGEKER 849
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++ F+++++ G L +K + D K+G+ +L NVM
Sbjct: 850 GTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEA 192
+M + +VTPN +Y L+ G C + + A ++ M R EGI P+ +V+N ++ +
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ E + +++ + P + + L+ G K G+ E + + + ++ G+ +
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K G VE L+ M ++G TY +L++
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 141/270 (52%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N+L+N + +S A F ++ K P++ T+ +L+ G+C R++ A+ +V +M +
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE 169
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GI+P+ ++Y T+ID L + G + + + P +V YTSLV G C +G
Sbjct: 170 MGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD 229
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A +L+ M+ R P T+N F K GK+ DA LY +MI+ P+ TY L+
Sbjct: 230 ADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC E +LD A Q+ M+ +GC D+ T LI+ C+ K ++A F +M ++GL
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ +T+ L F G +AQ++ M S
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVS 379
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 20/367 (5%)
Query: 1 MIKVLAKAKEFDSA--WCLLLDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTF 56
++ V+AK K+FD C L +G VS D + +L+ + ++
Sbjct: 77 LLNVIAKMKKFDVVINLCKHLQIMG-------VSNDLYTCNLLMNCFCQS---SQPCLAS 126
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
F L M F+ F L++ C R++ A ++ E+ P V +Y ++
Sbjct: 127 SFLGKL-MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM--GIKPDVVIYTTII 183
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ ++ +V +A + +M + P+VV Y +LV G C R A L++ M K I+
Sbjct: 184 DSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIK 243
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ I +N +ID V+ G+ + + + P + TYTSL+ G C G L+ A ++
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+M ++G P Y F K KVEDAM ++ +M + G T + +TY L++
Sbjct: 304 FYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGL 363
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR---GLVPH 353
K ++A +V M RG ++ T +L+H LC K ++A FEDM +R G+ P+
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPN 423
Query: 354 YLTFKRL 360
T+ L
Sbjct: 424 IRTYNVL 430
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 16/354 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V + +I + G V+ A+ F N + + ++ L++ LC GR
Sbjct: 174 PDVV---IYTTIIDSLCKNGHVDNALSLFNQMENYGIRPD----VVMYTSLVNGLCNSGR 226
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A R + + P V +N L++ + + + DA+ + EM + ++ PN+ TY
Sbjct: 227 WRDADLLL--RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTY 284
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ G C R+D A ++ M +G P+ + Y ++I+G + + E+ M + +
Sbjct: 285 TSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVED--AMKIFYEM 342
Query: 208 CEPGPT--MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ G T +TYT+L++G+ G A ++ M+SRG P+ TYN GKV
Sbjct: 343 SQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKV 402
Query: 266 EDAMNLYRKMIE---SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
A+ ++ M + G P+ TY++LL LC KL+ A+ V +M+ R DI + T
Sbjct: 403 NKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITY 462
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T++I +C+ K +A F + +G+ P+ +T+ + + G+ A L
Sbjct: 463 TIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVL 516
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 14/288 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + TF LI + + G + A + + + N + SL ++ LC +GR
Sbjct: 244 PDVI---TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL----INGLCMEGR 296
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + F+ + + P V Y L+NG+ + K V+DA + + EM ++ +T N +TY
Sbjct: 297 LDEARQMFYLMET--KGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITY 354
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMME 203
TL++G+ + + + A + M G+ PN YN ++ L G+ + M +
Sbjct: 355 TTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQK 414
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R + P P + TY L+ G C G LE A + M R TY + K G
Sbjct: 415 REIDGVP-PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAG 473
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
KV+DA+NL+ + G P+ +TY ++ L +E + A + ++MK
Sbjct: 474 KVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
W Y +L S +A + M + P+++ + L+ ++++ D I
Sbjct: 32 WVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVI 91
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L K ++ G+ + N +++ ++ + S + + + P + T+TSL+ G+
Sbjct: 92 NLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGF 151
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
C +E A ++ M+ G P Y K G V++A++L+ +M G PD
Sbjct: 152 CLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDV 211
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+ Y L+ LC + A + + M R D+ T LI + K +A + +
Sbjct: 212 VMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNE 271
Query: 345 MIRRGLVPHYLTFKRL 360
MI+ + P+ T+ L
Sbjct: 272 MIQMSIAPNIFTYTSL 287
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 10/240 (4%)
Query: 151 VEGYCRLRRVDR----------AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
V +C R + R A+ L M + P+ I + +++ + + +F+ V
Sbjct: 33 VRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN 92
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ + + + T L+ +C++ AS L ++ GF P T+ F
Sbjct: 93 LCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFC 152
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
++E+AM++ +M+E G PD + Y ++ LCK +D A+ + +M+ G D+
Sbjct: 153 LGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVV 212
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T L++ LC ++ +A M++R + P +TF L D F K G A++L N M
Sbjct: 213 MYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEM 272
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 42/179 (23%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ + G A F + + N + + +LL LC G+V A
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRT----YNVLLHCLCYNGKVNKALMI 408
Query: 95 FH--KRKELDQSWAPTVRVYNILLNGWF-------------------------------- 120
F +++E+D P +R YN+LL+G
Sbjct: 409 FEDMQKREID-GVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQ 467
Query: 121 ---RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
++ VKDA + + + V PNVVTY T++ G R + A L ++M+++G+
Sbjct: 468 GMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 43/331 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ L+D LCK GR + + + + AP YN L++G+ ++ ++ + +
Sbjct: 385 IYNTLIDGLCKVGRQQEGLGLMERMRS-QKGCAPDTITYNCLIDGFCKAGEIEKGKELFD 443
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRV--------------------------------- 160
EM KE V PNVVT TLV G CR RV
Sbjct: 444 EMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVN 503
Query: 161 --DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
++A+ L EM K G P+AIVY T+I G +AGR + S ++ P V Y
Sbjct: 504 NFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYN 563
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ G+C+ ++LK M G P TYN Y SK G ++ A + RKMI++
Sbjct: 564 TLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKA 623
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS--TMLIHLLCRMYKFD 336
G P TY ++ C + A+++ K+MK + +T +LI+ LC+ K
Sbjct: 624 GVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKA-ASKVPPNTVIYNILINSLCKNNKVK 682
Query: 337 EASAEFEDMIRRGLVPHYLT----FKRLNDE 363
A + EDM G+ P+ T FK L DE
Sbjct: 683 SAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 167/364 (45%), Gaps = 15/364 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD + T+ LI + +AG +E F+ N + N + L+ +C+ G
Sbjct: 416 APDTI---TYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVT----VNTLVGGMCRTG 468
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
RV +A +F + + + Y L+N + N + A + EM K +P+ +
Sbjct: 469 RVSSAVNFFVEAQR--RGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIV 526
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G+ + R+ A ++ E++K GI P+ + YNT+I G +F V M++
Sbjct: 527 YYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME 586
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +TY +L+ K GDL+ A K+++ MI G +P+ TY + G
Sbjct: 587 EAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGN 646
Query: 267 DAMNLYRKM-IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+AM +++ M S P+ + Y+IL+ LCK +K+ A+ + ++MK G + T +
Sbjct: 647 EAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAI 706
Query: 326 IHLLCRMYKFDEASAEFED-MIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL---CNVMS 381
L R K E EF D MI P Y+T + L + G +K C V S
Sbjct: 707 FKGL-RDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSS 765
Query: 382 SVPR 385
S +
Sbjct: 766 STAQ 769
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 159/372 (42%), Gaps = 26/372 (6%)
Query: 29 DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF------------- 75
+ +S+D V L+ ++ G++ ++ W L + + G LF
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESA 306
Query: 76 --EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LL L ++G +E K E+D P V + IL+N + + V DA
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMD--IQPNVVTFGILINHMCKFRRVDDALEVLE 364
Query: 134 EMR--KEN------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNT 184
+M KE+ V P+VV Y TL++G C++ R + L++ MR + G P+ I YN
Sbjct: 365 KMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNC 424
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+IDG +AG E+ + + P +VT +LV G C+ G + A RG
Sbjct: 425 LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
TY F E AM L+ +M++SG +PD + Y+ L+ + ++ A
Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADAS 544
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
V E+K G D LI CR KF ++M GL P +T+ L
Sbjct: 545 FVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYA 604
Query: 365 KKRGMTALAQKL 376
K G AQK+
Sbjct: 605 SKNGDLKFAQKV 616
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 142/280 (50%), Gaps = 1/280 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEM 135
ILL LC + R + A E H + +P V Y ++NG+F+ + A + EM
Sbjct: 171 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 230
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
++PNVVTY +++ C+ + +D+A+ ++ M K G+ P+ + Y++++ G +G+
Sbjct: 231 LGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQP 290
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+E G + + P +VTY SL+ CK G A KI M RG P TY
Sbjct: 291 KEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTL 350
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ ++ G + + L M+ +G PD ++IL+ K++K+D A+ V +M+ G
Sbjct: 351 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 410
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ ++ +I +LC+ D+A FE MI GL P+ +
Sbjct: 411 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 450
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 6/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ C+ GR+ + + + + + LL G K DA L
Sbjct: 98 YSILIGCCCRAGRLDLG--FAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLR 155
Query: 135 -MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM---RKEGIEPNAIVYNTVIDGLV 190
M + + P+V + L++G C R A+ L+ M R G P+ + Y TVI+G
Sbjct: 156 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 215
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G ++ L P +VTY+S++ CKA ++ A ++L M+ G +P
Sbjct: 216 KEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 275
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ + G+ ++ + KM G P+ +TY L+ LCK + A ++ M
Sbjct: 276 TYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSM 335
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
RG + D+ T L+ E A + M+R G+ P + F L + K+
Sbjct: 336 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 392
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 136/316 (43%), Gaps = 6/316 (1%)
Query: 71 GASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
GAS+ F L + + A S + + P + Y+IL+ R+ +
Sbjct: 55 GASIYSFNRTLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLG 114
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV-KEMRKEGIEPNAIVYNTVID 187
+ K+ +T+ L++G C +R A+ +V + M + P+ ++
Sbjct: 115 FAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLK 174
Query: 188 GLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
GL + R +E ++ G P +V+YT+++ G+ K GD + A M+ R
Sbjct: 175 GLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRR 234
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P+ TY+ K ++ AM + M+++G PD +TY +L C + I
Sbjct: 235 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDI 294
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+M+ G + ++ T L++ LC+ + +A F+ M +RGL P T++ L +
Sbjct: 295 GTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGY 354
Query: 365 KKRGMTALAQKLCNVM 380
+G L ++M
Sbjct: 355 ATKGALVEMHALLDLM 370
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 6/285 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK--ENVTPNVVTYGTLVEGYCRLRRV 160
+ W ++ +N L R F R + VTP++ TY L+ CR R+
Sbjct: 52 RGWGASIYSFNRTLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRL 111
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM-MERFLVCEPGPTMVTYTS 219
D + + K+G AI + ++ GL R + + + R P + + T
Sbjct: 112 DLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTI 171
Query: 220 LVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
L+KG C + A ++L MM G P +Y F K G + A + Y +M+
Sbjct: 172 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 231
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
+P+ +TY ++ LCK +D A++V M G D T + ++H C +
Sbjct: 232 GRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPK 291
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
E M G+ P+ +T++ L + K G A+K+ + M+
Sbjct: 292 EDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMT 336
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L + +PD + T+ ++ Y +G + I T
Sbjct: 245 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCM---TYSSILHGYCSSGQPKEDIGTLNKMR 301
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH---KR---------KELDQSWA-- 106
+ + N + + L++ LCK GR A + F KR + L Q +A
Sbjct: 302 SDGVEPNVVT----YRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATK 357
Query: 107 -------------------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
P V+NIL+ + + + V A + +MR+ + PNVV Y
Sbjct: 358 GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCY 417
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
GT+++ C+ VD A+ ++M EG+ PN I+
Sbjct: 418 GTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIL 451
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 152/302 (50%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++DSLCK G + A F++ + + V Y+ ++ G D + E
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEM--KGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N+ PNVVT+ L++ + + ++ A L EM GI P+ I Y+++IDG + R
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + M++ + P +VTY+ L+ YCKA ++ ++ + S+G + TYN
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT 424
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F + GK+ A L+++M+ G P +TY ILL LC +L A+++ ++M+
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + ++IH +C K D+A + F + +G+ P LT+ + K+G + A
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEAD 544
Query: 375 KL 376
L
Sbjct: 545 ML 546
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 161/335 (48%), Gaps = 8/335 (2%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F+ F L++ C +GRV A + E+ + P V N L+NG V +
Sbjct: 135 FEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM--KYRPNVVTVNTLINGLCLKGRVTE 192
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A M K N +TYG ++ C+ A+ L ++M + I+ + + Y+ VID
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVID 252
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
L + G ++ + + +V Y+S++ G C G + +K+L+ MI R +P
Sbjct: 253 SLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP 312
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ T++ F K GK+ +A LY +M+ G PD +TY L+ CKE++L A Q+
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M +GC+ ++ T ++LI+ C+ + D F ++ +GLV +T+ L F +
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQS 432
Query: 368 GMTALAQKLCNVMSS--VPRSME----LLDSRCKD 396
G +A++L M S VP S+ LLD C +
Sbjct: 433 GKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDN 467
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 161/330 (48%), Gaps = 16/330 (4%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A+ F N ++M K + + ++ LC GR ++
Sbjct: 247 YSIVIDSLCKDGNLDDALSLF---NEMEM-KGIKADVVAYSSIIGGLCNDGRWDDGAKML 302
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R+ + ++ P V ++ L++ + + + +A+ + EM + P+ +TY +L++G+C
Sbjct: 303 --REMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC 360
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT-- 213
+ R+ A +++ M +G EPN + Y+ +I+ +A R + +GM L CE
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVD--NGMR---LFCEISSKGL 415
Query: 214 ---MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
VTY +LV+G+C++G L A ++ + M+SRG PS TY G+++ A+
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALE 475
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ KM +S Y+I++ +C K+D A + + +G D+ T ++I LC
Sbjct: 476 IFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLC 535
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ EA F M G P T+ L
Sbjct: 536 KKGSLSEADMLFRKMKEDGCAPSDCTYNIL 565
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N F L+D K+G++ A E +++ + + AP Y+ L++G+ + +
Sbjct: 308 RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM--VARGIAPDTITYSSLIDGFCKENRL 365
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + M + PN+VTY L+ YC+ +RVD +RL E+ +G+ + + YNT+
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ G ++G+ + + + P++VTY L+ G C G+L+ A +I + M
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ YN KV+DA +L+ + G PD LTY++++ LCK+ L A
Sbjct: 486 ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADM 545
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ ++MK GC T +LI + E+M RG T K
Sbjct: 546 LFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIK 598
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ ++ L + R K F EM + N+ T ++ +CR R++ A +
Sbjct: 67 PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
V K G EPN I ++T+I+G GR E +++R + + P +VT +L+ G C
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCL 186
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++ M+ G + TY K G A++L+RKM E +
Sbjct: 187 KGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK+ LD A+ + EM+ +G D+ + +I LC ++D+ + +MI
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
R ++P+ +TF L D F K G A++L N M + P ++ L+D CK+
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKE 362
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL++S CK RV F + + YN L+ G+ +S + A+ + E
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISS--KGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V P+VVTYG L++G C + +A+ + ++M+K + +YN +I G+ A +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + V P ++TY ++ G CK G L A + + M G PS TYN
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNI 564
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
R V ++ L +M G+ D T +++ +L + +LD
Sbjct: 565 LIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML-SDGRLD 610
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
KV +A++L+ MI+S P + + L + + + DL + KEM G + ++ T
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++I+ CR K A + ++ G P+ +TF L + F G + A L + M
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRM 165
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 163/329 (49%), Gaps = 10/329 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ LCK+ R++ A + + + S P Y IL++G + V++A R E
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEME--GSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGE 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+++ + +VV Y TL+ G+C +DR L EM ++GI PN +VY+ +I+G + G
Sbjct: 71 MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ E + ++ P + TYT ++ G CK G A + +M +G PS TYN
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNV 190
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G + DA ++ M+E G + ++Y+ L+ LC KLD A+++ + G
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Query: 315 CDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
++ D T +I LC+ + D+A ++ MI RG + T L E+ K G+
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDK 310
Query: 373 AQKL---CNVMSSVPRSME---LLDSRCK 395
A +L + + VP S ++D CK
Sbjct: 311 AMELWKRVHKLGLVPSSTTYSVMIDGFCK 339
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 2/264 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + YN ++NG + K ++ A +EM + PN TY L++G C+ RV+ A+RL
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ EM+++G+E + +VY+T+I G G + + + L P +V Y+ L+ G+CK
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A+ +L M RG P TY K G+ A++L+ M E G P +T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y++L+ LCKE + A ++ + M +G +++ + LI LC K DEA F ++
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247
Query: 347 RRG--LVPHYLTFKRLNDEFKKRG 368
G + P +TF + K G
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEG 271
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 4/296 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ LCK GR + A + F E + P+ YN+L+NG + + DA + +
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTE--KGEEPSTVTYNVLINGLCKEGCIGDAFKIFET 210
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG--IEPNAIVYNTVIDGLVEA 192
M ++ VV+Y TL+ G C ++D A++L + ++G +EP+ I +NTVI GL +
Sbjct: 211 MLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKE 270
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR ++ + + + + T L+ Y K+G ++ A ++ K + G +PS TTY
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTY 330
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ F K + A L+ +M SG +P Y+ L+ LCKE L+ A ++ +EMK
Sbjct: 331 SVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ D + ++I + A DM + GL P T+ + K G
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLG 446
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 179/420 (42%), Gaps = 46/420 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K + A LL++ G P+ T+ IL+ + G VE A+
Sbjct: 16 IINGLCKEKRLEKAVDLLVEMEGSSCEPNSF---TYCILMDGLCKEGRVEEAMRLLGEMK 72
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K + ++ L+ C +G + F + L++ +P V VY+ L+NG+
Sbjct: 73 R----KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM--LEKGISPNVVVYSCLINGFC 126
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++A M + + P+V TY ++ G C+ R +A+ L M ++G EP+ +
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 181 VYNTVIDGLVEAG-----------------RFEEVSGMMERFLVCEPG------------ 211
YN +I+GL + G R E VS +C G
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Query: 212 --------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P ++T+ ++++G CK G L+ A +I MI RG + T + + K G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++ AM L++++ + G P TY +++ CK L+ A + MK G L
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
L+ LC+ ++A F++M P ++F + D K G A++L N M +
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQM 426
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++ LCK+GR+ A E + +++ + +IL+ + +S + A W
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTM--IERGSFGNLFTCHILIGEYIKSGIIDKAMELWKR 317
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K + P+ TY +++G+C++ ++ A L M+ G+ P YNT++ L +
Sbjct: 318 VHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESS 377
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ + + P +++ ++ G KAGD+ A ++L M G P TY+
Sbjct: 378 LEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSS 437
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F SK G++E+A + MI SG TPD Y L+K D+++ I + ++M G
Sbjct: 438 FINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMG 497
Query: 315 CDIDLDTSTMLIHLLCR 331
+DL+ + ++ LC
Sbjct: 498 VILDLEITNSILTFLCN 514
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 130/345 (37%), Gaps = 53/345 (15%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEF----ANNLDMVKNFDSGASLFEILLDSLCKQGR 87
S T+ +LI + G + A FE L++V + L+ LC G+
Sbjct: 184 STVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS--------YNTLIMGLCNNGK 235
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + F E P V +N ++ G + + A + M + N+ T
Sbjct: 236 LDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTC 295
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ Y + +D+A+ L K + K G+ P++ Y+ +IDG + G+ R +
Sbjct: 296 HILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
PT+ Y +L+ CK LE A ++ + M P ++N K G +
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHS 415
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L M + G TPD TY + I+
Sbjct: 416 AKELLNDMQQMGLTPDAYTY-----------------------------------SSFIN 440
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR------LNDEFKK 366
L ++ + +EA F+ MI G+ P + LNDE ++
Sbjct: 441 RLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEE 485
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M++ I P+ + YNT+I+GL + R E+ ++ P TY L+ G CK G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+E A ++L M +G Y+ F G ++ L+ +M+E G +P+ + Y
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ CK+ A V M RG D+ T T +I LC+ + +A F+ M +G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
P +T+ L + K G A K+ M + +E++
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRIAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN++ + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 --EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CK+ LD A + K M +D T LI LCR +
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 228 IDDANELFDEM--LVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 346 ENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 406 GSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 167/373 (44%), Gaps = 15/373 (4%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRR-YARAGMVEAAIWTFEFANNLDMVKNFDSGA 72
++C ++ + H++ V++ R+ A V AAI+ + D+
Sbjct: 21 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLY------- 73
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNILLNGWFRSKNVKDAER 130
+F L+ + + G ++ A E + +E + W P T R +L + K K
Sbjct: 74 -VFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRK---VLEHLMKLKYFKLVWG 128
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G +E + L P + TY+ L+ G CK ++ A+++ M+ +G +P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 248
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G D T T LI C+ D A + MI+ + + L + G +
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQS 368
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 369 VDAEKMLREMLSV 381
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 172
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 215
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 216 ------------------SVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 257
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLI 283
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ +T LI + G ++ A + + M K + L+D CK G
Sbjct: 280 PDLITYNT---LIYGLCKKGDLKQA---HHLIDEMSM-KGLKPDKITYTTLIDGCCKDGD 332
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E H+++ + ++ VY L++G R DAE+ EM + P+ TY
Sbjct: 333 LDTAFE--HRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTY 390
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 391 TMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 158/311 (50%), Gaps = 41/311 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKQGIVQESVKLFDRME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYDALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K + +AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E +++ +
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMD 283
Query: 208 CEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT + L+ CK+G L+ AS +LK MI Y F K G+ +
Sbjct: 284 KYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYD 343
Query: 267 DAMNLYRKMIE 277
A+ L K+IE
Sbjct: 344 QAVKLLDKVIE 354
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + + A
Sbjct: 145 GIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D AS + MIR +
Sbjct: 265 LCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKAGQYDQAVKLLD 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ L+ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+ +A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAP 288
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E + +R T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K+ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E + L + + ++ S M L+ S+CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCK 303
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 22/261 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ Y V+ A+ E + N A + LL LC ++ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPN----AITYSTLLPGLCNAEKMSEARSI 277
Query: 95 FHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ +D+ APT ++ L+ +S ++ A M + +V YG L+E
Sbjct: 278 L--KEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYGVLIEN 335
Query: 154 YCRLRRVDRAIRLVKEMRKEGI----------EPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+C+ + D+A++L+ ++ ++ I EP+A YN +I+ L G+ + ++
Sbjct: 336 FCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAETLVR 393
Query: 204 RFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L + PT + +L++G+ + G + A ++LK+M+ R + Y+ + + K
Sbjct: 394 QLLKLGVQDPTALN--TLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKK 451
Query: 263 GKVEDAMNLYRKMIESGYTPD 283
+ DA MIE+ + PD
Sbjct: 452 NEPADAKAALDSMIENDHLPD 472
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 178/363 (49%), Gaps = 17/363 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
++++L ++K+F W L++ ++ + F I+ Y+RA + + AI +F
Sbjct: 113 LVEILGRSKQFAILWDFLIETRESDSSCK-ITNEIFWIIFTAYSRADLPDGAIRSFVRMD 171
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
EF ++ ++LL +LCK+ V+ A ++F + K + T + Y+IL+
Sbjct: 172 EFGIKPSIID--------VDLLLYTLCKKKHVRQAQQFFDQVKS---HFLLTTKTYSILI 220
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NGW + + A + M ++ +++ Y L+E C+ VD A+ + +M + +E
Sbjct: 221 NGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVE 280
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+A Y+ I +A G++++ C P + TY ++K CK +E A ++
Sbjct: 281 PDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQL 340
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MIS G P +YN Y +V A+ L +M + PDR TY+++LK+L +
Sbjct: 341 LDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIR 400
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY-KFDEASAEFEDMIRRGLVPHYL 355
+ D A +V + M + + T +++IH LC+ K +EA F MI G+ P+
Sbjct: 401 IGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDT 460
Query: 356 TFK 358
T +
Sbjct: 461 TIE 463
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ + F ++ W P+V +N L+NG+ R ++ R
Sbjct: 138 FFNILMHRFCKEGEIRLSQSVFDAIRK----WGLRPSVVSFNTLMNGYIRQGDLDKGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 254 NGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MIE D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ S ++M R G VP +T
Sbjct: 374 SVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 13/384 (3%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+++ K DSA + +L+ G +V F LI Y +G + AI +
Sbjct: 35 LIQIVVSRKGKDSASAVFAAILETKGTQRSDIYV----FSGLITAYLESGFLRDAIECYR 90
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FD+ + E L+ K K ++ ++ L+ + ++ +NIL++
Sbjct: 91 LTREHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY--KEILECGYPASLYFFNILMH 144
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + ++ ++ + +RK + P+VV++ TL+ GY R +D+ RL M G++P
Sbjct: 145 RFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQP 204
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I+GL + + +E + + L P VT+T+L+ G+CK G ++ A +I
Sbjct: 205 DVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIY 264
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M+S+ P TYN K G ++ A NL +M G PD++TY L+ CK+
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKD 324
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A + K M +D T LI LC+ + +A +M+ GL P T+
Sbjct: 325 GDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTY 384
Query: 358 KRLNDEFKKRGMTALAQKLCNVMS 381
+ +EF K+G KL M
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 120/253 (47%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L+ +C+ + + + +RK G+ P+ + +NT+++G +
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYI 182
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G ++ + P + TY+ L+ G CK ++ A+++ M+ +G +P+
Sbjct: 183 RQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGV 242
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K GKV+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEM 302
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G D T T LI C+ + A + MI + + + L + G +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRS 362
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 363 VDAEKMLREMLSV 375
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G + L C ++ + L+ +CK G++ + + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS ++N + + G ++ L M SG PD TY +L+ LCKE K+D A
Sbjct: 167 LRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAN 226
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ EM +G + T T LI C+ K D A ++ M+ + L P +T+ L
Sbjct: 227 ELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 365 KKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
K+G A+ L N MS P + L+D CKD
Sbjct: 287 CKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKD 324
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 178/390 (45%), Gaps = 51/390 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL------FEILLDSLCKQGRV 88
T+ ++ +A ++ + F+ DM K +++ + ++D+LCK RV
Sbjct: 70 TYNTVVNGLCKANRIDEGLELFD-----DMEKRYEASHGCEPDVISYSTVIDALCKAQRV 124
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A EYF + + + AP V Y+ L++G + V +A ++++ E++ P + Y
Sbjct: 125 DKAYEYFKRMRAV--GCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYN 182
Query: 149 TLVEGYCRLRRVDRAIRLVKEMR-----------------------------------KE 173
+V G+ R + + L+ M+ K
Sbjct: 183 AVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKS 242
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G +PN + YN + GL +AG+ +E ++ + + P ++TY+S++ G+CKAG ++ A
Sbjct: 243 GKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKA 302
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+ M+ +P P T+ FS+ K +A ++ M+ +G+ P TY++L+
Sbjct: 303 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDC 362
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+C D ++ A+++ +MK + D +T LI LCR + DEA + M +VP+
Sbjct: 363 VCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPN 422
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
L + K+G A C+V+ +V
Sbjct: 423 GAICHALVEVLCKQGEVDEA---CSVLDNV 449
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 163/337 (48%), Gaps = 12/337 (3%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ +I + +AG V+ A FE + + + L L+ LC++GR+ A E F
Sbjct: 2 YTTVINGFCKAGQVDQA---FELLDEMKE-RGVKMDVLLHSTLIQGLCRKGRIDEALEQF 57
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK-----ENVTPNVVTYGTL 150
K + + +P V YN ++NG ++ + + + +M K P+V++Y T+
Sbjct: 58 ---KSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++ C+ +RVD+A K MR G PN + Y+++IDGL + R +E ++ + +
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + Y ++V G+ + G ++L M +GF + +N K + E A
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ ++++SG P+ +TY++ + LCK K+D A ++ EM D+ T + +I C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ + D+A F M+ +PH +TF L F +
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 331
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ +++ CK G+V A E + KE + V +++ L+ G R + +A +
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKE--RGVKMDVLLHSTLIQGLCRKGRIDEALEQFK 58
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK-----EGIEPNAIVYNTVIDG 188
M +E +PNV+TY T+V G C+ R+D + L +M K G EP+ I Y+TVID
Sbjct: 59 SMGEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDA 117
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L +A R ++ +R P +VTY+SL+ G CK ++ A +L + +P
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
YN F + GK + + L M E G+ + + ++ +L L K D+ + A Q +
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ G ++ T + +H LC+ K DEA +M+ + P +T+ + D F K G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 175/427 (40%), Gaps = 65/427 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L K D A+ LL+ G VP + + V +R + +E + E
Sbjct: 149 LIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKG 208
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
++++ F +L +L K + A ++F + L P V YN+ ++G
Sbjct: 209 FGINIID--------FNAMLHALWKNDEQEKACQFFERL--LKSGKKPNVVTYNVAVHGL 258
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA---------------- 163
++ V +A R LEM + VTP+V+TY ++++G+C+ R+D+A
Sbjct: 259 CKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHP 318
Query: 164 -------------------IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
R+ ++M G P YN ++D + A E + +
Sbjct: 319 VTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHK 378
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ P TY L++ C+A ++ A + L +M + +P+ + K G+
Sbjct: 379 MKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 438
Query: 265 VEDA-------------------MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
V++A + + +M+ G PD TY +L+ LC D++D AI
Sbjct: 439 VDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIA 498
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
++M RGC L T T+LI C D+A FE M+ G P T + L+ +
Sbjct: 499 EFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLR 558
Query: 366 KRGMTAL 372
G L
Sbjct: 559 DAGYQDL 565
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 13/384 (3%)
Query: 1 MIKVLAKAKEFDSA---WCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+++ K DSA + +L+ G +V F LI Y +G V AI F
Sbjct: 35 LIQIVVSRKGKDSASAVFAAILETKGTQRSDIYV----FSGLINAYLESGFVRDAIECFR 90
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ FD+ + E L+ K K ++ ++ L+ + ++ +NIL++
Sbjct: 91 LTREHKLRVPFDTCRKVLEHLM----KLKYFKLVWGFY--KEILECGYPASLYFFNILMH 144
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + + A+ + + K + P+VV++ TL+ GY RL +D+ +L M G++P
Sbjct: 145 RFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQP 204
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I+GL + + E + + L P VT+T+L+ G+CK G ++ A +
Sbjct: 205 DVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETY 264
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M+S+ FLP TYN K G ++ A +L +M G PD++TY L+ CKE
Sbjct: 265 KQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKE 324
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LD A ++ + M +D T LI LC+ + +A +M+ GL P T+
Sbjct: 325 GDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTY 384
Query: 358 KRLNDEFKKRGMTALAQKLCNVMS 381
+ +EF K+ A KL M
Sbjct: 385 TMIINEFCKKEDVKTAAKLLKEMQ 408
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G + A F + W P+V +N L+NG+ R ++ +
Sbjct: 138 FFNILMHRFCKEGEIWIAQSVFDSITK----WGLRPSVVSFNTLMNGYIRLGDLDQGFKL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ +++ A L EM +G+ PN + + T+IDG +
Sbjct: 194 KNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ + ++ L P ++TY +L+ G CK GDL+ A +L M +G P T
Sbjct: 254 NGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A L M++ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ A+ ++M R+G VP +T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL+ R+ + G + A F+ + + S F L++ + G + F
Sbjct: 139 FNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVS----FNTLMNGYIRLGDLDQG---F 191
Query: 96 HKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + S P V Y++L+NG + + +A + EM + + PN VT+ TL++G+
Sbjct: 192 KLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGH 251
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +VD A+ K+M + P+ I YNT+I GL + G ++ +++ + P
Sbjct: 252 CKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDK 311
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYT+L+ G CK GDL+ A ++ + M+ Y + G+ DA + R+
Sbjct: 312 ITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLRE 371
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
M+ G PD TY +++ CK++ + A ++ KEM+ +G
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ S +F L+++ + G V+ A E F +E +L
Sbjct: 52 FAAILETKGTQRSDIYVFSGLINAYLESGFVRDAIECFRLTRE--HKLRVPFDTCRKVLE 109
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 110 HLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRP 169
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + +NT+++G + G ++ + P + TY+ L+ G CK + A+ +
Sbjct: 170 SVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLF 229
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K GKV+ AM Y++M+ + PD +TY+ L+ LCK+
Sbjct: 230 NEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKK 289
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + EM+ +G D T T LI C+ D A E M++ + + +
Sbjct: 290 GDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAY 349
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L + G A+K+ M SV
Sbjct: 350 TALISGLCQEGRATDAEKMLREMLSV 375
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 7/346 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL R A+ +E A + N +G+ ILL+ LCKQG+V+ A E
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGS----ILLNGLCKQGKVEKAEEI 373
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K E +YN +NG+ R ++ A M + PN +T+ +L++ +
Sbjct: 374 LKKFTE--NGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKF 431
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C ++ +D+A VK+M ++G+ P+ YNT+IDG + F+ ++E+ P +
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y SL+ CK G + A +L+ MI RG LP+ YN GKV+DA+ + +
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDE 551
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ S +P +TY++L+ LCK+ KL A ++ G D+ T LI
Sbjct: 552 MMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGN 611
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +E M G+ P T+ L K G+ L +KL N M
Sbjct: 612 VSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGI-ELVEKLYNEM 656
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 7/350 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +T+ LI Y + + E + + N S SL ++ LCK G++ A
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL----INCLCKDGKILEA 510
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
R + + P +VYN+L++G VKDA RF+ EM + ++P +VTY L+
Sbjct: 511 EIVL--RDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C+ ++ A + ++ G P+ I YN++I G AG + G+ E
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIK 628
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+ TY L+ G K G +E K+ M+ LP YN +++ G + A +L
Sbjct: 629 PTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++ M++ G PD++TY+ L+ +E KL + MK + DT +L+ C
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCD 747
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ F A + +M+ +P+ L ++ G Q +C+ M+
Sbjct: 748 LKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMN 797
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 132/260 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V +YN+L+ G R K ++DAE+ + EM N+ ++VTY TL++GYC++ +D A ++
Sbjct: 209 PNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKM 268
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M+++ + PN I +N+++ GL + + +E +++ V P TY+ L G +
Sbjct: 269 RERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
D GA ++ + +G + T + K GKVE A + +K E+G D +
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ + C+ ++ AI + M+ G + T LI C M + D+A + M
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 347 RRGLVPHYLTFKRLNDEFKK 366
+G+ P T+ L D + K
Sbjct: 449 EKGVTPSVETYNTLIDGYGK 468
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 165/357 (46%), Gaps = 8/357 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y + G ++AA E + N + F LL LCK ++K A
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIIT----FNSLLSGLCKMRKMKEARSL 303
Query: 95 FHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
KE++ + P Y+IL +G R + A + + ++ + N T L+ G
Sbjct: 304 L---KEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNG 360
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +V++A ++K+ + G+ + ++YNT ++G G + +ER P
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+T+ SL+ +C +++ A + +K M +G PS TYN + K + +
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILE 480
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M E G P+ ++Y L+ LCK+ K+ A V ++M CRG + MLI C +
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVG 540
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
K +A F++M+R + P +T+ L D K+G A+ ++S S +++
Sbjct: 541 KVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVI 597
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 116/238 (48%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
++E+ + Y ++ +L+ + + + MRK G+ PN +YN +I GL
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R + M + ++VTY +L+ GYCK G+L+ A K+ + M + P+
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+N K K+++A +L ++M +G+ PD TY IL L + D + A+++ ++
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+G I+ T ++L++ LC+ K ++A + GLV + + + + + G
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 40/279 (14%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A ++ +L+D C G+VK A +F + R E+ +PT+ YN+L++G + + +AE
Sbjct: 526 AQVYNMLIDGSCMVGKVKDALRFFDEMMRSEI----SPTLVTYNVLIDGLCKKGKLTEAE 581
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR------------------ 171
F ++ +P+V+TY +L+ GY V + + L + M+
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGC 641
Query: 172 -KEGIE---------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
KEGIE P+ +VYN +I E G ++ + + L P +
Sbjct: 642 SKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKM 701
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY SL+ G+ + G L ++ M ++ P TY+ + A YR+M
Sbjct: 702 TYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREM 761
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+E+ + P+ + L L +E +L + EM +G
Sbjct: 762 VENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKG 800
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+F KV D L+ ++ SG+ D Y ++ K L + ++ M+ RG ++
Sbjct: 156 QFVKVVD---LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVF 212
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+LI LCR + +A F++M LV +T+ L D + K G
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVG 260
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRLAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 144/280 (51%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY RL +
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D RL M G++P+ Y+ +I+GL + + ++ + + + LV P VT+T+L
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M G
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD++TY L+ CKE LD A + K M +D T LI LC+ + +A
Sbjct: 314 KPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+M+ GL P T+ + +EF K+G KL M
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 228 MDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 346 ENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 406 GSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 149/326 (45%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ S +F L+ + + G ++ A E + +E + W P + +L
Sbjct: 58 FAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKFWVP-IDTCRKVLE 115
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 116 HLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRP 175
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G +E + L P + TY+ L+ G CK ++ A+++
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 295
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + EM +G D T T LI C+ D A + MI+ + + +
Sbjct: 296 GDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 355
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L + G + A+K+ M SV
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSV 381
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWG 172
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 215
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 216 ------------------SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLI 283
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + L+D CK+G + +A E H+++ + ++ Y L++G +
Sbjct: 310 VKGLKPDKITYTTLIDGCCKEGDLDSAFE--HRKRMIQENIRLDEVAYTALISGLCQEGR 367
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
DAE+ EM + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 185 VIDG 188
+++G
Sbjct: 428 LMNG 431
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ LC +G + +S K ++ +APT+ YN +L+ + + K A
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEK--SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + V +V TY L+ CR R+ + L+++MRK I PN + YNT+I+G G+
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
S ++ L P VT+ +L+ G+ G+ + A K+ MM ++G PS +Y
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + + A Y +M +G R+TY ++ LCK LD A+ + EM G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D D+ T + LI+ C++ +F A + R GL P+ + + L
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 14/343 (4%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
ILIR Y R GM++ ++ F + F+ +L S+ K G + S +
Sbjct: 168 ILIRVYLREGMIQDSLEIFRLMG----LYGFNPSVYTCNAILGSVVKSG--EDVSVWSFL 221
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
++ L + P V +NIL+N + + + +M K P +VTY T++ YC+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPT 213
R AI L+ M+ +G++ + YN +I L + R + + M +R + P
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI----HPN 337
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VTY +L+ G+ G + AS++L M+S G P+ T+N G ++A+ ++
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G TP ++Y +LL LCK + DLA MK G + T T +I LC+
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DEA +M + G+ P +T+ L + F K G A+++
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 157/328 (47%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ +G+V AS+ ++ L +P +N L++G N K+A + +
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEM--LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +TP+ V+YG L++G C+ D A M++ G+ I Y +IDGL + G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ P +VTY++L+ G+CK G + A +I+ + G P+ Y+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G +++A+ +Y MI G+T D T+++L+ LCK K+ A + + M G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + LI+ + +A + F++M + G P + T+ L K G A+
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 375 KLCNVMSSVPRSME------LLDSRCKD 396
K + +VP +++ LL + CK
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G + A+ F K + +LLD LCK A +
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMME----AKGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Query: 95 FHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + K ++ R+ Y +++G ++ + +A EM K+ + P++VTY L+ G
Sbjct: 431 YMRMK---RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C++ R A +V + + G+ PN I+Y+T+I G +E + E ++
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ LV CKAG + A + ++ M S G LP+ +++ + G+ A +++
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M + G+ P TY LLK LCK L A + K + +D L+ +C+
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+A + F +M++R ++P T+ L ++G T +A
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 163/384 (42%), Gaps = 51/384 (13%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
+A+A+EF C+ D I +P+ VS D LI Y +G A F+ +
Sbjct: 564 VAEAEEF--MRCMTSDGI----LPNTVSFDC---LINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
F + SL L LCK G ++ A E F K + TV +YN LL +S N
Sbjct: 615 HPTFFTYGSL----LKGLCKGGHLREA-EKFLKSLHAVPAAVDTV-MYNTLLTAMCKSGN 668
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYN 183
+ A + EM + ++ P+ TY +L+ G CR + AI KE G + PN ++Y
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 184 TVIDGLVEAG-----------------------------------RFEEVSGMMERFLVC 208
+DG+ +AG + E+ + ++
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
GP + TY L+ GY K D+ + + + +I G LP T + + +E
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ + + I G DR T+++L+ C +++ A + K M G +D DT ++ +
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 329 LCRMYKFDEASAEFEDMIRRGLVP 352
L R ++F E+ +M ++G+ P
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISP 932
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 13/342 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVK 89
V + T+ +I + G ++ A+ +M K+ D + L++ CK GR K
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLN-----EMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E + + S P +Y+ L+ R +K+A R + M E T + T+
Sbjct: 496 TAKEIVCRIYRVGLS--PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
LV C+ +V A ++ M +GI PN + ++ +I+G +G + + +
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT TY SL+KG CK G L A K LK + + YN K G + A+
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ +M++ PD TY L+ LC++ K +AI +KE + RG L M +
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN--VLPNKVMYTCFV 731
Query: 330 CRMYKFDEASAEF---EDMIRRGLVPHYLTFKRLNDEFKKRG 368
M+K + A E M G P +T + D + + G
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 170/393 (43%), Gaps = 12/393 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + K+ A L + + +PD T+ LI R G AI FA
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPD---SYTYTSLISGLCRKGKTVIAIL---FAK 712
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGW 119
+ N ++ +D + K G+ KA YF R+++D P + N +++G+
Sbjct: 713 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI-YF--REQMDNLGHTPDIVTTNAMIDGY 769
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R ++ EM +N PN+ TY L+ GY + + V + L + + GI P+
Sbjct: 770 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ ++++ G+ E+ E +++ F+ T+ L+ C G++ A ++K+
Sbjct: 830 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 889
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S G T + ++ + +++ + +M + G +P+ Y L+ LC+
Sbjct: 890 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949
Query: 300 LDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A V +EM C ++ S M + L + K DEA+ M++ LVP +F
Sbjct: 950 IKTAFVVKEEMIAHKICPPNVAESAM-VRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
L K G A +L VMS+ ++L+
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1041
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P++ T +++ K+G+ LK M+ R P T+N G E + L
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+KM +SGY P +TY+ +L CK+ + AI++ MK +G D D+ T MLIH LCR
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + DM +R + P+ +T+ L + F G +A +L N M S
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 148/389 (38%), Gaps = 42/389 (10%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ LI R G ++ AI +E +++ F +L+ SLCK G+V A E+
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAM----ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R P ++ L+NG+ S A + EM K P TYG+L++G C
Sbjct: 572 --RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + A + +K + + ++YNT++ + ++G + + + P
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 216 TYTSLVKGYC------------------------------------KAGDLEGASKILKM 239
TYTSL+ G C KAG + +
Sbjct: 690 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 749
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G P T N +S+ GK+E +L +M P+ TY+ILL K
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ + + + + G D T L+ +C + + I RG+ TF
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSME 388
L + G A L VM+S+ S++
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLD 898
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 153/372 (41%), Gaps = 44/372 (11%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
G+ +P+ V FV +AG +A I+ E +NL + + ++ +D
Sbjct: 718 GNVLPNKVMYTCFV---DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----IDGYS 770
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G+++ ++ + +Q+ P + YNILL+G+ + K+V + + + + P+
Sbjct: 771 RMGKIEKTNDLLPEMG--NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG---------- 193
+T +LV G C ++ ++++K G+E + +N +I G
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 194 -------------------------RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
RF+E ++ P Y L+ G C+ G
Sbjct: 889 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
D++ A + + MI+ P + R +K GK ++A L R M++ P ++
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ + CK + A+++ M G +DL + +LI LC A +E+M
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068
Query: 349 GLVPHYLTFKRL 360
G + + T+K L
Sbjct: 1069 GFLANATTYKAL 1080
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R R + ++ EM K+GI P + Y +I+GL G + + E + + P V
Sbjct: 911 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+++V+ K G + A+ +L+ M+ +P+ ++ K G V +A+ L M
Sbjct: 971 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 1030
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH-LLCRMYK 334
G D ++Y++L+ LC + + LA ++ +EMK G + T LI LL R
Sbjct: 1031 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETA 1090
Query: 335 FDEASAEFEDMIRRGLV 351
F A +D++ RG +
Sbjct: 1091 FSGADIILKDLLARGFI 1107
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 5/242 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWL 133
F +L+ C G + A + L S T +LN R+ +++
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN---RNHRFQESRMVLH 923
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K+ ++P Y L+ G CR+ + A + +EM I P + + ++ L + G
Sbjct: 924 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ +E + ++ L + PT+ ++T+L+ CK G++ A ++ +M + G +YN
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-ILCKEDKLDLAIQVSKEMKC 312
G + A LY +M G+ + TY L++ +L +E A + K++
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1103
Query: 313 RG 314
RG
Sbjct: 1104 RG 1105
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC+ G +K A + K + + P + ++ + +A M K
Sbjct: 940 LINGLCRVGDIKTA--FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--- 194
+ P + ++ TL+ C+ V A+ L M G++ + + YN +I GL G
Sbjct: 998 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1057
Query: 195 ----FEEVSGMMERFLVCEPGPTMVTYTSLVKGY-CKAGDLEGASKILKMMISRGFLPS 248
+EE+ G + FL TY +L++G + GA ILK +++RGF+ S
Sbjct: 1058 AFELYEEMKG--DGFL-----ANATTYKALIRGLLARETAFSGADIILKDLLARGFITS 1109
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ LC +G + +S K ++ +APT+ YN +L+ + + K A
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEK--SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + V +V TY L+ CR R+ + L+++MRK I PN + YNT+I+G G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
S ++ L P VT+ +L+ G+ G+ + A K+ MM ++G PS +Y
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + + A Y +M +G R+TY ++ LCK LD A+ + EM G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D D+ T + LI+ C++ +F A + R GL P+ + + L
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 14/343 (4%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
ILIR Y R GM++ ++ F + F+ +L S+ K G + S +
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMG----LYGFNPSVYTCNAILGSVVKSG--EDVSVWSFL 181
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
++ L + P V +NIL+N + + + +M K P +VTY T++ YC+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPT 213
R AI L+ M+ +G++ + YN +I L + R + + M +R + P
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI----HPN 297
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VTY +L+ G+ G + AS++L M+S G P+ T+N G ++A+ ++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G TP ++Y +LL LCK + DLA MK G + T T +I LC+
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DEA +M + G+ P +T+ L + F K G A+++
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 157/328 (47%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ +G+V AS+ ++ L +P +N L++G N K+A + +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEM--LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +TP+ V+YG L++G C+ D A M++ G+ I Y +IDGL + G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ P +VTY++L+ G+CK G + A +I+ + G P+ Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G +++A+ +Y MI G+T D T+++L+ LCK K+ A + + M G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + LI+ + +A + F++M + G P + T+ L K G A+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 375 KLCNVMSSVPRSME------LLDSRCKD 396
K + +VP +++ LL + CK
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G + A+ F K + +LLD LCK A +
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMME----AKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 95 FHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + K ++ R+ Y +++G ++ + +A EM K+ + P++VTY L+ G
Sbjct: 391 YMRMK---RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C++ R A +V + + G+ PN I+Y+T+I G +E + E ++
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ LV CKAG + A + ++ M S G LP+ +++ + G+ A +++
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M + G+ P TY LLK LCK L A + K + +D L+ +C+
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+A + F +M++R ++P T+ L ++G T +A
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 667
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 163/384 (42%), Gaps = 51/384 (13%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
+A+A+EF C+ D I +P+ VS D LI Y +G A F+ +
Sbjct: 524 VAEAEEF--MRCMTSDGI----LPNTVSFDC---LINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
F + SL L LCK G ++ A E F K + TV +YN LL +S N
Sbjct: 575 HPTFFTYGSL----LKGLCKGGHLREA-EKFLKSLHAVPAAVDTV-MYNTLLTAMCKSGN 628
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYN 183
+ A + EM + ++ P+ TY +L+ G CR + AI KE G + PN ++Y
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 184 TVIDGLVEAG-----------------------------------RFEEVSGMMERFLVC 208
+DG+ +AG + E+ + ++
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
GP + TY L+ GY K D+ + + + +I G LP T + + +E
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ + + I G DR T+++L+ C +++ A + K M G +D DT ++ +
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Query: 329 LCRMYKFDEASAEFEDMIRRGLVP 352
L R ++F E+ +M ++G+ P
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISP 892
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 13/342 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVK 89
V + T+ +I + G ++ A+ +M K+ D + L++ CK GR K
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLN-----EMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E + + S P +Y+ L+ R +K+A R + M E T + T+
Sbjct: 456 TAKEIVCRIYRVGLS--PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
LV C+ +V A ++ M +GI PN + ++ +I+G +G + + +
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT TY SL+KG CK G L A K LK + + YN K G + A+
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ +M++ PD TY L+ LC++ K +AI +KE + RG L M +
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN--VLPNKVMYTCFV 691
Query: 330 CRMYKFDEASAEF---EDMIRRGLVPHYLTFKRLNDEFKKRG 368
M+K + A E M G P +T + D + + G
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 170/393 (43%), Gaps = 12/393 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + K+ A L + + +PD T+ LI R G AI FA
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPD---SYTYTSLISGLCRKGKTVIAIL---FAK 672
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGW 119
+ N ++ +D + K G+ KA YF R+++D P + N +++G+
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI-YF--REQMDNLGHTPDIVTTNAMIDGY 729
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R ++ EM +N PN+ TY L+ GY + + V + L + + GI P+
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ ++++ G+ E+ E +++ F+ T+ L+ C G++ A ++K+
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 849
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S G T + ++ + +++ + +M + G +P+ Y L+ LC+
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 300 LDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A V +EM C ++ S M + L + K DEA+ M++ LVP +F
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAM-VRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
L K G A +L VMS+ ++L+
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P++ T +++ K+G+ LK M+ R P T+N G E + L
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+KM +SGY P +TY+ +L CK+ + AI++ MK +G D D+ T MLIH LCR
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + DM +R + P+ +T+ L + F G +A +L N M S
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 148/389 (38%), Gaps = 42/389 (10%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ LI R G ++ AI +E +++ F +L+ SLCK G+V A E+
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAM----ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R P ++ L+NG+ S A + EM K P TYG+L++G C
Sbjct: 532 --RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + A + +K + + ++YNT++ + ++G + + + P
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 216 TYTSLVKGYC------------------------------------KAGDLEGASKILKM 239
TYTSL+ G C KAG + +
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 709
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G P T N +S+ GK+E +L +M P+ TY+ILL K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ + + + + G D T L+ +C + + I RG+ TF
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSME 388
L + G A L VM+S+ S++
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLD 858
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 153/372 (41%), Gaps = 44/372 (11%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
G+ +P+ V FV +AG +A I+ E +NL + + ++ +D
Sbjct: 678 GNVLPNKVMYTCFV---DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----IDGYS 730
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G+++ ++ + +Q+ P + YNILL+G+ + K+V + + + + P+
Sbjct: 731 RMGKIEKTNDLLPEMG--NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG---------- 193
+T +LV G C ++ ++++K G+E + +N +I G
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 194 -------------------------RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
RF+E ++ P Y L+ G C+ G
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
D++ A + + MI+ P + R +K GK ++A L R M++ P ++
Sbjct: 909 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ + CK + A+++ M G +DL + +LI LC A +E+M
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 349 GLVPHYLTFKRL 360
G + + T+K L
Sbjct: 1029 GFLANATTYKAL 1040
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R R + ++ EM K+GI P + Y +I+GL G + + E + + P V
Sbjct: 871 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+++V+ K G + A+ +L+ M+ +P+ ++ K G V +A+ L M
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH-LLCRMYK 334
G D ++Y++L+ LC + + LA ++ +EMK G + T LI LL R
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETA 1050
Query: 335 FDEASAEFEDMIRRGLV 351
F A +D++ RG +
Sbjct: 1051 FSGADIILKDLLARGFI 1067
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 5/242 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWL 133
F +L+ C G + A + L S T +LN R+ +++
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN---RNHRFQESRMVLH 883
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K+ ++P Y L+ G CR+ + A + +EM I P + + ++ L + G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ +E + ++ L + PT+ ++T+L+ CK G++ A ++ +M + G +YN
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-ILCKEDKLDLAIQVSKEMKC 312
G + A LY +M G+ + TY L++ +L +E A + K++
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1063
Query: 313 RG 314
RG
Sbjct: 1064 RG 1065
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC+ G +K A + K + + P + ++ + +A M K
Sbjct: 900 LINGLCRVGDIKTA--FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--- 194
+ P + ++ TL+ C+ V A+ L M G++ + + YN +I GL G
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 195 ----FEEVSGMMERFLVCEPGPTMVTYTSLVKGY-CKAGDLEGASKILKMMISRGFLPS 248
+EE+ G + FL TY +L++G + GA ILK +++RGF+ S
Sbjct: 1018 AFELYEEMKG--DGFL-----ANATTYKALIRGLLARETAFSGADIILKDLLARGFITS 1069
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 163/334 (48%), Gaps = 9/334 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD VS +T + +++ + EA E + K A I++ CK+G
Sbjct: 345 LPDVVSYNTLINGCLEWSK--ISEAFKLLEEMSE-----KGVKPNAVTHNIMVKWYCKEG 397
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ AS K +E ++P YN L+NG+ ++ N+ +A R EM ++N+ + VT
Sbjct: 398 KMDDASNTITKMEE--SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
T++ CR ++++ A +L+ RK G + + Y T+I G + G + + +
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK 515
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E P+ VTY ++ G C+ G E A L ++ G LP TTYN + + G VE
Sbjct: 516 EKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVE 575
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + KM+E+ + PD T +ILL+ LC E L+ A+++ +G ID T LI
Sbjct: 576 KAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLI 635
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LC+ + D+A +M + L P + T+ +
Sbjct: 636 TSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 6/353 (1%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ ++ +T + + RY + V + F A L +V N ++ F I++ C + +
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNT----FNIVIYGYCLENK 223
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
K A E+ + + + S P YN +L+ + + DA ++M+ + PN TY
Sbjct: 224 FKDAVEFLNVMGKYNCS--PDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTY 281
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
LV GYC++ + A +++ M + + P+ YN +I+GL GR EE + +
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+ P +V+Y +L+ G + + A K+L+ M +G P+ T+N +++ K GK++D
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A N KM ESG++PD +TY+ L+ CK + A + EM + +D T ++
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LCR K +EA +RG +++ L + K G A KL + M
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 182/405 (44%), Gaps = 21/405 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K A LL+D +P+ ++T+ IL+ Y + G W E AN
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPN---RNTYNILVYGYCKMG------WLKEAAN 299
Query: 61 NLDMV--KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLN 117
++++ N + +L++ LC +GR++ A F R E++ P V YN L+N
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA---FKLRDEMENLKLLPDVVSYNTLIN 356
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G + +A + EM ++ V PN VT+ +V+ YC+ ++D A + +M + G P
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+I+G +AG E M+ VT ++++ C+ LE A K+L
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
RG+ +Y + K G V+ A+ L+ +M E P +TY+ ++ LC+
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K + AI E+ G D T ++H CR ++A M+ P T
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCKD 396
L G+ A KL N S ++++ L+ S CK+
Sbjct: 597 NILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 145/365 (39%), Gaps = 67/365 (18%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI Y +AG + A T + KN + +L +LC++ +
Sbjct: 416 PDCVTYNT---LINGYCKAGNMGEAFRTMDEMGR----KNMKMDSVTLNTILRTLCREKK 468
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + ++ + + Y L+ G+F+ NV A + W EM+++ + P+ VTY
Sbjct: 469 LEEAYKLLSSARK--RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 148 G-----------------------------------TLVEGYCRLRRVDRAIRLVKEMRK 172
T++ GYCR V++A + +M +
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+P+ N ++ GL G E+ + ++ VTY +L+ CK G L+
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR-------- 284
A +L M + P TYN + G++ +A KM+E G PD+
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNE 706
Query: 285 ---------------LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ Y +K LC E K A+++ E K +G +D T L+ L
Sbjct: 707 TVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766
Query: 330 CRMYK 334
+ K
Sbjct: 767 IKRRK 771
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
+P+ T + Y + + A ++ K+M++ + PN + NT+++ LV VS
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190
Query: 200 GMMERF---LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E F + P + T+ ++ GYC + A + L +M P TYN
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G++ DA +L M G P+R TY+IL+ CK L A V + M
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ T MLI+ LC + +EA ++M L+P +++ L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 156/329 (47%), Gaps = 7/329 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+L LC + A + F + + +P V YN +++G+F+ A + E
Sbjct: 231 YSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE 290
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++ V P+VVTY +++ C+ R +D+A ++++M G +P+ + YN +I G GR
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + M + P +V S + CK G + A++I M ++G P +Y
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G D + L+ M +G D ++IL+ K +D A+ + EM+ +G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T + +I RM + +A +F M+ RG+ P+ + + F G A+
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530
Query: 375 KLCNVM--SSVPRS-----MELLDSRCKD 396
+L + M +PR +++S CKD
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKD 559
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 5/294 (1%)
Query: 78 LLDSLCKQGRVK-AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
LL LC R + A + H+ EL P V Y+I+L G + + A + M
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSEL--GCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255
Query: 137 KEN--VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
KE +PNVV Y T++ G+ + +A L EM ++G++P+ + YN +ID L +A
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ ++ + P VTY ++ GY G L+ A+K+ + M SRG +P+ N
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K G+ ++A ++ M G+ PD ++Y LL E I + MK G
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D +LIH + D+A F +M ++G+ P +T+ + F + G
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 140/310 (45%), Gaps = 3/310 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ K+G A FH+ Q P V YN++++ +++ + AE +
Sbjct: 268 YNTVIHGFFKEGETGKACSLFHEMTR--QGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+ VTY ++ GY L R+ A ++ ++M+ G+ PN ++ N+ + L + GR
Sbjct: 326 MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGR 385
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + P +V+Y +L+ GY G + M S G +N
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++K G V+DAM ++ +M + G +PD +TY ++ + +L A++ +M RG
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV-PHYLTFKRLNDEFKKRGMTALA 373
+ +I C +A +MI +G+ P + F + + K G A
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565
Query: 374 QKLCNVMSSV 383
+ ++++ +
Sbjct: 566 HDIFDLVTDI 575
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 197/497 (39%), Gaps = 114/497 (22%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A +L PD V T+ +I YA G ++ A F
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTNGAQPDTV---TYNCMIHGYATLGRLKEAAKMFRKMK 362
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF-------HK----------RKELDQ 103
+ ++ N + L SLCK GR K A+E F HK +
Sbjct: 363 SRGLIPNI----VICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASE 418
Query: 104 SW----------------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
W A RV+NIL++ + + V DA + EM+++ V+P+VVTY
Sbjct: 419 GWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTY 478
Query: 148 GTLVEGYCRLRR-----------VDRAIR------------------------LVKEMRK 172
T++ + R+ R V R I+ LV EM
Sbjct: 479 STVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMIN 538
Query: 173 EGI-EPNAIVYNTVIDGLVEAGR-------FEEVSGMMERFLV----------CEPG--- 211
+GI P+ + +N+VI+ L + GR F+ V+ + ER V C G
Sbjct: 539 KGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMD 598
Query: 212 ---------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+VTY++L+ GY K G + + + M +G P+ TY
Sbjct: 599 KAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ G+ A + +MIESG T Y I+L LC+ + D AI + +++
Sbjct: 659 AGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVK 718
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ +I+ + ++ + +EA F + GL+P+ T+ + K G A
Sbjct: 719 FSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDAN-- 776
Query: 377 CNVMSSVPRSMELLDSR 393
N+ SS+ +S + SR
Sbjct: 777 -NMFSSMEKSGIVPGSR 792
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 137 KENVTPNVV-----TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+E P VV TY L++ CR RR D + L + + G++ + I +T++ L
Sbjct: 145 REQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCY 204
Query: 192 AGRFEE-VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
A R EE V+ ++ R P + +Y+ ++KG C + A + +MM G SP
Sbjct: 205 ANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPN 264
Query: 251 --TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
YN F K G+ A +L+ +M G PD +TY++++ LCK +D A V +
Sbjct: 265 VVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+M G D T +IH + + EA+ F M RGL+P+ + K G
Sbjct: 325 QMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHG 384
Query: 369 MTALAQKLCNVMSS 382
+ A ++ + M++
Sbjct: 385 RSKEAAEIFDSMTA 398
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 148/334 (44%), Gaps = 16/334 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L KAKE S +++K G PD V F +I + G V A F+ ++
Sbjct: 526 LVKAKELVSE---MINK--GIPRPDIV---FFNSVINSLCKDGRVMDAHDIFDLVTDIGE 577
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSK 123
+ + F L+D C G++ A F ++ T + Y+ LL+G+F++
Sbjct: 578 RPDVIT----FTSLIDGYCLVGKMDKA---FKILDAMEVVGVETDIVTYSTLLDGYFKNG 630
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ D + EM+++ V PN VTYG ++ G R R A + EM + G +Y
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
++ GL +E + ++ ++ +++ K E A ++ + +
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G LP+ +TY K G VEDA N++ M +SG P + ++++L ++ ++ A
Sbjct: 751 GLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
++ + ++ T+++++ L R K+ E
Sbjct: 811 GNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHE 844
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 160/324 (49%), Gaps = 9/324 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ +T LI+ G ++ A++ F + + + + F + L++ LCK G
Sbjct: 161 PDAITLNT---LIKGLCFCGEIKRALY---FHDKV-VAQGFQLDQVSYGTLINGLCKAGE 213
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
KA + RK S P V +Y +++ ++K V DA + EM + ++PNV TY
Sbjct: 214 TKAVARLL--RKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTY 271
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G+C + + A L+ EM+ + I P+ +N +ID L + G+ +E + E
Sbjct: 272 NTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKH 331
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTYTSL+ G CK LE A + K M +G P +Y K G++E+
Sbjct: 332 KNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 391
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A ++ ++ GY + TY++++ LCK + + +M+ +GC D T +I
Sbjct: 392 AKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIIC 451
Query: 328 LLCRMYKFDEASAEFEDMIRRGLV 351
L + D+A +MI RGL+
Sbjct: 452 ALFEKDENDKAEKFLREMIARGLL 475
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 148/326 (45%), Gaps = 6/326 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T ILI + + A F AN L + + A L+ LC G +K A Y
Sbjct: 130 TLNILINCFCHLAHITFAFSVF--ANILK--RGYHPDAITLNTLIKGLCFCGEIKRAL-Y 184
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
FH K + Q + Y L+NG ++ K R ++ +V P+VV Y T++
Sbjct: 185 FHD-KVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCL 243
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +RV A L EM +GI PN YNT+I G G +E ++ + P +
Sbjct: 244 CKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDV 303
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
T+ L+ K G ++ A + + M + P+ TY K +E A+ L +K
Sbjct: 304 YTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKK 363
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M E G PD +Y ILL LCK +L+ A Q + + +G +++ T ++I+ LC+
Sbjct: 364 MKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGL 423
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
F + M +G +P +TFK +
Sbjct: 424 FGDVMDLKSKMEGKGCMPDAITFKTI 449
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 146/313 (46%), Gaps = 7/313 (2%)
Query: 62 LDMVKNFDSGA-----SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ + K F S IL++ C + A F L + + P N L+
Sbjct: 113 ISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVF--ANILKRGYHPDAITLNTLI 170
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G +K A F ++ + + V+YGTL+ G C+ RL++++ ++
Sbjct: 171 KGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVK 230
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ ++Y T+I L + R + + +V P + TY +L+ G+C G+L+ A +
Sbjct: 231 PDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSL 290
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L M + P T+N K GK+++A++L+ +M P+ +TY L+ LCK
Sbjct: 291 LNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCK 350
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
L+ AI + K+MK +G D+ + T+L+ LC+ + + A F+ ++ +G + T
Sbjct: 351 NHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRT 410
Query: 357 FKRLNDEFKKRGM 369
+ + + K G+
Sbjct: 411 YNVMINGLCKAGL 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 7/304 (2%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
R L + PT NIL + ++K+ + + + VTPN+ T L+ +C L
Sbjct: 83 RMLLMRPPPPTFHFDNIL-SSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHL 141
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+ A + + K G P+AI NT+I GL G + ++ + V+Y
Sbjct: 142 AHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSY 201
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ G CKAG+ + +++L+ + P Y K +V DA +LY +MI
Sbjct: 202 GTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIV 261
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G +P+ TY+ L+ C L A + EMK + + D+ T +LI L + K DE
Sbjct: 262 KGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDE 321
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLD 391
A + FE+M + + P+ +T+ L D K A LC + V LLD
Sbjct: 322 AISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLD 381
Query: 392 SRCK 395
+ CK
Sbjct: 382 ALCK 385
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F+ +L SL K F + + P + NIL+N + ++ A +
Sbjct: 96 FDNILSSLVKNKHYLTVISLFKQFQS--NGVTPNLCTLNILINCFCHLAHITFAFSVFAN 153
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ K P+ +T TL++G C + RA+ ++ +G + + + Y T+I+GL +AG
Sbjct: 154 ILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGE 213
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ V+ ++ + P +V YT+++ CK + A + MI +G P+ TYN
Sbjct: 214 TKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNT 273
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F G +++A +L +M PD T++IL+ L KE K+D AI + +EMK +
Sbjct: 274 LIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKN 333
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T T LI LC+ + + A A + M +G+ P ++ L D K G
Sbjct: 334 MFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 387
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 8/325 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C R+ A + E+ + P + L++G F +A +M +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEM--GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P++VTYGT+V G C+ +D A+ L+K+M K IE + ++YNT+IDGL + ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ P + TY+SL+ C G AS++L MI R P+ T++
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K GK+ +A LY +MI+ PD TY L+ C D+LD A + + M + C
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T + LI C+ + +E F +M +RGLV + +T+ L F + AQ +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 378 NVMSSV---PRSME---LLDSRCKD 396
M SV P + LLD CK+
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKN 481
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 156/308 (50%), Gaps = 4/308 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ ++D LCK + A F E+D + P V Y+ L++ DA R
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLF---TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M + + PNVVT+ L++ + + ++ A +L EM K I+P+ Y+++I+G
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R +E M E + + P +VTY++L+KG+CKA +E ++ + M RG + + TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
F + ++A ++++M+ G P+ LTY+ILL LCK KL A+ V + ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+ D+ T ++I +C+ K ++ F ++ +G+ P+ + + + F ++G
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 373 AQKLCNVM 380
A L M
Sbjct: 557 ADSLLKKM 564
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 135/267 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ++NG + ++ A +M K + +VV Y T+++G C+ + +D A+ L
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM +GI P+ Y+++I L GR+ + S ++ + + P +VT+++L+ + K
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ MI R P TY+ F ++++A +++ MI P+ +T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+K CK +++ +++ +EM RG + T T LIH + D A F+ M+
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALA 373
G+ P+ LT+ L D K G A A
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 146/290 (50%), Gaps = 10/290 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR AS +++ P V ++ L++ + + + +AE+ + E
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDM--IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++ P++ TY +L+ G+C R+D A + + M + PN + Y+T+I G +A R
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 195 FEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
EE M +R LV G T VTYT+L+ G+ +A D + A + K M+S G P+
Sbjct: 414 VEEGMELFREMSQRGLV---GNT-VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K GK+ AM ++ + S PD TY+I+++ +CK K++ ++ +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G ++ +I CR +EA + + M G +P+ T+ L
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 160/347 (46%), Gaps = 15/347 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + A LL D I P+ V TF LI + + G + A ++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVV---TFSALIDAFVKEGKLVEAEKLYD--- 352
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + D + L++ C R+ A F + + P V Y+ L+ G+
Sbjct: 353 --EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYSTLIKGF 408
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V++ + EM + + N VTY TL+ G+ + R D A + K+M G+ PN
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN ++DGL + G+ + + E P + TY +++G CKAG +E ++
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ YN F + G E+A +L +KM E G P+ TY+ L++ ++
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ + ++ KEM R C D ST I L+ M F DM+
Sbjct: 589 REASAELIKEM--RSCGFAGDAST--IGLVTNMLHDGRLDKSFLDML 631
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 2/282 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ +N LL+ + + +M+ ++ ++ TY + +CR ++ A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + +++++G + R + ++++ + P T+T+L+ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
A ++ M+ RG P TY K G ++ A++L +KM + D +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ LCK +D A+ + EM +G D+ T + LI LC ++ +AS DMI
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
R + P+ +TF L D F K G A+KL + M + RS++
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSID 360
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+VD A+ L +M K P+ + +N ++ + + +FE V + E+ + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+ +C+ L A +L M+ G+ P T + + ++ DA+ L +M+E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
GY PD T+ L+ L +K A+ + +M RGC DL T +++ LC+ D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 339 SAEFEDM 345
+ + M
Sbjct: 243 LSLLKKM 249
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P++V + L+ K E + + M + G TY+ F F + ++ A+
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ KM++ GY PD +T LL C ++ A+ + +M G D T T LIH L
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
K EA A + M++RG P +T+ + + KRG LA L M
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 --EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + + + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G P +T+ L
Sbjct: 380 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVL 428
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + +M +++ P+++TY
Sbjct: 228 MDGANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 346 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 406 GSKLLKEMHRDGHAPSVVTYNVLM 429
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 150/326 (46%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ N S +F L+ + + G ++ A E + +E + W P +L +
Sbjct: 58 FAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRKVLEH 116
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 117 -LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRP 175
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G +E + L P + TY+ L+ G CK ++GA+++
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELF 235
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + EM +G D T T LI C+ D A + MI+ + + +
Sbjct: 296 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L + G + A+K+ M SV
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSV 381
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
SL E+++ ++G+ +AS F E + + V++ L+ + S ++DA +
Sbjct: 40 SLIEVVVS---RKGK-GSASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECY 95
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
R+ + T ++E +L+ +E+ + G + +N ++ +
Sbjct: 96 RLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKD 155
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G + + P++V+Y +L+ GY + GDL+ ++ M++ G P TY
Sbjct: 156 GDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY 215
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K K++ A L+ +M+ G P+ +T+ L+ CK ++DLA+++ K+M
Sbjct: 216 SVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ DL T LI+ LC+ +A ++M +GL P T+ L D K G
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 9/223 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + D A L + + VP+ V TF LI + + G V+ A+ ++
Sbjct: 218 LINGLCKESKMDGANELFDEMLVKGLVPNGV---TFTTLIDGHCKNGRVDLAMEIYKQML 274
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++ + + + L+ LCK+G +K A + + + P Y L++G
Sbjct: 275 SQSLLPDLIT----YNTLIYGLCKKGDLKQAHDLIDEMSM--KGLKPDKFTYTTLIDGCC 328
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++ A M +EN+ + V Y L+ G C+ R A ++++EM G++P+
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 388
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
Y +I+ + G + S +++ P++VTY L+ G
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 150/358 (41%), Gaps = 11/358 (3%)
Query: 11 FDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS 70
D AW LL I E +S F LI Y++ G+ E A + N L + +
Sbjct: 407 LDDAWELLRGAI---EQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPS--- 460
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+S F L+ LC QGR+ A + + + I L+ FR N A +
Sbjct: 461 -SSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTS---FTICLDASFREGNAVCALK 516
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
W +M K + P+ + + + G CRL V+ A + EM GI PN YN++I L
Sbjct: 517 CWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALC 576
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AG E + + P + T L+ G C+ G LE +L M S G P
Sbjct: 577 RAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTV 636
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN + + + AMN KM+ +G PD TY+I + LC L+ A +V E+
Sbjct: 637 TYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDEL 696
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
GC D T L+ +C D A +I+ P+ +T F K+G
Sbjct: 697 VAMGCPPDSVTYNTLMDGICSDV-LDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQG 753
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 168/428 (39%), Gaps = 86/428 (20%)
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQS 104
R+G V AA FE + + F ++ C +G V+ AS E
Sbjct: 196 RSGEVHAAWNVFEEM----AARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEF--G 249
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P V YNIL+ G +DA + + EM + P VVTY LV+ C R+ A
Sbjct: 250 IVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEAR 309
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSL 220
RL EM + GI+ N I +N +IDG + GR ++ M R LV P T+ +
Sbjct: 310 RLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLV----PDSCTFNII 365
Query: 221 VKGYCKAGD--------------------------------LEGASKILKMMISRGFLPS 248
G K G L+ A ++L+ I +G S
Sbjct: 366 AAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLS 425
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
T +N +SK G E+A LYR M + G P T++ L+ LC + +LD A + +
Sbjct: 426 VTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLE 485
Query: 309 EMKCRG-C-----DIDLDTS----------------------------TMLIHLLCRMYK 334
M +G C I LD S + I+ LCR+
Sbjct: 486 HMVSKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDY 545
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VP---RSME 388
+EA F +M RG+VP+ T+ + + G A KL M VP S
Sbjct: 546 VNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNI 605
Query: 389 LLDSRCKD 396
L+D C++
Sbjct: 606 LIDGLCRE 613
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 170/437 (38%), Gaps = 77/437 (17%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
++ E +AW + + P TF +I + G+V A +V
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLA---TFNAMILGFCHRGLVRVASGLLGIMGEFGIVP 252
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNV 125
N S + IL+ C G + A + F +E+ +S PTV YNIL++ +
Sbjct: 253 NVCS----YNILIKGHCVFGWSRDAFKLF---EEMHRSGCEPTVVTYNILVDVLCHEGRM 305
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A R + EM + + N +T+ L++GY + R+D+A +EM+ G+ P++ +N +
Sbjct: 306 PEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNII 365
Query: 186 IDGLVEAGRFEEVSGMMERF-----------LVC--------------------EPGPTM 214
G + G ++ + F LVC + P
Sbjct: 366 AAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLS 425
Query: 215 VT-YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VT + +L+ Y K G E A ++ ++M G PS +T+NY G++++A L
Sbjct: 426 VTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLE 485
Query: 274 KMIESGY----------------------------------TPDRLTYHILLKILCKEDK 299
M+ GY PD + + + LC+ D
Sbjct: 486 HMVSKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDY 545
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A Q EM RG + T +I LCR EA ++M + GLVP T
Sbjct: 546 VNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNI 605
Query: 360 LNDEFKKRGMTALAQKL 376
L D + G + L
Sbjct: 606 LIDGLCREGKLEMVDNL 622
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%)
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A+ ++ +R+ G P+ ++ L +G + E P P++ T+ +++
Sbjct: 168 ALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAMIL 227
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G+C G + AS +L +M G +P+ +YN + FG DA L+ +M SG P
Sbjct: 228 GFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEP 287
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+TY+IL+ +LC E ++ A ++ EM G + T +LI + + D+A A +
Sbjct: 288 TVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAY 347
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+M RGLVP TF + K G A
Sbjct: 348 REMKARGLVPDSCTFNIIAAGAYKFGHAA 376
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 10/263 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PDF++ F I R V A F +V N + + ++ +LC+ G
Sbjct: 528 PDFIA---FSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFT----YNSIISALCRAGN 580
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + ++ P + NIL++G R ++ + L+M +TP+ VTY
Sbjct: 581 MTEALKLQQNMRQ--NGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTY 638
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T++ YCR + ++ A+ + +M G EP+ YN + L + +++ +
Sbjct: 639 NTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVA 698
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY +L+ G C + L+ A + +I F P+ T N F +F K G +
Sbjct: 699 MGCPPDSVTYNTLMDGIC-SDVLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKR 757
Query: 268 AMNLYRKMIESGYTPDRLTYHIL 290
A+ K+ E + D T +I+
Sbjct: 758 ALMWAEKLREDSFVFDDATRNII 780
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 110/264 (41%), Gaps = 3/264 (1%)
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
FRS V A + EM P++ T+ ++ G+C V A L+ M + GI PN
Sbjct: 195 FRSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNV 254
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
YN +I G G + + E PT+VTY LV C G + A ++
Sbjct: 255 CSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDE 314
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M G + T+N ++K G+++ A YR+M G PD T++I I K
Sbjct: 315 MAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNI---IAAGAYK 371
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A Q+ + G + D ML+ LC + D+A I +G F
Sbjct: 372 FGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNA 431
Query: 360 LNDEFKKRGMTALAQKLCNVMSSV 383
L + K G+ A +L +M+ +
Sbjct: 432 LIAAYSKEGLHEEAFELYRIMNKL 455
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 7/233 (3%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+ L+ + + +A +R+ TP++ L+ R V A + +EM
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLE 231
G P+ +N +I G G SG++ ++ E G P + +Y L+KG+C G
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLLG--IMGEFGIVPNVCSYNILIKGHCVFGWSR 271
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A K+ + M G P+ TYN G++ +A L+ +M + G + +T+++L+
Sbjct: 272 DAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLI 331
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
K ++D A +EMK RG + D+ T I + YKF A+ D
Sbjct: 332 DGYAKTGRMDQACAAYREMKARG--LVPDSCTFNI-IAAGAYKFGHAAQLVHD 381
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 146/281 (51%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY RL +
Sbjct: 130 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 189
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D RL M G++P+ Y+ +I+GL + + ++ + + + LV P VT+T+L
Sbjct: 190 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 249
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M G
Sbjct: 250 IDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGL 309
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD++TY L+ CKE LD A + K M +D T LI LC+ + +A
Sbjct: 310 KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEK 369
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+M+ GL P+ T+ + +EF K+G KL M
Sbjct: 370 MLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQ 410
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 140 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 195
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 196 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 255
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + +R L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 256 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 315
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 316 YTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREML 375
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G + T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 376 SVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 424
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 171 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 223
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + M +++ P+++TY
Sbjct: 224 MDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITY 281
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G + +R +
Sbjct: 282 NTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQ 341
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P+ TY F K G V
Sbjct: 342 ENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWK 401
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 402 GSKLLKEMQRDGHVPSVVTYNVLM 425
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ +C+ + A + + K G+ P+ + YNT+++G + G +E + L
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + TY+ L+ G CK ++ A+++ M+ +G +P+ T+ K G+V+
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM +Y++M+ PD +TY+ L+ LCK+ L A + EM +G D T T LI
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
C+ D A + MI+ + + + L + G + A+K+ M SV
Sbjct: 321 DGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 377
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G + L C ++ + L+ +CK GD+ A + + G
Sbjct: 109 VLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 168
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY +L+ LCKE K+D A
Sbjct: 169 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 228
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ EM +G + T T LI C+ + D A ++ M+ + L+P +T+ L
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288
Query: 365 KKRGMTALAQKLCNVMS 381
K+G A L + MS
Sbjct: 289 CKKGDLKQAHHLIDEMS 305
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +T LI + G ++ A + + M K + L+D CK+G
Sbjct: 275 LPDLITYNT---LIYGLCKKGDLKQA---HHLIDEMSM-KGLKPDKITYTTLIDGCCKEG 327
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E H+++ + ++ Y L++G + DAE+ EM + PN T
Sbjct: 328 DLDTAFE--HRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRT 385
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
Y ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 386 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 159/306 (51%), Gaps = 21/306 (6%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ ++ + IL+DSL + F++ K + V +Y ++N + R+ N+
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKA--NNVVGDVYLYTAVINAYCRAGNM 252
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+ A + E V PN TYG L++G+C++ +++ A L+ +M+ +G+ N I++NT+
Sbjct: 253 RRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 312
Query: 186 IDGLVEAGRFEE---VSGMMERFLV--------------CEPG--PTMVTYTSLVKGYCK 226
IDG G ++ + ME+ V C G P VTYT+L+ +CK
Sbjct: 313 IDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCK 372
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD+ A ++ + M +G PS TY+ ++K G++ +A ++M + G+ PD T
Sbjct: 373 DGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYT 432
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+ C K+D+A+++ +EMK RG + ++ T LI L + + + A ++DM+
Sbjct: 433 YASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDML 492
Query: 347 RRGLVP 352
+ GL+P
Sbjct: 493 KAGLIP 498
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+++++G +S V DA R +M + V+ N + Y +L++ Y R + R +++ M
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
EGIE Y ++D L A +V + + YT+++ YC+AG++
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A+K+L + G P+ TY + F K G++E A L M G +++ ++ ++
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 314
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C++ +D A+++ M+ G ++++ T L LCRM G+VP
Sbjct: 315 GYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRM----------------GVVP 358
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL 376
+Y+T+ L K G A++L
Sbjct: 359 NYVTYTTLISIHCKDGDMVEARRL 382
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 35/294 (11%)
Query: 36 FVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
+ +I Y RAG M AA E N + + +L+ CK G+++AA
Sbjct: 239 YTAVINAYCRAGNMRRAAKVLDECVGN-----GVEPNERTYGVLIKGFCKIGQMEAAEML 293
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ Q ++N +++G+ R V DA + M K V N+ TY TL G
Sbjct: 294 LADMQ--GQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGL 351
Query: 155 CRLRRVDR-------------------AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
CR+ V A RL +EM ++G P+ + Y+ +I G + GR
Sbjct: 352 CRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRI 411
Query: 196 EEVSGMMERFL--VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
E ERF + + G P + TY SLV G+C G ++ A K+ + M RG P+
Sbjct: 412 REA----ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVA 467
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
Y +K G+ E A LY M+++G PD Y L+ L +++ D+ +
Sbjct: 468 YTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 521
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 28/240 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
+IK K + ++A LL D + G V +++ F +I Y R GMV+ A
Sbjct: 277 LIKGFCKIGQMEAAEMLLAD-MQGQGVG--LNQIIFNTMIDGYCRKGMVDDALKIKAAME 333
Query: 53 -------IWTFEFAN----NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL 101
I+T+ + +V N+ + +L I CK G + A F R+
Sbjct: 334 KIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIH----CKDGDMVEARRLF--REMA 387
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
++ P+V Y+++++G+ + +++AERF EM K+ P+V TY +LV G+C +VD
Sbjct: 388 EKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVD 447
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A++L +EM++ G EPN + Y +I GL + GR E + + L P Y++LV
Sbjct: 448 VALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+ V+DGL ++GR ++ +++ + Y SL+ Y + D +IL++M +
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G + TY S + L+ +M + D Y ++ C+ +
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A +V E G + + T +LI C++ + + A DM +G+ + + F + D
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 314
Query: 363 EFKKRGMTALAQKLCNVMSSV 383
+ ++GM A K+ M +
Sbjct: 315 GYCRKGMVDDALKIKAAMEKI 335
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ LC +G + +S K ++ +APT+ YN +L+ + + K A
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEK--SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + V +V TY L+ CR R+ + L+++MRK I PN + YNT+I+G G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
S ++ L P VT+ +L+ G+ G+ + A K+ MM ++G PS +Y
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + + A Y +M +G R+TY ++ LCK LD A+ + EM G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D D+ T + LI+ C++ +F A + R GL P+ + + L
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 14/343 (4%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
ILIR Y R GM++ ++ F + F+ +L S+ K G + S +
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMG----LYGFNPSVYTCNAILGSVVKSG--EDVSVWSFL 181
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
++ L + P V +NIL+N + + + +M K P +VTY T++ YC+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPT 213
R AI L+ M+ +G++ + YN +I L + R + + M +R + P
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI----HPN 297
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VTY +L+ G+ G + AS++L M+S G P+ T+N G ++A+ ++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G TP ++Y +LL LCK + DLA MK G + T T +I LC+
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DEA +M + G+ P +T+ L + F K G A+++
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 157/328 (47%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ +G+V AS+ ++ L +P +N L++G N K+A + +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEM--LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +TP+ V+YG L++G C+ D A M++ G+ I Y +IDGL + G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ P +VTY++L+ G+CK G + A +I+ + G P+ Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G +++A+ +Y MI G+T D T+++L+ LCK K+ A + + M G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + LI+ + +A + F++M + G P + T+ L K G A+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 375 KLCNVMSSVPRSME------LLDSRCKD 396
K + +VP +++ LL + CK
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G + A+ F K + +LLD LCK A +
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMME----AKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 95 FHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + K ++ R+ Y +++G ++ + +A EM K+ + P++VTY L+ G
Sbjct: 391 YMRMK---RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C++ R A +V + + G+ PN I+Y+T+I G +E + E ++
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ LV CKAG + A + ++ M S G LP+ +++ + G+ A +++
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M + G+ P TY LLK LCK L A + K + +D L+ +C+
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+A + F +M++R ++P T+ L ++G T +A
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 667
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 163/384 (42%), Gaps = 51/384 (13%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
+A+A+EF C+ D I +P+ VS D LI Y +G A F+ +
Sbjct: 524 VAEAEEF--MRCMTSDGI----LPNTVSFDC---LINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
F + SL L LCK G ++ A E F K + TV +YN LL +S N
Sbjct: 575 HPTFFTYGSL----LKGLCKGGHLREA-EKFLKSLHAVPAAVDTV-MYNTLLTAMCKSGN 628
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYN 183
+ A + EM + ++ P+ TY +L+ G CR + AI KE G + PN ++Y
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 184 TVIDGLVEAG-----------------------------------RFEEVSGMMERFLVC 208
+DG+ +AG + E+ + ++
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
GP + TY L+ GY K D+ + + + +I G LP T + + +E
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ + + I G DR T+++L+ C +++ A + K M G +D DT ++ +
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Query: 329 LCRMYKFDEASAEFEDMIRRGLVP 352
L R ++F E+ +M ++G+ P
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISP 892
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 13/342 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVK 89
V + T+ +I + G ++ A+ +M K+ D + L++ CK GR K
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLN-----EMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E + + S P +Y+ L+ R +K+A R + M E T + T+
Sbjct: 456 TAKEIVCRIYRVGLS--PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
LV C+ +V A ++ M +GI PN + ++ +I+G +G + + +
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT TY SL+KG CK G L A K LK + + YN K G + A+
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ +M++ PD TY L+ LC++ K +AI +KE + RG L M +
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG--NVLPNKVMYTCFV 691
Query: 330 CRMYKFDEASAEF---EDMIRRGLVPHYLTFKRLNDEFKKRG 368
M+K + A E M G P +T + D + + G
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 170/393 (43%), Gaps = 12/393 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + K+ A L + + +PD T+ LI R G AI FA
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPD---SYTYTSLISGLCRKGKTVIAIL---FAK 672
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGW 119
+ N ++ +D + K G+ KA YF R+++D P + N +++G+
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI-YF--REQMDNLGHTPDIVTTNAMIDGY 729
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R ++ EM +N PN+ TY L+ GY + + V + L + + GI P+
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ ++++ G+ E+ E +++ F+ T+ L+ C G++ A ++K+
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 849
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S G T + ++ + +++ + +M + G +P+ Y L+ LC+
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 300 LDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A V +EM C ++ S M + L + K DEA+ M++ LVP +F
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAM-VRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
L K G A +L VMS+ ++L+
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P++ T +++ K+G+ LK M+ R P T+N G E + L
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+KM +SGY P +TY+ +L CK+ + AI++ MK +G D D+ T MLIH LCR
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + DM +R + P+ +T+ L + F G +A +L N M S
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 148/389 (38%), Gaps = 42/389 (10%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ LI R G ++ AI +E +++ F +L+ SLCK G+V A E+
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAM----ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R P ++ L+NG+ S A + EM K P TYG+L++G C
Sbjct: 532 --RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + A + +K + + ++YNT++ + ++G + + + P
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 216 TYTSLVKGYC------------------------------------KAGDLEGASKILKM 239
TYTSL+ G C KAG + +
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 709
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G P T N +S+ GK+E +L +M P+ TY+ILL K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ + + + + G D T L+ +C + + I RG+ TF
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSME 388
L + G A L VM+S+ S++
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLD 858
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 153/372 (41%), Gaps = 44/372 (11%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
G+ +P+ V FV +AG +A I+ E +NL + + ++ +D
Sbjct: 678 GNVLPNKVMYTCFV---DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----IDGYS 730
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G+++ ++ + +Q+ P + YNILL+G+ + K+V + + + + P+
Sbjct: 731 RMGKIEKTNDLLPEMG--NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG---------- 193
+T +LV G C ++ ++++K G+E + +N +I G
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 194 -------------------------RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
RF+E ++ P Y L+ G C+ G
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
D++ A + + MI+ P + R +K GK ++A L R M++ P ++
Sbjct: 909 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ + CK + A+++ M G +DL + +LI LC A +E+M
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 349 GLVPHYLTFKRL 360
G + + T+K L
Sbjct: 1029 GFLANATTYKAL 1040
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R R + ++ EM K+GI P + Y +I+GL G + + E + + P V
Sbjct: 871 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+++V+ K G + A+ +L+ M+ +P+ ++ K G V +A+ L M
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH-LLCRMYK 334
G D ++Y++L+ LC + + LA ++ +EMK G + T LI LL R
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETA 1050
Query: 335 FDEASAEFEDMIRRGLV 351
F A +D++ RG +
Sbjct: 1051 FSGADIILKDLLARGFI 1067
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 5/242 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWL 133
F +L+ C G + A + L S T +LN R+ +++
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN---RNHRFQESRMVLH 883
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K+ ++P Y L+ G CR+ + A + +EM I P + + ++ L + G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ +E + ++ L + PT+ ++T+L+ CK G++ A ++ +M + G +YN
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-ILCKEDKLDLAIQVSKEMKC 312
G + A LY +M G+ + TY L++ +L +E A + K++
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1063
Query: 313 RG 314
RG
Sbjct: 1064 RG 1065
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC+ G +K A + K + + P + ++ + +A M K
Sbjct: 900 LINGLCRVGDIKTA--FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--- 194
+ P + ++ TL+ C+ V A+ L M G++ + + YN +I GL G
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 195 ----FEEVSGMMERFLVCEPGPTMVTYTSLVKGY-CKAGDLEGASKILKMMISRGFLPS 248
+EE+ G + FL TY +L++G + GA ILK +++RGF+ S
Sbjct: 1018 AFELYEEMKG--DGFLA-----NATTYKALIRGLLARETAFSGADIILKDLLARGFITS 1069
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
G + +++++D LC G A E +EL + PT+ +YN ++ G R+ V DA +
Sbjct: 53 GETTYKLVVDGLCGAGMANQALELV---RELSGVYTPTLFIYNGIITGLCRASRVMDAYK 109
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+M +E++ PNV TY L+ G CR + A + +EM++ G +PN I Y T+I L
Sbjct: 110 VLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLS 169
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AG +E +M E ++T T++V G CKA L+ A K ++ M G P+
Sbjct: 170 RAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEV 229
Query: 251 TYNYFFRYFSKFGKVEDAMNLY-RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ F + G+++ + + + G + + Y L LCK LD A + +E
Sbjct: 230 TYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEE 289
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ G D+ T +MLI+ R +FD + EDM R G+ P +T+ L
Sbjct: 290 LRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTL 340
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 172/384 (44%), Gaps = 43/384 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +++ AGM A+ E L V + ++ ++ LC+ RV A +
Sbjct: 56 TYKLVVDGLCGAGMANQAL---ELVRELSGV--YTPTLFIYNGIITGLCRASRVMDAYKV 110
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K +++S P V Y ILLNG RS K A + EM++ PN +TYGTL++
Sbjct: 111 LEKM--VEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHL 168
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R +D A+R++ E R + + I T++ GL +A R ++ ME P
Sbjct: 169 SRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNE 228
Query: 215 VTYTSLVKGY------------------------------------CKAGDLEGASKILK 238
VTY++LV G+ CKAG L+ A K ++
Sbjct: 229 VTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVE 288
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ G +P TY+ F++ G+ + ++ L M +G PD +TY L+ +LCKE
Sbjct: 289 ELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKER 348
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K A ++ + M+ G ++ T ++ LC+ K DE +E M++ P +T+
Sbjct: 349 KFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYS 408
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
+ + K GM A KL ++ S
Sbjct: 409 IIMNGLSKAGMLDSAVKLFELIKS 432
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 159/359 (44%), Gaps = 57/359 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ +RAG ++ A+ +L++ + + ++ + LCK R+ A ++
Sbjct: 160 TYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTI----VGGLCKASRLDDALKF 215
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE-------------------- 134
+ +++ P Y+ L++G+ + + RF+ E
Sbjct: 216 MEEMRQM--GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDA 273
Query: 135 ----------------MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+R+ V P+VVTY L+ + R + D ++ L+++MR+ G++P+
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+T+I+ L + +F++ ++E P +VTY S++ G CK+G ++ ++ +
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MM+ P TY+ SK G ++ A+ L+ + S PD Y +++ LC+
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453
Query: 299 KLDLA--------IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
KL+ A + V+ + CR L+ LC + D A E RG
Sbjct: 454 KLEEACGMYHGMEVTVAGDNICRAL-------AGLVAALCDAERTDSARRIVEVASERG 505
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 169/355 (47%), Gaps = 17/355 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + KAK + A+ L + PD T+ LI ++ + AI F
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMVAKRICPDVF---TYNALISGFSAVSKLNYAIDLF---- 259
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +N + F IL+D CK+G+V A + D P V YN L++G+
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD--IKPDVVTYNSLMDGYC 317
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V A+ + M V NV Y T+V G+C+++ VD AI L +EMR I PN +
Sbjct: 318 SINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVV 377
Query: 181 VYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
Y+++IDGL + GR + V M +R +P P +VTY+S++ CK ++ A +
Sbjct: 378 TYSSLIDGLCKLGRIFYALKLVDEMHDR---GQP-PNIVTYSSILDALCKNHHVDKAIAL 433
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L + +G P TY + + G++EDA N++ ++ GY D Y ++++ C
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCD 493
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ D A+ + +M+ GC + T ++I L + D A +MI RGL+
Sbjct: 494 KGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ ++ A + F+K K+ ++ P V +NIL++G+ + V DA+
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKK--ENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+++ P+VVTY +L++GYC + +V++A + M G+ N +Y T+++G +
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P +VTY+SL+ G CK G + A K++ M RG P+ TY+
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K V+ A+ L + + G PD TY IL+K LC+ +L+ A V +++ +G
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
++D+ T++I C FD+A A M G +P+ T++
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYE 520
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 168/343 (48%), Gaps = 8/343 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI+ G + A+ F + + + + F + L++ LCK GR+ AA +
Sbjct: 133 TFNTLIKGLCLKGHIHQAL---HFHDKV-VAQGFHLDQVSYGTLINGLCKVGRITAALQL 188
Query: 95 FHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K +D P +YN++++ ++K V DA + +M + + P+V TY L+ G
Sbjct: 189 L---KRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISG 245
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+ + +++ AI L +M+KE I PN +N ++DG + G+ + ++ + + P
Sbjct: 246 FSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPD 305
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY SL+ GYC + A I M S G + + Y F K V++A+NL+
Sbjct: 306 VVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFE 365
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M P+ +TY L+ LCK ++ A+++ EM RG ++ T + ++ LC+ +
Sbjct: 366 EMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNH 425
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+A A ++ +G+ P T+ L + G AQ +
Sbjct: 426 HVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 156/328 (47%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ + G + F K L + + PT +N L+ G ++ A F +
Sbjct: 99 FNILINCFSQLGLNSLSFSIF--AKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDK 156
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + V+YGTL+ G C++ R+ A++L+K + + ++PNA++YN +ID + +A
Sbjct: 157 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + + P + TY +L+ G+ L A + M P+ T+N
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GKV DA + M++ PD +TY+ L+ C +K++ A + M G
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T +++ C++ DEA FE+M R ++P+ +T+ L D K G A
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYAL 396
Query: 375 KLCNVMS------SVPRSMELLDSRCKD 396
KL + M ++ +LD+ CK+
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSILDALCKN 424
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 12/307 (3%)
Query: 88 VKAASEYFHKRKE------------LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
++ S+ HK+ E L ++ P +N +L+ ++K+ A +M
Sbjct: 28 IRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQM 87
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ + T+ L+ + +L + + ++ K+G P AI +NT+I GL G
Sbjct: 88 ELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHI 147
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ ++ + V+Y +L+ G CK G + A ++LK + + P+ YN
Sbjct: 148 HQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMI 207
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
K V DA +LY +M+ PD TY+ L+ KL+ AI + +MK
Sbjct: 208 IDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENI 267
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+ ++ T +L+ C+ K ++A M++ + P +T+ L D + A+
Sbjct: 268 NPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKD 327
Query: 376 LCNVMSS 382
+ + M+S
Sbjct: 328 IFDSMAS 334
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 175/354 (49%), Gaps = 8/354 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGA-----SLFEILLDSLCKQGRVK 89
TF I ++ R G ++ A+ + ++ +G + ++D CK+G V+
Sbjct: 253 TFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQ 312
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A+ + + + + P Y L+NG+ + + A + + + + P++V Y T
Sbjct: 313 DANRVL--KDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNT 370
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++G + + A++L+ EM + G PN YN VI+GL + G + S +++ +
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + TY +L+ GYCK L+ A++++ M S+G P TYN K GK E+ M
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+++ M E G TP+ +TY+I++ LCK K++ A+ + EMK +G D+ + L
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYL-TFKRLNDEFKKRGMTALAQKLCNVMSS 382
C++ D A F M ++ V H T+ + F ++ +A KL +VM +
Sbjct: 551 CKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKN 604
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 185/442 (41%), Gaps = 83/442 (18%)
Query: 35 TFVILIRRYARAGMVEAAIWTFE-------------------------FANNLDMV---- 65
++ ++ Y R G V+ A+ TFE + N V
Sbjct: 78 AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137
Query: 66 --KNFDSGASLFEILLDSLCKQGRVKAA-----------------------------SEY 94
+ S + I + S CK R AA E+
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH 197
Query: 95 FHKRKELDQSWA----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
H R+ D+ A P V +N L++ + V ++ER ++ K V PN+ T+
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257
Query: 151 VEGYCRLRRVDRAIR---------LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
V+G CR +DRA+R +++M G EP+ + YN++IDG + G ++ + +
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
++ + P TY SL+ G+CK GD + A + K + +G PS YN + S+
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G + A+ L +M E+G P+ TY++++ LCK + A + + +GC D+ T
Sbjct: 378 QGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFT 437
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT--------ALA 373
LI C+ K D A+ M +G+ P +T+ L + K G + A+
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497
Query: 374 QKLCNVMSSVPRSMELLDSRCK 395
+K C ++ ++DS CK
Sbjct: 498 EKGCT--PNIITYNIIVDSLCK 517
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 62/409 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFA 59
+I K + D A + D +G P V +T LI+ ++ G++ A+ E A
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNT---LIKGLSQQGLILPALQLMNEMA 392
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + N + + ++++ LCK G V AS + + P + YN L++G+
Sbjct: 393 EN-GCLPNIWT----YNLVINGLCKMGCVSDASHLVDD--AIAKGCPPDIFTYNTLIDGY 445
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + A M + +TP+V+TY TL+ G C+ + + + + K M ++G PN
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I YN ++D L +A + E ++ P +V++ +L G+CK GD++GA ++ +
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565
Query: 240 MISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL-------- 290
M + + TYN FS+ + AM L+ M SG PD TY ++
Sbjct: 566 MEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMG 625
Query: 291 ---------------------------LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
L LC +DK+ A+ + M +G
Sbjct: 626 NITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKG--------- 676
Query: 324 MLIHLLCRMYKFDEASAE-----FEDMIRRGLVPHYLTFKRLNDEFKKR 367
++ + +++ D+ ED++++G + +Y T++ L D + +
Sbjct: 677 IVPETVNTIFEADKKVVAAPKILVEDLLKKGHIAYY-TYELLYDGIRDK 724
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 162 RAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV-TYTS 219
+A+ + + E G + A Y ++ L G FEE+ ++ + Y
Sbjct: 22 KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIE 81
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+K Y + G ++ A + M PS ++N +FG A +Y +M + G
Sbjct: 82 AMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRG 141
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
D TY I +K CK + A+++ + M GCD + ++ L + D A
Sbjct: 142 VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHAR 201
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M+ R L P + F +L K+G+ +++L
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERL 238
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 181/384 (47%), Gaps = 7/384 (1%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++K L AK A +LL ++ P+ VS +T L++ + E A+
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNT---LLKGFCDENRAEEALELLHMM 192
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ V++ + +++ +G+V A F DQ P V Y I+++G
Sbjct: 193 AD-GQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMT--DQGIPPNVVTYTIVIDGL 249
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++ V AE + +M + V PN+VTY L+ GY + + +R++KEM G+EP+
Sbjct: 250 CKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDC 309
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y ++D L + G+ E + + + P + Y ++ GY G L L +
Sbjct: 310 FTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDL 369
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G P+ +N F F+K + +AM+++ KM + G +P+ + Y L+ LCK +
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+D A +M G ++ T L++ LC + K+++A F +M+ +G+ P+ + F
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489
Query: 360 LNDEFKKRGMTALAQKLCNVMSSV 383
+ G AQ+L ++M V
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERV 513
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 162/333 (48%), Gaps = 6/333 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F I+ +A+ M+ A+ F + N + A+L +D+LCK GRV A F
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATL----IDALCKLGRVDDAELKF 437
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ +++ AP + V+ L+ G + A + EM + + PNVV + T++ C
Sbjct: 438 NQM--INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RV +A RL+ M + G P+ I YN +I G G+ +E S +++ L P
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L+ GYC+ G ++ A + + M+S G P TYN K + +A LY M
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I SG TY+I+L L K + +D A+++ + + + +D+ T ++I L + +
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++A F + GLVP T++ + + + G
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEG 708
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 172/347 (49%), Gaps = 10/347 (2%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAASEYF 95
I++ YA G + E + LD MV N +F I+ + K+ + A + F
Sbjct: 349 IILHGYATKGALS------EMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIF 402
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+K ++ Q +P V Y L++ + V DAE + +M E V PN+V + +LV G C
Sbjct: 403 NKMRQ--QGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + ++A L EM +GI PN + +NT++ L GR + +++ P ++
Sbjct: 461 TIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDII 520
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+Y +L++G+C G + ASK+L +M+S G P+ TYN + + G+++DA +++++M
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM 580
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ +G TP +TY+ +L L K + A ++ M G + T ++++ L +
Sbjct: 581 LSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCV 640
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
DEA F+ + + L +TF + K G A L +S+
Sbjct: 641 DEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISA 687
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 171/383 (44%), Gaps = 10/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A + I P+ V T+ LI Y G + + + +
Sbjct: 245 VIDGLCKAQVVDRAEGVFQQMIDKGVRPNIV---TYTCLIHGYLSIGQWKEVVRMLKEMS 301
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + +LLD LCK+G+ A + F + + P V +Y I+L+G+
Sbjct: 302 ----AHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM--IRKGIKPDVSIYGIILHGYA 355
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + F M ++PN + + + + + A+ + +MR++G+ PN +
Sbjct: 356 TKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVV 415
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+ID L + GR ++ + + P +V +TSLV G C E A ++ M
Sbjct: 416 NYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEM 475
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+++G P+ +N G+V A L M G PD ++Y+ L++ C K
Sbjct: 476 VNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKT 535
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR- 359
D A ++ M G + T L+H CR + D+A + F++M+ G+ P +T+
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
L+ FK R + + N+++S
Sbjct: 596 LHGLFKTRRFSEAKELYLNMITS 618
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 135/318 (42%), Gaps = 15/318 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFV---ILIRRYARAGMVEAAIWTFE 57
+I L K D A I P+ V + V I ++ +AG + FE
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGEL-----FFE 474
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
N + F ++ +LC +GRV A + + P + YN L+
Sbjct: 475 MVN-----QGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTR--PDIISYNALIR 527
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G +A + M + PN TY TL+ GYCR R+D A + +EM GI P
Sbjct: 528 GHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITP 587
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ YNT++ GL + RF E + + ++ TY ++ G K ++ A K+
Sbjct: 588 VVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMF 647
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + S+ T+N K G+ EDAMNL+ + +G PD TY ++ + L +E
Sbjct: 648 QSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEE 707
Query: 298 DKLDLAIQVSKEMKCRGC 315
L+ + EM+ GC
Sbjct: 708 GSLEEFDGMFSEMEKSGC 725
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 149/341 (43%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V+ + LI + G V+ A F N + N +F L+ LC +
Sbjct: 412 PNVVN---YATLIDALCKLGRVDDAELKFNQMINEGVAPNI----VVFTSLVYGLCTIDK 464
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E F + ++Q P V +N ++ V A+R M + P++++Y
Sbjct: 465 WEKAGELFFEM--VNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISY 522
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G+C + + D A +L+ M G++PN YNT++ G GR ++ + + L
Sbjct: 523 NALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS 582
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY +++ G K A ++ MI+ G S TYN SK V++
Sbjct: 583 NGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDE 642
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ +++ + D +T++I++ L K+ + + A+ + + G D+ T ++
Sbjct: 643 ALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAE 702
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
L +E F +M + G P+ L L RG
Sbjct: 703 NLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRG 743
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYNTVIDGLVEAGRFEEV 198
V P+V TY LV +CR+ R++ + K G + +V N ++ GL +A R E
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 199 SGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMIS---RGFLPSPTTYN 253
G++ R + E G P +V+Y +L+KG+C E A ++L MM R P+ +YN
Sbjct: 150 MGVLLRRM-SELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYN 208
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
F G+V+ A NL+ M + G P+ +TY I++ LCK +D A V ++M +
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T T LIH + ++ E ++M GL P T+ L D K+G A
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328
Query: 374 QKLCNVM 380
+KL + M
Sbjct: 329 RKLFDSM 335
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 2/257 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ C G+ AS+ L P YN LL+G+ R + DA + E
Sbjct: 522 YNALIRGHCLVGKTDEASKLLDIM--LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQE 579
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +TP VVTY T++ G + RR A L M G + + YN +++GL +
Sbjct: 580 MLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNC 639
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + ++T+ ++ K G E A + + + G +P TTY
Sbjct: 640 VDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRL 699
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G +E+ ++ +M +SG P+ L + L++ L + A ++ +
Sbjct: 700 IAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKN 759
Query: 315 CDIDLDTSTMLIHLLCR 331
++ T++MLI L R
Sbjct: 760 FSLEASTTSMLISLFSR 776
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 171/371 (46%), Gaps = 20/371 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI ++ A LL D I + PD V TF LI + + G V A +
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVV---TFSALINAFVKEGKVSGAEELYREM- 176
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +N + ++D CK R++ A F + + +P + N L++G
Sbjct: 177 ---LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLM--VSKGCSPDIITLNTLIDGCC 231
Query: 121 RSK-----------NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
R+K NV A+ + EM V+P++VT TL+ G C ++++A+ + K
Sbjct: 232 RAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKV 291
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
+K ++ + N +I+G+ + + +E + V +VTY L+ + K G+
Sbjct: 292 FQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGN 351
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A I M+ +G +PS TYN F K ++E+A + M+ G +PD +T+
Sbjct: 352 FLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFST 411
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+K CK ++D +++ EM RG D T LIH C++ + A FE+M+ G
Sbjct: 412 LIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSG 471
Query: 350 LVPHYLTFKRL 360
+ P +TF+ +
Sbjct: 472 VCPDTITFRSM 482
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 14/326 (4%)
Query: 63 DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
DM+ +N D F L+++ K+G+V A E + R+ L ++ PT Y+ +++G+ +
Sbjct: 140 DMIERNIDPDVVTFSALINAFVKEGKVSGAEELY--REMLRRNIFPTTITYSSMIDGFCK 197
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRR-----------VDRAIRLVKEM 170
++DA+ + M + +P+++T TL++G CR +R V+ A L +EM
Sbjct: 198 HSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEM 257
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ P+ + NT++ GL E G+ E+ M + F + T ++ G CK +
Sbjct: 258 ISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKV 317
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + + G TYN F K G A ++Y +M+ G P +TY+ +
Sbjct: 318 DEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSM 377
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CK+++L+ A Q+ M GC D+ T + LI C+ + D+ F +M +RGL
Sbjct: 378 VDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGL 437
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKL 376
V +T+ L F K G AQ +
Sbjct: 438 VADTITYNALIHGFCKVGDLNGAQDI 463
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 176/375 (46%), Gaps = 31/375 (8%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD-----SGASLFEIL 78
GH+ PD V+ T V GM + + + L+M++ D + ++ +
Sbjct: 40 GHQ-PDAVTYGTIV--------NGMCKLG----DTVSALNMLRKMDESQIKANVVIYSAI 86
Query: 79 LDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE 138
+D LCK G A F + E + P V YN +++G+ DAE+ +M +
Sbjct: 87 VDRLCKDGNHIKAQNIFTEMHE--KGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIER 144
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
N+ P+VVT+ L+ + + +V A L +EM + I P I Y+++IDG + R E+
Sbjct: 145 NIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDA 204
Query: 199 SGMMERFLVCEPGPTMVTYTS-----------LVKGYCKAGDLEGASKILKMMISRGFLP 247
M + + P ++T + L+ G+C+ G++ A + + MIS G P
Sbjct: 205 KHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSP 264
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
T N + GK+E A+ +++ +S D T +I++ +CK +K+D A +
Sbjct: 265 DIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLF 324
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ G + D+ T +LI + + F A + +M+ +G++P +T+ + D F K+
Sbjct: 325 NSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQ 384
Query: 368 GMTALAQKLCNVMSS 382
A+++ + M S
Sbjct: 385 NRLEEARQMVDSMVS 399
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 153/342 (44%), Gaps = 52/342 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC++GRV A + E + P Y ++NG + + A +
Sbjct: 13 FTTLMNGLCREGRVLQALALVDRMVE--EGHQPDAVTYGTIVNGMCKLGDTVSALNMLRK 70
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + NVV Y +V+ C+ +A + EM ++GI PN + YN +IDG G+
Sbjct: 71 MDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGK 130
Query: 195 FEEVS----GMMERFLVCEPG---------------------------------PTMVTY 217
+ + M+ER + +P PT +TY
Sbjct: 131 WSDAEQLLRDMIERNI--DPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITY 188
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN-----------YFFRYFSKFGKVE 266
+S++ G+CK LE A + +M+S+G P T N + F + G V
Sbjct: 189 SSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVN 248
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A +L+++MI +G +PD +T + LL LC+ KL+ A+++ K + D+D T ++I
Sbjct: 249 VAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIII 308
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ +C+ K DEA F + G+ +T+ L F K G
Sbjct: 309 NGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEG 350
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 20/295 (6%)
Query: 28 PDFVSKDTFV--------ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-FEIL 78
PD ++ +T + LI + + G V A F+ +M+ N S + L
Sbjct: 218 PDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQ-----EMISNGVSPDIVTCNTL 272
Query: 79 LDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
L LC+ G+++ A E F ++ ++D A NI++NG + V +A + +
Sbjct: 273 LAGLCENGKLEKALEMFKVFQKSKMDLDTATC----NIIINGMCKGNKVDEAWDLFNSLP 328
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
V +VVTY L+ + + RA + EM +GI P+ + YN+++DG + R E
Sbjct: 329 VNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLE 388
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E M++ + P +VT+++L+KGYCKAG ++ ++ M RG + TYN
Sbjct: 389 EARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALI 448
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
F K G + A +++ +M+ SG PD +T+ +L LC + +L + + ++++
Sbjct: 449 HGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
++ V + L+NG R V A M +E P+ VTYGT+V G C+L
Sbjct: 2 VETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDT 61
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYT 218
A+ ++++M + I+ N ++Y+ ++D L + G + + E G P ++TY
Sbjct: 62 VSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMH--EKGIFPNVLTYN 119
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ GYC G A ++L+ MI R P T++ F K GKV A LYR+M+
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT-STM----------LIH 327
P +TY ++ CK +L+ A + M +GC D+ T +T+ LIH
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C++ + A F++MI G+ P +T L
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTL 272
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + NVVT+ TL+ G CR RV +A+ LV M +EG +P+A+ Y T+++G+ + G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
M+ + + +V Y+++V CK G+ A I M +G P+ TYN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ +GK DA L R MIE PD +T+ L+ KE K+ A ++ +EM R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
T + +I C+ + ++A F+ M+ +G P +T L D
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLID 228
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%)
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M + G N + + T+++GL GR + +++R + P VTY ++V G CK GD
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A +L+ M + Y+ K G A N++ +M E G P+ LTY+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ C K A Q+ ++M R D D+ T + LI+ + K A + +M+RR
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ P +T+ + D F K A+ + ++M S
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVS 213
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ CK GRV E F + + + YN L++G+ + ++ A+ + E
Sbjct: 409 FSTLIKGYCKAGRVDDGLELFSEMCQ--RGLVADTITYNALIHGFCKVGDLNGAQDIFEE 466
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
M V P+ +T+ +++ G C + + + ++++++K
Sbjct: 467 MVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 138 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 194 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D+ T TM+I+ C+ + S ++M R G P +T+ L
Sbjct: 374 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVL 422
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 6/345 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 125 EDI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 303 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 407
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 169 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 221
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 222 MDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ Y T+IDG + G + +R +
Sbjct: 280 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 339
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWK 399
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M +G+ P +TY++L+
Sbjct: 400 GSKLLKEMQRNGHAPSVVTYNVLM 423
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 150/328 (45%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 52 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYTLTRE-HKLWVPFDTCRK---V 107
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + K K F+ ++ + ++ + L+ +C+ + A + + K G+
Sbjct: 108 LEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 167
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G +E + L P + TY+ L+ G CK ++ A++
Sbjct: 168 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ T+ K G+V+ AM +Y++M+ +PD +TY+ L+ LC
Sbjct: 228 LFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L A + EM +G D T T LI C+ D A + MI+ + +
Sbjct: 288 KKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 347
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSV 375
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 209
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 210 ------------------SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLI 277
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 274 PDLITYNT---LIYGLCKKGDLKQA---HDLIDEMSM-KGLKPDKFTYTTLIDGCCKEGD 326
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E H+++ + ++ Y L++G + DAE+ EM + P++ TY
Sbjct: 327 LDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTY 384
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++ +C+ V + +L+KEM++ G P+ + YN +++G
Sbjct: 385 TMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 179/370 (48%), Gaps = 53/370 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDLWVLMIDSYGKAGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S LF+++L ++GR A YF+K L + PT +NI++ G+F
Sbjct: 108 ELGVERTIKSYDVLFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNIMIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR---------------------- 158
S V+ A RF+ +M+ +TP+V+TY T++ GY R++
Sbjct: 162 LSGKVETANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 159 -------------RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
RVD A+RL +EM+ GI+PNAI Y+T++ GL A + E ++
Sbjct: 222 TXTTLIKGYVSVDRVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEM 281
Query: 206 LVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
+ PT + L+ G CKAG+L+ A+ +L+ MI Y + K G+
Sbjct: 282 VDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQ 341
Query: 265 VEDAMNLYRKMIE--------SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ A+NL K+IE S + + Y+ L++ LC + A + +++ G
Sbjct: 342 YDKAINLLDKLIEKDIILRPQSTLHMEXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQ 401
Query: 317 IDLDTSTMLI 326
+ +T+++
Sbjct: 402 DSIALNTLIL 411
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +T L+K D++
Sbjct: 177 KSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAP 288
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 131/292 (44%), Gaps = 19/292 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V+ T LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTT---LIKGYVSVDRVDDALRLXEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++G
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARSXL--KEMVDKYIAPTDNSIFLRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI--EP 177
++ N+ A M + +V YG L+E YC+ + D+AI L+ ++ ++ I P
Sbjct: 302 CKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIILRP 361
Query: 178 NA------IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ I YN +I+ L GR + ++ + + + + +L+ G+ + G +
Sbjct: 362 QSTLHMEXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQDS-IALNTLILGHSQEGSPD 420
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
A ++LK+M+ R + + Y+ + + K + DA MIE+G+ PD
Sbjct: 421 SAFELLKIMLRRKIDSAKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPD 472
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGSKKSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T+ +Y L K + G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M TPD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMKGF 249
Query: 349 GLVPHYLTFKRL 360
G+ P+ +T+ L
Sbjct: 250 GIKPNAITYSTL 261
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 184/423 (43%), Gaps = 81/423 (19%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKA 90
++ T+ L+ YAR G ++ A E M N F+ + +L LC+ G+V
Sbjct: 273 TRPTYNTLVSAYARLGWIKQATKVVEA-----MTANGFEPDLWTYNVLAAGLCQAGKV-- 325
Query: 91 ASEYFHKRKELDQ--SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV-------- 140
E F + E+++ + P V YN L + F+ + DA R EMR++ V
Sbjct: 326 -DEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHN 384
Query: 141 ---------------------------TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
P+V+TY TL+ +C+ + +A L+ EM +
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMER-----FLV-----------------CEPG 211
G++ + NTV+ L + R+EE G+++ F+ EP
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 212 -------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
P++ TY +L+KG + G L+ A L ++ +G +P TTYN
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ K G +E+A + KM+E+ + PD +T + L+ LC KLD A+++ + +G +D
Sbjct: 565 YCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD 624
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ T LI +C+ D A F DM RGL P T+ + + G T AQ + +
Sbjct: 625 VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLH 684
Query: 379 VMS 381
++
Sbjct: 685 KLA 687
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 7/286 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+ + C +G + A + S P YN LLN R + +A
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLS--PDAVTYNTLLNAHCRKGMLGEARALLAR 264
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+K+ V P TY TLV Y RL + +A ++V+ M G EP+ YN + GL +AG+
Sbjct: 265 MKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGK 324
Query: 195 FEE---VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+E + MER P +VTY +L K A ++L+ M +G + T
Sbjct: 325 VDEAFRLKDEMERLGTLLPD--VVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVT 382
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N + K G++E A+ KM + G PD +TY+ L+ CK + A + EM
Sbjct: 383 HNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
RG +D T +++ LC+ +++EA + +RG +P +++
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSY 488
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 45/312 (14%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
I++ LCK G ++ A +K D AP V YN L++ ++ N+ A EM
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMA--DDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442
Query: 137 KENVT-----------------------------------PNVVTYGTLVEGYCRLRRVD 161
+ + P+ V+YGT++ Y + +
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSE 502
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTY 217
A+RL EM ++ + P+ YNT+I GL GR +E ++ +ME+ LV P TY
Sbjct: 503 PALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLV----PDDTTY 558
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
++ YCK GDLE A + M+ F P T N GK++ A+ L+ +E
Sbjct: 559 NIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVE 618
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G D +TY+ L++ +CK+ +D A+ +M+ RG D T +++ L + +E
Sbjct: 619 KGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEE 678
Query: 338 ASAEFEDMIRRG 349
A + G
Sbjct: 679 AQNMLHKLAESG 690
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 17/284 (5%)
Query: 107 PTVRVYNILLNGWFRSKNVK-----DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P+++ N +L+ RS + DA R + +R + PN T+ LV +C +
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALR---LHPNHYTFNLLVHTHCSKGTLA 221
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A+ + M+ G+ P+A+ YNT+++ G E ++ R PT TY +LV
Sbjct: 222 DALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLV 281
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG-Y 280
Y + G ++ A+K+++ M + GF P TYN + GKV++A L +M G
Sbjct: 282 SAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTL 341
Query: 281 TPDRLTYHIL----LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
PD +TY+ L K C D A+++ +EM+ +G L T ++I LC+ + +
Sbjct: 342 LPDVVTYNTLADACFKCRCSSD----ALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE 397
Query: 337 EASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A M GL P +T+ L K G A A L + M
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 51/261 (19%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ LI+ +R G ++ AI N M K + + I++ + CK+G ++ A
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKL----NELMEKGLVPDDTTYNIIIHAYCKEGDLENA 574
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF---WLEMRKENVTPNVVTYG 148
++ +K E S+ P V N L+NG + + A + W+E K+ +V+TY
Sbjct: 575 FQFHNKMVE--NSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV---DVITYN 629
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
TL++ C+ VD A+ +M G++P+A YN V+ L EAGR EE M+ +
Sbjct: 630 TLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL--A 687
Query: 209 EPG------------PTMV-------------------------TYTSLVKGYCKAGDLE 231
E G P+ V YT LV G C +G +
Sbjct: 688 ESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFK 747
Query: 232 GASKILKMMISRGFLPSPTTY 252
A IL M+ +G +TY
Sbjct: 748 EAKAILDEMMQKGMSVDSSTY 768
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI+ + G V+ A+ F DM + A + ++L +L + GR + A
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFA-----DMEARGLQPDAFTYNVVLSALSEAGRTEEAQN 681
Query: 94 YFHKRKE---LDQSWA-PTVRVYNILLNGWFRSKNVKDA--ERFWLEMRKENVTPNVVTY 147
HK E L QS++ P ++ ++ +++ KDA E +E +++ + Y
Sbjct: 682 MLHKLAESGTLSQSFSSPLLKPSSV-----DEAESGKDAKTEEETVENPQDSASE---AY 733
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
LV G C + A ++ EM ++G+ ++ Y T+++GLV+
Sbjct: 734 TKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 75 FSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ L+ + ++ +NIL++ + + +++ A + + K + P+VV+Y TL+ GY
Sbjct: 131 --KEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LB A + M +D T LI LC+ +
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRX 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAXSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY L+ G CK GDL+ A+ ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A +MIE D + Y L+ LC+E + A ++ + M
Sbjct: 320 YTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 10/221 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A+E F + L + P + L++G ++ V A + +
Sbjct: 215 YSVLINGLCKEXKMDDANELFDEM--LVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQ 272
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +++ P+++TY L+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G
Sbjct: 273 MLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGN 332
Query: 195 ----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
FE M+E + + V YT+L+ G C+ G A K+L+ M+S G P
Sbjct: 333 LBTAFEHRXRMIEENIRLDD----VAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAX 388
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
TY F K G V L ++M G+ P +TY++L+
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 129 FYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G +E + P + TY+ L+ G CK ++ A+++ M+ +G +P+
Sbjct: 189 RLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXV 248
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+ L A + EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM 308
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G D T T LI C+ B A MI + + + L + G
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRX 368
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 369 VDAEKMLRXMLSV 381
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + A E H+ + ++++ Y L++G + DAE+
Sbjct: 320 YTTLIDGCCKEGNLBTAFE--HRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRX 377
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 378 MLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 163/315 (51%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKZGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK M Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKX 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + M R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKXGQYDKAVKLLD 350
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP-HYLTFKR 359
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P F R
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMR 296
Query: 360 LNDEFKKRGMTALAQKLCNVMS--SVP 384
L K G A + M SVP
Sbjct: 297 LISSHCKSGNLDAAADVLKAMXRLSVP 323
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPD 472
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 150/325 (46%), Gaps = 8/325 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C R+ A + E+ + P + L++G F +A M +
Sbjct: 85 LLNGYCHGKRISDAVALVDQMVEM--GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
PN+VTYG +V G C+ +D A L+ +M IE + +++NT+ID L + ++
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + P +VTY+SL+ C G AS++L MI + P+ T+N
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K GK +A L+ MI+ PD TY+ L+ C D+LD A Q+ + M + C
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
DLDT LI C+ + ++ + F +M RGLV +T+ L G AQK+
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 378 NVMSS--VPRSME----LLDSRCKD 396
M S VP + LLD C +
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNN 407
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G + A +K + V ++N +++ + ++V DA + E
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEA--AKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 209
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A +L+ +M ++ I PN + +N +ID V+ G+
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 269
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F E + + + P + TY SL+ G+C L+ A ++ + M+S+ P TYN
Sbjct: 270 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 329
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +VED L+R+M G D +TY L++ L + D A +V K+M G
Sbjct: 330 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
D+ T ++L+ LC K ++A F+ M
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 167/334 (50%), Gaps = 11/334 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V T+ +++ + G ++ A F N ++ K ++ +F ++DSLCK
Sbjct: 147 PNLV---TYGVVVNGLCKRGDIDLA---FNLLNKMEAAK-IEADVVIFNTIIDSLCKYRH 199
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A F KE++ + P V Y+ L++ DA + +M ++ + PN+VT
Sbjct: 200 VDDALNLF---KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + + A +L +M K I+P+ YN++I+G R ++ M E +
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + TY +L+KG+CK+ +E +++ + M RG + TY + G +
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A ++++M+ G PD +TY ILL LC KL+ A++V M+ +D+ T +I
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+C+ K D+ F + +G+ P+ +T+ +
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 470
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y +++NG + ++ A +M + +VV + T+++ C+ R VD A+ L
Sbjct: 147 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 206
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
KEM +GI PN + Y+++I L GR+ + S ++ + + P +VT+ +L+ + K
Sbjct: 207 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 266
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A K+ MI R P TYN F +++ A ++ M+ PD T
Sbjct: 267 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 326
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ ++ +EM RG D T T LI L D A F+ M+
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D G
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNG 408
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 2/260 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWL--EMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P++ +N LL+ + K L +M K P++VT +L+ GYC +R+ A+
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
LV +M + G P+ I + T+I GL + E +++R + P +VTY +V G
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK GD++ A +L M + +N K+ V+DA+NL+++M G P+
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY L+ LC + A Q+ +M + + +L T LI + KF EA +D
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279
Query: 345 MIRRGLVPHYLTFKRLNDEF 364
MI+R + P T+ L + F
Sbjct: 280 MIKRSIDPDIFTYNSLINGF 299
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 10/312 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR AS+ E + P + +N L++ + + +AE+ +
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++ P++ TY +L+ G+C R+D+A ++ + M + P+ YNT+I G ++ R
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339
Query: 195 FEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
E+ + M R LV G T VTYT+L++G GD + A K+ K M+S G P
Sbjct: 340 VEDGTELFREMSHRGLV---GDT-VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ GK+E A+ ++ M +S D Y +++ +CK K+D + +
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G ++ T +I LC EA A + M G +P T+ L + G
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515
Query: 371 ALAQKLCNVMSS 382
A + +L M S
Sbjct: 516 AASAELIREMRS 527
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 17/348 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L + A LL D I P+ V TF LI + + G VEA
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLV---TFNALIDAFVKEGKFVEAEKL----- 276
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ DM+K + D + L++ C R+ A + F + + P + YN L+ G
Sbjct: 277 -HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM--VSKDCFPDLDTYNTLIKG 333
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +SK V+D + EM + + VTY TL++G D A ++ K+M +G+ P+
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ ++DGL G+ E+ + + E + YT++++G CKAG ++ +
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ +G P+ TYN +++A L +KM E G PD TY+ L++ ++
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ ++ +EM R C D ST I L+ M F DM+
Sbjct: 514 DKAASAELIREM--RSCRFVGDAST--IGLVANMLHDGRLDKSFLDML 557
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 132/272 (48%), Gaps = 4/272 (1%)
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL--VKEMRKEGIE 176
W + + DA + M K P++ + L+ ++++ D I L + +M K G E
Sbjct: 17 WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE 76
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ + +++++G R + ++++ + P +T+T+L+ G A +
Sbjct: 77 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M+ RG P+ TY K G ++ A NL KM + D + ++ ++ LCK
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+D A+ + KEM+ +G ++ T + LI LC ++ +AS DMI + + P+ +T
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
F L D F K G A+KL + M + RS++
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDM--IKRSID 286
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 9/306 (2%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVR 110
+W F + NL+ + + F IL+ S K+G ++ A F + W P+V
Sbjct: 120 VWGF-YEENLEC--GYPASLYFFNILMHSFVKEGEIRLAQSVF----DAITKWGLRPSVV 172
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + ++ + R M+ V P+V TY L+ G C+ ++D A L EM
Sbjct: 173 SFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEM 232
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+G+ PN + + T+IDG + GR + + ++ L P ++TY +L+ G CK GDL
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++ MI +G P TY K G +E A ++MI+ D + Y L
Sbjct: 293 KQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 351 VPHYLT 356
+P +T
Sbjct: 413 MPSVVT 418
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 166/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + ++ A+ + + K + P+VV++ TL+ GY
Sbjct: 125 EEN--LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+L ++ RL M+ G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I G PD++TY L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N++ + + EG RL A + + K G+ P+ + +NT+++G ++ G E +
Sbjct: 140 NILMHSFVKEGEIRL-----AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P + TY+ L+ G CK ++ A+ + M+ +G +P+ T+ K
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITY 314
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T LI C+ + A + MI+ + + + L + G + A+K+ M S
Sbjct: 315 TTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 383 VPRSMEL 389
V E+
Sbjct: 375 VGLKPEI 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ + K G++ A + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS ++N + K G + + L M SG PD TY
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY----------------- 209
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 210 ------------------SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLI 277
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 167/381 (43%), Gaps = 37/381 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y R V +A F N +N S + ++ LC+ GR+
Sbjct: 251 TYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVS----YTTIIHGLCEAGRIDEGISL 306
Query: 95 FHKRKELD---------------------------------QSWAPTVRVYNILLNGWFR 121
F K +E D +S P V Y ++++ +
Sbjct: 307 FKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCK 366
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ + ++ R EM ++ + P+VVTY L+ GYC R++ A+ ++ M PN
Sbjct: 367 ERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERT 426
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +I G + + ++ + L + P++VTY SL+ CKAG + A K+L ++
Sbjct: 427 YNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLK 486
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G +P TY+ F K ++E+A +L+ + E G + + Y L+ CK K+D
Sbjct: 487 ENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKID 546
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI + + M C + T LI+ +C+ K E + E+M + G+ P T+ L
Sbjct: 547 EAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILI 606
Query: 362 DEFKKRGMTALAQKLCNVMSS 382
+E + G A ++ N M S
Sbjct: 607 EEMLREGDFDHANRVFNQMVS 627
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 149/307 (48%), Gaps = 2/307 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M K + L+ C++GR++AA E + + P R YN L+ G+ + K
Sbjct: 381 MEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES--NNCRPNERTYNELICGFSKRK 438
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+V A +M + +TP++VTY +L+ C+ D A +L+ +++ G+ P+ Y+
Sbjct: 439 HVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYS 498
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
ID L ++ R EE + V YT+L+ G+CKAG ++ A +L+ M S
Sbjct: 499 VFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSE 558
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
LP+ +TYN K GKV++ +++ M + G P TY IL++ + +E D A
Sbjct: 559 DCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHA 618
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+V +M G D+ T T IH C EA MI G++P LT+ L
Sbjct: 619 NRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISA 678
Query: 364 FKKRGMT 370
+++ G+
Sbjct: 679 YERLGLA 685
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 160/350 (45%), Gaps = 42/350 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF-- 58
M+ + K ++ D + +L + + VP V T+ LIR Y G +EAA+
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVV---TYNALIRGYCEEGRIEAALEILGLME 416
Query: 59 ANN--------------LDMVKNFDSGASLFEILLDS---------------LCKQGRVK 89
+NN K+ +L +L+S CK G
Sbjct: 417 SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFD 476
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+A + KE P Y++ ++ +SK +++A + ++++ + N V Y
Sbjct: 477 SAYKLLDLLKE--NGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++G+C+ ++D AI L++ M E PN+ YN++I G+ + G+ +E M+E
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT+ TYT L++ + GD + A+++ M+S G P TY F + G V++A
Sbjct: 595 VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAE 654
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDL---AIQVSKEMKCRGCD 316
+ +MIE+G PD LTY +L+ ++L L A V K M GCD
Sbjct: 655 GMMARMIEAGVMPDSLTYTLLISAY---ERLGLAYDAFNVLKRMLDAGCD 701
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
+K K A LL + P V T+ LI +AG ++A + +
Sbjct: 434 FSKRKHVHKAMTLLSKMLESKLTPSLV---TYNSLIHVQCKAGHFDSAYKLLDLLKENGL 490
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
V + + + +D+LCK R++ A + F+ KE + +Y L++G ++
Sbjct: 491 VPD----QWTYSVFIDTLCKSKRMEEACDLFNSLKE--KGIKANEVMYTALIDGHCKAGK 544
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ +A M E+ PN TY +L+ G C+ +V + +V+ M K G++P Y
Sbjct: 545 IDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTI 604
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+ ++ G F+ + + + + P + TYT+ + YC +G+++ A ++ MI G
Sbjct: 605 LIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAG 664
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
+P TY + + G DA N+ ++M+++G P ++ L+
Sbjct: 665 VMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 70/352 (19%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L+ P + N ++N + + N+ +A + ++ + ++P+ TY +L+ GYCR V
Sbjct: 206 LNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDV 265
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG------- 211
+ A ++ M +G N + Y T+I GL EAGR +E + ++ C P
Sbjct: 266 NSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVI 325
Query: 212 --------------------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
P + TYT +V CK L+ + +IL M+ +G
Sbjct: 326 IHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGL 385
Query: 246 LPSPTTYNYFFRYFSKFGKVE-----------------------------------DAMN 270
+PS TYN R + + G++E AM
Sbjct: 386 VPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L KM+ES TP +TY+ L+ + CK D A ++ +K G D T ++ I LC
Sbjct: 446 LLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLC 505
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + +EA F + +G+ + + + L D K G A L M S
Sbjct: 506 KSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS 557
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V +Y L+ R +D R+ EM + I PN NT+++ + G E + +
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P TYTSL+ GYC+ D+ A K+ MM ++G + +Y +
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G++++ ++L++KM E P TY +++ L D+ + + EM+ R C+ ++ T
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T+++ +C+ K DE+ +M+ +GLVP +T+ L + + G A ++ +M S
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I V KA FDSA+ LL L K G VPD + T+ + I ++ +E A F
Sbjct: 465 LIHVQCKAGHFDSAYKLLDLLKENG-LVPD---QWTYSVFIDTLCKSKRMEEACDLF--- 517
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N+L K + ++ L+D CK G++ A + D P YN L+ G
Sbjct: 518 NSLK-EKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSED--CLPNSSTYNSLIYGV 574
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V++ M K V P V TY L+E R D A R+ +M G +P+
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y I +G +E GMM R + P +TYT L+ Y + G A +LK
Sbjct: 635 YTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKR 694
Query: 240 MISRGFLPSPTTYNYFFRY 258
M+ G PS +N Y
Sbjct: 695 MLDAGCDPSHPIWNNLIWY 713
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 155/315 (49%), Gaps = 18/315 (5%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M K F S + ++ LC +V+ A F + K + + P V Y IL++ + ++
Sbjct: 449 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT--PDVYTYTILIDSFCKAG 506
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++ A+ + EMR +P VVTY L+ Y + ++V +A + M G PN + Y
Sbjct: 507 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 566
Query: 184 TVIDGLVEAGRFEEV------------SGMMERFLVCEP----GPTMVTYTSLVKGYCKA 227
++DGL +AG + S + + CE P +VTY +LV G CKA
Sbjct: 567 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 626
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
++ A ++L M+S G P+ Y+ F K GK++ A ++ +M + GY P TY
Sbjct: 627 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 686
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
L+ + K+ +LDLA++V +M C ++ T T +I LCR+ + ++A M
Sbjct: 687 TSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 746
Query: 348 RGLVPHYLTFKRLND 362
+G P+ +T+ L D
Sbjct: 747 KGCSPNVVTYTALID 761
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 161/340 (47%), Gaps = 25/340 (7%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L +FD A+ L+ + + VPD T+ +I A VE A F+ +
Sbjct: 430 RCLCGVGKFDKAFQLIKEMMRKGFVPD---TSTYSKVITFLCHATKVEKAFLLFQ---EM 483
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MV + IL+DS CK G ++ A F + + + S PTV Y L++ + ++
Sbjct: 484 KMV-GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS--PTVVTYTALIHAYLKA 540
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M PN VTYG LV+G C+ + +A + ++
Sbjct: 541 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 600
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ + PN + Y ++DGL +A + + +++ L P + Y +L+ G+CK
Sbjct: 601 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 660
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG ++ A ++ M G+LPS TY K G+++ AM + +M++ TP+ +T
Sbjct: 661 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 720
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
Y ++ LC+ + + A+++ M+ +GC ++ T T LI
Sbjct: 721 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 760
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 143/310 (46%), Gaps = 25/310 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + + A+ L + PD T+ ILI + +AG++E A W FE
Sbjct: 463 VITFLCHATKVEKAFLLFQEMKMVGVTPDVY---TYTILIDSFCKAGLIEQAQWLFEEMR 519
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + +L L K +V A++ FH+ +D P Y L++G
Sbjct: 520 SVGCSPTVVTYTALIHAYL----KAKQVPQANDIFHRM--VDAGCRPNDVTYGALVDGLC 573
Query: 121 RSKNVKDAERFWLEM----------------RKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
++ N+ A + ++ + + PNVVTYG LV+G C+ +VD A
Sbjct: 574 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 633
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L+ M G EPN IVY+ +IDG +AG+ + + + C P++ TYTSL+
Sbjct: 634 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 693
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
K G L+ A K+L M+ P+ TY + G+ E A+ L M E G +P+
Sbjct: 694 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 753
Query: 285 LTYHILLKIL 294
+TY L+ L
Sbjct: 754 VTYTALIDGL 763
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 45/428 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L +A FD A L +P+ V+ T + + + G + I
Sbjct: 282 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII------- 334
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----SWAPTVRVYNILL 116
N+ M + + SLF L+ S C + +Y + K L++ P VYNI +
Sbjct: 335 NMMMTEGCNPNPSLFNSLVHSYCNE------KDYAYAYKLLNRMTTCGCPPGYVVYNIFI 388
Query: 117 NGW-----FRSKNVKD-AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
S ++ D AE+ + EM N N V C + + D+A +L+KEM
Sbjct: 389 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 448
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
++G P+ Y+ VI L A + E+ + + + P + TYT L+ +CKAG +
Sbjct: 449 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 508
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A + + M S G P+ TY + K +V A +++ +M+++G P+ +TY L
Sbjct: 509 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 568
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLD----------------TSTMLIHLLCRMYK 334
+ LCK + A +V ++ D D T L+ LC+ +K
Sbjct: 569 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 628
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSME 388
D A + M+ G P+++ + L D F K G AQ++ C + SV
Sbjct: 629 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 688
Query: 389 LLDSRCKD 396
L+D KD
Sbjct: 689 LIDRMFKD 696
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 18/315 (5%)
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC G+ A + ++ + + + P Y+ ++ + V+ A + EM+ VT
Sbjct: 432 LCGVGKFDKAFQLI--KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 489
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+V TY L++ +C+ +++A L +EMR G P + Y +I ++A + + + +
Sbjct: 490 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 549
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG----------------F 245
R + P VTY +LV G CKAG++ A ++ +I
Sbjct: 550 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 609
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P+ TY K KV+ A L M+ SG P+ + Y L+ CK K+D A +
Sbjct: 610 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 669
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
V +M G + T T LI + + + D A M++ P+ +T+ + D
Sbjct: 670 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 729
Query: 366 KRGMTALAQKLCNVM 380
+ G + A KL ++M
Sbjct: 730 RIGESEKALKLLSLM 744
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 143/334 (42%), Gaps = 17/334 (5%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L +L+ C+ G A E + K D + P+ YN L+ + V R
Sbjct: 176 LLNVLVRRCCRGGMWNEALEELGRLK--DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQK 233
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + T G C+ R A+ +++ +E + + ++ +I GL+EA
Sbjct: 234 EMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEAS 290
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F+E + R P +VTY +L+ G+ K L +I+ MM++ G P+P+ +N
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 350
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK------LDLAIQVS 307
+ A L +M G P + Y+I + +C ++K LDLA ++
Sbjct: 351 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 410
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL------N 361
EM C ++ LC + KFD+A ++M+R+G VP T+ ++
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 470
Query: 362 DEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCK 395
+ +K + K+ V V L+DS CK
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 504
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 163/315 (51%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKQGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK M Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKX 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A KEM + D LI C+ D A+ + M R +
Sbjct: 265 LCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKXGQYDKAVKLLD 350
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP-HYLTFKR 359
D A+++ +EMK G + T + L+ LC K EA ++M+ + L P F R
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMR 296
Query: 360 LNDEFKKRGMTALAQKLCNVMS--SVP 384
L K G A + M SVP
Sbjct: 297 LISSHCKSGNLDAAADVLKAMXRLSVP 323
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 12/293 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENV-TPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
VYN+L SK + A +F+ + + N+ N T+ ++E R +++ A ++ +
Sbjct: 15 VYNVL----HSSKTSEHALQFFXWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLD 70
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 71 MPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGR 130
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 131 YMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNT 190
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ + K++ A + EMK R + + T T LI + + D+A E+M G
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFG 250
Query: 350 LVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 251 IKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVXL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSXYNSLVQSYLKKNEPXDAKAALDSMIENDHLPD 472
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 168/344 (48%), Gaps = 13/344 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFANNLDMVK-NFDSGASLFEILLDSLCK 84
PD V T+ LI+ G + A+ E N++ + N + I++D LCK
Sbjct: 171 TPDVV---TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCK 227
Query: 85 QGRVKAASEYFHKRKE--------LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
GR A + F + K LDQ P + +N+L++ + V +A++ M
Sbjct: 228 VGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 287
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ + P++VTY +L+EG+C + ++ A L M +G EP+ I YN +I+G + + E
Sbjct: 288 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVE 347
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + L+ P ++TY SL+KG AG ++ A K+ +M + G + TY F
Sbjct: 348 EAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 407
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K + +AM L+ ++ S + + + L+ LCK KL+ A ++ +++ G +
Sbjct: 408 DGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHE 467
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ T T++IH CR + D+A+ + M G P +T+ L
Sbjct: 468 PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 511
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 18/336 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
ILL+ LC R++ F L + ++P + YN L+ G + +A R +L
Sbjct: 107 LNILLNCLCNVNRLREGFAAF--AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE------GIEPNAIVYNTVIDG 188
M+K TP+VVTYGTL++G C ++ A++L +EM + +PN I YN ++DG
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 189 LVEAGR-------FEEV--SGMMERFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASKILK 238
L + GR FEE+ GM+ ++ + P MVT+ L+ CK G + A K+L
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+MI G +P TYN F G + A L+ M G PD ++Y++L+ K
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K++ A+++ EM G ++ T L+ + K D+A F M G+ + T+
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
D K A KL + S +E+ + C
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 440
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 159/355 (44%), Gaps = 8/355 (2%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN--FDSGAS-- 73
+L+ I +E+ + T+ I++ + G + A FE M+ N D G
Sbjct: 200 MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPD 259
Query: 74 --LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
F +L+D+LCK+G+V A + ++ P + YN L+ G+ ++ A
Sbjct: 260 MVTFNVLIDTLCKEGKVIEAKKLLGVM--IESGIVPDLVTYNSLIEGFCMVGDLNSAREL 317
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
++ M + P+V++Y L+ GY + +V+ A++L EM G PN I Y++++ G+
Sbjct: 318 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 377
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
AG+ ++ + TY + G CK L A K+ + S F
Sbjct: 378 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 437
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
N K GK+E A L+ K+ G+ P+ +TY I++ C+E ++D A + ++M+
Sbjct: 438 LNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 497
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
GC D+ T L+ K +E M ++ + P +T + D K
Sbjct: 498 ANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 142/316 (44%), Gaps = 20/316 (6%)
Query: 83 CKQGRVKA--ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
CK G V A A +FH + + P++ +N LL+G + K+ + +MR +
Sbjct: 43 CKTGNVTATHALHFFHLM--MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL 100
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
+ + T L+ C + R+ + + G PN + YNT+I GL R E +
Sbjct: 101 SSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR 160
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM---ISRGFL---PSPTTYNY 254
+ R P +VTY +L+KG C G++ A K+ + M ISR + P+ TYN
Sbjct: 161 LFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNI 220
Query: 255 FFRYFSKFGKVEDAMNLY----------RKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
K G+ ++A L+ +M++ G PD +T+++L+ LCKE K+ A
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 280
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ M G DL T LI C + + A F M +G P +++ L + +
Sbjct: 281 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 340
Query: 365 KKRGMTALAQKLCNVM 380
K A KL N M
Sbjct: 341 SKTLKVEEAMKLYNEM 356
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 10/262 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD +S + +LI Y++ VE A+ + N + +V + + ++ LL + G+
Sbjct: 328 PDVIS---YNVLINGYSKTLKVEEAMKLY---NEMLLVGKRPNVIT-YDSLLKGIFLAGK 380
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + F K A Y I L+G ++ + +A + + E++ N +
Sbjct: 381 VDDAKKLFSVMKA--HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 438
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++G C+ +++ A L +++ EG EPN + Y +I G G+ ++ + ++++
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +L++G+ ++ LE ++L M + P T + SK K ++
Sbjct: 499 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 558
Query: 268 AMNLYRKM-IESGYTPDRLTYH 288
++L + I+ G L H
Sbjct: 559 CLHLLPRFPIQKGVDKHLLMTH 580
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 127 FFNILMHRFCKDGDIRIAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 182
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN++ + T+IDG +
Sbjct: 183 KSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCK 242
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 243 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 302
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E A ++ +EM
Sbjct: 303 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREML 362
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 363 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 411
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 58 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 113
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 114 --EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 231
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CK+ LD A + K M +D T LI LCR
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXS 351
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 352 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 397
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 158 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 210
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 211 IDDANELFDEM--LVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 268
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G + +R +
Sbjct: 269 NTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQ 328
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 329 ENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 388
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 389 GSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 167/373 (44%), Gaps = 15/373 (4%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRR-YARAGMVEAAIWTFEFANNLDMVKNFDSGA 72
++C ++ + H++ V++ R+ A V AAI+ + D+
Sbjct: 4 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLY------- 56
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNILLNGWFRSKNVKDAER 130
+F L+ + + G ++ A E + +E + W P T R +L + K K
Sbjct: 57 -VFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRK---VLEHLMKLKYFKLVWG 111
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G +E + L P + TY+ L+ G CK ++ A+++ M+ +G +P+
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 231
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G D T T LI C+ D A + MI+ + + L + G +
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXS 351
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 352 VDAEKMLREMLSV 364
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 155
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 198
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 199 ------------------SVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 240
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLI 266
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD ++ +T LI + G ++ A + + M K + L+D CK G
Sbjct: 263 PDLITYNT---LIYGLCKKGDLKQA---HHLIDEMSM-KGLKPDKITYTTLIDGCCKDGD 315
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E H+++ + ++ VY L++G R DAE+ EM + P+ TY
Sbjct: 316 LDTAFE--HRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTY 373
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 374 TMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 163/315 (51%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD +RLV+EM+ GI+PNAI Y+T++ GL A + E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKA 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+D + L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGXLIENFCKAGQYDKAVKLLD 350
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D +++ +EMK G + T + L+ LC K EA ++M+ + L P
Sbjct: 237 DDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+ E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ + E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDXLRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + Y + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVBSEKSAYISLVQSXLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 156/310 (50%), Gaps = 2/310 (0%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M + F+ ++ L+D C G ++ A + F +R +++ +P VR Y L++G+ +S+
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVF-ERMDVN-GCSPNVRTYTELISGFCKSR 261
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ A + M + PNVVTY L++G C ++D A RL++ M G+ PN +
Sbjct: 262 KLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCS 321
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+ID L + R E ++ + + YTSL+ G CKAG A ++++ ++S+
Sbjct: 322 VLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
GF+P TY+ + ++ +AM + M+E G P +TY I++ L +E D +
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS 441
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ +M G D+ T T+ + C + ++A M+ G+ P+ +T+ L
Sbjct: 442 KKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICG 501
Query: 364 FKKRGMTALA 373
+ G+T+ A
Sbjct: 502 YANLGLTSQA 511
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 9/339 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + +FV+ Y RAG++ A F V+ A + LL LC G
Sbjct: 105 PDSHAYTSFVV---GYCRAGLLAHACRLFVLMPLRGCVRT----AFTYTALLHGLCGAGM 157
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ A F + AP VY +++G + ++AE + E PNVV Y
Sbjct: 158 VREAMSVFAGMQA--DGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++GYC + ++ A+ + + M G PN Y +I G ++ + + + R +
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTYT+L++G C G L+ A ++L+ M + G +P+ T + K +V +
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L +I+ G + + Y L+ LCK + A ++ + + +G D T + LI
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLID 395
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
LCR + EA +DM+ +G+ P +T+ + DE +
Sbjct: 396 GLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVR 434
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+++ C G + A+ H L +AP Y + G+ R+ + A R ++
Sbjct: 75 YTTLINAYCLAGDLPASKR--HLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVL 132
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M TY L+ G C V A+ + M+ +G P+ VY T++ GL AGR
Sbjct: 133 MPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ + P +V Y +L+ GYC GDLE A + + M G P+ TY
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K K++ AM L+ +M+++G P+ +TY L++ C + +LD A ++ + M+ G
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T ++LI LC+ + EA +I++G+ + + + L D K G A A
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372
Query: 375 KLCNVMSS---VPRSM---ELLDSRCK 395
+L + S VP + L+D C+
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCR 399
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 176/427 (41%), Gaps = 60/427 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K+++ D A L + VP+ V T+ LI+ G ++ A +
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVV---TYTALIQGQCSDGQLDCAYRLLQSME 309
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N +V N + + +L+D+LCK RV A + + VY L++G
Sbjct: 310 NSGLVPNEWTCS----VLIDALCKHERVGEAQLLLGSL--IQKGIKVNEIVYTSLIDGLC 363
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ A+R + + P+ TY +L++G CR + + A+ ++ +M ++G++P+ +
Sbjct: 364 KAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPV 423
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +ID LV + ++++ + P + TYT V+ YC G +E A ++ M
Sbjct: 424 TYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHM 483
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI------- 293
+ G P+ TYN ++ G A + ++ M+ +G P+ +Y +LL++
Sbjct: 484 VDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS 543
Query: 294 --------------------------------------------LCKEDKLDLAIQVSKE 309
LC+ D+LD A + E
Sbjct: 544 NNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIE 603
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M+ D T +I CR+ EA + M++ G +P +++ + + G
Sbjct: 604 MQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGS 663
Query: 370 TALAQKL 376
A+++
Sbjct: 664 IQTAKQV 670
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 127/327 (38%), Gaps = 27/327 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA F +A L+ + VPD T+ LI R + A+ +
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPD---AHTYSSLIDGLCRQKELSEAMLVLD--- 411
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ K + I++D L ++ + + K + P V Y I + +
Sbjct: 412 --DMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKM--IAAGIKPDVFTYTIFVRSY 467
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++DAE L M V PN+VTY L+ GY L +A K M G +PN
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527
Query: 180 IVYNTVIDGLVEA----------------GRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
Y ++ L++ + + G++E + + + Y +
Sbjct: 528 ESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTS 587
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
C+ L+ A +L M S PS Y + + +A+ M++SGY P
Sbjct: 588 LCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQ 647
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEM 310
+Y ++ LC+E + A QV +M
Sbjct: 648 LESYRHIISSLCEEGSIQTAKQVFGDM 674
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%)
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
ME F P + TYT+L+ YC AGDL + + L ++ GF P Y F + +
Sbjct: 60 MESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCR 119
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G + A L+ M G TY LL LC + A+ V M+ GC D
Sbjct: 120 AGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHV 179
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
++H LC + EA D + G P+ + + L D + G LA
Sbjct: 180 YATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELA 231
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 21/266 (7%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++L + P+ V T+ LI YA G+ A TF+ N +S L
Sbjct: 479 MMLHMVDHGVCPNLV---TYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535
Query: 77 ILLDSLCKQGRVKAAS---------EYFHKR-KELDQSWAPT-VRVYNILLNGWFRSKNV 125
+L+ + A S +Y H +E+ + P+ + +YN L R +
Sbjct: 536 LLIKKE-SSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRL 594
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A+ +EM+ N+TP+ Y +++ CRL+ + A+ V M K G P Y +
Sbjct: 595 DEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHI 654
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I L E G + + L E + + L+ G + G + S +L +M + +
Sbjct: 655 ISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNY 714
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNL 271
PS Y GK+ DA ++
Sbjct: 715 RPSDALYARL------TGKITDANDI 734
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 171/369 (46%), Gaps = 9/369 (2%)
Query: 26 EVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
++P F S LIR + R G+V+ A T N + M + + +++ LCK
Sbjct: 161 QIPHFPSCTN---LIRGFIRKGLVDEACKTL---NKMVMSGGVPDTIT-YNMVIGGLCKN 213
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR+++A + +P YN ++ F N A FW + ++ P ++
Sbjct: 214 GRLRSALDLVEDMSL--SGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLI 271
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+E C+ RA+ ++++M EG P+ + YN++++ + G++E+ + ++
Sbjct: 272 TYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNL 331
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L P VTY +L+ G + ILK+M P+ TYN K G +
Sbjct: 332 LSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLL 391
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ A++ Y M+ +PD +TY+ LL LCKE +D IQ+ + C L T ++
Sbjct: 392 DRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIV 451
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
I L R+ + A +++M+ +G++P +T L F + A +L MS +
Sbjct: 452 IDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQ 511
Query: 386 SMELLDSRC 394
++ RC
Sbjct: 512 RIKNTAYRC 520
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 128/302 (42%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ +CK A E + P + YN L+N + +D L
Sbjct: 273 YTVLIELVCKYCGAARALEVLEDMAM--EGCYPDIVTYNSLVNLTSKQGKYEDTALVILN 330
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + PN VTY TL+ D ++K M + P + YN +++GL ++G
Sbjct: 331 LLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGL 390
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + P ++TY +L+ G CK G ++ ++L +++ P TYN
Sbjct: 391 LDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNI 450
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G +E A LY +M++ G PD +T+ L C+ D+L+ A ++ KEM +
Sbjct: 451 VIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKE 510
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
I +I LCR K D A + M++ P + L GM A
Sbjct: 511 QRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEAN 570
Query: 375 KL 376
L
Sbjct: 571 DL 572
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 6/257 (2%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+T +++ C ++ A RL+ M ++ P+ +I G + G +E + +
Sbjct: 131 MTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNK 190
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
++ P +TY ++ G CK G L A +++ M G P TYN R G
Sbjct: 191 MVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGN 250
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
A+N +R + G P +TY +L++++CK A++V ++M GC D+ T
Sbjct: 251 FNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNS 310
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ---KLCNVMS 381
L++L + K+++ + +++ G+ P+ +T+ L G K+ N S
Sbjct: 311 LVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETS 370
Query: 382 SVPRSME---LLDSRCK 395
S P + LL+ CK
Sbjct: 371 SPPTHVTYNILLNGLCK 387
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 114/319 (35%), Gaps = 70/319 (21%)
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A R M +++ P+ + L+ G+ R VD A + + +M G P+ I YN VI
Sbjct: 149 AARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIG 208
Query: 188 GLVEAGRFEEVSGMMERFLV--CEPG---------------------------------P 212
GL + GR ++E + C P P
Sbjct: 209 GLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPP 268
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM--- 269
++TYT L++ CK A ++L+ M G P TYN SK GK ED
Sbjct: 269 YLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVI 328
Query: 270 ----------------NLYRKMIESGY----------------TPDRLTYHILLKILCKE 297
L +I GY P +TY+ILL LCK
Sbjct: 329 LNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKS 388
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LD AI M C D+ T L+ LC+ DE ++ P +T+
Sbjct: 389 GLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTY 448
Query: 358 KRLNDEFKKRGMTALAQKL 376
+ D + G A++L
Sbjct: 449 NIVIDGLARLGSMESAKEL 467
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ +C RV + + + + PT+ YN ++NG+ ++ + A + +
Sbjct: 509 YNVLINGICMVDRVCEVDGML--KSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQ 566
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR++ + PN++TY + ++GYCR D A++++ ++R+ G++P+ + YN +I+G + G
Sbjct: 567 MREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN 626
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ L P V Y SL+ GY ++ SK + MI G + +TY
Sbjct: 627 MSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTT 686
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
FSK G V A+ LY +M+ GY PD T+ L LC+ +D A ++ +EM+
Sbjct: 687 LIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLD 746
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++ MLI+ R K EA ++M+ G+ P T+ L
Sbjct: 747 VRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDIL 792
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
C+ +++ A F + K+ P++ YN LL G+ + + +A + + EM E P
Sbjct: 412 CQAHKLREALNLFDRMKK--AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKP 469
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
NVVTY TL+ GY + D A L+ EM++ G+ N YN +I+G+ R EV GM+
Sbjct: 470 NVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGML 529
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ F+ PTM+TY S++ G+ KAG + A + + M +G P+ TY F + +
Sbjct: 530 KSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRT 589
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G + A+ + + G PD + Y+ L+ C+E + A+Q+ + G L +
Sbjct: 590 GCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG----LAPN 645
Query: 323 TMLIHLLCRMYK----FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
T++ + L YK E S +E MI+ G+V T+ L D F K G A A +L +
Sbjct: 646 TVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYS 705
Query: 379 VM 380
M
Sbjct: 706 EM 707
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 165/361 (45%), Gaps = 10/361 (2%)
Query: 9 KEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNF 68
+E +A L + + VP +K + +LIR + GM + A +E +
Sbjct: 311 QEVGNALNLFKETLKDGIVP---TKVMYGVLIRGCDQVGMTQKA---YELCRQMTGQGLL 364
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
S L ++L L R K A F +E+ S P V YN L++ ++ +++A
Sbjct: 365 PSTFEL-SLVLKGLLNDRRWKDAVCLF---EEMADSGLPDVFTYNNLIHWHCQAHKLREA 420
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
+ M+K V P++ TY +L+ GYC+ +D A++L EM EG +PN + Y T++ G
Sbjct: 421 LNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRG 480
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
+ F+ +++ TY L+ G C + +LK +S GF+P+
Sbjct: 481 YIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPT 540
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
TYN F K G + A +Y++M E G P+ +TY + C+ D+A+++
Sbjct: 541 MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLN 600
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+++ RG D+ LI+ C+ A +++ GL P+ + + L +K
Sbjct: 601 DVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLN 660
Query: 369 M 369
M
Sbjct: 661 M 661
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 14/262 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I + +AGM+ +A ++ + N + + +D C+ G A +
Sbjct: 543 TYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT----YTSFIDGYCRTGCSDMALKM 598
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P + YN L+NG+ + N+ A + + + K+ + PN V Y +L+ GY
Sbjct: 599 LNDVRR--RGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVSGMMERFLVCEP 210
L + + + M K GI + Y T+IDG + G E S MM + +
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYI--- 713
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P T+T+L G C++GD++GA K+L+ M P+ YN + + K+++A
Sbjct: 714 -PDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772
Query: 271 LYRKMIESGYTPDRLTYHILLK 292
L+ +M+ G PD TY IL+
Sbjct: 773 LHDEMLNMGIQPDDTTYDILVS 794
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 151/322 (46%), Gaps = 17/322 (5%)
Query: 9 KEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYA---RAGMVEAAIWTFEFANNLDM 64
K+FD+A+ LL + K G D+ T+ +LI R V+ + +F M
Sbjct: 485 KDFDNAYALLDEMKQNGVSCNDY----TYNVLINGICMVDRVCEVDGMLKSF-------M 533
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ F + +++ K G + +A + + +E + P + Y ++G+ R+
Sbjct: 534 SEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMRE--KGLPPNIITYTSFIDGYCRTGC 591
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
A + ++R+ + P++V Y L+ G+C+ + A++L+ + K+G+ PN +VYN+
Sbjct: 592 SDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNS 651
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G +EVS E + TYT+L+ G+ K G++ A ++ M+++G
Sbjct: 652 LITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKG 711
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
++P T+ + G ++ A L +M P+ Y++L+ ++ KL A
Sbjct: 712 YIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAF 771
Query: 305 QVSKEMKCRGCDIDLDTSTMLI 326
++ EM G D T +L+
Sbjct: 772 RLHDEMLNMGIQPDDTTYDILV 793
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 161/372 (43%), Gaps = 40/372 (10%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F L+ + GM E A+ F+ ++ D ++ + + +LCK G A
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAEI----DPDQRVYALAITALCKLGDGGRALRML 250
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ KE+ + Y +++ ++ +++A R EMR +V+ TL+ GYC
Sbjct: 251 REMKEV--GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYC 308
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE------------------- 196
+ V A+ L KE K+GI P ++Y +I G + G +
Sbjct: 309 LRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTF 368
Query: 197 EVSGMMERFL--------VC------EPG-PTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
E+S +++ L VC + G P + TY +L+ +C+A L A + M
Sbjct: 369 ELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMK 428
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G PS TYN + K G +++A+ LY +M G+ P+ +TY L++ + D
Sbjct: 429 KAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFD 488
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + EMK G + T +LI+ +C + + E + + G +P +T+ +
Sbjct: 489 NAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSII 548
Query: 362 DEFKKRGMTALA 373
+ F K GM A
Sbjct: 549 NGFVKAGMMGSA 560
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 3/301 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ C + V A F ++ L PT +Y +L+ G + + A +M
Sbjct: 303 LMRGYCLRQEVGNALNLF--KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTG 360
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + P+ +++G RR A+ L +EM G+ P+ YN +I +A + E
Sbjct: 361 QGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLRE 419
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ +R P++ TY SL+ GYCK G ++ A K+ M GF P+ TY R
Sbjct: 420 ALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMR 479
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ ++A L +M ++G + + TY++L+ +C D++ + K G
Sbjct: 480 GYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIP 539
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
+ T +I+ + A ++ M +GL P+ +T+ D + + G + +A K+
Sbjct: 540 TMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKML 599
Query: 378 N 378
N
Sbjct: 600 N 600
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 38/265 (14%)
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + M V P++ + L+ R A+ L EMR G +A +++ ++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
++ G E+ + + E P Y + CK GD + L+M+
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGD---GGRALRML------- 250
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
R+M E G+ TY ++ +L K +++ A++V+
Sbjct: 251 -------------------------REMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVN 285
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
EM+ G +D+ +T L+ C + A F++ ++ G+VP + + L +
Sbjct: 286 DEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQV 345
Query: 368 GMTALAQKLCNVMSS---VPRSMEL 389
GMT A +LC M+ +P + EL
Sbjct: 346 GMTQKAYELCRQMTGQGLLPSTFEL 370
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 64/160 (40%)
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A+ M++RG +P + ++ +DA+ L+ +M GY D + L
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ KE + A+++ EM D D + I LC++ A +M G
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
T++ + D K G A ++ + M + M+++
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVI 298
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 199/417 (47%), Gaps = 48/417 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+ K+L + ++ + W L D I P K TF +I + R G + +
Sbjct: 27 LFKLLLRVGDYGNVWKLFKDVIRRGPQP---CKYTFSGIILGFCRKGCIHLG------ES 77
Query: 61 NLDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L ++ F + A + I++++ C +GR A +F+ +++ PTV +N ++N
Sbjct: 78 LLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM--IERGCNPTVVTFNTVINA 135
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + NV +A + + +++ +PN + Y TL+ GY ++R +D+A L +EMRK+GI P+
Sbjct: 136 FCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPD 195
Query: 179 AIVYNTVIDGLVEAGRFEE-----------------------VSGM---------MERFL 206
I +N ++ G + GR E+ VSG+ ME +
Sbjct: 196 GITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLM 255
Query: 207 -VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ E G P+++ + S++ Y +AG + A + K+M+ G PSP+T + S G
Sbjct: 256 DMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSING 315
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++++A L +MIE G + + + + +LL K + A + EM+ RG D+ +
Sbjct: 316 RLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFS 375
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I L + +EA F +M+R+GL+P+ + L F K G A KL VM
Sbjct: 376 AFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVM 432
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 168/390 (43%), Gaps = 72/390 (18%)
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NL + + + F ++++ CK+G V A + F KE+ ++P +YN L+NG+
Sbjct: 115 NLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEM--GFSPNAIMYNTLMNGYV 172
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY-------------------------- 154
+ + + A + EMRK+ + P+ +T+ LV G+
Sbjct: 173 KMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRS 232
Query: 155 ---------CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID------------------ 187
C R+D A+ + +M ++G+ P+ I +N+VI
Sbjct: 233 LFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 292
Query: 188 -----------------GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
GL GR +E + ++ + + + +T L+ + K GD+
Sbjct: 293 VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDV 352
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
GA + M RG P ++ F SK G VE+A N++ +M+ G P+ Y+ L
Sbjct: 353 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 412
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CK KL+ A+++ K M+ RG D+ T+ M+I LC+ + A F DM + GL
Sbjct: 413 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 472
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P +T+ L + + K A L N M
Sbjct: 473 SPDIITYNTLINGYCKAFDMVNADNLVNRM 502
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 37/314 (11%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNI------------------ 114
SLF+I + LC GR+ A E+ L++ +P++ +N
Sbjct: 232 SLFDISVSGLCWAGRLDEAMEFLMDM--LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY 289
Query: 115 -----------------LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
LL G + +++A +M ++ ++ N + + L++ + +
Sbjct: 290 KLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKR 349
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
V A L EM + GI P+ + ++ IDGL + G EE + L P Y
Sbjct: 350 GDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAY 409
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
SL+ G+CK G L A K+ K+M RG LP T N K G++ A+N++ M +
Sbjct: 410 NSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQ 469
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G +PD +TY+ L+ CK + A + M G + DL T + IH C + +
Sbjct: 470 TGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNR 529
Query: 338 ASAEFEDMIRRGLV 351
A ++++ G++
Sbjct: 530 AVLMLDELVSAGIL 543
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%)
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+A+ ++ MR+ G+ P+A + L+ G + V + + + P P T++ ++
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+C+ G + +L +M P+ YN G+ DA+ + MIE G
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P +T++ ++ CKE + A ++ +K G + L++ +M + D+A+
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+E+M ++G+ P +TF L K G
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYG 210
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%)
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A +IL M G PS + F+ + G + L++ +I G P + T+ ++
Sbjct: 5 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C++ + L + M C+ + ++I+ C + +A A F MI RG P
Sbjct: 65 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL 376
+TF + + F K G A+KL
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKL 148
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 182/412 (44%), Gaps = 43/412 (10%)
Query: 1 MIKVLAKAKEFDSAWCLL-LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF--- 56
MIK L ++ D LL L K+ G ++D FVI+I Y RAG+ E A+ TF
Sbjct: 79 MIKRLGYERDIDGIQYLLQLMKLEGISC----NEDLFVIVINAYRRAGLAEQALKTFYRI 134
Query: 57 -EFA------------------NNLDMVKNFDS-----GASL----FEILLDSLCKQGRV 88
EF N M+ + G L + +LL +LCK RV
Sbjct: 135 GEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRV 194
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
AA + + + P Y +++ R V++A L MR ++ P Y
Sbjct: 195 DAARKLLAEMSY--KGCIPDAVSYTTVVSSMCRLGKVEEARE--LSMRIKSFVP---VYN 247
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ G+CR +++ L EM EGI+P+ I Y+TVI+ L E G E ++ + +
Sbjct: 248 ALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLR 307
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + T+TSL+KGY G L A + MI G P+ YN +GK+ +A
Sbjct: 308 GCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEA 367
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+++ +KM +G P+ TY L+ K L A ++ +M GC ++ T ++ +
Sbjct: 368 VSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDV 427
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LCR F+ A E+M P+ +TF G T A K+ N M
Sbjct: 428 LCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM 479
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 175/458 (38%), Gaps = 104/458 (22%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
++K L K D+A LL + +PD VS + ++ R G VE A
Sbjct: 184 LLKALCKNDRVDAARKLLAEMSYKGCIPDAVS---YTTVVSSMCRLGKVEEARELSMRIK 240
Query: 53 ----IWT---------------FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
++ FE N + V+ D + ++++L + G V+ A
Sbjct: 241 SFVPVYNALINGFCREHKMEEVFELFNEM-AVEGIDPDVITYSTVINTLSEMGNVEMALA 299
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K + +P V + L+ G+F + +A W M +E PN V Y TL+ G
Sbjct: 300 VLAKM--FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG 357
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV--CEPG 211
C ++ A+ + ++M + G+ PN Y+T+IDG +AG S + + + C P
Sbjct: 358 LCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 417
Query: 212 ---------------------------------PTMVTYTSLVKGYCKAGDLEGASKILK 238
P +T+ + +KG C +G E A K+L
Sbjct: 418 VVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 477
Query: 239 MMISRGFLPSPT-----------------------------------TYNYFFRYFSKFG 263
M G P+ T TYN F G
Sbjct: 478 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 537
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-DLDTS 322
+ A+ + K++ G PD +TY+ ++ CK+ ++ AIQ+ + +G D+ T
Sbjct: 538 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTY 597
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
T L+ +C DEA + MI G+ P+ T+ L
Sbjct: 598 TSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNAL 635
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V+ +T + + Y + MVEA + + N + + L+D K G
Sbjct: 346 PNTVAYNTLIHGLCSYGK--MVEAVSVSQKMERN-----GVFPNETTYSTLIDGFAKAGD 398
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ ASE ++K + P V VY +++ R+ A M N PN +T+
Sbjct: 399 LVGASEIWNKM--ITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITF 456
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
T ++G C + + A++++ +MR+ G PN YN V+DGL A R E ++
Sbjct: 457 NTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEE 516
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
E +VTY +++ G+C AG +GA +I ++ G P TYN + K G+V+
Sbjct: 517 MEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKT 576
Query: 268 AMNLYR------------------------------------KMIESGYTPDRLTYHILL 291
A+ L KMI G P+R T++ L+
Sbjct: 577 AIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALV 636
Query: 292 KIL 294
+ L
Sbjct: 637 RGL 639
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Query: 48 MVEAAIWTFEFANNLDMVKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELD 102
MV+ F + L +++N +G F + LC G+ + A + ++ ++
Sbjct: 424 MVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQY- 482
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
AP V YN +L+G F +K ++A + E+ + + N+VTY T++ G+C
Sbjct: 483 -GCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKG 541
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-PTMVTYTSLV 221
A+++ ++ G +P++I YNTVI + G + +++R G P + TYTSL+
Sbjct: 542 ALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLL 601
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR-YFSKFGKV 265
G C ++ A L MI+ G P+ T+N R FSK G +
Sbjct: 602 WGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHL 646
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 5/267 (1%)
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+F K S+ T Y ++ +++ + M+ E ++ N + ++
Sbjct: 58 HFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINA 117
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y R ++A++ + + G +P+ +YN V+D L+ +F+ ++G+
Sbjct: 118 YRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELN 177
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TY L+K CK ++ A K+L M +G +P +Y + GKVE+A L
Sbjct: 178 VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 237
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
++ + P Y+ L+ C+E K++ ++ EM G D D+ T + +I+ L M
Sbjct: 238 RI--KSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A A M RG P+ TF L
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSL 319
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
T +TYT+++K D++G +L++M G + + + + G E A+ +
Sbjct: 72 TPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTF 131
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++ E G P Y+ +L L E+K + + MK G ++++ T ML+ LC+
Sbjct: 132 YRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKN 191
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC-NVMSSVPRSMELLD 391
+ D A +M +G +P +++ + + G A++L + S VP L++
Sbjct: 192 DRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALIN 251
Query: 392 SRCKD 396
C++
Sbjct: 252 GFCRE 256
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 --KEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ +L +M
Sbjct: 249 IFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K+M +D T LI LC+ +
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN +++ T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 NVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 131/268 (48%), Gaps = 17/268 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P ++ L++G ++ V A + +M +++ P+++TY
Sbjct: 228 MDDANELFDEM--LVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG----RFEEVSGMME 203
TL+ G C+ + + L+ EM +G++P+ I Y T+IDG + G FE M++
Sbjct: 286 NTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQ 345
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ + V YT+L+ G C+ G A K+L+ M++ G P TY F K G
Sbjct: 346 ENIRLDE----VAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKG 401
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILL 291
V L ++M G+ P +TY++L+
Sbjct: 402 DVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 58 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRK---V 113
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + K K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 114 LEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G +E + L P + TY+ L+ G CK ++ A++
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 233
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ + K G+V+ AM +Y++M+ PD +TY+ L+ LC
Sbjct: 234 LFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC 293
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L + EM +G D T T LI C+ D A + MI+ + +
Sbjct: 294 KKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEV 353
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M +V
Sbjct: 354 AYTALISGLCQEGRSVDAEKMLREMLNV 381
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + A E H+++ + ++ Y L++G + DAE+ E
Sbjct: 320 YTTLIDGCCKEGDLDTAFE--HRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 378 MLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 160/311 (51%), Gaps = 41/311 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVLMIDSYGKAGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK----------------------R 98
L + + S +LF++++ ++GR A YF+K
Sbjct: 108 ELGVERTIKSYDALFKVIM----RRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 99 KELDQSW-----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++D + +P V YN ++NG +R K + +AE++++EM+ +N+ P VVTY
Sbjct: 164 GKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++GY + +V A+RLV+EM+ GI+PNAI Y+T++ GL AG+ E +++ +
Sbjct: 224 TTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVD 283
Query: 208 CEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + L+ C+AG+L+ A+ +LK MI Y F K G+ +
Sbjct: 284 KYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHD 343
Query: 267 DAMNLYRKMIE 277
A+ L K+IE
Sbjct: 344 RAVKLLDKLIE 354
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + ++ V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ + E E P +VTY +++ G + ++ A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M + P+ TY + + +V DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM-LIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC K+ A + KEM + ++ M LI C D A+ + MIR +
Sbjct: 265 LCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKAGQHDRAVKLLD 350
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 23/294 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ D A ++ G + P V T+ LI+ Y V A+ E
Sbjct: 191 MINGCYRVKKMDEAEKYFVEMKGKNIEPTVV---TYTTLIKGYVSVDQVHDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC G++ A ++ +D+ AP ++ L++
Sbjct: 248 GYGIKPN----AITYSTLLPGLCNAGKMSEAQSIL--KEMVDKYIAPKDNSIFMRLISSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+ N+ A M + +V YG L+E +C+ + DRA++L+ ++ ++ I
Sbjct: 302 CEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
EP+A YN +I+ L G+ + ++ + L T T L++GY + G
Sbjct: 362 QSTLHMEPSA--YNPMIEYLCSNGQTAKAEALVRQLLKLGVQDTTALNT-LIRGYAQEGS 418
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD
Sbjct: 419 PDSAFELLKIMLRRKVDSEKSAYDALVQSYLKKNEPADAKAALDSMIENDHLPD 472
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GRF + L PT T+ ++ G+ +G ++ A + + M
Sbjct: 117 SYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + K+++A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 HDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAP 288
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R + T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HAAKTSEHALQFFRWVE-RSNLFEHDRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GK++ AM + M +PD +TY+
Sbjct: 130 RFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K+D A + EMK + + + T T LI + + +A E+M
Sbjct: 190 TMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRS----MELLDSRCK 395
G+ P+ +T+ L G + AQ + M P+ M L+ S+C+
Sbjct: 250 GIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCE 303
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFV---SKDTFVILIRRYARAGMVEAAIWTFE 57
+I++L +A + + A C+LLD +P +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLD------IPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L + + S +LF+++L ++GR A YF+K L + PT +N+++
Sbjct: 105 KMEELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNVMIW 158
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+F S V+ A RF+ +M+ ++P+VVTY T++ GY R+++++ A + EM+ IEP
Sbjct: 159 GFFLSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEP 218
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y T+I G V + ++ ++E P +TY++L+ G C A + A IL
Sbjct: 219 TVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSIL 278
Query: 238 KMMISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
K M+ + +PT + F R S G ++ A ++ + MI + Y +L++
Sbjct: 279 KEMMDKYL--APTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENF 336
Query: 295 CKEDKLDLAIQ-----VSKEMKCR-GCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMI 346
CK + D A++ + K++ R + L+ S +I LC + +A A ++
Sbjct: 337 CKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLL 396
Query: 347 RRGL 350
+ G+
Sbjct: 397 KLGV 400
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 110/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L++ K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAP 288
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 132/293 (45%), Gaps = 14/293 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
++ K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRC 394
G+ P+ +T+ L N E + L + + ++ S M L+ S+C
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQC 302
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 22/261 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ Y V+ A+ E + N A + LL LC ++ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPN----AITYSTLLPGLCNAEKMTEARSI 277
Query: 95 FHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ +D+ APT ++ L++ S N+ A M + +V YG L+E
Sbjct: 278 L--KEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIEN 335
Query: 154 YCRLRRVDRAIRLVKEMRKEGI----------EPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+C+ + D+A++L+ ++ ++ I EP+A YN +I+ L G+ + ++
Sbjct: 336 FCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSA--YNPMIEYLCNNGQAAKAEALVR 393
Query: 204 RFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ L + PT + +L++G+ + G + A ++LK+M+ R + Y+ + + K
Sbjct: 394 QLLKLGVQDPTALN--TLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKK 451
Query: 263 GKVEDAMNLYRKMIESGYTPD 283
+ DA MIE+ + PD
Sbjct: 452 NEPADAKAALDSMIENDHLPD 472
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 13/384 (3%)
Query: 1 MIKVLAKAKEFDSAWCL---LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+++ K DSA + +L+ G +V F LI Y +G + A+ F
Sbjct: 35 LIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYV----FSGLITAYLESGFLHDALECFR 90
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FD+ + E + K K+ ++ ++ L+ + ++ +NIL++
Sbjct: 91 LTREHKFWVPFDTCRKVLEHFM----KLKYFKSVWGFY--KEILECGYPASLYFFNILMH 144
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + ++ A+ + E+ K + P+VV++ TL+ GY RL +D RL M GI+P
Sbjct: 145 RFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQP 204
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ Y+ +I+GL + + + + + + + P VT+T+L+ G+CK G ++ A +
Sbjct: 205 DVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAY 264
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M+ +GF P TYN K G ++ A +L +M G PD++TY L+ CKE
Sbjct: 265 KEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A + K M +D T LI LCR + A +M+ GL P T+
Sbjct: 325 GDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTY 384
Query: 358 KRLNDEFKKRGMTALAQKLCNVMS 381
+ +EF K+G + KL M
Sbjct: 385 TMIINEFCKKGDVKMGSKLLKEMQ 408
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 135/285 (47%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + + W P+V +N L+NG+ R ++ + R
Sbjct: 138 FFNILMHRFCKEGEMRLAQSVFDEITK----WGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + P+V TY L+ G C+ +++ A L EM G+ PN + + T+IDG +
Sbjct: 194 KSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 254 TGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ S ++M R G VP +T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL+ R+ + G + A F+ + + S F L++ + G + E F
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVS----FNTLMNGYIRLGDL---DEGF 191
Query: 96 HKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + S P V Y++L+NG + + DA + EM + PN VT+ TL++G+
Sbjct: 192 RLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGH 251
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +D A+ KEM ++G P+ I YNT+I GL + G ++ +++ + P
Sbjct: 252 CKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDK 311
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYT+L+ G CK GDLE A K K MI Y + G+ A + R+
Sbjct: 312 ITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLRE 371
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
M+ G PD TY +++ CK+ + + ++ KEM+ G
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDG 411
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 169/373 (45%), Gaps = 15/373 (4%)
Query: 14 AWCLLLDKIGGHE-VPDFVSKDTFVILIRRYAR--AGMVEAAIWTFEFANNLDMVKNFDS 70
++C ++ + H+ +P+ +K+ I++ R + A V AI + A D+
Sbjct: 15 SYCTMIHFLCTHQMLPE--AKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVY----- 67
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+F L+ + + G + A E F +E + W P +L + + + K K
Sbjct: 68 ---VFSGLITAYLESGFLHDALECFRLTRE-HKFWVPFDTCRKVLEH-FMKLKYFKSVWG 122
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L+ +C+ + A + E+ K G+ P+ + +NT+++G +
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYI 182
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G +E + P + TY+ L+ G CK + A+++ MI G +P+
Sbjct: 183 RLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGV 242
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K G ++ AM Y++M+ G++PD +TY+ L+ LCKE L A + EM
Sbjct: 243 TFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEM 302
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G D T T LI C+ + A + MI+ + + + L + G +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQS 362
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 363 VGAEKMLREMLSV 375
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 151/311 (48%), Gaps = 2/311 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K+F + I++ SLC +G++ A + ++ L + PTV Y IL+ V
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL--LSDNCQPTVITYTILIEATMLEGGV 244
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + EM + P++ TY T++ G C+ VDRA +V+ + +G EP+ I YN +
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ L+ G++EE +M + + P +VTY+ L+ C+ G +E A +LK+M +G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P +Y+ F + G+++ A+ MI G PD + Y+ +L LCK K D A++
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ ++ GC + + + L A +M+ G+ P +T+ +
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 366 KRGMTALAQKL 376
+ GM A +L
Sbjct: 485 REGMVDEAFEL 495
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ + P V + L+ G+F +N+ A R +E+ ++ P+V Y L+ G+C++ R+D
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDVFAYNALINGFCKMNRIDD 176
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A R++ MR + P+ + YN +I L G+ + ++ + L PT++TYT L++
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G ++ A K++ M+SRG P TYN R K G V+ A + R + G P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D ++Y+ILL+ L + K + ++ +M CD ++ T ++LI LCR K +EA
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ M +GL P ++ L F + G +A + M S
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L++ P V YN L+NG+ + + DA R MR ++ +P+ VTY ++ C ++
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A++++ ++ + +P I Y +I+ + G +E +M+ L P M TY ++
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
++G CK G ++ A ++++ + +G P +YN R GK E+ L KM
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ +TY IL+ LC++ K++ A+ + K MK +G D + LI CR + D A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E MI G +P + + + K G
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 173/380 (45%), Gaps = 13/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L + D A +L + + P + T+ ILI G V+ A+ +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVI---TYTILIEATMLEGGVDEALKLMDEM- 254
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + ++ +CK+G V A E + EL + P V YNILL
Sbjct: 255 ---LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV-RNLEL-KGCEPDVISYNILLRALL 309
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ E+ +M E PNVVTY L+ CR +++ A+ L+K M+++G+ P+A
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I GR + +E + P +V Y +++ CK G + A +I +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ ++YN F G A+++ +M+ +G PD +TY+ ++ LC+E +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL--CRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ +M R C+ T I LL C+ ++ ++A E M+ G P+ T+
Sbjct: 490 DEAFELLVDM--RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 359 RLNDEFKKRGMTALAQKLCN 378
L + G A A +L N
Sbjct: 548 VLIEGIGFAGYRAEAMELAN 567
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS N ++ M ++ P+V+ L++G+ LR + +A+R+++ + K G +P+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I+G + R ++ + +++R + P VTY ++ C G L+ A K+L +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+S P+ TY G V++A+ L +M+ G PD TY+ +++ +CKE +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ + ++ +GC+ D+ + +L+ L K++E M P+ +T+ L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+ G A L +M
Sbjct: 340 ITTLCRDGKIEEAMNLLKLM 359
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI R G +E A+ + K A ++ L+ + C++GR+ A E+
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKE----KGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P + YN +L ++ A + ++ + +PN +Y T+
Sbjct: 391 LETM--ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RA+ ++ EM GI+P+ I YN++I L G +E ++ CE P++
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY ++ G+CKA +E A +L+ M+ G P+ TTY G +AM L
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 568
Query: 275 MI 276
++
Sbjct: 569 LV 570
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G ++++L M+ GY PD + L+K + A++V + ++ G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ LI+ C+M + D+A+ + M + P +T+ + RG LA
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 375 KLCNVMSS 382
K+ N + S
Sbjct: 214 KVLNQLLS 221
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI Y + + A FE ++N S + L+ C+ G++ A E
Sbjct: 227 TYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVS----YTNLIHGFCEVGKIDEALEL 282
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + KE P V Y +L+ + +A +F+ EM + + PNV TY L++ +
Sbjct: 283 FFQMKE--DGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYF 340
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ ++D + ++ M ++G+ + + +N +IDG + G E+ +++ + + P
Sbjct: 341 CKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNS 400
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY L+ G+C+ ++ A +L M P+ TYN K V+ A L+
Sbjct: 401 RTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHL 460
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
MI+ G+ PD+ T+ + LCK K++ A QV + +K + + + T LI C+ K
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F +A F+ M+ G P+ +TF L D +K G A L +VM
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 162/388 (41%), Gaps = 39/388 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ DSAW L I VPD + TF I + G VE A FE
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPD---QRTFCAFIDCLCKMGKVEQAHQVFESLK 497
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K+ ++ L+ L+D CK + A F ++ L + P +N+LL+G
Sbjct: 498 E----KHAEANEFLYTALIDGYCKAEKFSDAHLLF--KRMLFEGCFPNSITFNVLLDGLR 551
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ V+DA M K + P V TY L+E R DRA + +M G +PN +
Sbjct: 552 KEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVV 611
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKILK 238
Y I GR E M+ + + E G + Y LV Y G L+ A +L
Sbjct: 612 TYTAFIKAYCRQGRLLEAEEMVVK--IKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLI 669
Query: 239 MMISRGFLPSPTTYNYFFRY--FSKFGK-------------VEDA-----------MNLY 272
M G PS TY+ ++ F K+ K V++A L+
Sbjct: 670 RMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLF 729
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
KM+E G P+ TY L+K LCK + L LA ++ MK G + L+ C++
Sbjct: 730 EKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKL 789
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+EA + M+ + H ++K L
Sbjct: 790 GMHEEALRLLDSMMEYNHLAHLESYKLL 817
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 177/406 (43%), Gaps = 35/406 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K D A LL P+ V+ +T LI +A +V++A W +
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNT---LIHGLCKARVVDSA-WRL---H 458
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L + F F +D LCK G+V+ A + F KE + +Y L++G+
Sbjct: 459 HLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKE--KHAEANEFLYTALIDGYC 516
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+++ DA + M E PN +T+ L++G + +V+ A+ LV M K +P
Sbjct: 517 KAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH 576
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I+ ++ F+ + +++ + P +VTYT+ +K YC+ G L A +++ +
Sbjct: 577 TYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKI 636
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED-- 298
G L Y+ + G+++ A + +M ++G P R TY ILLK L E
Sbjct: 637 KEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYN 696
Query: 299 ----KLDL-AIQVS-------------------KEMKCRGCDIDLDTSTMLIHLLCRMYK 334
LDL + +S ++M +GC +++T + LI LC++
Sbjct: 697 KEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A F M G+ P L K GM A +L + M
Sbjct: 757 LSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSM 802
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 8/321 (2%)
Query: 44 ARAGMVEAAIWTFE--FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL 101
R M+++ + + E F NL F + + L L + G + + F + L
Sbjct: 125 VRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLF--KDML 182
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ P + +N ++N + NV A+ ++ + K + TY +L+ GYC++ +
Sbjct: 183 NDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELG 242
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTS 219
A ++ + M +EG N + Y +I G E G+ +E + F + E G P + TYT
Sbjct: 243 DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF--FQMKEDGCFPDVPTYTV 300
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
LV +C+ G A K + M+ G P+ TY YF K GK+++ M + M+E G
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ ++ L+ CK ++ AI V MK + T LI CR D A
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAM 420
Query: 340 AEFEDMIRRGLVPHYLTFKRL 360
A M L P+ +T+ L
Sbjct: 421 ALLNKMYENKLSPNLVTYNTL 441
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 156/353 (44%), Gaps = 34/353 (9%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK V +A H + + P R + ++ + V+ A + +
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLM--IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+++++ N Y L++GYC+ + A L K M EG PN+I +N ++DGL + G+
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ +++ + PT+ TYT L++ + D + A+ L MIS G P+ TY
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + + + G++ +A + K+ E G D Y +L+ +LD A V M G
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675
Query: 315 CDIDLDTSTMLI-HLLCRMYK-------------------------FDEASAEFEDMIRR 348
C+ T ++L+ HL+ Y F+ + FE M+ +
Sbjct: 676 CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQ 735
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM--SSVPRS----MELLDSRCK 395
G VP+ T+ +L K +LA +L N M S + S LL S CK
Sbjct: 736 GCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCK 788
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 136/324 (41%), Gaps = 58/324 (17%)
Query: 95 FHKRKELDQSWAPTVRVYNILL-----NGWFRS-KNVKDA----------ERFWLEMRKE 138
F K + TV Y LL NG+ R+ +NV+++ RF L +
Sbjct: 89 FFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTH 148
Query: 139 N-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + +V +Y L R +D L K+M +G+EPN
Sbjct: 149 HEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPN------------------- 189
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
++++ ++V +CK G++ A ++ GF TY
Sbjct: 190 ----------------LISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLIL 233
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K ++ DA ++ M + G + ++Y L+ C+ K+D A+++ +MK GC
Sbjct: 234 GYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFP 293
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK-----RGMTAL 372
D+ T T+L+ C + K EA FE+M+ G+ P+ T+ L D F K GM L
Sbjct: 294 DVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEML 353
Query: 373 AQKL-CNVMSSVPRSMELLDSRCK 395
+ L ++SSV L+D CK
Sbjct: 354 STMLEKGLVSSVVPFNALIDGYCK 377
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 72/352 (20%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I+ + + +FD A L I P+ V T+ I+ Y R G ++EA +
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVV---TYTAFIKAYCRQGRLLEAEEMVVKIK 637
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
++ +F ++++L+++ G++ +A + D P+ + Y+ILL
Sbjct: 638 EEGILLDSF-----IYDVLVNAYGCIGQLDSAFGVL--IRMFDTGCEPSRQTYSILLKHL 690
Query: 120 -------------FRSKNVK-DAERFWL------------EMRKENVTPNVVTYGTLVEG 153
S N+ D W +M ++ PNV TY L++G
Sbjct: 691 IFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKG 750
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C++ + A RL M++ GI P+ ++N+++ + G EE +++ +
Sbjct: 751 LCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAH 810
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ +Y LV G + G+ E A +I +R
Sbjct: 811 LESYKLLVCGLFEQGNQEKAEEI-----------------------------------FR 835
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
++ GY D + + +LL L ++ +D Q+ M+ GC + DT TML
Sbjct: 836 SLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 11/352 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K A+ L + I PD V TF LI + G ++ A F
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVV---TFNSLILGFCVVGQLKEAFGLFH--- 258
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+MV KN + F IL+D+LCK G + A + Q P V Y+ L++G+
Sbjct: 259 --EMVLKNINPDVYTFSILVDALCKDGNITRAKNML--AVMMKQGVIPDVVTYSSLMDGY 314
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
V A+ + M + V P+ +Y ++ G +++ VD A+ L KEM +GI P+
Sbjct: 315 CLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT 374
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN++IDGL + GR +++ ++TY SL+ CK ++ A ++K
Sbjct: 375 VTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKK 434
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G PS TYN K G++++A ++++ ++ GY+ + TY+I++ LCKE
Sbjct: 435 IKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL 494
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
+ A + +M+ G D T +I L R + ++A +MI RGL+
Sbjct: 495 FNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ C G++K A FH+ + ++ P V ++IL++ + N+ A+
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEM--VLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+ V P+VVTY +L++GYC + V++A + M + G+ P+A YN +I+GL +
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + P VTY SL+ G CK G + A +++ M + G TYN
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K ++ A+ L +K+ + G P TY+IL+ LCK +L A V +++ +G
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T ++I+ LC+ F+EA M G++P +T++ + ++ A+
Sbjct: 475 YSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAE 534
Query: 375 KL 376
KL
Sbjct: 535 KL 536
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 160/344 (46%), Gaps = 39/344 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGWFRSKNVKDAERFWL 133
+ L++ LCK G +AA + K+++ T V +YNI++N + K V DA + +
Sbjct: 167 YRTLINGLCKIGETRAALQML---KKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYS 223
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + ++P+VVT+ +L+ G+C + ++ A L EM + I P+ ++ ++D L + G
Sbjct: 224 EMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDG 283
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
M+ + P +VTY+SL+ GYC ++ A + M G P +YN
Sbjct: 284 NITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYN 343
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDR----------------------------- 284
K V++A++L+++M G PD
Sbjct: 344 IMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNN 403
Query: 285 ------LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
LTY+ L+ +LCK +D AI + K++K +G + T +LI LC+ + A
Sbjct: 404 GIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNA 463
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
F+D++ +G + T+ + + K G+ A+ L + M +
Sbjct: 464 QDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMEN 507
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 169/373 (45%), Gaps = 24/373 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
TF IL+ Y G + TF F+ ++K + F L++ +C G++K A
Sbjct: 96 TFNILVNCYCHLGEM-----TFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL- 149
Query: 94 YFHKRK-----ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
+FH LDQ Y L+NG + + A + ++ + V +VV Y
Sbjct: 150 HFHDHVIALGFHLDQVS------YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYN 203
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
++ C+ + V A +L EM + I P+ + +N++I G G+ +E G+ ++
Sbjct: 204 IIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK 263
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P + T++ LV CK G++ A +L +M+ +G +P TY+ + +V A
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKA 323
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+++ M G P +Y+I++ L K +D A+ + KEM C+G D T LI
Sbjct: 324 KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDG 383
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG----MTALAQKLCN--VMSS 382
LC++ + A ++M G+ LT+ L D K AL +K+ + + S
Sbjct: 384 LCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443
Query: 383 VPRSMELLDSRCK 395
+ L+D CK
Sbjct: 444 MYTYNILIDGLCK 456
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 2/261 (0%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKE--NVTPNVVTYGTLVEGYCRLRRVDRA 163
P++ +N +L ++ N L + E +TP +VT+ LV YC L + A
Sbjct: 54 TPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFA 113
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ ++ K G P I +NT+I+G+ G+ +E + + V+Y +L+ G
Sbjct: 114 FSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING 173
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
CK G+ A ++LK + + YN K V DA LY +MI +PD
Sbjct: 174 LCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPD 233
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+T++ L+ C +L A + EM + + D+ T ++L+ LC+ A
Sbjct: 234 VVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLA 293
Query: 344 DMIRRGLVPHYLTFKRLNDEF 364
M+++G++P +T+ L D +
Sbjct: 294 VMMKQGVIPDVVTYSSLMDGY 314
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 2/242 (0%)
Query: 141 TPNVVTYGTLVEGYCRLR--RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
TP++V + ++ + AI L ++ +GI P + +N +++ G
Sbjct: 54 TPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFA 113
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ + L PT +T+ +L+ G C G L+ A +I+ GF +Y
Sbjct: 114 FSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING 173
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K G+ A+ + +K+ D + Y+I++ LCK+ + A Q+ EM + D
Sbjct: 174 LCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPD 233
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ T LI C + + EA F +M+ + + P TF L D K G A+ +
Sbjct: 234 VVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLA 293
Query: 379 VM 380
VM
Sbjct: 294 VM 295
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F+ + W P+V +N L+NG+ R ++ + R
Sbjct: 138 FFNILMHKFCKDGDIRVAQSVFNAITK----WGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 194 KTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G C+ GDL+ A ++ M +G P T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MI+ D + Y L+ LC+E + A +V +EM
Sbjct: 314 YTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ S ++M R G +P +T
Sbjct: 374 SVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV++ TL+ GY
Sbjct: 125 EEI--LECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 183 RLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN + G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE L+ A + K M +D T LI LC+ ++
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRY 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P +T+ + +EF K+G KL M
Sbjct: 363 LDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQ 408
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 4/297 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ +C+ G + A E + E S P +NIL++G R+K V
Sbjct: 218 FNVVIKGVCRMGNFQKALELVERMTEFGCS--PDTITHNILVDGLCRAKQVNKGHEVLRR 275
Query: 135 MRKENVT-PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++++ V PN VTY +++ GYC+ +++ A+ + +M + G PN + YN +I+G +A
Sbjct: 276 LQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKAL 335
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E M + ++ P +VT++SL+ GYC+ G L+ A +I K M P+ T++
Sbjct: 336 DMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFS 395
Query: 254 YFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
K + +A+++ R++ + + P Y+ ++ ILCK K+D A + +MK
Sbjct: 396 IIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKE 455
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
+GC D T T+LI C + EA F M+ G P +T K GM
Sbjct: 456 KGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGM 512
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 157/346 (45%), Gaps = 46/346 (13%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S+ +++ +I R+G A+ F+ +D + A F + S G + AA
Sbjct: 107 SEQSYIHVIAFLCRSGRHRDALKLFD--QMMDQ-SGYLPEAGFFSFVAGSCTNAGLLDAA 163
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV-TPNVVTYGTL 150
S K L P YN LLN +DA + ++ + +P+V ++ +
Sbjct: 164 STLLTKGSRLGCCIEP--YAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVV 221
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA---GRFEEVSGMMERFLV 207
++G CR+ +A+ LV+ M + G P+ I +N ++DGL A + EV ++R V
Sbjct: 222 IKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGV 281
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
C P VTYTS++ GYC K GK+ED
Sbjct: 282 CMP--NAVTYTSVISGYC-----------------------------------KAGKMED 304
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AM++Y M+ESG P+ +TY++L+ K ++ A+++ +++ R C D+ T + LI
Sbjct: 305 AMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLID 364
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
CR + D+A +++M + P+ TF + K+ +A A
Sbjct: 365 GYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEA 410
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA--IWTFEF 58
+I KA + +SA + I H PD V TF LI Y R G ++ A IW E
Sbjct: 327 LINGYGKALDMESAVRMYRQLILRHCPPDVV---TFSSLIDGYCRCGQLDDAKRIWK-EM 382
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + F I++ SLCKQ R A + + + AP +YN +++
Sbjct: 383 G-----LHHIQPNVYTFSIIIHSLCKQNRSAEALDIL-RELNMRTDIAPQTFIYNPVIDI 436
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ V +A +M+++ P+ TY L+ G+C R+ AI L +M + G P+
Sbjct: 437 LCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPD 496
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMM 202
I N+ + +++AG EV +M
Sbjct: 497 NITVNSFVSCVLKAGMPNEVDQIM 520
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 54/266 (20%)
Query: 24 GHEVPDFVSKD--------TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL- 74
GHEV + +D T+ +I Y +AG +E A+ + DM+++ ++
Sbjct: 269 GHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYN-----DMLESGTRPNTVT 323
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ K +++A + R+ + + P V ++ L++G+ R + DA+R W E
Sbjct: 324 YNVLINGYGKALDMESAVRMY--RQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKE 381
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRR----------------------------------- 159
M ++ PNV T+ ++ C+ R
Sbjct: 382 MGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGG 441
Query: 160 -VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
VD A +V +M+++G P+ Y +I G GR E + + + P +T
Sbjct: 442 KVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVN 501
Query: 219 SLVKGYCKAGDLEGASKILKMMISRG 244
S V KAG +I M+I+ G
Sbjct: 502 SFVSCVLKAGMPNEVDQI--MLIASG 525
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 143/275 (52%), Gaps = 2/275 (0%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR--LRRVDRAIR 165
TV+V+N ++ + RS DA + MR +++ P++V++ TL+ + A+
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALE 279
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ E+R+ G+ P+AI YNT+I + ++ + E + E P + TY ++V +
Sbjct: 280 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ G + A + K ++ +GF P TYN F+K G VE + +++++G+ D +
Sbjct: 340 RCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGI 399
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ ++ + K +LDLA+ + EM+ GC D T T+L+ L +M + EA E+M
Sbjct: 400 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 459
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
GL P +TF L + K G A++ + M
Sbjct: 460 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 183/424 (43%), Gaps = 36/424 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVI---------------LIRRYA 44
M+ V A++ FD A LL D + ++ PD VS +T + L+
Sbjct: 227 MMGVYARSGRFDDARQLL-DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVR 285
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCK------------QGRVKAAS 92
+AG+ AI + N D ++FE ++ S C+ GR A
Sbjct: 286 QAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQ 345
Query: 93 EYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E KEL ++ + P YN LL + + +V+ ER E+ K + +TY T++
Sbjct: 346 EAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMI 405
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
Y ++ R+D A+ L EMR G P+A+ Y ++D L + R E ++E
Sbjct: 406 HMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLK 465
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+VT+++L+ Y K+G + A + M+ G P Y F++ + M L
Sbjct: 466 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVL 525
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
YR MI+ GY PD Y +LL L K ++ D V ++M+ L S++LI C
Sbjct: 526 YRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC- 584
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN-VMSSVPRSMELL 390
+ ++ + +G P + + D ++K G L + VP S L+
Sbjct: 585 ---ISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLI 641
Query: 391 DSRC 394
S C
Sbjct: 642 -SEC 644
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 15/363 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I Y + G ++ A+ ++ + + A + +L+DSL K R+ A +
Sbjct: 400 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPD----AVTYTVLVDSLGKMDRISEAGKV 455
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ D PT+ ++ L+ + +S DAER + M + V P+ + Y +++ +
Sbjct: 456 LEEMA--DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVF 513
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF-LVCEPGPT 213
R + + L + M K+G +P+ +Y ++ L + +E+ G+++ V E P
Sbjct: 514 ARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPL 573
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+++ + L+K C + +GAS +LK +G+ P + + K GK E ++L
Sbjct: 574 VIS-SILIKAECIS---QGAS-LLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE 628
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQ--VSKEMKCRGC-DIDLDTSTMLIHLLC 330
+ + L + +LCK K+ AIQ K+M RG D D LI L
Sbjct: 629 WIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLE 688
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
F EA F DM G+VP F + + G A +L + + S+ +L
Sbjct: 689 EAELFPEACQVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLMDDAARSDISLNIL 748
Query: 391 DSR 393
R
Sbjct: 749 SCR 751
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 117/280 (41%), Gaps = 6/280 (2%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++L++ K G V + ++ K + P + +Y I+++ +K +D E EM
Sbjct: 857 LMLEAFAKAGDVFEVMKIYNGMKA--AGYLPNMHLYRIMISLLCHNKRFRDVELMVAEME 914
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
P++V TL+ Y DR I + + + G+EP+ YNT+I ++ + F
Sbjct: 915 GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI--VMYSRNFR 972
Query: 197 EVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
G + + + G P + +Y L+ KA E A + + M ++G+ + + Y+
Sbjct: 973 PEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHM 1032
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + A +L M E G P T HIL+ D A +V +K
Sbjct: 1033 MMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSN 1092
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+I + ++ R + + +M R G+ P +
Sbjct: 1093 LEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDH 1132
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 4/293 (1%)
Query: 94 YFHKRKELD----QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
Y H R D + PTV N ++ + + E++ ++ + T
Sbjct: 798 YEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLL 857
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++E + + V +++ M+ G PN +Y +I L RF +V M+
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 917
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +V +L+ Y G+ + ++ ++ G P TYN +S+ + E+
Sbjct: 918 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 977
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +M + G TP +Y ILL K + A + +EM+ +G ++ M++ +
Sbjct: 978 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 1037
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+A M G+ P T L + G A+K+ N + S
Sbjct: 1038 RNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKS 1090
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++E Y +L+ +A VK +++E G++ ++N +I E+G +E + + +
Sbjct: 753 AMIEAYGKLKLWQQAENFVKGLKQESGVDRR--IWNALIHAYAESGLYEHARAIFDIMIK 810
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P PT+ + +++ G L+ +++ + S +T F+K G V +
Sbjct: 811 KGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFE 870
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-DLAIQVSKEMKCRGCDIDLDTSTMLI 326
M +Y M +GY P+ Y I++ +LC + D+ + V+ EM+ G DL L+
Sbjct: 871 VMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVA-EMEGAGFKPDLVVLNTLL 929
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ FD + ++ GL P T+ L
Sbjct: 930 LMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 963
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 121/303 (39%), Gaps = 10/303 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
V + + LI YA +G+ E A F+ + +S ++ +L GR+
Sbjct: 780 VDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVES----VNGMMRALIVDGRLDE 835
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ ++LD + + + ++L + ++ +V + + + M+ PN+ Y +
Sbjct: 836 LYVVVQELQDLDIKISKSTVL--LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIM 893
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ C +R +V EM G +P+ +V NT++ G F+ + L
Sbjct: 894 ISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGL 953
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TY +L+ Y + E +L M RG P +Y K E A
Sbjct: 954 EPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADL 1013
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L+ +M GY +R YH+++KI A + MK G + + T +H+L
Sbjct: 1014 LFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIAT----MHILM 1069
Query: 331 RMY 333
Y
Sbjct: 1070 TSY 1072
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 1/246 (0%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
++ + + K + AE F +++E+ + + L+ Y + A + M K+G
Sbjct: 754 MIEAYGKLKLWQQAENFVKGLKQESGVDRRI-WNALIHAYAESGLYEHARAIFDIMIKKG 812
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
P N ++ L+ GR +E+ +++ + + T +++ + KAGD+
Sbjct: 813 PLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVM 872
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
KI M + G+LP+ Y + D + +M +G+ PD + + LL +
Sbjct: 873 KIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMY 932
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
D I+V + G + D DT LI + R ++ +E +M +RGL P
Sbjct: 933 TGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKL 992
Query: 355 LTFKRL 360
++K L
Sbjct: 993 ESYKIL 998
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 115/308 (37%), Gaps = 6/308 (1%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+SK T ++++ +A+AG V + + + N L+ I++ LC R +
Sbjct: 850 ISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNM----HLYRIMISLLCHNKRFRD 905
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ + + P + V N LL + + N + + + + P+ TY TL
Sbjct: 906 VELMVAEME--GAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 963
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ Y R R + L+ EM K G+ P Y ++ +A +E+ + E
Sbjct: 964 IVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGY 1023
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
Y ++K Y A + A +L M G P+ T + + G ++A
Sbjct: 1024 RLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEK 1083
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ + S L Y +L + L I EMK G + D T I
Sbjct: 1084 VLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAAS 1143
Query: 331 RMYKFDEA 338
+ D+A
Sbjct: 1144 LCEQTDDA 1151
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ILL ++K + A+ + EMR + N Y +++ Y R +A L
Sbjct: 990 PKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHL 1049
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M+++GIEP + ++ +G +E ++ + + Y++++ Y +
Sbjct: 1050 LSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLR 1109
Query: 227 AGDLE-GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDR 284
D G +K+L+M G P + F R S + +DA+ L + + + G+ P R
Sbjct: 1110 NRDYSLGITKLLEMK-RDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIR 1168
Query: 285 L 285
L
Sbjct: 1169 L 1169
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 161/339 (47%), Gaps = 10/339 (2%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
L D+I V+ F +L+ RYA A V+ AI F N+ F+ F+I
Sbjct: 168 LFDEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDY----GFEVDLVGFQI 223
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL SLC+ V+ A F ++K+ + P ++ +NI+LNGW ++ DA+R W E+
Sbjct: 224 LLMSLCRYKHVEEAEALFLQKKD---EFPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIA 280
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ P++ TYGT + + ++ A++L M ++GI P+ + N +ID L + E
Sbjct: 281 SKLKPDLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPE 340
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + TY +L+K +CK E ++L M +G P+ TY Y +
Sbjct: 341 ALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILK 400
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
K D MNL ++M ESG D TY+++L + QV +EM+ G
Sbjct: 401 TTE---KPRDVMNLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGP 457
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
D + T+++H L + D+A + M RG+ P T
Sbjct: 458 DQRSFTIMVHGLHSQGQLDQALQYYTTMKSRGMTPEPRT 496
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 138/328 (42%), Gaps = 40/328 (12%)
Query: 50 EAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTV 109
+ A+ F +A L ++ G + +LD L + +V+ + F + E + T
Sbjct: 127 QVALLFFTWAAGL---PTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTN 183
Query: 110 RVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
R++ +LLN + + V++A + + ++V + L+ CR + V+ A L +
Sbjct: 184 RMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ 243
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
+ E P + ++ ++ G+C G
Sbjct: 244 KKDEF------------------------------------PPVIKSWNIILNGWCVKGS 267
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
L A ++ +I+ P TY F +K GK+ A+ L+ M E G PD +
Sbjct: 268 LPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNC 327
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ LC + K+ A+++ EM RGC D+ T LI C++ + ++ +DM ++G
Sbjct: 328 IIDQLCFKKKIPEALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKG 387
Query: 350 LVPHYLTFKR-LNDEFKKRGMTALAQKL 376
P+ +T+ L K R + L Q++
Sbjct: 388 CSPNNMTYTYILKTTEKPRDVMNLIQRM 415
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 158/302 (52%), Gaps = 5/302 (1%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
+F + + + +IL+ + K + + E F ++ D +V N L++G + +
Sbjct: 143 SFCANSIIVDILVWADAKNLKTRLGFEAF--KRASDYGLKLSVTSCNPLMSGLVK---MY 197
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A+ EM+ + + PN VT+ L++G+C + V A+++ EM ++G++PN + YN++I
Sbjct: 198 KADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLI 257
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+GL G+ E + + ++ + P ++T+ +L+ G+CK ++ A ++ + M +
Sbjct: 258 NGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRIT 317
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ TTYN + K +EDA LYR M+ G PD TY+ L+ LC++ L+ A
Sbjct: 318 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNR 377
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
EM + DL T +L+ LC + + ++M ++GL P LT+ + D + K
Sbjct: 378 VSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSK 437
Query: 367 RG 368
G
Sbjct: 438 EG 439
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 2/226 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+D C V A + F + Q P V YN L+NG + V +A +
Sbjct: 218 FNILIDGFCNDKNVSVAMKVFAEMNR--QGVKPNVVTYNSLINGLCNNGKVNEATTLRDQ 275
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN++T+ L+ G+C+ + V +A L ++M K+ I PN YN +ID +
Sbjct: 276 MVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDEN 335
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ + L P + TY L+ G C+ GDLEGA + M ++ TYN
Sbjct: 336 MEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNI 395
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G+++ + L +M + G P +LTY+ ++ KE L
Sbjct: 396 LMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNL 441
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 26/323 (8%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LD+ + + S FH S+ + +IL+ W +KN+K F R
Sbjct: 117 FLDNCVQNDKNYPVSFIFHAISVSGDSFCANSIIVDILV--WADAKNLKTRLGFEAFKRA 174
Query: 138 EN--VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
+ + +V + L+ G ++ + D ++KEM+ +GI PN + +N +IDG
Sbjct: 175 SDYGLKLSVTSCNPLMSGLVKMYKADA---ILKEMKADGICPNEVTFNILIDGFCND--- 228
Query: 196 EEVSGMMERFL-VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ VS M+ F + G P +VTY SL+ G C G + A+ + M++ P+ T+
Sbjct: 229 KNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITH 288
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N F K V+ A L+ M + TP+ TY+IL+ CK++ ++ A + + M
Sbjct: 289 NALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLG 348
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G D+ T LI LCR + A +M + L +T+ L D +G
Sbjct: 349 KGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKG---- 404
Query: 373 AQKLCNVMSSVPRSMELLDSRCK 395
+ +++ LLD CK
Sbjct: 405 ---------EMKKTLRLLDEMCK 418
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
P+ ++ + L+ + + MV+ A FE DM K + + IL+D+ CK
Sbjct: 283 PNIITHNA---LLNGFCKNKMVKQAGELFE-----DMPKQRITPNVTTYNILIDAYCKDE 334
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + R L + P V YN L+ G R +++ A EM +++ +++T
Sbjct: 335 NMEDAFALY--RIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLIT 392
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
Y L++ C + + +RL+ EM K+G++P+ + YNT+IDG + G +
Sbjct: 393 YNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQ 443
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 162/341 (47%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + +T LI + G + +A E N + +K + + IL+D CK+GR
Sbjct: 12 PDIFTYNT---LILGLCKKGYLVSA---RELMNEMQ-IKGCEPNVITYTILIDRFCKEGR 64
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A + + A YN L++ + + V+DA + +M + P++ T+
Sbjct: 65 LEEARNVLDEMS--GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ G C++ + + A+ L ++M EG+ N I YNT+I + G +E ++ L
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+TY L+K C+AG++E + + M+S+G P+ + N + G ++
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ R MI G TPD +TY+ L+ LCK + A+ + +++ G D T LI
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ FD+A + G +P+ +T+ L F K G
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LCK+G + +A E ++ + + P V Y IL++ + + +++A E
Sbjct: 17 YNTLILGLCKKGYLVSARELMNEMQI--KGCEPNVITYTILIDRFCKEGRLEEARNVLDE 74
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + N V Y L+ C+ +V A+ + +M +G +P+ +N++I GL + +
Sbjct: 75 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 134
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
FEE G+ + L+ +TY +L+ + + G ++ A K++ M+ RG TYN
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + G +E + L+ M+ G P+ ++ +IL+ LC+ + A++ ++M RG
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+ T LI+ LC+ + EA F+ + G+ P +T+ L K GM
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 309
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L P + YN L+ G + + A EM+ + PNV+TY L++ +C+ R+
Sbjct: 6 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 65
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
+ A ++ EM +G+ NA+ YN +I L + + ++ M P + T+ SL
Sbjct: 66 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 125
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ G CK E A + + M+ G + + TYN F + G +++A+ L M+ G
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
D +TY+ L+K LC+ ++ + + ++M +G + + + +LI+ LCR A
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DMI RGL P +T+ L + K G A L
Sbjct: 246 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 281
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 97/180 (53%)
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
M E L GP + TY +L+ G CK G L A +++ M +G P+ TY F
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G++E+A N+ +M G + + Y+ L+ LCK++K+ A+ + +M +GC D+
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T LI LC++ KF+EA ++DM+ G++ + +T+ L F +RG A KL N M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 168 KEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
+ M G P+ YNT+I GL + G +M + P ++TYT L+ +CK
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G LE A +L M +G + YN K KV+DA+N++ M G PD T+
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 288 HILLKILCK----EDKLDL-------------------------------AIQVSKEMKC 312
+ L+ LCK E+ L L A+++ +M
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
RGC +D T LI LCR ++ A FEDM+ +GL P+ ++ L + + G
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 238
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
YN L+ R+ N++ + +M + + PN ++ L+ G CR + A+ +++M
Sbjct: 191 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ P+ + YN++I+GL + GR +E + ++ V P +TY +L+ +CK G
Sbjct: 251 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 310
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ A +L + GF+P+ T+ F K G E
Sbjct: 311 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+ C + R A K + D P YN +L+G + + +A L+
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMR--DYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + + PN T+ LV G CRL + A +++ M + + P+A YN +I G + GR
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + E + P +VTY +L+ G + G E K+++ M RG P+ TYN
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++F K GK+++ RKM ESG PD +TY+ L+ CK K+D A ++ EM +G
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+D T ++ LCR K DEA RRG
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 157/341 (46%), Gaps = 37/341 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +LD LCK+GR+ A + K ++ P +NIL+ G R +K+A
Sbjct: 235 YNTILDGLCKKGRLNEARDLLLDMK--NKGLFPNRTTFNILVVGCCRLGWLKEAANVIEL 292
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +V P+ TY ++ G+C+ R+ A+RL +EM + P+ + YNT+I+G E G
Sbjct: 293 MSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGS 352
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE ++E P VTY +VK + K G ++ K ++ M G LP TYN
Sbjct: 353 SEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNT 412
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD------------- 301
+ K GK+++A L +M G D +T + +L+ LC+E KLD
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472
Query: 302 ----------------------LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
A+++ EMK + + T +I LC+M K ++A
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAI 532
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ ++++ GLVP +T+ + + + G A + N M
Sbjct: 533 DKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 180/427 (42%), Gaps = 81/427 (18%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + A LLLD P+ + TF IL+ R G ++ A E + +
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPN---RTTFNILVVGCCRLGWLKEAANVIELMSQNSV 298
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSK 123
V + A + +++ CKQGR+ +E R+E++ +P V YN L+NG F
Sbjct: 299 VPD----AWTYNVMISGFCKQGRI---AEAMRLREEMENLKLSPDVVTYNTLINGCFEHG 351
Query: 124 NVKDAERFWLEMRKENVTPN-----------------------------------VVTYG 148
+ ++ + EM + PN +VTY
Sbjct: 352 SSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYN 411
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM-----E 203
TL+ +C++ ++D A RL+ EM ++G++ + + NT++ L + +E ++
Sbjct: 412 TLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR 471
Query: 204 RFLVCEPG------------------------------PTMVTYTSLVKGYCKAGDLEGA 233
+ V E P+++TY S++ G C+ G A
Sbjct: 472 GYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQA 531
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
L ++ G +P TYN + + G+VE A + KM+E + PD +T + LL
Sbjct: 532 IDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCG 591
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LCKE L+ A+++ +G D+D + +I LC+ +F EA E+M + L P
Sbjct: 592 LCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPD 651
Query: 354 YLTFKRL 360
T+ +
Sbjct: 652 CYTYNAI 658
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 40/315 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR---SKNVKDAER 130
L +I + + GR A++ F++ K L PT+ N LLN R S +++ ++
Sbjct: 126 LLDISIGAYVACGRPHQAAQIFNRMKRL--GMQPTLLTCNTLLNALVRFPSSHSIRLSKA 183
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ + K V N ++ L+ G C R AIR++ +MR G P+ I YNT++DGL
Sbjct: 184 VFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLC 243
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ GR E ++ P T+ LV G C+ G L+ A+ ++++M +P
Sbjct: 244 KKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW 303
Query: 251 TYNYFFRYFSKFGKVEDAMNLYR-------------------------------KMIES- 278
TYN F K G++ +AM L K+IE
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363
Query: 279 ---GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G P+ +TY++++K K+ K+D + ++M+ GC D+ T LI C++ K
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Query: 336 DEASAEFEDMIRRGL 350
DEA ++M R+GL
Sbjct: 424 DEAFRLMDEMGRKGL 438
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 9/265 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V+ +T LI + + G ++ A F + + K +L +LC++
Sbjct: 404 LPDIVTYNT---LISWHCKVGKMDEA---FRLMDEMGR-KGLKMDDVTLNTMLRALCRER 456
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + + + + Y L+ G+F+ + A R W EM+++ + P+++T
Sbjct: 457 KLDEAHDLLCSARR--RGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIIT 514
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +++ G C++ + ++AI + E+ + G+ P+ I YNT+I G + G+ E+ + +
Sbjct: 515 YNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VT +L+ G CK G LE A K+ IS+G +YN K +
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFG 634
Query: 267 DAMNLYRKMIESGYTPDRLTYHILL 291
+A +L +M E PD TY+ +L
Sbjct: 635 EAFDLLEEMEEKKLGPDCYTYNAIL 659
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 136/301 (45%), Gaps = 25/301 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M++ L + ++ D A LL D VS T +I ++ +A +W
Sbjct: 448 MLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQA-LRLW------ 500
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
D +K + S+ + ++ LC+ G+ A + + L+ P YN +++G
Sbjct: 501 --DEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL--LESGLVPDEITYNTIIHG 556
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + V+ A +F +M ++N P+VVT TL+ G C+ +++A++L +G + +
Sbjct: 557 YCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVD 616
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A+ YNT+I L + RF E ++E + GP TY +++ G AG ++ A + +
Sbjct: 617 AVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFIS 676
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ +G + N F + GK +DA I P+ + Y + LC +
Sbjct: 677 KIAEKG-----KSENQFL----ELGKRQDART---SEIPQEPHPNAIAYSNKINELCSQG 724
Query: 299 K 299
+
Sbjct: 725 R 725
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 3/213 (1%)
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV---SGMMERFLV 207
+ Y R +A ++ M++ G++P + NT+++ LV + + F+
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
++ L+ G C A ++L M G P TYN K G++ +
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A +L M G P+R T++IL+ C+ L A V + M D T ++I
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C+ + EA E+M L P +T+ L
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTL 343
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 3/208 (1%)
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG---YCKAGDLEGASKILKMMIS 242
I V GR + + + R PT++T +L+ + + + + + I
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G + ++N + +A+ + KM + G PD +TY+ +L LCK+ +L+
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + +MK +G + T +L+ CR+ EA+ E M + +VP T+ +
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310
Query: 363 EFKKRGMTALAQKLCNVMSSVPRSMELL 390
F K+G A A +L M ++ S +++
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVV 338
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD ++ +T +I Y + G VE A F+F N + + KNF LL LCK+G
Sbjct: 544 VPDEITYNT---IIHGYCQEGQVEKA---FQFHNKM-VEKNFKPDVVTCNTLLCGLCKEG 596
Query: 87 RVKAASEYFH----KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
++ A + F+ K K++D YN ++ + K +A EM ++ + P
Sbjct: 597 MLEKALKLFNTWISKGKDVD------AVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGP 650
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-----------------------IEPNA 179
+ TY ++ G R+ A + ++ ++G PNA
Sbjct: 651 DCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNA 710
Query: 180 IVYNTVIDGLVEAGRFEE 197
I Y+ I+ L GR+++
Sbjct: 711 IAYSNKINELCSQGRYKD 728
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 162/328 (49%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D K G ++ + F++ K D P + YN L+N + + + + A ++ E
Sbjct: 268 YNSLIDGYGKVGSLEEVASLFNEMK--DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSE 325
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + PNVVTY TL++ +C+ + AI+L+ +MR+ G+ PN Y ++ID +AG
Sbjct: 326 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGN 385
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ L +VTYT+L+ G CKAG + A ++ + M+ G P+ Y
Sbjct: 386 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 445
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K ++EDAM + ++M E PD + Y ++ C + KL+ + +EMK RG
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA- 373
+ ST +I + K +A F++M G+ +T+ L D + G+ LA
Sbjct: 506 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAV 565
Query: 374 QKLCNVMS-----SVPRSMELLDSRCKD 396
C ++S +V L+D C +
Sbjct: 566 DYFCRMLSLGLQPNVAVYTSLIDGLCXN 593
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 151/315 (47%), Gaps = 2/315 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LLD LCK GR+ A E F R L +P +VY L++G+ +++ ++DA + +
Sbjct: 408 YTALLDGLCKAGRMIEAEEVF--RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 465
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N+ P+++ YG+++ G+C R+++ +++EM+ GI N ++ T+ID +AG+
Sbjct: 466 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 525
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + T+VTY L+ G C+AG +E A M+S G P+ Y
Sbjct: 526 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTS 585
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+E A L+ +M G TPD + L+ K L A+ + M
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ DL T L+ + + +A F +MI +G++P + L E+ KRG A
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705
Query: 375 KLCNVMSSVPRSMEL 389
+L N M + S E
Sbjct: 706 ELKNEMERMAYSFEF 720
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 11/364 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFANNLDMVKNFDSGASLFEILLDSLCKQ 85
VPD + T+ LI Y + + A F E NN + L+D+ CK+
Sbjct: 297 VPDII---TYNGLINCYCKFEKMPRAFEYFSEMKNN-----GLKPNVVTYSTLIDAFCKE 348
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G ++ A + + P Y L++ ++ N+ +A + +M + V N+V
Sbjct: 349 GMMQGAIKLLXDMRR--TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 406
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L++G C+ R+ A + + M K+GI PN VY ++ G ++A R E+ ++++
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
C P ++ Y S++ G+C LE IL+ M SRG +P + K GK
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA+N +++M + G +TY +L+ LC+ ++LA+ M G ++ T L
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
I LC + A F++M RG+ P F L D K G A L + M+ +
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 646
Query: 386 SMEL 389
+L
Sbjct: 647 EFDL 650
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 2/312 (0%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
SG+ +F++L + G ++ A+E F + + P R N LL+ +S N +
Sbjct: 158 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRT--LPKARSCNFLLHRLSKSGNGQLVR 215
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+F+ +M + P+V TY +++ C+ ++ + RL +MR+ G+ P+ + YN++IDG
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G EEV+ + P ++TY L+ YCK + A + M + G P+
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY+ F K G ++ A+ L M +G P+ TY L+ CK L A ++ +
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
M G +++ T T L+ LC+ + EA F M++ G+ P+ + L + K
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 370 TALAQKLCNVMS 381
A K+ M+
Sbjct: 456 MEDAMKILKQMT 467
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 148/310 (47%), Gaps = 4/310 (1%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
DSG +++ ++C+QG V E K P + YN +L G +K
Sbjct: 175 TLDSGNC--NLVVSAICEQGCVDEGVELLRKLPSF--GCEPDIVSYNAVLKGLCMAKRWD 230
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
D E +EM + PNV T+ TL+ CR ++ + +M + G P+ +Y T+I
Sbjct: 231 DVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATII 290
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
DG+ + G E + ++ R P +V Y +++KG C A E A +L M
Sbjct: 291 DGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP 350
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
T+N +F + G V+ + L +M+E G PD +TY ++ CKE +D A+ +
Sbjct: 351 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML 410
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
K M GC + + T+++ LCR ++ +A MI++G +P+ +TF L + K
Sbjct: 411 LKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK 470
Query: 367 RGMTALAQKL 376
+G+ A +L
Sbjct: 471 KGLVEQAIEL 480
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 148/298 (49%), Gaps = 2/298 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ F L+ LC+ G + E + E P +R+Y +++G + + + A
Sbjct: 249 ATFNTLIAYLCRNGLFEQVHEALSQMPE--HGCTPDLRMYATIIDGICKDGHHEVANDIL 306
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M + PNVV Y T+++G C R + A L+ EM +E + + +N ++D +
Sbjct: 307 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 366
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G + V ++E+ L P ++TYT+++ G+CK G ++ A +LK M + G P+ +Y
Sbjct: 367 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 426
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ + + DA L MI+ G P+ +T++ L+ +CK+ ++ AI++ K+M
Sbjct: 427 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLV 486
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
GC DL + + +I L + K +EA MI +G+ P+ + + + + G T
Sbjct: 487 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRT 544
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 180/423 (42%), Gaps = 56/423 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L AK +D L+++ + P+ TF LI R G+ E +
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVGCPPNVA---TFNTLIAYLCRNGLFE------QVHE 269
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L + L + ++D +CK G + A++ + P V YN +L G
Sbjct: 270 ALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSY--GLKPNVVCYNTVLKG 327
Query: 119 WFRSKNVKDAERFWLEMRKENVT-----------------------------------PN 143
++ ++AE EM +E+ P+
Sbjct: 328 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF----EEVS 199
V+TY T++ G+C+ VD A+ L+K M G +PN I Y V+ GL A R+ E +S
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 447
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
M+++ C P P VT+ +L+ CK G +E A ++LK M+ G P +Y+
Sbjct: 448 HMIQQG--CLPNP--VTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 503
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
K GK E+A+ L MI G TP+ + Y + L +E + D IQ+ ++ D
Sbjct: 504 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDA 563
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
+I LC+ ++ D A F M+ G +P+ T+ L G+ AQ L +
Sbjct: 564 ALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSE 623
Query: 380 MSS 382
+ S
Sbjct: 624 LCS 626
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 7/285 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL+D C+ G V E + L+ P V Y ++NG+ + V +A
Sbjct: 356 FNILVDFFCQNGLVDRVIELLEQM--LEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 413
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M PN ++Y +++G CR R A L+ M ++G PN + +NT+I+ + + G
Sbjct: 414 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 473
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ ++++ LV P +++Y++++ G KAG E A ++L +MI++G P+ Y+
Sbjct: 474 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
S+ G+ + + ++ + ++ D Y+ ++ LCK + D AI M G
Sbjct: 534 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 593
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM-----IRRGLVPHY 354
C + T T+LI L EA ++ +R+ LV H+
Sbjct: 594 CMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHF 638
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
VV Y ++ GYCR +V A RL + + PNA Y ++ L G + ++
Sbjct: 75 GVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADALTVL 131
Query: 203 ERFLV--CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ + C P M +++ C+ G A + L+++ ++G N
Sbjct: 132 DEMPLRGCAATPPMCHV--ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAIC 189
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ G V++ + L RK+ G PD ++Y+ +LK LC + D ++ EM GC ++
Sbjct: 190 EQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVA 249
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T LI LCR F++ M G P + + D K G +A + + M
Sbjct: 250 TFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 309
Query: 381 SS 382
S
Sbjct: 310 PS 311
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 14/363 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ A+A +FD A L+++ + G E +S + L+ + G V AI F F
Sbjct: 134 LVTSFAQAGKFDLAKKLIIE-VQGEEAR--ISSFVYNYLLNELVKGGKVHEAI--FLFKE 188
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
NL F S + F IL+ LC+ G V+ E F+ + P V YN L++G
Sbjct: 189 NL----AFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSF--GCLPDVVTYNTLISG 242
Query: 119 WFRSKNVKDAERFWLEMRKEN-VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
++ + A E++ N +P+V+TY +++ G+ +L +++ A L +EM + GIEP
Sbjct: 243 LCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEP 302
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ +N +IDG + G M E+ P +VT+TSL+ GYC+ GD+ K+
Sbjct: 303 TVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVW 362
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+M +R P+ TY+ K ++ +A +L R++ S P Y+ ++ CK
Sbjct: 363 DVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKA 422
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+D A + EM+ + C D T T+LI C + EA F+ M+ G P +T
Sbjct: 423 GNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITI 482
Query: 358 KRL 360
L
Sbjct: 483 SSL 485
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
VYN LLN + V +A + E + PN T+ L+ G CR+ V++ L M
Sbjct: 165 VYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAM 224
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV-CEPGPTMVTYTSLVKGYCKAGD 229
+ G P+ + YNT+I GL +A + +++ + P ++TYTS++ G+ K G
Sbjct: 225 QSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGK 284
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
LE AS + + MI G P+ T+N F K G + A ++ KM PD +T+
Sbjct: 285 LEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTS 344
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ C+ + L ++V MK R ++ T +++I+ LC+ + EA +
Sbjct: 345 LIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSD 404
Query: 350 LVPHYLTFKRLNDEFKKRG 368
+ P + + D F K G
Sbjct: 405 VFPKPFIYNPVIDGFCKAG 423
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 136/280 (48%), Gaps = 14/280 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE--VPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+I L KA E D A C LL ++ PD + T+ +I + + G +EAA FE
Sbjct: 239 LISGLCKANELDRA-CDLLKEVQSRNDCSPDVM---TYTSIISGFRKLGKLEAASVLFE- 293
Query: 59 ANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+M+++ + F +L+D K G + AA E H+ K S P V + L++
Sbjct: 294 ----EMIRSGIEPTVVTFNVLIDGFGKIGNMVAA-EAMHE-KMASYSCIPDVVTFTSLID 347
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G+ R+ +++ + W M+ NV+PN+ TY ++ C+ R+ A L+++++ + P
Sbjct: 348 GYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFP 407
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+YN VIDG +AG +E + ++ P VT+T L+ G+C G + A I
Sbjct: 408 KPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIF 467
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
K M++ G P T + K GK +A ++ + E
Sbjct: 468 KKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASE 507
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 147/340 (43%), Gaps = 37/340 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + A L + + H P+ TF ILIR R G VE F
Sbjct: 169 LLNELVKGGKVHEAIFLFKENLAFHSPPN---TWTFNILIRGLCRVGEVEKGFELFNAMQ 225
Query: 61 NLDMVKNFDSGASLFEIL-----LDSLC---------------------------KQGRV 88
+ + + + +L L LD C K G++
Sbjct: 226 SFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKL 285
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
+AAS F + + PTV +N+L++G+ + N+ AE +M + P+VVT+
Sbjct: 286 EAASVLFEEM--IRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFT 343
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
+L++GYCR + +++ M+ + PN Y+ +I+ L + R E ++ +
Sbjct: 344 SLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCS 403
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+ P Y ++ G+CKAG+++ A+ I+ M + P T+ G++ +A
Sbjct: 404 DVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEA 463
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
+++++KM+ G PD +T L+ L K K A + +
Sbjct: 464 LDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQ 503
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 7/257 (2%)
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY L+ C++ D ++ MR +G ++ V ++ +AG+F+ ++
Sbjct: 95 TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E + Y L+ K G + A + K ++ P+ T+N R + G+V
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTM 324
E L+ M G PD +TY+ L+ LCK ++LD A + KE++ R C D+ T T
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS-- 382
+I ++ K + AS FE+MIR G+ P +TF L D F K G A+ + M+S
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334
Query: 383 -VPRSM---ELLDSRCK 395
+P + L+D C+
Sbjct: 335 CIPDVVTFTSLIDGYCR 351
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 7/269 (2%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + + G LV + + + D A +L+ E++ E ++ VYN +++ LV+ G+
Sbjct: 119 MRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGK 178
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + L P T+ L++G C+ G++E ++ M S G LP TYN
Sbjct: 179 VHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNT 238
Query: 255 FFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K +++ A +L +++ + +PD +TY ++ K KL+ A + +EM
Sbjct: 239 LISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRS 298
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + + T +LI ++ A A E M +P +TF L D + + G L
Sbjct: 299 GIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLG 358
Query: 374 QKLCNVMSSVPRSME------LLDSRCKD 396
K+ +VM + S ++++ CKD
Sbjct: 359 LKVWDVMKARNVSPNIYTYSVIINALCKD 387
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 167/365 (45%), Gaps = 50/365 (13%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHK 97
LI + + G + AA F+ +M+ N ++ L+ CK+G + A +H+
Sbjct: 431 LISGHCKLGKLRAAKSLFD-----EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ +P + L++G + + +A + + EM + NV PN VTY L+EG+C+
Sbjct: 486 MT--GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE-------VSGMMERFLVCEP 210
RA L+ EM ++G+ P+ Y +I GL GR E + G ++ E
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG 603
Query: 211 G-PTMVTYTSLVKGYCKAGDLEGASKILKMMIS--------------------------- 242
P +VTYT+L+ G CK G ++ A + + M++
Sbjct: 604 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 663
Query: 243 -------RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
GFL + TYN R F K G++++A + MI+SG +PD ++Y ++ C
Sbjct: 664 QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ L AI++ + M RG + D LI+ C + +A +DM+RRG+ P+
Sbjct: 724 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 783
Query: 356 TFKRL 360
T+ L
Sbjct: 784 TYNSL 788
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 13/318 (4%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+D L K+G + +A + +K K+ AP++ VYN L+N + + +AE + M
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKF--GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + PN VTY L++ +C+ ++D A+ + +M + GI+ Y+++I G + G+
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P +V YTSL+ GYCK G+L A ++ M +G P+ T+
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
++ +A L+ +M+E P+ +TY++L++ CKE A ++ EM +G
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVP 563
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIR--------RGLVPHYLTFKRLNDEFKKRGM 369
D T LI LC + EA D+ G +P+ +T+ L + K G+
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGL 623
Query: 370 TALAQKLCNVM---SSVP 384
A+ LC M +S+P
Sbjct: 624 MDKAELLCREMLASNSLP 641
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 30/390 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + K + D A L + GH+ F + T+ ILI + + G ++ A+ F
Sbjct: 361 LINSMCKDGKLDEAESLFNNM--GHK-GLFPNDVTYSILIDSFCKRGKLDVAL---HFLG 414
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V + + L+ CK G+++AA F + + P V +Y L++G+
Sbjct: 415 KMTEV-GIKATVYPYSSLISGHCKLGKLRAAKSLFDEM--IANGLKPNVVIYTSLISGYC 471
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A R + EM + ++PN T+ L+ G C R+ A +L EM + + PN +
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531
Query: 181 VYNTVIDGLVEAGR----FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG-------- 228
YN +I+G + G FE + M+E+ LV P TY L+ G C G
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLV----PDTYTYRPLISGLCSTGRVSEAREF 587
Query: 229 --DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
DL+G + L + G LP+ TY K G ++ A L R+M+ S P++ T
Sbjct: 588 MNDLQGEQQKLNEI--EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L L E ++ AIQ+ ++ G + T +LI C++ + EA+ +MI
Sbjct: 646 YACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 704
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
G+ P +++ + E+ +RG A KL
Sbjct: 705 DSGISPDCISYSTIIYEYCRRGDLKEAIKL 734
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 168/386 (43%), Gaps = 21/386 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K +EF++ ++ + I VP + V +R+ G F+ N
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS------AFDLVNK--- 345
Query: 65 VKNFDSGASLF--EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
VK F SLF L++S+CK G++ A F+ + P Y+IL++ + +
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH--KGLFPNDVTYSILIDSFCKR 403
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+ A F +M + + V Y +L+ G+C+L ++ A L EM G++PN ++Y
Sbjct: 404 GKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
++I G + G + P T+T+L+ G C A + A+K+ M+
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-- 300
+P+ TYN K G A L +M+E G PD TY L+ LC ++
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 301 ------DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
DL + K + GC ++ T T LI+ LC++ D+A +M+ +P+
Sbjct: 584 AREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVM 380
T+ D G A +L +V+
Sbjct: 644 NTYACFLDYLTSEGNIEKAIQLHDVL 669
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 152/355 (42%), Gaps = 28/355 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K E +A+ L + G P+ TF LI A + A F
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPN---TYTFTALISGLCHANRMAEANKLFG--- 519
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+MV+ N + +L++ CK+G A E + E + P Y L++G
Sbjct: 520 --EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE--KGLVPDTYTYRPLISGL 575
Query: 120 FRSKNVKDAERFWLEMRKEN--------VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+ V +A F +++ E PNVVTY L+ G C++ +D+A L +EM
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKA 227
PN Y +D L G E+ ++E FL VTY L++G+CK
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA-----NTVTYNILIRGFCKL 690
Query: 228 GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTY 287
G ++ A+++L MI G P +Y+ + + G +++A+ L+ M+ G PD + Y
Sbjct: 691 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 750
Query: 288 HILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ L+ C +L A ++ +M RG + T LIH C M + F
Sbjct: 751 NFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 152/348 (43%), Gaps = 6/348 (1%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+S T+ + IR + +W NL K + + L+ LCK +A
Sbjct: 248 LSVATYNVFIRGLCK----NQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEA 303
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E ++ E + P+ + L++G + N+ A +++K V P++ Y L
Sbjct: 304 GEEMMNEMIEF--GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ C+ ++D A L M +G+ PN + Y+ +ID + G+ + + +
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
T+ Y+SL+ G+CK G L A + MI+ G P+ Y + K G++ +A
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
LY +M G +P+ T+ L+ LC +++ A ++ EM + T +LI C
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHC 541
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ A ++M+ +GLVP T++ L G + A++ N
Sbjct: 542 KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 35/308 (11%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR--------- 158
+V YN+ + G +++ V +A + + + +V TY TLV G C++
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308
Query: 159 --------------------------RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+ A LV +++K G+ P+ VYN +I+ + +
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+ +E + P VTY+ L+ +CK G L+ A L M G + Y
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ K GK+ A +L+ +MI +G P+ + Y L+ CKE +L A ++ EM
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G + T T LI LC + EA+ F +M+ ++P+ +T+ L + K G T
Sbjct: 489 KGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548
Query: 373 AQKLCNVM 380
A +L + M
Sbjct: 549 AFELLDEM 556
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 135/347 (38%), Gaps = 51/347 (14%)
Query: 73 SLFEILLDSLCK------QGRVKAASEYFHKRKELDQ----------SWAPTVRVYNILL 116
LFE LDS K G Y R+ELD P +R + +L
Sbjct: 128 GLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVL 187
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG R + + A + E+ + P+V Y +V C L+ RA ++ M G +
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD 247
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+ YN I GL + R E + + TY +LV G CK + E ++
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307
Query: 237 LKMMISRGFLPSPTT-----------------------------------YNYFFRYFSK 261
+ MI GF+PS YN K
Sbjct: 308 MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK 367
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
GK+++A +L+ M G P+ +TY IL+ CK KLD+A+ +M G +
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ LI C++ K A + F++MI GL P+ + + L + K G
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 147/380 (38%), Gaps = 63/380 (16%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
F N L + KNFD + F IL+ +L + AS + P
Sbjct: 79 FFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLN--P---------E 127
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G F E F RK N + + + L++ Y + RR + +V+ M GI P
Sbjct: 128 GLF--------ESFLDSYRKCNFS-TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILP 178
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ V++GL+ +F + + + P + YT++V+ C+ D A +++
Sbjct: 179 QIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI 238
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM---------------------------- 269
M S G S TYN F R K +V +A+
Sbjct: 239 GRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV 298
Query: 270 -------NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+ +MIE G+ P L+ L K+ + A + ++K G L
Sbjct: 299 EEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVY 358
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI+ +C+ K DEA + F +M +GL P+ +T+ L D F KRG +A M+
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418
Query: 383 V-------PRSMELLDSRCK 395
V P S L+ CK
Sbjct: 419 VGIKATVYPYS-SLISGHCK 437
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 18/226 (7%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ V T+ LI + G+++ A E + N + + LD L +G
Sbjct: 605 LPNVV---TYTALINGLCKIGLMDKA----ELLCREMLASNSLPNQNTYACFLDYLTSEG 657
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + L + + YNIL+ G+ + +++A + M ++P+ ++
Sbjct: 658 NIEKAIQL---HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 714
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVSGMM 202
Y T++ YCR + AI+L + M G+ P+ + YN +I G G FE MM
Sbjct: 715 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 774
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
R + P TY SL+ G C + + ++ FL S
Sbjct: 775 RRGV----KPNRATYNSLIHGTCLMSSVSSTADYFSCKLNWCFLLS 816
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 199/417 (47%), Gaps = 48/417 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+ K+L + ++ + W L D I P K TF +I + R G + +
Sbjct: 237 LFKLLLRVGDYGNVWKLFKDVIRRGPQP---CKYTFSGIILGFCRKGCIHLG------ES 287
Query: 61 NLDMVKNF--DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L ++ F + A + I++++ C +GR A +F+ +++ PTV +N ++N
Sbjct: 288 LLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM--IERGCNPTVVTFNTVINA 345
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + NV +A + + +++ +PN + Y TL+ GY ++R +D+A L +EMRK+GI P+
Sbjct: 346 FCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPD 405
Query: 179 AIVYNTVIDGLVEAGRFEE-----------------------VSGM---------MERFL 206
I +N ++ G + GR E+ VSG+ ME +
Sbjct: 406 GITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLM 465
Query: 207 -VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ E G P+++ + S++ Y +AG + A + K+M+ G PSP+T + S G
Sbjct: 466 DMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSING 525
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++++A L +MIE G + + + + +LL K + A + EM+ RG D+ +
Sbjct: 526 RLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFS 585
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
I L + +EA F +M+R+GL+P+ + L F K G A KL VM
Sbjct: 586 AFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVM 642
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 168/390 (43%), Gaps = 72/390 (18%)
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
NL + + + F ++++ CK+G V A + F KE+ ++P +YN L+NG+
Sbjct: 325 NLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEM--GFSPNAIMYNTLMNGYV 382
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY-------------------------- 154
+ + + A + EMRK+ + P+ +T+ LV G+
Sbjct: 383 KMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRS 442
Query: 155 ---------CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID------------------ 187
C R+D A+ + +M ++G+ P+ I +N+VI
Sbjct: 443 LFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 502
Query: 188 -----------------GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
GL GR +E + ++ + + + +T L+ + K GD+
Sbjct: 503 VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDV 562
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
GA + M RG P ++ F SK G VE+A N++ +M+ G P+ Y+ L
Sbjct: 563 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 622
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ CK KL+ A+++ K M+ RG D+ T+ M+I LC+ + A F DM + GL
Sbjct: 623 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 682
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P +T+ L + + K A L N M
Sbjct: 683 SPDIITYNTLINGYCKAFDMVNADNLVNRM 712
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 177/396 (44%), Gaps = 18/396 (4%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L A D A L+D + P ++ F +I Y++AG+ + A ++ + +
Sbjct: 451 LCWAGRLDEAMEFLMDMLEKGLSPSIIA---FNSVIAAYSQAGLEDKAFEAYKLMVHFGL 507
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+ + +SL L L GR++ A+E + +++ + + +LL+ +F+ +
Sbjct: 508 TPSPSTCSSL----LMGLSINGRLQEATELIGQM--IEKGLSVNNMAFTVLLDKFFKRGD 561
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V A+ W EM + + P+VV + ++G + V+ A + EM ++G+ PN YN+
Sbjct: 562 VVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNS 621
Query: 185 VIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+I G + G+ E M R L+ P + T ++ G CK G + A + M
Sbjct: 622 LICGFCKCGKLNEALKLEKVMRHRGLL----PDIFTTNMIIGGLCKQGRMRSAINVFMDM 677
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P TYN + K + +A NL +M SG PD TY+I + C ++
Sbjct: 678 HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRM 737
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ A+ + E+ G + T +++ +C D A +++ VP+ +T L
Sbjct: 738 NRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDI-LDRAMILTARLLKMAFVPNVVTANLL 796
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRCKD 396
+F K+GM + +S +P + + + + D
Sbjct: 797 LSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIMD 832
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 12/266 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQG 86
PD V+ F I ++ G+VE A F L+M+ K + L+ CK G
Sbjct: 579 PDVVAFSAF---IDGLSKQGLVEEAYNVF-----LEMLRKGLIPNNFAYNSLICGFCKCG 630
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A + ++ + P + N+++ G + ++ A +++M + ++P+++T
Sbjct: 631 KLNEALKL--EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIIT 688
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ GYC+ + A LV M G P+ YN I G + R M++ +
Sbjct: 689 YNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 748
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P VTY S++ G C + L+ A + ++ F+P+ T N F K G E
Sbjct: 749 SAGIVPNTVTYNSMLNGVC-SDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPE 807
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLK 292
+ K+ E Y D +TY I+ K
Sbjct: 808 RTLMWGHKLSEIPYAFDEITYKIMDK 833
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 14/294 (4%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
E + S C + AA E H + D W R+ G RS ++ E W
Sbjct: 140 ESTIRSCCVAAHLLAAEELRHVAQ--DVIWWVIARI------GVLRSGDL--VEFMW--- 186
Query: 136 RKENV-TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
R +V + +L+ + +A+ ++ MR+ G+ P+A + L+ G
Sbjct: 187 RGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGD 246
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ V + + + P P T++ ++ G+C+ G + +L +M P+ YN
Sbjct: 247 YGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNI 306
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+ DA+ + MIE G P +T++ ++ CKE + A ++ +K G
Sbjct: 307 VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 366
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ L++ +M + D+A+ +E+M ++G+ P +TF L K G
Sbjct: 367 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYG 420
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%)
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL++ + A A +IL M G PS + F+ + G + L++ +I
Sbjct: 201 SLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRR 260
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P + T+ ++ C++ + L + M C+ + ++I+ C + +A
Sbjct: 261 GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA 320
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A F MI RG P +TF + + F K G A+KL
Sbjct: 321 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 358
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 31/362 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF---- 56
++ +L + + F+ L+LD++ E FV +DT+ +L+ RYA A MVE AI F
Sbjct: 43 ILDILGRMRRFEEL-TLVLDEMSKRE--GFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRR 99
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
E LD+V F+ LL LC+ V A H + + ++ NI+L
Sbjct: 100 ELGLELDLVS--------FQKLLMYLCRYKHVDVAETLLHSK---GHEFGVDIKTMNIVL 148
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NGW NV++A+RFW ++ P+V TYGT ++ ++ A++L + M K +
Sbjct: 149 NGWCVLGNVREAKRFWKDIIASKCKPDVFTYGTFIKALTNKGKLGTAMKLYEAMWKMQCK 208
Query: 177 PNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
P+ ++ N VID L R E GM ER + P + TY SL+K CK G +E
Sbjct: 209 PDVVICNCVIDALCFKKRVPEALAVFEGMKERGCI----PNVATYNSLIKHMCKIGRMEK 264
Query: 233 ASKILKMMISR--GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
++L M + +P T+NY + K E+ + +M +G + T ++L
Sbjct: 265 VYELLDEMQEKKGSCMPDEITFNYLLKSLK---KPEEVAGVLERMKINGCKMNNDTCNLL 321
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
LK+ D + +EM+ G +D + T++IH L + ++A F +M +G+
Sbjct: 322 LKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWLYDKGRVEDALRYFGEMENKGM 381
Query: 351 VP 352
VP
Sbjct: 382 VP 383
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 5/223 (2%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
++ + Y +++ R+RR + ++ EM K + Y +++ A EE
Sbjct: 33 ISLSSCVYNEILDILGRMRRFEELTLVLDEMSKREGFVDEDTYRVLVNRYAGAHMVEEAI 92
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG--FLPSPTTYNYFFR 257
G + +V++ L+ C+ ++ A +L S+G F T N
Sbjct: 93 GAFNKRRELGLELDLVSFQKLLMYLCRYKHVDVAETLLH---SKGHEFGVDIKTMNIVLN 149
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ G V +A ++ +I S PD TY +K L + KL A+++ + M C
Sbjct: 150 GWCVLGNVREAKRFWKDIIASKCKPDVFTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKP 209
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+ +I LC + EA A FE M RG +P+ T+ L
Sbjct: 210 DVVICNCVIDALCFKKRVPEALAVFEGMKERGCIPNVATYNSL 252
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 37/210 (17%)
Query: 172 KEG-IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
KEG I ++ VYN ++D L RFEE++ +++
Sbjct: 29 KEGTISLSSCVYNEILDILGRMRRFEELTLVLD--------------------------- 61
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+M GF+ TY ++ VE+A+ + K E G D +++ L
Sbjct: 62 -------EMSKREGFV-DEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKL 113
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L LC+ +D+A + K +D+ T ++++ C + EA ++D+I
Sbjct: 114 LMYLCRYKHVDVA-ETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKC 172
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P T+ +G A KL M
Sbjct: 173 KPDVFTYGTFIKALTNKGKLGTAMKLYEAM 202
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 176/393 (44%), Gaps = 44/393 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L A EF A +L+++ E ++++ F+ + R Y R M AI F N
Sbjct: 56 MISKLVSANEFRPAE-EMLNRM--KEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMN 112
Query: 61 NLDMVKNFDSGASLFEILLD-------------------------------SLCKQ-GRV 88
+ S S+F IL++ +LCK G +
Sbjct: 113 DFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTI 172
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
AA E F R+ + P Y L+NG + +A+ + EM + +P+VVTY
Sbjct: 173 DAAFEIF--REMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYS 230
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ G C+ VD A+ L +M+K+ IEPN Y++++DGL + G E ++E +
Sbjct: 231 CLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRK 290
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P MVTY++L+ G CK G L A + L M +G P Y F K ++A
Sbjct: 291 RHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEA 350
Query: 269 MNLYRKMIESGYTPDRLTYHILLKI-------LCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
+M+ +P+R+T+ + +K+ LC L+ + Q+ M+ RG ID T
Sbjct: 351 ATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGT 410
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
L+ C+ +A+ F++M+ G VP +
Sbjct: 411 FDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDH 443
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 8/287 (2%)
Query: 76 EILLDSLCKQ-GRVKA---ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
EI L S+C+ GRV A FHK D PT + Y + +K A F
Sbjct: 86 EIFL-SICRGYGRVHMPLDAIRVFHKMN--DFGCKPTDKSYISVFAILVEENQLKVAMSF 142
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLR-RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ MR+ V +VV+ L++ C+ +D A + +EM K G +P++ Y T+I+GL
Sbjct: 143 YKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLC 202
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G+ E + + P++VTY+ L+ G C+AG+++ A + M + P+
Sbjct: 203 KLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVF 262
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ K G +AM L M+ + P+ +TY L+ LCKE KL A++ M
Sbjct: 263 TYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRM 322
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K +G D +I+ C + KF EA+ ++M+ + P+ +T+
Sbjct: 323 KLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTW 369
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 1/264 (0%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+ ++++ + + AE M++E + ++ GY R+ AIR+ +M
Sbjct: 52 TFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKM 111
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK-AGD 229
G +P Y +V LVE + + + ++V+ L+K CK +G
Sbjct: 112 NDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGT 171
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
++ A +I + M RG P TY K GK +A L+++M G +P +TY
Sbjct: 172 IDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSC 231
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
L+ LC+ +D A+ + +MK + + ++ T + L+ LC+ EA E M+R+
Sbjct: 232 LMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291
Query: 350 LVPHYLTFKRLNDEFKKRGMTALA 373
P+ +T+ L + K G A A
Sbjct: 292 HKPNMVTYSTLINGLCKEGKLAEA 315
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 21/245 (8%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ +AG V+ A+ F+ K + + L+D LCK G A E
Sbjct: 228 TYSCLMHGLCQAGNVDEAMGLFDKMKK----KAIEPNVFTYSSLMDGLCKNGGSLEAMEL 283
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P + Y+ L+NG + + +A M+ + + P+ YG ++ G+
Sbjct: 284 LEMM--VRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGF 341
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVY-------NTVIDGLVEAGR----FEEVSGMME 203
C +R+ A + EM I PN + + N V+ GL G F+ GM
Sbjct: 342 CNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRT 401
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
R + + G T+ SLVK +CK GDL A++I M+ G +P ++ F
Sbjct: 402 RGISIDAG----TFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRR 457
Query: 264 KVEDA 268
KV +A
Sbjct: 458 KVREA 462
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 149/310 (48%), Gaps = 9/310 (2%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVR 110
+W F + +L+ + + F IL+ S CK+G ++ A F + W P+V
Sbjct: 124 VWGF-YEESLEC--GYPASLYFFNILMHSFCKEGEIRLAQSVF----DAITKWGLRPSVV 176
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + ++ + R M+ V P+V TY L+ G C+ ++D L EM
Sbjct: 177 SFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEM 236
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ PN + + T+IDG + GR + + ++ L P +VTY +L+ G CK GDL
Sbjct: 237 LDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDL 296
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++ M +G P TY K G +E A +MI+ D + Y L
Sbjct: 297 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTAL 356
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G
Sbjct: 357 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGY 416
Query: 351 VPHYLTFKRL 360
VP +T+ L
Sbjct: 417 VPSVVTYNVL 426
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +I Y +G + AI + FD+ + E L+ K K ++
Sbjct: 73 FSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 128
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + ++ A+ + + K + P+VV++ TL+ GY
Sbjct: 129 --EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+L ++ RL K M+ G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE L+ A + M +D T LI LC+ +
Sbjct: 307 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRS 366
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 367 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 412
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 2/217 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ +E F + LD P + L++G ++ V A + +
Sbjct: 213 YSVLINGLCKESKMDDXNELFDEM--LDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 270
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++++P++VTY TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G
Sbjct: 271 MLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 330
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E R + V YT+L+ G C+ G A K+L+ M+S G P TY
Sbjct: 331 LETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 390
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
F K G V L ++M GY P +TY++L+
Sbjct: 391 IINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLM 427
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 113/243 (46%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ +C+ + A + + K G+ P+ + +NT+++G ++ G E + +
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQ 202
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + TY+ L+ G CK ++ +++ M+ G +P+ T+ K G+V+
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVD 262
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T T LI
Sbjct: 263 LAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 322
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRS 386
C+ + A MI+ + + + L + G + A+K+ M SV
Sbjct: 323 DGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382
Query: 387 MEL 389
E+
Sbjct: 383 PEI 385
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%)
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G+ S +N F K G++ A +++ + + G P ++++ L+ K L+
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEX 194
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ K M+ G D+ T ++LI+ LC+ K D+ + F++M+ GLVP+ +TF L D
Sbjct: 195 FRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDG 254
Query: 364 FKKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 255 HCKNGRVDLAMEIYKQMLSQSLSPDLV 281
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 278 PDLVTYNT---LIYGLCKKGDLKQAQ---DLIDEMSM-KGLKPDKITYTTLIDGSCKEGD 330
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ A EY + + + ++ Y L++G + DAE+ EM + P + TY
Sbjct: 331 LETAFEY--RXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 388
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++ +C+ V +L+KEM+++G P+ + YN +++G
Sbjct: 389 TMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 154/310 (49%), Gaps = 10/310 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ A+ LL + + +PD T+ LI + ++ + A+ FE
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIF---TYTTLITGFCKSKKSDDALRVFEQL- 115
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + F + L+D LCK+GR+K A + F + + S P YN L++G+
Sbjct: 116 ---VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK-SGSCMPNTVTYNSLISGFC 171
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R + +A M + +P+VVTY TL+ G+C+L R+D A L+ +M ++G+ PN +
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ +++DGL R + ++ PT+ TY +++ GYC+ LE A K M+
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF--ML 289
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
P+ ++N R K + +AM L + PD + Y ++ +LC+E K+
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349
Query: 301 DLAIQVSKEM 310
D A +V ++M
Sbjct: 350 DEACRVYRKM 359
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D PT YN L++G +++ +A EM P++ TY TL+ G+C+ ++ D
Sbjct: 47 DAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 106
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYT 218
A+R+ +++ G P+ + Y+ +IDGL + GR +E + R + + G P VTY
Sbjct: 107 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI--KSGSCMPNTVTYN 164
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL+ G+C+ G ++ A +L+ M G P TY F K +++DA +L +M
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G TP+ +T+ L+ LC+E++L A+ + EM+ + C + T ++ CR+ + +EA
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 39/326 (11%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAER 130
A + L+ LCK R ASE + +E+ S P + Y L+ G+ +SK DA R
Sbjct: 54 AVTYNSLISGLCKAER---ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYNTVIDGL 189
+ ++ P+VVTY L++G C+ R+ AI L M K G PN + YN++I G
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
G+ +E ++ER P +VTYT+L+ G+CK L+ A +L M +G P+
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKM--------------IESGYT-------------- 281
T+ + ++ DA+++ +M I GY
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290
Query: 282 -----PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
P+ ++++I+++ LCK ++ A+++ +E + R C+ D+ T +I +LCR K D
Sbjct: 291 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVD 350
Query: 337 EASAEFEDMIRR-GLVPHYLTFKRLN 361
EA + M+ G +P+ +T+ +
Sbjct: 351 EACRVYRKMLEEPGCLPNSITYSTFD 376
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 1/236 (0%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P VTY +L+ G C+ R A L++EM G P+ Y T+I G ++ + ++ +
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG-FLPSPTTYNYFFRYFS 260
E+ + P +VTY+ L+ G CK G L+ A + MI G +P+ TYN F
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ GK+++AMNL +M E+G +PD +TY L+ CK +LD A + +M +G ++
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T T L+ LCR + +A +M R+ P T+ + D + + A+K
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF 287
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 91/192 (47%), Gaps = 7/192 (3%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT VTY SL+ G CKA A +L+ M+ G +P TY F K K +DA+ +
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCRGCDIDLDTSTMLIHLLC 330
+ +++ G+ PD +TY L+ LCKE +L AI + M K C + T LI C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVP 384
RM K DEA E M G P +T+ L + F K A L N M+ +V
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 385 RSMELLDSRCKD 396
L+D C++
Sbjct: 232 TFTSLMDGLCRE 243
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I + + D A LL PD V T+ L+ + + ++ A ++ N
Sbjct: 166 LISGFCRMGKMDEAMNLLERMAETGSSPDVV---TYTTLMNGFCKLARLDDA---YDLLN 219
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F L+D LC++ R+ A + + +S +PTV YN +L+G+
Sbjct: 220 QMTR-KGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRR--KSCSPTVYTYNTILDGYC 276
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R +++A +F LE + + PNVV++ ++ G C++ R A+ LV+E R+ P+ +
Sbjct: 277 RVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 334
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSL 220
+Y TVID L + +E + + L EPG P +TY++
Sbjct: 335 MYTTVIDVLCREKKVDEACRVYRKMLE-EPGCLPNSITYSTF 375
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+P+ TYN K + +A +L +M+ SG PD TY L+ CK K D A++
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRLNDEF 364
V +++ RG D+ T + LI LC+ + EA F MI+ G +P+ +T+ L F
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
+ G A L M+ S +++
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVV 196
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 14/385 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +L KAK++D ++++ G ++ V+ +T ++RR+A AG E A+ F+
Sbjct: 128 VDILGKAKKWDRM-KEFVERMRGDKL---VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ KN +S +LLD+LCK+ RV+ A +L P +NI ++GW +
Sbjct: 184 FGLEKNTES----MNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCK 236
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ V++A EM+ P V++Y T++ YC+ + ++ EM G PN+I
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM-M 240
Y T++ L FEE + R P + Y L+ +AG LE A ++ ++ M
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY-TPDRLTYHILLKILCKEDK 299
G + +TYN + + + A+ L ++M S PD TY LL+ K
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 300 LDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ ++ KEM + +D T T LI LCR + A FE+MI + + P + T
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 476
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
L +E KK+ M A+++ ++M +V
Sbjct: 477 LLLEEVKKKNMHESAERIEHIMKTV 501
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 163/314 (51%), Gaps = 11/314 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K + A+ L + P+ ++ +T LI + AG + A F +
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT---LICAFCLAGQLMGA---FSLLH 209
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ ++KN + F IL+D+LCK+G K A + FH ++ + P V YNI++NG
Sbjct: 210 EM-ILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVN--PNVYSYNIMINGLC 264
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K V +A EM +N+ P+ VTY +L++G C+ R+ A+ L+ EM G + +
Sbjct: 265 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 324
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +++D L + ++ + + + PTM TYT+L+ G CK G L+ A ++ + +
Sbjct: 325 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 384
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G TY K G ++A+ + KM ++G P+ +T+ I+++ L ++D+
Sbjct: 385 LVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEN 444
Query: 301 DLAIQVSKEMKCRG 314
D A ++ EM +G
Sbjct: 445 DKAEKLLHEMIAKG 458
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 146/324 (45%), Gaps = 35/324 (10%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F + + LL+ LCK G + A + R D+S P V +Y+ +++G + K V +
Sbjct: 111 FQTNQVSYGTLLNGLCKTGETRCAIKLL--RMIEDRSTRPNVVMYSAIIDGLCKDKLVNE 168
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM----------------- 170
A + EM + PNV+TY TL+ +C ++ A L+ EM
Sbjct: 169 AYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILID 228
Query: 171 ----------------RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ G+ PN YN +I+GL + R +E ++ L P
Sbjct: 229 ALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 288
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY SL+ G CK+G + A ++ M RG TY K ++ A L+ K
Sbjct: 289 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 348
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M E G P TY L+ LCK +L A ++ + + +GC ID+ T T++I LC+
Sbjct: 349 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 408
Query: 335 FDEASAEFEDMIRRGLVPHYLTFK 358
FDEA A M G +P+ +TF+
Sbjct: 409 FDEALAIKSKMEDNGCIPNAVTFE 432
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 148/345 (42%), Gaps = 35/345 (10%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + IL++ C G++ A + K L + P + L+ G
Sbjct: 38 VKGIEQNLVTLSILINCFCHLGQM--AFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGE 95
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
VK F ++ + N V+YGTL+ G C+ AI+L++ + PN ++Y+
Sbjct: 96 VKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSA 155
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG------------ 232
+IDGL + E + E P ++TY +L+ +C AG L G
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215
Query: 233 ---------------------ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
A +I M+ G P+ +YN K +V++AMNL
Sbjct: 216 INPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 275
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
R+M+ PD +TY+ L+ LCK ++ A+ + EM RG D+ T T L+ LC+
Sbjct: 276 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 335
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D+A+A F M RG+ P T+ L D K G AQ+L
Sbjct: 336 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 380
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 144/277 (51%), Gaps = 4/277 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ + C G++ A H+ + ++ P V ++IL++ K K+A++ +
Sbjct: 188 YNTLICAFCLAGQLMGAFSLLHEM--ILKNINPDVYTFSILIDAL--CKEGKNAKQIFHA 243
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + V PNV +Y ++ G C+ +RVD A+ L++EM + + P+ + YN++IDGL ++GR
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+M +VTYTSL+ CK +L+ A+ + M RG P+ TY
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G++++A L++ ++ G D TY +++ LCKE D A+ + +M+ G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
C + T ++I L + D+A +MI +GL+
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + N+VT L+ +C L ++ + L+ ++ K G PN I + T++ GL G
Sbjct: 35 QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM-------------- 239
+++ ++ + V+Y +L+ G CK G+ A K+L+M
Sbjct: 95 EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154
Query: 240 ---------------------MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
M +R P+ TYN F G++ A +L +MI
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
PD T+ IL+ LCKE K A Q+ M G + ++ + ++I+ LC+ + DEA
Sbjct: 215 NINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM------SSVPRSMELLDS 392
+M+ + +VP +T+ L D K G A L N M + V LLD+
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 332
Query: 393 RCKD 396
CK+
Sbjct: 333 LCKN 336
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%)
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
T ++ + ++ +L+ I L K+M +GIE N + + +I+ G+
Sbjct: 7 TSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ + L P +T+T+L+KG C G+++ ++++ F + +Y
Sbjct: 67 LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G+ A+ L R + + P+ + Y ++ LCK+ ++ A + EM R ++
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
T LI C + A + +MI + + P TF L D K G A
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNA 237
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 102/223 (45%), Gaps = 6/223 (2%)
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I +N ++ LV+ + V + ++ V +VT + L+ +C G + + +L
Sbjct: 11 IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
++ G+ P+ T+ + G+V+ ++ + K++ + ++++Y LL LCK +
Sbjct: 71 ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
AI++ + ++ R ++ + +I LC+ +EA + +M R + P+ +T+
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190
Query: 360 LNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
L F G A L N+ V L+D+ CK+
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 170/372 (45%), Gaps = 20/372 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCKQGRVKA 90
T+ I IR RAG ++ A M + D G + +L+D+LC G++
Sbjct: 266 TYTICIRVLGRAGRIDEACRI--------MKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E F K K S P Y +L+ + ++ + FW EM + P+V+T+ L
Sbjct: 318 AMELFVKMKA--SSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTIL 375
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
V C+ +D A L+ MRK+G+ PN YNT+I GL+ R ++ +
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT TY + Y K+G + A + + M RG P+ N ++ G++ +A
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ ++ +G PD +TY++++K K ++D AI++ +M C+ D+ LI+ L
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM 387
+ + DEA F + L P +T+ L K G A +L M+ P ++
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615
Query: 388 ---ELLDSRCKD 396
+LD CK+
Sbjct: 616 TFNTILDCLCKN 627
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 3/306 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
S+ ++ LCK + A F + KEL PT+ YN L+ G+ N + A
Sbjct: 754 GSVLMPIIKVLCKHKQALVAQSVFIRFTKEL--GVKPTLESYNFLIEGFLGVHNDEMAWN 811
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ EM+ P+V TY L++ + + +++ L ++M +PN I +N +I LV
Sbjct: 812 LFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLV 871
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
++ ++ + + + PT TY L+ G K+G LE A ++ + M+ G P+
Sbjct: 872 KSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNA 931
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
YN F K G V A L+++M+ G PD +Y L+ LC+ ++D A+ +++
Sbjct: 932 IYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKL 991
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
K G +D ++I L R ++ +EA +++M RG+ P T+ L GM
Sbjct: 992 KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMV 1051
Query: 371 ALAQKL 376
A KL
Sbjct: 1052 EQAGKL 1057
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 172/412 (41%), Gaps = 47/412 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A + D A L + PD V T++ ++ +++ G + EF +
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRV---TYITMLDKFSDCGDLGRVK---EFWS 358
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGW 119
++ + F IL+++LCK G + E FH + Q P + YN L++G
Sbjct: 359 EME-ADGYAPDVITFTILVNALCKAGNI---DEAFHLLDVMRKQGVLPNLHTYNTLISGL 414
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + DA + M V P TY ++ Y + R D+A+ ++M+ GI PN
Sbjct: 415 LRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNI 474
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ N + L E GR E + R P VTY ++K Y KAG ++ A ++L
Sbjct: 475 VACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSD 534
Query: 240 MISRG-----------------------------------FLPSPTTYNYFFRYFSKFGK 264
M P+ TYN K G+
Sbjct: 535 MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQ 594
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
V+ AM L+ M +G P+ +T++ +L LCK D++DLA+++ +M C D+ T
Sbjct: 595 VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+IH L + +A F M ++ L P +T L K G+ A K+
Sbjct: 655 IIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKI 705
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y I + R+ + +A R M + P+VVTY L++ C ++D A+ L
Sbjct: 262 PNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMEL 321
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+M+ +P+ + Y T++D + G V P ++T+T LV CK
Sbjct: 322 FVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCK 381
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG+++ A +L +M +G LP+ TYN + +++DA++L+ M G P T
Sbjct: 382 AGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYT 441
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y + + K + D A++ ++MK RG ++ ++ L M + EA F +
Sbjct: 442 YILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLK 501
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
GL P +T+ + + K G A +L + MS
Sbjct: 502 SNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS 536
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 127/259 (49%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
+ AP V YN+LL+ +S + + + +M + PN +T+ ++ + +D
Sbjct: 818 NAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLD 877
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+A+ L ++ P Y ++DGL+++GR EE + E + P Y L+
Sbjct: 878 KALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILI 937
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G+ K GD+ A ++ K M+ G P +Y + G+V+DA++ + K+ ++G
Sbjct: 938 NGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY 997
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
D + Y++++ L + +++ A+ + EM+ RG + DL T LI L ++A
Sbjct: 998 LDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKL 1057
Query: 342 FEDMIRRGLVPHYLTFKRL 360
+E++ GL P+ T+ L
Sbjct: 1058 YEELQFIGLEPNVFTYNAL 1076
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+ L +G ++ F K +E + YN L++ +S ++A +
Sbjct: 162 YLIIFKGLFIRGGLRQTPFAFGKMRE--AGFHLNAYSYNGLIHLLLQSGLCREALEMYRR 219
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M E + P++ T+ L+ + R + L++EM G++PN Y I L AGR
Sbjct: 220 MVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGR 279
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E +M+R GP +VTYT L+ C AG L+ A ++ M + P TY
Sbjct: 280 IDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYIT 339
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
FS G + + +M GY PD +T+ IL+ LCK +D A + M+ +G
Sbjct: 340 MLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQG 399
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+L T LI L R+ + D+A F +M G+VP T+ D + K G
Sbjct: 400 VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSG 453
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 8/254 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T I+I ++ ++ A+ F D+V +F + LLD L K GR++ A E
Sbjct: 862 THNIIIANLVKSNSLDKALDLF-----YDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKE 916
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F + +D P +YNIL+NG+ ++ +V A + M +E + P++ +Y +LV
Sbjct: 917 LFEEM--VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGC 974
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C RVD A+ +++++ G+ ++I YN +IDGL + R EE + + P
Sbjct: 975 LCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPD 1034
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TY SL+ AG +E A K+ + + G P+ TYN R +S G + A +Y+
Sbjct: 1035 LFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYK 1094
Query: 274 KMIESGYTPDRLTY 287
+M+ G +P+ T+
Sbjct: 1095 RMMVGGCSPNTGTF 1108
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +LLD+ K G++ E + + + S P +NI++ +S ++ A + +
Sbjct: 828 YNLLLDAHGKSGKINELFELYEQM--ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYD 885
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + +P TYG L++G + R++ A L +EM G PN +YN +I+G + G
Sbjct: 886 LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +R + P + +YTSLV C+AG ++ A + + G YN
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ ++E+A+ LY +M G PD TY+ L+ L ++ A ++ +E++ G
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ ++ T LI D A A ++ M+ G P+ TF +L
Sbjct: 1066 LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 171/416 (41%), Gaps = 53/416 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K +KA + D A LL D PD + ++ LI +AG V+ A F
Sbjct: 515 MMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS---LINTLYKAGRVDEAWKMFCRLK 571
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + + + L+ L K+G+V+ A E F P +N +L+
Sbjct: 572 DMKLAPTVVT----YNTLIAGLGKEGQVQRAMELFASMT--GNGCPPNTITFNTILDCLC 625
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ V A + +M N P+V+T+ T++ G +RV AI L +M+K + P+ +
Sbjct: 626 KNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCV 684
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL---------------------------------- 206
T++ G+V+ G E+ + E F+
Sbjct: 685 TLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDR 744
Query: 207 -----VCEPGPTMVTYTSLVKGYCKAGD-LEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
VC+ G ++ ++K CK L S ++ G P+ +YN+ F
Sbjct: 745 LVCGRVCKDGSVLM---PIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFL 801
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
E A NL+ +M +G PD TY++LL K K++ ++ ++M C C +
Sbjct: 802 GVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTI 861
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T ++I L + D+A F D++ P T+ L D K G A++L
Sbjct: 862 THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE-----GYCRLRRVDRA 163
+ Y I+ G F ++ + +MR+ N +Y L+ G CR A
Sbjct: 159 LNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCR-----EA 213
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ + + M EG++P+ ++ ++ + E V ++E P + TYT ++
Sbjct: 214 LEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRV 273
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+AG ++ A +I+K M G P TY GK++DAM L+ KM S + PD
Sbjct: 274 LGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPD 333
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
R+TY +L L + EM+ G D+ T T+L++ LC+ DEA +
Sbjct: 334 RVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLD 393
Query: 344 DMIRRGLVPHYLTFKRL 360
M ++G++P+ T+ L
Sbjct: 394 VMRKQGVLPNLHTYNTL 410
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 35/188 (18%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY + KG G L M GF + +YN + G +A+ +YR+M
Sbjct: 161 TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRM 220
Query: 276 I----------------------------------ES-GYTPDRLTYHILLKILCKEDKL 300
+ ES G P+ TY I +++L + ++
Sbjct: 221 VLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRI 280
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ K M+ GC D+ T T+LI LC K D+A F M P +T+ +
Sbjct: 281 DEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITM 340
Query: 361 NDEFKKRG 368
D+F G
Sbjct: 341 LDKFSDCG 348
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 16/368 (4%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +LIR Y +A + F+ + F + LL ++ K G V A + +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRK----RGFCVSINACNALLGAIVKVGWVDLAWKVY 212
Query: 96 HKRKELDQSWAPTVRVY--NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ +S V VY NI++N + + + + EM ++ V ++VTY TLV
Sbjct: 213 ---EDFVKS-GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNA 268
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YCR V A LV M +G++P YN +I+GL + G +E +++ L P
Sbjct: 269 YCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPN 328
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ ++ C+ D+ A ++ M+ RG +P +++ FS+ G++ A+ +
Sbjct: 329 AATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFE 388
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM G PD + Y IL+ C+ D + A+++ EM RGC +D+ T L++ LCR
Sbjct: 389 KMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGK 448
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVPRSM 387
D+A F++M+ RG+ P + T L + K G A L M+ V
Sbjct: 449 MLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYN 508
Query: 388 ELLDSRCK 395
L+D CK
Sbjct: 509 TLMDGFCK 516
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 9/334 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD +S F ++ ++R G + A+ FE + +V + ++ IL++ C+
Sbjct: 361 VPDLIS---FSSIVGVFSRNGELGRALAYFEKMKGVGLVPD----TVIYTILINGYCRND 413
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A + + + +++ V YN LLNG R K + DA+ + EM + V P+ T
Sbjct: 414 DVSGALKM--RNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT 471
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
TL+ GYC+ + +A+ L + M ++P+ + YNT++DG + G E+ + +
Sbjct: 472 LTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 531
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E P+ ++++ L+ G+C G + A ++ M +G P+ T N + + + G +
Sbjct: 532 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 591
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + MI G PD +TY+ L+ KE+ D A + M+ RG +L T ++
Sbjct: 592 KANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAIL 651
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
R + EA MI +G+ P T+ L
Sbjct: 652 GGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSL 685
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 144/306 (47%), Gaps = 2/306 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F ++ + G + A YF K K + P +Y IL+NG+ R+ +V A + E
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGV--GLVPDTVIYTILINGYCRNDDVSGALKMRNE 424
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +VVTY TL+ G CR + +D A L KEM + G+ P+ T+I G + G
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 484
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + E + P +VTY +L+ G+CK G++E A ++ MISR PS +++
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F G V +A L+ +M E G P +T + ++K + L A M G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T LI+ + FD A +M RGL+P+ +T+ + F + G A+
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAE 664
Query: 375 KLCNVM 380
+ + M
Sbjct: 665 MVLHKM 670
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 2/237 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ CK G + A F +S P V YN L++G+ + ++ A+ W +M
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTL--RSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ P+ +++ L+ G+C L V A RL EM+++GI+P + NT+I G + AG +
Sbjct: 533 REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSK 592
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P +TY +L+ + K + + A ++ M RG LP+ TYN
Sbjct: 593 ANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILG 652
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
FS+ G++++A + KMI+ G PD+ TY L+ +D + A +V EM RG
Sbjct: 653 GFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 146/307 (47%), Gaps = 4/307 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+++ C++G V SE F + + P + YN L+NG + + + A+R
Sbjct: 262 YNTLVNAYCRRGLV---SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLD 318
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + PN T+ ++ CR V A R+ EM + G+ P+ I +++++ G
Sbjct: 319 EMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNG 378
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
E+ P V YT L+ GYC+ D+ GA K+ M+ RG + TYN
Sbjct: 379 ELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYN 438
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ ++DA L+++M+E G PD T L+ CK+ + A+ + + M R
Sbjct: 439 TLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLR 498
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D+ T L+ C++ + ++A + DMI R + P Y++F L + F G+ + A
Sbjct: 499 SLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEA 558
Query: 374 QKLCNVM 380
+L + M
Sbjct: 559 FRLWDEM 565
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 142/287 (49%), Gaps = 17/287 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L + K D A L + + PDF T LI Y + G + A+ FE
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFPDFY---TLTTLIHGYCKDGNMTKALSLFETMT 496
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + L+D CK G ++ A E ++ + + P+ ++IL+NG+
Sbjct: 497 ----LRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDM--ISREIFPSYISFSILINGFC 550
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
V +A R W EM+++ + P +VT T+++GY R + +A + M EG+ P+ I
Sbjct: 551 SLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCI 610
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
YNT+I+ V+ F+ ++ M ER L+ P +VTY +++ G+ + G ++ A +
Sbjct: 611 TYNTLINSFVKEENFDRAFFLINNMEERGLL----PNLVTYNAILGGFSRHGRMQEAEMV 666
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
L MI +G P +TY + +++A ++ +M++ G+ PD
Sbjct: 667 LHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 178/385 (46%), Gaps = 15/385 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K + D+ L + D V+ +T L+ Y R G+V A +
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNT---LVNAYCRRGLVSEAFGLVDCMA 286
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K G + L++ LCK+G + A + L P +N +L
Sbjct: 287 G----KGLKPGLFTYNALINGLCKEGSYERAKRVLDEM--LGVGLCPNAATFNPMLVESC 340
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R ++V +AER + EM + V P+++++ ++V + R + RA+ ++M+ G+ P+ +
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400
Query: 181 VYNTVIDGLVEAGRFEEVSGMME-RFLVCEPGPTM--VTYTSLVKGYCKAGDLEGASKIL 237
+Y +I+G R ++VSG ++ R + E G M VTY +L+ G C+ L+ A ++
Sbjct: 401 IYTILINGYC---RNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M+ RG P T + K G + A++L+ M PD +TY+ L+ CK
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKV 517
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+++ A ++ +M R + ++LI+ C + EA +++M +G+ P +T
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS 382
+ + + G + A N M S
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMIS 602
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 116/285 (40%), Gaps = 20/285 (7%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEM-RKENVT-------------------PN 143
S +P + L++ +SK + +A+ L + RK V+ N
Sbjct: 94 STSPNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQN 153
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VV + L+ Y + R++ + +RK G + N ++ +V+ G + + E
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
F+ + T +V CK G L+ L M +G TYN + + G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
V +A L M G P TY+ L+ LCKE + A +V EM G + T
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ CR EA F +M++RG+VP ++F + F + G
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNG 378
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 22/229 (9%)
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT---------------------M 214
PN + T+I LV++ + E ++ R ++ + G + +
Sbjct: 96 SPNPSIIATLIHFLVQSKKLPEAQSLLLR-IIRKSGVSHVEVIDSLISTSSSNLNSNQNV 154
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V + L++ Y +A L S+ +++ RGF S N K G V+ A +Y
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
++SG + T +I++ LCK+ KLD EM+ +G DL T L++ CR
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
EA + M +GL P T+ L + K G A+++ + M V
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGV 323
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 170/373 (45%), Gaps = 40/373 (10%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V T + + A+ G+ EAA+ E ++ + + F L+ LC G
Sbjct: 209 VPDAVLYQTVIHAL--VAQGGVAEAAMLLDEM-----LLMGCAADVNTFNDLVLGLCGLG 261
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT----- 141
RV+ A+ + + Q P+V Y LL G R++ +A + + NV
Sbjct: 262 RVREAARLVDRM--MTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTV 319
Query: 142 --------------------------PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
P+V TY L+ G C+L R A+R++ EM ++G
Sbjct: 320 IRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGC 379
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
PN + Y+T++ G +++ M+++ L Y ++ CK G L+ A++
Sbjct: 380 APNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATR 439
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+++ M S+G P TYN + +E+A +++R +IE G + +TY+ L+ L
Sbjct: 440 LVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALL 499
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ + ++++ EM GC +D+ + LI LC+ D + A E+M+ +G+ P+
Sbjct: 500 RNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNF 559
Query: 356 TFKRLNDEFKKRG 368
++ L +E K G
Sbjct: 560 SYNMLINELCKAG 572
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 37/328 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ LCK GR +A + +E + AP + Y+ LL+ + R+ DA +
Sbjct: 351 YSILMHGLCKLGRFGSAVRMLDEMEE--KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQ 408
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP----------------- 177
M + + N Y ++ C+ ++D+A RLV+EM+ +G +P
Sbjct: 409 MLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDL 468
Query: 178 ------------------NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
N I YNT+I L+ GR++E + L+ +++Y
Sbjct: 469 MEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNG 528
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+K CK G+++ + +L+ M+++G P+ +YN K GKV DA+ L ++M+ G
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
TPD +TY+ L+ LCK A+ + +++ D+ T +LI C++ D+A+
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ I G+VP+ T+ + F ++
Sbjct: 649 MLLDKAISGGIVPNERTWGMMVQNFVRQ 676
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 136/264 (51%), Gaps = 4/264 (1%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+P+ R YN++L+ R+ DA + M ++ V P T+G CRL R A+
Sbjct: 139 SPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALA 198
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L++ M + G P+A++Y TVI LV G E + +++ L+ + T+ LV G C
Sbjct: 199 LLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLC 258
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G + A++++ M+++G +PS TY + + + + ++A + ++ E + +
Sbjct: 259 GLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVV 314
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+ +++ E KL A ++ + M +GC D+ T ++L+H LC++ +F A ++M
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGM 369
+G P+ +T+ L F + GM
Sbjct: 375 EEKGCAPNIVTYSTLLHSFCRNGM 398
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
P+ V T+ L+ + R GM + A + + K F + + ++ +LCK G
Sbjct: 380 APNIV---TYSTLLHSFCRNGMWDDARAMLDQM----LAKGFSMNSQGYNGIIYALCKDG 432
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ A+ + K Q P + YN ++ + +++AE + + +E V N +T
Sbjct: 433 KLDQATRLVQEMKS--QGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGIT 490
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ R R +RL EM G + + I YN +I L + G + ++E +
Sbjct: 491 YNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV 550
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +Y L+ CKAG + A ++ K M+++G P TYN K G
Sbjct: 551 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
A+NL K+ PD +TY+IL+ CK LD
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 645
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 162 RAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
RA+ L+ +M R+ + P+ YN V+ L A + + R L PT T+
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ C+ G A +L+ M G +P Y G V +A L +M+ G
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
D T++ L+ LC ++ A ++ M +GC + T L+ LCR + DEA A
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 14/385 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +L KAK++D ++++ G ++ V+ +T ++RR+A AG E A+ F+
Sbjct: 128 VDILGKAKKWDRM-KEFVERMRGDKL---VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ KN +S +LLD+LCK+ RV+ A +L P +NI ++GW +
Sbjct: 184 FGLEKNTES----MNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCK 236
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ V++A EM+ P V++Y T++ YC+ + ++ EM G PN+I
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM-M 240
Y T++ L FEE + R P + Y L+ +AG LE A ++ ++ M
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY-TPDRLTYHILLKILCKEDK 299
G + +TYN + + + A+ L ++M S PD TY LL+ K
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 300 LDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ ++ KEM + +D T T LI LCR + A FE+MI + + P + T
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 476
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
L +E KK+ M A+++ ++M +V
Sbjct: 477 LLLEEVKKKNMHESAERIEHIMKTV 501
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 6/345 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+ V+Y TL+ GY
Sbjct: 131 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + LV P V
Sbjct: 189 RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 SRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+ YN L+NG+ R + + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G + ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G + D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G+++ F + + + + +L++ L K+ +
Sbjct: 175 PSAVSYNT---LMNGYIRLGVLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLSKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A E F + L + P + L++G ++ V A + +M +++ P+++TY
Sbjct: 228 MDDADELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ +M ++G++P+ I Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 346 ENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 406 GSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 138/301 (45%), Gaps = 4/301 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F SL ++++ ++G+ +AS F E + + V++ L+ + S ++D
Sbjct: 35 FSEAKSLLQVVVS---RKGK-GSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRD 90
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + R+ + T ++E +L+ +E+ + G + +N ++
Sbjct: 91 AIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMH 150
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
+ G + + P+ V+Y +L+ GY + G L+ ++ M++ G P
Sbjct: 151 RFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQP 210
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TY+ SK K++DA L+ +M+ G P+ +T+ L+ CK ++DLA+++
Sbjct: 211 DVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 270
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
K+M + DL T LI+ LC+ +A +DM R+GL P +T+ L D K
Sbjct: 271 KQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKE 330
Query: 368 G 368
G
Sbjct: 331 G 331
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + +A E H+++ + ++ VY L++G + DAE+ E
Sbjct: 320 YTTLIDGCCKEGDLDSAFE--HRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 377
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 378 MLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 57 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLRYFKLVWGFY 112
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 113 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G + A L +M
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEM 290
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T +I LC+ +
Sbjct: 291 SMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRP 350
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 351 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 396
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 182 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 241
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL A ++ M +G P T
Sbjct: 242 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFT 301
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y ++ LC+E + A ++ +EM
Sbjct: 302 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREML 361
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP T+ L
Sbjct: 362 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVL 410
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 10/281 (3%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE--ILLDSLCKQGRVKAASE 93
F IL+ R+ + G + A F+ + + S +L I L L + R+K+A
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM- 185
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
L P V Y++L+NG + + DA + EM + + PN VT+ TL++G
Sbjct: 186 -------LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 238
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C+ RVD A+ + K+M + + P+ I YNT+I GL + G + G+++ + P
Sbjct: 239 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPD 298
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
TYT+L+ G CK GDL+ A + K MI Y + G+ DA + R
Sbjct: 299 KFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLR 358
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+M+ G PD TY +++ CK+ + ++ KEM+ G
Sbjct: 359 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 399
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 148/326 (45%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ S +F L+ + + G ++ A E + +E + W P +L +
Sbjct: 40 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRKVLEH 98
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ + K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 99 -LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRP 157
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G +E + L P + TY+ L+ G CK ++ A+++
Sbjct: 158 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 217
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+
Sbjct: 218 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 277
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A + EM +G D T T LI C+ D A + MI+ + + +
Sbjct: 278 GDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAY 337
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
+ + G A+K+ M SV
Sbjct: 338 TAIISGLCQEGRPVDAEKMLREMLSV 363
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%)
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+AS F E + + V++ L+ + S ++DA + R+ + T
Sbjct: 35 SASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRK 94
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++E +LR +E+ + G + +N ++ + G + +
Sbjct: 95 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 154
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P++V+Y +L+ GY + GDL+ ++ M++ G P TY+ K K++DA
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 214
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ G P+ +T+ L+ CK ++DLA+++ K+M + DL T LI+ L
Sbjct: 215 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 274
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ ++A ++M +GL P T+ L D K G
Sbjct: 275 CKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEG 313
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + AA E H+++ + ++ Y +++G + DAE+ E
Sbjct: 302 YTTLIDGCCKEGDLDAAFE--HRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLRE 359
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM++ G P+ YN +++G
Sbjct: 360 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 157/342 (45%), Gaps = 9/342 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP VS +T + + R I E K + + + +DSLC+
Sbjct: 207 VPTIVSYNTLLSWCCKKGRFKFALVLIHHME-------CKGIQADVCTYNMFIDSLCRNS 259
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R +A Y +K ++ P YN L+NG+ + + A R + EM + N++PN++T
Sbjct: 260 R--SAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLIT 317
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ GYC + A+R++ M + PN + T+++GL ++ +F+ ++ER+
Sbjct: 318 YNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYC 377
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ +++T ++ G C+ G L+ A ++L M G P T++ F K G +
Sbjct: 378 INRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNIN 437
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + K+ G+ P+ + + L+ CK + A++ M G + D T L+
Sbjct: 438 KAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLV 497
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LC K EA + R GLVP+ +TF + + + G
Sbjct: 498 ASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 159/357 (44%), Gaps = 33/357 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFE-----------FANNL---DMVKNFDS---------- 70
F +LIR Y R GMV A+ TF + N+ MVKN +
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166
Query: 71 -------GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
S F IL+ LC QG++K A + + PT+ YN LL+ +
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMER--NGYVPTIVSYNTLLSWCCKKG 224
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
K A M + + +V TY ++ CR R + ++K+MR + I PN + YN
Sbjct: 225 RFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYN 284
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T+I+G V+ G+ + + + P ++TY L+ GYC G+ E A ++L +M +
Sbjct: 285 TLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEAN 344
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
P+ T K K + A N+ + + + + +++ +++ LC+ LD A
Sbjct: 345 DVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEA 404
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
Q+ EM G D+ T ++LI+ C++ ++A + R G VP+ + F L
Sbjct: 405 FQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTL 461
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 165/385 (42%), Gaps = 44/385 (11%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI--LLDSLCK 84
VP+ V TF +I YA G A F D + + S F LL LCK
Sbjct: 522 VPNSV---TFDCIINGYANVGDGSGAFSVF------DRMISCGHHPSPFTYGSLLKVLCK 572
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRV----YNILLNGWFRSKNVKDAERFWLEMRKENV 140
++ RK L + + V YN L+ +S N+ +A R + EM + N+
Sbjct: 573 ------GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNI 626
Query: 141 TPNVVTYGTLVEGYCRLRRVDRA-IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
P+ TY ++ G R R+ A I L + M+KE + N+IVY IDGL +AG+ +
Sbjct: 627 LPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAAL 686
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
+ + ++ S+ GY + G + AS ++ ++ +P+ TT+N +
Sbjct: 687 YLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGY 746
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
S+ + LY M SG+ P+RLTYH L+ LC L+L I++ K ID
Sbjct: 747 SRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDD 806
Query: 320 DTSTMLIHLLCRMYKFDEA-------------------SAEFEDMIRRGLVPHYLTFKRL 360
T MLI C + D+ A + ++RR + +Y F
Sbjct: 807 LTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMH- 865
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPR 385
E K+G +++ C +M + R
Sbjct: 866 --EMLKKGFIPTSKQYCTMMKRMCR 888
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 3/303 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L++ CK G + A E K + + P +++ L+ + NV +A +F+
Sbjct: 423 FSVLINGFCKVGNINKAKEVMSKIYR--EGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAA 480
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + T +LV C ++ A + + + G+ PN++ ++ +I+G G
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGD 540
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +R + C P+ TY SL+K CK + A K+LK + +YN
Sbjct: 541 GSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNT 600
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA-IQVSKEMKCR 313
SK G + +A+ L+ +MI++ PD TY +L L +E +L A I + + M+
Sbjct: 601 LIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKE 660
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
++ T I L + + A F++M +GL + + D + + G A
Sbjct: 661 ILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSA 720
Query: 374 QKL 376
L
Sbjct: 721 SSL 723
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 175/406 (43%), Gaps = 51/406 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++KVL K + F A LL K+ H +P V ++ LI +++G + A+ FE
Sbjct: 566 LLKVLCKGQNFWEAR-KLLKKL--HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE--- 619
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M++N + + +L L ++GR+ A + + + + ++ VY ++G
Sbjct: 620 --EMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSI-VYTCFIDGL 676
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F++ K A + EM ++ ++ +++ ++ +GY R+ +V A L+ + R + + PN
Sbjct: 677 FKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNL 736
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERF-LVCEPG--PTMVTYTSLVKGYCKAGDLEGASKI 236
+N ++ G R +++ + + L+ G P +TY SL+ G C G LE K+
Sbjct: 737 TTFNILLHGY---SRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------------------- 271
LKM I+ T+N R + ++ ++L
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853
Query: 272 ----------YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
+M++ G+ P Y ++K +C+ + A ++ +M G +D
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
++ L K +EA + M+R +P TF L F K+
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKK 959
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 159/385 (41%), Gaps = 84/385 (21%)
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC----KQGRVKAASEYFHKRKE 100
+AG +AA++ F+ + G SL I L+S+ + G+V +AS K +
Sbjct: 678 KAGQSKAALYLFKEME--------EKGLSLDLIALNSITDGYSRMGKVFSASSLISKTR- 728
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
+++ P + +NILL+G+ R +++ + + MR+ PN +TY +L+ G C +
Sbjct: 729 -NKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGML 787
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVC--------- 208
+ I+++K E + + +N +I E ++V + ME F V
Sbjct: 788 ELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAV 847
Query: 209 ---------------------EPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ G PT Y +++K C+ GD++GA K+ M++ G
Sbjct: 848 TDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGI 907
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED------- 298
R + GK+E+AM + ++M+ P T+ L+ + CK+D
Sbjct: 908 SLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHN 967
Query: 299 ----------KLDL------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
KLD+ A+ +E+K +G ++ T +L+ +
Sbjct: 968 LKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIS 1027
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYL 355
+ +D+ RGLV YL
Sbjct: 1028 TKHYVSRGEIVLKDLNDRGLVSGYL 1052
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%)
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
+ N + L+ Y R V A+ M G +P+ N ++ +V+ R V
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ L P + ++ L+ C G L+ A IL MM G++P+ +YN +
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G+ + A+ L M G D TY++ + LC+ + V K+M+ + +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ LI+ + K A+ F +MI L P+ +T+ L + + G A ++ +VM
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341
Query: 381 SS 382
+
Sbjct: 342 EA 343
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 10/271 (3%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V+++L+ + R V A + M P+V T ++ + R K+M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPG--PTMVTYTSLVKGYC 225
+ PN +N +I L G+ ++ + MMER G PT+V+Y +L+ C
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMER-----NGYVPTIVSYNTLLSWCC 221
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G + A ++ M +G TYN F + + + +KM TP+ +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y+ L+ KE K+ +A +V EM +L T +LI+ C F+EA + M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ P+ +T L + K +A+ +
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%)
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
N V++ +I + G L+ P++ T ++ K
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
K M++ P+ +++N GK++ A+N+ M +GY P ++Y+ LL C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ + A+ + M+C+G D+ T M I LCR + + + M + + P+ +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
++ L + F K G +A ++ N M + S L+
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLI 316
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF--- 95
++R A G +E A+W + + + S F L+ CK+ K A
Sbjct: 917 MVRGLALCGKIEEAMWILQRMLRMKKIPT----TSTFTTLMHVFCKKDNFKEAHNLKILM 972
Query: 96 -HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H R +LD + YN+L++ + +V A F+ E++++ + PN+ TY LV
Sbjct: 973 EHYRVKLD------IVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026
Query: 155 CRLRRVDRAIRLVKEMRKEGI 175
V R ++K++ G+
Sbjct: 1027 STKHYVSRGEIVLKDLNDRGL 1047
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKA 90
+ + +++R R G ++ A F+ + + + + D A + +LC G+++
Sbjct: 875 TSKQYCTMMKRMCRVGDIQGA---FKLKDQMVALGISLDDAAECAMVRGLALC--GKIEE 929
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + + + PT + L++ + + N K+A + M V ++V Y L
Sbjct: 930 AMWILQRMLRMKK--IPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVL 987
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ C V A+ +E++++G+ PN Y ++ +
Sbjct: 988 ISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 170/366 (46%), Gaps = 24/366 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD K T+ ++ A AG V+ A+ +MV + A F +L ++ + G
Sbjct: 311 VPD---KFTYSTVVSALADAGRVDDAVALVH-----EMVVDGVVAAEAFNPVLGAMLRTG 362
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A++ F + + AP+ YN+LL+G K A M + V P V+T
Sbjct: 363 DVTGAAKLFSFMQL--KGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMT 420
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
YG +V+G R R++ A ++++EMR +G+ PN V++ VI G + G + S + + +
Sbjct: 421 YGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMV 480
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +V Y++++ G + G + A + + MI +P+ TY+ R + + G
Sbjct: 481 AAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSS 540
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A++ + M+ G TP+ +TY +L+ LC + A+ V K M RGC D T +I
Sbjct: 541 QALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMI 600
Query: 327 HLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
C D F DM+ RG P + + L D + +PR
Sbjct: 601 KGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLR-------------AKDLPR 647
Query: 386 SMELLD 391
+M+LL+
Sbjct: 648 AMDLLN 653
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 151/357 (42%), Gaps = 46/357 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LA A D A L+ + + V V+ + F ++ R G V A F F
Sbjct: 320 VVSALADAGRVDDAVALVHEMV----VDGVVAAEAFNPVLGAMLRTGDVTGAAKLFSFMQ 375
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+K A+ + +LL L GR KAA + + + P V Y +++G
Sbjct: 376 ----LKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEV--VPGVMTYGAVVDGLV 429
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R ++DA + EMR + + PN + ++ G+C+L VDRA R+ M GI+PN +
Sbjct: 430 RCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVV 489
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL--VCEPG--------------------------- 211
+Y+ +IDGL G+ E + + C P
Sbjct: 490 LYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDM 549
Query: 212 ------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P VTY+ L+ G C G + A + K M+ RG +P Y + F G V
Sbjct: 550 LRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMV 609
Query: 266 EDAMNLYRKMIESGYT-PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
+ + L+ M+ G T PD + Y++LL L + L A+ + +M + CD D T
Sbjct: 610 DAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVT 666
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++ R G +E A E + +V N +F ++ CK G V AS
Sbjct: 420 TYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPN----EFVFSPVITGFCKLGEVDRASRV 475
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + P V +Y+ +++G R + +AE + EM + PN++TY ++V GY
Sbjct: 476 WDTM--VAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGY 533
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
++ +A+ ++M + G PNA+ Y+ +I+GL GR ++ + + L P
Sbjct: 534 FQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDT 593
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRG-FLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ YTS++KG+C +G ++ ++ M++RG P YN + + AM+L
Sbjct: 594 IAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLN 653
Query: 274 KMIESGYTPDRLTYHILLK 292
+M++ PD +T + L+
Sbjct: 654 QMLDQACDPDTVTCNTFLR 672
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 139/317 (43%), Gaps = 56/317 (17%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV---------TPNVVTYGTLVEGYCR 156
APT+ +N+LL S V + +LE+ V P+ TY T+V
Sbjct: 268 APTLLSFNLLLK-CVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326
Query: 157 LRRVDRAIRLVKEMRKEGI----------------------------------EPNAIVY 182
RVD A+ LV EM +G+ P+A Y
Sbjct: 327 AGRVDDAVALVHEMVVDGVVAAEAFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATY 386
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N ++ GL+ GR + G+M R E P ++TY ++V G + G LE A K+++ M S
Sbjct: 387 NVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRS 446
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+G +P+ ++ F K G+V+ A ++ M+ +G P+ + Y ++ L + K+
Sbjct: 447 KGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTE 506
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A + +EM C ++ T + ++ ++ +A + +EDM+R G P+ +T+
Sbjct: 507 AELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTY----- 561
Query: 363 EFKKRGMTALAQKLCNV 379
+ L LCNV
Sbjct: 562 -------SVLINGLCNV 571
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 9/180 (5%)
Query: 211 GPTMVTYTSLVKGYCKAGD-------LEGASKILKMMISR-GFLPSPTTYNYFFRYFSKF 262
PT++++ L+K C + LE A +++ I +P TY+ +
Sbjct: 268 APTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALADA 327
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+V+DA+ L +M+ G ++ +L + + + A ++ M+ +GC T
Sbjct: 328 GRVDDAVALVHEMVVDGVVAAE-AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATY 386
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+L+H L + A M R +VP +T+ + D + G A K+ M S
Sbjct: 387 NVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRS 446
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 171/353 (48%), Gaps = 11/353 (3%)
Query: 25 HEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLC 83
H VPD S ++ L+ + G VE A ++ +MV +N + I++ LC
Sbjct: 132 HCVPDVFSCNS---LLNVLVKHGKVEIACKVYD-----EMVDRNGEVDNYTVCIMVKGLC 183
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+G+V+ + KR + P + YN L++G+ + + + A + E++ + P
Sbjct: 184 KEGKVEDGWKLIEKR--WGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPT 241
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V TYG ++ G+C+ + + +L+ EM + G++ + +YN +ID + G E + +
Sbjct: 242 VKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVG 301
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P M TY L+ G C G++ A ++L+ I RG LP+ +Y + K G
Sbjct: 302 WMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQG 361
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ A++L KM E G+ PD +TY L+ L ++D+A+ V +M +G D +
Sbjct: 362 EYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYN 421
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+L+ LC+ + A +M+ + + P L D F + G A+KL
Sbjct: 422 VLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKL 474
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
D + + IL+ C G V A + + + + P Y L++ + + A
Sbjct: 309 DPDMATYNILITGSCSCGEVHKAEQLL--EQAIKRGLLPNKVSYTPLIHNYCKQGEYLRA 366
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++M + P++VTY L+ G VD A+ + +M ++G+ P+A +YN ++ G
Sbjct: 367 LDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSG 426
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
L + GR ++ L P +LV G+ + GD E A K+ ++ I +G P
Sbjct: 427 LCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPG 486
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
YN + + KFG ++DA+ +++MI+ ++PD TY ++ K + L A+++
Sbjct: 487 VVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFG 546
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M C ++ T T+LI+ C + A F+ M+ L P+ +T+ L
Sbjct: 547 LMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTIL 598
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 16/289 (5%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
GH+ PD V T+ LI AG V+ A+ N + K A+++ +L+ LC
Sbjct: 377 GHK-PDLV---TYAALIHGLIVAGEVDVALTV----RNKMVEKGVLPDANIYNVLMSGLC 428
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+GR+ AA + LDQ+ AP + L++G+ R + ++A++ + ++ + P
Sbjct: 429 KKGRLPAAKVLLAEM--LDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPG 486
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VV Y +++GYC+ + A+ K M + P+ Y+T+IDG + + ++ G +
Sbjct: 487 VVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYI---KMNDLHGALR 543
Query: 204 RFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
F + G P +VTYT L+ G+C +GD+ A K K M+S P+ TY F
Sbjct: 544 MFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFC 603
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
K + A + + +M+ P+ +TY+ L+ L ++ Q S++
Sbjct: 604 KGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQ 652
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 13/335 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD T+ ILI G V A E A ++ N S + L+ + CKQG
Sbjct: 310 PDMA---TYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVS----YTPLIHNYCKQGE 362
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A + K E + P + Y L++G + V A +M ++ V P+ Y
Sbjct: 363 YLRALDLLIKMSE--RGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIY 420
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G C+ R+ A L+ EM + + P+A + T++DG + G FEE + E L
Sbjct: 421 NVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFE--LT 478
Query: 208 CEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
E G P +V Y +++KGYCK G ++ A K MI P TY+ + K +
Sbjct: 479 IEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDL 538
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
A+ ++ M++ P+ +TY +L+ C ++ A + K+M ++ T T+L
Sbjct: 539 HGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTIL 598
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
I C+ +A + FE M+ +P+ +T+ L
Sbjct: 599 IGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYL 633
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +++ G V A E++ ++ P V N LLN + V+ A + + E
Sbjct: 104 FSLVISVFADCGLVDRALEFYRTFIKIHHC-VPDVFSCNSLLNVLVKHGKVEIACKVYDE 162
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N + T +V+G C+ +V+ +L+++ G PN + YNT+IDG + G
Sbjct: 163 MVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGD 222
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + + PT+ TY +++ G+CK G E K+L M RG S YN
Sbjct: 223 TERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNN 282
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G +A + MI+SG PD TY+IL+ C ++ A Q+ ++ RG
Sbjct: 283 IIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRG 342
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ + T LIH C+ ++ A M RG P +T+ L
Sbjct: 343 LLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAAL 388
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 20/283 (7%)
Query: 31 VSKDTFVI--LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
V+ D F+ L+ + R G E A FE L + K D G + ++ CK G +
Sbjct: 448 VAPDAFITATLVDGFIRHGDFEEAKKLFE----LTIEKGIDPGVVGYNAMIKGYCKFGMM 503
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
K A F ++ + +P Y+ +++G+ + ++ A R + M K PNVVTY
Sbjct: 504 KDALLCF--KRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYT 561
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ G+C ++RA + K+M ++PN + Y +I + + E+ L+
Sbjct: 562 LLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLME 621
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASK------------ILKMMISRGFLPSPTTYNYFF 256
+ P VTY L+ G D +++ MMIS G+ +YN
Sbjct: 622 KCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSIL 681
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ V+ A++L KM+ G+ PD ++ LL LC E +
Sbjct: 682 ICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGR 724
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 7/266 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
PT ++++++ + V A F+ K + P+V + +L+ + +V+ A +
Sbjct: 99 PTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACK 158
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+ EM E + ++ GL + G+ E+ ++E+ P +V Y +L+ GYC
Sbjct: 159 VYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYC 218
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K GD E A+ + K + +GFLP+ TY F K GK E L +M E G +
Sbjct: 219 KKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLD---V 275
Query: 286 TYHILLKILCKEDKLDLAIQVSKE---MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ HI I+ + K I+ + M GCD D+ T +LI C + +A
Sbjct: 276 SIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLL 335
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRG 368
E I+RGL+P+ +++ L + K+G
Sbjct: 336 EQAIKRGLLPNKVSYTPLIHNYCKQG 361
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS-RGFLPSPTTYN 253
F EV +++ + PT ++ ++ + G ++ A + + I +P + N
Sbjct: 82 FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K GKVE A +Y +M++ D T I++K LCKE K++ ++ ++ R
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGR 201
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
GC ++ LI C+ + A+ F+++ +G +P T+ + + F K+G +
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261
Query: 374 QKLCNVMS 381
KL MS
Sbjct: 262 DKLLVEMS 269
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 151/311 (48%), Gaps = 2/311 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K+F + I++ SLC +G++ A + ++ L + PTV Y IL+ V
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL--LSDNCQPTVITYTILIEATMLEGGV 244
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + EM + P++ TY T++ G C+ VDRA +V+ + +G EP+ I YN +
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNIL 304
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ L+ G++EE +M + + P +VTY+ L+ C+ G +E A +LK+M +G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P +Y+ F + G+++ A+ MI G PD + Y+ +L LCK K D A++
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ ++ GC + + + L A +M+ G+ P +T+ +
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 366 KRGMTALAQKL 376
+ GM A +L
Sbjct: 485 REGMVDEAFEL 495
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ + P V + L+ G+F +N+ A R +E+ ++ P+V Y L+ G+C++ R+D
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDVFAYNALINGFCKMNRIDD 176
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A R++ MR + P+ + YN +I L G+ + ++ + L PT++TYT L++
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G ++ A K++ M+SRG P TYN R K G V+ A + R + G P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEP 296
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D ++Y+ILL+ L + K + ++ +M CD ++ T ++LI LCR K +EA
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ M +GL P ++ L F + G +A + M S
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L++ P V YN L+NG+ + + DA R MR ++ +P+ VTY ++ C ++
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A++++ ++ + +P I Y +I+ + G +E +M+ L P M TY ++
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
++G CK G ++ A ++++ + +G P +YN R GK E+ L KM
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ +TY IL+ LC++ K++ A+ + K MK +G D + LI CR + D A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E MI G +P + + + K G
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 13/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L + D A +L + + P + T+ ILI G V+ A+ +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVI---TYTILIEATMLEGGVDEALKLMDEM- 254
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + ++ +CK+G V A E + EL S P V YNILL
Sbjct: 255 ---LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV-RNLELKGS-EPDVISYNILLRALL 309
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ E+ +M E PNVVTY L+ CR +++ A+ L+K M+++G+ P+A
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I GR + +E + P +V Y +++ CK G + A +I +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ ++YN F G A+++ +M+ +G PD +TY+ ++ LC+E +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL--CRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ +M R C+ T I LL C+ ++ ++A E M+ G P+ T+
Sbjct: 490 DEAFELLVDM--RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 359 RLNDEFKKRGMTALAQKLCN 378
L + G A A +L N
Sbjct: 548 VLIEGIGFAGYRAEAMELAN 567
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 128/260 (49%), Gaps = 1/260 (0%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS N ++ M ++ P+V+ L++G+ LR + +A+R+++ + K G +P+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I+G + R ++ + +++R + P VTY ++ C G L+ A K+L +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+S P+ TY G V++A+ L +M+ G PD TY+ +++ +CKE +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ + ++ +G + D+ + +L+ L K++E M P+ +T+ L
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+ G A L +M
Sbjct: 340 ITTLCRDGKIEEAMNLLKLM 359
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI R G +E A+ + K A ++ L+ + C++GR+ A E+
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKE----KGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P + YN +L ++ A + ++ + +PN +Y T+
Sbjct: 391 LETM--ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RA+ ++ EM GI+P+ I YN++I L G +E ++ CE P++
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY ++ G+CKA +E A +L+ M+ G P+ TTY G +AM L
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 568
Query: 275 MI 276
++
Sbjct: 569 LV 570
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G ++++L M+ GY PD + L+K + A++V + ++ G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ LI+ C+M + D+A+ + M + P +T+ + RG LA
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 375 KLCNVMSS 382
K+ N + S
Sbjct: 214 KVLNQLLS 221
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLRYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 --EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A L +M
Sbjct: 249 TFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+I G +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + + L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D+ T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVL 428
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L+ G ++ V A + M +++ P+++TY
Sbjct: 228 MDDANELFDEM--LVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 346 GNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M +G+ P +TY++L+
Sbjct: 406 GSKLLKEMQRNGHVPSVVTYNVLM 429
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 148/328 (45%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 58 FATILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRK---V 113
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + + K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 114 LEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G +E + L P + TY+ L+ G CK ++ A++
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 233
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ T+ K G+V+ AM +Y+ M+ PD +TY+ L+ LC
Sbjct: 234 LFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLC 293
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L A + EM +G D T T LI C+ D A + MI+ + +
Sbjct: 294 KKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDV 353
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 354 AYTALISGLCQEGRSVDAEKMLREMLSV 381
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%)
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+AS F E + + V++ L+ + S ++DA + R+ + T
Sbjct: 53 SASAVFATILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRK 112
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++E +LR +E+ + G + +N ++ + G + +
Sbjct: 113 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P++V+Y +L+ GY + GDL+ ++ M++ G P TY+ K K++DA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ G P+ +T+ L+ CK ++DLA+++ K M + DL T LI+ L
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGL 292
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ +A ++M +GL P T+ L D K G
Sbjct: 293 CKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV----YNILLNGWFRSKNVKDAER 130
+ L+D CK+G + A F RK + Q +R+ Y L++G + DAE+
Sbjct: 320 YTTLIDGCCKEGDLDTA---FKHRKRMIQG---NIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
EM + P++ TY ++ +C+ V + +L+KEM++ G P+ + YN +++G
Sbjct: 374 MLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 14/385 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +L KAK++D ++++ G ++ V+ +T ++RR+A AG E A+ F+
Sbjct: 192 VDILGKAKKWDRM-KEFVERMRGDKL---VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 247
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ KN +S +LLD+LCK+ RV+ A +L P +NI ++GW +
Sbjct: 248 FGLEKNTES----MNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCK 300
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ V++A EM+ P V++Y T++ YC+ + ++ EM G PN+I
Sbjct: 301 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 360
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM-M 240
Y T++ L FEE + R P + Y L+ +AG LE A ++ ++ M
Sbjct: 361 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 420
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY-TPDRLTYHILLKILCKEDK 299
G + +TYN + + + A+ L ++M S PD TY LL+ K
Sbjct: 421 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 480
Query: 300 LDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ ++ KEM + +D T T LI LCR + A FE+MI + + P + T
Sbjct: 481 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 540
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
L +E KK+ M A+++ ++M +V
Sbjct: 541 LLLEEVKKKNMHESAERIEHIMKTV 565
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 139/270 (51%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N+L+N + +S A F +M K P++VT+ +L+ G+C R++ A+ +V +M +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GI+P+ ++Y T+ID L + G + ++ P +V YTSLV G C +G
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A +L+ M R P T+N F K GK DA LY +MI P+ TY L+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C E +D A Q+ M+ +GC D+ T LI+ C+ K D+A F +M ++GL
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ +T+ L F + G +AQ++ + M S
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F+ F L++ C R++ A ++ E+ P V +Y +++ ++ +V
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM--GIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + +M + P+VV Y +LV G C R A L++ M K I+P+ I +N +ID
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
V+ G+F + + + P + TYTSL+ G+C G ++ A ++ +M ++G P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
Y F K KV+DAM ++ +M + G T + +TY L++ + K ++A +V
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR---GLVPHYLTFKRL 360
M RG ++ T +L+H LC K +A FEDM +R G+ P+ T+ L
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 16/354 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V + +I + G V A+ F+ N + + ++ L++ LC GR
Sbjct: 175 PDVV---MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD----VVMYTSLVNGLCNSGR 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A R + P V +N L++ + + DAE + EM + ++ PN+ TY
Sbjct: 228 WRDADSLL--RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ G+C VD A ++ M +G P+ + Y ++I+G + + ++ M + +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD--AMKIFYEM 343
Query: 208 CEPGPT--MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ G T +TYT+L++G+ + G A ++ M+SRG P+ TYN GKV
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 266 EDAMNLYRKMIE---SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+ A+ ++ M + G P+ TY++LL LC KL+ A+ V ++M+ R DI + T
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T++I +C+ K A F + +G+ P+ +T+ + + G+ A L
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D+ K+G+ A E +++ + S AP + Y L+NG+ V +A + +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEM--IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VV Y +L+ G+C+ ++VD A+++ EM ++G+ N I Y T+I G + G+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR---GFLPSPTT 251
+ + P + TY L+ C G ++ A I + M R G P+ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN GK+E A+ ++ M + +TY I+++ +CK K+ A+ + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+G ++ T T +I L R EA F M G+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 3/309 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F++ + L K KA S F + +L W Y +L S +A +
Sbjct: 5 FFQLHRNRLVKGNSGKALS--FSRLLDL-SFWVRAFCNYREILRNGLHSLQFNEALDLFT 61
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + P+++ + L+ ++++ D I L ++ G+ + N +++ ++
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ S + + + P +VT+TSL+ G+C +E A ++ M+ G P Y
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G V A++L+ +M G PD + Y L+ LC + A + + M R
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D+ T LI + KF +A + +MIR + P+ T+ L + F G A
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 374 QKLCNVMSS 382
+++ +M +
Sbjct: 302 RQMFYLMET 310
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 40/242 (16%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ C +G V A + F+ + + P V Y L+NG+ + K V DA + + EM +
Sbjct: 288 LINGFCMEGCVDEARQMFYLMET--KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 138 ENVTPNVVTYGTLVEGY-----------------------------------CRLRRVDR 162
+ +T N +TY TL++G+ C +V +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 163 AIRLVKEMRK---EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A+ + ++M+K +G+ PN YN ++ GL G+ E+ + E E ++TYT
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+++G CKAG ++ A + + S+G P+ TY + G +A L+RKM E G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 280 YT 281
+
Sbjct: 526 VS 527
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 42/179 (23%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ + + G A F + + N + + +LL LC G+VK A
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT----YNVLLHCLCYNGKVKKALMI 409
Query: 95 FH--KRKELDQSWAPTVRVYNILLNG---------------------------------- 118
F +++E+D AP + YN+LL+G
Sbjct: 410 FEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 119 -WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
++ VK+A + + + V PNVVTY T++ G R A L ++M+++G+
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 184/361 (50%), Gaps = 22/361 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF ++L ++GR A YF+K L + PT +N+++ G+F
Sbjct: 108 ELGVERTIKSYNALFXVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNVMIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ ++P+VVTY T++ GY R+++++ A + EM+ IEP +
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V + ++ ++E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S G ++ A ++ + MI + Y +L++ CK
Sbjct: 282 MDKYL--APTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKA 339
Query: 298 DKLDLAIQ-----VSKEMKCR-GCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRG 349
+ D A++ + K++ R + L+ S +I LC + +A A +++ G
Sbjct: 340 GQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLG 399
Query: 350 L 350
+
Sbjct: 400 V 400
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAP 288
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMTEARSIL--KEMMDKYLAPTDNSIFMRLISSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 14/293 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRC 394
G+ P+ +T+ L N E + L + + ++ S M L+ S+C
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQC 302
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 181/405 (44%), Gaps = 21/405 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVI--LIRRYARAGMVEAAIWTFEF 58
MIK+L + A + I GH DTF LI + + G ++ A F+
Sbjct: 208 MIKILCNKGKVQEA-----ELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFD- 261
Query: 59 ANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
MVK+ D + + L++ LC +GR++ A + + +D+ PTV Y I +
Sbjct: 262 ----RMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEM--IDKGIEPTVHAYTIPIV 315
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ +A + +M+K PNV TY L+ G R + + AI + +M +G+ P
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
A+ Y+ +I+ L GRFE + E L + P TY ++KG+C G ++ A+ I
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ G P+ TYN + K G + +AM L M +G D TY L+ +
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
KL+ A + EM G ++ T +I+ + K D+A A F M+ G VP T+
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555
Query: 358 KRLNDEFKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
+ F K + A+ C ++ +V +D CK+
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 37/357 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI +R G E AI + + A + L++ L +GR + A
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKM----LADGLVPTAVTYSALINQLYVEGRFETALTI 399
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F L P YN+++ G+ ++ A + +M K +PNV+TY ++ Y
Sbjct: 400 FEWM--LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIY 457
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ ++ A+RL++ M+ G++ + Y +I G G+ E + + P +
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY +++ GY ++ A + M+ G +PS TYN FSK ++ +A N K
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR--------------------- 313
M++ G P+ +TY + LCK + LA ++ EMK R
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637
Query: 314 ----------GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
GC+ ++DT T L+ LC + EA E M ++GL P ++ L
Sbjct: 638 AEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 147/325 (45%), Gaps = 45/325 (13%)
Query: 75 FEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
F ++ LC +G+V+ A FH P Y L+ G ++ N+ A
Sbjct: 205 FNAMIKILCNKGKVQEAELIMGHIFH------YGACPDTFTYTSLIIGHCKNGNLDLAFE 258
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE-------------- 176
+ M K+ PN VTY L+ G C R++ A+ +++EM +GIE
Sbjct: 259 MFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLC 318
Query: 177 ---------------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
PN Y +I GL G+FE G+ + L PT V
Sbjct: 319 DAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAV 378
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY++L+ G E A I + M+S LP+ TYN + F G ++ A ++ +M
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+++G +P+ +TY+I++ I K+ ++ A+++ + MK G +D T LI R K
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
+ A + F +M+ G+ P+ +T+ +
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAI 523
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L+ P + +N ++ V++AE + P+ TY +L+ G+C+ +
Sbjct: 194 LNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNL 253
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A + M K+G +PN++ Y+ +I+GL GR EE M+E + PT+ YT
Sbjct: 254 DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ C AG A K+L M RG P+ TY S+ GK E A+ +Y KM+ G
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P +TY L+ L E + + A+ + + M + +T ++I C + +A+A
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M++ G P+ +T+ + + K+G A +L +M
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM 473
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ L + G+ + A +HK L PT Y+ L+N + + A +
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKM--LADGLVPTAVTYSALINQLYVEGRFETALTIFEW 402
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN TY +++G+C + + +A + +M K G PN I YN +I + G
Sbjct: 403 MLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY 462
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E TY +L+ G+ + G LE A + M+ G P+ TYN
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA 522
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ KV+DA+ L+ KM+ESG P TY++++ K +++ A +M +G
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQG 582
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T T I LC+ + A F +M +R P+ T+ L D + G A+
Sbjct: 583 LLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE 642
Query: 375 KL 376
+L
Sbjct: 643 RL 644
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 43/325 (13%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI ++R G +E A F +MV++ + +++ +V A
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFN-----EMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F K E P+ YN++++G+ ++ + +AE F +M K+ + PNV+TY + ++G
Sbjct: 539 LFWKMVE--SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-- 211
C+ R A ++ EM+K PN Y+++IDGL + G+ E+ +++ CEP
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDG--CEPNVD 654
Query: 212 -------------------------------PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
P+ Y +L+ G CK ++E A KI M
Sbjct: 655 TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
++ GF P + Y K + A +++ M++ + D + + +LL L KE +
Sbjct: 715 VTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGET 774
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTML 325
DL++++ M+ R C ++ T ML
Sbjct: 775 DLSLELLHVMESRNCTLNFQTRVML 799
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 14/350 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEF--ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAAS 92
T+ I+I Y + G + A+ E N L + + L+ + G+++ A
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKL------DTWTYANLISGFSRGGKLEHAF 502
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F++ E +P V YN ++NG+ V DA + +M + P+ TY ++
Sbjct: 503 SLFNEMVE--HGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMIS 560
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G+ + R+ A +M K+G+ PN I Y + IDGL + GR + + P
Sbjct: 561 GFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFP 620
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ TY+SL+ G C+ G E A ++L G P+ TY R G+ +A L
Sbjct: 621 NLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLV 676
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
M + G P Y LL CK +++ A+++ M G L LI LC+
Sbjct: 677 ESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKA 736
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+A F+ M+++ + + L D K G T L+ +L +VM S
Sbjct: 737 NFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMES 786
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%)
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
EM GI PN +N +I L G+ +E +M P TYTSL+ G+CK G
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+L+ A ++ M+ G P+ TY+ G++E+AM++ +MI+ G P Y
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
I + LC + A+++ +MK RGC ++ T T LI L R KF+ A + M+
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371
Query: 349 GLVPHYLTFKRLNDEFKKRG 368
GLVP +T+ L ++ G
Sbjct: 372 GLVPTAVTYSALINQLYVEG 391
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 250 TTYNYFFRYFS------KFGKVE-DAM--NLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
TTY++ + +S + GK + D + ++Y +M+ SG P+ T++ ++KILC + K+
Sbjct: 159 TTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKV 218
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + + G D T T LI C+ D A F+ M++ G P+ +T+ L
Sbjct: 219 QEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSAL 278
Query: 361 NDEFKKRG 368
+ G
Sbjct: 279 INGLCSEG 286
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 127 FFNILMHRFCKDGDIRJAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 182
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ + D A L EM +G+ PN + + T+IDG +
Sbjct: 183 KSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCK 242
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 243 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKIT 302
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC E + A ++ +EM
Sbjct: 303 YTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREML 362
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 363 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 411
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 58 FSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 113
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 114 EEI--LECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+G + + ++ + + + LV P V
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXV 231
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 232 XFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC +
Sbjct: 292 SXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRS 351
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 352 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 397
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ CK+ +
Sbjct: 158 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGXCKESK 210
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 211 XDDANELFDEM--LVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 268
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G + +R +
Sbjct: 269 NTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQ 328
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C G A K+L+ M+S G P TY F K G V
Sbjct: 329 ENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 388
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 389 GSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNILLNGWFRSKNVKDAERF 131
+F L+ + + G ++ A E + E + W P T R +L + K K F
Sbjct: 57 VFSGLITAYLESGFLRDAIECYRLTXE-HKFWVPFDTCRK---VLEHLMKLKYFKLVWGF 112
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 172
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G +E + L P + TY+ L+ G CK + A+++ M+ +G +P+
Sbjct: 173 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVX 232
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 292
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D T T LI C+ D A + MI+ + + L G +
Sbjct: 293 XKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSV 352
Query: 372 LAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 353 DAEKMLREMLSV 364
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 155
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 198
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ C+ K D+A+ F++M+ +GLVP+ + F L D
Sbjct: 199 ------------------SVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 240
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLI 266
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + +A E H ++ + ++ Y L++G DAE+ E
Sbjct: 303 YTTLIDGCCKEGDLDSAFE--HXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLRE 360
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 361 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K+F + I++ SLC +G++ A + + L + PTV Y IL+ V
Sbjct: 183 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL--LSDNCQPTVITYTILIEATMLEGGV 240
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + EM + P++ TY T++ G C+ VDRA +++ + +G EP+ I YN +
Sbjct: 241 DEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ L+ G++EE +M + + P +VTY+ L+ C+ G +E A +LK+M +G
Sbjct: 301 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 360
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P +Y+ F + G+++ A+ MI G PD + Y+ +L LCK K D A++
Sbjct: 361 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 420
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ ++ GC + + + L A +M+ G+ P +T+ +
Sbjct: 421 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLC 480
Query: 366 KRGMTALAQKL 376
+ GM A +L
Sbjct: 481 REGMVDKAFEL 491
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 144/280 (51%), Gaps = 1/280 (0%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ + P V + L+ G+F +NV A R +E+ ++ P+V Y L+ G+C++ R+D
Sbjct: 114 KGYNPDVILCTKLIKGFFTLRNVPKAVRV-MEILEKFGQPDVFAYNALINGFCKMNRIDD 172
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A R++ MR + P+ + YN +I L G+ + ++++ L PT++TYT L++
Sbjct: 173 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIE 232
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G ++ A K+L M+SRG P TYN R K G V+ A + R + G P
Sbjct: 233 ATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEP 292
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D ++Y+ILL+ L + K + ++ +M CD ++ T ++LI LCR K +EA
Sbjct: 293 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 352
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ M +GL P ++ L F + G +A + M S
Sbjct: 353 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 133/268 (49%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L++ P V YN L+NG+ + + DA R MR ++ +P+ VTY ++ C ++
Sbjct: 146 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 205
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A++++ ++ + +P I Y +I+ + G +E +++ L P M TY ++
Sbjct: 206 DLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTI 265
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
++G CK G ++ A ++++ + +G P +YN R GK E+ L KM
Sbjct: 266 IRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ +TY IL+ LC++ K++ A+ + K MK +G D + LI CR + D A
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E MI G +P + + + K G
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNG 413
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 173/380 (45%), Gaps = 13/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L + D A +L + + P + T+ ILI G V+ A+ +
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVI---TYTILIEATMLEGGVDEALKLLDEM- 250
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + ++ +CK+G V A E + EL + P V YNILL
Sbjct: 251 ---LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMI-RNLEL-KGCEPDVISYNILLRALL 305
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ E+ +M E PNVVTY L+ CR +++ A+ L+K M+++G+ P+A
Sbjct: 306 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 365
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I GR + +E + P +V Y +++ CK G + A +I +
Sbjct: 366 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 425
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ ++YN F G A+++ +M+ +G PD +TY+ ++ LC+E +
Sbjct: 426 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMV 485
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL--CRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ +M R C+ T I LL C+ ++ ++A + M+ G P+ T+
Sbjct: 486 DKAFELLVDM--RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYT 543
Query: 359 RLNDEFKKRGMTALAQKLCN 378
L + G A A +L N
Sbjct: 544 VLIEGIGFAGYRAEAMELAN 563
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS N ++ M ++ P+V+ L++G+ LR V +A+R+++ + K G +P+
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVF 155
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I+G + R ++ + +++R + P VTY ++ C G L+ A K+L +
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+S P+ TY G V++A+ L +M+ G PD TY+ +++ +CKE +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ + ++ +GC+ D+ + +L+ L K++E M P+ +T+ L
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+ G A L +M
Sbjct: 336 ITTLCRDGKIEEAMNLLKLM 355
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI R G +E A+ + K A ++ L+ + C++GR+ A E+
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKE----KGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P + YN +L ++ A + ++ + +PN +Y T+
Sbjct: 387 LETM--ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RA+ ++ EM GI+P+ I YN++I L G ++ ++ CE P++
Sbjct: 445 WSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSV 504
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY ++ G+CKA +E A +L M+ G P+ TTY G +AM L
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 564
Query: 275 MI 276
++
Sbjct: 565 LV 566
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 37/327 (11%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
G ++ +++ LCK+ R+K A + F + LD+ AP YN L++G+ + +++A
Sbjct: 216 GVFVYNVVIGGLCKEKRMKDAEKLFDEM--LDRRVAPNRITYNTLIDGYCKVGQLEEAFN 273
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG-- 188
M+ ENV P ++T+ +L+ G CR + ++ A R+++EM G P+ Y T+ DG
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL 333
Query: 189 ---------------------------------LVEAGRFEEVSGMMERFLVCEPGPTMV 215
L + G E+ ++++FL P V
Sbjct: 334 KCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGV 393
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ ++V GYC+ GD+ A ++ M + G P+ TYN + F + +E+A +KM
Sbjct: 394 FFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+E G P+ TY+ L+ + D Q+ +EM+ +G ++ + LI+ LC+
Sbjct: 454 VEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLND 362
EA DM+ RG+VP+ + L D
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLID 540
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 7/348 (2%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
+T+ LI Y R+ + + E + N S + L++ LCK + A
Sbjct: 463 ETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVIS----YGCLINCLCKDANILEAEV 518
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + P ++YN+L++G + +KDA RF+ EM + P +VTY L+ G
Sbjct: 519 ILGDM--VHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C+ +V A L E+ ++G+ + I YN++I G AG ++ + E PT
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ TY L+ G K G L KI + M+ +P YN + + G V+ A +L+
Sbjct: 637 LNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHS 695
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G PD++TY+ L+ KE ++ + +MK RG +T +LI C++
Sbjct: 696 AMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLK 755
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
FD A + +M G P L ++ G + A +C+ M+
Sbjct: 756 DFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMN 803
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 137/261 (52%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+P V VYN+++ G + K +KDAE+ + EM V PN +TY TL++GYC++ +++ A
Sbjct: 214 SPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFN 273
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
+ + M+ E +EP I +N++++GL A EE ++E V P TYT+L G+
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL 333
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G+++ + + + + +G T + K G +E A + +K +E+G P +
Sbjct: 334 KCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGV 393
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
++ ++ C+ ++ A ++M+ G + T L+ C M +EA + M
Sbjct: 394 FFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453
Query: 346 IRRGLVPHYLTFKRLNDEFKK 366
+ +G++P+ T+ L D + +
Sbjct: 454 VEKGVLPNVETYNTLIDGYGR 474
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 39/338 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L+D CK G+++ A F+ R+ + ++ PT+ +N LLNG R++ +++A+R
Sbjct: 255 YNTLIDGYCKVGQLEEA---FNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLE 311
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE----------------- 176
EM P+ TY TL +G+ + VD +I L +E ++G++
Sbjct: 312 EMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEG 371
Query: 177 ------------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
P + +NT+++G + G + +E+ P VTY
Sbjct: 372 NMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYN 431
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SLVK +C+ ++E A K +K M+ +G LP+ TYN + + + + +M +
Sbjct: 432 SLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKK 491
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ ++Y L+ LCK+ + A + +M RG + MLI C K +A
Sbjct: 492 GLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDA 551
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M+ R +VP +T+ L + K+G A+ L
Sbjct: 552 FRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENL 589
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 7/345 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ++ Y + G + A T E + + N + + L+ C+ ++ A +
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVT----YNSLVKKFCEMKNMEEAEKCI 450
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+K +++ P V YN L++G+ RS + EM K+ + PNV++YG L+ C
Sbjct: 451 --KKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLC 508
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + A ++ +M G+ PNA +YN +IDG AG+ ++ + + E PT+V
Sbjct: 509 KDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLV 568
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY L+ G CK G + A + + +G TYN +S G V+ A+ LY M
Sbjct: 569 TYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+SG P TYH L+ C ++ L L ++ +EM D LIH
Sbjct: 629 KKSGIKPTLNTYHRLIA-GCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDV 687
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A + M +G+ P +T+ L K G + L N M
Sbjct: 688 QKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDM 732
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 1/295 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF +L S+C + ++ + S + + D P+V N+ L +K +D + +
Sbjct: 113 LFSDMLLSICSESKMVSESAELYMLMKKD-GVLPSVASLNLFLESLVSTKRYEDTLQLFS 171
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ + + P+ YG ++ +L + RAI L+ M++ G+ P VYN VI GL +
Sbjct: 172 EIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEK 231
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R ++ + + L P +TY +L+ GYCK G LE A I + M P+ T+N
Sbjct: 232 RMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFN 291
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ +E+A + +M G+ PDR TY L K +D +I +S+E +
Sbjct: 292 SLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRK 351
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
G I T ++L++ LC+ ++A + + GL P + F + + + + G
Sbjct: 352 GVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVG 406
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 43/372 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF L+ RA M+E A E V + + +LF+ L + + E
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348
Query: 95 FHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K + LD + + ILLN + N++ AE + + + P V + T+V G
Sbjct: 349 VRKGVQILDYTCS-------ILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNG 401
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
YC++ +++A +++M G+ PN + YN+++ E EE +++ + P
Sbjct: 402 YCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPN 461
Query: 214 MVTYTSLVKGY-----------------------------------CKAGDLEGASKILK 238
+ TY +L+ GY CK ++ A IL
Sbjct: 462 VETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILG 521
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+ RG +P+ YN GK++DA + +M+ P +TY+IL+ LCK+
Sbjct: 522 DMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG 581
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K+ A ++ E+ +G D+ T LI +A +E M + G+ P T+
Sbjct: 582 KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYH 641
Query: 359 RLNDEFKKRGMT 370
RL K G+
Sbjct: 642 RLIAGCGKEGLV 653
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 40/300 (13%)
Query: 63 DMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
DMV + A ++ +L+D C G++K A +F + + + PT+ YNIL+NG +
Sbjct: 522 DMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM--VAREIVPTLVTYNILINGLCK 579
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP---- 177
V +AE E+ ++ ++ +V+TY +L+ GY V +A+ L + M+K GI+P
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNT 639
Query: 178 ------------------------------NAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+ ++YN +I VE G ++ +
Sbjct: 640 YHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEA 699
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +TY L+ G+ K G + ++ M RG +P TY+ K +
Sbjct: 700 QGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDG 759
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG---CDIDLDTSTM 324
A YR+M E+G+TP L+ L +E + A + EM +G C D D S +
Sbjct: 760 AYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKDDCRADEDASAV 819
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 9/314 (2%)
Query: 85 QGRVKAASEYFHKRKE---LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
QG+V+ + + H +K L Q T R L+ K+ + + + T
Sbjct: 52 QGQVQEQARHEHVQKLQTLLQQGRTETARR---LIRSMLLPKSPFSSPSHLYTLFSLSST 108
Query: 142 PNVVTYGTLVEGYC-RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P + ++ C + V + L M+K+G+ P+ N ++ LV R+E+
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ + P Y ++ K GDL+ A +++ M G P YN
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K +++DA L+ +M++ P+R+TY+ L+ CK +L+ A + + MK + +
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T L++ LCR +EA E+M G VP T+ L D K G + L
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSE-- 346
Query: 381 SSVPRSMELLDSRC 394
+V + +++LD C
Sbjct: 347 EAVRKGVQILDYTC 360
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ C +G++ A E F + + + P V Y+I++ G R + +
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVM--VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEH 221
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ P+VV Y T+V+ C+ R V+ A+ + +M+ GI P + Y ++I GL GR
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGR 281
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E G++ P +V ++ L+ CK G++ A ILK M G P TYN
Sbjct: 282 WKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNT 341
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ +V +A ++ MI G PD ++ IL+ CK ++D A Q+ EM RG
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D + LI LC+ + EA F+DM G P+ +T+ L D K+G A
Sbjct: 402 LIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAM 461
Query: 375 KLCNVMSS 382
L M +
Sbjct: 462 GLFRAMEN 469
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 157/341 (46%), Gaps = 6/341 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
++ I+I+ R G I E V + ++ ++D LCK V A
Sbjct: 198 SYSIIIKGLCRVGKTTEVIKLLEHMK----VVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K K PTV Y L++G K+A EM+ N+ P++V + L++
Sbjct: 254 FCKMK--GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ V A ++K M + G+EP+ YNT+++G E + E + P +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+++ LV GYCKA ++ A ++ M RG +P +YN + + +A L++
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M +GY P+ +TY ILL L K+ LD A+ + + M+ G DL T ++I +C+ K
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
F +A F ++ +GL P+ D K G+ A K
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 159/334 (47%), Gaps = 6/334 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G + AI F+ + + + + I++ LC+ G+ +
Sbjct: 163 TFSTLINGFCIEGKIGRAIELFDVM----VARGYKPNVHSYSIIIKGLCRVGKTTEVIKL 218
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K + P V +YN +++ + + V +A + +M+ + P VVTY +L+ G
Sbjct: 219 LEHMKVV--GCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
L R A L+ EM+ I P+ + ++ +ID + + G E +++ P +
Sbjct: 277 RNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDV 336
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY +L+ GYC ++ A K+ ++MIS+G +P +++ + K ++++A L+ +
Sbjct: 337 ATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDE 396
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD ++Y+ L+ LC+ + A ++ K+M G +L T ++L+ L +
Sbjct: 397 MTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGY 456
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+A F M GL P +T+ + D K G
Sbjct: 457 LDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYG 490
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 2/242 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+D +CK+G V A E+ P V YN L+NG+ V +A + +
Sbjct: 304 FSVLIDIMCKEGEVSEARVILKTMTEM--GVEPDVATYNTLMNGYCLRMEVVEARKVFEV 361
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+V ++ LV GYC+ +R+D A +L EM G+ P+ + YNT+I GL +A R
Sbjct: 362 MISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P +VTY+ L+ K G L+ A + + M + G P TYN
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K+GK +DA L+ ++ G P+ + +CK LD A + ++M+
Sbjct: 482 MIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDD 541
Query: 315 CD 316
C
Sbjct: 542 CS 543
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
IL+N + R +V ++ K + PNV+T+ TL+ G+C ++ RAI L M
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G +PN Y+ +I GL G+ EV ++E V P +V Y ++V CK + A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
I M G LP+ TY G+ ++A L +M PD + + +L+ I
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+CKE ++ A + K M G + D+ T L++ C + EA FE MI +G +P
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+F L + + K A++L + M+
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMT 398
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 122/259 (47%)
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
+N+ DA + M N P++V +G L R++ + L K+M GI + +
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
+I+ + ++ + + P ++T+++L+ G+C G + A ++ +M++
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
RG+ P+ +Y+ + + GK + + L M G PD + Y+ ++ LCK+ ++
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A+ + +MK G + T T LIH L + ++ EA +M ++P + F L D
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309
Query: 363 EFKKRGMTALAQKLCNVMS 381
K G + A+ + M+
Sbjct: 310 IMCKEGEVSEARVILKTMT 328
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 11/172 (6%)
Query: 7 KAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK 66
KAK D A L + +PD VS +T LI +A A F+ DM
Sbjct: 383 KAKRIDEAKQLFDEMTHRGLIPDTVSYNT---LISGLCQARRPLEAEELFK-----DMHS 434
Query: 67 N-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
N + + ILLD L KQG + A F R + P + YNI+++G +
Sbjct: 435 NGYPPNLVTYSILLDCLSKQGYLDQAMGLF--RAMENSGLKPDLVTYNIMIDGMCKYGKF 492
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
KDA + E+ + + PN ++G C+ +D A + ++M K+ P
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
L S ++Y + R F + DA++ + M+ + P + + L L + +
Sbjct: 56 LHSSSSYRHKNRTFRN---INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVS 112
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+SK+M+ G D+ + T+LI+ CR+ D + +I+ GL P+ +TF L + F
Sbjct: 113 LSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFC 172
Query: 366 KRGMTALAQKLCNVM 380
G A +L +VM
Sbjct: 173 IEGKIGRAIELFDVM 187
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 163/334 (48%), Gaps = 10/334 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF + R R G + A+ V + A L++ ++ +LC QG V A+
Sbjct: 161 TFGVAARALCRLGRADEALALLRGMARHGCVPD----AVLYQTVIHALCDQGGVTEAATL 216
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
++ L A V ++ ++ G V++A R M + P V+TYG L++G
Sbjct: 217 LNEM--LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
CR+R+ D A + M E N +++NTVI G + G+ E + + E + P
Sbjct: 275 CRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY+ L+ G CK G + A ++L+ M +GF P+ TY F K G +D L +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G T + Y+ ++ LCK+ ++D A+ + +EM+ +GC+ D+ + +I+ LC +
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA FE+++ G+V + +T+ + + G
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDG 484
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 2/296 (0%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
+K A + IL+ LCK GR+ +A R+ + +AP V Y I+L+ + ++
Sbjct: 323 LKGCQPDAHTYSILMHGLCKLGRIGSAVRLL--REMEKKGFAPNVVTYTIVLHSFCKNGM 380
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
D EM + +T N Y ++ C+ R+D A+ L++EMR +G P+ YNT
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 440
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I L + EE M E L +TY +++ + G + A ++ K MI G
Sbjct: 441 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 500
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+YN + K G V+ ++ L +M E G P+ ++Y+IL+ LCKE ++ A+
Sbjct: 501 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 560
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++SK+M +G D+ T LI+ LC+M A E + + P +T+ L
Sbjct: 561 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 616
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 10/305 (3%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
M K G + LL LC+ + A + EL+ V ++N ++ G
Sbjct: 256 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN------VVLFNTVIGGCLAEG 309
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
+ +A + M + P+ TY L+ G C+L R+ A+RL++EM K+G PN + Y
Sbjct: 310 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYT 369
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVT--YTSLVKGYCKAGDLEGASKILKMMI 241
V+ + G +++ ++E + G T+ + Y ++ CK G ++ A +++ M
Sbjct: 370 IVLHSFCKNGMWDDTRALLEE--MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 427
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S+G P +YN + ++E+A +++ ++E G + +TY+ ++ L ++ +
Sbjct: 428 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 487
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A++++KEM GC +D+ + LI +C+ D + E+M +G+ P+ +++ L
Sbjct: 488 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 547
Query: 362 DEFKK 366
E K
Sbjct: 548 SELCK 552
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 149/303 (49%), Gaps = 2/303 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
LF ++ +G++ A+E + + P Y+IL++G + + A R
Sbjct: 297 LFNTVIGGCLAEGKLAEATELYETMGL--KGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 354
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K+ PNVVTY ++ +C+ D L++EM +G+ N+ YN +I L + G
Sbjct: 355 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 414
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E G+++ P + +Y +++ C +E A + + ++ G + + TYN
Sbjct: 415 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 474
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ G+ +DA+ L ++MI G + D ++Y+ L+K +CK+ +D ++ + +EM +
Sbjct: 475 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + + +LI LC+ + +A + M+ +GL P +T+ L + K G A
Sbjct: 535 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 594
Query: 374 QKL 376
L
Sbjct: 595 LNL 597
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 128 AERFWLEMR---KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
A RF L R ++ V P T+G CRL R D A+ L++ M + G P+A++Y T
Sbjct: 140 ARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQT 199
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
VI L + G E + ++ L+ + T+ +V+G C G + A++++ M+++G
Sbjct: 200 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 259
Query: 245 FLPSPTTYNYFFRYFSKF-------------------------------GKVEDAMNLYR 273
+P TY + + + GK+ +A LY
Sbjct: 260 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 319
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G PD TY IL+ LCK ++ A+++ +EM+ +G ++ T T+++H C+
Sbjct: 320 TMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 379
Query: 334 KFDEASAEFEDMIRRGLV 351
+D+ A E+M +GL
Sbjct: 380 MWDDTRALLEEMSAKGLT 397
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 6/267 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ I++ + + GM + E + + N + ++ +LCK GR+ A
Sbjct: 367 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG----YNGMIYALCKDGRMDEAMGL 422
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + Q P + YN ++ ++ +++AE + + +E V N +TY T++
Sbjct: 423 IQEMR--SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 480
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R R A+RL KEM G + + YN +I + + G + ++E P
Sbjct: 481 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 540
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V+Y L+ CK + A ++ K M+++G P TYN K G + A+NL K
Sbjct: 541 VSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK 600
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLD 301
+ PD +TY+IL+ CK LD
Sbjct: 601 LHNENVHPDIITYNILISWHCKVRLLD 627
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + W P+V +N L+NG+ R ++ + R
Sbjct: 142 FFNILMHRFCKEGDIRVALSVF----DAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 197
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 198 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 257
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P +
Sbjct: 258 NGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKIS 317
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G +E A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 318 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREML 377
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ S ++M R G VP +T+ L
Sbjct: 378 SVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 426
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 73 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWXFY 128
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
++ L+ + ++ +NIL++ + + +++ A + + K + P+VV++ TL+ GY
Sbjct: 129 --KEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A ++ K M+S+ P TYN K G ++ A +L +M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+++Y L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 366
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 367 IDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 412
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A+E F + LD+ P + L++G ++ V A + +
Sbjct: 213 YSVLINGLCKESKMDDANELFDEM--LDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQ 270
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M ++++P+++TY TL+ G C+ + +A L+ EMR +G++P+ I Y T+IDG + G
Sbjct: 271 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGD 330
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E +R + V YT+L+ G C+ G A K+L+ M+S G P TY
Sbjct: 331 LETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTM 390
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
F K G V L ++M G+ P +TY++L+
Sbjct: 391 IINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 428
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 173/375 (46%), Gaps = 19/375 (5%)
Query: 14 AWCLLLDKIGGHE-VPDFVSKDTFVILIRRYAR--AGMVEAAIWTFEFANNLDMVKNFDS 70
++C ++ + H+ +P+ +K+ +++ R + A V AAI + D+
Sbjct: 19 SYCTMIHFLCTHQMLPE--AKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIY----- 71
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNILLNGWFRSKNVKDA 128
+F L+ + + G ++ A E + +E + W P T R +L + K K
Sbjct: 72 ---VFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRK---VLEHLMKLKYFKLV 124
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
F+ E+ + ++ + L+ +C+ + A+ + + K G+ P+ + +NT+++G
Sbjct: 125 WXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNG 184
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
+ G +E + P + TY+ L+ G CK ++ A+++ M+ +G +P+
Sbjct: 185 YIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPN 244
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSK 308
T+ K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A +
Sbjct: 245 GVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLID 304
Query: 309 EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
EM+ +G D + T LI C+ + A + MI+ + + + L + G
Sbjct: 305 EMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEG 364
Query: 369 MTALAQKLCNVMSSV 383
+ A+K+ M SV
Sbjct: 365 RSIDAEKMLREMLSV 379
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%)
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K ++ G+ S +N F K G + A++++ + + G P ++++ L+ +
Sbjct: 129 KEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRL 188
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
LD ++ M G D+ T ++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF
Sbjct: 189 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 248
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
L D K G LA ++ M S S +L+
Sbjct: 249 TTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLI 281
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G ++ A E H+++ + ++ Y L++G + DAE+ E
Sbjct: 318 YTTLIDGCCKEGDLETAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLRE 375
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V +L+KEM+++G P+ + YN +++G
Sbjct: 376 MLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 161/343 (46%), Gaps = 41/343 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ LCK G + A E HK + Q P V +YN++++G + V +A + +
Sbjct: 186 YGTLINGLCKIGLTREAFELLHKME--GQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSD 243
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + P+V TY L+ G+C L + RL+ +M + N YN +ID L + G
Sbjct: 244 VVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGM 303
Query: 195 FEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ M R L+ E G P +VT+ +L+ GYC D+ A K+ G P +Y
Sbjct: 304 LGKAHDM--RNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSY 361
Query: 253 NYFFRYFSKFGKVEDAMNLYRKM-----------------------------------IE 277
N + K ++++A++L+ KM +
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHD 421
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G +P+ +TY+I+L LCK +D AI++ M RG ++ + +LI+ C+ + DE
Sbjct: 422 GGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDE 481
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
A FE+M RR LVP +T+ L D K G + A +L NVM
Sbjct: 482 AMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVM 524
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 37/328 (11%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ +++D LCK G V A + + + + P V Y L++G+ ++ R
Sbjct: 220 IYNMIVDGLCKDGLVTEARDLY--SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLC 277
Query: 134 EMRKENVT-----------------------------------PNVVTYGTLVEGYCRLR 158
+M NV P++VT+ TL+ GYC
Sbjct: 278 DMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYN 337
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
V A +L + GI P+ YN +I G + R +E + + + P +VTY+
Sbjct: 338 DVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYS 397
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL+ G CK+G + A ++ + G P+ TYN K V+ A+ L+ M E
Sbjct: 398 SLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER 457
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G TP+ +Y+IL+ CK ++D A+ + +EM R D T LI LC+ + A
Sbjct: 458 GLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHA 517
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
F M G +T+ L D F K
Sbjct: 518 WELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 8/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ C G + A L + + ++ G + V+ A F
Sbjct: 116 LSILINCYCHLGHMGFAFSVL--GMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDS 173
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + VTYGTL+ G C++ A L+ +M + + PN ++YN ++DGL + G
Sbjct: 174 VVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGL 233
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + P + TYT L+ G+C G +++L M+ R + TYN
Sbjct: 234 VTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNI 293
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G + A ++ MIE G PD +T++ L+ C + + A ++ G
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECG 353
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ + +LI C+ + DEA + F M + L P+ +T+ L D K G + A
Sbjct: 354 ITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAW 413
Query: 375 KLCNVMSSVPRSME------LLDSRCK 395
+L + + S +LD+ CK
Sbjct: 414 ELFSAIHDGGPSPNVITYNIMLDALCK 440
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ CK R+ A F+K + AP + Y+ L++G +S + A +
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNY--KKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ +PNV+TY +++ C+++ VD+AI L M + G+ PN YN +I+G ++ R
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E P VTY L+ G CK+G + A ++ +M G TYN
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538
Query: 255 FFRYFSKFGKV 265
F FSK V
Sbjct: 539 LFDAFSKIQHV 549
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 16/301 (5%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P+V +N++L + K+ A +M +TP++VT L+ YC L + A +
Sbjct: 76 PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV-----SGMMERFLVCEPGPTMVTYTSLV 221
+ + K G + NAI T++ GL G + S + + FL+ E VTY +L+
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDE-----VTYGTLI 190
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G CK G A ++L M + P+ YN K G V +A +LY ++ G
Sbjct: 191 NGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGID 250
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD TY L+ C + ++ +M R ++++ T +LI LC+ +A
Sbjct: 251 PDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDM 310
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCK 395
MI RG P +TF L + A+KL C + V L+ CK
Sbjct: 311 RNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCK 370
Query: 396 D 396
+
Sbjct: 371 N 371
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ DA + + + P+VV + ++ +++ AI L K+M GI P+ + +
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I+ G ++ L +T T+++KG C G++ A + ++++G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
FL TY K G +A L KM P+ + Y++++ LCK+ + A
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ ++ RG D D+ T T LIH C + ++ E + DM+ R + + T+ L D
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298
Query: 365 KKRGMTALAQKLCNVM 380
K+GM A + N+M
Sbjct: 299 CKKGMLGKAHDMRNLM 314
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 250 TTYNYFFRYFSK-----------FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ ++ F R+FS F ++DA+ L+ ++I P + ++++L + K
Sbjct: 33 SKFSVFLRFFSDSQKQNAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMK 92
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
AI +SK+M RG + T ++LI+ C + A + +++RG + +T
Sbjct: 93 HYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAIT-- 150
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+T + + LC + V +++E DS
Sbjct: 151 ----------LTTIMKGLC-INGEVRKALEFHDS 173
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 45/370 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +L+R + AG ++AA+ + ++ S++ + +LCK G+V A E
Sbjct: 20 TYFVLVRAHCLAGELQAAM---DLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV--- 151
K D + P V +N L+ G ++ + +A++ EM + N+VTY TL+
Sbjct: 77 VKNMK--DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 152 -----------------------------EGYCRLRRVDRAIRLVKEMR-KEGIEPNAIV 181
G+C+ +DRA ++EM+ + G P+
Sbjct: 135 SSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFT 194
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFL----VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
Y+ +I+GL ++ + +++ + C ++V + +LV GYCKA DL+ A ++L
Sbjct: 195 YSILINGLCKSSNLRKADELLQEMIGRKDCC---ASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ G P TY+ + G V+ L KM+ G PD +TY +L+ LCK
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K+ A ++ K M GC + T +++ LC++ K D A+ + +G V + F
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371
Query: 358 KRLNDEFKKR 367
+ L KKR
Sbjct: 372 ETLLLSVKKR 381
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 141/292 (48%), Gaps = 12/292 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA D A +L + + V+ +T + + R+G EA +
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSG--EAVLVMQGMTT 152
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D + ++ CK G + A + + K+ +P Y+IL+NG
Sbjct: 153 TPD--------TQTYNAIIHGFCKSGEIDRAYGFLEEMKQ-RAGCSPDTFTYSILINGLC 203
Query: 121 RSKNVKDAERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S N++ A+ EM +++ +VV + TLV+GYC+ + +DRA L+ M + G P+
Sbjct: 204 KSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y+T+IDGL G ++ ++E+ + P +VTYT LV G CKAG + A +++K
Sbjct: 264 VTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKR 323
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
M+ G P+ TY+ F K K++ A +L + + G D + + LL
Sbjct: 324 MLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 16/316 (5%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ L K+ + A ++ + G PD V TF LI +AG ++ A +
Sbjct: 61 VHALCKSGKVPEAMEVVKNMKDGACKPDVV---TFNTLIAGLCKAGRLDEAQQVLDEMER 117
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
F + + L++ L GR A + P + YN +++G+ +
Sbjct: 118 ----SGFAANLVTYNTLINGLSSAGRSGEAVLVMQG-----MTTTPDTQTYNAIIHGFCK 168
Query: 122 SKNVKDAERFWLEMR-KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPN 178
S + A F EM+ + +P+ TY L+ G C+ + +A L++EM RK+ +
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC-AS 227
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ +NT++DG +A + ++ L P +VTY++++ G C+ GD++ +L+
Sbjct: 228 VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+SRG P TY K GK+ +A L ++M+E G TP+ +TY ++ LCK D
Sbjct: 288 KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKID 347
Query: 299 KLDLAIQVSKEMKCRG 314
KLD+A + ++ +G
Sbjct: 348 KLDMANDLLTSIRDKG 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY R G+++ AM+L R+M + G P Y+ + LCK K+ A++V K
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
MK C D+ T LI LC+ + DEA ++M R G + +T+ L + G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 370 TALAQKLCNVMSSVP 384
+ A + M++ P
Sbjct: 140 SGEAVLVMQGMTTTP 154
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 168/361 (46%), Gaps = 19/361 (5%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLD--------MVKN- 67
++ D GG PD VS +T + G + I T A +D MVKN
Sbjct: 188 MMADDRGGGSPPDVVSYNTVL--------NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNG 239
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
+ +L C G+ K A K + P V Y+ L+N ++ +
Sbjct: 240 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS--DGVEPNVVTYSSLMNYLCKNGRSTE 297
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + + M K + P++ TY TL++G+C+ RV + +L M + G++P+ I YNT+ID
Sbjct: 298 ARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 357
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G AG+ +E + ++ + P +VTY +L+ GYC+ ++ A + K M+S G P
Sbjct: 358 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 417
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN + + A LY + +SG + TY+I+L LCK + D A+++
Sbjct: 418 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 477
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ + ++ T ++I L + + DEA F GLVP T+ + + ++
Sbjct: 478 QNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQ 537
Query: 368 G 368
G
Sbjct: 538 G 538
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 16/366 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI RAG ++ F N+ + K F A F LL LC R A +
Sbjct: 94 TYAILIGCCCRAGRLDLG---FAALGNV-VKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWF---RSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+R + P V YN LL G RS+ + + R P+VV+Y T++
Sbjct: 150 VLRRMT-ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 152 EGYCR--------LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
G+ + + +D+A+ ++ M K G+ P+ + YN+++ G +G+ +E G ++
Sbjct: 209 NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 268
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P +VTY+SL+ CK G A KI M RG P TY + K G
Sbjct: 269 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEG 328
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+V ++ L+ M+ G PD +TY+ L+ C K+D A ++ M G D+ T
Sbjct: 329 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 388
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
LI+ CR+ + D+A A F++M+ G+ P+ +T+ + TA A++L ++
Sbjct: 389 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 448
Query: 384 PRSMEL 389
+EL
Sbjct: 449 GTQLEL 454
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 2/253 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+ + + + LL CK+GRV + + F + P + YN L++G + +
Sbjct: 308 RGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRI--GVKPDIITYNTLIDGCCLAGKM 365
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + M V P++VTYGTL+ GYCR+ R+D A+ L KEM G+ PN I YN +
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ GL R + + TY ++ G CK + A ++ + +
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 485
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
T+N K G++++A +L+ +G PD TY ++ + L ++ L+
Sbjct: 486 QLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDD 545
Query: 306 VSKEMKCRGCDID 318
+ M+ GC D
Sbjct: 546 LFLSMEENGCSAD 558
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 14/254 (5%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
VTP V TY L+ CR R+D + + K+G +AI + ++ GL R +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 200 GMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMI---SRGFLPSPTTYNY 254
++ R + E G P + +Y +L+KG C + A ++L MM G P +YN
Sbjct: 148 DIVLRRMT-ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 255 FFRYFSKFG--------KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
F K G ++ AM + M+++G PD +TY+ +L C + AI
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
K+M+ G + ++ T + L++ LC+ + EA F+ M +RGL P T++ L K
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326
Query: 367 RGMTALAQKLCNVM 380
G ++KL ++M
Sbjct: 327 EGRVIESEKLFDLM 340
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D C G++ A++ + P + Y L+NG+ R + DA + E
Sbjct: 352 YNTLIDGCCLAGKMDEATKLLASMVSV--GVKPDIVTYGTLINGYCRVSRMDDALALFKE 409
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+PN++TY +++G RR A L + K G + YN ++ GL +
Sbjct: 410 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 469
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E M + + + T+ ++ K G ++ A + + G +P TY+
Sbjct: 470 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 529
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD-RLTYHILLKILCKED 298
+ G +E+ +L+ M E+G + D R+ I+ K+L + D
Sbjct: 530 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 574
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 167/341 (48%), Gaps = 13/341 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V F ++ + R+G ++ A+ F ++ + ++ IL+ C++G
Sbjct: 362 VPDLV---CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD----NVIYTILIQGYCRKG 414
Query: 87 RVKAASEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ SE + R E L Q A V YN +L+G + K + +A++ + EM + + P+
Sbjct: 415 MI---SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSY 471
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
T L++G+C+L + A+ L K+M+++ I+ + + YNT++DG + G + +
Sbjct: 472 TLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM 531
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ E PT ++++ LV C G L A ++ MIS+ P+ N + + + G
Sbjct: 532 VSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNA 591
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM--KCRGCDIDLDTST 323
D KMI G+ PD ++Y+ L+ KE+ + A + K+M K G D+ T
Sbjct: 592 SDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYN 651
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++H CR + EA A MI RG+ P T+ L + F
Sbjct: 652 SILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 161/343 (46%), Gaps = 10/343 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +LIR + +A + A F + + D+ +L + SL + G V+ A +
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNAL----IGSLVRIGWVELAWRIY 213
Query: 96 HKRKELDQSWAPTVRVY--NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+E+ +S V VY NI++N + ++ F E++++ V P++VTY TL+
Sbjct: 214 ---QEISRSGV-GVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISA 269
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y ++ A L+ M +G P YNTVI+GL + G++E + L P
Sbjct: 270 YSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 329
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
TY SL+ CK GD I M SR +P ++ F++ G ++ A+ +
Sbjct: 330 STTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+ E+G PD + Y IL++ C++ + A+ + EM +GC +D+ T ++H LC+
Sbjct: 390 SVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 449
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA F +M RGL P T L D K G A +L
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 158/352 (44%), Gaps = 9/352 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ L K + + L + PD V+ +T LI Y+ G++E A FE +
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT---LISAYSSQGLMEEA---FELMH 284
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ K F G + +++ LCK G+ + A E F + L +P Y LL
Sbjct: 285 AMP-SKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM--LRSGLSPDSTTYRSLLMEAC 341
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + + E + +MR +V P++V + +++ + R +D+A+ +++ G+ P+ +
Sbjct: 342 KKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 401
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y +I G G E + L +VTY +++ G CK L A K+ M
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
RG P T K G +++AM L++KM E D +TY+ LL K +
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A ++ +M + + ++L++ LC EA +++MI + + P
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 161/346 (46%), Gaps = 6/346 (1%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
VS D LI R G VE A ++ + + N + I++++LCK G+++
Sbjct: 188 VSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYT----LNIMVNALCKDGKMEK 243
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ + +E + P + YN L++ + +++A M + +P V TY T+
Sbjct: 244 VGTFLSEVQE--KGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTV 301
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G C+ + +RA + EM + G+ P++ Y +++ + G E + +
Sbjct: 302 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDV 361
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P +V ++S++ + ++G+L+ A + G +P Y + + + G + +AMN
Sbjct: 362 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMN 421
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M++ G D +TY+ +L LCK L A ++ EM RG D T T+LI C
Sbjct: 422 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHC 481
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ A F+ M + + +T+ L D F K G A+++
Sbjct: 482 KLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEI 527
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 4/244 (1%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
IL+D CK G ++ A E F K KE + V YN LL+G+ + ++ A+ W +M
Sbjct: 475 ILIDGHCKLGNLQNAMELFKKMKE--KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 532
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ + P +++ LV C + A R+ EM + I+P ++ N++I G +G
Sbjct: 533 SKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNAS 592
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR--GFLPSPTTYNY 254
+ +E+ + P ++Y +L+ G+ K ++ A ++K M + G +P TYN
Sbjct: 593 DGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNS 652
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + ++++A + RKMIE G PDR TY L+ +D L A + EM RG
Sbjct: 653 ILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG 712
Query: 315 CDID 318
D
Sbjct: 713 FSPD 716
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V+++L+ + +++ +++A + +R + T ++ L+ R+ V+ A R+ +E+
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAG 228
+ G+ N N +++ L + G+ E+V + V E G P +VTY +L+ Y G
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSE--VQEKGVYPDIVTYNTLISAYSSQG 274
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+E A +++ M S+GF P TYN K GK E A ++ +M+ SG +PD TY
Sbjct: 275 LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 334
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
LL CK+ + +M+ R DL + ++ L R D+A F +
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
GL+P + + L + ++GM + A L N M
Sbjct: 395 GLIPDNVIYTILIQGYCRKGMISEAMNLRNEM 426
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 16/255 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTF----EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
T ILI + + G ++ A+ F E LD+V + LLD K G +
Sbjct: 472 TLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVT--------YNTLLDGFGKVGDIDT 523
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E + + + PT ++IL+N ++ +A R W EM +++ P V+ ++
Sbjct: 524 AKEIWADM--VSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++GYCR +++M EG P+ I YNT+I G V+ + G++++ +
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641
Query: 211 G--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
G P + TY S++ G+C+ ++ A +L+ MI RG P +TY F + +A
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701
Query: 269 MNLYRKMIESGYTPD 283
+ +M++ G++PD
Sbjct: 702 FRFHDEMLQRGFSPD 716
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 159/342 (46%), Gaps = 8/342 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F +LIR Y +A + A F + K F L+ SL + G V+ A +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRS----KGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 96 HKRKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+E+ +S V NI++N + ++ F +++++ V P++VTY TL+ Y
Sbjct: 224 ---QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
++ A L+ M +G P YNTVI+GL + G++E + L P
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY SL+ CK GD+ K+ M SR +P ++ F++ G ++ A+ +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
+ E+G PD + Y IL++ C++ + +A+ + EM +GC +D+ T ++H LC+
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
EA F +M R L P T L D K G A +L
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 27/362 (7%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD V F ++ + R+G ++ A+ F ++ + ++ IL+ C++G
Sbjct: 372 VPDLV---CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD----NVIYTILIQGYCRKG 424
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + + L Q A V YN +L+G + K + +A++ + EM + + P+ T
Sbjct: 425 MISVAMNL--RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
L++G+C+L + A+ L ++M+++ I + + YNT++DG + G + + +
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
E PT ++Y+ LV C G L A ++ MIS+ P+ N + + + G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR--GCDIDLDTSTM 324
D + KMI G+ PD ++Y+ L+ +E+ + A + K+M+ G D+ T
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK----------------RLNDEFKKRG 368
++H CR + EA MI RG+ P T+ R++DE +RG
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 369 MT 370
+
Sbjct: 723 FS 724
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 171/358 (47%), Gaps = 19/358 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI----WTF 56
M+ + ++ D A +PD V + ILI+ Y R GM+ A+
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNV---IYTILIQGYCRKGMISVAMNLRNEML 437
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
+ +D+V + +L LCK+ + A + F++ E ++ P IL+
Sbjct: 438 QQGCAMDVVT--------YNTILHGLCKRKMLGEADKLFNEMTE--RALFPDSYTLTILI 487
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G + N+++A + +M+++ + +VVTY TL++G+ ++ +D A + +M + I
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P I Y+ +++ L G E + + + PT++ S++KGYC++G+
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE--SGYTPDRLTYHILLKIL 294
L+ MIS GF+P +YN F + + A L +KM E G PD TY+ +L
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+++++ A V ++M RG + D T T +I+ EA ++M++RG P
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 157/372 (42%), Gaps = 52/372 (13%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ +T LI Y+ G++E A FE N + K F G + +++ LCK G+
Sbjct: 268 PDIVTYNT---LISAYSSKGLMEEA---FELMNAMPG-KGFSPGVYTYNTVINGLCKHGK 320
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV-- 145
+ A E F + L +P Y LL + +V + E+ + +MR +V P++V
Sbjct: 321 YERAKEVFAEM--LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 146 ---------------------------------TYGTLVEGYCRLRRVDRAIRLVKEMRK 172
Y L++GYCR + A+ L EM +
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+G + + YNT++ GL + E + M ER L P T T L+ G+CK G
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF----PDSYTLTILIDGHCKLG 494
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+L+ A ++ + M + TYN F K G ++ A ++ M+ P ++Y
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
IL+ LC + L A +V EM + + +I CR + + E MI
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 349 GLVPHYLTFKRL 360
G VP +++ L
Sbjct: 615 GFVPDCISYNTL 626
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 135/272 (49%), Gaps = 4/272 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V+++L+ + +++ +++A + +R + T ++ L+ R+ V+ A + +E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAG 228
+ G+ N N +++ L + G+ E+V + + V E G P +VTY +L+ Y G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ--VQEKGVYPDIVTYNTLISAYSSKG 284
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+E A +++ M +GF P TYN K GK E A ++ +M+ SG +PD TY
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
LL CK+ + +V +M+ R DL + ++ L R D+A F +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
GL+P + + L + ++GM ++A L N M
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 16/255 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANN----LDMVKNFDSGASLFEILLDSLCKQGRVKA 90
T ILI + + G ++ A+ F+ LD+V + LLD K G +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT--------YNTLLDGFGKVGDIDT 533
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A E + + + PT Y+IL+N ++ +A R W EM +N+ P V+ ++
Sbjct: 534 AKEIWADM--VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++GYCR +++M EG P+ I YNT+I G V + G++++ +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 211 G--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
G P + TY S++ G+C+ ++ A +L+ MI RG P +TY F + +A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 269 MNLYRKMIESGYTPD 283
++ +M++ G++PD
Sbjct: 712 FRIHDEMLQRGFSPD 726
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 166/387 (42%), Gaps = 41/387 (10%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
VS D LI R G VE A ++ + + N + I++++LCK G+++
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT----LNIMVNALCKDGKMEK 253
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
+ + +E + P + YN L++ + +++A M + +P V TY T+
Sbjct: 254 VGTFLSQVQE--KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV------------ 198
+ G C+ + +RA + EM + G+ P++ Y +++ + G E
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 199 -------SGMMERFL--------------VCEPG--PTMVTYTSLVKGYCKAGDLEGASK 235
S MM F V E G P V YT L++GYC+ G + A
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G TYN K + +A L+ +M E PD T IL+ C
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K L A+++ ++MK + +D+ T L+ ++ D A + DM+ + ++P +
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSS 382
++ L + +G A A ++ + M S
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMIS 578
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 93/230 (40%)
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
N N + L+ Y + R++ A +R +G + N +I LV G E
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
G+ + G + T +V CK G +E L + +G P TYN
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+S G +E+A L M G++P TY+ ++ LCK K + A +V EM G D
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
T L+ C+ E F DM R +VP + F + F + G
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 2/268 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
+L+ +CK G +A + K + + P V Y I+++ + + DA F+ EM
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEH--RKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMET 293
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + NV TY +L+ +C R D +L+++M I PN + ++ +ID LV+ G+ E
Sbjct: 294 KGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTE 353
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + P +TY SL+ G C L+ A++++ +M+S+G P TYN
Sbjct: 354 AKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILIN 413
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K +V+D M L+RKM G D +TY L++ C+ KL +A +V +EM +G
Sbjct: 414 GFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHP 473
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+ T +L+ LC + +EA + M
Sbjct: 474 GIMTYAILLDGLCDNGELEEALGILDQM 501
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 147/315 (46%), Gaps = 2/315 (0%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
++ F LL+ LC +GRV A E + P + N ++NG V +
Sbjct: 156 YEPNTVTFNTLLNGLCLEGRVFEAVELVDCM--VLSQHVPDLITLNTIVNGLCLKDRVSE 213
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A M PN TYG ++ C+ A+ L+++M I+P+ + Y +ID
Sbjct: 214 AVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIID 273
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
L + GR ++ + TY SL+ +C G + +++L+ MI+R P
Sbjct: 274 NLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITP 333
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ T++ K GK+ +A +LY +MI G P+ +TY+ L+ LC + +LD A Q+
Sbjct: 334 NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMM 393
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M +GCD D+ T +LI+ C+ + D+ F M RG++ +T+ L F +
Sbjct: 394 DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQS 453
Query: 368 GMTALAQKLCNVMSS 382
+A+K+ M S
Sbjct: 454 RKLIVAKKVFQEMVS 468
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 143/277 (51%), Gaps = 4/277 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D+LCK GR+ A +F + + + V YN L+ + D + +
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMET--KGIKANVFTYNSLIGSFCSFGRWDDGAQLLRD 325
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +TPNVVT+ L++ + ++ A L EM GIEPN I YN++I GL R
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + MM+ + P + TY L+ G+CKA ++ ++ + M RG + TY+
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM-KCR 313
+ F + K+ A ++++M+ G P +TY ILL LC +L+ A+ + +M KC+
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
++D+ ++IH +C K D+A + F + +G+
Sbjct: 506 -MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGV 541
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+++ LC + RV A + + + P Y +LN +S N A +
Sbjct: 198 LNTIVNGLCLKDRVSEAVDLIARM--MANGCQPNQFTYGPILNRMCKSGNTASALDLLRK 255
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VVTY +++ C+ R+D A+ EM +GI+ N YN++I GR
Sbjct: 256 MEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+++ + ++ + + P +VT+++L+ K G L A + MI+RG P+ TYN
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNS 375
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++++A + M+ G PD TY+IL+ CK ++D +++ ++M RG
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T + LI C+ K A F++M+ +G+ P +T+ L D G
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNG 489
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 154/319 (48%), Gaps = 9/319 (2%)
Query: 11 FDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS 70
+D LL D I P+ V TF LI + G + A + N + + +
Sbjct: 316 WDDGAQLLRDMITRKITPNVV---TFSALIDSLVKEGKLTEAKDLY----NEMITRGIEP 368
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
+ L+ LC R+ A++ + + P + YNIL+NG+ ++K V D R
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMMDLM--VSKGCDPDIWTYNILINGFCKAKQVDDGMR 426
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M + + VTY TL++G+C+ R++ A ++ +EM +G+ P + Y ++DGL
Sbjct: 427 LFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G EE G++++ C+ + Y ++ G C A ++ A + + S+G
Sbjct: 487 DNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQ 546
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+YN K + +A L+RKM E GY PD TY+ L++ + + + ++Q+ +EM
Sbjct: 547 SYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606
Query: 311 KCRGCDIDLDTSTMLIHLL 329
K G D T +++ +L
Sbjct: 607 KRCGFSSDASTVKIVMDML 625
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 2/282 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV +N L R+K +M + + ++ T ++ +CR R++ A
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EPN + +NT+++GL GR E +++ ++ + P ++T ++V G C
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A ++ M++ G P+ TY K G A++L RKM P +T
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK+ +LD A+ EM+ +G ++ T LI C ++D+ + DMI
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
R + P+ +TF L D K G A+ L N M + R +E
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM--ITRGIE 367
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 134/292 (45%), Gaps = 2/292 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
I+++ C++ ++ A K +L + P +N LLNG V +A
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKL--GYEPNTVTFNTLLNGLCLEGRVFEAVELVDC 185
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+++T T+V G C RV A+ L+ M G +PN Y +++ + ++G
Sbjct: 186 MVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGN 245
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P +VTYT ++ CK G L+ A M ++G + TYN
Sbjct: 246 TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNS 305
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F FG+ +D L R MI TP+ +T+ L+ L KE KL A + EM RG
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ + T LI+ LC + DEA+ + M+ +G P T+ L + F K
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCK 417
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 2/288 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+DSL K+G++ A + +++ + + P YN L+ G K + +A +
Sbjct: 338 FSALIDSLVKEGKLTEAKDLYNEM--ITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDL 395
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P++ TY L+ G+C+ ++VD +RL ++M G+ + + Y+T+I G ++ +
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRK 455
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + P ++TY L+ G C G+LE A IL M YN
Sbjct: 456 LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
KV+DA +L+ + G D +Y+I+L LCK L A + ++MK G
Sbjct: 516 IIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG 575
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
+ D T LI R + E+M R G T K + D
Sbjct: 576 YEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD 623
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%)
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A+ L + M + P I +N + L +++ V + ++ + + T +
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
+ +C+ L A + + G+ P+ T+N G+V +A+ L M+ S +
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD +T + ++ LC +D++ A+ + M GC + T +++ +C+ A
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
M R + PH +T+ + D K G
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDG 279
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA+ L++ M+ S P + ++ L +L + + DL + + K+M+ +G DL T
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++I+ CR K A + + + G P+ +TF L + G A +L + M
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCM 186
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 177/379 (46%), Gaps = 9/379 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I V K K SA + + G ++ D F LI Y +G + AI +
Sbjct: 38 IVVSRKGKGSASAVFAAILETKGTQISDIY---VFSGLITAYLESGFLRDAIECYRLTKE 94
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
FD+ + E L+ K K ++ + L+ + ++ +NIL++ + +
Sbjct: 95 HKFRVPFDTXRKVIEHLM----KLKYFKLVWGFY--EESLEYGYPASLYFFNILMHSFVK 148
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
++ A+ + + K + P+VV++ TL+ GY +L +D RL M+ G++P+
Sbjct: 149 EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y+ +I+GL + + E+ + + + L P VT+T+L+ G+CK G ++ A +I K M+
Sbjct: 209 YSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
S+ P TYN K G ++ A +L +M G PD++TY L+ CKE L+
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLE 328
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + K M +D T LI LC+ + +A +M+ GL P T+ +
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 362 DEFKKRGMTALAQKLCNVM 380
+EF K+G KL M
Sbjct: 389 NEFCKKGDVWTGSKLLKEM 407
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 9/306 (2%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVR 110
+W F + +L+ + + F IL+ S K+G ++ A F + W P+V
Sbjct: 120 VWGF-YEESLEY--GYPASLYFFNILMHSFVKEGEIRLAQSVF----DAITKWGLRPSVV 172
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + ++ + R M+ V P+V TY L+ G C+ +++ A L EM
Sbjct: 173 SFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEM 232
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
G+ PN + + T+IDG + GR + + ++ L P ++TY +L+ G CK GDL
Sbjct: 233 LNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A + M +G P TY K G +E A ++MI+ D + Y L
Sbjct: 293 KQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 351 VPHYLT 356
VP +T
Sbjct: 413 VPSVVT 418
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N++ + + EG RL A + + K G+ P+ + +NT+++G ++ G +E +
Sbjct: 140 NILMHSFVKEGEIRL-----AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P + TY+ L+ G CK +E A+++ M++ G +P+ T+ K
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKN 254
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A ++ EM +G D T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITY 314
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T LI C+ + A + MI+ + + + L + G + A+K+ M S
Sbjct: 315 TTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 383 V 383
V
Sbjct: 375 V 375
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 6/218 (2%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
VI+ L++ F+ V G E L ++ + L+ + K G++ A + + G
Sbjct: 107 VIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS ++N + K G +++ L M SG PD TY +L+ LCKE K++ A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDAN 226
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ EM G + T T LI C+ + D A ++ M+ + L P +T+ L
Sbjct: 227 ELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 365 KKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
K+G AQ L + MS P + L+D CK+
Sbjct: 287 CKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKE 324
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 170/401 (42%), Gaps = 68/401 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF IL+R Y RAG+ + + ++ N L+ L+ S CK+G+ A +
Sbjct: 184 TFGILVRGYCRAGLASKGLELLGQMRTMGILPN----NVLYNTLISSFCKEGKTHDAEKL 239
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN----VTPNVVTYGTL 150
K +E P V +N ++ S + +A R + +M+ + PNV+TY +
Sbjct: 240 VDKMRE--DGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLM 297
Query: 151 VEGYCRLRRVDRAIRLV-----------------------------------KEMRKEGI 175
+ G+C+ ++ A LV KEM GI
Sbjct: 298 LMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGI 357
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
EP+ YN V+DGL + G + +M + P VTY++L+ GYC G + A+
Sbjct: 358 EPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANN 417
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L MIS P+ T N K G++ +A NL +KM E GY D +T +I++ LC
Sbjct: 418 LLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALC 477
Query: 296 KEDKLDLAIQVSKEMKCRG-----------------------CDIDLDTSTMLIHLLCRM 332
+LD AI++ M G C DL T + +I LC+
Sbjct: 478 NNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKA 537
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ D+A +F +M+ +GL P + F + G + A
Sbjct: 538 GRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 157/351 (44%), Gaps = 12/351 (3%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEY 94
+ +L++ R VE W ++ DMV A F +L+ LC G ++ A E
Sbjct: 115 YNVLLKSCIRENRVELVSWLYK-----DMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F K + P + IL+ G+ R+ +MR + PN V Y TL+ +
Sbjct: 170 FDKMPA--RGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSF 227
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE----P 210
C+ + A +LV +MR++G+ P+ +N+ I L +G+ E S + + E P
Sbjct: 228 CKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLP 287
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P ++TY ++ G+CK G LE A ++ M + +YN + + GK+ +A
Sbjct: 288 HPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWI 347
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ ++M+ G PD +Y+I++ LCK L A + M G D T + L+H C
Sbjct: 348 VLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYC 407
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
K EA+ +MI P+ T L K G + A+ L M+
Sbjct: 408 SKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 166/354 (46%), Gaps = 23/354 (6%)
Query: 14 AWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGA 72
AW +L + +G PD S + I++ + GM+ A M++N
Sbjct: 345 AWIVLKEMLGIGIEPDIYS---YNIVMDGLCKNGMLSDARMLMGL-----MIRNGILPDT 396
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ LL C +G+V A+ H+ + + +P N+LL+ ++ + +AE
Sbjct: 397 VTYSTLLHGYCSKGKVFEANNLLHEM--ISNNCSPNTYTCNVLLHSLWKEGRISEAENLL 454
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M ++ + VT ++ C ++D+AI +V M G + N+ I GLV+
Sbjct: 455 QKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI-GLVD- 512
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ +SG + P +VTY++++ G CKAG L+ A K M+S+G P Y
Sbjct: 513 ---DTISGK-------KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIY 562
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ F F + GK+ A + + M + G TY+ L+ L ++++ + EM+
Sbjct: 563 DTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMRE 622
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+G D+ T +++ LC + ++A + ++M+++G+ P+ +F+ L F K
Sbjct: 623 KGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCK 676
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 14/351 (3%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNF---DSGASLFEILLDSLCKQGRVKAASEYF 95
L+ A++G AI F+ + NF L+ +LL S ++ RV+ S +
Sbjct: 81 LVTVLAKSGFFNKAISHFK-----SLRSNFPEKQPSIYLYNVLLKSCIRENRVELVS-WL 134
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+K L + +P +N+L+ S +++DA + +M PN T+G LV GYC
Sbjct: 135 YKDMVLARV-SPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYC 193
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R + + L+ +MR GI PN ++YNT+I + G+ + ++++ P +
Sbjct: 194 RAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVE 253
Query: 216 TYTSLVKGYCKAGDLEGASKILK-MMISRGF-LPSPT--TYNYFFRYFSKFGKVEDAMNL 271
T+ S + C +G + AS+I + M I LP P TY F K G +E+A L
Sbjct: 254 TFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTL 313
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M + + +Y+I L L + KL A V KEM G + D+ + +++ LC+
Sbjct: 314 VDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCK 373
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+A MIR G++P +T+ L + +G A L + M S
Sbjct: 374 NGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMIS 424
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ LCK GR+ A + F + + + P +Y+ ++ + R + A + +
Sbjct: 527 YSTIISGLCKAGRLDDAKKKFIEM--MSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKD 584
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K + TY +L+ G ++ L+ EMR++G+ P+ YN +++ L E GR
Sbjct: 585 MEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGR 644
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +++ L P + ++ L+K +CKA D + + ++ ++ ++ Y
Sbjct: 645 INDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCG-HKEALYTL 703
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F GKV +A L+ ++ + Y L+ LCK++KL+ A
Sbjct: 704 MFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAA----------- 752
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEAS 339
S +L L+ + Y+FD AS
Sbjct: 753 -------SDVLHRLIDKGYQFDPAS 770
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 134/297 (45%), Gaps = 15/297 (5%)
Query: 17 LLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF 75
L+ D I G + PD V T+ +I +AG ++ A F M K ++++
Sbjct: 510 LVDDTISGKKCTPDLV---TYSTIISGLCKAGRLDDAKKKFIEM----MSKGLQPDSAIY 562
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ + S C++G++ +A F K++++ T++ YN L+ G + + E
Sbjct: 563 DTFIHSFCREGKISSA---FQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDE 619
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR++ V+P+V TY ++ C R++ A ++ EM ++GI PN + +I +A
Sbjct: 620 MREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACD 679
Query: 195 FEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F+ + E L VC G YT + G + A ++ + + R F Y
Sbjct: 680 FKASHEVFEIALNVC--GHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYK 737
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
K K+E A ++ ++I+ GY D ++ ++ K +A ++++ M
Sbjct: 738 DLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P Y++LLK +E++++L + K+M + T +LI LLC ++A
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCK 395
F+ M RG P+ TF L + + G+ + +L M + +P ++ L+ S CK
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229
Query: 396 D 396
+
Sbjct: 230 E 230
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 13/368 (3%)
Query: 20 DKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILL 79
D + PD VS F L+ Y R G + A F+ D+V + + L+
Sbjct: 345 DMLKSKFTPDIVS---FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT----YNTLI 397
Query: 80 DSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN 139
LC G + AA K++ DQ P + Y IL+NG F+ V A F+ EM +
Sbjct: 398 HGLCMWGYLDAALRL--KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS 199
+ P+ Y T + G ++ A + +EM G P+ I YN + L + G FEE
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYF 259
++E + P VTYTS++ G+ K G L A ++ M+S+G PS TY
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAH 575
Query: 260 SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
+ ++ A + KM+E + +TY+ ++ LC ++D A + EM+ +G +
Sbjct: 576 AAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNK 635
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP----HYLTFKRLNDEFKKRGMTALAQK 375
+ T+LI+ C M ++EA + +M+ R + P H + K L+ +++ + +
Sbjct: 636 FSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESL 695
Query: 376 LCNVMSSV 383
+ NV ++
Sbjct: 696 IQNVEDNI 703
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 22/359 (6%)
Query: 28 PDFV-SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD---SGASLFEILLDSLC 83
PDF S+ F ++ ++ AA W E + +M D +G ++ D +
Sbjct: 113 PDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMI 172
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G + P V+ N +L + A+ + M + + P
Sbjct: 173 RNGLL------------------PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPT 214
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VVTY T+++ YC+ RVD+A+ L+ EM++ G PN + YN +++GL + G E+ G++E
Sbjct: 215 VVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIE 274
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L + TY L+ G+C+ G A +++ M++R P+ +TYN K+
Sbjct: 275 EMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWV 334
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+V + M++S +TPD ++++ LL C+ + A + E+KCR + T
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYN 394
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LIH LC D A ++M +GL P T+ L + K G ++A+ N M S
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 37/343 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA------ 128
+ +LDS CK+GRV A E + +E + P YN+L+NG + ++ A
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQE--RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEE 275
Query: 129 ---------------------------ERFWL--EMRKENVTPNVVTYGTLVEGYCRLRR 159
E F L EM P + TY TL+ G C+ +
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQ 335
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
V +M K P+ + +N+++ G G E + + + PT++TY +
Sbjct: 336 VTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNT 395
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G C G L+ A ++ K M +G P TY K G V A + +M+ G
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PDR Y+ + K +A + +EM G D+ T + +H LC+ F+EA
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
E+M+ GL+P ++T+ + + F K G A+++ N M S
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLS 558
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV YN +L+ + + V A EM++ PN VTY LV G + +++A L
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++EM G+ +A YN +I+G + G F E ++E + PT+ TY +L+ G CK
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ G M+ F P ++N + + G + +A L+ ++ P +T
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+ LC LD A+++ KEM +G D+ T T+L++ ++ A F +M+
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 347 RRGLVP 352
+GL P
Sbjct: 453 SKGLKP 458
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 145/302 (48%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL SLC QG+ A E +P V YN +++G+F+ +V A + E
Sbjct: 151 YNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 210
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P++VTY ++V C+ R +D+A +++M + + PN YN +I G G+
Sbjct: 211 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 270
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++E + + P +VT + L+ CK G ++ A + M +G P +YN
Sbjct: 271 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 330
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
++ G + D +L+ M+ G PD T+++ +K LD A+ + EM+ G
Sbjct: 331 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHG 390
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T +I LCR+ K D+A +F MI +G+ P + L F G+ Q
Sbjct: 391 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQ 450
Query: 375 KL 376
+
Sbjct: 451 GI 452
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 135/304 (44%), Gaps = 9/304 (2%)
Query: 72 ASLFEILLDSLCKQGRVKAASEY--FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
A+L + C G A + + R + + +PT Y IL++ R+ + A
Sbjct: 38 AALARAPSSAACGSGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELAL 97
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDG 188
F+ ++ + + + + L++G+C +R D A+ ++ E G P+ YN ++
Sbjct: 98 AFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKS 157
Query: 189 LVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
L G+ + M E VC P +V Y +++ G+ K GD+ A + K M+ RG
Sbjct: 158 LCNQGKSGQADNLLRMMAEGGTVCS--PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG 215
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TYN K ++ A R+M+ P+ TY+ L+ + A+
Sbjct: 216 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 275
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+V KEM+ D+ T +ML+ LC+ K EA F+ M +G P ++ + + +
Sbjct: 276 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 335
Query: 365 KKRG 368
+G
Sbjct: 336 ATKG 339
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 153/340 (45%), Gaps = 12/340 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDS-GASLFEILLDSLCKQGRVK 89
+S TF I++R AG A L++++ S A + ++ C +GRV+
Sbjct: 114 LSTTTFNIMLRHLCTAGKPVRA---------LELLRQMPSPNAVTYNTVIAGFCARGRVQ 164
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN-VTPNVVTYG 148
A E + +E AP Y +++GW + V+DA + + EM E V PN V Y
Sbjct: 165 AGIEIMREMRE-RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYN 223
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ GYC ++ A+R EM G+ YN + L GR E ++E
Sbjct: 224 ALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEK 283
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P TY L+ GYCK G + A K+ ++M+ +G + TY S G V++
Sbjct: 284 GLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQET 343
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
L+ + G PD Y+ L+ C +D A ++ EM+ + D T L+
Sbjct: 344 DRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRG 403
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LC + + DEA E+M +RG+ P +++ L + +G
Sbjct: 404 LCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKG 443
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 2/234 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K A + IL++ CK+G+ K A + F + + TV Y L++ V
Sbjct: 283 KGLAPDAFTYNILINGYCKEGKEKKAMKMFEVM--VGKGIRATVVTYTSLIHALSMKGMV 340
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
++ +R + + + + P++ Y L+ +C +DRA ++ EM K+ I P+ + YNT+
Sbjct: 341 QETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTL 400
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ GL GR +E G++E P +V+Y +L+ GY GD++ A K+ M+ +GF
Sbjct: 401 MRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGF 460
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
P+ TYN + G+ DA +L ++M+ +G TPD TY L++ L ED+
Sbjct: 461 NPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 155/337 (45%), Gaps = 8/337 (2%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
G PD K T+ +I + + G VE A F+ + + A ++ L+ C
Sbjct: 177 GGIAPD---KYTYATVISGWCKVGKVEDATKVFD---EMLTEGKVEPNAVMYNALIGGYC 230
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
QG ++ A Y + + +D+ + TV YN+ ++ F +A EM ++ + P+
Sbjct: 231 DQGNLEVALRY--RGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPD 288
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
TY L+ GYC+ + +A+++ + M +GI + Y ++I L G +E +
Sbjct: 289 AFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFN 348
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P + Y +L+ +C GD++ A +I+ M + P TYN R G
Sbjct: 349 DAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLG 408
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++++A L +M + G PD ++Y+ L+ + + A++V EM +G + L T
Sbjct: 409 RLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYN 468
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+I LC + +A ++M+ G+ P T+ L
Sbjct: 469 AMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISL 505
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 110/248 (44%), Gaps = 37/248 (14%)
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR-KEGIEPNAIVYNTVIDGLVE 191
LE+ ++ +PN VTY T++ G+C RV I +++EMR + GI P+ Y TVI G +
Sbjct: 136 LELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCK 195
Query: 192 AGRFEEVSGMMERFLV-CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G+ E+ + + + L + P V Y +L+ GYC G+LE A + M+ RG +
Sbjct: 196 VGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVA 255
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN F G+ +A L +M E G PD TY+IL
Sbjct: 256 TYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNIL-------------------- 295
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
I+ C+ K +A FE M+ +G+ +T+ L +GM
Sbjct: 296 ---------------INGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMV 340
Query: 371 ALAQKLCN 378
+L N
Sbjct: 341 QETDRLFN 348
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL-PSPTTYNYFFRYFSKFGKVEDA 268
P P VTY +++ G+C G ++ +I++ M RG + P TY + K GKVEDA
Sbjct: 143 PSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDA 202
Query: 269 MNLYRKMIESGYT-PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
++ +M+ G P+ + Y+ L+ C + L++A++ EM RG + + T + +H
Sbjct: 203 TKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVH 262
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
L + EA A E+M +GL P T+ L + + K G A K+ VM
Sbjct: 263 TLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVM 315
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 167/360 (46%), Gaps = 19/360 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++R Y G A+ E ++ N A L+ I+L LCK G+ K A +
Sbjct: 1699 TYSTIVRGYCEDGETRQALALLEHMKKAEVPAN----AKLYNIILTHLCKHGKEKEALDL 1754
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H S AP + YNIL+N + ++DA+ M+ ++VTY TL+ G
Sbjct: 1755 LHSMAT--TSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGL 1812
Query: 155 CRLR----RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
CR RV+RA RL +EM +G P ++ Y VID L+ E+ +++ L+ E
Sbjct: 1813 CRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLD--LMHEN 1870
Query: 211 GPT--MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
G +VTY L+ + KAG ++ A + M +RG +P TYN F K GKVE+A
Sbjct: 1871 GCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEA 1930
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
L+ +M G P+ TY + K ++ A EM+ G +D + LI
Sbjct: 1931 NKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALIST 1989
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT----ALAQKLCNVMSSVP 384
+C++ K +M+ +G P+ +TF + + K T + Q+L SS P
Sbjct: 1990 ICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSPP 2049
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 12/309 (3%)
Query: 76 EILLDSLCKQGRVKAASEYF---HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+I++D L V+ ++F H R + T +N LL + K A +
Sbjct: 1629 DIVVDVLNHARDVEPTIQFFEWCHGR----HGYTHTAFAFNRLLEFLVNKRQYKRAHQML 1684
Query: 133 L-EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ E + + N TY T+V GYC +A+ L++ M+K + NA +YN ++ L +
Sbjct: 1685 IAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCK 1744
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ +E ++ P + TY L+ CK G LE A +++MM +R T
Sbjct: 1745 HGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVT 1804
Query: 252 YNYFFRYFSKFG----KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
YN + G +VE A L+ +M++ G+TP +TY +++ L + + A +V
Sbjct: 1805 YNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVL 1864
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M GC DL T MLI+ + D+A F +M RG +P +T+ + D F K
Sbjct: 1865 DLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKA 1924
Query: 368 GMTALAQKL 376
G A KL
Sbjct: 1925 GKVEEANKL 1933
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 8/371 (2%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ + A+A+E ++++ H++ ++ K + I++ A VE I FE+ +
Sbjct: 1594 LAISAEAQELLEILETEMEEVREHKLREYCGKLSTDIVVDVLNHARDVEPTIQFFEWCHG 1653
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ A F LL+ L + + K A + + S+ Y+ ++ G+
Sbjct: 1654 R---HGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESK-PSSFQANAFTYSTIVRGYCE 1709
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ A M+K V N Y ++ C+ + A+ L+ M P+
Sbjct: 1710 DGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYT 1769
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD----LEGASKIL 237
YN +I+ L + GR E+ G++E E +VTY +L+ G C+ G+ +E A ++
Sbjct: 1770 YNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLF 1829
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M+ +G P+ TY + E A + M E+G D +TY++L+ K
Sbjct: 1830 EEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKA 1889
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+D A+ + EM RGC D+ T ++ C+ K +EA+ F +M RG+ P+ T+
Sbjct: 1890 GMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTY 1949
Query: 358 KRLNDEFKKRG 368
+ D K G
Sbjct: 1950 TSITDACLKAG 1960
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 6/290 (2%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+F + A + ++ C+ G + A K+ + ++YNI+L +
Sbjct: 1691 SSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEV--PANAKLYNIILTHLCKHGKE 1748
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K+A M + P++ TY L+ C++ R++ A LV+ M+ + + YNT+
Sbjct: 1749 KEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTL 1808
Query: 186 IDGLVEAG----RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
I GL G R E + E + PT VTYT ++ + E A K+L +M
Sbjct: 1809 IHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMH 1868
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
G TYN F+K G ++ AM+L+ +M G PD +TY+ ++ CK K++
Sbjct: 1869 ENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVE 1928
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
A ++ EMK RG + T T + + + +A A +M + GLV
Sbjct: 1929 EANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV 1978
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 13/218 (5%)
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT-----MVTYTSLVKGYCK 226
+ G A +N +++ LV +++ M L+ E P+ TY+++V+GYC+
Sbjct: 1654 RHGYTHTAFAFNRLLEFLVNKRQYKRAHQM----LIAESKPSSFQANAFTYSTIVRGYCE 1709
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+ A +L+ M + YN + K GK ++A++L M + PD T
Sbjct: 1710 DGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYT 1769
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM----YKFDEASAEF 342
Y+IL+ LCK +L+ A + + M+ R C D+ T LIH LCR ++ + A F
Sbjct: 1770 YNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLF 1829
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
E+M+ +G P +T+ + D + M AQK+ ++M
Sbjct: 1830 EEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLM 1867
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 143/291 (49%), Gaps = 24/291 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVP-DFVSKDTFVI-LIRRYARAGMVEAAIWTFEF 58
+I L K + A L+ + + E P D V+ +T + L R+ VE A FE
Sbjct: 1773 LINALCKVGRLEDAQGLV-EMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFE- 1830
Query: 59 ANNLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKEL--DQSWAPTVRVYNIL 115
+MV + S+ + +++D+L RVK E K +L + A + YN+L
Sbjct: 1831 ----EMVDKGHTPTSVTYTVVIDALL---RVKM-DEQAQKVLDLMHENGCAFDLVTYNML 1882
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+N + ++ + A ++EM P+VVTY ++V+G+C+ +V+ A +L EM+ GI
Sbjct: 1883 INRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGI 1942
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
PN Y ++ D ++AGR ++ M + LV ++Y +L+ CK G +
Sbjct: 1943 FPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV-----DAISYVALISTICKLGKGK 1997
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
++L+ M+ +GF P+ T+N F SK +DA + +++ + +P
Sbjct: 1998 LGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSP 2048
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+DS CK+G++ A + K E+ TV Y+ L++G + ++ A+ + E
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEV--GIKATVYPYSSLISGHCKLGKLRAAKSLFDE 450
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PNVV Y +L+ GYC+ + A RL EM +GI PN + +I GL A R
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR 510
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P VTY L++G+CK G+ A ++L M+ +G +P TY
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+V +A + + + + LL CKE +LD A+ +EM RG
Sbjct: 571 LISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRG 630
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+DL ++LI+ + R + M +GL P + + + D K G +A
Sbjct: 631 VAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAF 690
Query: 375 KLCNVMSS 382
L ++M S
Sbjct: 691 GLWDIMVS 698
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 2/313 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+D L K+G + +A + +K K+ AP++ VYN L+N + + +AE + M
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKF--GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + PN VTY L++ +C+ ++D A+ + +M + GI+ Y+++I G + G+
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P +V YTSL+ GYCK G+L A ++ M +G P+ T+
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
++ +A L+ +M+E P+ +TY++L++ CKE A ++ EM +G
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVP 563
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
D T LI LC + EA D+ + + F L + K G A C
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDAC 623
Query: 378 NVMSSVPRSMELL 390
M +M+L+
Sbjct: 624 REMLGRGVAMDLV 636
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 43/394 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A A L + + + +P+ V T+ +LI + + G + FE +
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEV---TYNVLIEGHCKEG---NTVRAFELLD 554
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + K + L+ LC GRV A E+ + + Q ++ LL+G+
Sbjct: 555 EM-VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC--FSALLHGYC 611
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + DA EM V ++V Y L+ G R + I L+K+M +G+ P+ +
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y T+ID +AG + G+ + + P +VTYT+L+ G CK G ++ A + + M
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 731
Query: 241 IS----------------------------------RGFLPSPTTYNYFFRYFSKFGKVE 266
++ GFL + TYN R F K G+++
Sbjct: 732 LASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQ 791
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A + MI+SG +PD ++Y ++ C+ L AI++ + M RG + D LI
Sbjct: 792 EAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLI 851
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ C + +A +DM+RRG+ P+ T+ L
Sbjct: 852 YGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 145/302 (48%), Gaps = 3/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ CK+G A E + E + P Y L++G + V +A F +
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVE--KGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
++ E N + + L+ GYC+ R+D A+ +EM G+ + + Y+ +I G++
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++++ P V YT+++ KAG+L+ A + +M+S G LP+ TY
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G ++ A L R+M+ S P++ TY L L E ++ AIQ+ ++ G
Sbjct: 711 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEG 769
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T +LI C++ + EA+ +MI G+ P +++ + E+ +RG A
Sbjct: 770 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 829
Query: 375 KL 376
KL
Sbjct: 830 KL 831
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 160/372 (43%), Gaps = 12/372 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+S T+ + IR + +W NL K + + L+ LCK +A
Sbjct: 248 LSVATYNVFIRGLCK----NQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEA 303
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
E ++ E + P+ + L++G + N+ A +++K V P++ Y L
Sbjct: 304 GEEMMNEMIEF--GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ C+ ++D A L M +G+ PN + Y+ +ID + G+ + + +
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
T+ Y+SL+ G+CK G L A + MI+ G P+ Y + K G++ +A
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
LY +M G +P+ T+ L+ LC +++ A ++ EM + T +LI C
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHC 541
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME-- 388
+ A ++M+ +GLVP T++ L G + A++ N + + +
Sbjct: 542 KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEM 601
Query: 389 ----LLDSRCKD 396
LL CK+
Sbjct: 602 CFSALLHGYCKE 613
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 9/235 (3%)
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
DQ P +Y +++ ++ N+K A W M E PNVVTY L+ G C++ +D
Sbjct: 663 DQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMD 722
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTY 217
+A L +EM PN Y +D L G E+ ++E FL VTY
Sbjct: 723 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA-----NTVTY 777
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
L++G+CK G ++ A+++L MI G P +Y+ + + G +++A+ L+ M+
Sbjct: 778 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN 837
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
G PD + Y+ L+ C +L A ++ +M RG + T LIH C M
Sbjct: 838 RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 892
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 135/347 (38%), Gaps = 51/347 (14%)
Query: 73 SLFEILLDSLCK------QGRVKAASEYFHKRKELDQ----------SWAPTVRVYNILL 116
LFE LDS K G Y R+ELD P +R + +L
Sbjct: 128 GLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVL 187
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG R + + A + E+ + P+V Y +V C L+ RA ++ M G +
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD 247
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+ YN I GL + R E + + TY +LV G CK + E ++
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307
Query: 237 LKMMISRGFLPSPTT-----------------------------------YNYFFRYFSK 261
+ MI GF+PS YN K
Sbjct: 308 MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK 367
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
GK+++A +L+ M G P+ +TY IL+ CK KLD+A+ +M G +
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ LI C++ K A + F++MI GL P+ + + L + K G
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 147/383 (38%), Gaps = 63/383 (16%)
Query: 55 TFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNI 114
F N L + KNFD + F IL+ +L + AS + P
Sbjct: 76 ALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLN--P------- 126
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
G F E F RK N + + + L++ Y + RR + +V+ M G
Sbjct: 127 --EGLF--------ESFLDSYRKCNFS-TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCG 175
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I P + V++GL+ +F + + + P + YT++V+ C+ D A
Sbjct: 176 ILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAR 235
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM------------------------- 269
+++ M S G S TYN F R K +V +A+
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295
Query: 270 ----------NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDL 319
+ +MIE G+ P L+ L K+ + A + ++K G L
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 320 DTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
LI+ +C+ K DEA + F +M +GL P+ +T+ L D F KRG +A
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 380 MSSV-------PRSMELLDSRCK 395
M+ V P S L+ CK
Sbjct: 416 MTEVGIKATVYPYS-SLISGHCK 437
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS----LFEILLDSLCKQGRVKA 90
T+ ILIR + + G ++ A +V DSG S + ++ C++G +K
Sbjct: 776 TYNILIRGFCKLGRIQEAAEV--------LVNMIDSGISPDCISYSTIIYEYCRRGDLKE 827
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + + L++ P YN L+ G + + A +M + V PN TY +L
Sbjct: 828 AIKLWESM--LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885
Query: 151 VEGYCRLRRV 160
+ G C + V
Sbjct: 886 IHGTCLMSSV 895
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 170/350 (48%), Gaps = 8/350 (2%)
Query: 34 DTFVI--LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
D +V+ LI Y +G + AI + + FD+ + E L+ K K
Sbjct: 71 DIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLKYFKLV 126
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
++ + L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+
Sbjct: 127 WGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 184
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
GY RL ++ RL M G++P+ Y+ +I+GL + + ++ + + + LV
Sbjct: 185 NGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLI 244
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VT+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDL 304
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+M G PD+ TY L+ CKE LD A + K M +D T LI LC+
Sbjct: 305 IDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQ 364
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ +A +M+ GL P T+ + +EF K+G KL M
Sbjct: 365 EGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G K GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 10/281 (3%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE--ILLDSLCKQGRVKAASE 93
F IL+ R+ + G + A F+ + + S +L I L L + R+K+A
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAM- 203
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
L P V Y++L+NG + + DA + EM + + PN VT+ TL++G
Sbjct: 204 -------LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 256
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C+ RVD A+ + K+M + + P+ I YNT+I GL + G ++ +++ + P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
TY +L+ G CK GDL+ A + K MI Y + G+ DA + R
Sbjct: 317 KFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 376
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+M+ G PD TY +++ CK+ + ++ KEM+ G
Sbjct: 377 EMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+VK F L+D CK GRV A E + ++ L Q P + YN L+ G +
Sbjct: 239 LVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIY--KQMLSQCLLPDLITYNTLIYGLXKKG 296
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
++K A EM + + P+ TY TL++G C+ +D A K M +E I + + Y
Sbjct: 297 DLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYT 356
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
+I GL + GR + M+ L P TYT ++ +CK GD+ SK+LK M
Sbjct: 357 ALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRD 416
Query: 244 GFLPSPTTYN 253
G +PS TYN
Sbjct: 417 GHVPSVVTYN 426
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S + L+ + + G ++ A E + +E + W P T R +
Sbjct: 58 FATILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTRE-HKLWVPFDTCRK---V 113
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + K K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G E + L P + TY+ L+ G CK ++ A++
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE 233
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ L
Sbjct: 234 LFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLX 293
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L A + EM +G D T LI C+ D A + MI+ + +
Sbjct: 294 KKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 353
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 354 AYTALISGLCQEGRSVDAEKMLREMLSV 381
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%)
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+AS F E + + V + L+ + S ++DA + R+ + T
Sbjct: 53 SASAVFATILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRK 112
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++E +L+ +E+ + G + +N ++ + G + +
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P++V+Y +L+ GY + GDL ++ M++ G P TY+ K K++DA
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ G P+ +T+ L+ CK ++DLA+++ K+M + DL T LI+ L
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGL 292
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ +A ++M +GL P T+ L D K G
Sbjct: 293 XKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEG 331
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD ++ +T LI + G ++ A + + + M K + L+D CK+G
Sbjct: 279 LPDLITYNT---LIYGLXKKGDLKQA---HDLIDEMSM-KGLKPDKFTYXTLIDGCCKEG 331
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A E H+++ + ++ Y L++G + DAE+ EM + P+ T
Sbjct: 332 DLDTAFE--HRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRT 389
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
Y ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 156/307 (50%), Gaps = 2/307 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LLD LC++GR+K A E F R L+ AP Y L++G+ ++K ++ A+ E
Sbjct: 433 YTALLDGLCEEGRMKEAEEVF--RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 490
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+++ + P+++ YGT++ G C R++ A L+ E+++ GI NA++Y T++D ++G+
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++E L T VTY +L+ G CK+G ++ A M G P+ Y
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTA 610
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K E A L+ +M++ G PD++ Y L+ K L A+ + M G
Sbjct: 611 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++DL T LI L + +A ++MI +G++P + + L ++ G A
Sbjct: 671 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730
Query: 375 KLCNVMS 381
+L N M+
Sbjct: 731 ELQNEMA 737
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 186/424 (43%), Gaps = 44/424 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K + + A L PD V+ ++ LI + + G+++ I FE
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNS---LIDGHGKLGLLDECICIFEQMK 317
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ D D + L++ CK R+ A E+ H+ K P V Y+ ++ +
Sbjct: 318 DADC----DPDVITYNALINCFCKFERMPKAFEFLHEMKA--NGLKPNVVTYSTFIDAFC 371
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +++A +F+++MR+ +TPN TY +L++ C+ + A++LV+E+ + GI+ N +
Sbjct: 372 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 431
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL E GR +E + L P TYT+LV G+ KA ++E A ILK M
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491
Query: 241 ISRGFLP-----------------------------------SPTTYNYFFRYFSKFGKV 265
+ P + Y + K G+
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+A+ L +M++ G +TY L+ LCK + A+ M G ++ T L
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
+ LC+ F+ A F++M+ +G++P + + L D K G A L + M +
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671
Query: 386 SMEL 389
++L
Sbjct: 672 ELDL 675
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 162/361 (44%), Gaps = 39/361 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKEL--------------------------------- 101
+ I++D LCK+G ++ A F + KE
Sbjct: 258 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 317
Query: 102 DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
D P V YN L+N + + + + A F EM+ + PNVVTY T ++ +C+ +
Sbjct: 318 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 377
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
AI+ +MR+ + PN Y ++ID +AG E ++E L +VTYT+L+
Sbjct: 378 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 437
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G C+ G ++ A ++ + M++ G P+ TY F K ++E A ++ ++M E
Sbjct: 438 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 497
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD L Y +L LC E +L+ A + E+K G + + T L+ + + EA
Sbjct: 498 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 557
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS------SVPRSMELLDSRCK 395
E+M+ GL+ +T+ L D K G+ A MS +V L+D CK
Sbjct: 558 LEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617
Query: 396 D 396
+
Sbjct: 618 N 618
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 144/296 (48%), Gaps = 2/296 (0%)
Query: 71 GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER 130
G +F+ L +L + G ++ ASE F K ++ P R N LL+ + + +
Sbjct: 184 GFGVFDALFSALIELGMLEEASECFLKMRKF--RVFPKPRSCNALLHRLSKVGRGDLSRK 241
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ +M + +V TY +++ C+ ++ A L +M++ G P+ + YN++IDG
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ G +E + E+ + P ++TY +L+ +CK + A + L M + G P+
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ F F K G +++A+ + M TP+ TY L+ CK L A+++ +E+
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
G +++ T T L+ LC + EA F M+ G+ P+ T+ L F K
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 477
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 124/308 (40%), Gaps = 47/308 (15%)
Query: 101 LDQSWA------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
D WA P V++ L + +++A +L+MRK V P + L+
Sbjct: 171 FDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRL 230
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
++ R D + + K+M GI+ + YN +ID L
Sbjct: 231 SKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYL------------------------- 265
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
CK GDLE A + M GF P TYN K G +++ + ++ +
Sbjct: 266 ----------CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 315
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M ++ PD +TY+ L+ CK +++ A + EMK G ++ T + I C+
Sbjct: 316 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSME 388
EA F DM R L P+ T+ L D K G A A KL + +V
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435
Query: 389 LLDSRCKD 396
LLD C++
Sbjct: 436 LLDGLCEE 443
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 6/345 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + + FD+ + E L+ K K ++
Sbjct: 71 FSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLM----KLKYFKLVWGFY 126
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 127 EEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G P+ Y+ +I+GL + + + + + + LV P V
Sbjct: 185 RLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXV 244
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 304
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A K M +D T LI LC+ +
Sbjct: 305 SXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRS 364
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 365 VDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 2/326 (0%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA L+ N S +F L+ + + G ++ A E + E + W P +L
Sbjct: 54 FAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTXE-HKLWVPFDTCRKVL-E 111
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 112 HLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRP 171
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G +E + L P + TY+ L+ G CK ++GA+++
Sbjct: 172 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELF 231
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+
Sbjct: 232 DEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 291
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L A + EM +G D T T LI C+ D A + MI+ + + +
Sbjct: 292 GDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAY 351
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
L + G + A+K+ M SV
Sbjct: 352 TALISGLCQEGRSVDAEKMLREMLSV 377
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 8/298 (2%)
Query: 57 EFANNLDMVKN-----FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV 111
EF L+M+ F + L++ L K+G+V+ A + E S P + V
Sbjct: 312 EFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVS--PNIFV 369
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YN L++ + +N +AE + M K + PN VTY L++ +CR ++D A+ + EM
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
G++P+ YN++I+G + G +M + + PT+VTYTSL+ GYC G +
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A ++ M +G +PS T+ + G + DA+ L+ +M E P+R+TY++++
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ C+E + A + EM +G D + LIH LC + EA F D + +G
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV-FVDGLHKG 606
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 163/363 (44%), Gaps = 53/363 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ++I Y G + A FEF N + + K + L+ LC G+ A +
Sbjct: 544 TYNVMIEGYCEEGNMSKA---FEFLNEM-IEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 95 ---FHKRK-ELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
HK EL++ Y LL+G+ R +++A +M V ++V YG L
Sbjct: 600 VDGLHKGNCELNEI------CYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVL 653
Query: 151 VEGYCRLRRVDRAI--RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
++G L+ DR + L+KEM G++P+ ++Y ++ID + G F+E G+ + +
Sbjct: 654 IDG--SLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMM---------------------------- 240
P VTYT+++ G CKAG + A + M
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKK 771
Query: 241 -------ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
I +G L + TYN R F + G++E+A L +MI G +PD +TY ++
Sbjct: 772 AVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISE 831
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
LC+ + + AI++ M +G D LIH C + +A+ +M+R+GL P+
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPN 891
Query: 354 YLT 356
T
Sbjct: 892 TET 894
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 10/349 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
TF L+ RAG++ A+ F +M + N + ++++ C++G + A E
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFT-----EMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFE 563
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ ++ +++ P Y L++G + +A+ F + K N N + Y L+ G
Sbjct: 564 FLNEM--IEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+CR +++ A+ + ++M G++ + + Y +IDG ++ + G+++ P
Sbjct: 622 FCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPD 681
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
V YTS++ K GD + A I +MI+ G +P+ TY K G V +A L
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCS 741
Query: 274 KMIESGYTPDRLTYHILLKILCKE-DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
KM P+++TY L IL K + A+++ + +G + T MLI CR
Sbjct: 742 KMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI-LKGLLANTATYNMLIRGFCRQ 800
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+ +EAS MI G+ P +T+ + E +R A +L N M+
Sbjct: 801 GRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMT 849
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 137/304 (45%), Gaps = 35/304 (11%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR------------- 158
YN+L++G + + V +A ++ + + P+VVTY TLV G C+++
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEML 324
Query: 159 ----------------------RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+V+ A+ LVK + + G+ PN VYN +ID L + F+
Sbjct: 325 RLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFD 384
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E + +R P VTY+ L+ +C+ G L+ A L MI G PS YN
Sbjct: 385 EAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
KFG + A +L +MI P +TY L+ C + K++ A+++ EM +G
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIV 504
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T T L+ L R +A F +M + P+ +T+ + + + + G + A +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564
Query: 377 CNVM 380
N M
Sbjct: 565 LNEM 568
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 154/348 (44%), Gaps = 7/348 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEY 94
F +LI+ Y R+ V + F+ M K + LL L K A E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMM----MTKVSLLPEVRTLSALLHGLVKFRHFGLAMEL 214
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F ++ P V +Y ++ K++ A+ ++M N+V Y L++G
Sbjct: 215 FDDM--INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGL 272
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++V A+ + K++ + ++P+ + Y T++ GL + FE M++ L P+
Sbjct: 273 CKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSE 332
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+SLV+G K G +E A ++K + G P+ YN K ++A L+ +
Sbjct: 333 AAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDR 392
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M + G P+ +TY IL+ + C+ KLD A+ EM G + LI+ C+
Sbjct: 393 MGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGD 452
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
A + +MI + L P +T+ L + +G A +L + M+
Sbjct: 453 ISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 18/294 (6%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
L+ + R G +E A+ + DM ++ D + +L+D K K +
Sbjct: 618 LLHGFCREGKLEEALSVCQ-----DMGLRGVDLDLVCYGVLIDGSLKH---KDRKVFLGL 669
Query: 98 RKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
KE+ D+ P +Y +++ ++ + K+A W M E PN VTY ++ G C+
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 157 LRRVDRAIRLVKEMRKEGIEPNAIVYNTVID----GLVEAGRFEEVSGMMERFLVCEPGP 212
V+ A L +MR PN + Y +D G+ + + E+ + + L+
Sbjct: 730 AGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLL----A 785
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
TY L++G+C+ G +E AS+++ MI G P TY + V+ A+ L+
Sbjct: 786 NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELW 845
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
M E G PDR+ Y+ L+ C ++ A ++ EM +G + +TS I
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 63 DMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
DM++N + + I++ +LCK+ ++ A K +E P + YN L+ G
Sbjct: 348 DMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRE--NGCEPNIYTYNALIQGLCA 405
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ ++A M + V PN+ TY L G C+LRR+DRA + E G++PN +
Sbjct: 406 VRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVT 465
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YNT+++G R E +++ + P VTYT+L++G + L A ++ M
Sbjct: 466 YNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEME 525
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
++G+ + T N R ++ G +DA YR+M + G+ Y++ + L +++
Sbjct: 526 NKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEME 585
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A + EM +G +L T +I CR + D+A A MI G+ P ++ L
Sbjct: 586 EAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILI 645
Query: 362 DEFKKRGMTALAQKL 376
EF +G T A +L
Sbjct: 646 KEFHNQGRTQDADQL 660
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 193/421 (45%), Gaps = 54/421 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
MI +L +AK F LL + G E+ ++ + Y R+G + ++ F
Sbjct: 222 MIDILGRAKMFTELQSLLQKMQTQGREI----TRSMLHSFVMSYGRSGRFKESLEAF--- 274
Query: 60 NNLDMVKNFDSGA--SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
NL ++ G + + +L SL K ++ A F + ++ + Y ++
Sbjct: 275 -NLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQM--INNGVSCNNLTYTSMIQ 331
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+F + ++DA + +M + N P+VVTY ++ C+ + +++A ++++MR+ G EP
Sbjct: 332 CFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEP 391
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGAS 234
N YN +I GL R EE +E + E G P + TYT L G CK L+ A
Sbjct: 392 NIYTYNALIQGLCAVRRPEEA---LELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAK 448
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
++ ++RG P+ TYN + + ++ +AM++ ++M ++ TPD +TY L++ L
Sbjct: 449 EMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGL 508
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTML----------------------------- 325
+ ++L A+++ EM+ +G D++ DT +L
Sbjct: 509 VQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSA 568
Query: 326 ------IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNV 379
IH L + +EA A +MI +G P+ T+ + F ++G A + N
Sbjct: 569 SDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNF 628
Query: 380 M 380
M
Sbjct: 629 M 629
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 155/385 (40%), Gaps = 83/385 (21%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA-------- 52
MI+ ++ + A LL D I + PD V T+ I+I + M+E A
Sbjct: 329 MIQCFFLKEKMEDAMKLLDDMIQNNYAPDVV---TYTIVISALCKRKMIEQAYGVLQKMR 385
Query: 53 -------IWTFEF-----------ANNLDMVKNFDSGAS-----LFEILLDSLCKQGRVK 89
I+T+ L++V + G + IL LCK R+
Sbjct: 386 ENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLD 445
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E F++ L + P YN LLNG+ R + +A EM + + TP+ VTY T
Sbjct: 446 RAKEMFNE--ALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTT 503
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE------------------ 191
L++G + ++ A+R+ EM +G + N N + GL
Sbjct: 504 LIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRG 563
Query: 192 -----------------AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
AG EE ++ + P + TY +++KG+C+ G L+ A
Sbjct: 564 FAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDAD 623
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-- 292
+L MI G P +YN + F G+ +DA LY +E G ++L
Sbjct: 624 AMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERG---------VVLNPK 674
Query: 293 -ILCKEDKLDLAIQVSKEMKCRGCD 316
++ + D+L + S+E RGCD
Sbjct: 675 PVIQEPDELPEGLVRSQEELVRGCD 699
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 161/365 (44%), Gaps = 20/365 (5%)
Query: 2 IKVLAKAKEFDSAWCL---LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF 58
+ + KA E D CL L+ + PD V K V+ ++ A + A+ F++
Sbjct: 154 VNKICKAIEEDQWECLQDNFLNSMAQDLNPDAVVK---VLNLQTDA-----QNALRFFQW 205
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLN 117
A D + +D + ++D L GR K +E +++ Q T + + +
Sbjct: 206 A---DKQEGYDHNTDAYFTMIDIL---GRAKMFTELQSLLQKMQTQGREITRSMLHSFVM 259
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVV--TYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+ RS K++ + M++ P ++ Y +++ + +++D A L +M G+
Sbjct: 260 SYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGV 319
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
N + Y ++I + E+ +++ + P +VTYT ++ CK +E A
Sbjct: 320 SCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYG 379
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L+ M G P+ TYN + + E+A+ L M + G P+ TY IL LC
Sbjct: 380 VLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLC 439
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K +LD A ++ E RG + T L++ CR + EA ++M + P ++
Sbjct: 440 KLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHV 499
Query: 356 TFKRL 360
T+ L
Sbjct: 500 TYTTL 504
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 29/347 (8%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILL------DSLC 83
FVS +T + L+ + G V+ + N + K+ + AS +++ + +C
Sbjct: 101 FVSANTSLYLL--FCHVGAVDIYQRKYPTKNGFNPSKSLRAKASANALVVQQEDTVNKIC 158
Query: 84 K---QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF--WLEMRKE 138
K + + + + F D + V+V N+ + ++A RF W + ++E
Sbjct: 159 KAIEEDQWECLQDNFLNSMAQDLNPDAVVKVLNL-------QTDAQNALRFFQWAD-KQE 210
Query: 139 NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV 198
N Y T+++ R + L+++M+ +G E + ++ + +GRF+E
Sbjct: 211 GYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKES 270
Query: 199 SGMMERF-----LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+E F + EPG Y S++ K L+ A + MI+ G + TY
Sbjct: 271 ---LEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYT 327
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F K+EDAM L MI++ Y PD +TY I++ LCK ++ A V ++M+
Sbjct: 328 SMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMREN 387
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
GC+ ++ T LI LC + + +EA M + G+ P+ T+ L
Sbjct: 388 GCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTIL 434
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 151/293 (51%), Gaps = 10/293 (3%)
Query: 78 LLDSLCKQGRVKAASEYF----HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ LC+ +K A+E +K ELD YNI++ G + +++A +
Sbjct: 483 LIHGLCEGKNMKGATEVLRTMVNKGMELDNI------TYNIMIQGCCKDSKIEEALKLRD 536
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M ++ P+ + +++ YC L +++ A+ L+ +M+ EG++P+ + Y T+IDG +A
Sbjct: 537 DMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAK 596
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
++ + + + C P V Y +L+ GY + G++ GA +L M S G P+ TY
Sbjct: 597 DIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYC 656
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ G V++A ++ + ++ + Y I+++ LCK K+D A+ +EM+ R
Sbjct: 657 SLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSR 716
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ T T L++ C+ +EAS F++M+ G+VP +++ L F +
Sbjct: 717 SIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQ 769
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 147/284 (51%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K L++ + N L++G KN+K A M + + + +TY +++G C+
Sbjct: 467 KMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDS 526
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+++ A++L +M ++G +P+A ++N++I + G+ EE ++ + + P +V+Y
Sbjct: 527 KIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYG 586
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ GYCKA D++ A++ L +++ G P+ YN + + G + A+ + M
Sbjct: 587 TIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESI 646
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P +TY L+ +C +D A + ++ + ++ + T++I LC++ K DEA
Sbjct: 647 GIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEA 706
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
FE+M R + P+ +T+ L + K G A KL + M S
Sbjct: 707 MNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVS 750
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 12/325 (3%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV----KAASEY 94
L+ AR G + A F+ + K + ++ +LCK G+V K S+
Sbjct: 199 LLEALARTGNLGATCKVFDEMRD---CKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDL 255
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H + P YN+L++ +S V +A R M + V P++VT+G L+ G
Sbjct: 256 IHAGLQQSAGAVP----YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGL 311
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R R L++EM GI PN ++ N +ID G F E + + + E T
Sbjct: 312 KRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTA 371
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR-YFSKFGKVEDAMNLYR 273
VTY + + CK G++E A +IL+ M+S G +N + G++E + L
Sbjct: 372 VTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLIS 431
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M++ G P+ K LC+ + A+ + +M +G I++ TS LIH LC
Sbjct: 432 EMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGK 491
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFK 358
A+ M+ +G+ +T+
Sbjct: 492 NMKGATEVLRTMVNKGMELDNITYN 516
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 168/385 (43%), Gaps = 73/385 (18%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
+GA + +L+D+LCK GRV A + +E AP++ + IL+NG RS +
Sbjct: 264 AGAVPYNLLMDALCKSGRVDEAIRLKGRMEE--SRVAPSMVTFGILINGLKRSDRFGEVG 321
Query: 130 RFWLEMRKENVTPN-----------------------------------VVTYGTLVEGY 154
EM +TPN VTY +
Sbjct: 322 ALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARAL 381
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE-AGRFEEV----SGMMERFL--- 206
C+ ++RA R+++EM G+ ++ ++N+V+ GL++ GR E V S M++R +
Sbjct: 382 CKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPN 441
Query: 207 ----------VC----------------EPG--PTMVTYTSLVKGYCKAGDLEGASKILK 238
+C E G + T +L+ G C+ +++GA+++L+
Sbjct: 442 DALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLR 501
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+++G TYN + K K+E+A+ L MI G+ PD ++ ++ C
Sbjct: 502 TMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLG 561
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
K++ A+ + +MK G D+ + +I C+ +A+ +++ GL P+ + +
Sbjct: 562 KMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYN 621
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
L + + G + A + + M S+
Sbjct: 622 ALIGGYGRNGNISGAIGVLDTMESI 646
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 51/278 (18%)
Query: 140 VTPNVVTYGTLVE---------------------------GY---------CRLRRVDRA 163
+P+V T L+E GY C++ +VD
Sbjct: 189 ASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDG 248
Query: 164 IRLVKEMRKEGIEPN--AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
+++ ++ G++ + A+ YN ++D L ++GR +E + R P+MVT+ L+
Sbjct: 249 FKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILI 308
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
G ++ +L+ M G P+ N + + G +A+ L+ +M+
Sbjct: 309 NGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMK 368
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT-STMLIHLLCRMYKFDEASA 340
+TY+++ + LCKE +++ A ++ +EM G I ++++ LL R + +
Sbjct: 369 STAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVR 428
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+M++RG+ P ND MTA ++LC
Sbjct: 429 LISEMVKRGMKP--------NDAL----MTACTKQLCQ 454
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP-GPTMVTYTSLVKGYCKAGDLEGASK 235
P+ N +++ L G + + C+ P +YTS++K CK G ++ K
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFK 250
Query: 236 ILKMMISRGFLPSP--TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
IL +I G S YN K G+V++A+ L +M ES P +T+ IL+
Sbjct: 251 ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILING 310
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
L + D+ + +EM+ G + LI CR F EA F++M+ + +
Sbjct: 311 LKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKST 370
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+T+ + K G A+++ M S
Sbjct: 371 AVTYNLIARALCKEGEMERAERILEEMLST 400
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ AG+V+ A FE + + + G + I++ LCK G++ A Y
Sbjct: 654 TYCSLMHWMCHAGLVDEAKTMFEQSRK----NSIEVGVVGYTIMIQGLCKIGKMDEAMNY 709
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + +S P Y L+ + +S N ++A + + EM + P+ V+Y TLV G+
Sbjct: 710 FEEMR--SRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGF 767
Query: 155 CRLRRVDRAIRLVKEM 170
++ +D+AI E+
Sbjct: 768 SQVDSLDKAIEKAAEI 783
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 6/311 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI RAG ++ A + + K D A + +L+D CK G++ A +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMED----KGLDVDAVTYTVLIDGYCKVGKMTEA--F 445
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K + + P V Y L +G + +V A EM + + N+ TY +L+ G
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +++A+R + +M + G++P+ Y T+I L ++ + +++ L PT+
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ G+C +G +EG ++L+ M+ + P+ TTYN + + ++ +Y+
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ P+ TY+IL+K CK + A+ EM +G + + LI LL + K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 335 FDEASAEFEDM 345
F EA FE M
Sbjct: 686 FTEARRLFEKM 696
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI Y + G + A +N + K + L D LCKQG V AA+E
Sbjct: 427 TYTVLIDGYCKVGKMTEAF----LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H+ + + YN L+NG ++ N++ A R ++M + + P+V TY T++
Sbjct: 483 LHEM--CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + +DRA L++EM +GI+P + YN +++G +GR E ++E L P
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY SL+K YC +++ ++I K M+S+ +P+ TYN + K +++A+ + +
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
MIE G+ +Y+ L+++L K+ K A ++ ++M+
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 158/337 (46%), Gaps = 9/337 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ I++ Y +E AI + N + S+ +L D
Sbjct: 283 PDVV---TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ + LD + V+ +++G+ R ++ A ++ EM+K + + VTY
Sbjct: 340 VRVVEDMVMHGVVLDAA------VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G CR + A R+++EM +G++ +A+ Y +IDG + G+ E + + +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTYT+L G CK GD+ A+++L M S+G + TYN K G +E
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AM M E+G PD TY ++ LC+ +LD A + +EM +G + T +L++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
C + + E M+ + + P+ T+ L ++
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A++F ++ C++G + AA +F + ++ + A Y L+NG R+ +K+AER
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQK--RGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM + + + VTY L++GYC++ ++ A + +M ++ + PN + Y + DGL +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 192 AGRFEEVSGMMERFLVCEPGP--TMVTYTSLVKGYCKAGDLEGASK-------------- 235
G + ++ +C G + TY SL+ G CKAG+LE A +
Sbjct: 473 QGDVCAANELLHE--MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 236 ---------------------ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+L+ M+ +G P+ TYN F G+VE L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E P+ TY+ L+K C E + ++ K M + + +T +LI C+
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 335 FDEASAEFEDMIRRG 349
EA +MI +G
Sbjct: 651 MKEALYFHSEMIEKG 665
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 40/337 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL +LC GR+K A + F + + P V Y I+++G+ ++ A + E
Sbjct: 256 YNILLKALCTAGRIKDAHQLFD-----EMASPPDVVTYGIMVHGYCTLSELETAIKLLSE 310
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK-------------------------- 168
M + N V Y +++ C +V A+R+V+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 169 ---------EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
EM+K G+ + + Y +I+GL AG +E +++ VTYT
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GYCK G + A + M+ + P+ TY K G V A L +M G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ TY+ L+ LCK L+ A++ +M G D+ T T +I LC+ + D A
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ ++M+ +G+ P +T+ L + F G ++L
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 46/287 (16%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
L +R+ ++P+ + ++ CRL +D A++L +E+ E N YN ++ L
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELP----EKNTCSYNILLKALC 264
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AGR ++ + + + P P +VTY +V GYC +LE A K+L M +RG +P
Sbjct: 265 TAGRIKDAHQLFDE--MASP-PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321
Query: 251 TYNYFFRYFSKFGKVEDAM-----------------------------------NLYRKM 275
Y G+V DA+ N + +M
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G D +TY L+ LC+ +L A +V +EM+ +G D+D T T+LI C++ K
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
EA M+++ + P+ +T+ L+D K+G A +L + M S
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 8/338 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG-ASLFEILLDSLCKQGRVKAASEY 94
F+ L++ Y++ G E F + K +S +L+DS Q +
Sbjct: 204 FINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDS--NQVDLVRKLLL 261
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT-PNVVTYGTLVEG 153
+ KR + + P V ++NIL+ R ++ A EMR + PNV+TY TL++G
Sbjct: 262 YAKRSLV---YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDG 318
Query: 154 YCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
CR R+ A L +EM K+ I P+ + YN +I+G G+ + ++E P
Sbjct: 319 LCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCP 378
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ Y++LV G CKAG L+ A +L M S G P TY +FS+ G++++A+ L
Sbjct: 379 NVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELL 438
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M E+ D +T++++L LC+E + D A+ + +++ +G ++ + ++++ L +
Sbjct: 439 TEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQN 498
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ +A+ M+ RG VPHY T L K GM
Sbjct: 499 CELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMA 536
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 171/355 (48%), Gaps = 17/355 (4%)
Query: 21 KIGGHE--VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN----------F 68
K G HE F+S T ++R + + + +N +D+V+ +
Sbjct: 213 KCGFHEKVFDAFLSIQT---IVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVY 269
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDA 128
+F IL+ C++G + +A E + + S+ P V Y+ L++G R+ +K+A
Sbjct: 270 KPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSY-PNVITYSTLMDGLCRNGRLKEA 328
Query: 129 ERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
+ EM K+ + P+ +TY L+ G+CR + DRA +++ M+ G PN Y+ ++D
Sbjct: 329 FELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVD 388
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL +AG+ ++ G++ P +TYTSL+ + + G ++ A ++L M
Sbjct: 389 GLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQA 448
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
T+N + G+ ++A+++ K+ + G ++ +Y I+L L + +L A ++
Sbjct: 449 DTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLL 508
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
M RG TS L+ LC+ ++A+ D++ G P + +++ L D
Sbjct: 509 GLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLID 563
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 39/310 (12%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F IL++ + R G +++A FE + K + L+D LC+ GR+K A E F
Sbjct: 276 FNILVKYHCRRGDIDSA---FEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELF 332
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFR------SKNV------------------------ 125
+ DQ P YN+L+NG+ R ++NV
Sbjct: 333 EEMVSKDQ-IVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLC 391
Query: 126 -----KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+DA+ EM+ + P+ +TY +L+ + R ++D AI L+ EM++ + + +
Sbjct: 392 KAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTV 451
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N ++ GL GRF+E M+E+ +Y ++ + +L A+K+L +M
Sbjct: 452 TFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLM 511
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+SRGF+P T N K G DA +++ G+ P ++ +L+ ++C++ KL
Sbjct: 512 LSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKL 571
Query: 301 DLAIQVSKEM 310
++ E+
Sbjct: 572 LYVFELLDEL 581
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 6/311 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI RAG ++ A + + K D A + +L+D CK G++ A +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMED----KGLDVDAVTYTVLIDGYCKVGKMTEA--F 445
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K + + P V Y L +G + +V A EM + + N+ TY +L+ G
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +++A+R + +M + G++P+ Y T+I L ++ + +++ L PT+
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ G+C +G +EG ++L+ M+ + P+ TTYN + + ++ +Y+
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ P+ TY+IL+K CK + A+ EM +G + + LI LL + K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 335 FDEASAEFEDM 345
F EA FE M
Sbjct: 686 FTEARRLFEKM 696
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI Y + G + A +N + K + L D LCKQG V AA+E
Sbjct: 427 TYTVLIDGYCKVGKMTEAF----LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H+ + + YN L+NG ++ N++ A R ++M + + P+V TY T++
Sbjct: 483 LHEM--CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + +DRA L++EM +GI+P + YN +++G +GR E ++E L P
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY SL+K YC +++ ++I K M+S+ +P+ TYN + K +++A+ + +
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
MIE G+ +Y+ L+++L K+ K A ++ ++M+
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 158/337 (46%), Gaps = 9/337 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ I++ Y +E AI + N + S+ +L D
Sbjct: 283 PDVV---TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ + LD + V+ +++G+ R ++ A ++ EM+K + + VTY
Sbjct: 340 VRVVEDMVMHGVVLDAA------VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ G CR + A R+++EM +G++ +A+ Y +IDG + G+ E + + +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTYT+L G CK GD+ A+++L M S+G + TYN K G +E
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
AM M E+G PD TY ++ LC+ +LD A + +EM +G + T +L++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
C + + E M+ + + P+ T+ L ++
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A++F ++ C++G + AA +F + ++ + A Y L+NG R+ +K+AER
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQK--RGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM + + + VTY L++GYC++ ++ A + +M ++ + PN + Y + DGL +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 192 AGRFEEVSGMMERFLVCEPGP--TMVTYTSLVKGYCKAGDLEGASK-------------- 235
G + ++ +C G + TY SL+ G CKAG+LE A +
Sbjct: 473 QGDVCAANELLHE--MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 236 ---------------------ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+L+ M+ +G P+ TYN F G+VE L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E P+ TY+ L+K C E + ++ K M + + +T +LI C+
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 335 FDEASAEFEDMIRRG 349
EA +MI +G
Sbjct: 651 MKEALYFHSEMIEKG 665
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 40/337 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL +LC GR+K A + F + + P V Y I+++G+ ++ A + E
Sbjct: 256 YNILLKALCTAGRIKDAHQLFD-----EMASPPDVVTYGIMVHGYCTLSELETAIKLLSE 310
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK-------------------------- 168
M + N V Y +++ C +V A+R+V+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 169 ---------EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
EM+K G+ + + Y +I+GL AG +E +++ VTYT
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GYCK G + A + M+ + P+ TY K G V A L +M G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ TY+ L+ LCK L+ A++ +M G D+ T T +I LC+ + D A
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ ++M+ +G+ P +T+ L + F G ++L
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 46/287 (16%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
L +R+ ++P+ + ++ CRL +D A++L +E+ E N YN ++ L
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELP----EKNTCSYNILLKALC 264
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AGR ++ + + + P P +VTY +V GYC +LE A K+L M +RG +P
Sbjct: 265 TAGRIKDAHQLFDE--MASP-PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321
Query: 251 TYNYFFRYFSKFGKVEDAM-----------------------------------NLYRKM 275
Y G+V DA+ N + +M
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G D +TY L+ LC+ +L A +V +EM+ +G D+D T T+LI C++ K
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
EA M+++ + P+ +T+ L+D K+G A +L + M S
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 138 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 194 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L LC+E + A ++ +EM
Sbjct: 314 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ + S ++M R G VP +T
Sbjct: 374 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 125 --EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T L LC+ +
Sbjct: 303 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 144/310 (46%), Gaps = 2/310 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F L+ + + G ++ A E + +E + W P +L + + K K F+
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRKVLEH-LMKLKYFKLVWGFYE 125
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G + G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+E + L P + TY+ L+ G CK ++ A+++ M+ +G +P+ T+
Sbjct: 186 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 245
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 305
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G D T T LI C+ D A + MI+ + + + L + G + A
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDA 365
Query: 374 QKLCNVMSSV 383
+K+ M SV
Sbjct: 366 EKMLREMLSV 375
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 209
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 210 ------------------SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLI 277
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 159/311 (51%), Gaps = 41/311 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F+
Sbjct: 51 IIEILGRALKLNHARCILLDMPKKGLEWD---EDMWVLMIDSYGKAGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF++++ ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYDALFKVIM----RRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG +R K + +AE++++EM+ N+ P VV+Y
Sbjct: 164 GKVDTANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL +AG+ E +++ +
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVD 283
Query: 208 CEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P + L+ C+AG+L A+ +LK MI Y F K G+ +
Sbjct: 284 KYIAPKDNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHD 343
Query: 267 DAMNLYRKMIE 277
A+ L K+IE
Sbjct: 344 KAVKLLDKLIE 354
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + ++ V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ + + E E P +VTY +++ G + ++ A
Sbjct: 145 GIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ +Y + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM-LIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC K+ A + KEM + ++ M LI C A+ + MIR +
Sbjct: 265 LCDAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKAGQHDKAVKLLD 350
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RALKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GRF + L PT T+ L+ G+ +G ++ A++ + M
Sbjct: 117 SYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + K+++A + +M P ++Y L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDKYIAP 288
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HGAKTSEHALQFFRWVE-RSNLFEHNRDTHLKIIEILGRALKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID +AG +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKV+ A + M +PD +TY+
Sbjct: 130 RFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K+D A + EMK R + + + T LI + + D+A E+M
Sbjct: 190 TMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEMKGY 249
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRS----MELLDSRCK 395
G+ P+ +T+ L G + AQ + M P+ M L+ S+C+
Sbjct: 250 GIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCE 303
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 23/305 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ D A ++ G + P VS + LI+ Y V+ A+ E
Sbjct: 191 MINGCYRVKKMDEAEKYFVEMKGRNIEPTVVS---YTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC G++ A ++ +D+ AP ++ L++
Sbjct: 248 GYGIKPN----AITYSTLLPGLCDAGKMSEAQSIL--KEMVDKYIAPKDNSIFMRLISSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+ N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
EP+A YN +I+ L G+ + ++ + L + T L++G+ + G
Sbjct: 362 QSTLHMEPSA--YNPMIEYLCNNGQTAKAEALVRQLLKLGVQDSTALNT-LIRGHSQEGS 418
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD +
Sbjct: 419 PDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALGSMIENDHLPDSSLFRS 478
Query: 290 LLKIL 294
+++ L
Sbjct: 479 VMESL 483
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 163/309 (52%), Gaps = 14/309 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKQGIVQESVKLFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+++L ++GR A YF+K L + PT +N+L+ G+F
Sbjct: 108 ELGVERTLKSYDALFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRXXFNVLIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ ++P+VVTY T++ GY R+++++ A + EM+ IEP +
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V + ++ + E P +TY++L+ G C A + A ILK M
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFSK---FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R + G ++ A ++ + MI + Y +L++ CK
Sbjct: 282 VDKYL--APTDNSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKX 339
Query: 298 DKLDLAIQV 306
+ D A+++
Sbjct: 340 GQYDQAVKL 348
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C D AS + MIR +
Sbjct: 265 LCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGVLIENFCKXGQYDQAVKLLD 350
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT + L+ G+ +G +E A++ + M
Sbjct: 117 SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + L P
Sbjct: 237 DDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAP 288
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 25/295 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLXEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC ++ A ++ +D+ APT ++ L+
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEKMSEARSIL--KEMVDKYLAPTDNSIFMRLITSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
S ++ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CTSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKRNEPADAKAALDSMIENDHLPD 472
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 14/293 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R B T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKTSEHALQFFRWVE-RSNLFEHBRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E + ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ +N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRC 394
G+ P+ +T+ L N E + L + + ++ S M L+ S+C
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQC 302
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRJAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + ++M R G VP +T+ L
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVL 428
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 --EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQ 414
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGLCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 228 MDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 346 ENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 406 GXKLLKEMQRDGHVPSVVTYNVLM 429
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 6/312 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNILLNGWFRSKNVKDAERF 131
+F L+ + + G ++ A E + +E + W P T R +L + K K F
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRK---VLEHLMKLKYFKLVWGF 129
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G +E + L P + TY+ L+ G CK ++ A+++ M+ +G +P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D T T LI C+ D A + MI+ + + + L + G +
Sbjct: 310 VKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSV 369
Query: 372 LAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 370 DAEKMLREMLSV 381
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 215
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 216 ------------------SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLI 283
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + L+D CK+G + +A E H+++ + ++ Y L++G +
Sbjct: 310 VKGLKPDKITYTTLIDGCCKEGDLDSAFE--HRKRMIQENIRLDEVAYTALISGLCQEGR 367
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
DAE+ EM + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNV 427
Query: 185 VIDG 188
+++G
Sbjct: 428 LMNG 431
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 170/380 (44%), Gaps = 41/380 (10%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S TF LIR G + A+ F+ + F + L++ LCK G A
Sbjct: 123 STATFTTLIRGLCVEGKIGEALQLFDKMTG----EGFQPDVLTYGTLINGLCKVGNTSTA 178
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ ++ ++ PTV VY+ +++ + + + +A + +M + ++PN TY +L+
Sbjct: 179 IRFLRSMEQ--RNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEV------------- 198
G C L AIRL M I P+ + +NT++D L + G +
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK 296
Query: 199 -------SGMMERFLVCEPG---------------PTMVTYTSLVKGYCKAGDLEGASKI 236
S M L E G P++++YT+L+ GYCK ++ A +
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGL 356
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
+ M +G +P TYN G++ DA+ L+ +M+ G PD +TY IL LCK
Sbjct: 357 FEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK 416
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+L A+ + K ++ D D+ ++++ +CR + + A F + +GL P T
Sbjct: 417 NHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRT 476
Query: 357 FKRLNDEFKKRGMTALAQKL 376
+ + + ++G+ A A KL
Sbjct: 477 YTIMINGLCQQGLLAEASKL 496
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 143/309 (46%), Gaps = 7/309 (2%)
Query: 57 EFANNLDMVKNFDS-----GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV 111
++ L + K DS IL++S C R+ A +L + P+
Sbjct: 69 HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKL--GYQPSTAT 126
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+ L+ G + +A + + +M E P+V+TYGTL+ G C++ AIR ++ M
Sbjct: 127 FTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSME 186
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ P +VY+T+ID L + + E + L P TY+SL+ G C G +
Sbjct: 187 QRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWK 246
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A ++ MI R +P T+N K G V A + MI+S PD +TY+ L+
Sbjct: 247 EAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLM 306
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
C ++ + V M +GC + + T LI+ C++ D+A FE+M ++GL+
Sbjct: 307 DGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLI 366
Query: 352 PHYLTFKRL 360
P +T+ L
Sbjct: 367 PDTVTYNTL 375
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 145/291 (49%), Gaps = 39/291 (13%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW-FRSKNVKDAERFWL 133
F L+D+LCK+G V A ++ + P V YN L++G RS+ K F
Sbjct: 267 FNTLVDALCKEGMVVKA--HYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDT 324
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+RK V P+V++Y TL+ GYC+++ +D+A+ L +EM ++G+ P+ + YNT+I GL G
Sbjct: 325 MVRKGCV-PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 383
Query: 194 RFEEVSGMMERFLVCEPGPTMVT-----------------------------------YT 218
R + + +V P +VT Y+
Sbjct: 384 RLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYS 443
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ G C+AG+LE A + + S+G P TY + G + +A L+ +M E+
Sbjct: 444 IVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN 503
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
G +P+ TY+++ + + ++ AIQ+ +EM RG ID+ T+T+L+ +L
Sbjct: 504 GCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC G K A F+ + + P +N L++ + V A
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAM--IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV 289
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + ++ P+VVTY +L++G+C + + + + M ++G P+ I Y T+I+G +
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ G+ E P VTY +L+ G C G L A + M+ G +P TY
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F Y K ++ +AM L + + + PD Y I++ +C+ +L+ A + ++ +G
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T T++I+ LC+ EAS F +M G P+ T+ + F + T A
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529
Query: 375 KLCNVMSS 382
+L M S
Sbjct: 530 QLFQEMLS 537
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 115 LLNGWFRSKN-----VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKE 169
+++ F SK+ + DA + M + P++V + L+ R++ + L K+
Sbjct: 20 MISHAFHSKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQ 79
Query: 170 MRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
M GI N N +I+ R ++ L P+ T+T+L++G C G
Sbjct: 80 MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 139
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A ++ M GF P TY K G A+ R M + P + Y
Sbjct: 140 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYST 199
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ LCK+ +L A+ + +M +G + T + LIH LC + + EA F MI R
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++P LTF L D K GM A + +VM
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVM 290
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L A L + + ++PD V T+ IL + + A+ +
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLV---TYRILFDYLCKNHRLAEAMVLLKVIE 431
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N D ++ I++D +C+ G ++AA + F K + P VR Y I++NG
Sbjct: 432 G----TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS--KGLHPDVRTYTIMINGLC 485
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +A + + EM + +PN TY + G+ R RAI+L +EM G +
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVS 545
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFL 206
+++ L + G + V ++ F+
Sbjct: 546 TTTLLVEMLSDDGLDQSVKQILCEFV 571
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 4/280 (1%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR--LRRVDRAIR 165
TV+V+N ++ + RS DA + M + P++V++ TL+ + A+
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ E+R+ G+ P+ I YNT+I ++ E+ + E + E P + TY ++V +
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ G E A ++ ++ +GF+P TYN F+K G V+ + +++++G+ + +
Sbjct: 340 RCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEI 399
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ ++ + K +LDLA+ + EM+ GC D T T++I L +M K EA EDM
Sbjct: 400 TYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDM 459
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL--CNVMSSV 383
GL P + F L + K G A A+K C + S V
Sbjct: 460 ADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGV 499
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 159/363 (43%), Gaps = 38/363 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAI---WTF 56
M+ V A++ FD A LLD + + PD VS F LI +++G + A + F
Sbjct: 227 MMGVYARSGRFDDAR-QLLDTMHDRGIDPDLVS---FNTLINARSKSGCLAAGVALDLLF 282
Query: 57 E---------------FANNLDMVKNFDSGASLFEILLDSLCK------------QGRVK 89
E + N + ++FE ++ S C+ GR
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 90 AASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A E EL ++ + P YN LL + + NV E E+ K N +TY
Sbjct: 343 KAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYN 402
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T++ Y ++ R+D A+ L EMR G P+A+ Y +ID L + + E ++E
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADA 462
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
PT+V +++L+ Y K G A K MI+ G P Y F++ G+ E
Sbjct: 463 GLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKM 522
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT-STMLIH 327
+ LYR M+ Y PD Y +LL L KEDK + ++ ++M+ C + L ST+LI
Sbjct: 523 LRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELL-CQMSLGVISTILIK 581
Query: 328 LLC 330
C
Sbjct: 582 ARC 584
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 134/330 (40%), Gaps = 6/330 (1%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LI YA +G+ E A F+ + DS ++ +L GR+ +
Sbjct: 786 LIHAYAESGLYEKARAVFDNMIKTGPLPTVDS----VNGMMRALIVDGRLDELYVVVGEL 841
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
+++D + + + ++L+ + ++ +V + + + M+ PN+ Y ++ C
Sbjct: 842 QDMDFKISKSTVL--LMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHN 899
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
R ++ EM G +P+ ++N++++ AG F+ + + + L P TY
Sbjct: 900 RFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYN 959
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ YC++ E +L M RG P +Y +K E A L+ +M
Sbjct: 960 TLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSK 1019
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
Y +R YH+++KI A + MK G + + T +L+ + EA
Sbjct: 1020 SYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEA 1079
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ L L + + D + K G
Sbjct: 1080 ENVLNSLKSSSLEVSTLPYSTVFDAYLKNG 1109
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 163/377 (43%), Gaps = 31/377 (8%)
Query: 29 DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
D +S+ + ++L R+ + +I +E + M+K +L+E L+ L +
Sbjct: 639 DLISECSIILLCRK-------QTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELF 691
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A + F + + + +Y +++ + + + A + + + N+++
Sbjct: 692 SEACQVFCDMQFI--GIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCR 749
Query: 149 TLV-EGYCRLRRVDRAIRLVKEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
++ E Y ++ +A LVK +R+ GI+ ++N +I E+G +E+ + + +
Sbjct: 750 VIIIEAYGNIKLWQQAEILVKGLRQASGIDRR--IWNALIHAYAESGLYEKARAVFDNMI 807
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P PT+ + +++ G L+ ++ + F S +T F+K G V
Sbjct: 808 KTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVF 867
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-DLAIQVSKEMKCRGCDIDLDTSTML 325
+ M +Y M +GY P+ Y + +LC ++ D+ + ++ EM+ G DL L
Sbjct: 868 EVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIA-EMEGAGFKPDLSIFNSL 926
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN----------------DEFKKRGM 369
+++ FD + ++ ++ GL P T+ L +E KRG+
Sbjct: 927 LNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGL 986
Query: 370 TALAQKLCNVMSSVPRS 386
T Q +++++ ++
Sbjct: 987 TPKLQSYKSLLAASAKA 1003
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L+ Y ++A + M K G P N ++ L+ GR +E+ ++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQ 842
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ + T ++ + KAGD+ KI M + G+LP+ Y +
Sbjct: 843 DMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFR 902
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D + +M +G+ PD ++ LL + D QV + + G + D DT LI
Sbjct: 903 DVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLI 962
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ CR + +E +M +RGL P ++K L K + A +L M S
Sbjct: 963 VMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRS 1018
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 103/237 (43%), Gaps = 8/237 (3%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+++ + + V +++ M+ G PN +Y ++ L RF +V M+
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + + SL+ Y AG+ + +++ + ++ G P TYN + + + E+
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGF 975
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +M + G TP +Y LL K + + A Q+ +EM+ + ++ + H++
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRS----IYHMM 1031
Query: 330 CRMYKFDEASAEFEDMI----RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
++Y+ ++ E+++ G+ P T L + G A+ + N + S
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKS 1088
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P ++ Y LL +++ + A++ + EMR ++ N Y +++ Y +A L
Sbjct: 988 PKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENL 1047
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M+++GIEP + ++ AG+ E ++ + + Y+++ Y K
Sbjct: 1048 LAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLK 1107
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRL 285
GD + K L M G P + F R S + DA+ L + + + G+ P RL
Sbjct: 1108 NGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFDLPIRL 1167
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 10/375 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L KA W + + VPD T+ +I+ + + G V
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVY---TYTNVIKAHCKVGDVIKGKMVLS--- 266
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M K + + LC+ G V A E K+ +++ P Y +L++G+
Sbjct: 267 --EMEKECKPNLFTYNAFIGGLCQTGAVDEALEV--KKLMMEKGLGPDGHTYTLLVDGFC 322
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K K+A+ + M + PN TY L++G+ + ++ A+R+ EM G++ N +
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I G+ +AG + + L+ P TY L+ GY K+ D+ A ++L M
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+R PSP TY+ ++ A + +MI +G P+ Y L+K +E +
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++AI++ K M G DL LI LCR K +EA DM +G+ P+ T+
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF 562
Query: 361 NDEFKKRGMTALAQK 375
+ + K G +A++
Sbjct: 563 INLYSKSGEIQVAER 577
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 161/347 (46%), Gaps = 8/347 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI + + G +E A+ + +M+ + + ++ + K G + A
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKD-----EMITRGLKLNVVTYNAMIGGIAKAGEMAKAMS 402
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
F++ L P YN+L++G+ +S ++ A EM+ +TP+ TY L+ G
Sbjct: 403 LFNEM--LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C + +A ++ +M + G++PN +Y T+I V+ R+E +++ + P
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ Y L+ G C+A +E A +L M +G P+ TY F +SK G+++ A ++
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M+ SG P+ + Y IL+K C A+ K M +G D+ + +IH L +
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
K EA F ++ G+VP + L F K G A +L + M
Sbjct: 641 KTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 12/353 (3%)
Query: 14 AWCLLLDKIGGHEVPDFVSKD------TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
A C + D I G V + K+ T+ I + G V+ A+ L M K
Sbjct: 251 AHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEV----KKLMMEKG 306
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
+ +L+D CKQ R K A F P Y L++G+ + N+++
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS--SGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A R EM + NVVTY ++ G + + +A+ L EM GIEP+ YN +ID
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLID 424
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G +++ + ++ + P+ TY+ L+ G C + DL+ A+++L MI G P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ Y + + + + E A+ L + MI +G PD Y+ L+ LC+ K++ A +
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+M +G + T I+L + + A F+DM+ G+VP+ + + L
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 48/403 (11%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I A+AG + A+ F N ++ + + +L+D K + A E
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLF----NEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACEL 438
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K + P+ Y++L++G S +++ A +M + V PNV YGTL++ Y
Sbjct: 439 LAEMKA--RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM------------ 202
+ R + AI L+K M G+ P+ YN +I GL A + EE ++
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556
Query: 203 -------------------ERFL--VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKM 239
ER+ + G P V YT L+KG+C G+ A K
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ +G +P Y+ SK GK ++AM ++ K +++G PD Y+ L+ CKE
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLI--HLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
++ A Q+ EM G + ++ LI + C+ EA F++MI +G+ P +
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIY 736
Query: 358 KRLNDEFKKRGMTALAQKLCN-----VMSSVPRSMELLDSRCK 395
L D K G A L + + S+ L+DS CK
Sbjct: 737 CILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCK 779
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 183/432 (42%), Gaps = 52/432 (12%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
I + +K+ E A D + VP+ V + ILI+ + G A+ TF+
Sbjct: 563 INLYSKSGEIQVAERYFKDMLSSGIVPNNV---IYTILIKGHCDVGNTVEALSTFKCMLE 619
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
++ + + + ++ SL K G+ K A F K L P V +YN L++G+ +
Sbjct: 620 KGLIPDIRA----YSAIIHSLSKNGKTKEAMGVFLKF--LKTGVVPDVFLYNSLISGFCK 673
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVE--GYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++ A + + EM + PN+V Y TL+ GYC+ + A +L EM +GI P+
Sbjct: 674 EGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDG 733
Query: 180 IVYNTVIDGLVEAGRFEEV------------------SGMMERFLVCEPG---------- 211
+Y +IDG + G E+ + +++ F C+ G
Sbjct: 734 YIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSF--CKHGKVIEARELFD 791
Query: 212 --------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
P +VTYT L+ Y KA +E A ++ M +R +P+ TY +++ G
Sbjct: 792 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 851
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
++L++ M G D + Y ++ CKE K A+++ + G ++ D
Sbjct: 852 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 911
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS- 382
LI LC+ + +M + L T L F K G A K+ VM
Sbjct: 912 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 971
Query: 383 --VPRSMELLDS 392
VP S+ L DS
Sbjct: 972 GWVPTSLSLTDS 983
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 38/346 (10%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S ++F+I +D G + AS F + + + PT+ N L+ ++ +
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVF--IASISEGFFPTLICCNNLMRDLLKANMMGLFW 227
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ + M + + P+V TY +++ +C++ V + ++ EM KE +PN YN I GL
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGL 286
Query: 190 VEAGRFEEV----SGMMERFL-------------VCEP------------------GPTM 214
+ G +E MME+ L C+ P
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+L+ G+ K G++E A +I MI+RG + TYN +K G++ AM+L+ +
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ +G PD TY++L+ K + A ++ EMK R T ++LI LC
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A+ + MIR G+ P+ + L + + +A +L +M
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 71/192 (36%), Gaps = 34/192 (17%)
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
G + + + + G L AS + IS GF P+ N R K +
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWK 228
Query: 271 LYRKMIESGYTPDRLTYHILLKI----------------------------------LCK 296
+Y M+E+ PD TY ++K LC+
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQ 288
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+D A++V K M +G D T T+L+ C+ + EA FE M GL P+ T
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348
Query: 357 FKRLNDEFKKRG 368
+ L D F K G
Sbjct: 349 YTALIDGFIKEG 360
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 140/320 (43%), Gaps = 3/320 (0%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK--NFDSGASLFEILLDSLCKQGRVKAAS 92
TF IL+ +A ++ A+ F+ + LF L+D LCK G+ +
Sbjct: 318 TFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGL 377
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
+ K + P YN L++G+F++ N A + +M +E V PNV+T TLV+
Sbjct: 378 SLLEEMK-MGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVD 436
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C+ RV RA+ EM+ +G++ NA Y +I E L P
Sbjct: 437 GLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSP 496
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
V Y SL+ G C AG + AS ++ + GF + YN F K K+E L
Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M E+G PD +TY+ L+ L K A +V ++M G + T +IH C
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSK 616
Query: 333 YKFDEASAEFEDMIRRGLVP 352
DE F +M VP
Sbjct: 617 KNVDEGMKIFGEMCSTSKVP 636
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 10/279 (3%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F G L + L+ LC + A E H L A N LL R +++K
Sbjct: 243 FPDGFKLTQ-LVGKLCGDQKNGVAWEVLHCVMRL--GGAVDAASCNALLTWLGRGRDIKR 299
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE------GIEPNAIV 181
EM K + P+VVT+G LV C+ RR+D A+++ +R + G+EP+ ++
Sbjct: 300 MNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVL 359
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPG-PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+NT+IDGL + G+ E+ ++E + P VTY L+ G+ KAG+ + A ++ + M
Sbjct: 360 FNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQM 419
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ T N K G+V A+ + +M G + TY L+ C + +
Sbjct: 420 NEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNI 479
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ A+Q +EM GC D LI LC + ++AS
Sbjct: 480 NRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 7/281 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN------VTPNVVTYGTLVEGYCRLRRV 160
P+V + IL+N +++ + +A + + +R + V P+VV + TL++G C++ +
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373
Query: 161 DRAIRLVKEMRKEGIE-PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+ + L++EM+ I PN + YN +IDG +AG F+ + + P ++T +
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
LV G CK G + A + M +G + TY F + AM + +M+ SG
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+PD + Y+ L+ LC +++ A V ++K G +D +LI C+ K +
Sbjct: 494 CSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVY 553
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+M G+ P +T+ L K G A A K+ M
Sbjct: 554 ELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKM 594
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 159/362 (43%), Gaps = 10/362 (2%)
Query: 8 AKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
KE D L K+G P+ V T+ LI + +AG + A F N + N
Sbjct: 371 GKEEDGLSLLEEMKMGNINRPNTV---TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPN 427
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
+ L+D LCK GRV A E+F++ K + Y L++ + N+
Sbjct: 428 VIT----LNTLVDGLCKHGRVHRAVEFFNEMK--GKGLKGNAATYTALISAFCGVNNINR 481
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + + EM +P+ V Y +L+ G C R++ A +V +++ G + YN +I
Sbjct: 482 AMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLIS 541
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G + + E V ++ P +TY +L+ K GD ASK+++ MI G P
Sbjct: 542 GFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIE-SGYTPDRLTYHILLKILCKEDKLDLAIQV 306
S TY + V++ M ++ +M S P+ + Y+IL+ LC+ + +D AI +
Sbjct: 602 SVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISL 661
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++MK + + T ++ + +A + M+ P Y+T + L +
Sbjct: 662 MEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSA 721
Query: 367 RG 368
G
Sbjct: 722 VG 723
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S + +L+ CK+ +++ E + +E P YN L++ ++ + A +
Sbjct: 534 SCYNVLISGFCKKKKLERVYELLTEMEE--TGVKPDTITYNTLISYLGKTGDFATASKVM 591
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVE 191
+M KE + P+VVTYG ++ YC + VD +++ EM + PN ++YN +ID L
Sbjct: 592 EKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCR 651
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ +ME V P TY +++KG L A +++ M+ P T
Sbjct: 652 NNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYIT 711
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ S G++E + +S Y T
Sbjct: 712 MEVLTEWLSAVGEIEKLKHFVEGYQDSSYPASSQT 746
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 165/339 (48%), Gaps = 12/339 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGAS--LFEILLDS 81
G PD K T+ LI + + G +E A+ F+ +M+ + S ++ L+
Sbjct: 177 GGIAPD---KYTYATLISGWCKIGRMEDAVKVFD-----EMLTKGEVAPSAVMYNALIGG 228
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
C G++ A +Y + + + A TV YN+L++ F DA EM+K +
Sbjct: 229 YCDVGKLDVALQY--REDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFS 286
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+V TY L+ GYC+ +A+ + +EM ++G+ A+ Y ++I G+ +E +
Sbjct: 287 PDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ P +V Y +L+ +C GD+E A +I+ M + P TYN R F
Sbjct: 347 FNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCL 406
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G++++A L +M + G PD ++Y+ L+ + + A++V EM +G + L T
Sbjct: 407 LGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LI LC++ + D+A ++M+ +G+ P T+ L
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISL 505
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 145/298 (48%), Gaps = 2/298 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + ++ C +GRV+AA E + +E AP Y L++GW + ++DA +
Sbjct: 147 AVTYNTVIAGFCARGRVQAALEVMREMRE-RGGIAPDKYTYATLISGWCKIGRMEDAVKV 205
Query: 132 WLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ EM K V P+ V Y L+ GYC + ++D A++ ++M + GI YN ++ L
Sbjct: 206 FDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALF 265
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
R + ++E P + TY L+ GYCK G+ + A ++ + M +G +
Sbjct: 266 MDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAV 325
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY FS+ G+V++ L+ ++ G PD + Y+ L+ C ++ A ++ EM
Sbjct: 326 TYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEM 385
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ + D T L+ C + + DEA ++M +RG+ P +++ L + +G
Sbjct: 386 EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 12/241 (4%)
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVS 199
T+ ++ C + RA+ L+++M + PNA+ YNTVI G GR E +
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 200 GMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG-FLPSPTTYNYFFRY 258
M ER + P TY +L+ G+CK G +E A K+ M+++G PS YN
Sbjct: 172 EMRERGGI---APDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGG 228
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ GK++ A+ M++ G TY++L+ L + + A V +EM+ G D
Sbjct: 229 YCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPD 288
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
+ T +LI+ C+ +A FE+M ++G+ +T+ L F ++G +L N
Sbjct: 289 VFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFN 348
Query: 379 V 379
V
Sbjct: 349 V 349
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 6/311 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI RAG ++ A + + K D A + +L+D CK G++ A +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMED----KGLDVDAVTYTVLIDGYCKVGKMTEA--F 445
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K + + P V Y L +G + +V A EM + + N+ TY +L+ G
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +++A+R + +M + G++P+ Y T+I L ++ + +++ L PT+
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY L+ G+C +G +EG ++L+ M+ + P+ TTYN + + ++ +Y+
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ P+ TY+IL+K CK + A+ EM +G + + LI LL + K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 335 FDEASAEFEDM 345
F EA FE M
Sbjct: 686 FTEARRLFEKM 696
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI Y + G + A +N + K + L D LCKQG V AA+E
Sbjct: 427 TYTVLIDGYCKVGKMTEAF----LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H+ + + YN L+NG ++ N++ A R ++M + + P+V TY T++
Sbjct: 483 LHEM--CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ + +DRA L++EM +GI+P + YN +++G +GR E ++E L P
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY SL+K YC +++ ++I K M+S+ +P+ TYN + K +++A+ + +
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
MIE G+ +Y+ L+++L K+ K A ++ ++M+
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMR 697
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 169/365 (46%), Gaps = 14/365 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFA 59
++K L A A L D++ PD V T+ I++ Y +E AI E A
Sbjct: 259 LLKALCTAGRIKDAH-QLFDEMAS--PPDVV---TYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ + + ++ LC +G+V A + V+ +++G+
Sbjct: 313 -----ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM--VMHGVVLDAAVFTTVMSGF 365
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R ++ A ++ EM+K + + VTY L+ G CR + A R+++EM +G++ +A
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y +IDG + G+ E + + + P +VTYT+L G CK GD+ A+++L
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S+G + TYN K G +E AM M E+G PD TY ++ LC+ +
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
LD A + +EM +G + T +L++ C + + E M+ + + P+ T+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 360 LNDEF 364
L ++
Sbjct: 606 LMKQY 610
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A++F ++ C++G + AA +F + ++ + A Y L+NG R+ +K+AER
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQK--RGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM + + + VTY L++GYC++ ++ A + +M ++ + PN + Y + DGL +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 192 AGRFEEVSGMMERFLVCEPGP--TMVTYTSLVKGYCKAGDLEGASK-------------- 235
G + ++ +C G + TY SL+ G CKAG+LE A +
Sbjct: 473 QGDVCAANELLHE--MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 236 ---------------------ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+L+ M+ +G P+ TYN F G+VE L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E P+ TY+ L+K C E + ++ K M + + +T +LI C+
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 335 FDEASAEFEDMIRRG 349
EA +MI +G
Sbjct: 651 MKEALYFHSEMIEKG 665
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 40/329 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL +LC GR+K A + F + + P V Y I+++G+ ++ A + E
Sbjct: 256 YNILLKALCTAGRIKDAHQLFD-----EMASPPDVVTYGIMVHGYCTLSELETAIKLLSE 310
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK-------------------------- 168
M + N V Y +++ C +V A+R+V+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 169 ---------EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
EM+K G+ + + Y +I+GL AG +E +++ VTYT
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ GYCK G + A + M+ + P+ TY K G V A L +M G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ TY+ L+ LCK L+ A++ +M G D+ T T +I LC+ + D A
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ ++M+ +G+ P +T+ L + F G
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 46/287 (16%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
L +R+ ++P+ + ++ CRL +D A++L +E+ E N YN ++ L
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLP-LDEAVQLFQELP----EKNTCSYNILLKALC 264
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
AGR ++ + + + P P +VTY +V GYC +LE A K+L M +RG +P
Sbjct: 265 TAGRIKDAHQLFDE--MASP-PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321
Query: 251 TYNYFFRYFSKFGKVEDAM-----------------------------------NLYRKM 275
Y G+V DA+ N + +M
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ G D +TY L+ LC+ +L A +V +EM+ +G D+D T T+LI C++ K
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
EA M+++ + P+ +T+ L+D K+G A +L + M S
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++G+ + ++ A+ + + K + P+VV++ TL+ GY
Sbjct: 125 EEN--LECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+L ++ RL M+ G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I G PD++TY L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 9/306 (2%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVR 110
+W F + NL+ + + F IL+ K+G ++ A F + W P+V
Sbjct: 120 VWGF-YEENLEC--GYPASLYFFNILMHGFVKEGEIRLAQSVF----DAITKWGLRPSVV 172
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + ++ + R M+ V P+V TY L+ G C+ ++D A L EM
Sbjct: 173 SFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEM 232
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+G+ PN + + T+IDG + GR + + ++ L P ++TY +L+ G CK GDL
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++ MI +G P TY K G +E A ++MI+ D + Y L
Sbjct: 293 KQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 351 VPHYLT 356
P +T
Sbjct: 413 KPSVVT 418
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N++ +G + EG RL A + + K G+ P+ + +NT+++G ++ G E +
Sbjct: 140 NILMHGFVKEGEIRL-----AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P + TY+ L+ G CK ++ A+ + M+ +G +P+ T+ K
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITY 314
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T LI C+ + A + MI+ + + + L + G + A+K+ M S
Sbjct: 315 TTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 383 VPRSMEL 389
V E+
Sbjct: 375 VGLKPEI 381
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ G+ K G++ A + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS ++N + K G + + L M SG PD TY
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY----------------- 209
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 210 ------------------SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLI 277
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 191/398 (47%), Gaps = 29/398 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++++L K+F W L + H ++ + F ++ R Y++A + + AI +F N
Sbjct: 117 LVEILGSCKQFAILWDFLTEMRESHHYE--INSEIFWLIFRAYSQANLPDGAIRSF---N 171
Query: 61 NLDMVKNFDSGASLFEI--LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+D F ++ ++ LL LCK+ VK A + FH+ K ++ T + Y+IL++G
Sbjct: 172 RMD---EFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAK---NRFSLTAKTYSILISG 225
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
W + + A + M ++ +++ Y L++ C+ RVD A + +M + +EP+
Sbjct: 226 WGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPD 285
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A Y+ I +A + ++++ P + TY ++K CK +E A ++L
Sbjct: 286 AFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLD 345
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MISRG P +YN Y +V A+ L +M + PDR TY+++LK+L +
Sbjct: 346 EMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIG 405
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY-KFDEASAEFEDMIRRGLVPHYLTF 357
+ D +V + M + + T +++IH C+ K +EA FE MI G+ P+ T
Sbjct: 406 RFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTV 465
Query: 358 KRLNDEF--------------KKRGMTALA-QKLCNVM 380
+ L + K R T+ A Q+L N+M
Sbjct: 466 EMLRNRLLGLGFIDHIEILAAKMRQSTSYAIQELANIM 503
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 4/309 (1%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK-DAERFWLEM 135
+L D + + R+ + Y H EL + N++ R KN+ A RF+L
Sbjct: 42 LLPDLVNEISRLLSDHRYPHHDLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWA 101
Query: 136 RK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK-EGIEPNAIVYNTVIDGLVEAG 193
+ +V+++ LVE ++ + EMR+ E N+ ++ + +A
Sbjct: 102 KSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQAN 161
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ R PT+ L+ CK ++ A ++ +R F + TY+
Sbjct: 162 LPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNR-FSLTAKTYS 220
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + G E A +L++ M+E G D L Y+ LL+ LCK ++D A + +M +
Sbjct: 221 ILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSK 280
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ D T ++ IH C A + M R L+P+ T+ + + K A
Sbjct: 281 RVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEA 340
Query: 374 QKLCNVMSS 382
+L + M S
Sbjct: 341 YQLLDEMIS 349
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 184/361 (50%), Gaps = 22/361 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S +LF+ +L ++GR A YF+K L + P +N+++ G+F
Sbjct: 108 ELGVERTIKSYNALFKAIL----RRGRYMMAKRYFNKM--LSEGIEPARHTFNVMIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ ++P+VVTY T++ GY R+++++ A + EM+ IEP +
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G V + ++ ++E P +TY++L+ G C AG + A ILK M
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S G ++ A ++ + MI + Y +L++ CK
Sbjct: 282 MDKYL--APTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKA 339
Query: 298 DKLDLAIQ-----VSKEMKCR-GCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRG 349
+ D A++ + K++ R + L+ S +I LC + +A A +++ G
Sbjct: 340 GQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLG 399
Query: 350 L 350
+
Sbjct: 400 V 400
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L P T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC K EA + ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAP 288
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC G++ A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAGKMIEARSIL--KEMMDKYLAPTDNSIFMRLISSQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + L + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + Y+ + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L +K + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSAKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL 360
G+ P+ +T+ L
Sbjct: 250 GIKPNAITYSTL 261
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 11/303 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+D +C +G V A E R P+ YN +L G ++ DA+ E
Sbjct: 80 YNVLMDGMCGEGDVDDALELL--RNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTE 137
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +EN PN T+ ++ CR + +AI+L+++M K G N + YN +I+GL E
Sbjct: 138 MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN 197
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ G++ + P +VTY +L+KG C A A +++ M G LP T+N
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ + G + DA+ ++++M + G TP+ +TY ++ L K KLD A+++ EM +G
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR----GLVPHYLTFKRLNDEFKKRGMT 370
+ D + LL D+ E +R+ G+ PH + + + + G T
Sbjct: 318 FNPD-----KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKT 372
Query: 371 ALA 373
A
Sbjct: 373 EFA 375
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 152/330 (46%), Gaps = 40/330 (12%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L+ +LC++G+V+ A L + AP V YNILL + + + A
Sbjct: 7 AYTYNPLIHTLCERGQVRDALSVLDDM--LCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
MR E TPN VTY L++G C VD A+ L++ + G +P+ + YNTV+ GL
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 192 AGRFEEVSGMMERFL-----------------VCEPG------------------PTMVT 216
A R+ + ++ L +C G +VT
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y +++ G C+ +++GA +L M S G P TYN + + DA L M
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
++G PD +T++ L+ LC++ + AI+V K+M +GC + T + +I L + K D
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304
Query: 337 EASAEFEDMIRRGLVP---HYLTFKRLNDE 363
+A F +M +G P + L + LND+
Sbjct: 305 QALELFNEMGHKGFNPDKIYQLLAECLNDD 334
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P YN L++ V+DA +M P+VVTY L+E C+ R +A+ L
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ MR EG PN + YN ++DG+ G ++ ++ P+ V Y +++KG C
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
A A +++ M+ P+ T+N + G ++ A+ L KM + G T + +T
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ LC++ +D A+ + +MK GC D+ T L+ LC ++ +A ++M
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244
Query: 347 RRGLVPHYLTFKRLNDEFKKRGM 369
+ G +P +TF L ++G+
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGL 267
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N + F +++ SLC++G ++ A + K + + YN ++NG +NV
Sbjct: 141 ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK--HGCTANIVTYNAIINGLCEQRNV 198
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A +M+ P++VTY TL++G C R A L+ M + G P+ + +NT+
Sbjct: 199 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTL 258
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I L + G + + ++ P +TY++++ G KA L+ A ++ M +GF
Sbjct: 259 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 318
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P Y + +E+A+ RK+ +SG +P + Y+ +L LC+ K + AI
Sbjct: 319 NPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
+ M GC D T +LI L +EA
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 410
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
++PNA YN +I L E G+ + +++ L P +VTY L++ CK A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+++ +M + G P+ TYN G V+DA+ L R + G P + Y+ +LK L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C ++ A ++ EM C + T ++I+ LCR +A E M + G +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 355 LTFKRL 360
+T+ +
Sbjct: 183 VTYNAI 188
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 40/275 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ++I R G+++ AI E + N + + +++ LC+Q V A
Sbjct: 149 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT----YNAIINGLCEQRNVDGAMGL 204
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K K P + YN LL G + DAE M + P+ VT+ TL+
Sbjct: 205 LSKMKSY--GCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 262
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF------------------- 195
C+ + AI + K+M +G PN+I Y+T+I GL +A +
Sbjct: 263 CQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK 322
Query: 196 ---------------EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
EE + + P V Y +++ G C+ G E A I+ M
Sbjct: 323 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 382
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+S G +P TY + G + +A L K+
Sbjct: 383 VSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P TY L+ C+ G + A +L M+ RG P TYN K AM L
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M G TP+ +TY++L+ +C E +D A+++ + + GC ++ LC
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ +A +M+R P+ TF + ++G+ A +L MS
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 174
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 14/248 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIW--TFEF 58
+I L + + D A LL PD V+ +T + G+ AA W E
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLL--------KGLCSAARWVDAEEL 239
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+N+ + F L+ LC++G + A E F + D+ P Y+ +++G
Sbjct: 240 MDNMTQNGCLPDNVT-FNTLIGFLCQKGLMVDAIEVFKQMP--DKGCTPNSITYSTIISG 296
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++ + A + EM + P+ + Y L E ++ AI+ V++++ GI P+
Sbjct: 297 LAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPH 355
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++YN ++ GL G+ E +M + P +TY L++G G L A ++L
Sbjct: 356 TVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 415
Query: 239 MMISRGFL 246
+ SR L
Sbjct: 416 KLCSRDVL 423
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 172/358 (48%), Gaps = 37/358 (10%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T LI+ G V+ A+ F + L + + F + L++ +CK G
Sbjct: 131 PDTV---TLTTLIKGLCLKGQVKKAL---HFHDKL-LAQGFRLDQVSYGTLINGVCKIGE 183
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+AA + R+ + P V +YN +++ + K V +A + EM + ++ NVVTY
Sbjct: 184 TRAAIQLL--RRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTY 241
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ G+C + ++ A+ + EM + I P+ +YNT++D L + G+ +E ++ +
Sbjct: 242 SAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVK 301
Query: 208 CEPGPTMVTYTSLVKGY---------------------------CKAGDLEGASKILKMM 240
P ++TY +L+ GY CK +E A + K M
Sbjct: 302 TCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEM 361
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +P+ TYN K G++ A +L +M + G+ + +TY+ L+ LCK +L
Sbjct: 362 HQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQL 421
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIH-LLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D AI + +MK +G D+ T +L+H LLC+ + A F+D++ +G P+ T+
Sbjct: 422 DKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTY 479
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 162/318 (50%), Gaps = 15/318 (4%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I + G + A+ F N + ++K + ++ L+D+L K+G+VK A
Sbjct: 240 TYSAIIHGFCIVGKLTEALG---FLNEM-VLKAINPDVYIYNTLVDALHKEGKVKEAKNV 295
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P V YN L++G+ +K+V +A VTP+V +Y ++
Sbjct: 296 L--AVIVKTCLKPNVITYNTLIDGY--AKHVFNAVGLM------GVTPDVWSYNIMINRL 345
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+++RV+ A+ L KEM ++ + PN + YN++IDGL ++GR +++ +
Sbjct: 346 CKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANV 405
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR-YFSKFGKVEDAMNLYR 273
+TY SL+ G CK G L+ A ++ M +G P T N K ++++A L++
Sbjct: 406 ITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQ 465
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+++ GY P+ TY+I++ CKE LD A + +M+ GC + T ++I L
Sbjct: 466 DLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKG 525
Query: 334 KFDEASAEFEDMIRRGLV 351
+ D+A +MI RGL+
Sbjct: 526 ETDKAEKLLCEMIARGLL 543
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 16/328 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ C G++ A K L + P L+ G VK A F +
Sbjct: 101 LNILINCFCHLGQINLAFSVL--SKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDK 158
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + V+YGTL+ G C++ AI+L++ + EPN ++YNT+ID L +
Sbjct: 159 LLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKL 218
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + V +VTY++++ G+C G L A L M+ + P YN
Sbjct: 219 VSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNT 278
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GKV++A N+ ++++ P+ +TY+ L+ A V + G
Sbjct: 279 LVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLID--------GYAKHVFNAVGLMG 330
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ + ++I+ LC++ + +EA +++M ++ +VP+ +T+ L D K G + A
Sbjct: 331 VTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAW 390
Query: 375 KLCNVM------SSVPRSMELLDSRCKD 396
L + M ++V L++ CK+
Sbjct: 391 DLIDEMHDRGHHANVITYNSLINGLCKN 418
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 154/354 (43%), Gaps = 19/354 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQG 86
PDF T ILI + G + A ++K + L+ LC +G
Sbjct: 96 PDFF---TLNILINCFCHLGQINLAFSVLS-----KILKWGYQPDTVTLTTLIKGLCLKG 147
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+VK A +FH K L Q + Y L+NG + + A + + PNVV
Sbjct: 148 QVKKAL-HFHD-KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVM 205
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T+++ C+ + V A L EM +GI N + Y+ +I G G+ E G + +
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMV 265
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + Y +LV K G ++ A +L +++ P+ TYN ++K V
Sbjct: 266 LKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--HVF 323
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A+ L G TPD +Y+I++ LCK +++ A+ + KEM + + T LI
Sbjct: 324 NAVGLM------GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLI 377
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
LC+ + A ++M RG + +T+ L + K G A L N M
Sbjct: 378 DGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKM 431
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 116 LNGWFRSK-----NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
L+ F S+ NV DA + M TP ++ + +++ + +++ + L + +
Sbjct: 30 LHSHFHSRPPSFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRL 89
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+ I+P+ N +I+ G+ ++ + L P VT T+L+KG C G +
Sbjct: 90 ELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQV 149
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++++GF +Y K G+ A+ L R++ P+ + Y+ +
Sbjct: 150 KKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTI 209
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LCK + A + EM +G ++ T + +IH C + K EA +M+ + +
Sbjct: 210 IDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAI 269
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
P + L D K G A+ + V+
Sbjct: 270 NPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 245 FLPSPTT---YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
FLP+P+ +++F F V+DA+ + +M+ +TP + ++ +L K
Sbjct: 21 FLPNPSLPKLHSHFHSRPPSFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYP 80
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +S+ ++ + D T +LI+ C + + + A + +++ G P +T L
Sbjct: 81 TVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTL 139
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 169/370 (45%), Gaps = 45/370 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +L+R + AG ++AA+ + ++ S++ + +LCK G+V A E
Sbjct: 20 TYFVLVRAHCLAGELQAAM---DLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV--- 151
K D + P V +N L+ G ++ + +A++ EM + N+VTY TL+
Sbjct: 77 VKNMK--DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 152 -----------------------------EGYCRLRRVDRAIRLVKEMR-KEGIEPNAIV 181
G+C+ +DRA ++EM+ + G P+
Sbjct: 135 SSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFT 194
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFL----VCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
Y+ +I+GL ++ + +++ + C ++V + +LV GYCKA DL+ A ++L
Sbjct: 195 YSILINGLCKSSNLRKADELLQEMIGRKDCC---ASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ G P TY+ + G V+ L KM+ G PD +TY +L+ LCK
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K+ A ++ K M GC + T +++ LC++ K D A+ + +G + + F
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF 371
Query: 358 KRLNDEFKKR 367
+ L KKR
Sbjct: 372 EALLLSVKKR 381
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 141/292 (48%), Gaps = 12/292 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA D A +L + + V+ +T + + R+G EA +
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSG--EAVLVMQGMTT 152
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D + ++ CK G + A + + K+ +P Y+IL+NG
Sbjct: 153 TPD--------TQTYNAIIHGFCKSGEIDRAYGFLEEMKQ-RAGCSPDTFTYSILINGLC 203
Query: 121 RSKNVKDAERFWLEM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+S N++ A+ EM +++ +VV + TLV+GYC+ + +DRA L+ M + G P+
Sbjct: 204 KSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y+T+IDGL G ++ ++E+ + P +VTYT LV G CKAG + A +++K
Sbjct: 264 VTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKR 323
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
M+ G P+ TY+ F K K++ A +L + + G D + + LL
Sbjct: 324 MLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 16/316 (5%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ L K+ + A ++ + G PD V TF LI +AG ++ A +
Sbjct: 61 VHALCKSGKVPEAMEVVKNMKDGACKPDVV---TFNTLIAGLCKAGRLDEAQQVLDEMER 117
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
F + + L++ L GR A + P + YN +++G+ +
Sbjct: 118 ----SGFAANLVTYNTLINGLSSAGRSGEAVLVMQG-----MTTTPDTQTYNAIIHGFCK 168
Query: 122 SKNVKDAERFWLEMR-KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM--RKEGIEPN 178
S + A F EM+ + +P+ TY L+ G C+ + +A L++EM RK+ +
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC-AS 227
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ +NT++DG +A + ++ L P +VTY++++ G C+ GD++ +L+
Sbjct: 228 VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M+SRG P TY K GK+ +A L ++M+E G TP+ +TY ++ LCK D
Sbjct: 288 KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKID 347
Query: 299 KLDLAIQVSKEMKCRG 314
KLD+A + ++ +G
Sbjct: 348 KLDMANDLLTSIRDKG 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKM-IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY R G+++ AM+L R+M + G P Y+ + LCK K+ A++V K
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
MK C D+ T LI LC+ + DEA ++M R G + +T+ L + G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 370 TALAQKLCNVMSSVP 384
+ A + M++ P
Sbjct: 140 SGEAVLVMQGMTTTP 154
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 179/385 (46%), Gaps = 17/385 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ LA A D A L+ + + V+ + F ++R RAG V+ A FEF
Sbjct: 125 VVSALADAGRVDDAVALVHEMVAD----GVVAAEAFNPVLRAMLRAGDVKGAAKLFEFMQ 180
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+K A+ + +L+ L GR AA + + + P V Y +++G
Sbjct: 181 ----LKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMER--EGVVPGVMTYGAVVDGLV 234
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R VKDA + EM + + N Y T++ G+C+ +D A+++ + M + PN +
Sbjct: 235 RCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVV 294
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y+ +I GL G+ E + + + P ++TY S+++GY K GD A + + M
Sbjct: 295 LYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEM 354
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I G +P+ +Y+ G+++DAM +++ M++ G PD + Y ++K LC +
Sbjct: 355 IGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMV 414
Query: 301 DLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D +++ +M G D D+ + +L+ L A M+ +G P +T
Sbjct: 415 DGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNI 474
Query: 360 LNDEF---KKRG---MTALAQKLCN 378
EF +++G + L +LC+
Sbjct: 475 FLREFGAGERKGREFLEGLVVRLCD 499
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 9/276 (3%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFW---LEMRKE-----NVTPNVVTYGTLVEGYCRL 157
APT+ +N+LL S +D R+ L + E ++ P+ TY T+V
Sbjct: 73 APTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALADA 132
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
RVD A+ LV EM +G+ A +N V+ ++ AG + + + E + PT TY
Sbjct: 133 GRVDDAVALVHEMVADGVV-AAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATY 191
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
LV G G A +++ M G +P TY + G+V+DA + +M
Sbjct: 192 NVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMER 251
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G + Y ++ CK ++D A++V + M ++ + +I L K E
Sbjct: 252 NGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTE 311
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
A F +MI P+ +T+ + + K G T+ A
Sbjct: 312 AELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRA 347
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P TY+++V AG ++ A ++ M++ G + + +N R + G V+ A L
Sbjct: 117 PDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVAA-EAFNPVLRAMLRAGDVKGAAKL 175
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+ M G P TY++L+ L + A+ V + M+ G + T ++ L R
Sbjct: 176 FEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVR 235
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
+ +A E+M R GL + + + F K G A K+ M + P
Sbjct: 236 CGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASP 288
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 172/361 (47%), Gaps = 10/361 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHE-VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I D A +L D + + VPD + ++ LI Y + G+V A+
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS---LIYGYWKEGLVGLALEVLHDM 415
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N N S + IL+D CK G++ A ++ P +N L++ +
Sbjct: 416 RNKGCKPNVYS----YTILVDGFCKLGKIDEAYNVLNEMSA--DGLKPNTVGFNCLISAF 469
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + +A + EM ++ P+V T+ +L+ G C + + A+ L+++M EG+ N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+I+ + G +E ++ + +TY SL+KG C+AG+++ A + +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ G PS + N + G VE+A+ ++M+ G TPD +T++ L+ LC+ +
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ + + ++++ G D T L+ LC+ +A ++ I G VP++ T+
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 360 L 360
L
Sbjct: 710 L 710
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 169/348 (48%), Gaps = 13/348 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ++++ + +++A+ V N + +++ L+ SL K RV A +
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN----SVIYQTLIHSLSKCNRVNEALQL 274
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P +N ++ G + + +A + M P+ +TYG L+ G
Sbjct: 275 LEEM--FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
C++ RVD A L + K P +++NT+I G V GR ++ ++ +V G P
Sbjct: 333 CKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSD-MVTSYGIVP 387
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
+ TY SL+ GY K G + A ++L M ++G P+ +Y F K GK+++A N+
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
+M G P+ + ++ L+ CKE ++ A+++ +EM +GC D+ T LI LC +
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ A DMI G+V + +T+ L + F +RG A+KL N M
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 143/285 (50%), Gaps = 2/285 (0%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+G V A E H + ++ P V Y IL++G+ + + +A EM + + PN
Sbjct: 401 KEGLVGLALEVLHDMR--NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V + L+ +C+ R+ A+ + +EM ++G +P+ +N++I GL E + ++
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ VTY +L+ + + G+++ A K++ M+ +G TYN + + G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+V+ A +L+ KM+ G+ P ++ +IL+ LC+ ++ A++ KEM RG D+ T
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LI+ LCR + ++ F + G+ P +TF L K G
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 177/374 (47%), Gaps = 14/374 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+K + A LL + VPD + + ++ + ++ R EAA + N
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN--EAA----KMVN 311
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ +++ F + L++ LCK GRV AA + F++ + P + ++N L++G+
Sbjct: 312 RM-LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK------PEIVIFNTLIHGFV 364
Query: 121 RSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ DA+ +M + P+V TY +L+ GY + V A+ ++ +MR +G +PN
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
Y ++DG + G+ +E ++ P V + L+ +CK + A +I +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M +G P T+N + +++ A+ L R MI G + +TY+ L+ + +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ A ++ EM +G +D T LI LCR + D+A + FE M+R G P ++
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 360 LNDEFKKRGMTALA 373
L + + GM A
Sbjct: 605 LINGLCRSGMVEEA 618
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 32/295 (10%)
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
S PT + YN++L K A + +M + P + T+G +++ +C + +D A
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ L+++M K G PN+++Y T+I L + R E ++E + P T+ ++ G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK--------- 274
CK + A+K++ M+ RGF P TY Y K G+V+ A +L+ +
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF 356
Query: 275 ----------------------MIES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
M+ S G PD TY+ L+ KE + LA++V +M+
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+GC ++ + T+L+ C++ K DEA +M GL P+ + F L F K
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 2/227 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ LC+ +K A + R + + YN L+N + R +K+A + E
Sbjct: 497 FNSLISGLCEVDEIKHA--LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + +TY +L++G CR VD+A L ++M ++G P+ I N +I+GL +G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
EE + ++ P +VT+ SL+ G C+AG +E + + + + G P T+N
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+ K G V DA L + IE G+ P+ T+ ILL+ + ++ LD
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 13/219 (5%)
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM---ERFLVCEPGPTMVTYTS-- 219
RL+ +M+ EGI ++ +++ +AG + + +M CEP T +Y
Sbjct: 132 RLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEP--TFKSYNVVL 189
Query: 220 --LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
LV G C + A+ + M+SR P+ T+ + F +++ A++L R M +
Sbjct: 190 EILVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTK 245
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G P+ + Y L+ L K ++++ A+Q+ +EM GC D +T +I LC+ + +E
Sbjct: 246 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 305
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
A+ M+ RG P +T+ L + K G A+ L
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 137/256 (53%), Gaps = 2/256 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT-PNVVTYGTLVEGYCRLRRVDRAIR 165
P ++NIL+ +S +++ A EM+K + PNV+TY TL++G C R+ AI
Sbjct: 197 PNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIE 256
Query: 166 LVKEM-RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
L +EM K+ I P+A+ Y+ +I G G+ + +ME P + Y+ L+ G+
Sbjct: 257 LFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGF 316
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G LE A ++ M S G P Y F G++++AM L ++M E D
Sbjct: 317 CKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADA 376
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+T+++LLK LC+E + D A+++ + + G ++ + ++++ LC+ + +++ A
Sbjct: 377 VTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGL 436
Query: 345 MIRRGLVPHYLTFKRL 360
M+ RG VPHY T L
Sbjct: 437 MLSRGFVPHYATSNEL 452
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 140/280 (50%), Gaps = 2/280 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F IL+ CK G +++A E H+ K+ +S+ P V Y+ L++G + +K+A +
Sbjct: 201 IFNILVKHHCKSGDLESALEVMHEMKKSRRSY-PNVITYSTLIDGLCGNGRLKEAIELFE 259
Query: 134 EM-RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM K+ + P+ +TY L++G+C + DRA ++++ MR G +PN Y+ +++G +
Sbjct: 260 EMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKE 319
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR EE + + P V YT+L+ +C G ++ A ++LK M T+
Sbjct: 320 GRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTF 379
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + + G+ ++A+ + + G ++ +Y I+L LC++ +L+ + + M
Sbjct: 380 NVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLS 439
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
RG TS L+ LC D A + + G P
Sbjct: 440 RGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTP 479
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 130/247 (52%), Gaps = 3/247 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P+++ + LN SK + A++ L + + V PN + LV+ +C+ ++ A+
Sbjct: 161 PSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALE 220
Query: 166 LVKEMRKEGIE-PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-PTMVTYTSLVKG 223
++ EM+K PN I Y+T+IDGL GR +E + E + + P +TY+ L+KG
Sbjct: 221 VMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKG 280
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
+C G + A KI++ M S G P+ Y+ F K G++E+A ++ +M SG PD
Sbjct: 281 FCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPD 340
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+ Y L+ C ++D A+++ KEM C D T +L+ LCR +FDEA E
Sbjct: 341 TVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLE 400
Query: 344 DMIRRGL 350
++ G+
Sbjct: 401 NLAYEGV 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 41/344 (11%)
Query: 2 IKVLAKAKEFDSAW-CLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+ +L ++K+ D A CLL P+ F IL++ + ++G +E+A+ E +
Sbjct: 170 LNILVESKQIDLAQKCLLYVNEHLKVRPNTC---IFNILVKHHCKSGDLESAL---EVMH 223
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ----------------- 103
+ + + L+D LC GR+K A E F + DQ
Sbjct: 224 EMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCH 283
Query: 104 -----------------SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
P V Y++L+NG+ + +++A+ + EM+ + P+ V
Sbjct: 284 GGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVG 343
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ +C + R+D A+ L+KEM + + +A+ +N ++ GL GRF+E M+E
Sbjct: 344 YTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLA 403
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+Y ++ C+ G+LE + +L +M+SRGF+P T N + G V+
Sbjct: 404 YEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVD 463
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+A+ + + G+TP+ ++ L++ +C+E KL ++ E+
Sbjct: 464 NAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDEL 507
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKIL-KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + LVK +CK+GDLE A +++ +M SR P+ TY+ G++++A+
Sbjct: 197 PNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIE 256
Query: 271 LYRKMIESGYT-PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ PD LTY +L+K C K D A ++ + M+ GCD ++ ++L++
Sbjct: 257 LFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGF 316
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
C+ + +EA F++M GL P + G T L C V + +MEL
Sbjct: 317 CKEGRLEEAKEVFDEMKSSGLKPDTV------------GYTTLINCFCGV-GRIDEAMEL 363
Query: 390 L----DSRCK 395
L + +CK
Sbjct: 364 LKEMTEMKCK 373
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 18/339 (5%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF----EFANNLDMVKNFDSGAS 73
L D+I V+ F +L+ RYA A V+ AI F ++ LD+V
Sbjct: 148 LFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVG------- 200
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F+ILL SLC+ V+ A F ++K+ + P ++ +NI+LNGW ++ DA+R W
Sbjct: 201 -FQILLMSLCRYKHVEEAEALFLQKKD---EFPPVIKSWNIILNGWCVKGSLADAKRVWN 256
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ + P++ TYGT + + ++ A++L M ++GI P+ + N +ID L
Sbjct: 257 EIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKK 316
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R E + + TY +L+K +CK +E ++L M +G P+ TY+
Sbjct: 317 RIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYS 376
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
Y + K +D ++L ++M +SG D TY+++L + D V EM+
Sbjct: 377 YILKTTEK---PKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERN 433
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
G D + T+++H L K DEA + M RG+ P
Sbjct: 434 GSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTP 472
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 25/354 (7%)
Query: 32 SKDTFVILIRRY--ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ-GRV 88
SKD V I + +R G E A +FA+ +D +++L L KQ
Sbjct: 58 SKDVHVSEIVKILKSRDGDSELAEVLNQFADEMDE-----------DVVLKVLQKQRSNW 106
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT-- 146
K A +F L Q + R Y +L+ R K V+ + + E+ E+ +VVT
Sbjct: 107 KVALSFFKWAAGLPQ-YNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVES-RQSVVTNR 164
Query: 147 -YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+ L+ Y +V AI + + + G E + + + ++ L EE + F
Sbjct: 165 MFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEAL---F 221
Query: 206 LVC--EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L E P + ++ ++ G+C G L A ++ +I+ P TY F +K G
Sbjct: 222 LQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSG 281
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K+ A+ L+ M E G PD + ++ LC + ++ A+++ EM RGC D+ T
Sbjct: 282 KLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYN 341
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR-LNDEFKKRGMTALAQKL 376
LI C++ + ++ +DM +G+ P+ +T+ L K + + +L Q++
Sbjct: 342 TLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRM 395
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 162/315 (51%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + G+V+ ++ F+
Sbjct: 43 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEGIVQESVKMFQKME 99
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR YF+K R +
Sbjct: 100 ELGVERTIKSYNALFKVIL----RRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 155
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 156 GKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 215
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ G +PNAI Y+T++ GL A + E + MM+
Sbjct: 216 TTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 275
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 276 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKA 331
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 332 GQYDKAVKLLDKLIE 346
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R R +M E
Sbjct: 77 MMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSE 136
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E E E P +VTY +++ GY + +E A
Sbjct: 137 GIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 196
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 197 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPG 256
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +K+ A + KEM + D LI C+ D A+ + MIR +
Sbjct: 257 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 316
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 317 EAGHYGLLIENFCKAGQYDKAVKLLD 342
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A F W+E R N T+ ++E R +++ A ++
Sbjct: 7 VYNVL----HSSKTSEHAFHFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 61
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + G +E M ++ T+ +Y +L K + G
Sbjct: 62 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 121
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ M+S G P+ T+N F GKVE A+ + M +PD +TY+
Sbjct: 122 RYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYN 181
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 182 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 241
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 242 GTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 295
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 183 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 239
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
N A + LL LC ++ A ++ +D+ APT ++ L++
Sbjct: 240 GFGTKPN----AITYSTLLPGLCNAEKMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 293
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 294 CKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRP 353
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A +N +I+ L G+ + ++ + + + PT + +L++G+ + G
Sbjct: 354 QSTLHLEPSA--HNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALN--TLIRGHSQEG 409
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 410 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 469
Query: 289 ILLKIL 294
+++ L
Sbjct: 470 SVMESL 475
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ LCK G+ KAA E R+ + V +YN +++G + K V DA F+ E
Sbjct: 177 YRTLINGLCKVGQTKAALEML--RRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P VVTY TL+ G C + ++ AI L+ +M E I P ++ ++D + G+
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + + P +VTY SL+ GYC ++ A I M G P +Y+
Sbjct: 295 VKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSI 354
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K V++AM L+ +M PD +TY+ L+ LCK ++ A+++ EM RG
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++ T L+ LC+ + D+A + + P T+ L + K G AQ
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQ 474
Query: 375 KL 376
K+
Sbjct: 475 KV 476
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 136/257 (52%), Gaps = 2/257 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC G++K A HK + ++ PTV ++IL++ + + VK+A+ ++
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKM--ILENINPTVYTFSILVDAFCKEGKVKEAKNVFVV 304
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K++V PN+VTY +L+ GYC + V++A + M + G+ P+ Y+ +I G +
Sbjct: 305 MMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKM 364
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P +VTY SL+ G CK+G + A K++ M RG P+ TYN
Sbjct: 365 VDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNS 424
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K V+ A+ L K+ + P TY+IL+ LCK +L A +V +++ G
Sbjct: 425 LLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNG 484
Query: 315 CDIDLDTSTMLIHLLCR 331
+ID+ T +I C+
Sbjct: 485 YNIDVYTYNTMIKGFCK 501
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 162/338 (47%), Gaps = 22/338 (6%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDS-----GASLFEILLDSLCKQGRVKAASE 93
LI + G +AA L+M++ D ++ ++D +CK V A +
Sbjct: 180 LINGLCKVGQTKAA---------LEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFD 230
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
++ + + + PTV YN L+ G +KDA +M EN+ P V T+ LV+
Sbjct: 231 FY--SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDA 288
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG---LVEAGRFEEVSGMMERFLVCEP 210
+C+ +V A + M K+ ++PN + YN++++G + E + E + M + V
Sbjct: 289 FCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGV--- 345
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P + +Y+ ++ G+CK ++ A K+ + M + P TYN K G++ A+
Sbjct: 346 APDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALK 405
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L +M + G P+ +TY+ LL LCK +D AI++ ++K + T +LI+ LC
Sbjct: 406 LIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLC 465
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ + +A FED++ G T+ + F K+G
Sbjct: 466 KSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
IL++ + G + F L + + P L+ G ++ A F +
Sbjct: 107 LSILINCFSQLGHNSLSFSVF--SNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDK 164
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ N V+Y TL+ G C++ + A+ +++ + + + + ++YNT+IDG+ +
Sbjct: 165 VLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKL 224
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + PT+VTY +L+ G C G L+ A +L MI P+ T++
Sbjct: 225 VNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSI 284
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GKV++A N++ M++ P+ +TY+ L+ C ++++ A + M G
Sbjct: 285 LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ + +++I C++ DEA FE+M + + P +T+ L D K G + A
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYAL 404
Query: 375 KLCNVMS------SVPRSMELLDSRCKD 396
KL M ++ LLD+ CK+
Sbjct: 405 KLIGEMHDRGQPPNIITYNSLLDALCKN 432
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 6/231 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF IL+ + + G V+ A F M K+ + L++ C V A
Sbjct: 281 TFSILVDAFCKEGKVKEAKNVFVVM----MKKDVKPNIVTYNSLMNGYCLVNEVNKAESI 336
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F+ ++ AP V Y+I+++G+ + K V +A + + EM + + P+VVTY +L++G
Sbjct: 337 FNTMAQI--GVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ R+ A++L+ EM G PN I YN+++D L + ++ ++ + P++
Sbjct: 395 CKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSV 454
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
TY L+ G CK+G L+ A K+ + ++ G+ TYN + F K G V
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 145/346 (41%), Gaps = 10/346 (2%)
Query: 43 YARAGMVEAAIW-----TFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
++R+ V +++ F+F N + ++ F S +S V + + H+
Sbjct: 3 FSRSRFVAFSVFITNFPNFQFLNPIFLIHCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQ 62
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ P++ + +L ++ + +M + N+VT L+ + +L
Sbjct: 63 KNP-----TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQL 117
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
+ + + K+G EP+AI T+I GL G + ++ L V+Y
Sbjct: 118 GHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSY 177
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ G CK G + A ++L+ + + YN K V DA + Y +M+
Sbjct: 178 RTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVA 237
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
P +TY+ L+ LC +L AI + +M + + T ++L+ C+ K E
Sbjct: 238 KRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKE 297
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
A F M+++ + P+ +T+ L + + A+ + N M+ +
Sbjct: 298 AKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQI 343
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 174/385 (45%), Gaps = 53/385 (13%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LIR Y AG+ + ++ F+ + + + + SL ILL K+GR A + F
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILL----KRGRTGMAHDMF 199
Query: 96 H-----------------------KRKELDQSWA-----------PTVRVYNILLNGWFR 121
K +DQ++ P V YN +++G R
Sbjct: 200 DEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCR 259
Query: 122 SKNVKDAERFWLEMRKEN--VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ VK A M K+ V PN+V+Y TL+ GYC + +D A+ + EM G++PNA
Sbjct: 260 AGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNA 319
Query: 180 IVYNTVIDGLVEAGRFEEVSGMM---ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+ YNT+I GL EA R++E+ G + + F P T+ L+K +C AG L+ A K+
Sbjct: 320 VTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDA--CTFNILIKAHCDAGHLDAAMKV 377
Query: 237 LKMMISRGFLPSPTTYNYFFRYF---SKFGKVEDAMN-LYRKMIESGYT---PDRLTYHI 289
+ M++ P +Y+ R ++F K E N L+ K + G P Y++
Sbjct: 378 FQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNL 437
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
+ + LC K A +V +++ RG D + LI LCR KF A M+RR
Sbjct: 438 MFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLRRE 496
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQ 374
VP T++ L D K G LA
Sbjct: 497 FVPDPETYEVLIDGLLKIGEALLAH 521
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 40/323 (12%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEY-FHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
K F F ++L+ L + + AA + F K + R +N L+ + +
Sbjct: 97 KGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGL 156
Query: 125 VKDAERFWLEMRKENVTPNVV------------------------------------TYG 148
+++ + M+K ++P+V+ T+
Sbjct: 157 FQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFN 216
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-- 206
TL+ G+C+ VD+A + KEM P+ + YNT+IDGL AG+ + ++ L
Sbjct: 217 TLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKK 276
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +V+YT+L++GYC +++ A + M++RG P+ TYN + S+ + +
Sbjct: 277 ATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYD 336
Query: 267 DAMN-LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ L + ++PD T++IL+K C LD A++V +EM D + ++L
Sbjct: 337 EIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVL 396
Query: 326 IHLLCRMYKFDEASAEFEDMIRR 348
I LC +FD+A F ++ +
Sbjct: 397 IRTLCLRNEFDKAETLFNELFEK 419
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 141/375 (37%), Gaps = 95/375 (25%)
Query: 35 TFVILIRRYARAGMVEAAIWTFE----FANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
TF LI + + MV+ A F+ ++ N D+V + ++D LC+ G+VK
Sbjct: 214 TFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVT--------YNTIIDGLCRAGKVKI 265
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + + + P + Y LL G+ + + +A + EM + PN VTY TL
Sbjct: 266 AHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTL 325
Query: 151 VEG------------------------------------YCRLRRVDRAIRLVKEMRKEG 174
++G +C +D A+++ +EM
Sbjct: 326 IKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 385
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL------------------------VCEP 210
+ P++ Y+ +I L F++ + +C
Sbjct: 386 LHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCAN 445
Query: 211 GPTM-----------------VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
G +Y +L+ G C+ G + A ++L +M+ R F+P P TY
Sbjct: 446 GKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYE 505
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK----EDKLDLAIQVSKE 309
K G+ A + ++M+ S Y P T+H +L L K D L + V E
Sbjct: 506 VLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGL-LTVMLE 564
Query: 310 MKCRGCDIDLDTSTM 324
+ R +IDL T +
Sbjct: 565 KRIRQ-NIDLSTQAV 578
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 19/356 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEF 58
+IK L++A +D L IGG F S D TF ILI+ + AG ++AA+ F+
Sbjct: 325 LIKGLSEAHRYDEIKGFL---IGGDAFTTF-SPDACTFNILIKAHCDAGHLDAAMKVFQ- 379
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA----SEYFHKRKELDQS-WAPTVRVYN 113
L+M + DS + + +L+ +LC + A +E F K L ++ P YN
Sbjct: 380 -EMLNMKLHPDSAS--YSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYN 436
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++ + K AE+ + ++ K + +Y TL+ G CR + A L+ M +
Sbjct: 437 LMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLRR 495
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
P+ Y +IDGL++ G ++R L P T+ S++ K +
Sbjct: 496 EFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDS 555
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
+L +M+ + + R + E A + R + ++GY + LL
Sbjct: 556 FGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYL---IKMEELLDF 612
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
LC+ KL A + + +D+DT +I LC+ + EA + + +++ G
Sbjct: 613 LCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNELVELG 668
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N R + G ++++NL++ M + G +P LT++ LL IL K + +A + EM+
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203
Query: 312 -CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G D T LI C+ D+A F++M P +T+ + D + G
Sbjct: 204 RTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKV 263
Query: 371 ALAQKLCNVM 380
+A L N M
Sbjct: 264 KIAHNLLNGM 273
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 162/309 (52%), Gaps = 14/309 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y +AG+V+ ++ F
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLQWD---EDLWVLMIDSYGKAGIVQESVKLFHKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L + + S LF+++L ++GR A YF+K L + PT +NI++ G+F
Sbjct: 108 ELGVERTIKSYDVLFKVIL----RRGRYMMAKRYFNKM--LSEGIEPTRHTFNIMIWGFF 161
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S V+ A RF+ +M+ ++TP+V+TY T++ GY R+++++ A + EM+ IEP +
Sbjct: 162 LSGKVETAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+ T+I G V R ++ ++E P +TY++ + G C A + A LK M
Sbjct: 222 THTTLIKGYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEM 281
Query: 241 ISRGFLPSPTTYNYFFRYFS---KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ + +PT + F R S K G ++ A ++ + MI + Y +L++ CK
Sbjct: 282 VDKYI--APTDNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKA 339
Query: 298 DKLDLAIQV 306
+ D AI +
Sbjct: 340 VQYDKAISL 348
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 1/235 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + ++ V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 LMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E E + P ++TY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ T+ + + +V+DA+ L +M G P+ +TY L
Sbjct: 205 EKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
LC +K+ A KEM + D LI C+ D A+ + MIR
Sbjct: 265 LCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLKAMIR 319
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V +++L +M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ + ++ GR+ + L PT T+ ++ G+ +G +E A + + M
Sbjct: 117 SYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +T+ L+K D++
Sbjct: 177 KSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + + LC K EA + ++M+ + + P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAP 288
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 135/303 (44%), Gaps = 23/303 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V+ T LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTT---LIKGYVAVDRVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + L LC ++ A ++ +D+ APT ++ L++G
Sbjct: 248 GFGIKPN----AITYSTXLPGLCNAEKMSEARSXL--KEMVDKYIAPTDNSIFLRLISGQ 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ N+ A M + +V YG L+E YC+ + D+AI L+ ++ ++ I
Sbjct: 302 CKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
EP+A YN +I+ L G+ + ++ R L+ +L++G+ + G
Sbjct: 362 QSTSHMEPSA--YNPLIEYLCNNGQTAKAETLV-RQLMKLGVQDATALNTLIRGHSQEGS 418
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ A ++LK+M+ R + YN + + K + DA MIE+G+ PD + +
Sbjct: 419 PDSAFELLKIMLRRKXDSEKSAYNSLVQCYLKKSEPADAKTALDSMIENGHLPDSSLFRL 478
Query: 290 LLK 292
+++
Sbjct: 479 VME 481
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
VYN+L +G +S++ R W+Z R N T+ ++E R +++ A ++ +M
Sbjct: 15 VYNVL-HGAKKSEHALQFFR-WVZ-RSNLFEHNRETHLKIIEILGRASKLNHARCILLDM 71
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
K+G++ + ++ +ID +AG +E + + T+ +Y L K + G
Sbjct: 72 PKKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRY 131
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A + M+S G P+ T+N F GKVE A + M TPD +TY+ +
Sbjct: 132 MMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITYNTM 191
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ + K++ A + EMK R + + T T LI + + D+A E+M G+
Sbjct: 192 INGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEMKGFGI 251
Query: 351 VPHYLTF 357
P+ +T+
Sbjct: 252 KPNAITY 258
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 10/337 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD---SGASLFEILLDSLCKQGRVKAAS 92
F+++ + Y +A + E A+ F+ M F+ +G S F +L+ + ++G A
Sbjct: 128 FIVIFKAYGKAHLPEKAVDLFD-----RMACEFECKRTGKS-FNSVLNVIIQEGLFHRAL 181
Query: 93 EYF-HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E++ H S +P V +N+++ + V DA + + +M P+V TY TL+
Sbjct: 182 EFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLM 241
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C+ R+D A+ L+ EM+ +G P+ + +N +I+GL + G + +++ +
Sbjct: 242 DGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCI 301
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VTY +L+ G C G LE A +L M+S +P+ TY K G+ D +
Sbjct: 302 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACV 361
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M E GY + Y L+ L KE K A+ + KEM +G +++ + +I LCR
Sbjct: 362 LALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCR 421
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
K D+A +M +G P+ T L F + G
Sbjct: 422 DGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAG 458
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 33/378 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+P+ V+ +T LI G +E AI + + V N + + +++ L KQG
Sbjct: 301 IPNEVTYNT---LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVT----YGTIINGLVKQG 353
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R + +E + + VY+ L++G F+ ++A + EM + N +
Sbjct: 354 RALDGACVLALMEE--RGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIV 411
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +++G CR + D A+ ++ EM +G PNA ++++ G EAG + +
Sbjct: 412 YSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMA 471
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
V Y+ L+ G CK G ++ A + M+ +G P Y+ S G VE
Sbjct: 472 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVE 531
Query: 267 DAMNLYRKMIESG--YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
DAM LY +M+ G PD +TY+ILL LCK+ + AI + M RGCD DL T T+
Sbjct: 532 DAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTI 591
Query: 325 LIHLLCRMYKFDEASAEFED---------------------MIRRGLVPHYLTFKRLNDE 363
+ +L + EF D M+++ L P + T+ R+ +
Sbjct: 592 FLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVEN 651
Query: 364 F-KKRGMTALAQKLCNVM 380
K + + A+ QK +++
Sbjct: 652 LCKPKKVQAVIQKCWSIL 669
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%)
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I PN + +N VI + + G ++ + + + P + TY +L+ G CKA ++ A
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+L M G PSP T+N K G + A L M G P+ +TY+ L+ L
Sbjct: 255 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGL 314
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C + KL+ AI + M C ++ T +I+ L + + + + M RG +
Sbjct: 315 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNE 374
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
+ L K G + A L
Sbjct: 375 YVYSTLISGLFKEGKSQEAMHL 396
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 39/204 (19%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+ SL+ Y GD + K+L M + + F+ + K E A++L+ +M
Sbjct: 92 TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151
Query: 276 --------------------IESGY-------------------TPDRLTYHILLKILCK 296
I+ G +P+ LT+++++K +CK
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+D AIQV ++M R C+ D+ T L+ LC+ + DEA + ++M G P +T
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 271
Query: 357 FKRLNDEFKKRGMTALAQKLCNVM 380
F L + K+G + A KL + M
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNM 295
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 141 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRL 196
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 197 KSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 256
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + +R L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 257 NGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 316
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 317 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREML 376
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G P +T+ L
Sbjct: 377 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVL 425
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y G + AI + + FD+ + E L+ K K ++
Sbjct: 72 FSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM----KLKYFKLVWGFY 127
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 128 --EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G+ P+ Y+ +I+GL + + ++ + + + LV P V
Sbjct: 186 RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 245
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 246 TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 305
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD+ TY L+ CKE LD A + K M +D LI LC+ +
Sbjct: 306 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRS 365
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 366 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 411
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A+E F + L + P + L++G ++ V A +
Sbjct: 212 YSVLINGLCKESKMDDANELFDEM--LVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKR 269
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M +++ P+++TY TL+ G C+ + +A L+ EM +G++P+ Y T+IDG + G
Sbjct: 270 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 329
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +R + V Y +L+ G C+ G A K+L+ M+S G P TY
Sbjct: 330 LDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 389
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
F K G V L ++M +G+ P +TY++L+
Sbjct: 390 IINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 426
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 149/328 (45%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 55 FAAILETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTRE-HKLWVPFDTCRK---V 110
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + K K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 111 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 170
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G +E + L P + TY+ L+ G CK ++ A++
Sbjct: 171 RPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANE 230
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LC
Sbjct: 231 LFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLC 290
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L A + EM +G D T T LI C+ D A + MI+ + +
Sbjct: 291 KKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 350
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 351 AYAALISGLCQEGRSVDAEKMLREMLSV 378
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 124/279 (44%)
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+AS F E + + V++ L+ + + ++DA + R+ + T
Sbjct: 50 SASAVFAAILETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRK 109
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++E +L+ +E+ + G + +N ++ + G + +
Sbjct: 110 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 169
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P++V+Y +L+ GY + G L+ ++ M++ G LP TY+ K K++DA
Sbjct: 170 LRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDAN 229
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M+ G P+ +T+ L+ CK ++D A+++ K M + DL T LI+ L
Sbjct: 230 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
C+ +A ++M +GL P T+ L D K G
Sbjct: 290 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 328
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 37/195 (18%)
Query: 64 MVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
+VK F L+D CK GRV A E + ++ L QS P + YN L+ G +
Sbjct: 236 LVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIY--KRMLSQSLLPDLITYNTLIYGLCKKG 293
Query: 124 NVKDAERFWLEMR-----------------------------------KENVTPNVVTYG 148
++K A EM +EN+ + V Y
Sbjct: 294 DLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYA 353
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
L+ G C+ R A ++++EM G++P+ Y +I+ + G + S +++
Sbjct: 354 ALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRN 413
Query: 209 EPGPTMVTYTSLVKG 223
P++VTY L+ G
Sbjct: 414 GHAPSVVTYNVLMNG 428
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 176/383 (45%), Gaps = 10/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++K L +A + W L G PD + TF + + +A +AA FE
Sbjct: 216 LLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTF---LEAHCKARDFDAAKKVFEEMR 272
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D N + +++ LC+ G V+ A + K + +D +P Y L+NG
Sbjct: 273 RRDCAMN----EVTYNVMISGLCRSGAVEEA--FGFKEEMVDYGLSPDAFTYGALMNGLC 326
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +K+A+ EM + PNVV Y TLV+G+ + + A ++ EM G++PN I
Sbjct: 327 KGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKI 386
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+Y+ +I GL + G+ S ++ + P TY L++G+ + D +GA ++L M
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G LP+ TY + G+ ++A NL +MI G P+ Y L+ KE +
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
LA + + M DL LI L + + +EA + + +RGLVP T+ L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566
Query: 361 NDEF-KKRGMTALAQKLCNVMSS 382
+ K R + Q L +++S
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNS 589
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 3/288 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P V Y+ L ++++ A++ + EMR+ + N VTY ++ G CR V+ A
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+EM G+ P+A Y +++GL + GR +E +++ P +V Y +LV G+ K
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A IL MIS G P+ Y+ R K G++ A L +MI+ G+ PD T
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
YH L++ + D A ++ EM+ G + T ++I+ LC+ + EA E+MI
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSRC 394
GL P+ + L K G +LA C + ++ ++ L D C
Sbjct: 483 SEGLKPNAFMYAPLIIGHSKEGHISLA---CESLENMTKANVLPDLFC 527
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 169/371 (45%), Gaps = 57/371 (15%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+ LCK G++ AS+ ++ ++ P Y+ L+ G F+ + A
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHR--PDTFTYHPLMQGHFQHYDKDGAFELLN 444
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY----------- 182
EMR + PN TYG ++ G C+ A L++EM EG++PNA +Y
Sbjct: 445 EMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG 504
Query: 183 ------------------------NTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTM 214
N++I GL GR EE + + +R LV P
Sbjct: 505 HISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLV----PDE 560
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY+ L+ GYCK +LE A ++L+ M++ G P+ TY + K E ++ +
Sbjct: 561 FTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQS 620
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ SG PD Y I+++ L + + +++A V E++ G DL + LI LC+M
Sbjct: 621 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMAD 680
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV------PRSM- 387
++A ++M + GL P + + L D F + G + A+ NV S+ P +
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR---NVFDSILAKGLLPNCVT 737
Query: 388 --ELLDSRCKD 396
L+D CK+
Sbjct: 738 YTALIDGNCKN 748
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 182/411 (44%), Gaps = 45/411 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L + E A LL + I P+ + LI +++ G + A + E
Sbjct: 461 MINGLCQNGESKEAGNLLEEMISEGLKPNAF---MYAPLIIGHSKEGHISLACESLENMT 517
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+++ + + L+ L GR++ A EY+ + ++ + P Y+ L++G+
Sbjct: 518 KANVLPDL----FCYNSLIKGLSTVGRIEEAEEYYAQVQK--RGLVPDEFTYSGLIHGYC 571
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY-------------------------- 154
+++N++ A++ +M + PN TY L+EGY
Sbjct: 572 KTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNH 631
Query: 155 ---------CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
R ++ A ++ E+ K G+ P+ +Y+++I GL + E+ G+++
Sbjct: 632 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEM 691
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
P +V Y +L+ G+C++GD+ A + ++++G LP+ TY K G +
Sbjct: 692 AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDI 751
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA +LY+ M++ G PD Y++L L+ A+ +++EM RG + + L
Sbjct: 752 TDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTL 810
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ C+ + E M+ R +VP+ T + + EF K G A ++
Sbjct: 811 VRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRV 861
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 147/354 (41%), Gaps = 43/354 (12%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASE 93
T+ ++I R+G VE A F +MV A + L++ LCK GR+K A
Sbjct: 282 TYNVMISGLCRSGAVEEA-----FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKA 336
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ P V VY L++G+ + +A EM V PN + Y L+ G
Sbjct: 337 LLDEMS--CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRG 394
Query: 154 YCRLRRVDRAIRLVKEM-----------------------------------RKEGIEPN 178
C++ ++ RA +L+ EM R GI PN
Sbjct: 395 LCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPN 454
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
A Y +I+GL + G +E ++E + P Y L+ G+ K G + A + L+
Sbjct: 455 AYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLE 514
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M LP YN + S G++E+A Y ++ + G PD TY L+ CK
Sbjct: 515 NMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTR 574
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
L+ A Q+ ++M G + DT T L+ + ++ S+ + M+ G P
Sbjct: 575 NLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP 628
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 17/372 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I+ L K + A LL + I GH F + Y + G FE
Sbjct: 391 LIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDG-------AFELL 443
Query: 60 N---NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
N N ++ N A + I+++ LC+ G K A + + + P +Y L+
Sbjct: 444 NEMRNSGILPN----AYTYGIMINGLCQNGESKEAGNLLEEM--ISEGLKPNAFMYAPLI 497
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
G + ++ A M K NV P++ Y +L++G + R++ A +++K G+
Sbjct: 498 IGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLV 557
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ Y+ +I G + E+ ++++ L P TYT L++GY K+ D E S I
Sbjct: 558 PDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSI 617
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L+ M+ G P Y R S+ +E A + ++ ++G PD Y L+ LCK
Sbjct: 618 LQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCK 677
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
++ A+ + EM G + + LI CR A F+ ++ +GL+P+ +T
Sbjct: 678 MADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVT 737
Query: 357 FKRLNDEFKKRG 368
+ L D K G
Sbjct: 738 YTALIDGNCKNG 749
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 30/346 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + T+ LI Y + +E A + N + N D+ + LL+ K
Sbjct: 557 VPD---EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADT----YTDLLEGYFKSN 609
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ S L P +Y I++ RS+N++ A E+ K + P++
Sbjct: 610 DHEKVSSILQSM--LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 667
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y +L+ G C++ +++A+ L+ EM KEG+EP + YN +IDG +G + + L
Sbjct: 668 YSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 727
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P VTYT+L+ G CK GD+ A + K M+ RG P YN S +E
Sbjct: 728 AKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLE 787
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD-----LAIQVSKEMKCRGCDI-DLD 320
A+ L +M GY L + L++ CK +L L + + +E+ + ++
Sbjct: 788 QALFLTEEMFNRGYAHVSL-FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846
Query: 321 TSTMLIHLLCRMYKF--------------DEASAEFEDMIRRGLVP 352
T LC ++ D S F DMI +GL+P
Sbjct: 847 TEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMINKGLIP 892
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V ++L++ + ++ +V+ A + L M + P L++ R ++ +L M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
GI P+ Y+T ++ +A F+ + E + VTY ++ G C++G +
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A + M+ G P TY K G++++A L +M SG P+ + Y L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ KE K A + EM G + LI LC++ + AS +MI+ G
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416
Query: 351 VPHYLTFKRL 360
P T+ L
Sbjct: 417 RPDTFTYHPL 426
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 25/230 (10%)
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT------------------ 218
P+A + + L A F + +G++ + ++ P P +V +
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPS 172
Query: 219 -------SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
LV Y K G + A++++ MM G P+ N + + +E L
Sbjct: 173 HSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKL 232
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
M +G PD TY L+ CK D A +V +EM+ R C ++ T ++I LCR
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+EA E+M+ GL P T+ L + K G A+ L + MS
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 41/238 (17%)
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE---EVSGMMERF 205
LV+ Y + V A ++V M G+ P N ++ L+ A E ++ G ME
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P + TY++ ++ +CKA D + A K+ + M R
Sbjct: 240 GI---PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRR---------------------- 274
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ AMN +TY++++ LC+ ++ A +EM G D T L
Sbjct: 275 DCAMN-------------EVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGAL 321
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
++ LC+ + EA A ++M GL P+ + + L D F K G A A + N M S
Sbjct: 322 MNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA 379
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 42/376 (11%)
Query: 31 VSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
VS D TF I+I + + G + A + A N+ S A+ + L+D CK+G+V
Sbjct: 184 VSPDLFTFNIVISGFCKTGQLRKA---GDVAKNISAWGVAPSVAT-YNTLIDGYCKRGQV 239
Query: 89 KAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
KE+ Q+ +P V +N+L+NG+ + N+ A + + EMR++ + NVVTY
Sbjct: 240 GKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTY 299
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMR-----------------------------------K 172
+LV G CR +V+ +I+LV+EM +
Sbjct: 300 NSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQ 359
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G++PN I YNT++DG G+ +E + + P + TY L+ G+ + D
Sbjct: 360 RGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRS 419
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
S +L M +G TYN G+V A+ L +M+E G P + Y+ ++
Sbjct: 420 VSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIIN 479
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C++ A ++ M+ R ++ T + + C+M K DEA+ +M+ +GLVP
Sbjct: 480 GFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVP 539
Query: 353 HYLTFKRLNDEFKKRG 368
+ +T++ +N ++G
Sbjct: 540 NRITYEIINSGMIEKG 555
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 111/228 (48%), Gaps = 3/228 (1%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+ + L+ R RVD A R + + + P+ +N VI G + G+ + +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCK---AGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ P++ TY +L+ GYCK G + +LK MI G P T+N
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
+ K + A+ ++++M + G + +TY+ L+ LC+E K++ +I++ +EM+ G
Sbjct: 271 YCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
L T +++ C+ EA + + +RG+ P+ +T+ L D +++
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRR 378
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 3/201 (1%)
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+A N ++ LV A R + L P + T+ ++ G+CK G L A +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN---LYRKMIESGYTPDRLTYHILLKI 293
K + + G PS TYN + K G+V + L ++MI++G +PD +T+++L+
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
CKE + AI+V +EM+ +G ++ T L+ LCR K +++ E+M GL
Sbjct: 271 YCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330
Query: 354 YLTFKRLNDEFKKRGMTALAQ 374
T + + F K+GM A+
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAE 351
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+P V+ YN L+ G+ S++ + EM+++ V +VVTY L+ C V +A++
Sbjct: 398 SPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVK 457
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ EM + G+EP + YNT+I+G E G + + R + +VTY +K +C
Sbjct: 458 LLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFC 517
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G ++ A+ +L M+ +G +P+ TY + MIE GY PD
Sbjct: 518 KMGKMDEANVVLNEMLEKGLVPNRITYEI----------------INSGMIEKGYVPDIS 561
Query: 286 TY 287
Y
Sbjct: 562 GY 563
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L+ +LC +G V+ A + + E+ P YN ++NG+ + + A L
Sbjct: 439 YNVLIGALCCKGEVRKAVKLLDEMVEV--GLEPKHVAYNTIINGFCEKGDAQGAHEIRLR 496
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K NVVTY ++ +C++ ++D A ++ EM ++G+ PN I Y + G++E G
Sbjct: 497 MEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGY 556
Query: 195 FEEVSG 200
++SG
Sbjct: 557 VPDISG 562
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + ++ A+ + + K ++ P+VV++ TL+ GY
Sbjct: 125 EE--SLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+L +D RL M+ G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I G PD++TY L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 303 IMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 5/304 (1%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVY 112
+W F + +L+ + + F IL+ S K+G ++ A F + S P+V +
Sbjct: 120 VWGF-YEESLEC--GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW--SLRPSVVSF 174
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N L+NG+ + ++ + R M+ V P+V TY L+ G C+ ++D A L EM
Sbjct: 175 NTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLD 234
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+G+ PN + + T+IDG + GR + + ++ L P ++TY +L+ G CK GDL+
Sbjct: 235 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A ++ MI +G P TY K G +E A ++MI+ D + Y L+
Sbjct: 295 AQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G +P
Sbjct: 355 GLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Query: 353 HYLT 356
+T
Sbjct: 415 SVVT 418
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 5/241 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N++ + + EG RL A + + K + P+ + +NT+++G ++ G +E +
Sbjct: 140 NILMHSFVKEGEIRL-----AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
V P + TY+ L+ G CK ++ A+ + M+ +G +P+ T+ K
Sbjct: 195 NAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITY 314
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T LI C+ + A + MI+ + + + L + G + A+K+ M +
Sbjct: 315 TTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLN 374
Query: 383 V 383
V
Sbjct: 375 V 375
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%)
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
G+ S +N F K G++ A +++ + + P ++++ L+ K LD
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ M+ G D+ T ++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDG 250
Query: 364 FKKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLI 277
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 10/375 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L KA W + + VPD T+ +I+ + + G V
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVY---TYTNVIKAHCKVGDVIKGKMVLS--- 266
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+M K + + LC+ G V A E K+ +++ P Y +L++G+
Sbjct: 267 --EMEKECKPNLFTYNAFIGGLCQTGAVDEALEV--KKLMMEKGLGPDGHTYTLLVDGFC 322
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ K K+A+ + M + PN TY L++G+ + ++ A+R+ EM G++ N +
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I G+ +AG + + L+ P TY L+ GY K+ D+ A ++L M
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+R PSP TY+ ++ A + +MI +G P+ Y L+K +E +
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++AI++ K M G DL LI LCR K +EA DM +G+ P+ T+
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF 562
Query: 361 NDEFKKRGMTALAQK 375
+ + K G +A++
Sbjct: 563 INLYSKSGEIQVAER 577
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 175/383 (45%), Gaps = 41/383 (10%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I A+AG + A+ F N ++ + + +L+D K + A E
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLF----NEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACEL 438
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ K + P+ Y++L++G S +++ A +M + V PNV YGTL++ Y
Sbjct: 439 LAEMKA--RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM------------ 202
+ R + AI L+K M G+ P+ YN +I GL A + EE ++
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556
Query: 203 -------------------ERFL--VCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKM 239
ER+ + G P V YT L+KG+C G+ A K
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M+ +G +P Y+ SK GK ++AM ++ K +++G PD Y+ L+ CKE
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
++ A Q+ EM G + ++ LI+ LC++ + +A F+++ + LVP +T+
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
+ D + K G A KL + M S
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMIS 759
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 36/336 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC+ +V+ A E + P Y +N + +S ++ AER++ +
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGE--KGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN V Y L++G+C + A+ K M ++G+ P+ Y+ +I L + G+
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E G+ +FL P + Y SL+ G+CK GD+E AS++ M+ G P+ YN
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNT 701
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+V A L+ ++ E PD +TY ++ CK L A ++ EM +G
Sbjct: 702 LINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG 761
Query: 315 CDID----------------------------------LDTSTMLIHLLCRMYKFDEASA 340
D L LI C+ K EA
Sbjct: 762 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARE 821
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F+DM+ + L P+ +T+ L D + K M A++L
Sbjct: 822 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 857
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 161/353 (45%), Gaps = 12/353 (3%)
Query: 14 AWCLLLDKIGGHEVPDFVSKD------TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
A C + D I G V + K+ T+ I + G V+ A+ L M K
Sbjct: 251 AHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEV----KKLMMEKG 306
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
+ +L+D CKQ R K A F P Y L++G+ + N+++
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS--SGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A R EM + NVVTY ++ G + + +A+ L EM G+EP+ YN +ID
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
G +++ + ++ + P+ TY+ L+ G C + DL+ A+++L MI G P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ Y + + + + E A+ L + MI +G PD Y+ L+ LC+ K++ A +
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+M +G + T I+L + + A F+DM+ G+VP+ + + L
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 158/358 (44%), Gaps = 43/358 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ L+ CK+G ++ AS+ + + L P + VYN L+NG + V A +
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEM--LHNGINPNIVVYNTLINGLCKLGEVTKARELFD 720
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ ++++ P+VVTY T+++GYC+ + A +L EM +GI P+ +Y +IDG + G
Sbjct: 721 EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780
Query: 194 RFEEV------------------SGMMERFLVCEPG------------------PTMVTY 217
E+ + +++ F C+ G P +VTY
Sbjct: 781 NLEKALSLFHEAQQKSVGSLSAFNSLIDSF--CKHGKVIEARELFDDMVDKKLTPNIVTY 838
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
T L+ Y KA +E A ++ M +R +P+ TY +++ G ++L++ M
Sbjct: 839 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G D + Y ++ CKE K A+++ + G ++ D LI LC+ +
Sbjct: 899 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIST 958
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSMELLDS 392
+M + L T L F K G A K+ VM VP S+ L DS
Sbjct: 959 VLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDS 1016
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 38/346 (10%)
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
S ++F+I +D G + AS F + + + PT+ N L+ ++ +
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVF--IASISEGFFPTLICCNNLMRDLLKANMMGLFW 227
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ + M + + P+V TY +++ +C++ V + ++ EM KE +PN YN I GL
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGL 286
Query: 190 VEAGRFEEV----SGMMERFL-------------VCEP------------------GPTM 214
+ G +E MME+ L C+ P
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+L+ G+ K G++E A +I MI+RG + TYN +K G++ AM+L+ +
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+ +G PD TY++L+ K + A ++ EMK R T ++LI LC
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A+ + MIR G+ P+ + L + + +A +L +M
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 71/192 (36%), Gaps = 34/192 (17%)
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
G + + + + G L AS + IS GF P+ N R K +
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWK 228
Query: 271 LYRKMIESGYTPDRLTYHILLKI----------------------------------LCK 296
+Y M+E+ PD TY ++K LC+
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQ 288
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+D A++V K M +G D T T+L+ C+ + EA FE M GL P+ T
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348
Query: 357 FKRLNDEFKKRG 368
+ L D F K G
Sbjct: 349 YTALIDGFIKEG 360
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 44/222 (19%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
P+ V T+ ILI Y +A M+E A F LDM
Sbjct: 832 TPNIV---TYTILIDAYGKAEMMEEAEQLF-----LDMET-------------------- 863
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
++ P Y LL + + N + +M + + +
Sbjct: 864 ----------------RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 907
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
YG + YC+ + A++L+ + EGI+ V++ +I L + + V ++
Sbjct: 908 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
E + T +L+ G+ K+G+ + ASK+L +M G++P+
Sbjct: 968 KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPT 1009
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 153/323 (47%), Gaps = 6/323 (1%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVY 112
+W F +LD + F + I+L+SLC QG++ A K K P Y
Sbjct: 214 VWLF-LKESLD--RKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK---NCRLPNAVTY 267
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N +LN + + K A R +M K + ++ TY +++ C+L+R RA L+K MR+
Sbjct: 268 NTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMRE 327
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+ P+ YNT+I G G+ + + L P++ TYT+L+ GYC+ G +
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE 387
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A ++L M G PS TY+ + K K+ A++L + + + +R Y IL+
Sbjct: 388 ARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILID 447
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+ ++ A Q+ K M G D D+ T + LI+ +C+M E M + G++P
Sbjct: 448 GFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 507
Query: 353 HYLTFKRLNDEFKKRGMTALAQK 375
+ + + L F K G A K
Sbjct: 508 NNVLYTTLVFYFCKAGHAKEALK 530
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 171/358 (47%), Gaps = 21/358 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ + + G V A+ + + K + LL+ L +G+VKAAS
Sbjct: 686 TYTILLDGFCKRGKVVPALILLQMM----LEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 741
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + +A + YN ++NG+ + + + ER M + V P+ +Y L+ GY
Sbjct: 742 FQEIICKEGLYADCI-AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 800
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
+ ++ R + L ++M KEGI+P+ + Y +I GL E G E +E+ ++ P
Sbjct: 801 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 860
Query: 215 VTYTSLVKGYCK----------------AGDLEGASKILKMMISRGFLPSPTTYNYFFRY 258
+ + L+K + + GD++GA ++ + M + G +PS + R
Sbjct: 861 LAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRG 920
Query: 259 FSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDID 318
K GKVE+A+ ++ ++ +G P T+ L+ LCKE K+D A + + M+ G +D
Sbjct: 921 LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 980
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T +LI LC +A +E+M +GL+P+ T+ L G +KL
Sbjct: 981 VVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKL 1038
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 179/415 (43%), Gaps = 44/415 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K K A+ LL + PD S +T LI + G + AI+ F
Sbjct: 305 MIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNT---LIHGFFGEGKINLAIYIF---- 357
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + ++ + + L+D C+ GR A ++ + P+ Y+ LLNG+
Sbjct: 358 NQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ--ITGVRPSELTYSALLNGYC 415
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + A +R +++ N Y L++G+C+L V +A +++K M +GI+P+ I
Sbjct: 416 KHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVI 475
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I+G+ + G E ++ R P V YT+LV +CKAG + A K +
Sbjct: 476 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 535
Query: 241 ISRGFLPSPTTYN----------------YFFRYFSKF-------------------GKV 265
G + + +N F +Y S+ G V
Sbjct: 536 YRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNV 595
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+A ++Y M+ G+ PD TY LL+ LC+ L A + + + C ID T L
Sbjct: 596 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 655
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +C+ DEA E M+ R ++P T+ L D F KRG A L +M
Sbjct: 656 LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 710
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 166/377 (44%), Gaps = 42/377 (11%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFE 76
+L K+ +P+ V+ +T ++ Y + G ++A+ + DM KN ++ +
Sbjct: 252 MLQKMKNCRLPNAVTYNT---ILNWYVKKGRCKSALRILD-----DMEKNGIEADLYTYN 303
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELD---------------------------------Q 103
I++D LCK R A + +E++ Q
Sbjct: 304 IMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQ 363
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
S P+V Y L++G+ R+ +A R EM+ V P+ +TY L+ GYC+ ++ A
Sbjct: 364 SLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPA 423
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ L+K +R I N +Y +IDG + G + +++ L P ++TY++L+ G
Sbjct: 424 LDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALING 483
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
CK G + +IL M G LP+ Y YF K G ++A+ + + SG +
Sbjct: 484 MCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVAN 543
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+ ++ LL +E + A Q + M D+ + +I C+ EA + ++
Sbjct: 544 SVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYD 603
Query: 344 DMIRRGLVPHYLTFKRL 360
+M+R G P T+ L
Sbjct: 604 NMVRHGWPPDICTYGSL 620
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 64/381 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE 93
+F +I Y + G V A ++ +MV++ + + LL LC+ G + A E
Sbjct: 581 SFNCIIDSYCQRGNVLEAFSVYD-----NMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE 635
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ L+++ A + N LL G + + +A +M N+ P+ TY L++G
Sbjct: 636 FMVYL--LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 693
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG-- 211
+C+ +V A+ L++ M ++G+ P+ I Y +++GLV G+ + S M + ++C+ G
Sbjct: 694 FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQE-IICKEGLY 752
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
+ Y S++ GY K G + ++++ M PS +YN + K G++ + L
Sbjct: 753 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 812
Query: 272 YRKMIESGYTPDRLTY-----------------------------------HILLKILCK 296
YR M++ G PD +TY IL+K +
Sbjct: 813 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 872
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLD-----------------TSTMLIHLLCRMYKFDEAS 339
+ K+ A+Q+ MK G DID + ++ LC+ K +EA
Sbjct: 873 KSKMSNALQLFSYMKWVG-DIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAI 931
Query: 340 AEFEDMIRRGLVPHYLTFKRL 360
F ++R G+VP TF L
Sbjct: 932 IVFSSIMRAGMVPTIATFTTL 952
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 160/351 (45%), Gaps = 17/351 (4%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L+ + R GM+ A ++ + + + +FD + F ++DS C++G V A +
Sbjct: 550 LLCSFYREGMIAEAEQFKQYMSRMKI--SFDVAS--FNCIIDSYCQRGNVLEAFSVYDNM 605
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
+ W P + Y LL G + ++ A+ F + + ++ + T TL+ G C+
Sbjct: 606 --VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHG 663
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTM 214
+D A+ L ++M I P+ Y ++DG + G+ + M+E+ LV P
Sbjct: 664 TLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV----PDT 719
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISR-GFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ YT L+ G G ++ AS + + +I + G YN + K G++ + L R
Sbjct: 720 IAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMR 779
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M E+ P +Y+IL+ K+ +L + + ++M G D T +LI LC Y
Sbjct: 780 NMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE-Y 838
Query: 334 KFDEASAEF-EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
E + +F E M+ G+ P L F L F ++ + A +L + M V
Sbjct: 839 GLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWV 889
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 43/348 (12%)
Query: 62 LDMVKNFDSGA-----SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
LD++K S + +++ IL+D C+ G V A + + L P V Y+ L+
Sbjct: 424 LDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQIL--KCMLADGIDPDVITYSALI 481
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
NG + + + + M+K V PN V Y TLV +C+ A++ ++ + G+
Sbjct: 482 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV 541
Query: 177 PNAIVYNTVI-----DGLV-EAGRFEE-VSGMMERFLV----------CEPG-------- 211
N++++N ++ +G++ EA +F++ +S M F V C+ G
Sbjct: 542 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 601
Query: 212 ----------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
P + TY SL++G C+ G L A + + ++ + T N K
Sbjct: 602 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 661
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G +++A++L KM+ PD TY ILL CK K+ A+ + + M +G D
Sbjct: 662 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIA 721
Query: 322 STMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTFKRLNDEFKKRG 368
T L++ L + AS F+++I + GL + + + + + K G
Sbjct: 722 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 769
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 7/289 (2%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
++L+N + + V DA M + ++ + ++ + + + +KE
Sbjct: 164 DLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLD 223
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
+ N V++ L G+ + M+++ C P VTY +++ Y K G +
Sbjct: 224 RKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKS 282
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A +IL M G TYN K + A L ++M E TPD +Y+ L+
Sbjct: 283 ALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIH 342
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
E K++LAI + +M + + T T LI CR + DEA +M G+ P
Sbjct: 343 GFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP 402
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMS----SVPRSME--LLDSRCK 395
LT+ L + + K A L + S+ R+M L+D C+
Sbjct: 403 SELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQ 451
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 154/373 (41%), Gaps = 55/373 (14%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF--EILLDSLCKQGRV--KAASEY 94
++R A G +AI F++ L + D +LF ++L+++ K+G+V AA+ +
Sbjct: 130 VLRHLALTGFSCSAI----FSSLLRTISRCDP-TNLFSVDLLVNAYVKEGKVLDAAAAIF 184
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKE---NVTPNVVTYGTLV 151
F S + N L+ + +E WL +++ +V T ++
Sbjct: 185 FMDECGFKASLFSCNNILNALVG-------INKSEYVWLFLKESLDRKFPLDVTTCNIVL 237
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
C ++ +A ++++M+ + PNA+ YNT+++ V+ GR + +++
Sbjct: 238 NSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIE 296
Query: 212 PTMVTYTSLVKGYCK-----------------------------------AGDLEGASKI 236
+ TY ++ CK G + A I
Sbjct: 297 ADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYI 356
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
M+ + PS TY + + G+ ++A + +M +G P LTY LL CK
Sbjct: 357 FNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCK 416
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
KL A+ + K ++ R I+ T+LI C++ + +A + M+ G+ P +T
Sbjct: 417 HSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVIT 476
Query: 357 FKRLNDEFKKRGM 369
+ L + K GM
Sbjct: 477 YSALINGMCKMGM 489
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKDGDIRJAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ + D A L EM +G+ PN + + T+IDG +
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 163/345 (47%), Gaps = 6/345 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 --EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G++P+ Y+ +I+G + + ++ + + + LV P V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 249 XFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC +
Sbjct: 309 SXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ CK+ +
Sbjct: 175 PSVVSYNT---LMNGYIRLGDLDEG---FRLKSAM-LASGVQPDVYTYSVLINGXCKESK 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 228 XDDANELFDEM--LVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+IDG + G + +R +
Sbjct: 286 NTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQ 345
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C G A K+L+ M+S G P TY F K G V
Sbjct: 346 ENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 406 GSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNILLNGWFRSKNVKDAERF 131
+F L+ + + G ++ A E + E + W P T R +L + K K F
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTXE-HKFWVPFDTCRK---VLEHLMKLKYFKLVWGF 129
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G +E + L P + TY+ L+ G CK + A+++ M+ +G +P+
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVX 249
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D T T LI C+ D A + MI+ + + L G +
Sbjct: 310 XKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSV 369
Query: 372 LAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 370 DAEKMLREMLSV 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY----------------- 215
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ C+ K D+A+ F++M+ +GLVP+ + F L D
Sbjct: 216 ------------------SVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 257
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLI 283
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + A E H ++ + ++ Y L++G DAE+ E
Sbjct: 320 YTTLIDGCCKEGDLDXAFE--HXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLRE 377
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 162/328 (49%), Gaps = 5/328 (1%)
Query: 55 TFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNI 114
FE L++ + A + +L L K + A E F + + S TV+VYN
Sbjct: 205 AFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVFTR---AEPSVENTVKVYNA 261
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV--DRAIRLVKEMRK 172
++ + RS + + MR+ P++V++ TL+ + + + AI L+ E+R+
Sbjct: 262 MMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRR 321
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G+ P+ I YNT+I A EE + + + P + TY +++ Y + G
Sbjct: 322 SGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGK 381
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A ++ + SRGF P +YN F F++ G VE ++ +M++ G+ D +TY+ ++
Sbjct: 382 AEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIH 441
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
+ K+ + DLA+Q+ ++MK G + D+ T T+LI L + K +EA+ +M+ G+ P
Sbjct: 442 MYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKP 501
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVM 380
T+ L + K G A++ + M
Sbjct: 502 TLRTYSALICGYAKAGKPVEAEETFDCM 529
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 19/328 (5%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNF-DSGASLFEILLDSLCKQG 86
PD ++ +T LI +RA +E A+ F+ DMV + + + ++ + G
Sbjct: 326 PDIITYNT---LISACSRASNLEEAVNVFD-----DMVAHHCEPDLWTYNAMISVYGRCG 377
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
A + F+ + + + P YN L + R NV+ + EM K + +T
Sbjct: 378 LSGKAEQLFNDLE--SRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMT 435
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y T++ Y + + D A++L ++M+ G P+ I Y +ID L + + EE +GMM L
Sbjct: 436 YNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEML 495
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
PT+ TY++L+ GY KAG A + M+ G P Y+ +F + +
Sbjct: 496 NTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPK 555
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
AM Y++MI G P+ Y ++L+ L +K++ +V ++M+ C ++ +
Sbjct: 556 RAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDME-EVCGMN---PQAIS 611
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHY 354
++L + +DEA+ M+RR + Y
Sbjct: 612 YILVKGDCYDEAA----KMLRRAISDRY 635
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 137/310 (44%), Gaps = 1/310 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L++ ++ CK G + A + E D + + VY ++ + R K + AE
Sbjct: 746 LYQSMMLLYCKMGFPETA-HHLIDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAG 804
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
MR+ +T N + L+E Y +RA + M K+G P N ++ L+ G
Sbjct: 805 NMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDG 864
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R EE+ +++ + + ++ + +AG++ KI M + G+ PS Y
Sbjct: 865 RLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYR 924
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ + +V D + +M E+G+ PD ++ +LK+ D Q+ + +K
Sbjct: 925 VMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKED 984
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G + D DT +LI + CR ++ E ++M GL P T+K L F K+ + A
Sbjct: 985 GLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQA 1044
Query: 374 QKLCNVMSSV 383
++L + S
Sbjct: 1045 EELFEELQST 1054
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 22/317 (6%)
Query: 35 TFVILIRRYARAGMVEAAIWTF----EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
T+ +I Y + G + A+ + N D++ + +L+DSL K +++
Sbjct: 435 TYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVIT--------YTVLIDSLGKTNKIEE 486
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A+ + L+ PT+R Y+ L+ G+ ++ +AE + M + P+ + Y +
Sbjct: 487 AAGMMSEM--LNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVM 544
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL--VC 208
++ + R RA+ KEM +GI P +Y ++ L A + E++ G + R + VC
Sbjct: 545 LDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDI-GRVVRDMEEVC 603
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P ++Y LVKG C + A+K+L+ IS + +S G+ A
Sbjct: 604 GMNPQAISYI-LVKGDC----YDEAAKMLRRAISDRYEIDRENLLSILSSYSSSGRHSVA 658
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
++L + E ++ L+ +LCK +LD A++ + G LI
Sbjct: 659 LDLLELLKEHTPRSSQMITEALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQC 718
Query: 329 LCRMYKFDEASAEFEDM 345
F EAS F DM
Sbjct: 719 CLENELFTEASQVFSDM 735
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 119/278 (42%), Gaps = 2/278 (0%)
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++LD+ + G + + +H K + P++ +Y ++ R K V+D E EM
Sbjct: 890 LMLDAFARAGNIFEVKKIYHGMKA--AGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEME 947
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ P++ + ++++ Y + + ++ + ++++G+EP+ YN +I R +
Sbjct: 948 EAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPK 1007
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E +M+ P + TY SLV + K +E A ++ + + S G + Y+
Sbjct: 1008 EGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMM 1067
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
+ + G A L+ M + G P T H+L+ + A +V +K +
Sbjct: 1068 KIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDAN 1127
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
+ + +I R ++ + + + GL P +
Sbjct: 1128 LSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDH 1165
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 134/317 (42%), Gaps = 12/317 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
V++ + LI YA +G E A F N M LL +L GR++
Sbjct: 813 VNRKVWNALIEAYAASGCYERARAVF----NTMMKDGPSPTVDSINGLLQALIVDGRLE- 867
Query: 91 ASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
E + +EL D + + ++L+ + R+ N+ + ++ + M+ P++ Y
Sbjct: 868 --ELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRV 925
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+ + CR ++V ++ EM + G +P+ ++N+V+ V F + + + +R
Sbjct: 926 MAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDG 985
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P TY L+ YC+ + ++ M + G P TY F K VE A
Sbjct: 986 LEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAE 1045
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ ++ +G DR YHI++KI A ++ MK G + + T +HLL
Sbjct: 1046 ELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIAT----MHLL 1101
Query: 330 CRMYKFDEASAEFEDMI 346
Y E E ++
Sbjct: 1102 MVSYGSSGQPQEAEKVL 1118
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V ++ W R+ V + WL +R +PN T++ + + A+ +
Sbjct: 194 VKSVGQESWHRAFEVYE----WLNLRHW-YSPNARMLSTILAVLGKANQEPLAVEVFTRA 248
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME--RFLVCEPGPTMVTYTSLVKGYCKAG 228
+ +E VYN ++ +G+F +V + + R CEP +V++ +L+ KAG
Sbjct: 249 -EPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEP--DLVSFNTLINARLKAG 305
Query: 229 DLEG--ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
++ A ++L + G P TYN S+ +E+A+N++ M+ PD T
Sbjct: 306 EMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWT 365
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ + + A Q+ +++ RG D + ++ R ++ E+M+
Sbjct: 366 YNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMV 425
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
+ G +T+ + + K+G LA +L M S R+ +++
Sbjct: 426 KIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVI 469
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 130/326 (39%), Gaps = 45/326 (13%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK--NFDSGASLFEILLDSLCKQGRV 88
+SK + ++++ +ARAG + FE +K + L+ ++ LC+ +V
Sbjct: 883 ISKSSILLMLDAFARAGNI------FEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQV 936
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
+ + +E + P + ++N +L + + + + + ++++ + P+ TY
Sbjct: 937 RDVEAMLSEMEE--AGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYN 994
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI-----DGLVEAGR--FEEVSG- 200
L+ YCR R + L+ EMR G+EP Y +++ LVE FEE+
Sbjct: 995 ILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQST 1054
Query: 201 -----------MMERF--------------LVCEPG--PTMVTYTSLVKGYCKAGDLEGA 233
MM+ + ++ + G PT+ T L+ Y +G + A
Sbjct: 1055 GCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEA 1114
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K+L + S Y+ + + G + +++ E G PD + ++
Sbjct: 1115 EKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRA 1174
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDL 319
AI + ++ G D+ +
Sbjct: 1175 ASLSQHTSEAILLLNALRDTGFDLPI 1200
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y L+ + + + V+ AE + E++ + Y +++ Y +A RL
Sbjct: 1023 PKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRL 1082
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M+ EG+EP + ++ +G+ +E ++ + + + Y+S++ Y +
Sbjct: 1083 FSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVR 1142
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDRL 285
GD + LK + G P + F R S +A+ L + ++G+ P RL
Sbjct: 1143 NGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLNALRDTGFDLPIRL 1202
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 13/302 (4%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FAN L ++ ++D+ CK G+V AA E F + + P Y+ L+
Sbjct: 454 FANGLS------PNVVIYTSIIDAYCKVGKVGAALEVFKLTEH--EGCRPNAWTYSSLIY 505
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G + + + A +M+++ +TP V+TY TL++G C+ D A RL + M + G+ P
Sbjct: 506 GLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 565
Query: 178 NAIVYNTVIDGLVEAGRFEEV-SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
+ YN + D L ++GR EE S ++++ +V T VTYTSLV G+ KAG+ E A+ +
Sbjct: 566 DEQAYNVLTDALCKSGRAEEAYSFLVKKGVVL----TKVTYTSLVDGFSKAGNTEFAAAL 621
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
++ M++ G TY+ + K K+ +A+++ +M G + + Y I++ + K
Sbjct: 622 IEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIK 681
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E K D A + EM G T T+ I C++ + +EA +M R G+ P +T
Sbjct: 682 EGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVT 741
Query: 357 FK 358
+
Sbjct: 742 YN 743
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 156/344 (45%), Gaps = 42/344 (12%)
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAA----SEYFHKRKELDQSWAPTVRVYNILL 116
N + + F F +++ CK ++ A S + +LD ++ Y +L+
Sbjct: 381 NGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLD------LQAYGVLI 434
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + +K+A+ E+ ++PNVV Y ++++ YC++ +V A+ + K EG
Sbjct: 435 SVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCR 494
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
PNA Y+++I GL++ + + ++ + P ++TYT+L++G CK + + A ++
Sbjct: 495 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 554
Query: 237 LKMMISRGFLPSPTTYN---------------YFFRY-----------------FSKFGK 264
+MM G P YN Y F FSK G
Sbjct: 555 FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGN 614
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
E A L KM+ G D TY +LL+ LCK+ KL+ A+ + +M RG ++ T+
Sbjct: 615 TEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI 674
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+I + + K D A + F +MI G P +T+ + K G
Sbjct: 675 IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIG 718
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 158/372 (42%), Gaps = 44/372 (11%)
Query: 34 DTFVI--LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
DT+ L+ Y R G + A W + +N S + IL+ LC+ V+ A
Sbjct: 217 DTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYS----YTILIQGLCETRCVREA 272
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
L +P + Y +L+ G + + DA EM + V P+V TY ++
Sbjct: 273 LVLL--LMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+GYC+ R+ A+ + M G P+ YN++I GL G+ +E ++ +
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFS 389
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMIS----------------------------- 242
PT++T+T+++ GYCKA ++ A ++ +MIS
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449
Query: 243 ------RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
G P+ Y + K GKV A+ +++ G P+ TY L+ L +
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQ 509
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ KL A+ + +M+ G + T T LI C+ ++FD A FE M + GL P
Sbjct: 510 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 569
Query: 357 FKRLNDEFKKRG 368
+ L D K G
Sbjct: 570 YNVLTDALCKSG 581
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 3/299 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++ + CK+G + A YF +E N LL G+ R+ +++ A +
Sbjct: 186 YNTMIMAYCKEGSLAIAHRYFRLLRE--SGMEMDTYTCNALLLGYCRTGDLRKACWLLMM 243
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M N +Y L++G C R V A+ L+ M ++G PN Y +I GL + GR
Sbjct: 244 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGR 303
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ +++ P++ TY +++ GYCK+G L+ A I +M G P TYN
Sbjct: 304 IHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNS 363
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
GK ++A L I G++P +T+ ++ CK +K+D A++V M
Sbjct: 364 LIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSK 422
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
C +DL +LI +L + ++ EA ++ GL P+ + + + D + K G A
Sbjct: 423 CKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAA 481
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 13/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + + A LLL + P+ T+ +LIR + G + A +
Sbjct: 259 LIQGLCETRCVREALVLLLMMLQDGCSPNL---HTYTLLIRGLCKEGRIHDARVLLDEMP 315
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+V + + + ++D CK GR+K A K P YN L++G
Sbjct: 316 RRGVVPSVWT----YNAMIDGYCKSGRLKDALGI--KTLMEGNGCNPDDWTYNSLIHGLC 369
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K +AE +P V+T+ ++ GYC+ ++D A+R+ M + +
Sbjct: 370 GGKP-DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQ 428
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y +I L++ R +E + P +V YTS++ YCK G + A ++ K+
Sbjct: 429 AYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLT 488
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ TY+ + K+ AM L KM E G TP +TY L++ CK+ +
Sbjct: 489 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 548
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ + M+ G D +L LC+ + +EA + ++++G+V +T+ L
Sbjct: 549 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTSL 605
Query: 361 NDEFKKRGMTALAQKLCNVM 380
D F K G T A L M
Sbjct: 606 VDGFSKAGNTEFAAALIEKM 625
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 25/335 (7%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ + + A FE + + + + +L D+LCK GR + A +
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA----YNVLTDALCKSGRAEEAYSF 589
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K+ + T Y L++G+ ++ N + A +M E + TY L++
Sbjct: 590 LVKKGVV-----LTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQAL 644
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ ++++ A+ ++ +M G++ N + Y +I +++ G+ + M + P+
Sbjct: 645 CKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 704
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TYT + YCK G +E A ++ M G P TYN F G ++ A + ++
Sbjct: 705 ITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKR 764
Query: 275 MIESGYTPDRLTYHILLKILCKED----------------KLDLAIQVSKEMKCRGCDID 318
MI++ P+ TY +LLK K KLD Q+ + M G +
Sbjct: 765 MIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPT 824
Query: 319 LDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
T + +I C+ + +EA + M+ + + P+
Sbjct: 825 AVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPN 859
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 158/372 (42%), Gaps = 30/372 (8%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
++K T+ L+ +++AG E A E N + + + + +LL +LCKQ ++
Sbjct: 597 LTKVTYTSLVDGFSKAGNTEFAAALIEKMVN----EGCKADSHTYSVLLQALCKQKKLNE 652
Query: 91 ASEYFHKRKELDQSWAPTVR----VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
A LDQ V+ Y I+++ + A+ + EM P+ +T
Sbjct: 653 ALSI------LDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAIT 706
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y + YC++ R++ A L+ EM + G+ P+ + YN I+G G + ++R +
Sbjct: 707 YTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMI 766
Query: 207 VCEPGPTMVTYTSLVKGYCKAG----------------DLEGASKILKMMISRGFLPSPT 250
P TY L+K + K L+ ++L+ M+ G P+
Sbjct: 767 DASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAV 826
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ F K ++E+A L M+ +P+ Y +L+K C + A M
Sbjct: 827 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNM 886
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G L++ LI LC +D+A A F D++ + + +K LND K G
Sbjct: 887 IECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHV 946
Query: 371 ALAQKLCNVMSS 382
+ +L + M +
Sbjct: 947 DICSQLLSAMEN 958
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
R+ + A + + YN+ L R + + + ++ +E + P+ VTY T++ YC+
Sbjct: 137 RRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKE 196
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG--MMERFLVCEPGPTMV 215
+ A R + +R+ G+E + N ++ G G + MM + C
Sbjct: 197 GSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNE--Y 254
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+YT L++G C+ + A +L MM+ G P+ TY R K G++ DA L +M
Sbjct: 255 SYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEM 314
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G P TY+ ++ CK +L A+ + M+ GC+ D T LIH LC K
Sbjct: 315 PRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGG-KP 373
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
DEA I RG P +TF + + + K
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCK 404
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 159/372 (42%), Gaps = 41/372 (11%)
Query: 1 MIKVLAKAKEFDSAWCLL----LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF 56
+++ L K K+ + A +L L + G+ V + I+I + G + A F
Sbjct: 640 LLQALCKQKKLNEALSILDQMTLRGVKGNIV-------AYTIIISEMIKEGKHDHAKSMF 692
Query: 57 EFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNIL 115
N + A + + + S CK GR++ A H E++++ AP V YN+
Sbjct: 693 ----NEMISSGHKPSAITYTVFISSYCKIGRIEEAG---HLIGEMERNGVAPDVVTYNVF 745
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR----------------R 159
+NG + A M + PN TY L++ + ++ +
Sbjct: 746 INGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIK 805
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+D +L++ M K G+ P A+ Y+++I G +A R EE +++ L + P YT
Sbjct: 806 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTM 865
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+K C E A+ + MI GF P +Y+Y G + A L+ ++E
Sbjct: 866 LIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMD 925
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
Y + + + IL L K +D+ Q+ M+ R C ID +T +M+ + EAS
Sbjct: 926 YNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTN------NIHEAS 979
Query: 340 AEFEDMIRRGLV 351
+E + LV
Sbjct: 980 GMYESYMCAPLV 991
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 163 AIRLVKEMRKEGIEPNAI---VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A+ ++ +R+ G + A+ YN + L+ E + + + + P VTY +
Sbjct: 129 AVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNT 188
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++ YCK G L A + +++ G T N + + G + A L M G
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
+ +Y IL++ LC+ + A+ + M GC +L T T+LI LC+ + +A
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++M RRG+VP T+ + D + K G
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSG 337
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 168/384 (43%), Gaps = 78/384 (20%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC + R+ A+ F + ++L P V Y L+ G + N+ A + E
Sbjct: 142 YNTLIKGLCMEHRISEATRLFLRMQKL--GCTPDVVTYGTLIKGLCGTGNINIALKLHQE 199
Query: 135 MRKE------NVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + N PNV+TY +V+G C++ R D A +L +EM+ +G+ P+ I YN++I G
Sbjct: 200 MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHG 259
Query: 189 LVEAGRFEEVSGMMERFL-----------------VCEPG------------------PT 213
AG++EE +++ L +C+ G P
Sbjct: 260 FCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 319
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY SL++G+C GDL A ++ M S+G P +YN +SK KVE+AM LY
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379
Query: 274 KMIESGYTPDRLTYHILLK-----------------------------------ILCKED 298
+M+ G P+ +TY LLK LCK D
Sbjct: 380 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 439
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A+++ E+K ++++ LI LC+ K + A FE + G P+ +T+
Sbjct: 440 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 499
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS 382
+ F + G A L M +
Sbjct: 500 IMIHGFCREGQVDKANVLIQKMEA 523
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 168/369 (45%), Gaps = 38/369 (10%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTF-EFANNLDMVK-NFDSGASLFEILLDSLCK 84
PD V T+ LI+ G + A+ E N++ + N + I++D LCK
Sbjct: 171 TPDVV---TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCK 227
Query: 85 QGRVKAASEYFHKRKE---------------------------------LDQSWAPTVRV 111
GR A + F + K LDQ P +
Sbjct: 228 VGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVT 287
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+N+L++ + V +A++ M + + P++VTY +L+EG+C + ++ A L M
Sbjct: 288 FNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMP 347
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+G EP+ I YN +I+G + + EE + L+ P ++TY SL+KG AG ++
Sbjct: 348 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 407
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A K+ +M + G + TY F K + +AM L+ ++ S + + + L+
Sbjct: 408 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 467
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LCK KL+ A ++ +++ G + ++ T T++IH CR + D+A+ + M G
Sbjct: 468 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCT 527
Query: 352 PHYLTFKRL 360
P +T+ L
Sbjct: 528 PDIITYNTL 536
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 2/292 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L+D+LCK+G+V A + ++ P + YN L+ G+ ++ A ++
Sbjct: 288 FNVLIDTLCKEGKVIEAKKLLGVM--IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 345
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+V++Y L+ GY + +V+ A++L EM G PN I Y++++ G+ AG+
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 405
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + TY + G CK L A K+ + S F N
Sbjct: 406 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 465
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K GK+E A L+ K+ G+ P+ +TY I++ C+E ++D A + ++M+ G
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
C D+ T L+ K +E M ++ + P +T + D K
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 10/329 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V TF +LI + G V A +V + + SL E C G
Sbjct: 283 PDMV---TFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE----GFCMVGD 335
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +A E F + P V YN+L+NG+ ++ V++A + + EM PNV+TY
Sbjct: 336 LNSARELFVSMP--SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 393
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L++G +VD A +L M+ GI N+ Y +DGL + E +
Sbjct: 394 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 453
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+ L+ G CKAG LE A ++ + + + G P+ TY F + G+V+
Sbjct: 454 SNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDK 513
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L +KM +G TPD +TY+ L++ + +KL+ +Q+ M + D T ++++
Sbjct: 514 ANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573
Query: 328 LLCRMYKFDEASAEFEDM-IRRGLVPHYL 355
+L + K+ E I++G+ H L
Sbjct: 574 MLSKDEKYQECLHLLPRFPIQKGVDKHLL 602
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 142/308 (46%), Gaps = 10/308 (3%)
Query: 83 CKQGRVKA--ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
CK G V A A +FH + + P++ +N LL+G + K+ + +MR +
Sbjct: 43 CKTGNVTATHALHFFHLM--MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL 100
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
+ + T L+ C + R+ + + G PN + YNT+I GL R E +
Sbjct: 101 SSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR 160
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM---ISRGFL---PSPTTYNY 254
+ R P +VTY +L+KG C G++ A K+ + M ISR + P+ TYN
Sbjct: 161 LFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNI 220
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K G+ ++A L+ +M G P ++Y+ L+ C K + + ++ EM +G
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T +LI LC+ K EA MI G+VP +T+ L + F G A+
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 340
Query: 375 KLCNVMSS 382
+L M S
Sbjct: 341 ELFVSMPS 348
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 10/262 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD +S + +LI Y++ VE A+ + N + +V + + ++ LL + G+
Sbjct: 353 PDVIS---YNVLINGYSKTLKVEEAMKLY---NEMLLVGKRPNVIT-YDSLLKGIFLAGK 405
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V A + F K A Y I L+G ++ + +A + + E++ N +
Sbjct: 406 VDDAKKLFSVMKA--HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 463
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++G C+ +++ A L +++ EG EPN + Y +I G G+ ++ + ++++
Sbjct: 464 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 523
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P ++TY +L++G+ ++ LE ++L M + P T + SK K ++
Sbjct: 524 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 583
Query: 268 AMNLYRKM-IESGYTPDRLTYH 288
++L + I+ G L H
Sbjct: 584 CLHLLPRFPIQKGVDKHLLMTH 605
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 165/406 (40%), Gaps = 79/406 (19%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ IL+ +AG V A+ + + D+ + ++D LCK GR
Sbjct: 170 PDVV---TYGILVNGLCKAGRVGDALRVLDGMSRQDL--DIRPDVVTLNTVVDGLCKSGR 224
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
V+ A + +R P YN L++ + R N+ A +M E V N+VT
Sbjct: 225 VQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTL 284
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMR------------------------------------ 171
T+V G CR R A+ +E R
Sbjct: 285 NTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEK 344
Query: 172 -KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME--------------RFLVC-------- 208
EG P+AI+Y T+I GL +AGR E+ M L+
Sbjct: 345 MSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRL 404
Query: 209 -----------EPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
E G P + TY +L+ G CKAGD ++L MI G PS T+
Sbjct: 405 HEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTL 464
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ K GK+++A+ + R M ESG P+ + Y+ L+ LCK +DLAI++ EMK +
Sbjct: 465 VHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG-LVPHYLTFKRL 360
++ T L+ L R E + E D +R P Y+T L
Sbjct: 525 PANVTTFNALLKGL-RDKNMPEKAFELMDQMREERCFPDYVTVDVL 569
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 6/312 (1%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEI 77
L++K+ VP + T ++ RAG AA+ F + A +
Sbjct: 268 LVEKMENEGVPQNIV--TLNTIVGGLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYST 323
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ +L V A E FH++ + + +P +Y +++G ++ ++DA M++
Sbjct: 324 LVGALLHTNNVGMAMELFHEK--MSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ Y L+ G+CR +R+ A L++EM++ GI P+ YNT++ G +AG F
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
V ++ + + P+++T+ +LV GYCK G ++ A +IL+ M G P+ YN
Sbjct: 442 VDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID 501
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K G V+ A+ L+ +M E + T++ LLK L ++ + A ++ +M+ C
Sbjct: 502 FLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFP 561
Query: 318 DLDTSTMLIHLL 329
D T +L+ L
Sbjct: 562 DYVTVDVLMEWL 573
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 42/314 (13%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRK-ENVTPNVVTYGTLVEGYCRLRRVDRAIRLV 167
V +N +L R ++V R + M+ +V P+VVTYG LV G C+ RV A+R++
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 168 KEMRKE--GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKG 223
M ++ I P+ + NTV+DGL ++GR +E +E+ + G P VTY L+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNY----------------FFR---------- 257
+C+ G++ A ++++ M + G + T N FFR
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315
Query: 258 -----YFSKFG------KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
Y + G V AM L+ + + G++PD + Y ++ L + +L+ A +
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSM 375
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+ MK G +D +LI CR + EA ++M G+ P T+ L K
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK 435
Query: 367 RGMTALAQKLCNVM 380
G A +L M
Sbjct: 436 AGDFAAVDELLGKM 449
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 9/306 (2%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVR 110
+W F + NL+ + + F IL+ S K+G ++ A F + W P+V
Sbjct: 120 VWGF-YEENLEC--GYPASLYFFNILMHSFVKEGEIRLAQSVF----DAITKWGLRPSVV 172
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + ++ + R M+ V P+V TY L+ G C+ ++D A L EM
Sbjct: 173 SFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEM 232
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+G+ PN + + T+IDG + GR + + ++ L P ++TY +L+ G CK GDL
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++ MI +G P TY K G +E A ++MI+ D + Y L
Sbjct: 293 KQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 351 VPHYLT 356
P +T
Sbjct: 413 KPSVVT 418
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + ++ A+ + + K + P+VV++ TL+ GY
Sbjct: 125 EEN--LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+L ++ RL M+ G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I G PD+ TY L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N++ + + EG RL A + + K G+ P+ + +NT+++G ++ G E +
Sbjct: 140 NILMHSFVKEGEIRL-----AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P + TY+ L+ G CK ++ A+ + M+ +G +P+ T+ K
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTY 314
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T LI C+ + A + MI+ + + + L + G + A+K+ M S
Sbjct: 315 TTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 383 VPRSMEL 389
V E+
Sbjct: 375 VGLKPEI 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 137 KENVTPNVVTYGTLVEGYCR---LRRVDRAIRLVKEMRKEGIEPNAIVYNT---VIDGLV 190
K + ++ + L+ Y LR RL KE + + ++T V++ L+
Sbjct: 59 KGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFR------VPFDTCRKVLEHLM 112
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ F+ V G E L C ++ + L+ + K G++ A + + G PS
Sbjct: 113 KLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVV 172
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
++N + K G + + L M SG PD TY
Sbjct: 173 SFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY----------------------- 209
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D K G
Sbjct: 210 ------------SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 371 ALAQKLCNVMSSVPRSMELL 390
LA ++ M S S +L+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLI 277
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 10/320 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ IL+ + AG + F+ KN + ++++ C+ G V+ ASE
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKR----KNVAGDVYFYSAVINAYCRAGNVRRASEV 260
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + + P R Y L+NG+ + ++ AE +M+ V N + + T+++GY
Sbjct: 261 FDEC--VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--P 212
CR VD+A+ + M + GI+ + YNT+ GL R E+ ++ ++ E G
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH--IMTENGVES 376
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
V+YT+L+ + K GD+ A ++ + M +G PS TYN + K G + +A
Sbjct: 377 NYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFK 436
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M + G PD TY L+ C K+D+A+++ +EMK RG ++ T LI L +
Sbjct: 437 KEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKE 496
Query: 333 YKFDEASAEFEDMIRRGLVP 352
+ +EA +++M+ GL P
Sbjct: 497 GRSEEAFQFYDNMLAAGLTP 516
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 13/314 (4%)
Query: 63 DMVKNFDSGA-----SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+++K +SG + IL+D L G + F + K ++ A V Y+ ++N
Sbjct: 189 EVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKR--KNVAGDVYFYSAVIN 246
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ R+ NV+ A + E + PN TYG L+ G+C++ +++ A L+ +M+ G+
Sbjct: 247 AYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGH 306
Query: 178 NAIVYNTVIDGLVEAGRFE---EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
N I++NT+IDG G + E+ +MER + + TY +L G C+ +E A
Sbjct: 307 NQIIFNTMIDGYCRHGMVDKALEIKAVMERMGI---QLDVYTYNTLACGLCRVNRMEDAK 363
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
K+L +M G + +Y SK G + +A L+R M G P +TY++++
Sbjct: 364 KLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGY 423
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
K + A + KEM+ +G D+ T L+H C K D A FE+M +RG P+
Sbjct: 424 IKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNV 483
Query: 355 LTFKRLNDEFKKRG 368
+ + L K G
Sbjct: 484 VAYTALISGLAKEG 497
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 126/264 (47%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
+++++G+ ++ + DA R EM + V N Y L++ Y R + R ++KEM
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMES 196
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G+EP Y ++DGL AG +V + + + Y++++ YC+AG++
Sbjct: 197 GGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRR 256
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
AS++ + G P+ TY F K G++E A L M G +++ ++ ++
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C+ +D A+++ M+ G +D+ T L LCR+ + ++A M G+
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVES 376
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL 376
+Y+++ L K G A++L
Sbjct: 377 NYVSYTTLISIHSKEGDMVEARRL 400
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 16/272 (5%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDM-VKNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ LI + + G +EAA DM ++ +F ++D C+ G V A E
Sbjct: 275 TYGALINGFCKIGQIEAAEMLLT-----DMQLRGVGHNQIIFNTMIDGYCRHGMVDKALE 329
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + V YN L G R ++DA++ M + V N V+Y TL+
Sbjct: 330 IKAVMERMGIQL--DVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISI 387
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVS----GMMERFLVCE 209
+ + + A RL ++M +G P+ + YN +IDG +++G E M ++ LV
Sbjct: 388 HSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLV-- 445
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P + TY +LV G+C G ++ A ++ + M RG P+ Y +K G+ E+A
Sbjct: 446 --PDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAF 503
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
Y M+ +G TPD Y +L+ L + + D
Sbjct: 504 QFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKD 535
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLD----KIGGHEVPDFVSKDTFVILIRRYARAGMVEAA---- 52
+I K + ++A LL D +G +++ F +I Y R GMV+ A
Sbjct: 279 LINGFCKIGQIEAAEMLLTDMQLRGVGHNQI-------IFNTMIDGYCRHGMVDKALEIK 331
Query: 53 -----------IWTFE-FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKE 100
++T+ A L V + L I+ ++ + V + KE
Sbjct: 332 AVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKE 391
Query: 101 LDQSWA-------------PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
D A P+V YN++++G+ +S ++++AERF EM K+ + P+V TY
Sbjct: 392 GDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTY 451
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
LV G+C +VD A+RL +EM++ G +PN + Y +I GL + GR EE + L
Sbjct: 452 AALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLA 511
Query: 208 CEPGPTMVTYTSLV 221
P Y+ LV
Sbjct: 512 AGLTPDDTLYSMLV 525
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++D K G ++ A E F K E + P V Y L++G + V A R + E
Sbjct: 416 YNVMIDGYIKSGSIREA-ERFKKEME-KKGLVPDVYTYAALVHGHCVNGKVDVALRLFEE 473
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M++ PNVV Y L+ G + R + A + M G+ P+ +Y+ ++ L R
Sbjct: 474 MKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKR 533
Query: 195 FEEV 198
+E+
Sbjct: 534 KDEI 537
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 193 GRFEEVSGMMERFLVCEPG-PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + ++ + L PG T ++ + +V G+CKAG ++ A ++L M G +
Sbjct: 111 GHLLPAAELLRKALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACC 170
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN +++ + ++M G P TY IL+ L + V E+K
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+ D+ + +I+ CR AS F++ + G+ P+ T+ L + F K G
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIE 290
Query: 372 LAQKLCNVM 380
A+ L M
Sbjct: 291 AAEMLLTDM 299
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 18/339 (5%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF----EFANNLDMVKNFDSGAS 73
L D+I V+ F +L+ RYA A V+ AI F ++ LD+V
Sbjct: 168 LFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVG------- 220
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F+ILL SLC+ V+ A F ++K+ + P ++ +NI+LNGW ++ DA+R W
Sbjct: 221 -FQILLMSLCRYKHVEEAEALFLQKKD---EFPPVIKSWNIILNGWCVKGSLADAKRVWN 276
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ + P++ TYGT + + ++ A++L M ++GI P+ + N +ID L
Sbjct: 277 EIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKK 336
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R E + + TY +L+K +CK +E ++L M +G P+ TY+
Sbjct: 337 RIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYS 396
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
Y + K +D ++L ++M +SG D TY+++L + D V EM+
Sbjct: 397 YILKTTEK---PKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERN 453
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
G D + T+++H L K DEA + M RG+ P
Sbjct: 454 GSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTP 492
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 25/354 (7%)
Query: 32 SKDTFVILIRRY--ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ-GRV 88
SKD V I + +R G E A +FA+ +D +++L L KQ
Sbjct: 78 SKDVHVSEIVKILKSRDGDSELAEVLNQFADEMDE-----------DVVLKVLQKQRSNW 126
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT-- 146
K A +F L Q + R Y +L+ R K V+ + + E+ E+ +VVT
Sbjct: 127 KVALSFFKWAAGLPQ-YNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVES-RQSVVTNR 184
Query: 147 -YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+ L+ Y +V AI + + + G E + + + ++ L EE + F
Sbjct: 185 MFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEAL---F 241
Query: 206 LVC--EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L E P + ++ ++ G+C G L A ++ +I+ P TY F +K G
Sbjct: 242 LQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSG 301
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K+ A+ L+ M E G PD + ++ LC + ++ A+++ EM RGC D+ T
Sbjct: 302 KLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYN 361
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR-LNDEFKKRGMTALAQKL 376
LI C++ + ++ +DM +G+ P+ +T+ L K + + +L Q++
Sbjct: 362 TLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRM 415
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 168/347 (48%), Gaps = 8/347 (2%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + A+ + FD+ + E L+ ++K + +
Sbjct: 69 FSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLV-------KLKYFNLVW 121
Query: 96 HKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+E L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 122 AFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGY 181
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RL ++ +L M G++P+ Y+ +I+GL + + ++ + + E LV P
Sbjct: 182 IRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNG 241
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+T+L+ G+CK G ++ A ++ K M+S+ LP TYN K G + A +L +
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDE 301
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 302 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 362 SVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + W P+V YN L+NG+ R ++ + +
Sbjct: 138 FFNILMHRFCKEGDIRLAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKL 193
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L +EM +G+ PN + + T+IDG +
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCK 253
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK G L A ++ M +G P T
Sbjct: 254 NGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKIT 313
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 314 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREML 373
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
G D T TM+I+ C+ + S ++M R G P +T
Sbjct: 374 SFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 145/326 (44%), Gaps = 14/326 (4%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
FA ++ N S +F L+ + + G ++ A E + +E + W P +L
Sbjct: 52 FAAIIETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTRE-HKFWVP-FDTCKKMLE 109
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
+ K F+ E+ + ++ + L+ +C+ + A + + K G+ P
Sbjct: 110 HLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRP 169
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ + YNT+++G + G E + P + TY+ L+ G CK ++ A+++
Sbjct: 170 SVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 229
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+ M+ +G +P+ T+ K G+V+ AM +Y++M+ PD +TY+ L+ LCK+
Sbjct: 230 EEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKK 289
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
L+ A + EM +G D T T LI C+ D A + MI+ +
Sbjct: 290 GALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI------- 342
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSSV 383
RL+D TAL LC SV
Sbjct: 343 -RLDD----VAYTALISGLCQEGRSV 363
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 157/337 (46%), Gaps = 10/337 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKA 90
S T ILI Y A +F F+ ++K F F L++ C G V
Sbjct: 89 SIATLTILINCYC-----HQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSK 143
Query: 91 ASEYFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A + R +L P Y L+NG ++ +DA + +M ++ V PN++TY T
Sbjct: 144 AMAF---RLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYST 200
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+++G C+ R + A+RL + GI + + YN++I G G++ E + ++ +
Sbjct: 201 VIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGN 260
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P T+ LV CK G + A + +M+ RG P TYN F V +A
Sbjct: 261 INPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAR 320
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L+ +M++ G PD L Y++L+ CK D +D A+ + KE++C+ +L T LI L
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
C++ + ++M RG P +T+ D F K
Sbjct: 381 CKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCK 417
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 146/290 (50%), Gaps = 13/290 (4%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFH---KRKELDQSWAPTVRVYNILLNGWFRSK 123
N + F IL+D+LCK+GR+ A F KR E P + YN L+ G+ S
Sbjct: 260 NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE-----KPDIVTYNALMEGFCLSN 314
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
NV +A + M K + P+V+ Y L+ GYC++ VD A+ L KE+R + + PN YN
Sbjct: 315 NVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYN 374
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
++IDGL + GR V +++ +C+ G P +VTY + +CK+ E A + + ++
Sbjct: 375 SLIDGLCKLGRMSCVQELVDE--MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+G P Y+ F K K++ A + ++ G P+ TY I++ LCK+ D
Sbjct: 433 -QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
A+ + +M C D T +I L + D+A +MI RGLV
Sbjct: 492 EAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 135/270 (50%), Gaps = 1/270 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P +NIL++ + + +A+ + M K P++VTY L+EG+C V A L
Sbjct: 263 PDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAREL 322
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M K G+EP+ + YN +I+G + +E + + P + TY SL+ G CK
Sbjct: 323 FNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + +++ M RG P TYN F F K E A++L+R++++ G PD
Sbjct: 383 LGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYM 441
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++++ CK +KL +A + + + GC ++ T T++I+ LC+ FDEA M
Sbjct: 442 YDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMD 501
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
P +TF+ + ++R T A+KL
Sbjct: 502 DNDCPPDAVTFETIIGALQERNETDKAEKL 531
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 20/367 (5%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
L+ R G AI F ++ K + IL++ C Q + A
Sbjct: 61 LLGAIVRMGHYPTAISLFSQLHS----KGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
L + P + +N L+NG+ + V A F L++ + + +YG+L+ G C+
Sbjct: 117 --LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNG 174
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE----AGRFEEVSGMMERFLVCEPGPTM 214
+ A++L+++M ++ + PN I Y+TVIDGL + A S + R ++ + +
Sbjct: 175 QTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVD----V 230
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
V Y SL+ G C G A+++L MM+ P T+N K G++ +A ++
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M++ G PD +TY+ L++ C + + A ++ M RG + D+ +LI+ C++
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL----- 389
DEA F+++ + LVP+ T+ L D K G + Q+L + M +S ++
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410
Query: 390 -LDSRCK 395
LD+ CK
Sbjct: 411 FLDAFCK 417
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 165/342 (48%), Gaps = 9/342 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKNFDSGASLFEILLDSLCKQGRVKAASE 93
TF LI + GMV A+ A LD M K + + L++ LCK G+ + A +
Sbjct: 127 TFNTLINGFCINGMVSKAM-----AFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQ 181
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
K +E P + Y+ +++G + + + DA R + + + +VV Y +L+ G
Sbjct: 182 LLQKMEE--DLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHG 239
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C + + A RL+ M + I P+ +N ++D L + GR E G+ + P
Sbjct: 240 CCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPD 299
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY +L++G+C + ++ A ++ M+ RG P YN + K V++AM L++
Sbjct: 300 IVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFK 359
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
++ P+ TY+ L+ LCK ++ ++ EM RG D+ T + + C+
Sbjct: 360 EIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSK 419
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK 375
+++A + F ++ +G+ P + + + + F K +A++
Sbjct: 420 PYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEE 460
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 41/336 (12%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + P + V++ LL R + A + ++ + +TP++ T L+ YC +
Sbjct: 47 LRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHL 106
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM----------MERFL---- 206
A L+ + K G +PN + +NT+I+G G + ++ F
Sbjct: 107 SFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSL 166
Query: 207 ---VCEPG------------------PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+C+ G P ++TY++++ G CK + A ++ ++ SRG
Sbjct: 167 INGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGI 226
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
L YN G+ +A L M+ PD T++IL+ LCKE ++ A
Sbjct: 227 LVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQG 286
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
V M RG D+ T L+ C EA F M++RGL P L + L + +
Sbjct: 287 VFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYC 346
Query: 366 KRGMTALAQKL-----C-NVMSSVPRSMELLDSRCK 395
K M A L C N++ ++ L+D CK
Sbjct: 347 KIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 113/283 (39%), Gaps = 40/283 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF IL+ + G + A F M + + L++ C V A E
Sbjct: 267 TFNILVDALCKEGRIVEAQGVFAVM----MKRGEKPDIVTYNALMEGFCLSNNVSEAREL 322
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F++ + + P V YN+L+NG+ + V +A + E+R +N+ PN+ TY +L++G
Sbjct: 323 FNRM--VKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE--------VSGM----- 201
C+L R+ LV EM G P+ + YN +D ++ +E+ V G+
Sbjct: 381 CKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFY 440
Query: 202 ---------------------MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ L+ P + TYT ++ CK + A +L M
Sbjct: 441 MYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKM 500
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
P T+ + + + A L +MIE G D
Sbjct: 501 DDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 188 GLVEAGRFEEVSGMM---ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
G + +F V + R L P P + + L+ + G A + + S+G
Sbjct: 26 GHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKG 85
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS T + + A +L +++ G+ P+ +T++ L+ C + A+
Sbjct: 86 ITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAM 145
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ +G +D + LI+ LC+ + +A + M + P+ +T+ + D
Sbjct: 146 AFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGL 205
Query: 365 KKRGMTALAQKLCNVMSS 382
K + A A +L ++++S
Sbjct: 206 CKDRLIADALRLFSLVTS 223
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 9/306 (2%)
Query: 53 IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVR 110
+W F + NL+ + + F IL+ S K+G ++ A F + W P+V
Sbjct: 120 VWGF-YEENLEC--GYPASLYFFNILMHSFVKEGEIRLAQSVF----DAITKWGLRPSVV 172
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + ++ + R M+ V P+V TY L+ G C+ ++D A L EM
Sbjct: 173 SFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEM 232
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
+G+ PN + + T+IDG + GR + + ++ L P ++TY +L+ G CK GDL
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
+ A ++ MI +G P TY K G +E A ++MI+ D + Y L
Sbjct: 293 KQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ LC+E + A ++ +EM G ++ T TM+I+ C+ S ++M R G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGY 412
Query: 351 VPHYLT 356
P +T
Sbjct: 413 KPSVVT 418
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y +G + AI + FD+ + E L+ K K ++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFY 124
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + ++ A+ + + K + P+VV++ TL+ GY
Sbjct: 125 EEN--LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+L ++ RL M+ G++P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I G PD+ TY L+ CKE L+ A + K M +D T LI LC+ +
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQ 408
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
N++ + + EG RL A + + K G+ P+ + +NT+++G ++ G E +
Sbjct: 140 NILMHSFVKEGEIRL-----AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
P + TY+ L+ G CK ++ A+ + M+ +G +P+ T+ K
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G+V+ AM +Y++M+ +PD +TY+ L+ LCK+ L A + EM +G D T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTY 314
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T LI C+ + A + MI+ + + + L + G + A+K+ M S
Sbjct: 315 TTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Query: 383 VPRSMEL 389
V E+
Sbjct: 375 VGLKPEI 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ + K G++ A + + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS ++N + K G + + L M SG PD TY
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY----------------- 209
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 210 ------------------SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLI 277
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 183/389 (47%), Gaps = 22/389 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L A E D+A LL + G P+ V + L+R Y R+G + FE
Sbjct: 164 LIRGLCDASELDAALELLDEMCGSGVQPNVV---VYSCLLRGYCRSGRWQDVGKVFE--- 217
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM + +F L+D LCK+G+ A++ K + + P V YN+L+N
Sbjct: 218 --DMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKV--KDMMVQRGLEPNVVTYNVLINSL 273
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG--IEP 177
+ +V++A EM + V P+VVTY TL+ G + +D A+ ++EM + +EP
Sbjct: 274 CKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEP 333
Query: 178 NAIVYNTVIDGLVEAGRFEEV----SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
+ + +N+VI GL + GR + M ER +C +VTY L+ G+ + ++ A
Sbjct: 334 DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMC----NLVTYNYLIGGFLRVHKVKMA 389
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
++ + G P TY+ FSK +V+ A M + G + Y LL
Sbjct: 390 MNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAA 449
Query: 294 LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+C++ ++ A+ + EM + C +D + +IH C+ +DM+ GL P
Sbjct: 450 MCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPD 508
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+T+ L + + K G A+++ M++
Sbjct: 509 AVTYSMLINMYAKLGDLEEAERVLKQMTA 537
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 161/348 (46%), Gaps = 13/348 (3%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR---VKA 90
D +L RR A + EA + D V + +L +LC++G +A
Sbjct: 53 DAAALLNRRLRGAPVTEACSLLSALPDVRDAVS--------YNTVLAALCRRGGDHLRQA 104
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
S +E + P Y ++ G S+ +A M+ V +VVTYGTL
Sbjct: 105 RSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTL 164
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ G C +D A+ L+ EM G++PN +VY+ ++ G +GR+++V + E
Sbjct: 165 IRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGI 224
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P ++ +T L+ CK G A+K+ MM+ RG P+ TYN K G V +A+
Sbjct: 225 KPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALT 284
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM--LIHL 328
L ++M + G PD +TY+ L+ L ++D A+ +EM ++ D T +IH
Sbjct: 285 LRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHG 344
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC++ + +A E M RG + + +T+ L F + +A L
Sbjct: 345 LCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNL 392
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 104 SWAPTVR---VYNILLNGWFR--SKNVKDAERFWLEMRKEN---VTPNVVTYGTLVEGYC 155
S P VR YN +L R +++ A ++M +E PN V+Y T++ G C
Sbjct: 75 SALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLC 134
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RR A+ L++ M+ G+ + + Y T+I GL +A + +++ P +V
Sbjct: 135 ASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVV 194
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
Y+ L++GYC++G + K+ + M RG P + K GK A + M
Sbjct: 195 VYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMM 254
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
++ G P+ +TY++L+ LCKE + A+ + KEM +G D+ T LI L + +
Sbjct: 255 VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEM 314
Query: 336 DEASAEFEDMIRRGLV--PHYLTFK----------RLNDEFKKRGMTALAQKLCNVMS 381
DEA + E+MI+ V P +TF R+ K R M A +CN+++
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVT 372
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 2/260 (0%)
Query: 109 VRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
V Y L+ G + + A EM V PNVV Y L+ GYCR R ++ +
Sbjct: 158 VVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFE 217
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M + GI+P+ I++ +ID L + G+ + + + + + P +VTY L+ CK G
Sbjct: 218 DMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEG 277
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT--PDRLT 286
+ A + K M +G P TYN S ++++AM+ +MI+ PD +T
Sbjct: 278 SVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVT 337
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
++ ++ LCK ++ A++V + M RGC +L T LI R++K A +++
Sbjct: 338 FNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELA 397
Query: 347 RRGLVPHYLTFKRLNDEFKK 366
GL P T+ L + F K
Sbjct: 398 ISGLEPDSFTYSILINGFSK 417
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 169/339 (49%), Gaps = 18/339 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + T+ LI + G ++ AI F A M K L L+ L +QG
Sbjct: 352 VPD---ESTYCSLINGLCQDGDIDRAINVFNEA----MEKGLKPNLVLCNTLVKGLSQQG 404
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + ++ E +P + YN+++NG + V DA+ ++ + P+V T
Sbjct: 405 LILQALKLMNEMSE--NGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFT 462
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG----MM 202
+ TL++GYC+ ++D AI +V M G+ P+ I YN++++GL +AG++E+V G MM
Sbjct: 463 FNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMM 522
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E+ V P ++TY L + +CKA +E A +++ M ++G P + + F
Sbjct: 523 EKGCV----PNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN 578
Query: 263 GKVEDAMNLYRKMIES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G ++ A L++++ E ++ TY+I++ + +++A ++ +M G D T
Sbjct: 579 GDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYT 638
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++I C+ + + I +GL+P TF R+
Sbjct: 639 YRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRV 677
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 161/334 (48%), Gaps = 7/334 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T I I+ + + M+ AI + + + + L+ LCK +V A Y
Sbjct: 253 TVNIFIQGFCQRAMLNEAIRLLD-----GVGRGLTPDVITYNTLICGLCKNFKVVEAEHY 307
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
RK +++ + P YN +++G+ + +++A++ + + P+ TY +L+ G
Sbjct: 308 L--RKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGL 365
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +DRAI + E ++G++PN ++ NT++ GL + G + +M P +
Sbjct: 366 CQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDI 425
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY ++ G CK G + A ++ I++G LP T+N + K K+++A+ + +
Sbjct: 426 WTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDR 485
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G +PD +TY+ +L LCK K + + K M +GC ++ T +L C+ K
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+EA E+M +GL P + F L F G
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG 579
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 181/367 (49%), Gaps = 10/367 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +L + + FD A + + VPD TF I ++ + R AA N
Sbjct: 117 IMNILVEYRYFDQAHKVYMRMRDKGIVPDVY---TFTIRMKSFCRTSRPHAA---RRLLN 170
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N+ + +S A + ++ ++ A E F + L P + +N L++
Sbjct: 171 NMPS-QGCESSAVAYCTVIGGFYEENHRVEAHELFEEM--LGLGICPDIMAFNKLIHTLC 227
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R +V+++ER ++ K V+PN+ T ++G+C+ ++ AIRL+ + + G+ P+ I
Sbjct: 228 RKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVI 286
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YNT+I GL + + E + + + P TY S++ GYCK G ++ A +IL+
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+GF+P +TY + G ++ A+N++ + +E G P+ + + L+K L ++ +
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A+++ EM GC D+ T ++I+ LC++ +A D I +G +P TF L
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Query: 361 NDEFKKR 367
D + K+
Sbjct: 467 IDGYCKK 473
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 155/335 (46%), Gaps = 7/335 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I Y + GM++ A K F S + L++ LC+ G + A
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDG----AFKGFVPDESTYCSLINGLCQDGDIDRAINV 377
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F++ +++ P + + N L+ G + + A + EM + +P++ TY ++ G
Sbjct: 378 FNE--AMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGL 435
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C++ V A LV + +G P+ +NT+IDG + + + +++R P +
Sbjct: 436 CKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDV 495
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
+TY S++ G CKAG E K+M+ +G +P+ TYN F K KVE+A+NL +
Sbjct: 496 ITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMY 333
M G TPD + + L+K C LD A Q+ K + + + T ++I+
Sbjct: 556 MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKL 615
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ A F M G P T++ + D F K G
Sbjct: 616 NMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 159/341 (46%), Gaps = 14/341 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF--EILLDSLCKQ 85
PD ++ F LI R G V+ E L+ V +LF I + C++
Sbjct: 214 PDIMA---FNKLIHTLCRKGHVQ------ESERLLNKVLKRGVSPNLFTVNIFIQGFCQR 264
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
+ A + + P V YN L+ G ++ V +AE + +M E P+
Sbjct: 265 AMLNEAIRLLDG---VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGF 321
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY ++++GYC+L + A +++++ +G P+ Y ++I+GL + G + +
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ P +V +LVKG + G + A K++ M G P TYN K G V
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
DA NL I G+ PD T++ L+ CK+ KLD AI++ M G D+ T +
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSI 501
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++ LC+ K+++ F+ M+ +G VP+ +T+ L + F K
Sbjct: 502 LNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCK 542
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 36/332 (10%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
++G+++ A + F + + P+V+ YN ++N + A + ++ MR + + P+
Sbjct: 88 RKGKIQEAVDVFERMDFFN--CEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V T+ ++ +CR R A RL+ M +G E +A+ Y TVI G E E + E
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L P ++ + L+ C+ G ++ + ++L ++ RG P+ T N F + F +
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 264 ----------------------------------KVEDAMNLYRKMIESGYTPDRLTYHI 289
KV +A + RKM+ GY PD TY+
Sbjct: 266 MLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNS 325
Query: 290 LLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRG 349
++ CK + A Q+ ++ +G D T LI+ LC+ D A F + + +G
Sbjct: 326 IIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKG 385
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
L P+ + L ++G+ A KL N MS
Sbjct: 386 LKPNLVLCNTLVKGLSQQGLILQALKLMNEMS 417
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 46/249 (18%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW----APTVRVYNILLNGWFRSKNVKDAER 130
F L+D CK+ ++ A E +D+ W +P V YN +LNG ++ +D
Sbjct: 463 FNTLIDGYCKKLKLDNAIEI------VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMG 516
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ M ++ PN++TY L E +C+ R+V+ A+ L++EM+ +G+ P+ + + T++ G
Sbjct: 517 TFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFC 576
Query: 191 EAGRFEEVSGMMERF----------------------------------LVCEPG--PTM 214
+ G + + +R +CE G P
Sbjct: 577 DNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDS 636
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TY ++ G+CK G++ L + I +G +PS TT+ +V +A+ +
Sbjct: 637 YTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHL 696
Query: 275 MIESGYTPD 283
M+ G P+
Sbjct: 697 MVHKGIVPE 705
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ + T+ IL + +A VE A+ E N K F L+ C G
Sbjct: 527 VPNII---TYNILTESFCKARKVEEALNLIEEMQN----KGLTPDVVNFGTLMKGFCDNG 579
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + F KR + ++ T+ YNI++N + N+ AE+ + +M + +P+ T
Sbjct: 580 DLDGAYQLF-KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYT 638
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
Y +++G+C+ ++ + ++G+ P+ + V++ L R E G++
Sbjct: 639 YRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIH 695
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
KA++ + A L+ + PD V+ F L++ + G ++ A F+ +D
Sbjct: 540 FCKARKVEEALNLIEEMQNKGLTPDVVN---FGTLMKGFCDNGDLDGAYQLFK---RVDE 593
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
F + + I++++ + + A + F+K E ++P Y ++++G+ ++ N
Sbjct: 594 QYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCE--NGFSPDSYTYRVMIDGFCKTGN 651
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ F L ++ + P++ T+G ++ C RRV A+ ++ M +GI P V NT
Sbjct: 652 INSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE--VVNT 709
Query: 185 VIDG 188
+ +
Sbjct: 710 IFEA 713
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 9/342 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP VS +T + + R I E K + + + +DSLC+
Sbjct: 207 VPTIVSYNTLLSWCCKKGRFKFALVLIHHME-------CKGIQADVCTYNMFIDSLCRNS 259
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R +A Y +K ++ P YN L+NG+ + + A R + EM + N++PN++T
Sbjct: 260 R--SAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLIT 317
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ GYC + A+RL+ M + PN + T+++GL ++ +F+ ++ER+
Sbjct: 318 YNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYS 377
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ +++T ++ G C+ G L+ A ++L M G P T++ F K G +
Sbjct: 378 INRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLN 437
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A + K+ G+ P+ + + L+ CK + ++ M G + D T L+
Sbjct: 438 KAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLV 497
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LC K EA + R GLVP+ +TF + + + G
Sbjct: 498 ASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 159/357 (44%), Gaps = 33/357 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFE-----------FANNL---DMVKNFDS---------- 70
F +LIR Y R GMV A+ TF + N+ MVKN +
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQM 166
Query: 71 -------GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
S F IL+ LC QG++K A + + PT+ YN LL+ +
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMER--NGYVPTIVSYNTLLSWCCKKG 224
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYN 183
K A M + + +V TY ++ CR R + ++K+MR + I PN + YN
Sbjct: 225 RFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYN 284
Query: 184 TVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR 243
T+I+G V+ G+ + + + P ++TY L+ GYC G+ E A ++L +M +
Sbjct: 285 TLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEAN 344
Query: 244 GFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
P+ T K K + A N+ + + + + +++ +++ LC+ LD A
Sbjct: 345 DVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEA 404
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
Q+ EM G D+ T ++LI+ C++ ++A + R G VP+ + F L
Sbjct: 405 FQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTL 461
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 164/384 (42%), Gaps = 42/384 (10%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQ 85
VP+ V TF +I YA G A F+ M+ + LL LCK
Sbjct: 522 VPNSV---TFDCIINGYANVGDGSGAFSVFD-----KMISCGHHPSPFTYGSLLKVLCK- 572
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRV----YNILLNGWFRSKNVKDAERFWLEMRKENVT 141
++ RK L + + V YN L+ +S N+ +A R + EM + N+
Sbjct: 573 -----GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNIL 627
Query: 142 PNVVTYGTLVEGYCRLRRVDRA-IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P+ TY ++ G R R+ A I L + M+KE + N+IVY IDGL +AG+ +
Sbjct: 628 PDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALY 687
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ + ++ S+ GY + G + AS ++ ++ +P+ TT+N +S
Sbjct: 688 LFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYS 747
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
+ + LY M SG+ P+RLTYH L+ LC L+L I++ K ID
Sbjct: 748 RGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDL 807
Query: 321 TSTMLIHLLCRMYKFDEA-------------------SAEFEDMIRRGLVPHYLTFKRLN 361
T MLI C + D+ A + ++RR + +Y F
Sbjct: 808 TFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMH-- 865
Query: 362 DEFKKRGMTALAQKLCNVMSSVPR 385
E K+G +++ C +M + R
Sbjct: 866 -EMLKKGFIPTSKQYCTMMKRMCR 888
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 3/303 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F +L++ CK G + A E K + + P +++ L+ + NV + +F+
Sbjct: 423 FSVLINGFCKVGNLNKAKEVMSKIYR--EGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAA 480
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + T +LV C ++ A + + + G+ PN++ ++ +I+G G
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGD 540
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ ++ + C P+ TY SL+K CK + A K+LK + +YN
Sbjct: 541 GSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNT 600
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA-IQVSKEMKCR 313
SK G + +A+ L+ +MI++ PD TY +L L +E +L A I + + M+
Sbjct: 601 LIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKE 660
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
++ T I L + + A F++M +GL + + D + + G A
Sbjct: 661 ILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSA 720
Query: 374 QKL 376
L
Sbjct: 721 SSL 723
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 175/406 (43%), Gaps = 51/406 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++KVL K + F A LL K+ H +P V ++ LI +++G + A+ FE
Sbjct: 566 LLKVLCKGQNFWEAR-KLLKKL--HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE--- 619
Query: 61 NLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M++N + + +L L ++GR+ A + + + + ++ VY ++G
Sbjct: 620 --EMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSI-VYTCFIDGL 676
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
F++ K A + EM ++ ++ +++ ++ +GY R+ +V A L+ + R + + PN
Sbjct: 677 FKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNL 736
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERF-LVCEPG--PTMVTYTSLVKGYCKAGDLEGASKI 236
+N ++ G R +++ + + L+ G P +TY SL+ G C G LE K+
Sbjct: 737 TTFNILLHGY---SRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------------------- 271
LKM I+ T+N R + ++ ++L
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853
Query: 272 ----------YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
+M++ G+ P Y ++K +C+ + A ++ +M G +D
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
++ L K +EA + M+R +P TF L F K+
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKK 959
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 159/385 (41%), Gaps = 84/385 (21%)
Query: 45 RAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC----KQGRVKAASEYFHKRKE 100
+AG +AA++ F+ + G SL I L+S+ + G+V +AS K +
Sbjct: 678 KAGQSKAALYLFKEME--------EKGLSLDLIALNSITDGYSRMGKVFSASSLISKTR- 728
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
+++ P + +NILL+G+ R +++ + + MR+ PN +TY +L+ G C +
Sbjct: 729 -NKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGML 787
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM---MERFLVC--------- 208
+ I+++K E + + +N +I E ++V + ME F V
Sbjct: 788 ELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAV 847
Query: 209 ---------------------EPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ G PT Y +++K C+ GD++GA K+ M++ G
Sbjct: 848 TDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGI 907
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED------- 298
R + GK+E+AM + ++M+ P T+ L+ + CK+D
Sbjct: 908 SLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHN 967
Query: 299 ----------KLDL------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
KLD+ A+ +E+K +G ++ T +L+ +
Sbjct: 968 LKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIS 1027
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYL 355
+ +D+ RGLV YL
Sbjct: 1028 TKHYVSRGEIVLKDLNDRGLVSGYL 1052
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%)
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
+ N + L+ Y R V A+ M G +P+ N ++ +V+ R V
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
++ L P + ++ L+ C G L+ A IL MM G++P+ +YN +
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD 320
K G+ + A+ L M G D TY++ + LC+ + V K+M+ + +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 321 TSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ LI+ + K A+ F +MI L P+ +T+ L + + G A +L +VM
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341
Query: 381 SS 382
+
Sbjct: 342 EA 343
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 10/271 (3%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
V+++L+ + R V A + M P+V T ++ + R K+M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQM 166
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEE---VSGMMERFLVCEPG--PTMVTYTSLVKGYC 225
+ PN +N +I L G+ ++ + MMER G PT+V+Y +L+ C
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMER-----NGYVPTIVSYNTLLSWCC 221
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K G + A ++ M +G TYN F + + + +KM TP+ +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
+Y+ L+ KE K+ +A +V EM +L T +LI+ C F+EA + M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ P+ +T L + K +A+ +
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%)
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
N V++ +I + G L+ P++ T ++ K
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
K M++ P+ +++N GK++ A+N+ M +GY P ++Y+ LL C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ + A+ + M+C+G D+ T M I LCR + + + M + + P+ +
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELL 390
++ L + F K G +A ++ N M + S L+
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLI 316
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF--- 95
++R A G +E A+W + + + S F L+ CK+ K A
Sbjct: 917 MVRGLALCGKIEEAMWILQRMLRMKKIPT----TSTFTTLMHVFCKKDNFKEAHNLKILM 972
Query: 96 -HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
H R +LD + YN+L++ + +V A F+ E++++ + PN+ TY LV
Sbjct: 973 EHYRVKLD------IVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026
Query: 155 CRLRRVDRAIRLVKEMRKEGI 175
V R ++K++ G+
Sbjct: 1027 STKHYVSRGEIVLKDLNDRGL 1047
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKA 90
+ + +++R R G ++ A F+ + + + + D A + +LC G+++
Sbjct: 875 TSKQYCTMMKRMCRVGDIQGA---FKLKDQMVALGISLDDAAECAMVRGLALC--GKIEE 929
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + + + PT + L++ + + N K+A + M V ++V Y L
Sbjct: 930 AMWILQRMLRMKK--IPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVL 987
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ C V A+ +E++++G+ PN Y ++ +
Sbjct: 988 ISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 6/346 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F LI Y G + AI + FD+ + E L+ K K ++
Sbjct: 75 FSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLM----KLKYFKLVWGFY 130
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 131 --EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
RL +D RL M G+ P+ Y+ +I+GL + + ++ + + + L P V
Sbjct: 189 RLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSV 248
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T+L+ G+CK G ++ A +I K M+S+ LP TYN K G ++ A +L +M
Sbjct: 249 TFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM 308
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
G PD++TY L+ CKE LD A + K M +D T LI LC+ +
Sbjct: 309 SMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K+G KL M
Sbjct: 369 VDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK+G ++ A F + W P+V YN L+NG+ R ++ + R
Sbjct: 144 FFNILMHRFCKEGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A +L EM ++G+ PN++ + T+IDG +
Sbjct: 200 KSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCK 259
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + ++ L P +VTY +L+ G CK GDL+ A ++ M G P T
Sbjct: 260 NGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKIT 319
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A + MI+ D + Y L+ LC+E + A ++ +EM
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ + S ++M R G VP +T+ L
Sbjct: 380 SVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 10/221 (4%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ LCK+ ++ A++ F + L++ P + L++G ++ V A + +
Sbjct: 215 YSVLINGLCKESKMDDANKLFDEM--LEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQ 272
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG- 193
M +++ P++VTY L+ G C+ + +A L+ EM G++P+ I Y T+IDG + G
Sbjct: 273 MLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGD 332
Query: 194 ---RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
FE M++ + + V YT+L+ G C+ G A K+L+ M+S G P
Sbjct: 333 LDTAFEHRKMMIQENIRLDD----VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTR 388
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
TY F K G V L ++M G+ P +TY++L+
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F+ E+ + ++ + L+ +C+ + A + + K G+ P+ + YNT+++G +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
G +E + P + TY+ L+ G CK ++ A+K+ M+ +G +P+
Sbjct: 189 RLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSV 248
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
T+ K G V+ AM +Y++M+ PD +TY+ L+ LCK+ L A + EM
Sbjct: 249 TFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM 308
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G D T T LI C+ D A + MI+ + + + L + G +
Sbjct: 309 SMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 371 ALAQKLCNVMSSV 383
A+K+ M SV
Sbjct: 369 VDAEKMLREMLSV 381
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
++ + L+ Y L + AI + R+ V++ L++ F+ V G
Sbjct: 71 DIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
E L C ++ + L+ +CK GD+ A + + G PS +YN + +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G +++ L M SG PD TY +L+ LCKE K+D A ++ EM +G + T
Sbjct: 191 GDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTF 250
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
T LI C+ D A ++ M+ + L+P +T+ L K+G A L + MS
Sbjct: 251 TTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMS 309
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D CK+G + A E H++ + ++ Y L++G + DAE+ E
Sbjct: 320 YTTLIDGCCKEGDLDTAFE--HRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
M + P+ TY ++ +C+ V + +L+KEM+++G P+ + YN +++G
Sbjct: 378 MLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 4/280 (1%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR--LRRVDRAIR 165
TV+V+N ++ + RS DA + M + P++V++ TL+ + A+
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ E+R+ G+ P+ I YNT+I ++ E+ + E + E P + TY ++V +
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ G E A ++ + ++ +GF+P TYN F+K G V+ + +++++G+ + +
Sbjct: 340 RCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEI 399
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ ++ + K +LDLA+ + EM+ GC D T T++I L +M + EA EDM
Sbjct: 400 TYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDM 459
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL--CNVMSSV 383
GL P + F L + K G A A+ C + S V
Sbjct: 460 TDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGV 499
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 160/363 (44%), Gaps = 38/363 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAI---WTF 56
M+ V A++ FD A LLD + + PD VS F LI +++G + A + F
Sbjct: 227 MMGVYARSGRFDDAR-QLLDTMHDRGIDPDLVS---FNTLINARSKSGCLAAGVALDLLF 282
Query: 57 E---------------FANNLDMVKNFDSGASLFEILLDSLCK------------QGRVK 89
E + N + ++FE ++ S C+ GR
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342
Query: 90 AASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A E +EL ++ + P YN LL + + NV E ++ K N +TY
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T++ Y ++ R+D A+ L EMR G P+A+ Y +ID L + R E ++E
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
PT++ +++L+ Y K G A MI+ G P Y F++ G E
Sbjct: 463 GLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKM 522
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD-TSTMLIH 327
+ LYRKM+ Y PD Y +LL L KEDK + +V ++M+ C ++L STMLI
Sbjct: 523 LCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELL-CRMNLGIISTMLIK 581
Query: 328 LLC 330
C
Sbjct: 582 ARC 584
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 4/299 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD--AERF 131
+F ++ + GR A + D+ P + +N L+N +S + A
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMH--DRGIDPDLVSFNTLINARSKSGCLAAGVALDL 280
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
E+R+ + P+V+TY TL+ + ++ A+ + ++M P+ YN ++
Sbjct: 281 LFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGR 340
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ EE + + P +TY SL+ + K G+++ + ++ GF + T
Sbjct: 341 CGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEIT 400
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + K G+++ A+ LY +M G TPD +TY +++ L K +++ A +V ++M
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G L + LI + + +A F+ MI G+ P L + + D F + G T
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDT 519
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 159/369 (43%), Gaps = 48/369 (13%)
Query: 29 DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
D +S+ + ++L R+ + +I +E + M+K D +L+E L+ L +
Sbjct: 639 DLISECSIMLLCRK-------QTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEFF 691
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A + F + + + ++ Y +++ + + + A R + + + N+++
Sbjct: 692 SEACQVFCDMQFIGIEASKSI--YESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCR 749
Query: 149 TLV-EGYCRLRRVDRAIRLVKEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
++ E Y +++ +A LVK +R+ GI+ ++N +I E+G +E+ + + +
Sbjct: 750 VIIIEAYGKIKLWQQAEILVKGLRQASGIDRR--IWNALIHAYAESGLYEKARAVFDNMI 807
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P PT+ + +++ G L+ +++ + F S +T F+K G V
Sbjct: 808 KTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVF 867
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-----------------DLAI----- 304
+ M +Y M +GY P+ Y ++ +LC ++ DLAI
Sbjct: 868 EVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALL 927
Query: 305 -------------QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
QV + + G + D DT LI + CR ++ +E +M +RGL
Sbjct: 928 NMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLT 987
Query: 352 PHYLTFKRL 360
P ++K L
Sbjct: 988 PKLQSYKSL 996
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 134/331 (40%), Gaps = 8/331 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LI YA +G+ E A F+ + DS ++ +L GR+ E +
Sbjct: 786 LIHAYAESGLYEKARAVFDNMIKTGPLPTVDS----VNGMMRALIVDGRL---DELYVVV 838
Query: 99 KEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+EL D ++ + +LL+ + ++ +V + + + M+ PN+ Y +++ C
Sbjct: 839 EELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHH 898
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
R ++ EM G +P+ + N +++ AG F+ + + L P TY
Sbjct: 899 NRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTY 958
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ YC++ E +L M RG P +Y +K E A ++ +M
Sbjct: 959 NTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRS 1018
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
Y +R YH+++KI A + MK G + + T +L+ + E
Sbjct: 1019 KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPRE 1078
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
A ++ L L + + D + K G
Sbjct: 1079 AENVLNNLKSSSLEVSTLPYSTVFDAYLKNG 1109
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 117/280 (41%), Gaps = 8/280 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV N ++ + + E++ N + T L++ + + V +++
Sbjct: 813 PTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKI 872
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M+ G PN +Y ++I L RF +V M+ P + +L+ Y
Sbjct: 873 YNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTA 932
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG+ + +++ + ++ G P TYN + + + E+ L +M + G TP +
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y LL K + + A Q+ +EM+ + ++ + H++ ++Y+ ++ E+++
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRS----IYHMMMKIYRNAGNHSKAENLL 1048
Query: 347 ----RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G+ P T L + G A+ + N + S
Sbjct: 1049 AVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKS 1088
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P ++ Y LL +++ + A++ + EMR ++ N Y +++ Y +A L
Sbjct: 988 PKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENL 1047
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M+++GIEP + ++ AG+ E ++ + + Y+++ Y K
Sbjct: 1048 LAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLK 1107
Query: 227 AGDL-EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDR 284
GD G +K+L+M G P + F R S + DA+ L + + + G+ P R
Sbjct: 1108 NGDYNHGTTKLLEMK-RDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFDLPIR 1166
Query: 285 L 285
L
Sbjct: 1167 L 1167
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERF 131
F IL+ CK G ++ A F + W P+V YN L+NG+ R ++ +
Sbjct: 125 FFNILMHRFCKDGDIRVAQSVF----DAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXL 180
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M V P+V TY L+ G C+ ++D A L EM +G+ PN + + T+IDG +
Sbjct: 181 KSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
GR + + ++ L P ++TY +L+ G CK GDL+ A ++ M +G P T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 300
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
Y K G ++ A ++MI+ D + Y L+ C+E + A ++ +EM
Sbjct: 301 YTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREML 360
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G D T TM+I+ C+ S ++M R G VP +T+ L
Sbjct: 361 SVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVL 409
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 162/347 (46%), Gaps = 6/347 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
F LI Y +G + AI + FD+ + E L+ K K +
Sbjct: 55 VFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM----KLKYFKLVWGF 110
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + L+ + ++ +NIL++ + + +++ A+ + + K + P+VV+Y TL+ GY
Sbjct: 111 YEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 168
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
R +D L M G++P+ Y+ +I+GL + + ++ + + + LV P
Sbjct: 169 IRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 228
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VT+T+L+ G+CK G ++ A +I K M+S+ P TYN K G ++ A +L +
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 288
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M G PD++TY L+ CKE LD A + K M +D T LI C+ +
Sbjct: 289 MSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGR 348
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+A +M+ GL P T+ + +EF K G KL M
Sbjct: 349 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQ 395
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P VS +T L+ Y R G ++ F + + + + +L++ LCK+ +
Sbjct: 156 PSVVSYNT---LMNGYIRXGDLDEG---FXLKSXM-LASGVQPDVYTYSVLINGLCKESK 208
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A+E F + L + P + L++G ++ V A + +M ++++P+++TY
Sbjct: 209 MDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 266
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C+ + +A L+ EM +G++P+ I Y T+I+G + G + +R +
Sbjct: 267 NTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQ 326
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
V YT+L+ G C+ G A K+L+ M+S G P TY F K G V
Sbjct: 327 ENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWX 386
Query: 268 AMNLYRKMIESGYTPDRLTYHILL 291
L ++M G+ P +TY++L+
Sbjct: 387 GSKLLKEMQRDGHVPSVVTYNVLM 410
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 151/328 (46%), Gaps = 6/328 (1%)
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAP--TVRVYNIL 115
FA L+ S +F L+ + + G ++ A E + +E + W P T R +
Sbjct: 39 FAAILETKGTQRSDIYVFSGLIAAYLESGFLRDAIECYRLTRE-HKFWVPFDTCRK---V 94
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
L + K K F+ E+ + ++ + L+ +C+ + A + + K G+
Sbjct: 95 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 154
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P+ + YNT+++G + G +E + L P + TY+ L+ G CK ++ A++
Sbjct: 155 RPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANE 214
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ M+ +G +P+ T+ K G+V+ AM +Y++M+ +PD +TY+ L+ LC
Sbjct: 215 LFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 274
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K+ L A + EM +G D T T LI+ C+ D A + MI+ + +
Sbjct: 275 KKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEV 334
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSV 383
+ L + G + A+K+ M SV
Sbjct: 335 AYTALISGXCQEGRSVDAEKMLREMLSV 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
V++ L++ F+ V G E L C ++ + L+ +CK GD+ A + + G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS +YN + + G +++ L M+ SG PD TY
Sbjct: 154 LRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTY----------------- 196
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++LI+ LC+ K D+A+ F++M+ +GLVP+ +TF L D
Sbjct: 197 ------------------SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 238
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELL 390
K G LA ++ M S S +L+
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLI 264
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
VK + L++ CK+G + +A E H+++ + ++ Y L++G +
Sbjct: 291 VKGLKPDKITYTTLINGCCKEGDLDSAFE--HRKRMIQENIRLDEVAYTALISGXCQEGR 348
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
DAE+ EM + P+ TY ++ +C+ V +L+KEM+++G P+ + YN
Sbjct: 349 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNV 408
Query: 185 VIDG 188
+++G
Sbjct: 409 LMNG 412
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 186/427 (43%), Gaps = 71/427 (16%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLF------------------- 75
F +L++ +A GM + A++ F+ + + V S + L
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217
Query: 76 ------------EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
I++++ C+ GRV A E K + + P V YN L+NG+
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKM--VKEGLEPNVVTYNGLVNGYVGRG 275
Query: 124 NVKDAERFWLEMRKENVTPNVVT------------------------------------Y 147
+ + ER M + V+ NVVT Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
G LV+GYC++ R++ A+R+ EM + G++ N ++ NT+I G + G+ E + +
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +Y +L+ GYC+ G + A + + M+ G P+ TYN + G +D
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A++L+ M+E G TP+ ++ +L K D A+ + KE+ RG +I
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM--SSVPR 385
LC+M K EA A F+ M GL P +T++ L+D + K G A ++ VM ++
Sbjct: 516 GLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSA 575
Query: 386 SMELLDS 392
S+E+ +S
Sbjct: 576 SIEMYNS 582
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 39/312 (12%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ L D CK G V+ A F + ++ Q+ + ++ +YN L++G F+ + + D +
Sbjct: 545 YRTLSDGYCKNGNVQEA---FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLV 601
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM+ ++PNVVTYGTL+ G+C +++D+A L EM + G PN +V + ++ L
Sbjct: 602 EMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDD 661
Query: 194 RFEEVSGMMERFL-----------------------------------VCEPGPTMVTYT 218
R E + ++++ L +C + Y
Sbjct: 662 RISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYN 721
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+ G CK+G L+ A +L +++SRGFLP TY S G V++A L +M+E
Sbjct: 722 IAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEK 781
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ Y+ L+ LCK +D A ++ ++ +G + T +LI CR+ D+A
Sbjct: 782 GLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKA 841
Query: 339 SAEFEDMIRRGL 350
S E M G+
Sbjct: 842 SRLREKMTEEGI 853
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 166/367 (45%), Gaps = 20/367 (5%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
LI+ Y + G V A F + MV N + LLD C++G+V A +
Sbjct: 373 LIKGYCKLGQVCEAERVF-----VGMVDWNLKPDCYSYNTLLDGYCREGKVSKA--FMLC 425
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ L PTV YN ++ G + DA W M + VTPN ++ T+++ + ++
Sbjct: 426 EEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKM 485
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
DRA+ L KE+ G + + +NT+I GL + G+ E + +R P +TY
Sbjct: 486 GDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITY 545
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L GYCK G+++ A +I +M + S YN K K+ D +L +M
Sbjct: 546 RTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQT 605
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
G +P+ +TY L+ C E KLD A + EM RG ++ + ++ L R + E
Sbjct: 606 RGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISE 665
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQK---------LCNVMSSVPRSME 388
A+ + M+ ++ + +D+ K +T AQK +CN +S+
Sbjct: 666 ATVILDKMLDFDILA---VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNI 722
Query: 389 LLDSRCK 395
+D CK
Sbjct: 723 AIDGLCK 729
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 35/311 (11%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L + + + +N +++G + + +A + M++ ++P+ +TY TL +GYC+ V
Sbjct: 499 LGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNV 558
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
A ++ M ++ + + +YN++IDGL + + +V+ ++ P +VTY +L
Sbjct: 559 QEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTL 618
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE--- 277
+ G+C L+ A + MI RGF P+ + + ++ +A + KM++
Sbjct: 619 ISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI 678
Query: 278 --------------------------------SGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ + Y+I + LCK KLD A
Sbjct: 679 LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARS 738
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
V + RG D T LIH DEA ++M+ +GL+P+ + L +
Sbjct: 739 VLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLC 798
Query: 366 KRGMTALAQKL 376
K G AQ+L
Sbjct: 799 KLGNIDRAQRL 809
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 35/159 (22%)
Query: 57 EFANNLDM--VKNFDSGASLFEILLDSLCKQGRVKAA----------------------- 91
+ A++LD + N S ++ I +D LCK G++ A
Sbjct: 700 KIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLI 759
Query: 92 ---------SEYFHKRKE-LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
E F R E L++ P + +YN L+NG + N+ A+R + ++ ++ +
Sbjct: 760 HACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLV 819
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
PN VTY L+ YCR+ +D+A RL ++M +EGI I
Sbjct: 820 PNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 170/339 (50%), Gaps = 18/339 (5%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD + T+ LI + G ++ A+ FE A + K L+ L+ L +QG
Sbjct: 325 VPD---EFTYCSLIIGVCQDGDIDHALALFEEA----LGKGLKPSIVLYNTLIKGLSQQG 377
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A + + + + +P + YN+++NG + V DA + P++ T
Sbjct: 378 LVLKALQLMNDMSK--EGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFT 435
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF- 205
+ TL++GYC+ ++D AI ++ M G+ P+ I YN++++GL +A + E+V ME F
Sbjct: 436 FNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV---METFK 492
Query: 206 LVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
++ E G P ++TY L++ CKA + A +L+ + +RG +P P ++ F G
Sbjct: 493 MIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNG 552
Query: 264 KVEDAMNLYRKMIESGY--TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
+++A L+R+M E Y TY+I++ ++ +D+A ++ EM +GCD D T
Sbjct: 553 DLDEAYQLFRRM-EQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYT 611
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++I C++ + I G VP TF R+
Sbjct: 612 YRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRV 650
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 170/351 (48%), Gaps = 6/351 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNL--DMV-KNFDSGASLFEILLDSLCKQGRVKAA 91
TF I I+ R G++E A A N MV K + + ++ K G+++ A
Sbjct: 253 TFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDA 312
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
S K + + P Y L+ G + ++ A + E + + P++V Y TL+
Sbjct: 313 SRILKDAKF--KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLI 370
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G + V +A++L+ +M KEG+ P+ YN VI+GL + G + + ++ +
Sbjct: 371 KGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYL 430
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P + T+ +L+ GYCK ++ A IL M S G P TYN K K ED M
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMET 490
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++ ++E G P+ +TY+IL++ LCK K+ A+ + +E++ RG D + +I C
Sbjct: 491 FKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCN 550
Query: 332 MYKFDEASAEFEDMIRRGLVPHYL-TFKRLNDEFKKRGMTALAQKLCNVMS 381
DEA F M ++ + H + T+ + + F ++ +AQKL + M
Sbjct: 551 NGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMG 601
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 146/305 (47%), Gaps = 9/305 (2%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
++G+V+ A + F + + P++ YN ++N A + +L M+ E + P+
Sbjct: 88 RKGKVQEAVDVFERMDFYN--CEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V T+ ++ +CR +R A+RL+ M +G E NA+VY TVI G E E +
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L P + T+ L+ CK G L+ K+L ++ G P+ T+N F + + G
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKG 265
Query: 264 -------KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
KV +A N KM+ G PD TY+ ++ K K+ A ++ K+ K +G
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFV 325
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D T LI +C+ D A A FE+ + +GL P + + L ++G+ A +L
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQL 385
Query: 377 CNVMS 381
N MS
Sbjct: 386 MNDMS 390
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 136/348 (39%), Gaps = 80/348 (22%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAA---------------IW 54
+ D A L + +G P V +T LI+ ++ G+V A IW
Sbjct: 343 DIDHALALFEEALGKGLKPSIVLYNT---LIKGLSQQGLVLKALQLMNDMSKEGMSPDIW 399
Query: 55 TFEF-------------ANNL---DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
T+ ANNL + K + F L+D CK+ ++ A
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGI---- 455
Query: 99 KELDQSWA----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
LD W+ P V YN +LNG ++ +D + + ++ PN++TY L+E
Sbjct: 456 --LDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESL 513
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER----FLVCEP 210
C+ R+V A+ L++E+R G+ P+ + + TVI G G +E + R + +C
Sbjct: 514 CKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHT 573
Query: 211 --------------------------------GPTMVTYTSLVKGYCKAGDLEGASKILK 238
P TY ++ G+CK G++ L
Sbjct: 574 VATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLL 633
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
I GF+PS TT+ +V +A+ + M+ +G P+ +
Sbjct: 634 KEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 2/219 (0%)
Query: 162 RAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSG-MMERFLVCEPGPTMVTYTS 219
+A+ + ++KE G + + Y +I+ L G F+ + +ME L + Y S
Sbjct: 22 KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVS 81
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
++ Y + G ++ A + + M PS +YN ++G A +Y +M G
Sbjct: 82 AMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEG 141
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
PD T+ I +K C+ + A+++ M +GC+++ +I EA
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
F M+R G+ PH TF +L K+G +KL N
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLN 240
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L KA++ A LL + +PD VS F +I + G ++ A F
Sbjct: 509 LIESLCKARKVTEALDLLEEIRNRGLIPDPVS---FGTVISGFCNNGDLDEAYQLFR--- 562
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + + I++++ ++ + A + FH+ D+ P Y ++++G+
Sbjct: 563 RMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMG--DKGCDPDSYTYRVMIDGFC 620
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ NV F L+ + P++ T+G ++ C RV A+ +V M + G+ P A+
Sbjct: 621 KVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAV 680
Query: 181 VYNTVIDG 188
V T+ D
Sbjct: 681 V--TIFDA 686
>gi|357441367|ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480009|gb|AES61212.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 573
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 9/335 (2%)
Query: 26 EVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
++P F S LIR R G V+ N+ ++ F ++ SLCK+
Sbjct: 141 QIPHFPSCTN---LIRGLIRIGQVDKGCKIM----NMMVMSGGVPDTITFNAVIGSLCKR 193
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
G +K+A E+ P + YN ++ F + A FW + ++ P ++
Sbjct: 194 GHLKSALEFLEGMSL--SGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLI 251
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
TY LVE C+ RA+ ++++M +EG P+ +YN++++ + G +++ + ++
Sbjct: 252 TYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNL 311
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
L P +VTY L+ G + ILK+M P+ TYN K G +
Sbjct: 312 LSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFL 371
Query: 266 EDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTML 325
+ +++LY KM+ +PD +TY+ LL LCKE +D +IQ+ + C L T ++
Sbjct: 372 DRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIV 431
Query: 326 IHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
I+ L RM A + +M+ +G+ P Y+T + L
Sbjct: 432 INGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTL 466
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ SL G + E S +PT+ YNILLN +S + + +++
Sbjct: 323 YNILIHSLSLHGYSDVVDDILKIMNE--TSISPTLVTYNILLNSLCKSGFLDRSISLYIK 380
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M EN +P++VTY TL+ C+ +D +I+L+ + P + YN VI+GL
Sbjct: 381 MVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRS 440
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ M + P +T+ +LV G C+ E A +I K+M G Y
Sbjct: 441 IKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKC 500
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
+ K++ A+ M+++ PD Y+ LLK + E ++ A
Sbjct: 501 VILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTLLKSVANEGMVNEA 549
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 119/257 (46%), Gaps = 6/257 (2%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+T +++ C ++ A RLV+ M + P+ +I GL+ G+ ++ +M
Sbjct: 111 LTSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNM 170
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
++ P +T+ +++ CK G L+ A + L+ M G LP TYN R G
Sbjct: 171 MVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGD 230
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
A++ ++ + G+ P +TY +L++++CK A++V ++M GC D++
Sbjct: 231 PNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNS 290
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
L++ + + + + +++ G+ P+ +T+ L G + + + +M+
Sbjct: 291 LVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETS 350
Query: 385 RSME------LLDSRCK 395
S LL+S CK
Sbjct: 351 ISPTLVTYNILLNSLCK 367
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 128/313 (40%), Gaps = 2/313 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
+L SLC +G++ AA+ + Q P L+ G R V + M
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQ--IPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVM 173
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P+ +T+ ++ C+ + A+ ++ M G P+A YNT+I + + G
Sbjct: 174 SGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNL 233
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ L P ++TY LV+ CK A ++L+ M G P YN
Sbjct: 234 AVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVN 293
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ SK G +D + ++ G P+ +TY+IL+ L D+ + K M
Sbjct: 294 FSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISP 353
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
L T +L++ LC+ D + + + M+ P +T+ L + K G + +L
Sbjct: 354 TLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLL 413
Query: 378 NVMSSVPRSMELL 390
+ +S S L+
Sbjct: 414 HSLSGTNCSPGLV 426
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 2/233 (0%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+++ L++ KQG K + L P V YNIL++ +
Sbjct: 286 NMYNSLVNFSSKQGNYKDTALVISNL--LSHGMQPNVVTYNILIHSLSLHGYSDVVDDIL 343
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
M + +++P +VTY L+ C+ +DR+I L +M E P+ + YNT+++ L +
Sbjct: 344 KIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKE 403
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G +E ++ P +VTY ++ G + ++ A ++ M+ +G P T+
Sbjct: 404 GFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITH 463
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ + E+A+ +++ M G Y ++ LC++ KLD AIQ
Sbjct: 464 RTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQ 516
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASE 93
T+ IL+ ++G ++ +I + + MV +N + LL++LCK+G + + +
Sbjct: 357 TYNILLNSLCKSGFLDRSISLY-----IKMVSENCSPDIVTYNTLLNALCKEGFIDESIQ 411
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
H + S P + YNI++NG R +++K A+ + EM ++ + P+ +T+ TLV G
Sbjct: 412 LLHSLSGTNCS--PGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWG 469
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C++ + + A+ + K M + G + Y VI GL E + + ++ + + P
Sbjct: 470 LCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPD 529
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMI 241
Y +L+K G + A+ + + +I
Sbjct: 530 GKIYYTLLKSVANEGMVNEANDLHQRLI 557
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 162/315 (51%), Gaps = 49/315 (15%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I++L +A + + A C+LLD D +D +V++I Y + +V+ ++ F+
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWD---EDMWVMMIDSYGKEXIVQESVKMFQKME 107
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK---------RKELD--------- 102
L + + S +LF+++L ++GR A YF+K R +
Sbjct: 108 ELGVERTIKSYNALFKVIL----RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 103 ---------------QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ +P V YN ++NG++R K +++AE++++EM+ N+ P VVTY
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMME 203
TL++GY + +VD A+RLV+EM+ GI+PNAI Y+T++ GL A E + MM+
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMD 283
Query: 204 RFLVCEPGPT-MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
++L PT + L+ +CK+G+L+ A+ +LK MI Y F K
Sbjct: 284 KYL----APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKX 339
Query: 263 GKVEDAMNLYRKMIE 277
G+ + A+ L K+IE
Sbjct: 340 GQYDKAVKLLDKLIE 354
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
++++ + + V+++ + + +M + V + +Y L + R R A R +M E
Sbjct: 85 MMIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE 144
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
GIEP +N +I G +G+ E + E E P +VTY +++ GY + +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI 293
K M R P+ TY + + +V+DA+ L +M G P+ +TY LL
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 294 LCKEDKLDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC + + A + KEM + D LI C+ D A+ + MIR +
Sbjct: 265 LCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCN 378
+ L + F K G A KL +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLD 350
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + A L+M K+ + + + +++ Y + V ++++ ++M + G+E
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIK 116
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN + ++ GR+ + L PT T+ ++ G+ +G +E A++ + M
Sbjct: 117 SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDM 176
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
SR P TYN + + K+E+A + +M P +TY L+K D++
Sbjct: 177 KSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 236
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
D A+++ +EMK G + T + L+ LC EA ++M+ + L P
Sbjct: 237 DDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAP 288
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 111 VYNILLNGWFRSKNVKDAERF--WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVK 168
VYN+L SK + A +F W+E R N T+ ++E R +++ A ++
Sbjct: 15 VYNVL----HSSKTSEHALQFFRWVE-RSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 169 EMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+M K+G+E + ++ +ID + +E M ++ T+ +Y +L K + G
Sbjct: 70 DMPKKGLEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 129
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A + M+S G P+ T+N F GKVE A + M +PD +TY+
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYN 189
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
++ + K++ A + EMK R + + T T LI + + D+A E+M
Sbjct: 190 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGF 249
Query: 349 GLVPHYLTFKRL-----NDEFKKRGMTALAQKLCNVMSSVPRS--MELLDSRCK 395
G+ P+ +T+ L N E L + + ++ S M L+ S CK
Sbjct: 250 GIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCK 303
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 136/306 (44%), Gaps = 25/306 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ + A ++ G + P V T+ LI+ Y V+ A+ E
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVV---TYTTLIKGYVSVDQVDDALRLVEEMK 247
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ N A + LL LC + A ++ +D+ APT ++ L++
Sbjct: 248 GFGIKPN----AITYSTLLPGLCNAEXMSEARVIL--KEMMDKYLAPTDNSIFMRLISSH 301
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
+S N+ A M + +V YG L+E +C+ + D+A++L+ ++ ++ I
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRP 361
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAG 228
EP+A YN +I+ L G+ + ++ + + PT + +L++G+ + G
Sbjct: 362 QSTLHLEPSA--YNPMIEYLCNNGQAXKAETLVRQLXKLGVQDPTALN--TLIRGHSQEG 417
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
+ A ++LK+M+ R + YN + + K + DA MIE+ + PD +
Sbjct: 418 SPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFR 477
Query: 289 ILLKIL 294
+++ L
Sbjct: 478 SVMESL 483
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 4/280 (1%)
Query: 108 TVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR--LRRVDRAIR 165
TV+V+N ++ + RS DA + M + P++V++ TL+ + A+
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L+ E+R+ G+ P+ I YNT+I ++ E+ + E + E P + TY ++V +
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+ G E A ++ + ++ +GF+P TYN F+K G V+ + +++++G+ + +
Sbjct: 340 RCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEI 399
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY+ ++ + K +LDLA+ + EM+ GC D T T++I L +M + EA EDM
Sbjct: 400 TYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDM 459
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKL--CNVMSSV 383
GL P + F L + K G A A+ C + S V
Sbjct: 460 TDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGV 499
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 160/363 (44%), Gaps = 38/363 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAI---WTF 56
M+ V A++ FD A LLD + + PD VS F LI +++G + A + F
Sbjct: 227 MMGVYARSGRFDDAR-QLLDTMHDRGIDPDLVS---FNTLINARSKSGCLAAGVALDLLF 282
Query: 57 EFANN---------------LDMVKNFDSGASLFEILLDSLCK------------QGRVK 89
E + N + ++FE ++ S C+ GR
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342
Query: 90 AASEYFHKRKEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A E +EL ++ + P YN LL + + NV E ++ K N +TY
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 149 TLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
T++ Y ++ R+D A+ L EMR G P+A+ Y +ID L + R E ++E
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
PT++ +++L+ Y K G A MI+ G P Y F++ G E
Sbjct: 463 GLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKM 522
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLD-TSTMLIH 327
+ LYRKM+ Y PD Y +LL L KEDK + +V ++M+ C ++L STMLI
Sbjct: 523 LCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELL-CRMNLGIISTMLIK 581
Query: 328 LLC 330
C
Sbjct: 582 ARC 584
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 4/299 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD--AERF 131
+F ++ + GR A + D+ P + +N L+N +S + A
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMH--DRGIDPDLVSFNTLINARSKSGCLAAGVALDL 280
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
E+R+ + P+V+TY TL+ + ++ A+ + ++M P+ YN ++
Sbjct: 281 LFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGR 340
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ EE + + P +TY SL+ + K G+++ + ++ GF + T
Sbjct: 341 CGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEIT 400
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + K G+++ A+ LY +M G TPD +TY +++ L K +++ A +V ++M
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G L + LI + + +A F+ MI G+ P L + + D F + G T
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDT 519
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 158/369 (42%), Gaps = 48/369 (13%)
Query: 29 DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRV 88
D +S+ + ++L R+ + +I +E + M+K +L+E L+ L +
Sbjct: 639 DLISECSIMLLCRK-------QTSISAYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEFF 691
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYG 148
A + F + + + ++ Y +++ + + + A R + + + N+++
Sbjct: 692 SEACQVFCDMQFIGIEASKSI--YESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCR 749
Query: 149 TLV-EGYCRLRRVDRAIRLVKEMRK-EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
++ E Y +++ +A LVK +R+ GI+ ++N +I E+G +E+ + + +
Sbjct: 750 VIIIEAYGKIKLWQQAEILVKGLRQASGIDRR--IWNALIHAYAESGLYEKARAVFDNMI 807
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P PT+ + +++ G L+ +++ + F S +T F+K G V
Sbjct: 808 KTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVF 867
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL-----------------DLAI----- 304
+ M +Y M +GY P+ Y ++ +LC ++ DLAI
Sbjct: 868 EVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALL 927
Query: 305 -------------QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
QV + + G + D DT LI + CR ++ +E +M +RGL
Sbjct: 928 NMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLT 987
Query: 352 PHYLTFKRL 360
P ++K L
Sbjct: 988 PKLQSYKSL 996
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 134/331 (40%), Gaps = 8/331 (2%)
Query: 39 LIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKR 98
LI YA +G+ E A F+ + DS ++ +L GR+ E +
Sbjct: 786 LIHAYAESGLYEKARAVFDNMIKTGPLPTVDS----VNGMMRALIVDGRL---DELYVVV 838
Query: 99 KEL-DQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+EL D ++ + +LL+ + ++ +V + + + M+ PN+ Y +++ C
Sbjct: 839 EELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHH 898
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
R ++ EM G +P+ + N +++ AG F+ + + L P TY
Sbjct: 899 NRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTY 958
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+L+ YC++ E +L M RG P +Y +K E A ++ +M
Sbjct: 959 NTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRS 1018
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
Y +R YH+++KI A + MK G + + T +L+ + E
Sbjct: 1019 KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPRE 1078
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
A ++ L L + + D + K G
Sbjct: 1079 AENVLNNLKSSSLEVSTLPYSTVFDAYLKNG 1109
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 117/280 (41%), Gaps = 8/280 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV N ++ + + E++ N + T L++ + + V +++
Sbjct: 813 PTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKI 872
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
M+ G PN +Y ++I L RF +V M+ P + +L+ Y
Sbjct: 873 YNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTA 932
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
AG+ + +++ + ++ G P TYN + + + E+ L +M + G TP +
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y LL K + + A Q+ +EM+ + ++ + H++ ++Y+ ++ E+++
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRS----IYHMMMKIYRNAGNHSKAENLL 1048
Query: 347 ----RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
G+ P T L + G A+ + N + S
Sbjct: 1049 AVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKS 1088
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P ++ Y LL +++ + A++ + EMR ++ N Y +++ Y +A L
Sbjct: 988 PKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENL 1047
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ M+++GIEP + ++ AG+ E ++ + + Y+++ Y K
Sbjct: 1048 LAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLK 1107
Query: 227 AGDL-EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT-PDR 284
GD G +K+L+M G P + F R S + DA+ L + + + G+ P R
Sbjct: 1108 NGDYNHGTTKLLEMK-RDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFDLPIR 1166
Query: 285 L 285
L
Sbjct: 1167 L 1167
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 164/339 (48%), Gaps = 18/339 (5%)
Query: 18 LLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF----EFANNLDMVKNFDSGAS 73
L D+I ++ F +L+ RYA A V+ AI F ++ LD+V
Sbjct: 168 LFDEIPMESRQSVITNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVG------- 220
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F+ILL SLC+ V+ A F ++K+ + P ++ +NI+LNGW ++ DA+R W
Sbjct: 221 -FQILLMSLCRYKHVEEAEALFLQKKD---EFPPVIKSWNIILNGWCVKGSLADAKRVWN 276
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E+ + P++ TYGT + + ++ A++L M ++GI P+ + N +ID L
Sbjct: 277 EIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKK 336
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R E + + TY +L+K +CK +E ++L M +G P+ TY+
Sbjct: 337 RIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYS 396
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
Y + K +D ++L ++M +SG D TY+++L + D V EM+
Sbjct: 397 YILKTTEK---PKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERN 453
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
G D + T+++H L K DEA + M RG+ P
Sbjct: 454 GSGPDQRSFTIMVHGLHSHGKLDEALHYYRTMESRGMTP 492
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 25/354 (7%)
Query: 32 SKDTFVILIRRY--ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ-GRV 88
SKD V I + +R G E A +F++ +D +++L L KQ
Sbjct: 78 SKDVHVSEIVKILKSRDGDSELAEVLNQFSDEMDE-----------DVVLKVLQKQRSNW 126
Query: 89 KAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT-- 146
K A +F L Q + R Y +L+ R K V+ + + E+ E+ +V+T
Sbjct: 127 KVALSFFKWAAGLPQ-YNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMES-RQSVITNR 184
Query: 147 -YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
+ L+ Y +V AI + + + G E + + + ++ L EE + F
Sbjct: 185 MFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEAL---F 241
Query: 206 LVC--EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L E P + ++ ++ G+C G L A ++ +I+ P TY F +K G
Sbjct: 242 LQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSG 301
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K+ A+ L+ M E G PD + ++ LC + ++ A+++ EM RGC D+ T
Sbjct: 302 KLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYN 361
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR-LNDEFKKRGMTALAQKL 376
LI C++ + ++ +DM +G+ P+ +T+ L K + + +L Q++
Sbjct: 362 TLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRM 415
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 169/377 (44%), Gaps = 18/377 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + + A +L D + PD V T+ IL+ + A+ +
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVV---TYNILLEATCKGRGYRQAMELIDLMR 229
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N + + +L+D +C +G V A E R P+ YN +L G
Sbjct: 230 AEGCTPNNVT----YNVLMDGMCGEGDVDDALELL--RNLPSHGCKPSTVNYNTVLKGLC 283
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ DA+ EM +EN PN T+ ++ CR + +AI+L+++M K G N +
Sbjct: 284 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 343
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I+GL E + G++ + P +VTY +L+KG C A A +++ M
Sbjct: 344 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNM 403
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G LP T+N + + G + DA+ ++++M + G TP+ +TY ++ L K KL
Sbjct: 404 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 463
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR----GLVPHYLT 356
D A+++ EM +G + D + LL D+ E +R+ G+ PH +
Sbjct: 464 DQALELFNEMGHKGFNPD-----KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 518
Query: 357 FKRLNDEFKKRGMTALA 373
+ + + G T A
Sbjct: 519 YNAILLGLCRNGKTEFA 535
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 151/330 (45%), Gaps = 40/330 (12%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L+ +LC++G+V+ A L + AP V YNILL + + + A
Sbjct: 167 AYTYNPLIHTLCERGQVRDALSVLDDM--LCRGCAPDVVTYNILLEATCKGRGYRQAMEL 224
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
MR E TPN VTY L++G C VD A+ L++ + G +P+ + YNTV+ GL
Sbjct: 225 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 284
Query: 192 AGRFEEVSGMMERFL--VCEPG---------------------------------PTMVT 216
A R+ + ++ L C P +VT
Sbjct: 285 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 344
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI 276
Y +++ G C+ +++GA +L M S G P TYN + + DA L M
Sbjct: 345 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT 404
Query: 277 ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD 336
++G PD +T++ L+ LC++ + AI+V K+M +GC + T + +I L + K D
Sbjct: 405 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 464
Query: 337 EASAEFEDMIRRGLVP---HYLTFKRLNDE 363
+A F +M +G P + L + LND+
Sbjct: 465 QALELFNEMGHKGFNPDKIYQLLAECLNDD 494
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 6/254 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + N L+ R DAER + VV YG L +GYCR R+ A R+
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRV 157
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
V M ++PNA YN +I L E G+ + +++ L P +VTY L++ CK
Sbjct: 158 VGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
A +++ +M + G P+ TYN G V+DA+ L R + G P +
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ +LK LC ++ A ++ EM C + T ++I+ LCR +A E M
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334
Query: 347 RRGLVPHYLTFKRL 360
+ G + +T+ +
Sbjct: 335 KHGCTANIVTYNAI 348
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N + F +++ SLC++G ++ A + K + + YN ++NG +NV
Sbjct: 301 ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK--HGCTANIVTYNAIINGLCEQRNV 358
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
A +M+ P++VTY TL++G C + A L+ M + G P+ + +NT+
Sbjct: 359 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTL 418
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
I L + G + + ++ P +TY++++ G KA L+ A ++ M +GF
Sbjct: 419 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 478
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P Y + +E+A+ RK+ +SG +P + Y+ +L LC+ K + AI
Sbjct: 479 NPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
+ M GC D T +LI L +EA
Sbjct: 538 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 570
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+ LV CR R D A R+V G + Y + DG AGR + +
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRV 157
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ V P TY L+ C+ G + A +L M+ RG P TYN K
Sbjct: 158 VGGMPV---QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
AM L M G TP+ +TY++L+ +C E +D A+++ + + GC
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
++ LC ++ +A +M+R P+ TF + ++G+ A +L MS
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 40/275 (14%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF ++I R G+++ AI E + N + + +++ LC+Q V A
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT----YNAIINGLCEQRNVDGAMGL 364
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
K K P + YN LL G + DAE M + P+ VT+ TL+
Sbjct: 365 LSKMKSY--GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 422
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF------------------- 195
C+ + AI + K+M +G PN+I Y+T+I GL +A +
Sbjct: 423 CQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK 482
Query: 196 ---------------EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
EE + + P V Y +++ G C+ G E A I+ M
Sbjct: 483 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 542
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+S G +P TY + G + +A L K+
Sbjct: 543 VSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 14/248 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIW--TFEF 58
+I L + + D A LL PD V+ +T + G+ AA W E
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLL--------KGLCSAAQWVDAEEL 399
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+N+ + F L+ LC++G + A E F + D+ P Y+ +++G
Sbjct: 400 MDNMTQNGCLPDNVT-FNTLIGFLCQKGLMVDAIEVFKQMP--DKGCTPNSITYSTIISG 456
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
++ + A + EM + P+ + Y L E ++ AI+ V++++ GI P+
Sbjct: 457 LAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPH 515
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
++YN ++ GL G+ E +M + P +TY L++G G L A ++L
Sbjct: 516 TVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 575
Query: 239 MMISRGFL 246
+ SR L
Sbjct: 576 KLCSRDVL 583
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 163/348 (46%), Gaps = 6/348 (1%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+++R G+VE + E V N A + +L+D C++G V +
Sbjct: 264 VMVRGLCLEGLVEKGLKLIEARWGAGCVPN----AVFYNVLIDGYCRRGDVGRGILLLGE 319
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
+ + PTV Y L++ R +++ EMR+ + PNV Y ++++ C+
Sbjct: 320 MEA--KGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKC 377
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
R +A+ ++K+M G +P+AI ++T+I GL + GR +E ++ E P + +Y
Sbjct: 378 RSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSY 437
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
TSL+ G+C G++ AS +L M+ RG P T+ G+V +A+ + KM
Sbjct: 438 TSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAA 497
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
PD Y++L+ LCK+ L A + +EM + D T LI R DE
Sbjct: 498 RQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDE 557
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPR 385
A FE M ++G+ P + + + + + GM A + + M V R
Sbjct: 558 ARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGR 605
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 142/301 (47%), Gaps = 7/301 (2%)
Query: 69 DSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILLNGWFRSKNVK 126
D A F L+ LC++GRV+ A + R EL+ P + Y L++G+ V
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN----PNLSSYTSLIHGFCVRGEVI 451
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A +EM + TP+VVT+G L+ G +V A+ + ++M + P+A +YN +I
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLI 511
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
GL + ++E L P YT+L+ G+ + L+ A KI + M +G
Sbjct: 512 SGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIH 571
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P YN + + +FG + +A+ M + G PD TY L+ K+ + A+ +
Sbjct: 572 PDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSL 631
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL-NDEFK 365
+M R C ++ + LI+ C++ D A F M +GL P+ +T+ L FK
Sbjct: 632 LCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFK 691
Query: 366 K 366
K
Sbjct: 692 K 692
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 25/352 (7%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
GH PD V TF LI AG V A+ E ++ + A+++ +L+ LC
Sbjct: 464 GH-TPDVV---TFGALIHGLVVAGQVSEALLVREKMAARQLLPD----ANIYNVLISGLC 515
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
K+ + AA + L+Q+ P VY L++G+ R++++ +A + + M ++ + P+
Sbjct: 516 KKKMLPAARNLIEEM--LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPD 573
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
VV Y +++GYC+ ++ A+ + MRK G P+ Y T+I G + G ++
Sbjct: 574 VVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLC 633
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ P +V Y+SL+ GYCK GD + A + M S+G P+ TY K
Sbjct: 634 DMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKD 693
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG--------- 314
KV A + M+ + +P+ T H L+ LC ++ S + G
Sbjct: 694 KVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFR 753
Query: 315 ------CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
CD +I LC EA M +G P TF L
Sbjct: 754 ALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSL 805
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 162/383 (42%), Gaps = 21/383 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K + A +L G PD + TF LI + G V+ A
Sbjct: 370 VIDALCKCRSASQALVVLKQMFAGGCDPDAI---TFSTLISGLCQEGRVQEAERLLRETT 426
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ N S + L+ C +G V AS + E + P V + L++G
Sbjct: 427 RWELNPNLSS----YTSLIHGFCVRGEVIVASNLLVEMME--RGHTPDVVTFGALIHGLV 480
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ V +A +M + P+ Y L+ G C+ + + A L++EM ++ + P+
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
VY T+IDG + +E + E P +V Y +++KGYC+ G + A + + M
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G +P TY ++K G + A++L M++ P+ + Y L+ CK
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDT 660
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A + M+ +G ++ T T+LI L + K A+ FE M+ P+ T
Sbjct: 661 DAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLH-- 718
Query: 361 NDEFKKRGMTALAQKLCNVMSSV 383
+L LCN M+S+
Sbjct: 719 ----------SLVTGLCNSMASI 731
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 139/307 (45%), Gaps = 3/307 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ L ++G ++ + + +E + P V++YN +++ + ++ A +
Sbjct: 332 YGTLMSWLGRKGDLEKIASLLSEMRE--RRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M P+ +T+ TL+ G C+ RV A RL++E + + PN Y ++I G G
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
S ++ + P +VT+ +L+ G AG + A + + M +R LP YN
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + A NL +M+E PD+ Y L+ + + LD A ++ + M+ +G
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG-MTALA 373
D+ +I C+ +EA M + G +P T+ L + K+G ++
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629
Query: 374 QKLCNVM 380
LC++M
Sbjct: 630 SLLCDMM 636
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 142/329 (43%), Gaps = 16/329 (4%)
Query: 39 LIRRYARAG---MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
L+R ARAG V+A + A V +L D+ G A+E
Sbjct: 156 LLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADA----GMEAKAAEMC 211
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +E P N LL + DA + + EM E + + +V G C
Sbjct: 212 QRARE-HHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLC 270
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV---EAGRFEEVSGMME-RFLVCEPG 211
V++ ++L++ G PNA+ YN +IDG + GR + G ME + L+
Sbjct: 271 LEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLL---- 326
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
PT+VTY +L+ + GDLE + +L M R P+ YN K A+ +
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
++M G PD +T+ L+ LC+E ++ A ++ +E + +L + T LIH C
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ AS +M+ RG P +TF L
Sbjct: 447 RGEVIVASNLLVEMMERGHTPDVVTFGAL 475
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 126/314 (40%), Gaps = 24/314 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K +A L+ + + + PD K + LI + R ++ A FEF
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPD---KYVYTTLIDGFIRNESLDEARKIFEFME 566
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
K + ++ C+ G + A E +++ + P Y L+ G+
Sbjct: 567 Q----KGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGR--IPDEFTYTTLIGGYA 620
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ A +M K PNVV Y +L+ GYC+L D A L M +G+ PN I
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG------------ 228
Y +I L + + + E L+ + P T SLV G C +
Sbjct: 681 TYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740
Query: 229 DLEGASKIL---KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
+L G +L + +++ P + YN + +A++L KM GY PD
Sbjct: 741 NLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSA 800
Query: 286 TYHILLKILCKEDK 299
T+ LL C K
Sbjct: 801 TFLSLLYGFCSVGK 814
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 36/273 (13%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEV 198
P G LV Y +A + + R+ G P A N ++ LVE R+++
Sbjct: 184 AVPTRACLGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDA 243
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM------------------- 239
+ + L E G + +V+G C G +E K+++
Sbjct: 244 RKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDG 303
Query: 240 ----------------MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
M ++G LP+ TY + + G +E +L +M E P+
Sbjct: 304 YCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPN 363
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
Y+ ++ LCK A+ V K+M GCD D T + LI LC+ + EA
Sbjct: 364 VQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLR 423
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ R L P+ ++ L F RG +A L
Sbjct: 424 ETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 21/389 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L K + + A L PD V T+ LI + + G+++ I FE
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIV---TYNSLIDGHGKLGLLDECICIFEQMK 118
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ D D + L++ CK R+ A E+ H+ K P V Y+ ++ +
Sbjct: 119 DADC----DPDVITYNALINCFCKFERMPKAFEFLHEMKA--NGLKPNVVTYSTFIDAFC 172
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +++A +F+++MR+ +TPN TY +L++ C+ + A++LV+E+ + GI+ N +
Sbjct: 173 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 232
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL E GR +E + L P TYT+LV G+ KA ++E A ILK M
Sbjct: 233 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 292
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ P Y ++E+A L ++ ESG + + Y L+ K +
Sbjct: 293 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A+ + +EM LD L+ LC+ F+ A F++M+ +G++P + + L
Sbjct: 353 TEALTLLEEM--------LD----LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 400
Query: 361 NDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
D K G A L + M + ++L
Sbjct: 401 IDGNMKHGNLQEALNLRDRMIEIGMELDL 429
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D LCK+G ++ A F + KE + P + YN L++G + + + + +
Sbjct: 59 YNIMIDYLCKEGDLEMARSLFTQMKE--AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 116
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + P+V+TY L+ +C+ R+ +A + EM+ G++PN + Y+T ID + G
Sbjct: 117 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E P TYTSL+ CKAG+L A K+++ ++ G + TY
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 236
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G++++A ++R M+ +G P++ TY L+ K +++ A + KEMK +
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 296
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
DL ++ LC + +EA ++ G+ + + + L D + K G A
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356
Query: 375 KLCNVMSSVPRSMELLDSRCKD 396
L M ++L+D CK+
Sbjct: 357 TLLEEM------LDLVDGLCKN 372
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 19/327 (5%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASL----FEILLDSLCK 84
FV + + +++A A L +V+ +G L + LLD LC+
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
+GR+K A E F R L+ AP Y L++G+ ++K ++ A+ EM+++ + P++
Sbjct: 244 EGRMKEAEEVF--RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
+ YGT++ G C R++ A L+ E+++ GI NA++Y T++D ++G+ E ++E
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L LV G CK E A K+ M+ +G +P Y K G
Sbjct: 362 ML------------DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
+++A+NL +MIE G D Y L+ L ++ A + EM +G D
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLV 351
LI + K DEA +M +RG++
Sbjct: 470 LIKKYYALGKVDEALELQNEMAKRGMI 496
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 2/279 (0%)
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
++ ASE F K ++ P R N LL+ + + +F+ +M + +V TY
Sbjct: 2 LEEASECFLKMRKF--RVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTY 59
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+++ C+ ++ A L +M++ G P+ + YN++IDG + G +E + E+
Sbjct: 60 NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
+ P ++TY +L+ +CK + A + L M + G P+ TY+ F F K G +++
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ + M TP+ TY L+ CK L A+++ +E+ G +++ T T L+
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
LC + EA F M+ G+ P+ T+ L F K
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 278
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 41/278 (14%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+++A +L+MRK V P + L+ ++ R D + + K+M GI+ + YN
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+ID L CK GDLE A + M G
Sbjct: 62 MIDYL-----------------------------------CKEGDLEMARSLFTQMKEAG 86
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
F P TYN K G +++ + ++ +M ++ PD +TY+ L+ CK +++ A
Sbjct: 87 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 146
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ EMK G ++ T + I C+ EA F DM R L P+ T+ L D
Sbjct: 147 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 206
Query: 365 KKRGMTALAQKL------CNVMSSVPRSMELLDSRCKD 396
K G A A KL + +V LLD C++
Sbjct: 207 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 183/405 (45%), Gaps = 46/405 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L KA+ D A + + P S T+ LI Y G + + E +
Sbjct: 345 VIDGLCKAQVVDRAKAVFQQMLDKGVKP---SNGTYNCLIHGYLSTGKWKEVVRLLEEMS 401
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ + ++ +LLD LCK GR A F +++ G
Sbjct: 402 THDL----EPDCFIYALLLDYLCKNGRCTEARNIFD----------------SVIRKGIK 441
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI---------------- 164
+ +A + +MR++ ++PNVV YG L++ C+L RVD AI
Sbjct: 442 PDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTV 501
Query: 165 -------RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY 217
LV EM +GI + +V+NT++ L GR E ++E L P +++Y
Sbjct: 502 EKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISY 561
Query: 218 TSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIE 277
+LV G+C G + A+K+L +M+S G P+ TYN + K +++DA +L R+M+
Sbjct: 562 NTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLM 621
Query: 278 SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
+G TPD +TY+ +L L + + A ++ M D+ T ++++ LC+ DE
Sbjct: 622 NGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDE 681
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
A F+ + +GL H +TF + K G A L +S+
Sbjct: 682 AFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISA 726
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 152/332 (45%), Gaps = 36/332 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ--SWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ L+ C + R + A E H + DQ S P V YN ++NG+FR V A +
Sbjct: 269 YNTLVKGFCNENRAEEALELLHVMAD-DQGLSCPPDVVSYNTVINGFFREGQVDKAYNLF 327
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
L+M + P+VVTY T+++G C+ + VDRA + ++M +G++P+ YN +I G +
Sbjct: 328 LQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLST 387
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP----- 247
G+++EV ++E + P Y L+ CK G A I +I +G P
Sbjct: 388 GKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMID 447
Query: 248 --------------SPTTYNY--FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
SP NY K G+V+DA+ + +MI Y
Sbjct: 448 EAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYG---------- 497
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC +K + A ++ EM +G +D+ L+ LCR + EA E M+R G+
Sbjct: 498 --LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVR 555
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
P +++ L D G T A KL +VM S+
Sbjct: 556 PDVISYNTLVDGHCLTGRTDEAAKLLDVMVSI 587
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F L+ LC++GRV A L P V YN L++G + +A +
Sbjct: 525 VFNTLMCDLCREGRVMEAQRLIELM--LRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + PN TY TL+ GYC+ RR+D A L++EM G P+ + YNT++ GL + G
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
RF E + + M TY ++ G CK ++ A K+ + + S+G T+N
Sbjct: 643 RFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFN 702
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
K GK EDAM+L+ + G PD TY ++ + L KE L+
Sbjct: 703 IMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 750
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V P+ TY L+ +CR+ R++ + + K G N IV+N ++ GL +A R +
Sbjct: 188 SDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLD 247
Query: 197 EVSG-MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP---TTY 252
E + ++ R P +V+Y +LVKG+C E A ++L +M L P +Y
Sbjct: 248 EATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSY 307
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N F + G+V+ A NL+ +MI+ G PD +TY+ ++ LCK +D A V ++M
Sbjct: 308 NTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLD 367
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+G T LIH K+ E E+M L P + L D K G
Sbjct: 368 KGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTE 427
Query: 373 AQKLCNVMSSVPR 385
A+ N+ SV R
Sbjct: 428 AR---NIFDSVIR 437
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 116/276 (42%), Gaps = 9/276 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD +S +T L+ + G + A + ++ + N + LL CK R
Sbjct: 556 PDVISYNT---LVDGHCLTGRTDEAAKLLDVMVSIGLKPN----EFTYNTLLHGYCKARR 608
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A Y R+ L P V YN +L+G F++ +A+ +L M ++ TY
Sbjct: 609 IDDA--YSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTY 666
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
++ G C+ VD A ++ + + +G++ + I +N +I L++ G+ E+ +
Sbjct: 667 NIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISA 726
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + TY + + K G LE + M G P+ N R F G +
Sbjct: 727 YGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISR 786
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLA 303
A K+ E ++ + T +L+ + + + LA
Sbjct: 787 AGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLA 822
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 157/328 (47%), Gaps = 10/328 (3%)
Query: 57 EFANNLDMVKNFDS-----GASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV 111
++ L + K DS IL++S C R+ A +L + P+
Sbjct: 25 HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKL--GYQPSTAT 82
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+ L+ G + +A + + +M E P+V+TYGTL+ G C+ R++ A+ L +M
Sbjct: 83 FTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDML 142
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+GI PN Y+++I GL G ++E + + + P +T+ +LV CK G ++
Sbjct: 143 AKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQ 202
Query: 232 GASKILKM---MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
K + + M +G +P TYN G++ DA+ L+ +M+ G PD +TY
Sbjct: 203 IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYR 262
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
IL LCK +L A+ + K ++ D D+ ++++ +CR + + A F + +
Sbjct: 263 ILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSK 322
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKL 376
GL P T+ + + ++G+ A A KL
Sbjct: 323 GLHPDVRTYTIMINGLCQQGLLAEASKL 350
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 140/312 (44%), Gaps = 7/312 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAP-TVRVYNILLNGWFRSKNVKDAERFWL 133
F LL S+ R+K S K++D P NIL+N + + A
Sbjct: 13 FSKLLTSIT---RMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLG 69
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
++ K P+ T+ TL+ G C ++ A++L +M EG +P+ + Y T+I+GL +
Sbjct: 70 DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDR 129
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E + L P TY+SL+ G C G + A ++ MI R +P T+N
Sbjct: 130 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 189
Query: 254 YFFRYFSKFGKVE---DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
K G ++ AM L+ +M + G PD +TY+ L+ LC +L AI + EM
Sbjct: 190 TLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 249
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
G DL T +L LC+ ++ EA + + L P + + D + G
Sbjct: 250 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 309
Query: 371 ALAQKLCNVMSS 382
A+ L + +SS
Sbjct: 310 EAARDLFSKLSS 321
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 9/282 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S TF LIR G + A+ F+ + F + L++ LCK ++ A
Sbjct: 79 STATFTTLIRGLCVEGKIGEALQLFDKMTG----EGFQPDVLTYGTLINGLCKDRQLTEA 134
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
F L + +P Y+ L++G + K+A R + M + P+ +T+ TLV
Sbjct: 135 LSLF--SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 192
Query: 152 EGYCR---LRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVC 208
+ C+ ++ +D+A+ L +EM ++G+ P+ + YNT+I GL GR + + +V
Sbjct: 193 DALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVY 252
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
P +VTY L CK L A +LK++ P Y+ + G++E A
Sbjct: 253 GQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAA 312
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
+L+ K+ G PD TY I++ LC++ L A ++ EM
Sbjct: 313 RDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 38/277 (13%)
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P++V + L+ R++ + L K+M GI N N +I+ R +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ L P+ T+T+L++G C G + A ++ M GF P TY K
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 262 FGKVEDAMNLYRKMIESGYT-----------------------------------PDRLT 286
++ +A++L+ M+ G + PD+LT
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 287 YHILLKILCKEDK---LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
++ L+ LCKE +D A+ + +EM +G D T LIH LC + + +A A F
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247
Query: 344 DMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+M+ G +P +T++ L D K A A L V+
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI 284
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 15/266 (5%)
Query: 18 LLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLF 75
L DK+ G PD ++ T LI + + A+ F DM+ K +
Sbjct: 102 LFDKMTGEGFQPDVLTYGT---LINGLCKDRQLTEALSLFS-----DMLAKGISPNNFTY 153
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAER---FW 132
L+ LC G K A F+ + + P +N L++ + ++ ++ +
Sbjct: 154 SSLIHGLCILGHWKEAIRLFYAM--IHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLF 211
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM ++ + P+ VTY TL+ G C + R+ AI L EM G P+ + Y + D L +
Sbjct: 212 EEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKN 271
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R E +++ P + Y+ ++ G C+AG+LE A + + S+G P TY
Sbjct: 272 HRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTY 331
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIES 278
+ G + +A L+ +M E+
Sbjct: 332 TIMINGLCQQGLLAEASKLFGEMDEN 357
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P++V ++ L+ + + K M S G + T N F ++ A
Sbjct: 6 PPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAF 65
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
++ +++ GY P T+ L++ LC E K+ A+Q+ +M G D+ T LI+ L
Sbjct: 66 SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 125
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
C+ + EA + F DM+ +G+ P+ T+ L
Sbjct: 126 CKDRQLTEALSLFSDMLAKGISPNNFTYSSL 156
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFE----FANNLDMVKNFDSGASLFEILLDSL 82
+PD V+ +T LI G + AI F + D+V + IL D L
Sbjct: 220 IPDTVTYNT---LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT--------YRILFDYL 268
Query: 83 CKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
CK R+ A + LD P + +Y+I+++G R+ ++ A + ++ + +
Sbjct: 269 CKNHRLAEAMVLLKVIEGTNLD----PDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 324
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
P+V TY ++ G C+ + A +L EM + IE
Sbjct: 325 HPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIE 360
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 171/361 (47%), Gaps = 9/361 (2%)
Query: 22 IGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
+G PD TF +LI+ YA GM++ A+ F + + ++ +
Sbjct: 388 LGDGIAPDIY---TFNVLIKAYANCGMLDKAMIIFNEMRD----HGVKPHVVTYMTVIAA 440
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC+ G++ A E F++ +DQ P Y+ L+ G+ ++ A+ E+ +
Sbjct: 441 LCRIGKMDDAMEKFNQM--IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
++V +G+++ C+L RV A + G+ P+A+VYN ++DG G+ E+ +
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 558
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ + P +V Y +LV GYCK G ++ + + M+ +G PS YN +
Sbjct: 559 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 618
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
G+ A + +M ESG ++ TY I+L+ L K D AI + KE++ ID+ T
Sbjct: 619 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 678
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+I + + + +EA F + R GLVP +T+ + K G+ A+ + + M
Sbjct: 679 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQ 738
Query: 382 S 382
+
Sbjct: 739 N 739
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 178/377 (47%), Gaps = 15/377 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA+ D A L + +PD T+ LI Y+ G + A+ F+
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPD---NWTYNNLIYGYSSTGQWKEAVRVFKEMR 318
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++ + + L+ SLCK G++K A + F Q+ P V Y I+LNG+
Sbjct: 319 RQSILPDVVA----LNTLMGSLCKYGKIKEARDVFDTMAMKGQN--PDVFSYTIMLNGYA 372
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ D + M + + P++ T+ L++ Y +D+A+ + EMR G++P+ +
Sbjct: 373 TKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVV 432
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF-LVCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
Y TVI L G+ ++ ME+F + + G P Y L++G+C G L A +++
Sbjct: 433 TYMTVIAALCRIGKMDDA---MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ G + K G+V DA N++ + G PD + Y++L+ C
Sbjct: 490 SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 549
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
K++ A++V M G + ++ L++ C++ + DE + F +M+++G+ P + +
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609
Query: 358 KRLNDEFKKRGMTALAQ 374
+ D + G T A+
Sbjct: 610 NIIIDGLFEAGRTVPAK 626
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 180/377 (47%), Gaps = 27/377 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L + + D A I VPD K + LI+ + G +++A E
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPD---KYAYHCLIQGFCTHGSLLKAKELISEIM 493
Query: 60 NN---LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILL 116
NN LD+V F ++++LCK GRV A F ++ P VYN+L+
Sbjct: 494 NNGMRLDIV--------FFGSIINNLCKLGRVMDAQNIFDL--TVNVGLHPDAVVYNMLM 543
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G+ ++ A R + M + PNVV YGTLV GYC++ R+D + L +EM ++GI+
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM--VTYTSLVKGYCKAGDLEGAS 234
P+ I+YN +IDGL EAGR V ++ + E G M TY+ +++G K + A
Sbjct: 604 PSTILYNIIIDGLFEAGR--TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ K + + T N + +VE+A +L+ + SG P +TY I++ L
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE---ASAEFEDMIRRGLV 351
KE ++ A + M+ GC+ D S +L H++ + K +E A A + R
Sbjct: 722 LKEGLVEEAEDMFSSMQNAGCEPD---SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 778
Query: 352 PHYLTFKRLNDEFKKRG 368
+LT L D F +G
Sbjct: 779 LEHLTAMLLVDLFSSKG 795
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 160/378 (42%), Gaps = 70/378 (18%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ILL SLC QG+ A + E +P V YN +++G+F+ +V A + E
Sbjct: 187 YNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 246
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRA------------------------------- 163
M + + P++VTY ++V C+ R +D+A
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Query: 164 ----IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
+R+ KEMR++ I P+ + NT++ L + G+ +E + + + P + +YT
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS------------------- 260
++ GY G L + + +M+ G P T+N + ++
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 261 ----------------KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
+ GK++DAM + +MI+ G PD+ YH L++ C L A
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
++ E+ G +D+ +I+ LC++ + +A F+ + GL P + + L D +
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546
Query: 365 KKRGMTALAQKLCNVMSS 382
G A ++ + M S
Sbjct: 547 CLVGKMEKALRVFDAMVS 564
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 97 KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCR 156
R + + +PT Y IL++ R+ + A F+ ++ + + + + L++G+C
Sbjct: 101 SRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCE 160
Query: 157 LRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPG 211
+R D A+ ++ E G P+ YN ++ L G+ + M E VC
Sbjct: 161 AKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCS-- 218
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P +V Y +++ G+ K GD+ A + K M+ RG P TY+ K ++ A
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
R+M+ G PD TY+ L+ + A++V KEM+ + D+ L+ LC+
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
K EA F+ M +G P ++ + + + +G
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKG 375
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 140 VTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE-V 198
++P TY L++ R R + A+ ++ + G+ +AI+ + ++ G EA R +E +
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 199 SGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP--TTYNYFF 256
++ R P + +Y L+K C G A +L+MM G + SP YN
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
F K G V A +L+++M++ G PD +TY ++ LCK +D A ++M +G
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
D T LI+ ++ EA F++M R+ ++P + L K G A+ +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 377 CNVMS 381
+ M+
Sbjct: 349 FDTMA 353
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,995,108,196
Number of Sequences: 23463169
Number of extensions: 244068260
Number of successful extensions: 883231
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6968
Number of HSP's successfully gapped in prelim test: 5036
Number of HSP's that attempted gapping in prelim test: 721730
Number of HSP's gapped (non-prelim): 67273
length of query: 396
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 251
effective length of database: 8,957,035,862
effective search space: 2248216001362
effective search space used: 2248216001362
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)